JDM601_4189 6e9ec0777fb06a81d01e994e0f6d4317 1180 Gene3D G3DSA:3.40.50.12780 65 508 6.9E-69 T 12-10-2018 JDM601_4189 6e9ec0777fb06a81d01e994e0f6d4317 1180 SUPERFAMILY SSF56801 45 645 4.06E-94 T 12-10-2018 JDM601_4189 6e9ec0777fb06a81d01e994e0f6d4317 1180 TIGRFAM TIGR01746 Thioester-redct: thioester reductase domain 782 1179 5.7E-90 T 12-10-2018 IPR010080 Thioester reductase-like domain JDM601_4189 6e9ec0777fb06a81d01e994e0f6d4317 1180 SUPERFAMILY SSF47336 654 732 4.19E-12 T 12-10-2018 IPR036736 ACP-like superfamily JDM601_4189 6e9ec0777fb06a81d01e994e0f6d4317 1180 Pfam PF00550 Phosphopantetheine attachment site 659 724 2.4E-10 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain JDM601_4189 6e9ec0777fb06a81d01e994e0f6d4317 1180 SMART SM00823 Phosphopantetheine attachment site 656 728 5.6E-6 T 12-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 JDM601_4189 6e9ec0777fb06a81d01e994e0f6d4317 1180 Gene3D G3DSA:1.10.1200.10 652 737 3.2E-10 T 12-10-2018 IPR036736 ACP-like superfamily JDM601_4189 6e9ec0777fb06a81d01e994e0f6d4317 1180 ProSitePatterns PS00455 Putative AMP-binding domain signature. 252 263 - T 12-10-2018 IPR020845 AMP-binding, conserved site JDM601_4189 6e9ec0777fb06a81d01e994e0f6d4317 1180 Pfam PF07993 Male sterility protein 785 1046 8.1E-57 T 12-10-2018 IPR013120 Male sterility, NAD-binding Reactome: R-HSA-8848584 JDM601_4189 6e9ec0777fb06a81d01e994e0f6d4317 1180 Gene3D G3DSA:3.40.50.720 749 1180 7.3E-122 T 12-10-2018 JDM601_4189 6e9ec0777fb06a81d01e994e0f6d4317 1180 Pfam PF00501 AMP-binding enzyme 83 514 2.4E-68 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 JDM601_4189 6e9ec0777fb06a81d01e994e0f6d4317 1180 SUPERFAMILY SSF51735 781 1101 5.91E-30 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_1175 cdb43527e2c94a09c6d44da8743ed567 141 Pfam PF05423 Mycobacterium membrane protein 6 141 3.0E-53 T 12-10-2018 IPR008693 Transport accessory protein MmpS JDM601_1175 cdb43527e2c94a09c6d44da8743ed567 141 Gene3D G3DSA:2.60.40.2880 53 141 4.8E-32 T 12-10-2018 IPR038468 Transport accessory protein MmpS, soluble domain superfamily JDM601_1320 7ee8d7fd096f3f897ce3417cd07ac8cd 501 Gene3D G3DSA:3.30.310.20 205 320 1.9E-23 T 12-10-2018 IPR037046 DNA-3-methyladenine glycosylase AlkA, N-terminal domain superfamily JDM601_1320 7ee8d7fd096f3f897ce3417cd07ac8cd 501 Pfam PF02805 Metal binding domain of Ada 8 71 1.1E-28 T 12-10-2018 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 JDM601_1320 7ee8d7fd096f3f897ce3417cd07ac8cd 501 Gene3D G3DSA:1.10.340.30 323 436 1.9E-26 T 12-10-2018 JDM601_1320 7ee8d7fd096f3f897ce3417cd07ac8cd 501 SUPERFAMILY SSF57884 3 81 3.27E-32 T 12-10-2018 IPR035451 Ada-like domain superfamily JDM601_1320 7ee8d7fd096f3f897ce3417cd07ac8cd 501 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 326 467 3.0E-5 T 12-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 JDM601_1320 7ee8d7fd096f3f897ce3417cd07ac8cd 501 SUPERFAMILY SSF55945 206 301 5.18E-24 T 12-10-2018 JDM601_1320 7ee8d7fd096f3f897ce3417cd07ac8cd 501 Gene3D G3DSA:1.10.1670.10 438 491 7.4E-14 T 12-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 JDM601_1320 7ee8d7fd096f3f897ce3417cd07ac8cd 501 SUPERFAMILY SSF46689 137 185 3.05E-7 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JDM601_1320 7ee8d7fd096f3f897ce3417cd07ac8cd 501 SUPERFAMILY SSF48150 310 485 2.09E-42 T 12-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 JDM601_1320 7ee8d7fd096f3f897ce3417cd07ac8cd 501 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 137 179 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 JDM601_1320 7ee8d7fd096f3f897ce3417cd07ac8cd 501 SMART SM01009 205 320 1.1E-49 T 12-10-2018 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal JDM601_1320 7ee8d7fd096f3f897ce3417cd07ac8cd 501 SMART SM00342 100 183 1.1E-17 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 JDM601_1320 7ee8d7fd096f3f897ce3417cd07ac8cd 501 Pfam PF06029 AlkA N-terminal domain 206 320 3.5E-31 T 12-10-2018 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal JDM601_1320 7ee8d7fd096f3f897ce3417cd07ac8cd 501 Gene3D G3DSA:3.40.10.10 2 73 7.0E-29 T 12-10-2018 IPR035451 Ada-like domain superfamily JDM601_1320 7ee8d7fd096f3f897ce3417cd07ac8cd 501 SMART SM00478 330 487 1.6E-25 T 12-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 JDM601_1320 7ee8d7fd096f3f897ce3417cd07ac8cd 501 Pfam PF12833 Helix-turn-helix domain 106 184 2.4E-17 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 JDM601_1320 7ee8d7fd096f3f897ce3417cd07ac8cd 501 Gene3D G3DSA:1.10.10.60 86 190 6.6E-17 T 12-10-2018 JDM601_1792 02b07ccebc5a589f4d8a88e92e7bfa36 129 Gene3D G3DSA:3.40.50.1010 1 122 3.6E-23 T 12-10-2018 JDM601_1792 02b07ccebc5a589f4d8a88e92e7bfa36 129 SUPERFAMILY SSF88723 1 119 1.35E-15 T 12-10-2018 IPR029060 PIN-like domain superfamily JDM601_1792 02b07ccebc5a589f4d8a88e92e7bfa36 129 Pfam PF01850 PIN domain 2 118 5.3E-11 T 12-10-2018 IPR002716 PIN domain JDM601_1792 02b07ccebc5a589f4d8a88e92e7bfa36 129 Hamap MF_00265 tRNA(fMet)-specific endonuclease VapC [vapC]. 2 127 11.816 T 12-10-2018 IPR022907 VapC family GO:0004540 JDM601_3934 e28126707d6ae89f77e086412d632876 782 Gene3D G3DSA:3.40.50.300 44 256 3.1E-31 T 12-10-2018 JDM601_3934 e28126707d6ae89f77e086412d632876 782 Pfam PF00271 Helicase conserved C-terminal domain 303 409 3.3E-10 T 12-10-2018 IPR001650 Helicase, C-terminal JDM601_3934 e28126707d6ae89f77e086412d632876 782 TIGRFAM TIGR03817 DECH_helic: helicase/secretion neighborhood putative DEAH-box helicase 22 775 0.0 T 12-10-2018 IPR022307 DEAD/DEAH-box helicase, putative, actinobacteria JDM601_3934 e28126707d6ae89f77e086412d632876 782 SUPERFAMILY SSF52540 70 420 1.84E-37 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_3934 e28126707d6ae89f77e086412d632876 782 SMART SM00490 331 409 4.0E-13 T 12-10-2018 IPR001650 Helicase, C-terminal JDM601_3934 e28126707d6ae89f77e086412d632876 782 Pfam PF00270 DEAD/DEAH box helicase 61 238 3.0E-18 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 JDM601_3934 e28126707d6ae89f77e086412d632876 782 Gene3D G3DSA:3.40.50.300 287 437 1.8E-18 T 12-10-2018 JDM601_3934 e28126707d6ae89f77e086412d632876 782 Pfam PF09369 Domain of unknown function (DUF1998) 667 748 2.1E-17 T 12-10-2018 IPR018973 DEAD/DEAH-box helicase, putative JDM601_3934 e28126707d6ae89f77e086412d632876 782 SMART SM00487 54 269 3.0E-23 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain JDM601_1058 ba874f8a95de11e7c6f97398cab127cc 415 Pfam PF13742 OB-fold nucleic acid binding domain 15 108 3.1E-13 T 12-10-2018 IPR025824 OB-fold nucleic acid binding domain GO:0003676 JDM601_1058 ba874f8a95de11e7c6f97398cab127cc 415 Pfam PF02601 Exonuclease VII, large subunit 132 343 1.6E-60 T 12-10-2018 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 JDM601_1058 ba874f8a95de11e7c6f97398cab127cc 415 Pfam PF02601 Exonuclease VII, large subunit 324 406 3.0E-7 T 12-10-2018 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 JDM601_1058 ba874f8a95de11e7c6f97398cab127cc 415 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 8 409 24.754 T 12-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 JDM601_1058 ba874f8a95de11e7c6f97398cab127cc 415 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 16 407 6.0E-110 T 12-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 JDM601_2694 60ae00e0593154e8ec15be7e4b3edbf3 482 Gene3D G3DSA:3.40.50.620 1 242 1.9E-91 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JDM601_2694 60ae00e0593154e8ec15be7e4b3edbf3 482 SUPERFAMILY SSF48163 314 477 3.27E-33 T 12-10-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 JDM601_2694 60ae00e0593154e8ec15be7e4b3edbf3 482 Gene3D G3DSA:1.10.1160.10 246 329 2.7E-29 T 12-10-2018 IPR020061 Glutamine-tRNA ligase, alpha-bundle domain superfamily GO:0005524 JDM601_2694 60ae00e0593154e8ec15be7e4b3edbf3 482 Hamap MF_00022 Glutamate--tRNA ligase [gltX]. 1 478 29.512 T 12-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 JDM601_2694 60ae00e0593154e8ec15be7e4b3edbf3 482 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 1 317 3.1E-74 T 12-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 JDM601_2694 60ae00e0593154e8ec15be7e4b3edbf3 482 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 1 475 5.9E-121 T 12-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 JDM601_2694 60ae00e0593154e8ec15be7e4b3edbf3 482 SUPERFAMILY SSF52374 1 313 4.83E-96 T 12-10-2018 JDM601_2694 60ae00e0593154e8ec15be7e4b3edbf3 482 Gene3D G3DSA:3.90.800.10 70 189 1.9E-91 T 12-10-2018 JDM601_2694 60ae00e0593154e8ec15be7e4b3edbf3 482 Gene3D G3DSA:1.10.8.70 330 381 8.1E-29 T 12-10-2018 IPR020752 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 1 GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 JDM601_2694 60ae00e0593154e8ec15be7e4b3edbf3 482 PRINTS PR00987 Glutamyl-tRNA synthetase signature 33 46 3.8E-22 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 JDM601_2694 60ae00e0593154e8ec15be7e4b3edbf3 482 PRINTS PR00987 Glutamyl-tRNA synthetase signature 188 198 3.8E-22 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 JDM601_2694 60ae00e0593154e8ec15be7e4b3edbf3 482 PRINTS PR00987 Glutamyl-tRNA synthetase signature 204 212 3.8E-22 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 JDM601_2694 60ae00e0593154e8ec15be7e4b3edbf3 482 PRINTS PR00987 Glutamyl-tRNA synthetase signature 4 16 3.8E-22 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 JDM601_2694 60ae00e0593154e8ec15be7e4b3edbf3 482 PRINTS PR00987 Glutamyl-tRNA synthetase signature 18 29 3.8E-22 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 JDM601_2694 60ae00e0593154e8ec15be7e4b3edbf3 482 Gene3D G3DSA:1.10.10.350 382 481 4.7E-26 T 12-10-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 JDM601_3598 10e3f4746f73d57380b87fa2c7e144ac 262 PIRSF PIRSF000103 1 262 2.1E-56 T 12-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 JDM601_3598 10e3f4746f73d57380b87fa2c7e144ac 262 SUPERFAMILY SSF48179 141 254 1.13E-17 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 JDM601_3598 10e3f4746f73d57380b87fa2c7e144ac 262 Gene3D G3DSA:3.40.50.720 3 141 1.0E-35 T 12-10-2018 JDM601_3598 10e3f4746f73d57380b87fa2c7e144ac 262 SUPERFAMILY SSF51735 5 141 1.9E-29 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_3598 10e3f4746f73d57380b87fa2c7e144ac 262 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 143 250 2.3E-12 T 12-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 JDM601_3598 10e3f4746f73d57380b87fa2c7e144ac 262 Gene3D G3DSA:1.10.1040.10 142 262 9.9E-45 T 12-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 JDM601_3598 10e3f4746f73d57380b87fa2c7e144ac 262 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 7 139 1.3E-32 T 12-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 JDM601_3068 9b316326096edf962828adffda25543c 136 Pfam PF13411 MerR HTH family regulatory protein 14 79 2.1E-18 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 JDM601_3068 9b316326096edf962828adffda25543c 136 SMART SM00422 14 82 8.4E-27 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 JDM601_3068 9b316326096edf962828adffda25543c 136 Gene3D G3DSA:1.10.1660.10 11 85 2.0E-22 T 12-10-2018 JDM601_3068 9b316326096edf962828adffda25543c 136 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 49 69 5.8E-8 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 JDM601_3068 9b316326096edf962828adffda25543c 136 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 15 26 5.8E-8 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 JDM601_3068 9b316326096edf962828adffda25543c 136 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 26 39 5.8E-8 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 JDM601_3068 9b316326096edf962828adffda25543c 136 Gene3D G3DSA:1.20.5.170 86 129 1.0E-7 T 12-10-2018 JDM601_3068 9b316326096edf962828adffda25543c 136 SUPERFAMILY SSF46955 14 111 1.33E-21 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily JDM601_1165 716138047e96158f30afc490b7720014 376 Pfam PF12484 Polymorphic PE/PPE proteins C terminal 293 371 2.2E-19 T 12-10-2018 IPR022171 PPE family, C-terminal JDM601_1165 716138047e96158f30afc490b7720014 376 SUPERFAMILY SSF140459 4 176 1.54E-58 T 12-10-2018 JDM601_1165 716138047e96158f30afc490b7720014 376 Gene3D G3DSA:1.20.1260.20 3 176 2.1E-63 T 12-10-2018 IPR038332 PPE superfamily JDM601_1165 716138047e96158f30afc490b7720014 376 Pfam PF00823 PPE family 7 163 3.5E-56 T 12-10-2018 IPR000030 PPE family JDM601_1524 e78bf98df5159b560d1cd8a45fccb92d 329 Pfam PF09990 Predicted membrane protein (DUF2231) 95 182 1.9E-7 T 12-10-2018 IPR019251 Domain of unknown function DUF2231, transmembrane JDM601_1524 e78bf98df5159b560d1cd8a45fccb92d 329 Gene3D G3DSA:2.102.10.10 192 296 9.4E-28 T 12-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 JDM601_1524 e78bf98df5159b560d1cd8a45fccb92d 329 Pfam PF00355 Rieske [2Fe-2S] domain 195 281 6.6E-19 T 12-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 JDM601_1524 e78bf98df5159b560d1cd8a45fccb92d 329 SUPERFAMILY SSF50022 189 294 1.01E-28 T 12-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 JDM601_0639 c71de0520e87ef875e76208a023351d8 532 Hamap MF_00072 Peptide chain release factor 3 [prfC]. 4 528 47.437 T 12-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 JDM601_0639 c71de0520e87ef875e76208a023351d8 532 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 58 73 - T 12-10-2018 IPR031157 Tr-type G domain, conserved site JDM601_0639 c71de0520e87ef875e76208a023351d8 532 SUPERFAMILY SSF50447 264 393 1.24E-22 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily JDM601_0639 c71de0520e87ef875e76208a023351d8 532 TIGRFAM TIGR00503 prfC: peptide chain release factor 3 8 526 1.7E-155 T 12-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 JDM601_0639 c71de0520e87ef875e76208a023351d8 532 PRINTS PR00315 GTP-binding elongation factor signature 65 73 6.0E-10 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JDM601_0639 c71de0520e87ef875e76208a023351d8 532 PRINTS PR00315 GTP-binding elongation factor signature 106 117 6.0E-10 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JDM601_0639 c71de0520e87ef875e76208a023351d8 532 PRINTS PR00315 GTP-binding elongation factor signature 142 151 6.0E-10 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JDM601_0639 c71de0520e87ef875e76208a023351d8 532 PRINTS PR00315 GTP-binding elongation factor signature 15 28 6.0E-10 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JDM601_0639 c71de0520e87ef875e76208a023351d8 532 PRINTS PR00315 GTP-binding elongation factor signature 90 100 6.0E-10 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JDM601_0639 c71de0520e87ef875e76208a023351d8 532 SUPERFAMILY SSF54980 395 468 4.32E-9 T 12-10-2018 IPR035647 EF-G domain III/V-like JDM601_0639 c71de0520e87ef875e76208a023351d8 532 Pfam PF16658 Class II release factor RF3, C-terminal domain 389 514 2.4E-38 T 12-10-2018 IPR032090 Peptide chain release factor 3, C-terminal JDM601_0639 c71de0520e87ef875e76208a023351d8 532 SUPERFAMILY SSF52540 10 279 1.57E-77 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_0639 c71de0520e87ef875e76208a023351d8 532 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 17 153 1.4E-23 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 JDM601_0639 c71de0520e87ef875e76208a023351d8 532 Pfam PF00009 Elongation factor Tu GTP binding domain 13 279 2.7E-48 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JDM601_0639 c71de0520e87ef875e76208a023351d8 532 Gene3D G3DSA:3.30.70.3280 392 529 4.8E-42 T 12-10-2018 IPR038467 Peptide chain release factor 3, C-terminal domain superfamily JDM601_0639 c71de0520e87ef875e76208a023351d8 532 Gene3D G3DSA:3.40.50.300 115 277 2.4E-91 T 12-10-2018 JDM601_0639 c71de0520e87ef875e76208a023351d8 532 Gene3D G3DSA:3.40.50.300 83 381 2.4E-91 T 12-10-2018 JDM601_1651 141dc3c3171e4cedb74cef9f370e23ef 100 Pfam PF00550 Phosphopantetheine attachment site 12 77 4.3E-16 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain JDM601_1651 141dc3c3171e4cedb74cef9f370e23ef 100 SUPERFAMILY SSF47336 3 91 2.88E-24 T 12-10-2018 IPR036736 ACP-like superfamily JDM601_1651 141dc3c3171e4cedb74cef9f370e23ef 100 Hamap MF_01217 Acyl carrier protein [acpP]. 7 81 17.185 T 12-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 JDM601_1651 141dc3c3171e4cedb74cef9f370e23ef 100 Gene3D G3DSA:1.10.1200.10 1 100 2.2E-30 T 12-10-2018 IPR036736 ACP-like superfamily JDM601_1651 141dc3c3171e4cedb74cef9f370e23ef 100 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 38 79 2.0E-16 T 12-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 JDM601_0838 022bb13f0defce54b703879a80e1d9d1 193 Gene3D G3DSA:1.10.357.10 48 191 1.3E-16 T 12-10-2018 JDM601_0838 022bb13f0defce54b703879a80e1d9d1 193 SUPERFAMILY SSF46689 2 74 1.15E-16 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JDM601_0838 022bb13f0defce54b703879a80e1d9d1 193 Gene3D G3DSA:1.10.10.60 2 47 1.6E-15 T 12-10-2018 JDM601_0838 022bb13f0defce54b703879a80e1d9d1 193 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 6 19 3.5E-8 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_0838 022bb13f0defce54b703879a80e1d9d1 193 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 27 50 3.5E-8 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_0838 022bb13f0defce54b703879a80e1d9d1 193 Pfam PF00440 Bacterial regulatory proteins, tetR family 6 52 3.3E-13 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_0838 022bb13f0defce54b703879a80e1d9d1 193 SUPERFAMILY SSF48498 73 191 3.18E-9 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily JDM601_1276 8287d25947bcb0249ad8e81d45d13ec1 294 Gene3D G3DSA:1.10.3720.10 75 283 3.3E-16 T 12-10-2018 IPR035906 MetI-like superfamily JDM601_1276 8287d25947bcb0249ad8e81d45d13ec1 294 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 14 62 5.5E-6 T 12-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain JDM601_1276 8287d25947bcb0249ad8e81d45d13ec1 294 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 105 286 7.6E-22 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 JDM601_1276 8287d25947bcb0249ad8e81d45d13ec1 294 SUPERFAMILY SSF161098 81 269 4.84E-19 T 12-10-2018 IPR035906 MetI-like superfamily JDM601_3911 674336427ad918a0f48b16c91a8531c0 162 SUPERFAMILY SSF50324 3 159 3.27E-59 T 12-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 JDM601_3911 674336427ad918a0f48b16c91a8531c0 162 Gene3D G3DSA:3.90.80.10 1 162 1.7E-70 T 12-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 JDM601_3911 674336427ad918a0f48b16c91a8531c0 162 ProSitePatterns PS00387 Inorganic pyrophosphatase signature. 52 58 - T 12-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 JDM601_3911 674336427ad918a0f48b16c91a8531c0 162 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 1 158 34.787 T 12-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 JDM601_3911 674336427ad918a0f48b16c91a8531c0 162 Pfam PF00719 Inorganic pyrophosphatase 5 158 3.2E-54 T 12-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 JDM601_3313 548b35dac9da6f8d70ca6bdd5734a0ac 148 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 30 146 4.4E-31 T 12-10-2018 IPR021131 Ribosomal protein L18e/L15P JDM601_3313 548b35dac9da6f8d70ca6bdd5734a0ac 148 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 7 148 19.494 T 12-10-2018 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 JDM601_3313 548b35dac9da6f8d70ca6bdd5734a0ac 148 Gene3D G3DSA:3.100.10.10 69 148 8.9E-21 T 12-10-2018 JDM601_3313 548b35dac9da6f8d70ca6bdd5734a0ac 148 SUPERFAMILY SSF52080 8 146 6.8E-40 T 12-10-2018 IPR036227 Ribosomal L18e/L15P superfamily JDM601_3313 548b35dac9da6f8d70ca6bdd5734a0ac 148 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 6 145 1.3E-46 T 12-10-2018 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JDM601_1119 31a512d8c3302ff0f3b634c3521cc214 176 SUPERFAMILY SSF51161 12 173 1.52E-42 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily JDM601_1119 31a512d8c3302ff0f3b634c3521cc214 176 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 95 129 5.5E-8 T 12-10-2018 IPR001451 Hexapeptide repeat JDM601_1119 31a512d8c3302ff0f3b634c3521cc214 176 Gene3D G3DSA:2.160.10.10 9 175 2.2E-56 T 12-10-2018 JDM601_4295 e1ac0af104559de895cf4b5e58156a57 499 SMART SM00046 212 338 9.4E-7 T 12-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 JDM601_4295 e1ac0af104559de895cf4b5e58156a57 499 Pfam PF00781 Diacylglycerol kinase catalytic domain 213 327 1.0E-19 T 12-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 JDM601_4295 e1ac0af104559de895cf4b5e58156a57 499 SUPERFAMILY SSF111331 212 493 9.32E-54 T 12-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily JDM601_4295 e1ac0af104559de895cf4b5e58156a57 499 Gene3D G3DSA:2.60.200.40 328 484 1.8E-21 T 12-10-2018 JDM601_4295 e1ac0af104559de895cf4b5e58156a57 499 SMART SM00014 74 183 5.5E-15 T 12-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase JDM601_4295 e1ac0af104559de895cf4b5e58156a57 499 Pfam PF01569 PAP2 superfamily 79 186 9.4E-14 T 12-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase JDM601_4295 e1ac0af104559de895cf4b5e58156a57 499 SUPERFAMILY SSF48317 18 192 4.06E-32 T 12-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily JDM601_4295 e1ac0af104559de895cf4b5e58156a57 499 Gene3D G3DSA:3.40.50.10330 209 327 4.0E-20 T 12-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 JDM601_4295 e1ac0af104559de895cf4b5e58156a57 499 Gene3D G3DSA:1.20.144.10 106 202 6.5E-15 T 12-10-2018 JDM601_1596 5570092344651dfb5035928939b8e8be 646 SUPERFAMILY SSF110942 526 642 3.53E-32 T 12-10-2018 IPR037196 HSP90, C-terminal domain JDM601_1596 5570092344651dfb5035928939b8e8be 646 SUPERFAMILY SSF54211 246 499 3.57E-92 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold JDM601_1596 5570092344651dfb5035928939b8e8be 646 SMART SM00387 28 188 3.9E-6 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JDM601_1596 5570092344651dfb5035928939b8e8be 646 SUPERFAMILY SSF55874 5 223 3.67E-59 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JDM601_1596 5570092344651dfb5035928939b8e8be 646 Hamap MF_00505 Chaperone protein HtpG [htpG]. 3 643 29.868 T 12-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 JDM601_1596 5570092344651dfb5035928939b8e8be 646 ProSitePatterns PS00298 Heat shock hsp90 proteins family signature. 26 35 - T 12-10-2018 IPR019805 Heat shock protein Hsp90, conserved site GO:0005524|GO:0006457|GO:0051082 JDM601_1596 5570092344651dfb5035928939b8e8be 646 PRINTS PR00775 90kDa heat shock protein signature 76 93 1.6E-54 T 12-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal JDM601_1596 5570092344651dfb5035928939b8e8be 646 PRINTS PR00775 90kDa heat shock protein signature 94 111 1.6E-54 T 12-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal JDM601_1596 5570092344651dfb5035928939b8e8be 646 PRINTS PR00775 90kDa heat shock protein signature 126 148 1.6E-54 T 12-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal JDM601_1596 5570092344651dfb5035928939b8e8be 646 PRINTS PR00775 90kDa heat shock protein signature 6 26 1.6E-54 T 12-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal JDM601_1596 5570092344651dfb5035928939b8e8be 646 PRINTS PR00775 90kDa heat shock protein signature 27 49 1.6E-54 T 12-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal JDM601_1596 5570092344651dfb5035928939b8e8be 646 PRINTS PR00775 90kDa heat shock protein signature 176 193 1.6E-54 T 12-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal JDM601_1596 5570092344651dfb5035928939b8e8be 646 PRINTS PR00775 90kDa heat shock protein signature 199 217 1.6E-54 T 12-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal JDM601_1596 5570092344651dfb5035928939b8e8be 646 Pfam PF00183 Hsp90 protein 234 644 8.6E-132 T 12-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 JDM601_1596 5570092344651dfb5035928939b8e8be 646 Gene3D G3DSA:3.40.50.11260 417 507 3.8E-31 T 12-10-2018 JDM601_1596 5570092344651dfb5035928939b8e8be 646 Gene3D G3DSA:1.20.120.790 508 643 1.9E-40 T 12-10-2018 IPR037196 HSP90, C-terminal domain JDM601_1596 5570092344651dfb5035928939b8e8be 646 Gene3D G3DSA:3.30.565.10 1 238 8.1E-73 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JDM601_1596 5570092344651dfb5035928939b8e8be 646 PIRSF PIRSF002583 1 645 1.5E-219 T 12-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 JDM601_1596 5570092344651dfb5035928939b8e8be 646 Gene3D G3DSA:3.30.230.80 245 416 3.7E-64 T 12-10-2018 JDM601_1596 5570092344651dfb5035928939b8e8be 646 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 33 161 3.6E-12 T 12-10-2018 JDM601_3541 bb9d4f1cf65d20ae21be19d0d0b228d4 260 Gene3D G3DSA:1.10.10.10 119 226 1.1E-33 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JDM601_3541 bb9d4f1cf65d20ae21be19d0d0b228d4 260 Pfam PF00486 Transcriptional regulatory protein, C terminal 144 217 4.2E-27 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 JDM601_3541 bb9d4f1cf65d20ae21be19d0d0b228d4 260 SMART SM00862 144 218 1.4E-26 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 JDM601_3541 bb9d4f1cf65d20ae21be19d0d0b228d4 260 SUPERFAMILY SSF46894 121 217 8.69E-29 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 JDM601_3541 bb9d4f1cf65d20ae21be19d0d0b228d4 260 Gene3D G3DSA:3.40.50.2300 1 116 1.0E-43 T 12-10-2018 JDM601_1116 6efb3a3370f0f7cbbc54372cb00e817b 420 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 352 361 - T 12-10-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 JDM601_1116 6efb3a3370f0f7cbbc54372cb00e817b 420 PRINTS PR00359 B-class P450 signature 300 327 1.1E-37 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_1116 6efb3a3370f0f7cbbc54372cb00e817b 420 PRINTS PR00359 B-class P450 signature 163 178 1.1E-37 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_1116 6efb3a3370f0f7cbbc54372cb00e817b 420 PRINTS PR00359 B-class P450 signature 350 359 1.1E-37 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_1116 6efb3a3370f0f7cbbc54372cb00e817b 420 PRINTS PR00359 B-class P450 signature 146 162 1.1E-37 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_1116 6efb3a3370f0f7cbbc54372cb00e817b 420 PRINTS PR00359 B-class P450 signature 100 111 1.1E-37 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_1116 6efb3a3370f0f7cbbc54372cb00e817b 420 PRINTS PR00359 B-class P450 signature 328 343 1.1E-37 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_1116 6efb3a3370f0f7cbbc54372cb00e817b 420 PRINTS PR00359 B-class P450 signature 283 294 1.1E-37 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_1116 6efb3a3370f0f7cbbc54372cb00e817b 420 PRINTS PR00359 B-class P450 signature 201 223 1.1E-37 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_1116 6efb3a3370f0f7cbbc54372cb00e817b 420 PRINTS PR00359 B-class P450 signature 359 370 1.1E-37 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_1116 6efb3a3370f0f7cbbc54372cb00e817b 420 Pfam PF00067 Cytochrome P450 201 379 1.7E-20 T 12-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_1116 6efb3a3370f0f7cbbc54372cb00e817b 420 Gene3D G3DSA:1.10.630.10 2 419 4.5E-102 T 12-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_1116 6efb3a3370f0f7cbbc54372cb00e817b 420 SUPERFAMILY SSF48264 14 417 2.75E-80 T 12-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_2627 c2991ed69382927a50f4012e5b4eaf2d 228 PIRSF PIRSF000386 1 228 7.0E-86 T 12-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 JDM601_2627 c2991ed69382927a50f4012e5b4eaf2d 228 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 22 224 3.6E-70 T 12-10-2018 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 JDM601_2627 c2991ed69382927a50f4012e5b4eaf2d 228 Gene3D G3DSA:3.40.1280.10 1 165 2.9E-66 T 12-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal JDM601_2627 c2991ed69382927a50f4012e5b4eaf2d 228 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 228 95.393 T 12-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 JDM601_2627 c2991ed69382927a50f4012e5b4eaf2d 228 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 1 227 2.1E-70 T 12-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 JDM601_2627 c2991ed69382927a50f4012e5b4eaf2d 228 SUPERFAMILY SSF75217 2 227 2.16E-83 T 12-10-2018 IPR029028 Alpha/beta knot methyltransferases JDM601_2627 c2991ed69382927a50f4012e5b4eaf2d 228 Gene3D G3DSA:1.10.1270.20 166 228 1.2E-28 T 12-10-2018 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 JDM601_0231 b21d8a914a794e33f094e2ce0c984c56 271 Gene3D G3DSA:3.30.540.10 1 143 7.1E-40 T 12-10-2018 JDM601_0231 b21d8a914a794e33f094e2ce0c984c56 271 SUPERFAMILY SSF56655 27 261 1.44E-62 T 12-10-2018 JDM601_0231 b21d8a914a794e33f094e2ce0c984c56 271 PRINTS PR00377 Inositol monophosphatase superfamily signature 36 56 2.4E-30 T 12-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 JDM601_0231 b21d8a914a794e33f094e2ce0c984c56 271 PRINTS PR00377 Inositol monophosphatase superfamily signature 58 74 2.4E-30 T 12-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 JDM601_0231 b21d8a914a794e33f094e2ce0c984c56 271 PRINTS PR00377 Inositol monophosphatase superfamily signature 182 203 2.4E-30 T 12-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 JDM601_0231 b21d8a914a794e33f094e2ce0c984c56 271 PRINTS PR00377 Inositol monophosphatase superfamily signature 83 99 2.4E-30 T 12-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 JDM601_0231 b21d8a914a794e33f094e2ce0c984c56 271 PRINTS PR00377 Inositol monophosphatase superfamily signature 213 237 2.4E-30 T 12-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 JDM601_0231 b21d8a914a794e33f094e2ce0c984c56 271 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 83 96 - T 12-10-2018 IPR020583 Inositol monophosphatase, metal-binding site JDM601_0231 b21d8a914a794e33f094e2ce0c984c56 271 Gene3D G3DSA:3.40.190.80 147 266 1.8E-37 T 12-10-2018 JDM601_0231 b21d8a914a794e33f094e2ce0c984c56 271 Pfam PF00459 Inositol monophosphatase family 17 261 7.0E-57 T 12-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 JDM601_0231 b21d8a914a794e33f094e2ce0c984c56 271 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 216 230 - T 12-10-2018 IPR020550 Inositol monophosphatase, conserved site GO:0046854 JDM601_2565 ec3682a69bd8e265d8467bb6cf425c13 347 Gene3D G3DSA:3.30.300.20 183 261 1.3E-31 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta JDM601_2565 ec3682a69bd8e265d8467bb6cf425c13 347 SUPERFAMILY SSF54814 184 262 1.73E-27 T 12-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 JDM601_2565 ec3682a69bd8e265d8467bb6cf425c13 347 Gene3D G3DSA:3.30.1480.10 1 99 7.6E-37 T 12-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 JDM601_2565 ec3682a69bd8e265d8467bb6cf425c13 347 SUPERFAMILY SSF54814 263 326 2.09E-16 T 12-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 JDM601_2565 ec3682a69bd8e265d8467bb6cf425c13 347 Gene3D G3DSA:2.40.50.140 105 182 2.4E-29 T 12-10-2018 JDM601_2565 ec3682a69bd8e265d8467bb6cf425c13 347 SUPERFAMILY SSF50249 110 183 6.11E-16 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold JDM601_2565 ec3682a69bd8e265d8467bb6cf425c13 347 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 5 326 5.5E-105 T 12-10-2018 IPR010213 Transcription termination factor NusA GO:0003723 JDM601_2565 ec3682a69bd8e265d8467bb6cf425c13 347 Pfam PF13184 NusA-like KH domain 214 281 9.9E-25 T 12-10-2018 IPR025249 KH domain, NusA-like GO:0003723 JDM601_2565 ec3682a69bd8e265d8467bb6cf425c13 347 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 1 339 25.927 T 12-10-2018 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 JDM601_2565 ec3682a69bd8e265d8467bb6cf425c13 347 SMART SM00316 110 184 8.4E-8 T 12-10-2018 IPR022967 RNA-binding domain, S1 JDM601_2565 ec3682a69bd8e265d8467bb6cf425c13 347 Pfam PF08529 NusA N-terminal domain 6 61 6.2E-8 T 12-10-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 JDM601_2565 ec3682a69bd8e265d8467bb6cf425c13 347 Pfam PF08529 NusA N-terminal domain 63 100 3.6E-7 T 12-10-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 JDM601_2565 ec3682a69bd8e265d8467bb6cf425c13 347 Gene3D G3DSA:3.30.300.20 262 332 4.1E-30 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta JDM601_2565 ec3682a69bd8e265d8467bb6cf425c13 347 SUPERFAMILY SSF69705 1 99 1.7E-29 T 12-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 JDM601_1667 a5ffe276c2c052794ae0f2c4812a058e 190 Gene3D G3DSA:1.10.260.40 2 75 1.2E-18 T 12-10-2018 JDM601_1667 a5ffe276c2c052794ae0f2c4812a058e 190 Pfam PF01381 Helix-turn-helix 17 71 7.3E-15 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 JDM601_1667 a5ffe276c2c052794ae0f2c4812a058e 190 SMART SM00530 16 71 1.7E-16 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 JDM601_1667 a5ffe276c2c052794ae0f2c4812a058e 190 SUPERFAMILY SSF51182 70 179 1.94E-23 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily JDM601_1667 a5ffe276c2c052794ae0f2c4812a058e 190 Pfam PF07883 Cupin domain 122 179 6.9E-12 T 12-10-2018 IPR013096 Cupin 2, conserved barrel JDM601_1667 a5ffe276c2c052794ae0f2c4812a058e 190 SUPERFAMILY SSF47413 12 77 1.41E-16 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 JDM601_1667 a5ffe276c2c052794ae0f2c4812a058e 190 Gene3D G3DSA:2.60.120.10 76 179 3.8E-16 T 12-10-2018 IPR014710 RmlC-like jelly roll fold JDM601_1185 1d09a6a3a81a058f77a66b0d345b1e33 190 SUPERFAMILY SSF48150 10 185 2.2E-68 T 12-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 JDM601_1185 1d09a6a3a81a058f77a66b0d345b1e33 190 Pfam PF03352 Methyladenine glycosylase 14 184 2.2E-68 T 12-10-2018 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 JDM601_1185 1d09a6a3a81a058f77a66b0d345b1e33 190 TIGRFAM TIGR00624 tag: DNA-3-methyladenine glycosylase I 10 186 1.7E-89 T 12-10-2018 IPR004597 DNA-3-methyladenine glycosylase I GO:0006284|GO:0008725 JDM601_1185 1d09a6a3a81a058f77a66b0d345b1e33 190 Gene3D G3DSA:1.10.340.30 9 189 4.2E-74 T 12-10-2018 JDM601_0354 f079a224c91a8cfc7a19a806f3cee7fc 407 SUPERFAMILY SSF103473 16 395 6.28E-46 T 12-10-2018 IPR036259 MFS transporter superfamily JDM601_0354 f079a224c91a8cfc7a19a806f3cee7fc 407 Gene3D G3DSA:1.20.1250.20 15 396 1.7E-42 T 12-10-2018 JDM601_0354 f079a224c91a8cfc7a19a806f3cee7fc 407 Pfam PF05977 Transmembrane secretion effector 15 394 1.8E-45 T 12-10-2018 IPR010290 Transmembrane secretion effector JDM601_1296 be063c0b0ba0ec686ff7422926f8af02 682 Pfam PF07498 Rho termination factor, N-terminal domain 81 115 8.8E-10 T 12-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 JDM601_1296 be063c0b0ba0ec686ff7422926f8af02 682 Hamap MF_01884 Transcription termination factor Rho [rho]. 300 675 199.82 T 12-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 JDM601_1296 be063c0b0ba0ec686ff7422926f8af02 682 SMART SM00959 80 121 2.9E-10 T 12-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 JDM601_1296 be063c0b0ba0ec686ff7422926f8af02 682 Pfam PF07497 Rho termination factor, RNA-binding domain 307 384 6.5E-28 T 12-10-2018 IPR011113 Rho termination factor, RNA-binding domain GO:0003723|GO:0006353 JDM601_1296 be063c0b0ba0ec686ff7422926f8af02 682 SUPERFAMILY SSF52540 377 626 9.49E-66 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_1296 be063c0b0ba0ec686ff7422926f8af02 682 TIGRFAM TIGR00767 rho: transcription termination factor Rho 80 674 1.4E-209 T 12-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 JDM601_1296 be063c0b0ba0ec686ff7422926f8af02 682 SMART SM00382 426 611 2.2E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain JDM601_1296 be063c0b0ba0ec686ff7422926f8af02 682 SMART SM00357 308 369 6.4E-9 T 12-10-2018 IPR011129 Cold shock domain GO:0003676 JDM601_1296 be063c0b0ba0ec686ff7422926f8af02 682 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 415 619 1.0E-25 T 12-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 JDM601_1296 be063c0b0ba0ec686ff7422926f8af02 682 Gene3D G3DSA:3.40.50.300 390 673 2.6E-123 T 12-10-2018 JDM601_1296 be063c0b0ba0ec686ff7422926f8af02 682 SUPERFAMILY SSF50249 308 383 2.74E-14 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold JDM601_1296 be063c0b0ba0ec686ff7422926f8af02 682 Gene3D G3DSA:2.40.50.140 239 388 3.6E-28 T 12-10-2018 JDM601_1296 be063c0b0ba0ec686ff7422926f8af02 682 SUPERFAMILY SSF68912 81 116 4.71E-5 T 12-10-2018 IPR036269 Rho termination factor, N-terminal domain superfamily JDM601_4183 b349aeb384c6eb936099127c1f8f58bc 226 Pfam PF06912 Protein of unknown function (DUF1275) 13 212 6.5E-27 T 12-10-2018 IPR010699 Protein of unknown function DUF1275 JDM601_3885 915dd6304a0d0293728fc87fc88e951c 821 Gene3D G3DSA:1.10.8.60 701 797 2.2E-27 T 12-10-2018 JDM601_3885 915dd6304a0d0293728fc87fc88e951c 821 Gene3D G3DSA:1.10.1780.10 1 127 1.3E-49 T 12-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 JDM601_3885 915dd6304a0d0293728fc87fc88e951c 821 SUPERFAMILY SSF52540 473 786 5.87E-76 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_3885 915dd6304a0d0293728fc87fc88e951c 821 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 635 649 1.3E-37 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 JDM601_3885 915dd6304a0d0293728fc87fc88e951c 821 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 528 546 1.3E-37 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 JDM601_3885 915dd6304a0d0293728fc87fc88e951c 821 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 602 620 1.3E-37 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 JDM601_3885 915dd6304a0d0293728fc87fc88e951c 821 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 573 591 1.3E-37 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 JDM601_3885 915dd6304a0d0293728fc87fc88e951c 821 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 192 304 5.6E-12 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 JDM601_3885 915dd6304a0d0293728fc87fc88e951c 821 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 282 294 - T 12-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 JDM601_3885 915dd6304a0d0293728fc87fc88e951c 821 SMART SM00382 187 332 1.0E-8 T 12-10-2018 IPR003593 AAA+ ATPase domain JDM601_3885 915dd6304a0d0293728fc87fc88e951c 821 SMART SM00382 524 702 8.5E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain JDM601_3885 915dd6304a0d0293728fc87fc88e951c 821 Pfam PF07724 AAA domain (Cdc48 subfamily) 523 695 2.2E-49 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 JDM601_3885 915dd6304a0d0293728fc87fc88e951c 821 Gene3D G3DSA:3.40.50.300 147 335 1.9E-69 T 12-10-2018 JDM601_3885 915dd6304a0d0293728fc87fc88e951c 821 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 701 781 1.9E-24 T 12-10-2018 IPR019489 Clp ATPase, C-terminal JDM601_3885 915dd6304a0d0293728fc87fc88e951c 821 Pfam PF02151 UvrB/uvrC motif 404 438 3.5E-7 T 12-10-2018 IPR001943 UVR domain GO:0005515 JDM601_3885 915dd6304a0d0293728fc87fc88e951c 821 Gene3D G3DSA:3.40.50.300 455 699 3.2E-93 T 12-10-2018 JDM601_3885 915dd6304a0d0293728fc87fc88e951c 821 SUPERFAMILY SSF81923 2 123 1.96E-24 T 12-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 JDM601_3885 915dd6304a0d0293728fc87fc88e951c 821 SUPERFAMILY SSF52540 150 448 1.83E-73 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_3885 915dd6304a0d0293728fc87fc88e951c 821 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 2 47 5.4E-14 T 12-10-2018 IPR004176 Clp, N-terminal JDM601_3885 915dd6304a0d0293728fc87fc88e951c 821 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 72 121 1.2E-16 T 12-10-2018 IPR004176 Clp, N-terminal JDM601_3885 915dd6304a0d0293728fc87fc88e951c 821 Gene3D G3DSA:3.40.50.300 336 454 6.0E-39 T 12-10-2018 JDM601_3885 915dd6304a0d0293728fc87fc88e951c 821 SMART SM01086 701 792 3.8E-34 T 12-10-2018 IPR019489 Clp ATPase, C-terminal JDM601_2074 559067ee0a2e1f550ea597126b65d428 363 Pfam PF02958 Ecdysteroid kinase 63 297 8.8E-18 T 12-10-2018 IPR004119 Protein of unknown function DUF227 JDM601_2074 559067ee0a2e1f550ea597126b65d428 363 SMART SM00587 126 302 1.1E-4 T 12-10-2018 IPR015897 CHK kinase-like JDM601_2074 559067ee0a2e1f550ea597126b65d428 363 SUPERFAMILY SSF56112 16 326 1.25E-30 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily JDM601_2074 559067ee0a2e1f550ea597126b65d428 363 Gene3D G3DSA:3.90.1200.10 132 346 2.9E-14 T 12-10-2018 JDM601_4196 54a0016534b5226c83f6dc8cd3f44156 410 Pfam PF00823 PPE family 1 147 4.5E-53 T 12-10-2018 IPR000030 PPE family JDM601_4196 54a0016534b5226c83f6dc8cd3f44156 410 Pfam PF12484 Polymorphic PE/PPE proteins C terminal 301 374 1.2E-11 T 12-10-2018 IPR022171 PPE family, C-terminal JDM601_4196 54a0016534b5226c83f6dc8cd3f44156 410 SUPERFAMILY SSF140459 1 158 1.33E-52 T 12-10-2018 JDM601_4196 54a0016534b5226c83f6dc8cd3f44156 410 Gene3D G3DSA:1.20.1260.20 1 160 2.2E-56 T 12-10-2018 IPR038332 PPE superfamily JDM601_1115 5f4083d8bd1b6ab9b093fe9f8c002bc9 303 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 93 104 3.0E-10 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_1115 5f4083d8bd1b6ab9b093fe9f8c002bc9 303 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 166 185 3.0E-10 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_1115 5f4083d8bd1b6ab9b093fe9f8c002bc9 303 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 146 154 3.0E-10 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_1115 5f4083d8bd1b6ab9b093fe9f8c002bc9 303 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 153 181 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 JDM601_1115 5f4083d8bd1b6ab9b093fe9f8c002bc9 303 SUPERFAMILY SSF51735 4 259 2.12E-62 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_1115 5f4083d8bd1b6ab9b093fe9f8c002bc9 303 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 185 1.3E-26 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_1115 5f4083d8bd1b6ab9b093fe9f8c002bc9 303 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 187 204 1.3E-26 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_1115 5f4083d8bd1b6ab9b093fe9f8c002bc9 303 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 223 243 1.3E-26 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_1115 5f4083d8bd1b6ab9b093fe9f8c002bc9 303 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 1.3E-26 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_1115 5f4083d8bd1b6ab9b093fe9f8c002bc9 303 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 93 104 1.3E-26 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_1115 5f4083d8bd1b6ab9b093fe9f8c002bc9 303 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 140 156 1.3E-26 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_1115 5f4083d8bd1b6ab9b093fe9f8c002bc9 303 Gene3D G3DSA:3.40.50.720 9 302 1.9E-69 T 12-10-2018 JDM601_1115 5f4083d8bd1b6ab9b093fe9f8c002bc9 303 Pfam PF00106 short chain dehydrogenase 10 203 2.9E-44 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3425 ebcf3941f3d77a0642b30fc84874bc9c 396 Gene3D G3DSA:3.20.20.140 7 394 2.3E-91 T 12-10-2018 JDM601_3425 ebcf3941f3d77a0642b30fc84874bc9c 396 Pfam PF04909 Amidohydrolase 104 389 5.3E-23 T 12-10-2018 IPR006680 Amidohydrolase-related GO:0016787 JDM601_3425 ebcf3941f3d77a0642b30fc84874bc9c 396 SUPERFAMILY SSF51556 12 393 1.59E-62 T 12-10-2018 IPR032466 Metal-dependent hydrolase JDM601_2610 98d1179689946f8564e439f481e816b6 275 ProSitePatterns PS01127 Elongation factor Ts signature 2. 71 81 - T 12-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 JDM601_2610 98d1179689946f8564e439f481e816b6 275 Gene3D G3DSA:1.10.286.20 193 239 1.2E-34 T 12-10-2018 JDM601_2610 98d1179689946f8564e439f481e816b6 275 Gene3D G3DSA:3.30.479.20 159 273 1.2E-34 T 12-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 JDM601_2610 98d1179689946f8564e439f481e816b6 275 ProSitePatterns PS01126 Elongation factor Ts signature 1. 12 27 - T 12-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 JDM601_2610 98d1179689946f8564e439f481e816b6 275 SUPERFAMILY SSF54713 57 273 4.65E-39 T 12-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 JDM601_2610 98d1179689946f8564e439f481e816b6 275 Gene3D G3DSA:3.30.479.20 57 147 2.4E-21 T 12-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 JDM601_2610 98d1179689946f8564e439f481e816b6 275 Pfam PF00889 Elongation factor TS 67 274 9.1E-64 T 12-10-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0006414 Reactome: R-HSA-5389840 JDM601_2610 98d1179689946f8564e439f481e816b6 275 Hamap MF_00050 Elongation factor Ts [tsf]. 1 275 65.308 T 12-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 JDM601_2610 98d1179689946f8564e439f481e816b6 275 Gene3D G3DSA:1.10.8.10 1 56 3.4E-22 T 12-10-2018 JDM601_2610 98d1179689946f8564e439f481e816b6 275 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 4 274 1.4E-75 T 12-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 JDM601_2610 98d1179689946f8564e439f481e816b6 275 SUPERFAMILY SSF46934 5 55 2.04E-14 T 12-10-2018 IPR009060 UBA-like superfamily GO:0005515 JDM601_2105 2e6cb360072d69e369ae8ba0213aac21 233 SUPERFAMILY SSF53474 2 229 1.53E-35 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_2105 2e6cb360072d69e369ae8ba0213aac21 233 Pfam PF01738 Dienelactone hydrolase family 13 228 5.9E-55 T 12-10-2018 IPR002925 Dienelactone hydrolase GO:0016787 JDM601_2105 2e6cb360072d69e369ae8ba0213aac21 233 Gene3D G3DSA:3.40.50.1820 1 230 7.4E-44 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_4058 810166c143e39a11f56314c6f45c61c8 292 Pfam PF13622 Thioesterase-like superfamily 40 283 5.7E-42 T 12-10-2018 JDM601_4058 810166c143e39a11f56314c6f45c61c8 292 SUPERFAMILY SSF54637 12 116 1.41E-31 T 12-10-2018 IPR029069 HotDog domain superfamily JDM601_4058 810166c143e39a11f56314c6f45c61c8 292 Gene3D G3DSA:3.10.129.90 9 286 9.1E-79 T 12-10-2018 JDM601_4058 810166c143e39a11f56314c6f45c61c8 292 SUPERFAMILY SSF54637 123 284 6.49E-34 T 12-10-2018 IPR029069 HotDog domain superfamily JDM601_3804 598f00bb354b51595e5de4e8b11c6709 426 Pfam PF00067 Cytochrome P450 79 390 1.2E-23 T 12-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_3804 598f00bb354b51595e5de4e8b11c6709 426 Gene3D G3DSA:1.10.630.10 8 425 1.9E-103 T 12-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_3804 598f00bb354b51595e5de4e8b11c6709 426 SUPERFAMILY SSF48264 66 421 3.14E-84 T 12-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_3804 598f00bb354b51595e5de4e8b11c6709 426 PRINTS PR00359 B-class P450 signature 361 370 1.9E-43 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3804 598f00bb354b51595e5de4e8b11c6709 426 PRINTS PR00359 B-class P450 signature 160 176 1.9E-43 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3804 598f00bb354b51595e5de4e8b11c6709 426 PRINTS PR00359 B-class P450 signature 113 124 1.9E-43 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3804 598f00bb354b51595e5de4e8b11c6709 426 PRINTS PR00359 B-class P450 signature 177 192 1.9E-43 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3804 598f00bb354b51595e5de4e8b11c6709 426 PRINTS PR00359 B-class P450 signature 370 381 1.9E-43 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3804 598f00bb354b51595e5de4e8b11c6709 426 PRINTS PR00359 B-class P450 signature 295 306 1.9E-43 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3804 598f00bb354b51595e5de4e8b11c6709 426 PRINTS PR00359 B-class P450 signature 312 339 1.9E-43 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3804 598f00bb354b51595e5de4e8b11c6709 426 PRINTS PR00359 B-class P450 signature 340 355 1.9E-43 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3804 598f00bb354b51595e5de4e8b11c6709 426 PRINTS PR00359 B-class P450 signature 214 236 1.9E-43 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_1906 b4aa7635238d31c28c4a353094a69728 437 Pfam PF12484 Polymorphic PE/PPE proteins C terminal 306 385 9.0E-10 T 12-10-2018 IPR022171 PPE family, C-terminal JDM601_1906 b4aa7635238d31c28c4a353094a69728 437 SUPERFAMILY SSF140459 3 173 4.71E-57 T 12-10-2018 JDM601_1906 b4aa7635238d31c28c4a353094a69728 437 Pfam PF00823 PPE family 6 162 2.9E-55 T 12-10-2018 IPR000030 PPE family JDM601_1906 b4aa7635238d31c28c4a353094a69728 437 Gene3D G3DSA:1.20.1260.20 2 175 3.2E-61 T 12-10-2018 IPR038332 PPE superfamily JDM601_3220 4407247ae307bb48afebb268c9718ce5 786 Gene3D G3DSA:1.50.10.10 321 679 6.1E-118 T 12-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 JDM601_3220 4407247ae307bb48afebb268c9718ce5 786 Pfam PF03632 Glycosyl hydrolase family 65 central catalytic domain 327 693 2.9E-137 T 12-10-2018 IPR005195 Glycoside hydrolase, family 65, central catalytic GO:0003824|GO:0005975 JDM601_3220 4407247ae307bb48afebb268c9718ce5 786 SUPERFAMILY SSF48208 279 747 4.08E-114 T 12-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 JDM601_3220 4407247ae307bb48afebb268c9718ce5 786 Pfam PF03633 Glycosyl hydrolase family 65, C-terminal domain 698 750 1.0E-13 T 12-10-2018 IPR005194 Glycoside hydrolase family 65, C-terminal JDM601_3220 4407247ae307bb48afebb268c9718ce5 786 Gene3D G3DSA:2.60.420.10 680 759 2.1E-20 T 12-10-2018 JDM601_3220 4407247ae307bb48afebb268c9718ce5 786 Gene3D G3DSA:2.70.98.40 4 273 1.1E-59 T 12-10-2018 IPR037018 Glycoside hydrolase family 65, N-terminal domain superfamily JDM601_3220 4407247ae307bb48afebb268c9718ce5 786 PIRSF PIRSF036289 1 761 2.5E-214 T 12-10-2018 IPR017045 Maltose phosphorylase/glycosyl hydrolase/vacuolar acid trehalase JDM601_3220 4407247ae307bb48afebb268c9718ce5 786 Pfam PF03636 Glycosyl hydrolase family 65, N-terminal domain 17 270 2.9E-62 T 12-10-2018 IPR005196 Glycoside hydrolase, family 65, N-terminal GO:0003824|GO:0005975 JDM601_3220 4407247ae307bb48afebb268c9718ce5 786 SUPERFAMILY SSF74650 6 272 4.71E-66 T 12-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 JDM601_4042 1a73a42dba4d25350623960d631764ae 235 SMART SM00448 10 121 8.2E-43 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JDM601_4042 1a73a42dba4d25350623960d631764ae 235 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 231 3.6E-25 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 JDM601_4042 1a73a42dba4d25350623960d631764ae 235 Pfam PF00072 Response regulator receiver domain 12 121 1.5E-28 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JDM601_4042 1a73a42dba4d25350623960d631764ae 235 Gene3D G3DSA:1.10.10.10 136 235 8.2E-33 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JDM601_4042 1a73a42dba4d25350623960d631764ae 235 Gene3D G3DSA:3.40.50.2300 2 135 2.6E-37 T 12-10-2018 JDM601_4042 1a73a42dba4d25350623960d631764ae 235 SMART SM00862 157 231 4.9E-26 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 JDM601_4042 1a73a42dba4d25350623960d631764ae 235 SUPERFAMILY SSF52172 8 187 8.11E-42 T 12-10-2018 IPR011006 CheY-like superfamily JDM601_2635 b51c2574716dccccc3cb5fb9d76afeb7 525 SMART SM00382 99 312 1.3E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain JDM601_2635 b51c2574716dccccc3cb5fb9d76afeb7 525 Pfam PF00448 SRP54-type protein, GTPase domain 100 307 9.0E-68 T 12-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 JDM601_2635 b51c2574716dccccc3cb5fb9d76afeb7 525 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 280 293 - T 12-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 JDM601_2635 b51c2574716dccccc3cb5fb9d76afeb7 525 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 449 33.497 T 12-10-2018 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 Reactome: R-HSA-1799339 JDM601_2635 b51c2574716dccccc3cb5fb9d76afeb7 525 SUPERFAMILY SSF47446 339 439 4.09E-32 T 12-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 JDM601_2635 b51c2574716dccccc3cb5fb9d76afeb7 525 SUPERFAMILY SSF52540 42 365 5.24E-57 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_2635 b51c2574716dccccc3cb5fb9d76afeb7 525 TIGRFAM TIGR00959 ffh: signal recognition particle protein 2 437 3.3E-176 T 12-10-2018 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 JDM601_2635 b51c2574716dccccc3cb5fb9d76afeb7 525 Gene3D G3DSA:1.10.260.30 322 450 3.4E-38 T 12-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 JDM601_2635 b51c2574716dccccc3cb5fb9d76afeb7 525 Pfam PF02978 Signal peptide binding domain 339 436 5.0E-29 T 12-10-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 JDM601_2635 b51c2574716dccccc3cb5fb9d76afeb7 525 Gene3D G3DSA:1.20.120.140 5 317 1.3E-118 T 12-10-2018 JDM601_2635 b51c2574716dccccc3cb5fb9d76afeb7 525 SMART SM00963 1 86 3.3E-33 T 12-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 JDM601_2635 b51c2574716dccccc3cb5fb9d76afeb7 525 Gene3D G3DSA:3.40.50.300 90 296 1.3E-118 T 12-10-2018 JDM601_2635 b51c2574716dccccc3cb5fb9d76afeb7 525 SMART SM00962 100 307 1.7E-105 T 12-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 JDM601_2635 b51c2574716dccccc3cb5fb9d76afeb7 525 Pfam PF02881 SRP54-type protein, helical bundle domain 5 82 1.9E-20 T 12-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 JDM601_3077 9421afa633393f3d6baee11ed72a9dda 237 Gene3D G3DSA:3.30.565.10 110 234 1.9E-16 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JDM601_3077 9421afa633393f3d6baee11ed72a9dda 237 Gene3D G3DSA:3.30.750.24 1 109 9.9E-11 T 12-10-2018 IPR036513 STAS domain superfamily JDM601_3077 9421afa633393f3d6baee11ed72a9dda 237 SUPERFAMILY SSF52091 3 101 5.49E-9 T 12-10-2018 IPR036513 STAS domain superfamily JDM601_2248 6294aa7ecedd5870f06ef34ddfdcba34 273 Gene3D G3DSA:3.60.15.10 76 266 1.6E-9 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like JDM601_2248 6294aa7ecedd5870f06ef34ddfdcba34 273 Pfam PF00753 Metallo-beta-lactamase superfamily 81 239 6.6E-7 T 12-10-2018 IPR001279 Metallo-beta-lactamase JDM601_2248 6294aa7ecedd5870f06ef34ddfdcba34 273 SUPERFAMILY SSF56281 54 239 5.04E-25 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like JDM601_2248 6294aa7ecedd5870f06ef34ddfdcba34 273 SMART SM00849 73 242 0.0011 T 12-10-2018 IPR001279 Metallo-beta-lactamase JDM601_4033 5d86f28abe2377352637fc6e458a2ef5 155 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 11 153 45.48 T 12-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 JDM601_4033 5d86f28abe2377352637fc6e458a2ef5 155 SUPERFAMILY SSF53927 6 153 1.84E-45 T 12-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 JDM601_4033 5d86f28abe2377352637fc6e458a2ef5 155 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 7 105 2.8E-24 T 12-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain JDM601_4033 5d86f28abe2377352637fc6e458a2ef5 155 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 56 94 - T 12-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 JDM601_4033 5d86f28abe2377352637fc6e458a2ef5 155 Gene3D G3DSA:3.40.140.10 4 154 1.6E-47 T 12-10-2018 JDM601_4240 e5dc425087880d3fb7c69ed431069ec0 480 Pfam PF00171 Aldehyde dehydrogenase family 17 476 2.5E-176 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 JDM601_4240 e5dc425087880d3fb7c69ed431069ec0 480 SUPERFAMILY SSF53720 4 478 1.14E-158 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 JDM601_4240 e5dc425087880d3fb7c69ed431069ec0 480 Gene3D G3DSA:3.40.605.10 16 476 3.4E-177 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 JDM601_4240 e5dc425087880d3fb7c69ed431069ec0 480 Gene3D G3DSA:3.40.309.10 259 448 3.4E-177 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 JDM601_4240 e5dc425087880d3fb7c69ed431069ec0 480 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 252 259 - T 12-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 JDM601_1508 6ec35a5307567c85793d812ffcf9133d 582 SUPERFAMILY SSF50447 158 257 1.55E-17 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily JDM601_1508 6ec35a5307567c85793d812ffcf9133d 582 Gene3D G3DSA:3.30.70.2570 455 529 3.8E-33 T 12-10-2018 IPR038363 LepA, C-terminal domain superfamily JDM601_1508 6ec35a5307567c85793d812ffcf9133d 582 Gene3D G3DSA:3.40.50.300 1 161 4.3E-54 T 12-10-2018 JDM601_1508 6ec35a5307567c85793d812ffcf9133d 582 Pfam PF06421 GTP-binding protein LepA C-terminus 464 568 3.4E-48 T 12-10-2018 IPR013842 GTP-binding protein LepA, C-terminal JDM601_1508 6ec35a5307567c85793d812ffcf9133d 582 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 19 34 - T 12-10-2018 IPR031157 Tr-type G domain, conserved site JDM601_1508 6ec35a5307567c85793d812ffcf9133d 582 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 23 152 2.6E-12 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 JDM601_1508 6ec35a5307567c85793d812ffcf9133d 582 Pfam PF00679 Elongation factor G C-terminus 374 460 5.3E-21 T 12-10-2018 IPR000640 Elongation factor EFG, domain V-like JDM601_1508 6ec35a5307567c85793d812ffcf9133d 582 TIGRFAM TIGR01393 lepA: elongation factor 4 1 571 3.9E-279 T 12-10-2018 IPR006297 Elongation factor 4 GO:0005525 JDM601_1508 6ec35a5307567c85793d812ffcf9133d 582 SMART SM00838 373 457 0.0017 T 12-10-2018 IPR000640 Elongation factor EFG, domain V-like JDM601_1508 6ec35a5307567c85793d812ffcf9133d 582 Gene3D G3DSA:3.30.70.3380 344 454 1.4E-39 T 12-10-2018 JDM601_1508 6ec35a5307567c85793d812ffcf9133d 582 Hamap MF_00071 Elongation factor 4 [lepA]. 1 573 272.194 T 12-10-2018 IPR006297 Elongation factor 4 GO:0005525 JDM601_1508 6ec35a5307567c85793d812ffcf9133d 582 SUPERFAMILY SSF52540 8 181 3.12E-41 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_1508 6ec35a5307567c85793d812ffcf9133d 582 Gene3D G3DSA:3.30.70.870 262 343 4.2E-35 T 12-10-2018 JDM601_1508 6ec35a5307567c85793d812ffcf9133d 582 SUPERFAMILY SSF54980 267 346 5.4E-19 T 12-10-2018 IPR035647 EF-G domain III/V-like JDM601_1508 6ec35a5307567c85793d812ffcf9133d 582 Pfam PF00009 Elongation factor Tu GTP binding domain 2 157 5.7E-36 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JDM601_1508 6ec35a5307567c85793d812ffcf9133d 582 Gene3D G3DSA:2.40.30.10 162 261 5.0E-32 T 12-10-2018 JDM601_1508 6ec35a5307567c85793d812ffcf9133d 582 PRINTS PR00315 GTP-binding elongation factor signature 26 34 8.7E-7 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JDM601_1508 6ec35a5307567c85793d812ffcf9133d 582 PRINTS PR00315 GTP-binding elongation factor signature 50 60 8.7E-7 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JDM601_1508 6ec35a5307567c85793d812ffcf9133d 582 PRINTS PR00315 GTP-binding elongation factor signature 66 77 8.7E-7 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JDM601_1508 6ec35a5307567c85793d812ffcf9133d 582 PRINTS PR00315 GTP-binding elongation factor signature 102 111 8.7E-7 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JDM601_1508 6ec35a5307567c85793d812ffcf9133d 582 SUPERFAMILY SSF54980 374 469 9.59E-23 T 12-10-2018 IPR035647 EF-G domain III/V-like JDM601_3840 1e503ee72cb60a2ddf0d1cbbe385057e 763 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 36 118 2.4E-10 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 JDM601_3840 1e503ee72cb60a2ddf0d1cbbe385057e 763 Gene3D G3DSA:1.10.540.10 405 513 1.5E-8 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 JDM601_3840 1e503ee72cb60a2ddf0d1cbbe385057e 763 Gene3D G3DSA:1.10.540.10 4 117 2.4E-16 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 JDM601_3840 1e503ee72cb60a2ddf0d1cbbe385057e 763 Gene3D G3DSA:1.20.140.10 621 759 2.2E-30 T 12-10-2018 JDM601_3840 1e503ee72cb60a2ddf0d1cbbe385057e 763 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 229 381 2.5E-13 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 JDM601_3840 1e503ee72cb60a2ddf0d1cbbe385057e 763 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 625 742 3.0E-17 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 JDM601_3840 1e503ee72cb60a2ddf0d1cbbe385057e 763 SUPERFAMILY SSF56645 406 602 1.06E-13 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 JDM601_3840 1e503ee72cb60a2ddf0d1cbbe385057e 763 Gene3D G3DSA:1.20.140.10 233 387 5.9E-28 T 12-10-2018 JDM601_3840 1e503ee72cb60a2ddf0d1cbbe385057e 763 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 123 217 3.4E-20 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 JDM601_3840 1e503ee72cb60a2ddf0d1cbbe385057e 763 SUPERFAMILY SSF47203 624 752 4.83E-28 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 JDM601_3840 1e503ee72cb60a2ddf0d1cbbe385057e 763 Gene3D G3DSA:2.40.110.10 535 616 7.8E-7 T 12-10-2018 JDM601_3840 1e503ee72cb60a2ddf0d1cbbe385057e 763 Gene3D G3DSA:2.40.110.10 123 232 3.0E-35 T 12-10-2018 JDM601_3840 1e503ee72cb60a2ddf0d1cbbe385057e 763 SUPERFAMILY SSF56645 39 242 8.64E-63 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 JDM601_3840 1e503ee72cb60a2ddf0d1cbbe385057e 763 SUPERFAMILY SSF47203 229 383 2.86E-14 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 JDM601_2788 0c99f1f0125ef872d1f2ef2248db6dd4 155 Gene3D G3DSA:3.40.50.360 8 145 2.0E-45 T 12-10-2018 IPR029039 Flavoprotein-like superfamily JDM601_2788 0c99f1f0125ef872d1f2ef2248db6dd4 155 TIGRFAM TIGR00333 nrdI: nrdI protein 10 142 2.7E-47 T 12-10-2018 IPR004465 Ribonucleotide reductase Class Ib, NrdI JDM601_2788 0c99f1f0125ef872d1f2ef2248db6dd4 155 Hamap MF_00128 Protein NrdI [nrdI]. 8 144 34.92 T 12-10-2018 IPR020852 Ribonucleotide reductase, class Ib, NrdI, bacterial JDM601_2788 0c99f1f0125ef872d1f2ef2248db6dd4 155 PIRSF PIRSF005087 6 147 1.7E-53 T 12-10-2018 IPR004465 Ribonucleotide reductase Class Ib, NrdI JDM601_2788 0c99f1f0125ef872d1f2ef2248db6dd4 155 Pfam PF07972 NrdI Flavodoxin like 10 134 5.8E-46 T 12-10-2018 IPR004465 Ribonucleotide reductase Class Ib, NrdI JDM601_2788 0c99f1f0125ef872d1f2ef2248db6dd4 155 SUPERFAMILY SSF52218 9 143 5.03E-24 T 12-10-2018 IPR029039 Flavoprotein-like superfamily JDM601_1293 f342f729012d1b7f686f77daa230682c 434 SUPERFAMILY SSF55347 132 302 1.44E-51 T 12-10-2018 JDM601_1293 f342f729012d1b7f686f77daa230682c 434 Pfam PF01842 ACT domain 348 417 4.9E-11 T 12-10-2018 IPR002912 ACT domain JDM601_1293 f342f729012d1b7f686f77daa230682c 434 Gene3D G3DSA:3.40.50.720 1 334 1.2E-140 T 12-10-2018 JDM601_1293 f342f729012d1b7f686f77daa230682c 434 PIRSF PIRSF000098 1 432 3.5E-154 T 12-10-2018 IPR016204 Homoserine dehydrogenase GO:0004412|GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 JDM601_1293 f342f729012d1b7f686f77daa230682c 434 SUPERFAMILY SSF55021 346 424 8.33E-10 T 12-10-2018 JDM601_1293 f342f729012d1b7f686f77daa230682c 434 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 7 124 9.0E-23 T 12-10-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 JDM601_1293 f342f729012d1b7f686f77daa230682c 434 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 178 200 - T 12-10-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 JDM601_1293 f342f729012d1b7f686f77daa230682c 434 Pfam PF00742 Homoserine dehydrogenase 132 315 4.3E-68 T 12-10-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 JDM601_1293 f342f729012d1b7f686f77daa230682c 434 SUPERFAMILY SSF51735 1 153 1.6E-30 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_1293 f342f729012d1b7f686f77daa230682c 434 Gene3D G3DSA:3.30.70.260 343 420 1.2E-140 T 12-10-2018 JDM601_1293 f342f729012d1b7f686f77daa230682c 434 Gene3D G3DSA:3.30.360.10 131 342 1.2E-140 T 12-10-2018 JDM601_3037 7b4e15ef5d621ccca67603e3defa6c1e 301 SUPERFAMILY SSF53474 37 287 1.09E-48 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_3037 7b4e15ef5d621ccca67603e3defa6c1e 301 ProSitePatterns PS01174 Lipolytic enzymes "G-D-X-G" family, putative serine active site. 136 148 - T 12-10-2018 IPR033140 Lipase, GDXG, putative serine active site JDM601_3037 7b4e15ef5d621ccca67603e3defa6c1e 301 Gene3D G3DSA:3.40.50.1820 27 292 2.5E-68 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_3037 7b4e15ef5d621ccca67603e3defa6c1e 301 Pfam PF07859 alpha/beta hydrolase fold 68 264 8.5E-46 T 12-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 JDM601_2629 70843d359c6d9b91bc7794e1396cf7b0 173 Gene3D G3DSA:2.40.30.60 2 90 2.8E-24 T 12-10-2018 IPR036976 RimM, N-terminal domain superfamily GO:0006364 JDM601_2629 70843d359c6d9b91bc7794e1396cf7b0 173 Gene3D G3DSA:2.30.30.240 94 172 1.8E-16 T 12-10-2018 JDM601_2629 70843d359c6d9b91bc7794e1396cf7b0 173 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 2 168 23.206 T 12-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 JDM601_2629 70843d359c6d9b91bc7794e1396cf7b0 173 Pfam PF01782 RimM N-terminal domain 5 87 1.2E-23 T 12-10-2018 IPR002676 RimM, N-terminal GO:0006364 JDM601_2629 70843d359c6d9b91bc7794e1396cf7b0 173 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 3 168 5.2E-46 T 12-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 JDM601_2629 70843d359c6d9b91bc7794e1396cf7b0 173 Pfam PF05239 PRC-barrel domain 96 167 1.6E-10 T 12-10-2018 IPR027275 PRC-barrel domain JDM601_2629 70843d359c6d9b91bc7794e1396cf7b0 173 SUPERFAMILY SSF50346 98 168 6.87E-18 T 12-10-2018 IPR011033 PRC-barrel-like superfamily JDM601_2629 70843d359c6d9b91bc7794e1396cf7b0 173 SUPERFAMILY SSF50447 3 91 3.0E-19 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily JDM601_0687 412eb2a6fd89204f8f3591493916826b 475 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 324 343 - T 12-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 JDM601_0687 412eb2a6fd89204f8f3591493916826b 475 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 209 364 2.0E-28 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 JDM601_0687 412eb2a6fd89204f8f3591493916826b 475 Gene3D G3DSA:2.40.110.20 55 208 7.8E-58 T 12-10-2018 JDM601_0687 412eb2a6fd89204f8f3591493916826b 475 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 105 198 3.7E-16 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 JDM601_0687 412eb2a6fd89204f8f3591493916826b 475 Gene3D G3DSA:1.20.140.10 209 366 2.6E-33 T 12-10-2018 JDM601_0687 412eb2a6fd89204f8f3591493916826b 475 SUPERFAMILY SSF56645 12 218 3.53E-33 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 JDM601_0687 412eb2a6fd89204f8f3591493916826b 475 SUPERFAMILY SSF47203 214 368 7.41E-38 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 JDM601_2597 4ce4bad345f784903dd4b21ac64d0ca4 369 SUPERFAMILY SSF102114 111 341 2.22E-19 T 12-10-2018 JDM601_2597 4ce4bad345f784903dd4b21ac64d0ca4 369 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 29 367 1.6E-91 T 12-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 JDM601_2597 4ce4bad345f784903dd4b21ac64d0ca4 369 PIRSF PIRSF006004 11 369 9.5E-113 T 12-10-2018 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 JDM601_2597 4ce4bad345f784903dd4b21ac64d0ca4 369 Gene3D G3DSA:3.20.20.70 81 355 1.4E-92 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JDM601_2597 4ce4bad345f784903dd4b21ac64d0ca4 369 Gene3D G3DSA:1.10.150.530 17 74 3.0E-7 T 12-10-2018 JDM601_2597 4ce4bad345f784903dd4b21ac64d0ca4 369 Pfam PF04055 Radical SAM superfamily 121 295 1.1E-22 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 JDM601_2597 4ce4bad345f784903dd4b21ac64d0ca4 369 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 16 368 64.308 T 12-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 JDM601_2597 4ce4bad345f784903dd4b21ac64d0ca4 369 SMART SM00729 116 342 0.0054 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 JDM601_0155 b1d8f7b7fa2ed863502e631aeee8859a 125 Pfam PF01152 Bacterial-like globin 4 115 9.2E-24 T 12-10-2018 IPR001486 Truncated hemoglobin GO:0019825 JDM601_0155 b1d8f7b7fa2ed863502e631aeee8859a 125 PIRSF PIRSF002030 1 118 8.5E-39 T 12-10-2018 IPR016339 Truncated hemoglobin, group 1 JDM601_0155 b1d8f7b7fa2ed863502e631aeee8859a 125 Gene3D G3DSA:1.10.490.10 2 124 1.1E-38 T 12-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 JDM601_0155 b1d8f7b7fa2ed863502e631aeee8859a 125 SUPERFAMILY SSF46458 4 116 7.72E-32 T 12-10-2018 IPR009050 Globin-like superfamily JDM601_1690 6acf4ac32c210c8b93aa57986afc2053 532 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 11 530 33.198 T 12-10-2018 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 JDM601_1690 6acf4ac32c210c8b93aa57986afc2053 532 PRINTS PR00481 Cytosol aminopeptidase signature 400 415 2.1E-47 T 12-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 JDM601_1690 6acf4ac32c210c8b93aa57986afc2053 532 PRINTS PR00481 Cytosol aminopeptidase signature 291 308 2.1E-47 T 12-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 JDM601_1690 6acf4ac32c210c8b93aa57986afc2053 532 PRINTS PR00481 Cytosol aminopeptidase signature 313 334 2.1E-47 T 12-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 JDM601_1690 6acf4ac32c210c8b93aa57986afc2053 532 PRINTS PR00481 Cytosol aminopeptidase signature 372 392 2.1E-47 T 12-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 JDM601_1690 6acf4ac32c210c8b93aa57986afc2053 532 PRINTS PR00481 Cytosol aminopeptidase signature 350 371 2.1E-47 T 12-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 JDM601_1690 6acf4ac32c210c8b93aa57986afc2053 532 SUPERFAMILY SSF52949 81 197 7.65E-17 T 12-10-2018 JDM601_1690 6acf4ac32c210c8b93aa57986afc2053 532 Gene3D G3DSA:3.40.220.10 13 193 2.0E-14 T 12-10-2018 JDM601_1690 6acf4ac32c210c8b93aa57986afc2053 532 Gene3D G3DSA:3.40.630.10 195 531 4.1E-123 T 12-10-2018 JDM601_1690 6acf4ac32c210c8b93aa57986afc2053 532 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 63 178 1.5E-19 T 12-10-2018 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 JDM601_1690 6acf4ac32c210c8b93aa57986afc2053 532 SUPERFAMILY SSF53187 209 528 1.57E-105 T 12-10-2018 JDM601_1690 6acf4ac32c210c8b93aa57986afc2053 532 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 214 521 1.9E-114 T 12-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 JDM601_1690 6acf4ac32c210c8b93aa57986afc2053 532 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 376 383 - T 12-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 JDM601_0657 d565d2ab734a50890bc72770bfae9e26 55 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 6 55 1.7E-20 T 12-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JDM601_0657 d565d2ab734a50890bc72770bfae9e26 55 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 7 55 19.466 T 12-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JDM601_0657 d565d2ab734a50890bc72770bfae9e26 55 ProSitePatterns PS00582 Ribosomal protein L33 signature. 23 42 - T 12-10-2018 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 JDM601_0657 d565d2ab734a50890bc72770bfae9e26 55 Pfam PF00471 Ribosomal protein L33 10 54 5.8E-23 T 12-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JDM601_0657 d565d2ab734a50890bc72770bfae9e26 55 Gene3D G3DSA:2.20.28.120 3 55 1.2E-24 T 12-10-2018 IPR038584 Ribosomal protein L33 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JDM601_0657 d565d2ab734a50890bc72770bfae9e26 55 SUPERFAMILY SSF57829 5 55 1.89E-19 T 12-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 JDM601_2608 a09296159ae6f46a9412c7b7d85eeea9 139 Pfam PF01047 MarR family 33 89 3.1E-10 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 JDM601_2608 a09296159ae6f46a9412c7b7d85eeea9 139 SUPERFAMILY SSF46785 6 136 4.55E-28 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JDM601_2608 a09296159ae6f46a9412c7b7d85eeea9 139 PRINTS PR00598 Bacterial regulatory protein MarR family signature 116 136 1.6E-5 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 JDM601_2608 a09296159ae6f46a9412c7b7d85eeea9 139 PRINTS PR00598 Bacterial regulatory protein MarR family signature 67 82 1.6E-5 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 JDM601_2608 a09296159ae6f46a9412c7b7d85eeea9 139 PRINTS PR00598 Bacterial regulatory protein MarR family signature 50 66 1.6E-5 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 JDM601_2608 a09296159ae6f46a9412c7b7d85eeea9 139 PRINTS PR00598 Bacterial regulatory protein MarR family signature 86 102 1.6E-5 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 JDM601_2608 a09296159ae6f46a9412c7b7d85eeea9 139 Gene3D G3DSA:1.10.10.10 3 139 8.9E-32 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JDM601_2608 a09296159ae6f46a9412c7b7d85eeea9 139 SMART SM00347 26 126 1.7E-21 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 JDM601_2470 9e1a3c01552de3163ec1e5dde7678a26 222 Gene3D G3DSA:3.40.830.10 94 222 2.6E-18 T 12-10-2018 JDM601_2470 9e1a3c01552de3163ec1e5dde7678a26 222 SUPERFAMILY SSF53213 103 221 1.11E-5 T 12-10-2018 JDM601_2037 b36cef5b9e9418eddad56a8ab08c89e4 240 Pfam PF07729 FCD domain 104 222 9.8E-9 T 12-10-2018 IPR011711 GntR, C-terminal JDM601_2037 b36cef5b9e9418eddad56a8ab08c89e4 240 SUPERFAMILY SSF48008 101 232 6.02E-10 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal JDM601_2037 b36cef5b9e9418eddad56a8ab08c89e4 240 Gene3D G3DSA:1.10.10.10 5 82 1.4E-20 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JDM601_2037 b36cef5b9e9418eddad56a8ab08c89e4 240 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 34 48 9.6E-10 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 JDM601_2037 b36cef5b9e9418eddad56a8ab08c89e4 240 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 48 64 9.6E-10 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 JDM601_2037 b36cef5b9e9418eddad56a8ab08c89e4 240 SUPERFAMILY SSF46785 7 78 4.21E-20 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JDM601_2037 b36cef5b9e9418eddad56a8ab08c89e4 240 SMART SM00345 15 74 4.3E-14 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 JDM601_2037 b36cef5b9e9418eddad56a8ab08c89e4 240 Gene3D G3DSA:1.20.120.530 83 235 8.1E-15 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal JDM601_2037 b36cef5b9e9418eddad56a8ab08c89e4 240 SMART SM00895 103 224 2.8E-7 T 12-10-2018 IPR011711 GntR, C-terminal JDM601_2037 b36cef5b9e9418eddad56a8ab08c89e4 240 Pfam PF00392 Bacterial regulatory proteins, gntR family 13 74 1.3E-18 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 JDM601_1745 af1959bc73882b9fa62d4967b70c76dd 315 Hamap MF_00911 Cell division protein FtsQ [ftsQ]. 95 315 17.969 T 12-10-2018 IPR026579 Cell division protein FtsQ GO:0090529 JDM601_1745 af1959bc73882b9fa62d4967b70c76dd 315 Pfam PF03799 Cell division protein FtsQ 206 299 2.2E-8 T 12-10-2018 IPR005548 Cell division protein FtsQ/DivIB JDM601_1745 af1959bc73882b9fa62d4967b70c76dd 315 Pfam PF08478 POTRA domain, FtsQ-type 126 193 1.9E-14 T 12-10-2018 IPR013685 POTRA domain, FtsQ-type JDM601_3582 65ee46ddd934f5afff23124cd2737639 717 Gene3D G3DSA:3.20.20.80 289 635 1.9E-149 T 12-10-2018 JDM601_3582 65ee46ddd934f5afff23124cd2737639 717 Gene3D G3DSA:2.60.40.1180 279 714 1.9E-149 T 12-10-2018 IPR013780 Glycosyl hydrolase, all-beta JDM601_3582 65ee46ddd934f5afff23124cd2737639 717 Pfam PF00150 Cellulase (glycosyl hydrolase family 5) 310 601 1.8E-30 T 12-10-2018 IPR001547 Glycoside hydrolase, family 5 GO:0004553|GO:0005975 JDM601_3582 65ee46ddd934f5afff23124cd2737639 717 SUPERFAMILY SSF51445 270 603 3.48E-50 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily JDM601_2770 98f45279a2dba7e64c6cafeb71355a8d 408 Gene3D G3DSA:3.30.70.260 93 176 1.7E-30 T 12-10-2018 JDM601_2770 98f45279a2dba7e64c6cafeb71355a8d 408 Pfam PF12710 haloacid dehalogenase-like hydrolase 181 348 4.2E-30 T 12-10-2018 JDM601_2770 98f45279a2dba7e64c6cafeb71355a8d 408 Gene3D G3DSA:3.40.50.1000 179 370 5.0E-72 T 12-10-2018 IPR023214 HAD superfamily JDM601_2770 98f45279a2dba7e64c6cafeb71355a8d 408 SUPERFAMILY SSF55021 6 84 5.73E-8 T 12-10-2018 JDM601_2770 98f45279a2dba7e64c6cafeb71355a8d 408 Pfam PF13740 ACT domain 6 79 3.1E-18 T 12-10-2018 JDM601_2770 98f45279a2dba7e64c6cafeb71355a8d 408 Gene3D G3DSA:3.30.70.260 2 92 3.7E-17 T 12-10-2018 JDM601_2770 98f45279a2dba7e64c6cafeb71355a8d 408 Gene3D G3DSA:1.10.150.210 190 250 5.0E-72 T 12-10-2018 IPR023190 Phosphoserine phosphatase, domain 2 GO:0004647|GO:0006564 KEGG: 00260+3.1.3.3|KEGG: 00680+3.1.3.3|Reactome: R-HSA-977347 JDM601_2770 98f45279a2dba7e64c6cafeb71355a8d 408 SUPERFAMILY SSF56784 178 387 1.27E-51 T 12-10-2018 IPR036412 HAD-like superfamily JDM601_2770 98f45279a2dba7e64c6cafeb71355a8d 408 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 180 350 7.0E-30 T 12-10-2018 JDM601_2770 98f45279a2dba7e64c6cafeb71355a8d 408 TIGRFAM TIGR00338 serB: phosphoserine phosphatase SerB 165 383 4.9E-75 T 12-10-2018 JDM601_2724 cd6b0bb915fc3e363f2dd08f744dba38 212 Gene3D G3DSA:1.10.357.10 4 210 8.1E-28 T 12-10-2018 JDM601_2724 cd6b0bb915fc3e363f2dd08f744dba38 212 SUPERFAMILY SSF46689 7 92 2.1E-17 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JDM601_2724 cd6b0bb915fc3e363f2dd08f744dba38 212 Pfam PF00440 Bacterial regulatory proteins, tetR family 21 66 1.1E-11 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_2724 cd6b0bb915fc3e363f2dd08f744dba38 212 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 42 65 3.5E-6 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_2724 cd6b0bb915fc3e363f2dd08f744dba38 212 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 21 34 3.5E-6 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_0072 fa8b36c28dc0c5e6b46e4b8825acb42b 486 Gene3D G3DSA:3.40.720.10 157 334 1.2E-22 T 12-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 JDM601_0072 fa8b36c28dc0c5e6b46e4b8825acb42b 486 Gene3D G3DSA:3.40.720.10 38 148 3.0E-11 T 12-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 JDM601_0072 fa8b36c28dc0c5e6b46e4b8825acb42b 486 SUPERFAMILY SSF53649 41 314 3.93E-23 T 12-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 JDM601_0072 fa8b36c28dc0c5e6b46e4b8825acb42b 486 Pfam PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase 44 124 1.5E-8 T 12-10-2018 IPR002591 Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase GO:0003824 JDM601_2876 8a6e4b8e83e46ebd5265a5246cb8c08a 330 SUPERFAMILY SSF51735 4 158 6.67E-49 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_2876 8a6e4b8e83e46ebd5265a5246cb8c08a 330 Gene3D G3DSA:3.30.360.10 125 323 4.4E-50 T 12-10-2018 JDM601_2876 8a6e4b8e83e46ebd5265a5246cb8c08a 330 SUPERFAMILY SSF55347 131 296 1.64E-36 T 12-10-2018 JDM601_2876 8a6e4b8e83e46ebd5265a5246cb8c08a 330 Gene3D G3DSA:3.40.50.720 4 124 5.8E-34 T 12-10-2018 JDM601_2876 8a6e4b8e83e46ebd5265a5246cb8c08a 330 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 6 124 1.5E-19 T 12-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 JDM601_0824 6269a60a57a83e269056b77b0baca002 572 Pfam PF00664 ABC transporter transmembrane region 2 269 1.7E-40 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 JDM601_0824 6269a60a57a83e269056b77b0baca002 572 Gene3D G3DSA:3.40.50.300 307 565 1.4E-72 T 12-10-2018 JDM601_0824 6269a60a57a83e269056b77b0baca002 572 SUPERFAMILY SSF52540 306 553 1.36E-69 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_0824 6269a60a57a83e269056b77b0baca002 572 Pfam PF00005 ABC transporter 332 478 7.0E-29 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JDM601_0824 6269a60a57a83e269056b77b0baca002 572 Gene3D G3DSA:1.20.1560.10 1 299 4.7E-71 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JDM601_0824 6269a60a57a83e269056b77b0baca002 572 SMART SM00382 341 532 7.3E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain JDM601_0824 6269a60a57a83e269056b77b0baca002 572 ProSitePatterns PS00211 ABC transporters family signature. 452 466 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JDM601_0824 6269a60a57a83e269056b77b0baca002 572 SUPERFAMILY SSF90123 3 298 1.7E-67 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JDM601_3551 cd7f7327ce0c7e3009ceadc9d071e786 363 Gene3D G3DSA:3.30.1330.10 12 176 5.7E-60 T 12-10-2018 IPR036921 PurM-like, N-terminal domain superfamily JDM601_3551 cd7f7327ce0c7e3009ceadc9d071e786 363 SUPERFAMILY SSF56042 178 346 4.04E-52 T 12-10-2018 IPR036676 PurM-like, C-terminal domain superfamily JDM601_3551 cd7f7327ce0c7e3009ceadc9d071e786 363 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 13 357 40.744 T 12-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 JDM601_3551 cd7f7327ce0c7e3009ceadc9d071e786 363 Pfam PF02769 AIR synthase related protein, C-terminal domain 182 346 6.2E-33 T 12-10-2018 IPR010918 PurM-like, C-terminal domain JDM601_3551 cd7f7327ce0c7e3009ceadc9d071e786 363 Gene3D G3DSA:3.90.650.10 178 356 6.4E-57 T 12-10-2018 IPR036676 PurM-like, C-terminal domain superfamily JDM601_3551 cd7f7327ce0c7e3009ceadc9d071e786 363 SUPERFAMILY SSF55326 13 175 1.92E-45 T 12-10-2018 IPR036921 PurM-like, N-terminal domain superfamily JDM601_3551 cd7f7327ce0c7e3009ceadc9d071e786 363 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 13 343 7.8E-140 T 12-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 JDM601_3551 cd7f7327ce0c7e3009ceadc9d071e786 363 Pfam PF00586 AIR synthase related protein, N-terminal domain 67 170 7.5E-16 T 12-10-2018 IPR016188 PurM-like, N-terminal domain JDM601_0748 175a3f3bbe2a18d08030824e58d95a3c 446 SUPERFAMILY SSF51338 19 442 4.32E-7 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 JDM601_0748 175a3f3bbe2a18d08030824e58d95a3c 446 Gene3D G3DSA:2.30.40.10 28 47 2.6E-25 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 JDM601_0748 175a3f3bbe2a18d08030824e58d95a3c 446 Gene3D G3DSA:3.20.20.140 48 220 2.6E-25 T 12-10-2018 JDM601_0748 175a3f3bbe2a18d08030824e58d95a3c 446 Gene3D G3DSA:3.10.310.70 66 160 2.6E-25 T 12-10-2018 JDM601_0748 175a3f3bbe2a18d08030824e58d95a3c 446 Gene3D G3DSA:3.20.20.140 236 399 8.8E-30 T 12-10-2018 JDM601_0748 175a3f3bbe2a18d08030824e58d95a3c 446 Pfam PF07969 Amidohydrolase family 36 440 3.3E-35 T 12-10-2018 IPR013108 Amidohydrolase 3 JDM601_0748 175a3f3bbe2a18d08030824e58d95a3c 446 SUPERFAMILY SSF51556 47 396 8.01E-19 T 12-10-2018 IPR032466 Metal-dependent hydrolase JDM601_1599 33b608b013159ec3153fa74d5c658447 334 Pfam PF13602 Zinc-binding dehydrogenase 183 332 1.5E-16 T 12-10-2018 JDM601_1599 33b608b013159ec3153fa74d5c658447 334 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 141 162 - T 12-10-2018 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 JDM601_1599 33b608b013159ec3153fa74d5c658447 334 SMART SM00829 10 332 6.1E-45 T 12-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 JDM601_1599 33b608b013159ec3153fa74d5c658447 334 Gene3D G3DSA:3.40.50.720 121 262 4.0E-88 T 12-10-2018 JDM601_1599 33b608b013159ec3153fa74d5c658447 334 SUPERFAMILY SSF51735 113 239 9.37E-36 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_1599 33b608b013159ec3153fa74d5c658447 334 SUPERFAMILY SSF50129 1 142 1.11E-35 T 12-10-2018 IPR011032 GroES-like superfamily JDM601_1599 33b608b013159ec3153fa74d5c658447 334 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 89 5.9E-8 T 12-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 JDM601_1599 33b608b013159ec3153fa74d5c658447 334 Gene3D G3DSA:3.90.180.10 14 332 4.0E-88 T 12-10-2018 JDM601_3503 e71b68b9f7cd4ab4d1e25295422b6297 429 SUPERFAMILY SSF50022 12 169 2.23E-41 T 12-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 JDM601_3503 e71b68b9f7cd4ab4d1e25295422b6297 429 Gene3D G3DSA:3.90.380.10 31 388 1.7E-57 T 12-10-2018 JDM601_3503 e71b68b9f7cd4ab4d1e25295422b6297 429 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 190 417 1.0E-41 T 12-10-2018 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0044237|GO:0051537|GO:0055114 JDM601_3503 e71b68b9f7cd4ab4d1e25295422b6297 429 SUPERFAMILY SSF55961 172 419 1.18E-38 T 12-10-2018 JDM601_3503 e71b68b9f7cd4ab4d1e25295422b6297 429 Pfam PF00355 Rieske [2Fe-2S] domain 47 136 4.5E-12 T 12-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 JDM601_3503 e71b68b9f7cd4ab4d1e25295422b6297 429 Gene3D G3DSA:2.102.10.10 44 174 1.7E-57 T 12-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 JDM601_3503 e71b68b9f7cd4ab4d1e25295422b6297 429 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 31 56 8.2E-9 T 12-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 JDM601_3503 e71b68b9f7cd4ab4d1e25295422b6297 429 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 154 180 8.2E-9 T 12-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 JDM601_0982 462b0e8dbc769cb06600058b3df2022b 200 Pfam PF00440 Bacterial regulatory proteins, tetR family 10 54 1.5E-17 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_0982 462b0e8dbc769cb06600058b3df2022b 200 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 31 54 1.5E-10 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_0982 462b0e8dbc769cb06600058b3df2022b 200 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 10 23 1.5E-10 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_0982 462b0e8dbc769cb06600058b3df2022b 200 Gene3D G3DSA:1.10.357.10 1 196 5.5E-47 T 12-10-2018 JDM601_0982 462b0e8dbc769cb06600058b3df2022b 200 ProSitePatterns PS01081 TetR-type HTH domain signature. 22 52 - T 12-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site JDM601_0982 462b0e8dbc769cb06600058b3df2022b 200 SUPERFAMILY SSF46689 3 76 3.64E-19 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JDM601_0982 462b0e8dbc769cb06600058b3df2022b 200 SUPERFAMILY SSF48498 82 190 5.63E-9 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily JDM601_1534 f2a087dee39f92b1636c88d4ce97cdfc 391 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 227 373 3.2E-32 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 JDM601_1534 f2a087dee39f92b1636c88d4ce97cdfc 391 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 120 212 2.9E-14 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 JDM601_1534 f2a087dee39f92b1636c88d4ce97cdfc 391 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 13 116 1.9E-4 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 JDM601_1534 f2a087dee39f92b1636c88d4ce97cdfc 391 SUPERFAMILY SSF56645 3 224 2.09E-30 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 JDM601_1534 f2a087dee39f92b1636c88d4ce97cdfc 391 SUPERFAMILY SSF47203 227 373 1.18E-26 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 JDM601_1534 f2a087dee39f92b1636c88d4ce97cdfc 391 Gene3D G3DSA:1.20.140.10 228 373 7.9E-34 T 12-10-2018 JDM601_1534 f2a087dee39f92b1636c88d4ce97cdfc 391 Gene3D G3DSA:1.10.540.10 3 118 4.9E-35 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 JDM601_1534 f2a087dee39f92b1636c88d4ce97cdfc 391 Gene3D G3DSA:2.40.110.10 119 225 5.3E-21 T 12-10-2018 JDM601_2647 5be30361f848f966bf49395c7d71b2c6 421 SMART SM00963 125 205 1.3E-14 T 12-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 JDM601_2647 5be30361f848f966bf49395c7d71b2c6 421 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 149 420 7.7E-105 T 12-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 JDM601_2647 5be30361f848f966bf49395c7d71b2c6 421 Gene3D G3DSA:1.20.120.140 123 419 2.0E-96 T 12-10-2018 JDM601_2647 5be30361f848f966bf49395c7d71b2c6 421 SUPERFAMILY SSF47364 120 199 3.27E-15 T 12-10-2018 IPR036225 SRP/SRP receptor, N-terminal Reactome: R-HSA-1799339 JDM601_2647 5be30361f848f966bf49395c7d71b2c6 421 SUPERFAMILY SSF52540 218 420 1.14E-47 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_2647 5be30361f848f966bf49395c7d71b2c6 421 Pfam PF00448 SRP54-type protein, GTPase domain 222 421 1.1E-72 T 12-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 JDM601_2647 5be30361f848f966bf49395c7d71b2c6 421 Gene3D G3DSA:3.40.50.300 222 409 2.0E-96 T 12-10-2018 JDM601_2647 5be30361f848f966bf49395c7d71b2c6 421 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 148 421 57.794 T 12-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 JDM601_2647 5be30361f848f966bf49395c7d71b2c6 421 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 394 407 - T 12-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 JDM601_2647 5be30361f848f966bf49395c7d71b2c6 421 SMART SM00382 221 397 3.4E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain JDM601_2647 5be30361f848f966bf49395c7d71b2c6 421 SMART SM00962 222 421 3.5E-101 T 12-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 JDM601_2647 5be30361f848f966bf49395c7d71b2c6 421 Pfam PF02881 SRP54-type protein, helical bundle domain 140 200 1.0E-6 T 12-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 JDM601_1542 303834e1bf670843c43867078b0f7970 2175 SUPERFAMILY SSF52777 45 223 1.56E-35 T 12-10-2018 JDM601_1542 303834e1bf670843c43867078b0f7970 2175 Gene3D G3DSA:3.30.300.30 1953 2057 1.7E-29 T 12-10-2018 JDM601_1542 303834e1bf670843c43867078b0f7970 2175 Gene3D G3DSA:3.30.300.30 875 978 2.6E-31 T 12-10-2018 JDM601_1542 303834e1bf670843c43867078b0f7970 2175 SUPERFAMILY SSF52777 1270 1522 1.67E-49 T 12-10-2018 JDM601_1542 303834e1bf670843c43867078b0f7970 2175 Pfam PF00501 AMP-binding enzyme 1567 1959 1.7E-80 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 JDM601_1542 303834e1bf670843c43867078b0f7970 2175 Pfam PF00501 AMP-binding enzyme 497 880 2.3E-95 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 JDM601_1542 303834e1bf670843c43867078b0f7970 2175 SMART SM00823 Phosphopantetheine attachment site 2072 2137 2.9E-5 T 12-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 JDM601_1542 303834e1bf670843c43867078b0f7970 2175 SMART SM00823 Phosphopantetheine attachment site 989 1061 6.1E-5 T 12-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 JDM601_1542 303834e1bf670843c43867078b0f7970 2175 Gene3D G3DSA:3.30.559.30 214 472 4.1E-102 T 12-10-2018 JDM601_1542 303834e1bf670843c43867078b0f7970 2175 Gene3D G3DSA:3.30.559.10 45 402 4.1E-102 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 JDM601_1542 303834e1bf670843c43867078b0f7970 2175 SUPERFAMILY SSF56801 1519 2082 3.53E-126 T 12-10-2018 JDM601_1542 303834e1bf670843c43867078b0f7970 2175 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1016 1031 - T 12-10-2018 IPR006162 Phosphopantetheine attachment site JDM601_1542 303834e1bf670843c43867078b0f7970 2175 Gene3D G3DSA:3.30.559.10 1082 1465 3.1E-125 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 JDM601_1542 303834e1bf670843c43867078b0f7970 2175 Gene3D G3DSA:3.30.559.30 1266 1524 3.1E-125 T 12-10-2018 JDM601_1542 303834e1bf670843c43867078b0f7970 2175 Pfam PF13193 AMP-binding enzyme C-terminal domain 888 967 5.5E-9 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain JDM601_1542 303834e1bf670843c43867078b0f7970 2175 Pfam PF13193 AMP-binding enzyme C-terminal domain 1967 2044 2.6E-7 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain JDM601_1542 303834e1bf670843c43867078b0f7970 2175 Pfam PF00668 Condensation domain 1081 1538 3.4E-67 T 12-10-2018 IPR001242 Condensation domain JDM601_1542 303834e1bf670843c43867078b0f7970 2175 Pfam PF00668 Condensation domain 43 473 3.9E-59 T 12-10-2018 IPR001242 Condensation domain JDM601_1542 303834e1bf670843c43867078b0f7970 2175 SUPERFAMILY SSF52777 214 459 2.45E-47 T 12-10-2018 JDM601_1542 303834e1bf670843c43867078b0f7970 2175 ProSitePatterns PS00012 Phosphopantetheine attachment site. 2093 2108 - T 12-10-2018 IPR006162 Phosphopantetheine attachment site JDM601_1542 303834e1bf670843c43867078b0f7970 2175 Gene3D G3DSA:3.40.50.12780 483 874 4.4E-129 T 12-10-2018 JDM601_1542 303834e1bf670843c43867078b0f7970 2175 SUPERFAMILY SSF47336 985 1094 2.75E-19 T 12-10-2018 IPR036736 ACP-like superfamily JDM601_1542 303834e1bf670843c43867078b0f7970 2175 SUPERFAMILY SSF47336 2063 2131 5.63E-18 T 12-10-2018 IPR036736 ACP-like superfamily JDM601_1542 303834e1bf670843c43867078b0f7970 2175 ProSitePatterns PS00455 Putative AMP-binding domain signature. 1706 1717 - T 12-10-2018 IPR020845 AMP-binding, conserved site JDM601_1542 303834e1bf670843c43867078b0f7970 2175 Pfam PF00550 Phosphopantetheine attachment site 994 1057 8.8E-14 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain JDM601_1542 303834e1bf670843c43867078b0f7970 2175 Pfam PF00550 Phosphopantetheine attachment site 2071 2131 1.9E-12 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain JDM601_1542 303834e1bf670843c43867078b0f7970 2175 SUPERFAMILY SSF56801 455 1003 7.33E-150 T 12-10-2018 JDM601_1542 303834e1bf670843c43867078b0f7970 2175 Gene3D G3DSA:3.40.50.12780 1556 1951 2.8E-110 T 12-10-2018 JDM601_1542 303834e1bf670843c43867078b0f7970 2175 Gene3D G3DSA:1.10.1200.10 979 1063 1.4E-27 T 12-10-2018 IPR036736 ACP-like superfamily JDM601_1542 303834e1bf670843c43867078b0f7970 2175 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 516 904 2.2E-122 T 12-10-2018 IPR010071 Amino acid adenylation domain JDM601_1542 303834e1bf670843c43867078b0f7970 2175 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 1579 1982 2.5E-103 T 12-10-2018 IPR010071 Amino acid adenylation domain JDM601_1542 303834e1bf670843c43867078b0f7970 2175 ProSitePatterns PS00455 Putative AMP-binding domain signature. 625 636 - T 12-10-2018 IPR020845 AMP-binding, conserved site JDM601_1542 303834e1bf670843c43867078b0f7970 2175 SUPERFAMILY SSF52777 1076 1282 7.34E-43 T 12-10-2018 JDM601_1542 303834e1bf670843c43867078b0f7970 2175 Gene3D G3DSA:1.10.1200.10 2058 2138 1.7E-23 T 12-10-2018 IPR036736 ACP-like superfamily JDM601_1637 cc92b43f57ae8a34ecb3e5c1ab37a281 600 SUPERFAMILY SSF51556 59 497 5.79E-38 T 12-10-2018 IPR032466 Metal-dependent hydrolase JDM601_1637 cc92b43f57ae8a34ecb3e5c1ab37a281 600 Pfam PF07969 Amidohydrolase family 47 235 1.4E-11 T 12-10-2018 IPR013108 Amidohydrolase 3 JDM601_1637 cc92b43f57ae8a34ecb3e5c1ab37a281 600 SUPERFAMILY SSF51338 3 569 5.1E-18 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 JDM601_1637 cc92b43f57ae8a34ecb3e5c1ab37a281 600 Gene3D G3DSA:3.20.20.140 58 323 4.2E-40 T 12-10-2018 JDM601_3230 6d74eaeecdf7ca1485282d4d174688d0 301 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 163 284 6.0E-39 T 12-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 JDM601_3230 6d74eaeecdf7ca1485282d4d174688d0 301 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 4 17 - T 12-10-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 JDM601_3230 6d74eaeecdf7ca1485282d4d174688d0 301 PIRSF PIRSF000103 1 293 9.1E-65 T 12-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 JDM601_3230 6d74eaeecdf7ca1485282d4d174688d0 301 SUPERFAMILY SSF51735 2 158 7.7E-34 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_3230 6d74eaeecdf7ca1485282d4d174688d0 301 Gene3D G3DSA:3.40.50.720 1 160 1.6E-41 T 12-10-2018 JDM601_3230 6d74eaeecdf7ca1485282d4d174688d0 301 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 2 157 8.7E-38 T 12-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 JDM601_3230 6d74eaeecdf7ca1485282d4d174688d0 301 Gene3D G3DSA:1.10.1040.10 163 293 2.2E-38 T 12-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 JDM601_3230 6d74eaeecdf7ca1485282d4d174688d0 301 SUPERFAMILY SSF48179 162 291 1.13E-33 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 JDM601_3679 d6a4a2bd3f79c4c341c563549bafa7c3 344 TIGRFAM TIGR03217 4OH_2_O_val_ald: 4-hydroxy-2-oxovalerate aldolase 8 339 5.5E-153 T 12-10-2018 IPR017629 4-hydroxy-2-oxovalerate aldolase GO:0008701|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 JDM601_3679 d6a4a2bd3f79c4c341c563549bafa7c3 344 Hamap MF_01656 4-hydroxy-2-oxovalerate aldolase [mhpE]. 1 344 175.418 T 12-10-2018 IPR017629 4-hydroxy-2-oxovalerate aldolase GO:0008701|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 JDM601_3679 d6a4a2bd3f79c4c341c563549bafa7c3 344 Pfam PF07836 DmpG-like communication domain 275 336 1.2E-27 T 12-10-2018 IPR012425 DmpG-like communication GO:0016833|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 JDM601_3679 d6a4a2bd3f79c4c341c563549bafa7c3 344 Gene3D G3DSA:1.10.8.60 277 344 1.7E-31 T 12-10-2018 JDM601_3679 d6a4a2bd3f79c4c341c563549bafa7c3 344 ProDom PD005364 ALDOLASE 4-HYDROXY-2-OXOVALERATE LYASE PYRUVATE 4.1.3.- PLASMID HMG-COA LYASE-LIKE TRANSFERASE HOA 277 335 3.0E-26 T 12-10-2018 IPR012425 DmpG-like communication GO:0016833|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 JDM601_3679 d6a4a2bd3f79c4c341c563549bafa7c3 344 SUPERFAMILY SSF51569 7 270 1.83E-59 T 12-10-2018 JDM601_3679 d6a4a2bd3f79c4c341c563549bafa7c3 344 Gene3D G3DSA:3.20.20.70 3 270 4.6E-97 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JDM601_3679 d6a4a2bd3f79c4c341c563549bafa7c3 344 SUPERFAMILY SSF89000 290 339 9.81E-16 T 12-10-2018 JDM601_3679 d6a4a2bd3f79c4c341c563549bafa7c3 344 Pfam PF00682 HMGL-like 8 266 8.0E-50 T 12-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 JDM601_3750 57cacae52cb773deaf6939a5b5ecb483 302 Pfam PF00106 short chain dehydrogenase 9 204 4.7E-41 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3750 57cacae52cb773deaf6939a5b5ecb483 302 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 218 238 5.6E-24 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3750 57cacae52cb773deaf6939a5b5ecb483 302 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 192 209 5.6E-24 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3750 57cacae52cb773deaf6939a5b5ecb483 302 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 190 5.6E-24 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3750 57cacae52cb773deaf6939a5b5ecb483 302 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 92 103 5.6E-24 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3750 57cacae52cb773deaf6939a5b5ecb483 302 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 5.6E-24 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3750 57cacae52cb773deaf6939a5b5ecb483 302 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 145 161 5.6E-24 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3750 57cacae52cb773deaf6939a5b5ecb483 302 Gene3D G3DSA:3.40.50.720 4 297 4.6E-73 T 12-10-2018 JDM601_3750 57cacae52cb773deaf6939a5b5ecb483 302 SUPERFAMILY SSF51735 4 260 9.32E-59 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_3750 57cacae52cb773deaf6939a5b5ecb483 302 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 158 186 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 JDM601_3750 57cacae52cb773deaf6939a5b5ecb483 302 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 92 103 9.1E-10 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3750 57cacae52cb773deaf6939a5b5ecb483 302 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 159 9.1E-10 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3750 57cacae52cb773deaf6939a5b5ecb483 302 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 171 190 9.1E-10 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3750 57cacae52cb773deaf6939a5b5ecb483 302 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 8 210 4.6E-4 T 12-10-2018 JDM601_1410 c1006d69c40f8c9be3428c67eb8de897 273 Pfam PF04072 Leucine carboxyl methyltransferase 32 176 9.7E-14 T 12-10-2018 IPR007213 Methyltransferase Ppm1/Ppm2/Tcmp GO:0008168|GO:0032259 JDM601_1410 c1006d69c40f8c9be3428c67eb8de897 273 SUPERFAMILY SSF53335 14 246 1.56E-52 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JDM601_1410 c1006d69c40f8c9be3428c67eb8de897 273 Gene3D G3DSA:3.40.50.150 2 226 3.7E-35 T 12-10-2018 JDM601_1410 c1006d69c40f8c9be3428c67eb8de897 273 PIRSF PIRSF028177 2 271 2.2E-69 T 12-10-2018 IPR016874 Tetracenomycin polyketide synthesis O-methyltransferase TcmP GO:0017000|GO:1901106 JDM601_3626 4d096bb8c2bb5f4f98ebb7220c989ed6 393 TIGRFAM TIGR00996 Mtu_fam_mce: virulence factor Mce family protein 20 312 1.5E-70 T 12-10-2018 IPR005693 Virulence factor Mce protein JDM601_3626 4d096bb8c2bb5f4f98ebb7220c989ed6 393 Pfam PF02470 MlaD protein 48 126 5.5E-11 T 12-10-2018 IPR003399 Mce/MlaD JDM601_2350 cef7666342b2b6ad59eb7aa6cc3fae56 222 Pfam PF02720 Domain of unknown function (DUF222) 8 66 3.8E-8 T 12-10-2018 IPR003870 Domain of unknown function DUF222 JDM601_2350 cef7666342b2b6ad59eb7aa6cc3fae56 222 SMART SM00507 57 108 3.5E-6 T 12-10-2018 IPR003615 HNH nuclease JDM601_1636 2812dba2be0947bdb37a03066d020489 357 Gene3D G3DSA:3.40.50.720 163 300 4.1E-117 T 12-10-2018 JDM601_1636 2812dba2be0947bdb37a03066d020489 357 Pfam PF00107 Zinc-binding dehydrogenase 186 315 7.4E-27 T 12-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 JDM601_1636 2812dba2be0947bdb37a03066d020489 357 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 144 2.1E-26 T 12-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 JDM601_1636 2812dba2be0947bdb37a03066d020489 357 SUPERFAMILY SSF50129 2 182 1.98E-51 T 12-10-2018 IPR011032 GroES-like superfamily JDM601_1636 2812dba2be0947bdb37a03066d020489 357 TIGRFAM TIGR03451 mycoS_dep_FDH: S-(hydroxymethyl)mycothiol dehydrogenase 1 357 6.0E-208 T 12-10-2018 IPR017816 S-(hydroxymethyl)mycothiol dehydrogenase MetaCyc: PWY-7908 JDM601_1636 2812dba2be0947bdb37a03066d020489 357 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 58 72 - T 12-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 JDM601_1636 2812dba2be0947bdb37a03066d020489 357 SUPERFAMILY SSF50129 307 356 1.79E-8 T 12-10-2018 IPR011032 GroES-like superfamily JDM601_1636 2812dba2be0947bdb37a03066d020489 357 SUPERFAMILY SSF51735 149 322 2.19E-43 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_1636 2812dba2be0947bdb37a03066d020489 357 Gene3D G3DSA:3.90.180.10 7 354 4.1E-117 T 12-10-2018 JDM601_3279 f7a7ef5b0f6c209611a700557cfa7935 183 SUPERFAMILY SSF64263 1 117 1.03E-47 T 12-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JDM601_3279 f7a7ef5b0f6c209611a700557cfa7935 183 Pfam PF01196 Ribosomal protein L17 20 116 2.5E-37 T 12-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JDM601_3279 f7a7ef5b0f6c209611a700557cfa7935 183 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 27.265 T 12-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JDM601_3279 f7a7ef5b0f6c209611a700557cfa7935 183 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 12-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JDM601_3279 f7a7ef5b0f6c209611a700557cfa7935 183 Gene3D G3DSA:3.90.1030.10 1 117 3.5E-47 T 12-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JDM601_3279 f7a7ef5b0f6c209611a700557cfa7935 183 TIGRFAM TIGR00059 L17: ribosomal protein bL17 8 116 3.5E-43 T 12-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JDM601_3978 b7c413dad1015081532cf734f4ed1610 764 PRINTS PR01217 Proline rich extensin signature 457 482 1.2E-9 T 12-10-2018 JDM601_3978 b7c413dad1015081532cf734f4ed1610 764 PRINTS PR01217 Proline rich extensin signature 377 398 1.2E-9 T 12-10-2018 JDM601_3978 b7c413dad1015081532cf734f4ed1610 764 PRINTS PR01217 Proline rich extensin signature 401 417 1.2E-9 T 12-10-2018 JDM601_3978 b7c413dad1015081532cf734f4ed1610 764 PRINTS PR01217 Proline rich extensin signature 365 377 1.2E-9 T 12-10-2018 JDM601_3978 b7c413dad1015081532cf734f4ed1610 764 PRINTS PR01217 Proline rich extensin signature 338 354 1.2E-9 T 12-10-2018 JDM601_1938 9ec868f1aa324f51d97aa3dcbfacd729 482 SUPERFAMILY SSF51735 10 183 1.01E-51 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_1938 9ec868f1aa324f51d97aa3dcbfacd729 482 Gene3D G3DSA:3.40.50.720 7 186 3.9E-53 T 12-10-2018 JDM601_1938 9ec868f1aa324f51d97aa3dcbfacd729 482 PIRSF PIRSF000109 5 482 4.1E-198 T 12-10-2018 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 JDM601_1938 9ec868f1aa324f51d97aa3dcbfacd729 482 Pfam PF00393 6-phosphogluconate dehydrogenase, C-terminal domain 185 473 1.8E-122 T 12-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 JDM601_1938 9ec868f1aa324f51d97aa3dcbfacd729 482 TIGRFAM TIGR00873 gnd: 6-phosphogluconate dehydrogenase (decarboxylating) 11 474 2.9E-212 T 12-10-2018 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 JDM601_1938 9ec868f1aa324f51d97aa3dcbfacd729 482 Gene3D G3DSA:1.10.1040.10 187 441 2.3E-98 T 12-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 JDM601_1938 9ec868f1aa324f51d97aa3dcbfacd729 482 Gene3D G3DSA:1.20.5.320 443 474 5.8E-16 T 12-10-2018 JDM601_1938 9ec868f1aa324f51d97aa3dcbfacd729 482 SMART SM01350 185 474 2.9E-200 T 12-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 JDM601_1938 9ec868f1aa324f51d97aa3dcbfacd729 482 SUPERFAMILY SSF48179 183 477 1.77E-117 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 JDM601_1938 9ec868f1aa324f51d97aa3dcbfacd729 482 ProSitePatterns PS00461 6-phosphogluconate dehydrogenase signature. 260 272 - T 12-10-2018 IPR006184 6-phosphogluconate-binding site GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 JDM601_1938 9ec868f1aa324f51d97aa3dcbfacd729 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 73 102 3.2E-81 T 12-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 JDM601_1938 9ec868f1aa324f51d97aa3dcbfacd729 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 126 151 3.2E-81 T 12-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 JDM601_1938 9ec868f1aa324f51d97aa3dcbfacd729 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 10 33 3.2E-81 T 12-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 JDM601_1938 9ec868f1aa324f51d97aa3dcbfacd729 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 363 385 3.2E-81 T 12-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 JDM601_1938 9ec868f1aa324f51d97aa3dcbfacd729 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 256 283 3.2E-81 T 12-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 JDM601_1938 9ec868f1aa324f51d97aa3dcbfacd729 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 174 202 3.2E-81 T 12-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 JDM601_1938 9ec868f1aa324f51d97aa3dcbfacd729 482 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 11 180 1.7E-48 T 12-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 JDM601_2851 3e57880cee838099c92a0909ec0f45a4 373 Pfam PF04209 homogentisate 1,2-dioxygenase 109 296 1.2E-9 T 12-10-2018 IPR005708 Homogentisate 1,2-dioxygenase GO:0004411|GO:0006559|GO:0006570|GO:0055114 KEGG: 00350+1.13.11.5|KEGG: 00643+1.13.11.5|Reactome: R-HSA-71182 JDM601_2851 3e57880cee838099c92a0909ec0f45a4 373 SUPERFAMILY SSF51182 46 365 4.45E-69 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily JDM601_2851 3e57880cee838099c92a0909ec0f45a4 373 Gene3D G3DSA:2.60.120.10 73 166 3.7E-6 T 12-10-2018 IPR014710 RmlC-like jelly roll fold JDM601_3528 9a6ecce81560185065430bdc1e0b8868 714 Gene3D G3DSA:3.30.70.2390 587 667 9.1E-8 T 12-10-2018 JDM601_3528 9a6ecce81560185065430bdc1e0b8868 714 Pfam PF13399 LytR cell envelope-related transcriptional attenuator 587 671 8.5E-15 T 12-10-2018 IPR027381 Putative LytR/CpsA/Psr regulator, C-terminal domain JDM601_3528 9a6ecce81560185065430bdc1e0b8868 714 Pfam PF03816 Cell envelope-related transcriptional attenuator domain 280 453 1.2E-44 T 12-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain JDM601_3528 9a6ecce81560185065430bdc1e0b8868 714 Gene3D G3DSA:1.10.260.150 239 535 2.2E-62 T 12-10-2018 JDM601_3528 9a6ecce81560185065430bdc1e0b8868 714 TIGRFAM TIGR00350 lytR_cpsA_psr: cell envelope-related function transcriptional attenuator common domain 279 454 1.8E-56 T 12-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain JDM601_1585 83d49dbe371c2593f47f7b9df1be0b37 149 SMART SM00347 25 125 4.0E-14 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 JDM601_1585 83d49dbe371c2593f47f7b9df1be0b37 149 Gene3D G3DSA:1.10.10.10 7 145 2.2E-26 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JDM601_1585 83d49dbe371c2593f47f7b9df1be0b37 149 Pfam PF01047 MarR family 35 90 1.3E-14 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 JDM601_1585 83d49dbe371c2593f47f7b9df1be0b37 149 SUPERFAMILY SSF46785 13 140 2.97E-25 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JDM601_3922 1c5ee5575523a00ea1cfbe3a6213d5ae 1302 Gene3D G3DSA:3.30.300.30 391 488 7.2E-22 T 12-10-2018 JDM601_3922 1c5ee5575523a00ea1cfbe3a6213d5ae 1302 SUPERFAMILY SSF51161 881 1042 6.1E-19 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily JDM601_3922 1c5ee5575523a00ea1cfbe3a6213d5ae 1302 Gene3D G3DSA:2.160.10.10 1175 1288 2.2E-9 T 12-10-2018 JDM601_3922 1c5ee5575523a00ea1cfbe3a6213d5ae 1302 SUPERFAMILY SSF47336 501 569 4.19E-11 T 12-10-2018 IPR036736 ACP-like superfamily JDM601_3922 1c5ee5575523a00ea1cfbe3a6213d5ae 1302 Gene3D G3DSA:3.40.50.12780 10 390 1.6E-94 T 12-10-2018 JDM601_3922 1c5ee5575523a00ea1cfbe3a6213d5ae 1302 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 759 792 4.1E-4 T 12-10-2018 IPR001451 Hexapeptide repeat JDM601_3922 1c5ee5575523a00ea1cfbe3a6213d5ae 1302 Pfam PF00501 AMP-binding enzyme 23 395 8.0E-66 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 JDM601_3922 1c5ee5575523a00ea1cfbe3a6213d5ae 1302 SUPERFAMILY SSF51161 1163 1283 3.6E-17 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily JDM601_3922 1c5ee5575523a00ea1cfbe3a6213d5ae 1302 Gene3D G3DSA:1.10.1200.10 505 575 1.1E-13 T 12-10-2018 IPR036736 ACP-like superfamily JDM601_3922 1c5ee5575523a00ea1cfbe3a6213d5ae 1302 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 44 419 6.1E-98 T 12-10-2018 IPR010071 Amino acid adenylation domain JDM601_3922 1c5ee5575523a00ea1cfbe3a6213d5ae 1302 SUPERFAMILY SSF51161 700 811 5.82E-19 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily JDM601_3922 1c5ee5575523a00ea1cfbe3a6213d5ae 1302 SUPERFAMILY SSF56801 8 484 2.09E-111 T 12-10-2018 JDM601_3922 1c5ee5575523a00ea1cfbe3a6213d5ae 1302 Gene3D G3DSA:2.160.10.10 938 1054 2.0E-6 T 12-10-2018 JDM601_3922 1c5ee5575523a00ea1cfbe3a6213d5ae 1302 Gene3D G3DSA:2.160.10.10 703 814 1.7E-14 T 12-10-2018 JDM601_3922 1c5ee5575523a00ea1cfbe3a6213d5ae 1302 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 767 795 - T 12-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 JDM601_3922 1c5ee5575523a00ea1cfbe3a6213d5ae 1302 ProSitePatterns PS00455 Putative AMP-binding domain signature. 148 159 - T 12-10-2018 IPR020845 AMP-binding, conserved site JDM601_3922 1c5ee5575523a00ea1cfbe3a6213d5ae 1302 Pfam PF00550 Phosphopantetheine attachment site 506 568 1.1E-10 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain JDM601_3922 1c5ee5575523a00ea1cfbe3a6213d5ae 1302 TIGRFAM TIGR02353 NRPS_term_dom: non-ribosomal peptide synthetase terminal domain of unknown function 595 1280 2.1E-220 T 12-10-2018 IPR012728 Non-ribosomal peptide synthetase, C-terminal JDM601_3155 2c8da3fdee5db187049c02ae29176e04 372 PIRSF PIRSF038994 8 372 8.8E-102 T 12-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 JDM601_3155 2c8da3fdee5db187049c02ae29176e04 372 Gene3D G3DSA:3.20.20.140 50 342 1.1E-114 T 12-10-2018 JDM601_3155 2c8da3fdee5db187049c02ae29176e04 372 Gene3D G3DSA:2.30.40.10 9 368 1.1E-114 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 JDM601_3155 2c8da3fdee5db187049c02ae29176e04 372 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 43 368 3.2E-74 T 12-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 JDM601_3155 2c8da3fdee5db187049c02ae29176e04 372 Pfam PF01979 Amidohydrolase family 46 357 2.4E-25 T 12-10-2018 IPR006680 Amidohydrolase-related GO:0016787 JDM601_3155 2c8da3fdee5db187049c02ae29176e04 372 SUPERFAMILY SSF51556 50 340 3.01E-85 T 12-10-2018 IPR032466 Metal-dependent hydrolase JDM601_3155 2c8da3fdee5db187049c02ae29176e04 372 SUPERFAMILY SSF51338 3 371 6.48E-10 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 JDM601_3087 26d941b470f0a9182799aa01242c64dd 489 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 419 467 2.6E-12 T 12-10-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 JDM601_3087 26d941b470f0a9182799aa01242c64dd 489 Gene3D G3DSA:3.40.640.10 9 287 3.3E-73 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 JDM601_3087 26d941b470f0a9182799aa01242c64dd 489 Gene3D G3DSA:3.90.100.10 401 482 9.8E-16 T 12-10-2018 JDM601_3087 26d941b470f0a9182799aa01242c64dd 489 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 10 311 4.6E-49 T 12-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 JDM601_3087 26d941b470f0a9182799aa01242c64dd 489 SUPERFAMILY SSF55904 345 488 1.7E-29 T 12-10-2018 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily GO:0003824 JDM601_3087 26d941b470f0a9182799aa01242c64dd 489 SUPERFAMILY SSF53383 10 385 1.26E-70 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase JDM601_1014 3bb9f6839cb000cfa8e32244d6fd0d22 133 Pfam PF00581 Rhodanese-like domain 25 124 1.8E-6 T 12-10-2018 IPR001763 Rhodanese-like domain JDM601_1014 3bb9f6839cb000cfa8e32244d6fd0d22 133 Gene3D G3DSA:3.40.250.10 2 130 3.1E-21 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily JDM601_1014 3bb9f6839cb000cfa8e32244d6fd0d22 133 SMART SM00450 23 128 1.9E-8 T 12-10-2018 IPR001763 Rhodanese-like domain JDM601_1014 3bb9f6839cb000cfa8e32244d6fd0d22 133 SUPERFAMILY SSF52821 12 127 7.55E-17 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily JDM601_2284 fe72543caa54c948ccbfa65ddda33aa8 159 Gene3D G3DSA:3.40.50.960 1 158 5.1E-57 T 12-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 JDM601_2284 fe72543caa54c948ccbfa65ddda33aa8 159 SUPERFAMILY SSF52121 11 156 3.14E-50 T 12-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 JDM601_2284 fe72543caa54c948ccbfa65ddda33aa8 159 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 17 150 2.0E-47 T 12-10-2018 IPR002180 Lumazine/riboflavin synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 JDM601_2284 fe72543caa54c948ccbfa65ddda33aa8 159 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 17 149 5.2E-38 T 12-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 JDM601_2284 fe72543caa54c948ccbfa65ddda33aa8 159 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 12 155 26.508 T 12-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 JDM601_1543 aa45e40c3ed014b2663d6ac84942ab60 1472 Gene3D G3DSA:3.30.559.30 1209 1472 5.0E-34 T 12-10-2018 JDM601_1543 aa45e40c3ed014b2663d6ac84942ab60 1472 ProSitePatterns PS00012 Phosphopantetheine attachment site. 990 1005 - T 12-10-2018 IPR006162 Phosphopantetheine attachment site JDM601_1543 aa45e40c3ed014b2663d6ac84942ab60 1472 Gene3D G3DSA:3.40.50.12780 456 850 1.0E-116 T 12-10-2018 JDM601_1543 aa45e40c3ed014b2663d6ac84942ab60 1472 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 489 880 8.2E-109 T 12-10-2018 IPR010071 Amino acid adenylation domain JDM601_1543 aa45e40c3ed014b2663d6ac84942ab60 1472 Gene3D G3DSA:3.30.559.10 20 383 1.4E-108 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 JDM601_1543 aa45e40c3ed014b2663d6ac84942ab60 1472 Gene3D G3DSA:3.30.559.30 196 450 1.4E-108 T 12-10-2018 JDM601_1543 aa45e40c3ed014b2663d6ac84942ab60 1472 SUPERFAMILY SSF47336 957 1064 6.15E-12 T 12-10-2018 IPR036736 ACP-like superfamily JDM601_1543 aa45e40c3ed014b2663d6ac84942ab60 1472 Pfam PF00668 Condensation domain 1080 1349 7.8E-13 T 12-10-2018 IPR001242 Condensation domain JDM601_1543 aa45e40c3ed014b2663d6ac84942ab60 1472 Pfam PF00668 Condensation domain 15 449 1.1E-64 T 12-10-2018 IPR001242 Condensation domain JDM601_1543 aa45e40c3ed014b2663d6ac84942ab60 1472 SUPERFAMILY SSF52777 1225 1470 1.78E-11 T 12-10-2018 JDM601_1543 aa45e40c3ed014b2663d6ac84942ab60 1472 SUPERFAMILY SSF52777 13 209 2.78E-41 T 12-10-2018 JDM601_1543 aa45e40c3ed014b2663d6ac84942ab60 1472 SUPERFAMILY SSF56801 452 973 2.35E-131 T 12-10-2018 JDM601_1543 aa45e40c3ed014b2663d6ac84942ab60 1472 ProSitePatterns PS00455 Putative AMP-binding domain signature. 594 605 - T 12-10-2018 IPR020845 AMP-binding, conserved site JDM601_1543 aa45e40c3ed014b2663d6ac84942ab60 1472 Gene3D G3DSA:1.10.1200.10 952 1036 2.2E-11 T 12-10-2018 IPR036736 ACP-like superfamily JDM601_1543 aa45e40c3ed014b2663d6ac84942ab60 1472 Pfam PF00550 Phosphopantetheine attachment site 966 1029 1.1E-8 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain JDM601_1543 aa45e40c3ed014b2663d6ac84942ab60 1472 SUPERFAMILY SSF52777 196 434 1.67E-42 T 12-10-2018 JDM601_1543 aa45e40c3ed014b2663d6ac84942ab60 1472 Gene3D G3DSA:3.30.559.10 1037 1207 5.1E-25 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 JDM601_1543 aa45e40c3ed014b2663d6ac84942ab60 1472 Pfam PF13193 AMP-binding enzyme C-terminal domain 864 935 6.6E-10 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain JDM601_1543 aa45e40c3ed014b2663d6ac84942ab60 1472 SUPERFAMILY SSF52777 1051 1235 2.37E-22 T 12-10-2018 JDM601_1543 aa45e40c3ed014b2663d6ac84942ab60 1472 Pfam PF00501 AMP-binding enzyme 469 856 5.9E-88 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 JDM601_1543 aa45e40c3ed014b2663d6ac84942ab60 1472 Gene3D G3DSA:3.30.300.30 851 947 1.7E-25 T 12-10-2018 JDM601_3890 56d16eb1fec4f8ca3c90e74474348fd3 138 Hamap MF_00446 Aspartate 1-decarboxylase [panD]. 1 130 73.867 T 12-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 JDM601_3890 56d16eb1fec4f8ca3c90e74474348fd3 138 TIGRFAM TIGR00223 panD: aspartate 1-decarboxylase 1 116 5.9E-51 T 12-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 JDM601_3890 56d16eb1fec4f8ca3c90e74474348fd3 138 Pfam PF02261 Aspartate decarboxylase 1 113 4.5E-51 T 12-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 JDM601_3890 56d16eb1fec4f8ca3c90e74474348fd3 138 Gene3D G3DSA:2.40.40.20 1 121 9.8E-53 T 12-10-2018 JDM601_3890 56d16eb1fec4f8ca3c90e74474348fd3 138 SUPERFAMILY SSF50692 1 116 6.03E-49 T 12-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily JDM601_3890 56d16eb1fec4f8ca3c90e74474348fd3 138 PIRSF PIRSF006246 1 131 3.4E-52 T 12-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 JDM601_3890 56d16eb1fec4f8ca3c90e74474348fd3 138 ProDom PD009294 ASPARTATE 1-DECARBOXYLASE DECARBOXYLASE CHAIN LYASE ALPHA ALPHA- CONTAINS: PRECURSOR BETA 5 95 2.0E-36 T 12-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 JDM601_1363 5a0aaa9919afae7fdd981cbbc4563cd4 664 Pfam PF02384 N-6 DNA Methylase 155 468 5.1E-62 T 12-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 JDM601_1363 5a0aaa9919afae7fdd981cbbc4563cd4 664 Pfam PF12161 HsdM N-terminal domain 13 143 3.2E-20 T 12-10-2018 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain JDM601_1363 5a0aaa9919afae7fdd981cbbc4563cd4 664 Gene3D G3DSA:3.40.50.150 156 474 6.6E-94 T 12-10-2018 JDM601_1363 5a0aaa9919afae7fdd981cbbc4563cd4 664 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 178 194 6.1E-11 T 12-10-2018 JDM601_1363 5a0aaa9919afae7fdd981cbbc4563cd4 664 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 283 295 6.1E-11 T 12-10-2018 JDM601_1363 5a0aaa9919afae7fdd981cbbc4563cd4 664 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 211 225 6.1E-11 T 12-10-2018 JDM601_1363 5a0aaa9919afae7fdd981cbbc4563cd4 664 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 286 292 - T 12-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 JDM601_1363 5a0aaa9919afae7fdd981cbbc4563cd4 664 SUPERFAMILY SSF53335 10 504 1.39E-118 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JDM601_1619 a4205af24e5e40bf4372b9748fb53d3b 621 PRINTS PR01217 Proline rich extensin signature 345 362 5.8E-9 T 12-10-2018 JDM601_1619 a4205af24e5e40bf4372b9748fb53d3b 621 PRINTS PR01217 Proline rich extensin signature 327 343 5.8E-9 T 12-10-2018 JDM601_1619 a4205af24e5e40bf4372b9748fb53d3b 621 PRINTS PR01217 Proline rich extensin signature 365 390 5.8E-9 T 12-10-2018 JDM601_1619 a4205af24e5e40bf4372b9748fb53d3b 621 PRINTS PR01217 Proline rich extensin signature 305 326 5.8E-9 T 12-10-2018 JDM601_1619 a4205af24e5e40bf4372b9748fb53d3b 621 SUPERFAMILY SSF56112 24 367 7.01E-63 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily JDM601_1619 a4205af24e5e40bf4372b9748fb53d3b 621 Gene3D G3DSA:1.10.510.10 108 299 1.1E-41 T 12-10-2018 JDM601_1619 a4205af24e5e40bf4372b9748fb53d3b 621 Gene3D G3DSA:3.30.200.20 25 106 5.3E-23 T 12-10-2018 JDM601_1619 a4205af24e5e40bf4372b9748fb53d3b 621 Pfam PF00069 Protein kinase domain 29 276 1.1E-37 T 12-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 JDM601_1215 4b5b9bd018061c760eac72650bb0db8c 274 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 193 0.0032 T 12-10-2018 JDM601_1215 4b5b9bd018061c760eac72650bb0db8c 274 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 5.2E-10 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_1215 4b5b9bd018061c760eac72650bb0db8c 274 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 5.2E-10 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_1215 4b5b9bd018061c760eac72650bb0db8c 274 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 5.2E-10 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_1215 4b5b9bd018061c760eac72650bb0db8c 274 Gene3D G3DSA:3.40.50.720 1 266 1.4E-65 T 12-10-2018 JDM601_1215 4b5b9bd018061c760eac72650bb0db8c 274 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 JDM601_1215 4b5b9bd018061c760eac72650bb0db8c 274 SUPERFAMILY SSF51735 2 264 1.17E-63 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_1215 4b5b9bd018061c760eac72650bb0db8c 274 Pfam PF00106 short chain dehydrogenase 7 199 6.0E-50 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_1215 4b5b9bd018061c760eac72650bb0db8c 274 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 5.0E-26 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_1215 4b5b9bd018061c760eac72650bb0db8c 274 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 5.0E-26 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_1215 4b5b9bd018061c760eac72650bb0db8c 274 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 5.0E-26 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_1215 4b5b9bd018061c760eac72650bb0db8c 274 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 5.0E-26 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_1215 4b5b9bd018061c760eac72650bb0db8c 274 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 5.0E-26 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3018 94466cb3cdec54e565c28972731b8536 484 Pfam PF13399 LytR cell envelope-related transcriptional attenuator 355 437 3.3E-12 T 12-10-2018 IPR027381 Putative LytR/CpsA/Psr regulator, C-terminal domain JDM601_3018 94466cb3cdec54e565c28972731b8536 484 TIGRFAM TIGR00350 lytR_cpsA_psr: cell envelope-related function transcriptional attenuator common domain 83 252 1.2E-31 T 12-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain JDM601_3018 94466cb3cdec54e565c28972731b8536 484 Gene3D G3DSA:3.30.70.2390 351 433 5.7E-7 T 12-10-2018 JDM601_3018 94466cb3cdec54e565c28972731b8536 484 Gene3D G3DSA:1.10.260.150 41 343 6.9E-66 T 12-10-2018 JDM601_3018 94466cb3cdec54e565c28972731b8536 484 Pfam PF03816 Cell envelope-related transcriptional attenuator domain 83 252 3.9E-41 T 12-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain JDM601_4096 9e35b9832905f973d2d392f35a488d8a 131 SUPERFAMILY SSF88723 1 119 5.05E-10 T 12-10-2018 IPR029060 PIN-like domain superfamily JDM601_4096 9e35b9832905f973d2d392f35a488d8a 131 Pfam PF01850 PIN domain 27 120 1.7E-5 T 12-10-2018 IPR002716 PIN domain JDM601_4096 9e35b9832905f973d2d392f35a488d8a 131 Hamap MF_00265 tRNA(fMet)-specific endonuclease VapC [vapC]. 4 125 12.125 T 12-10-2018 IPR022907 VapC family GO:0004540 JDM601_4096 9e35b9832905f973d2d392f35a488d8a 131 Gene3D G3DSA:3.40.50.1010 1 130 7.2E-26 T 12-10-2018 JDM601_1737 d56d36cdedfd0b3e144f8a1598940477 664 Gene3D G3DSA:3.90.1310.30 112 297 1.6E-29 T 12-10-2018 JDM601_1737 d56d36cdedfd0b3e144f8a1598940477 664 Pfam PF03717 Penicillin-binding Protein dimerisation domain 117 279 1.6E-8 T 12-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 JDM601_1737 d56d36cdedfd0b3e144f8a1598940477 664 Pfam PF00905 Penicillin binding protein transpeptidase domain 324 639 7.2E-86 T 12-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 JDM601_1737 d56d36cdedfd0b3e144f8a1598940477 664 Gene3D G3DSA:3.30.450.330 299 645 2.8E-103 T 12-10-2018 JDM601_1737 d56d36cdedfd0b3e144f8a1598940477 664 SUPERFAMILY SSF56601 298 652 1.18E-94 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like JDM601_1737 d56d36cdedfd0b3e144f8a1598940477 664 SUPERFAMILY SSF56519 116 297 1.14E-29 T 12-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 JDM601_1737 d56d36cdedfd0b3e144f8a1598940477 664 Gene3D G3DSA:3.40.710.10 360 559 2.8E-103 T 12-10-2018 JDM601_2358 0f7d38c7b33aeca4f4f446a5873bbc6c 98 SUPERFAMILY SSF140453 4 97 3.66E-19 T 12-10-2018 IPR036689 ESAT-6-like superfamily JDM601_2358 0f7d38c7b33aeca4f4f446a5873bbc6c 98 TIGRFAM TIGR03930 WXG100_ESAT6: WXG100 family type VII secretion target 5 93 5.7E-19 T 12-10-2018 IPR010310 Type VII secretion system ESAT-6-like JDM601_2358 0f7d38c7b33aeca4f4f446a5873bbc6c 98 Gene3D G3DSA:1.10.287.1060 1 98 2.6E-55 T 12-10-2018 JDM601_2358 0f7d38c7b33aeca4f4f446a5873bbc6c 98 Pfam PF06013 Proteins of 100 residues with WXG 5 89 2.6E-19 T 12-10-2018 IPR010310 Type VII secretion system ESAT-6-like JDM601_3975 2ca32d2af0ea4fc913ac1a72f1ee8193 263 Gene3D G3DSA:1.10.10.10 117 212 3.0E-27 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JDM601_3975 2ca32d2af0ea4fc913ac1a72f1ee8193 263 SUPERFAMILY SSF46785 111 207 2.22E-27 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JDM601_3975 2ca32d2af0ea4fc913ac1a72f1ee8193 263 Pfam PF03551 Transcriptional regulator PadR-like family 128 197 4.2E-21 T 12-10-2018 IPR005149 Transcription regulator PadR, N-terminal JDM601_1159 737657a91b6e6430d4cd768cbb14482d 308 TIGRFAM TIGR03445 mycothiol_MshB: N-acetyl-1-D-myo-inositol-2-amino-2-deoxy-alpha-D-glucopyranoside deacetylase 9 296 8.0E-130 T 12-10-2018 IPR017810 Mycothiol biosynthesis protein, MshB GO:0035595 JDM601_1159 737657a91b6e6430d4cd768cbb14482d 308 Pfam PF02585 GlcNAc-PI de-N-acetylase 9 158 7.1E-26 T 12-10-2018 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related Reactome: R-HSA-162710 JDM601_1159 737657a91b6e6430d4cd768cbb14482d 308 Hamap MF_01696 1D-myo-inositol 2-acetamido-2-deoxy-alpha-D-glucopyranoside deacetylase [mshB]. 8 296 40.317 T 12-10-2018 IPR017810 Mycothiol biosynthesis protein, MshB GO:0035595 JDM601_1159 737657a91b6e6430d4cd768cbb14482d 308 Gene3D G3DSA:3.40.50.10320 3 303 3.8E-114 T 12-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 JDM601_1159 737657a91b6e6430d4cd768cbb14482d 308 SUPERFAMILY SSF102588 6 296 3.53E-71 T 12-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 JDM601_4246 41615659a87ff4f98e73bb1ac69453b7 213 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 92 1.7E-9 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_4246 41615659a87ff4f98e73bb1ac69453b7 213 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 32 43 1.7E-9 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_4246 41615659a87ff4f98e73bb1ac69453b7 213 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 104 123 1.7E-9 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_4246 41615659a87ff4f98e73bb1ac69453b7 213 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 11 210 2.2E-48 T 12-10-2018 JDM601_4246 41615659a87ff4f98e73bb1ac69453b7 213 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 91 119 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 JDM601_4246 41615659a87ff4f98e73bb1ac69453b7 213 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 104 123 9.4E-27 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_4246 41615659a87ff4f98e73bb1ac69453b7 213 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 32 43 9.4E-27 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_4246 41615659a87ff4f98e73bb1ac69453b7 213 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 193 9.4E-27 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_4246 41615659a87ff4f98e73bb1ac69453b7 213 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 142 9.4E-27 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_4246 41615659a87ff4f98e73bb1ac69453b7 213 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 94 9.4E-27 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_4246 41615659a87ff4f98e73bb1ac69453b7 213 SUPERFAMILY SSF51735 4 210 7.02E-57 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_4246 41615659a87ff4f98e73bb1ac69453b7 213 Gene3D G3DSA:3.40.50.720 1 211 2.5E-61 T 12-10-2018 JDM601_3891 f00d9250351571e5d1475da2079b8d90 316 SUPERFAMILY SSF52374 16 294 5.91E-101 T 12-10-2018 JDM601_3891 f00d9250351571e5d1475da2079b8d90 316 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 27 292 7.4E-82 T 12-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 JDM601_3891 f00d9250351571e5d1475da2079b8d90 316 Hamap MF_00158 Pantothenate synthetase [panC]. 19 292 38.642 T 12-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 JDM601_3891 f00d9250351571e5d1475da2079b8d90 316 Gene3D G3DSA:3.30.1300.10 193 306 1.6E-36 T 12-10-2018 JDM601_3891 f00d9250351571e5d1475da2079b8d90 316 Gene3D G3DSA:3.40.50.620 8 192 1.8E-80 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JDM601_3891 f00d9250351571e5d1475da2079b8d90 316 Pfam PF02569 Pantoate-beta-alanine ligase 22 290 6.2E-93 T 12-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 JDM601_1573 ae93499234c5e3fd2ec25d5889b13aa7 420 SMART SM00471 68 231 1.3E-12 T 12-10-2018 IPR003607 HD/PDEase domain JDM601_1573 ae93499234c5e3fd2ec25d5889b13aa7 420 Pfam PF13286 Phosphohydrolase-associated domain 329 417 3.0E-15 T 12-10-2018 IPR026875 Phosphohydrolase-associated domain JDM601_1573 ae93499234c5e3fd2ec25d5889b13aa7 420 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 34 410 1.6E-69 T 12-10-2018 IPR006261 dNTP triphosphohydrolase GO:0016793 JDM601_1573 ae93499234c5e3fd2ec25d5889b13aa7 420 SUPERFAMILY SSF109604 34 247 1.28E-55 T 12-10-2018 JDM601_1573 ae93499234c5e3fd2ec25d5889b13aa7 420 Gene3D G3DSA:1.10.3210.10 11 419 1.2E-82 T 12-10-2018 JDM601_1573 ae93499234c5e3fd2ec25d5889b13aa7 420 Pfam PF01966 HD domain 72 221 3.8E-19 T 12-10-2018 IPR006674 HD domain JDM601_0625 d8197fb8b1686a7b296bd711252b4783 1033 Gene3D G3DSA:3.30.870.10 128 283 6.3E-25 T 12-10-2018 JDM601_0625 d8197fb8b1686a7b296bd711252b4783 1033 SMART SM00487 308 493 8.1E-7 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain JDM601_0625 d8197fb8b1686a7b296bd711252b4783 1033 SUPERFAMILY SSF56024 130 270 2.77E-7 T 12-10-2018 JDM601_0625 d8197fb8b1686a7b296bd711252b4783 1033 SMART SM00490 565 646 3.4E-13 T 12-10-2018 IPR001650 Helicase, C-terminal JDM601_0625 d8197fb8b1686a7b296bd711252b4783 1033 Pfam PF11907 Domain of unknown function (DUF3427) 876 1026 1.7E-24 T 12-10-2018 IPR021835 Protein of unknown function DUF3427 JDM601_0625 d8197fb8b1686a7b296bd711252b4783 1033 Pfam PF00271 Helicase conserved C-terminal domain 552 644 4.3E-12 T 12-10-2018 IPR001650 Helicase, C-terminal JDM601_0625 d8197fb8b1686a7b296bd711252b4783 1033 Gene3D G3DSA:3.40.50.300 297 481 1.4E-39 T 12-10-2018 JDM601_0625 d8197fb8b1686a7b296bd711252b4783 1033 Pfam PF04851 Type III restriction enzyme, res subunit 311 466 2.1E-28 T 12-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 JDM601_0625 d8197fb8b1686a7b296bd711252b4783 1033 Gene3D G3DSA:3.40.50.300 521 677 9.2E-33 T 12-10-2018 JDM601_0625 d8197fb8b1686a7b296bd711252b4783 1033 SUPERFAMILY SSF52540 365 666 5.6E-39 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_0625 d8197fb8b1686a7b296bd711252b4783 1033 Pfam PF13091 PLD-like domain 141 268 7.0E-10 T 12-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 JDM601_1830 7d45fd93dbb46b71724f95672bdc910f 313 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 6 313 5.0E-101 T 12-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 JDM601_1830 7d45fd93dbb46b71724f95672bdc910f 313 SUPERFAMILY SSF51735 3 143 3.68E-30 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_1830 7d45fd93dbb46b71724f95672bdc910f 313 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 1 307 31.774 T 12-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 JDM601_1830 7d45fd93dbb46b71724f95672bdc910f 313 SMART SM00859 1 111 2.1E-14 T 12-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 JDM601_1830 7d45fd93dbb46b71724f95672bdc910f 313 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 4 110 1.3E-12 T 12-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 JDM601_1830 7d45fd93dbb46b71724f95672bdc910f 313 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 128 284 2.2E-23 T 12-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 JDM601_1830 7d45fd93dbb46b71724f95672bdc910f 313 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 114 130 - T 12-10-2018 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 JDM601_1830 7d45fd93dbb46b71724f95672bdc910f 313 Gene3D G3DSA:3.40.50.720 3 299 4.9E-107 T 12-10-2018 JDM601_1830 7d45fd93dbb46b71724f95672bdc910f 313 Gene3D G3DSA:3.30.360.10 123 286 4.9E-107 T 12-10-2018 JDM601_1830 7d45fd93dbb46b71724f95672bdc910f 313 SUPERFAMILY SSF55347 119 281 1.64E-44 T 12-10-2018 JDM601_4218 d881b855fc1628a1db98e37e0ce35d91 424 Pfam PF04909 Amidohydrolase 75 371 6.3E-31 T 12-10-2018 IPR006680 Amidohydrolase-related GO:0016787 JDM601_4218 d881b855fc1628a1db98e37e0ce35d91 424 Gene3D G3DSA:3.20.20.140 8 369 1.2E-76 T 12-10-2018 JDM601_4218 d881b855fc1628a1db98e37e0ce35d91 424 SUPERFAMILY SSF51556 11 372 2.26E-60 T 12-10-2018 IPR032466 Metal-dependent hydrolase JDM601_0950 81acbfa55f729cd0c2abb5941ed1fd4b 201 Pfam PF00440 Bacterial regulatory proteins, tetR family 29 74 1.0E-11 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_0950 81acbfa55f729cd0c2abb5941ed1fd4b 201 SUPERFAMILY SSF46689 16 86 2.14E-15 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JDM601_0950 81acbfa55f729cd0c2abb5941ed1fd4b 201 Gene3D G3DSA:1.10.357.10 16 201 2.0E-24 T 12-10-2018 JDM601_0950 81acbfa55f729cd0c2abb5941ed1fd4b 201 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 28 41 2.2E-6 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_0950 81acbfa55f729cd0c2abb5941ed1fd4b 201 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 49 72 2.2E-6 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_0409 7e09250f19aeed52fb1c37afc7935599 279 Gene3D G3DSA:3.40.50.720 1 279 7.7E-84 T 12-10-2018 JDM601_0409 7e09250f19aeed52fb1c37afc7935599 279 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 275 3.0E-49 T 12-10-2018 JDM601_0409 7e09250f19aeed52fb1c37afc7935599 279 SUPERFAMILY SSF51735 6 277 1.85E-67 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_0409 7e09250f19aeed52fb1c37afc7935599 279 TIGRFAM TIGR03971 SDR_subfam_1: SDR family mycofactocin-dependent oxidoreductase 5 278 1.3E-118 T 12-10-2018 IPR023985 Mycofactocin-dependent oxidoreductase JDM601_0409 7e09250f19aeed52fb1c37afc7935599 279 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 240 260 4.9E-29 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0409 7e09250f19aeed52fb1c37afc7935599 279 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 96 107 4.9E-29 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0409 7e09250f19aeed52fb1c37afc7935599 279 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 4.9E-29 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0409 7e09250f19aeed52fb1c37afc7935599 279 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 192 209 4.9E-29 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0409 7e09250f19aeed52fb1c37afc7935599 279 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 190 4.9E-29 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0409 7e09250f19aeed52fb1c37afc7935599 279 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 145 161 4.9E-29 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0409 7e09250f19aeed52fb1c37afc7935599 279 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 96 107 9.4E-7 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0409 7e09250f19aeed52fb1c37afc7935599 279 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 159 9.4E-7 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0409 7e09250f19aeed52fb1c37afc7935599 279 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 171 190 9.4E-7 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2553 201a63ec78743764463b07688d255d78 544 Pfam PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain 334 533 3.8E-25 T 12-10-2018 IPR013736 Xaa-Pro dipeptidyl-peptidase, C-terminal GO:0008239 JDM601_2553 201a63ec78743764463b07688d255d78 544 SUPERFAMILY SSF53474 32 328 2.43E-41 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_2553 201a63ec78743764463b07688d255d78 544 TIGRFAM TIGR00976 /NonD: hydrolase CocE/NonD family protein 40 531 1.1E-86 T 12-10-2018 IPR005674 CocE/Serine esterase GO:0016787 JDM601_2553 201a63ec78743764463b07688d255d78 544 SMART SM00939 317 539 7.1E-54 T 12-10-2018 IPR013736 Xaa-Pro dipeptidyl-peptidase, C-terminal GO:0008239 JDM601_2553 201a63ec78743764463b07688d255d78 544 Gene3D G3DSA:3.40.50.1820 39 343 3.1E-79 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_2553 201a63ec78743764463b07688d255d78 544 Pfam PF02129 X-Pro dipeptidyl-peptidase (S15 family) 43 303 3.0E-60 T 12-10-2018 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain GO:0016787 JDM601_2553 201a63ec78743764463b07688d255d78 544 Gene3D G3DSA:2.60.120.260 346 542 6.0E-47 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily JDM601_2553 201a63ec78743764463b07688d255d78 544 SUPERFAMILY SSF49785 344 542 1.87E-42 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily JDM601_2553 201a63ec78743764463b07688d255d78 544 Gene3D G3DSA:1.10.3020.10 166 253 3.1E-79 T 12-10-2018 JDM601_3273 9df5607fcc8408eed2eb211db57721ab 1186 SUPERFAMILY SSF52540 688 911 7.97E-22 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_3273 9df5607fcc8408eed2eb211db57721ab 1186 Gene3D G3DSA:3.40.50.300 692 935 2.7E-58 T 12-10-2018 JDM601_3273 9df5607fcc8408eed2eb211db57721ab 1186 SUPERFAMILY SSF52540 943 1117 3.99E-10 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_3273 9df5607fcc8408eed2eb211db57721ab 1186 SUPERFAMILY SSF52540 383 606 2.53E-29 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_3273 9df5607fcc8408eed2eb211db57721ab 1186 SMART SM00382 414 594 0.2 T 12-10-2018 IPR003593 AAA+ ATPase domain JDM601_3273 9df5607fcc8408eed2eb211db57721ab 1186 SMART SM00382 979 1161 0.19 T 12-10-2018 IPR003593 AAA+ ATPase domain JDM601_3273 9df5607fcc8408eed2eb211db57721ab 1186 SMART SM00382 735 893 5.5E-4 T 12-10-2018 IPR003593 AAA+ ATPase domain JDM601_3273 9df5607fcc8408eed2eb211db57721ab 1186 Pfam PF01580 FtsK/SpoIIIE family 387 520 4.0E-27 T 12-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 JDM601_3273 9df5607fcc8408eed2eb211db57721ab 1186 Pfam PF01580 FtsK/SpoIIIE family 971 1057 4.7E-7 T 12-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 JDM601_3273 9df5607fcc8408eed2eb211db57721ab 1186 Pfam PF01580 FtsK/SpoIIIE family 702 928 1.2E-48 T 12-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 JDM601_3273 9df5607fcc8408eed2eb211db57721ab 1186 Gene3D G3DSA:3.40.50.300 361 691 6.9E-100 T 12-10-2018 JDM601_3273 9df5607fcc8408eed2eb211db57721ab 1186 TIGRFAM TIGR03925 T7SS_EccC_b: type VII secretion protein EccCb 669 1183 1.1E-197 T 12-10-2018 IPR023837 EccCb-like, Actinobacteria JDM601_3273 9df5607fcc8408eed2eb211db57721ab 1186 Gene3D G3DSA:3.40.50.300 962 1185 2.4E-53 T 12-10-2018 JDM601_0995 c4ec03a1212987a66ee8fa601537ddab 394 Pfam PF12484 Polymorphic PE/PPE proteins C terminal 308 390 2.5E-15 T 12-10-2018 IPR022171 PPE family, C-terminal JDM601_0995 c4ec03a1212987a66ee8fa601537ddab 394 SUPERFAMILY SSF140459 2 170 4.97E-61 T 12-10-2018 JDM601_0995 c4ec03a1212987a66ee8fa601537ddab 394 Gene3D G3DSA:1.20.1260.20 1 174 8.8E-66 T 12-10-2018 IPR038332 PPE superfamily JDM601_0995 c4ec03a1212987a66ee8fa601537ddab 394 Pfam PF00823 PPE family 5 161 5.7E-61 T 12-10-2018 IPR000030 PPE family JDM601_1197 7e860dc4b54354b4d4b19b8543cf0dc2 477 Gene3D G3DSA:2.40.10.10 272 386 1.3E-38 T 12-10-2018 JDM601_1197 7e860dc4b54354b4d4b19b8543cf0dc2 477 Pfam PF13365 Trypsin-like peptidase domain 204 351 2.2E-34 T 12-10-2018 JDM601_1197 7e860dc4b54354b4d4b19b8543cf0dc2 477 PRINTS PR00834 HtrA/DegQ protease family signature 281 305 3.3E-45 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 JDM601_1197 7e860dc4b54354b4d4b19b8543cf0dc2 477 PRINTS PR00834 HtrA/DegQ protease family signature 213 225 3.3E-45 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 JDM601_1197 7e860dc4b54354b4d4b19b8543cf0dc2 477 PRINTS PR00834 HtrA/DegQ protease family signature 240 260 3.3E-45 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 JDM601_1197 7e860dc4b54354b4d4b19b8543cf0dc2 477 PRINTS PR00834 HtrA/DegQ protease family signature 344 361 3.3E-45 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 JDM601_1197 7e860dc4b54354b4d4b19b8543cf0dc2 477 PRINTS PR00834 HtrA/DegQ protease family signature 422 434 3.3E-45 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 JDM601_1197 7e860dc4b54354b4d4b19b8543cf0dc2 477 PRINTS PR00834 HtrA/DegQ protease family signature 322 339 3.3E-45 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 JDM601_1197 7e860dc4b54354b4d4b19b8543cf0dc2 477 SUPERFAMILY SSF50494 173 398 8.39E-55 T 12-10-2018 IPR009003 Peptidase S1, PA clan JDM601_1197 7e860dc4b54354b4d4b19b8543cf0dc2 477 Gene3D G3DSA:2.30.42.10 387 476 2.8E-16 T 12-10-2018 JDM601_1197 7e860dc4b54354b4d4b19b8543cf0dc2 477 SMART SM00228 390 464 1.9E-6 T 12-10-2018 IPR001478 PDZ domain GO:0005515 JDM601_1197 7e860dc4b54354b4d4b19b8543cf0dc2 477 Pfam PF13180 PDZ domain 390 472 9.1E-13 T 12-10-2018 IPR001478 PDZ domain GO:0005515 JDM601_1197 7e860dc4b54354b4d4b19b8543cf0dc2 477 Gene3D G3DSA:2.40.10.10 172 270 2.2E-28 T 12-10-2018 JDM601_1197 7e860dc4b54354b4d4b19b8543cf0dc2 477 SUPERFAMILY SSF50156 372 473 1.31E-17 T 12-10-2018 IPR036034 PDZ superfamily GO:0005515 JDM601_3534 13a7b132b4f948e4da5c2e10027fffc1 366 Gene3D G3DSA:3.40.190.10 128 307 1.9E-105 T 12-10-2018 JDM601_3534 13a7b132b4f948e4da5c2e10027fffc1 366 Gene3D G3DSA:3.40.190.10 48 352 1.9E-105 T 12-10-2018 JDM601_3534 13a7b132b4f948e4da5c2e10027fffc1 366 PIRSF PIRSF002756 4 366 3.6E-104 T 12-10-2018 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 JDM601_3534 13a7b132b4f948e4da5c2e10027fffc1 366 TIGRFAM TIGR00975 3a0107s03: phosphate ABC transporter, phosphate-binding protein PstS 47 365 2.0E-99 T 12-10-2018 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 JDM601_3534 13a7b132b4f948e4da5c2e10027fffc1 366 Pfam PF12849 PBP superfamily domain 43 331 8.6E-48 T 12-10-2018 IPR024370 PBP domain JDM601_3534 13a7b132b4f948e4da5c2e10027fffc1 366 SUPERFAMILY SSF53850 45 365 3.88E-79 T 12-10-2018 JDM601_2509 432637623a67babdf8fda26f97bc6cb8 160 Pfam PF00186 Dihydrofolate reductase 4 160 5.1E-42 T 12-10-2018 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0046654|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 JDM601_2509 432637623a67babdf8fda26f97bc6cb8 160 ProSitePatterns PS00075 Dihydrofolate reductase (DHFR) domain signature. 15 37 - T 12-10-2018 IPR017925 Dihydrofolate reductase conserved site GO:0004146|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-1474151|Reactome: R-HSA-196757|Reactome: R-HSA-539107 JDM601_2509 432637623a67babdf8fda26f97bc6cb8 160 SUPERFAMILY SSF53597 4 160 1.04E-45 T 12-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 JDM601_2509 432637623a67babdf8fda26f97bc6cb8 160 PIRSF PIRSF000194 1 160 1.6E-45 T 12-10-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0046654|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614 JDM601_2509 432637623a67babdf8fda26f97bc6cb8 160 PRINTS PR00070 Dihydrofolate reductase signature 15 25 1.9E-14 T 12-10-2018 JDM601_2509 432637623a67babdf8fda26f97bc6cb8 160 PRINTS PR00070 Dihydrofolate reductase signature 42 53 1.9E-14 T 12-10-2018 JDM601_2509 432637623a67babdf8fda26f97bc6cb8 160 PRINTS PR00070 Dihydrofolate reductase signature 92 106 1.9E-14 T 12-10-2018 JDM601_2509 432637623a67babdf8fda26f97bc6cb8 160 PRINTS PR00070 Dihydrofolate reductase signature 29 37 1.9E-14 T 12-10-2018 JDM601_2509 432637623a67babdf8fda26f97bc6cb8 160 Gene3D G3DSA:3.40.430.10 2 160 5.9E-51 T 12-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 JDM601_2214 a309edfab92d167e6c296201e29bbd9a 1595 Pfam PF00550 Phosphopantetheine attachment site 1509 1559 4.0E-9 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain JDM601_2214 a309edfab92d167e6c296201e29bbd9a 1595 Pfam PF00550 Phosphopantetheine attachment site 13 78 1.0E-9 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain JDM601_2214 a309edfab92d167e6c296201e29bbd9a 1595 Pfam PF00698 Acyl transferase domain 632 946 2.7E-80 T 12-10-2018 IPR014043 Acyl transferase JDM601_2214 a309edfab92d167e6c296201e29bbd9a 1595 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 261 277 - T 12-10-2018 IPR018201 Beta-ketoacyl synthase, active site JDM601_2214 a309edfab92d167e6c296201e29bbd9a 1595 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 1214 1390 2.9E-14 T 12-10-2018 JDM601_2214 a309edfab92d167e6c296201e29bbd9a 1595 SUPERFAMILY SSF53901 97 522 1.92E-101 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 JDM601_2214 a309edfab92d167e6c296201e29bbd9a 1595 SUPERFAMILY SSF55048 755 817 9.29E-8 T 12-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding JDM601_2214 a309edfab92d167e6c296201e29bbd9a 1595 Gene3D G3DSA:3.40.47.10 95 545 1.8E-191 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 JDM601_2214 a309edfab92d167e6c296201e29bbd9a 1595 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 476 582 2.6E-20 T 12-10-2018 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 JDM601_2214 a309edfab92d167e6c296201e29bbd9a 1595 SUPERFAMILY SSF51735 999 1198 8.37E-32 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_2214 a309edfab92d167e6c296201e29bbd9a 1595 SUPERFAMILY SSF47336 1485 1568 9.95E-13 T 12-10-2018 IPR036736 ACP-like superfamily JDM601_2214 a309edfab92d167e6c296201e29bbd9a 1595 SUPERFAMILY SSF52151 631 920 1.54E-55 T 12-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase JDM601_2214 a309edfab92d167e6c296201e29bbd9a 1595 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 99 348 1.9E-91 T 12-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal JDM601_2214 a309edfab92d167e6c296201e29bbd9a 1595 Gene3D G3DSA:1.10.1200.10 1474 1565 2.8E-19 T 12-10-2018 IPR036736 ACP-like superfamily JDM601_2214 a309edfab92d167e6c296201e29bbd9a 1595 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 356 473 3.0E-41 T 12-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal JDM601_2214 a309edfab92d167e6c296201e29bbd9a 1595 Pfam PF08659 KR domain 1215 1388 1.5E-42 T 12-10-2018 IPR013968 Polyketide synthase, ketoreductase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 JDM601_2214 a309edfab92d167e6c296201e29bbd9a 1595 Gene3D G3DSA:1.10.1200.10 2 81 6.2E-18 T 12-10-2018 IPR036736 ACP-like superfamily JDM601_2214 a309edfab92d167e6c296201e29bbd9a 1595 SMART SM00825 Beta-ketoacyl synthase 101 526 4.7E-214 T 12-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain JDM601_2214 a309edfab92d167e6c296201e29bbd9a 1595 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 634 929 3.1E-86 T 12-10-2018 IPR020801 Polyketide synthase, acyl transferase domain JDM601_2214 a309edfab92d167e6c296201e29bbd9a 1595 SUPERFAMILY SSF47336 6 113 7.59E-15 T 12-10-2018 IPR036736 ACP-like superfamily JDM601_2214 a309edfab92d167e6c296201e29bbd9a 1595 Gene3D G3DSA:3.40.366.20 546 945 8.6E-116 T 12-10-2018 JDM601_2214 a309edfab92d167e6c296201e29bbd9a 1595 Gene3D G3DSA:3.30.70.250 752 818 8.6E-116 T 12-10-2018 JDM601_2214 a309edfab92d167e6c296201e29bbd9a 1595 SMART SM00823 Phosphopantetheine attachment site 1491 1563 1.4E-17 T 12-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 JDM601_2214 a309edfab92d167e6c296201e29bbd9a 1595 SMART SM00823 Phosphopantetheine attachment site 11 82 5.8E-4 T 12-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 JDM601_2214 a309edfab92d167e6c296201e29bbd9a 1595 Gene3D G3DSA:3.40.50.720 1001 1467 3.3E-92 T 12-10-2018 JDM601_2214 a309edfab92d167e6c296201e29bbd9a 1595 SMART SM01294 1500 1559 3.2E-4 T 12-10-2018 JDM601_2214 a309edfab92d167e6c296201e29bbd9a 1595 SUPERFAMILY SSF51735 1213 1440 1.9E-34 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_3919 087d9646f253c6af1c029bfeda86e308 1505 Gene3D G3DSA:1.20.1110.10 1237 1340 1.5E-69 T 12-10-2018 JDM601_3919 087d9646f253c6af1c029bfeda86e308 1505 SUPERFAMILY SSF56784 926 1295 4.32E-40 T 12-10-2018 IPR036412 HAD-like superfamily JDM601_3919 087d9646f253c6af1c029bfeda86e308 1505 SUPERFAMILY SSF81653 730 824 2.88E-22 T 12-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 JDM601_3919 087d9646f253c6af1c029bfeda86e308 1505 Gene3D G3DSA:1.20.1110.10 656 924 4.6E-61 T 12-10-2018 JDM601_3919 087d9646f253c6af1c029bfeda86e308 1505 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 1191 1210 1.2E-26 T 12-10-2018 JDM601_3919 087d9646f253c6af1c029bfeda86e308 1505 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 1215 1227 1.2E-26 T 12-10-2018 JDM601_3919 087d9646f253c6af1c029bfeda86e308 1505 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 768 782 1.2E-26 T 12-10-2018 JDM601_3919 087d9646f253c6af1c029bfeda86e308 1505 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 1111 1121 1.2E-26 T 12-10-2018 JDM601_3919 087d9646f253c6af1c029bfeda86e308 1505 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 1089 1100 1.2E-26 T 12-10-2018 JDM601_3919 087d9646f253c6af1c029bfeda86e308 1505 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 928 942 1.2E-26 T 12-10-2018 JDM601_3919 087d9646f253c6af1c029bfeda86e308 1505 Pfam PF00122 E1-E2 ATPase 729 907 3.9E-37 T 12-10-2018 JDM601_3919 087d9646f253c6af1c029bfeda86e308 1505 Gene3D G3DSA:2.70.150.10 654 831 4.6E-61 T 12-10-2018 JDM601_3919 087d9646f253c6af1c029bfeda86e308 1505 Pfam PF00702 haloacid dehalogenase-like hydrolase 924 1204 1.3E-20 T 12-10-2018 JDM601_3919 087d9646f253c6af1c029bfeda86e308 1505 Gene3D G3DSA:3.40.1110.10 1014 1096 1.5E-69 T 12-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 JDM601_3919 087d9646f253c6af1c029bfeda86e308 1505 Gene3D G3DSA:3.40.50.1000 925 937 4.6E-61 T 12-10-2018 IPR023214 HAD superfamily JDM601_3919 087d9646f253c6af1c029bfeda86e308 1505 Gene3D G3DSA:3.40.50.1000 1097 1236 1.5E-69 T 12-10-2018 IPR023214 HAD superfamily JDM601_3919 087d9646f253c6af1c029bfeda86e308 1505 Pfam PF00689 Cation transporting ATPase, C-terminus 1276 1423 1.6E-14 T 12-10-2018 IPR006068 Cation-transporting P-type ATPase, C-terminal Reactome: R-HSA-936837 JDM601_3919 087d9646f253c6af1c029bfeda86e308 1505 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 1223 1248 5.5E-11 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 JDM601_3919 087d9646f253c6af1c029bfeda86e308 1505 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 1037 1055 5.5E-11 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 JDM601_3919 087d9646f253c6af1c029bfeda86e308 1505 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 1191 1207 5.5E-11 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 JDM601_3919 087d9646f253c6af1c029bfeda86e308 1505 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 688 960 2.7E-28 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 JDM601_3919 087d9646f253c6af1c029bfeda86e308 1505 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 1160 1272 1.6E-21 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 JDM601_3919 087d9646f253c6af1c029bfeda86e308 1505 SUPERFAMILY SSF81665 612 1421 1.09E-46 T 12-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 JDM601_0563 6b11a80e7de44bf677d1e06756652279 507 Gene3D G3DSA:1.10.510.10 89 255 1.0E-36 T 12-10-2018 JDM601_0563 6b11a80e7de44bf677d1e06756652279 507 Pfam PF00069 Protein kinase domain 11 217 1.1E-38 T 12-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 JDM601_0563 6b11a80e7de44bf677d1e06756652279 507 SMART SM00220 11 253 2.2E-44 T 12-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 JDM601_0563 6b11a80e7de44bf677d1e06756652279 507 SUPERFAMILY SSF56112 10 331 9.48E-64 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily JDM601_0563 6b11a80e7de44bf677d1e06756652279 507 Gene3D G3DSA:3.30.200.20 1 88 2.6E-35 T 12-10-2018 JDM601_0563 6b11a80e7de44bf677d1e06756652279 507 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 131 143 - T 12-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 JDM601_0959 f3229112d138999fd414f697e652eb65 278 Gene3D G3DSA:3.40.1010.10 1 114 4.8E-30 T 12-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 JDM601_0959 f3229112d138999fd414f697e652eb65 278 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 5 225 32.529 T 12-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 JDM601_0959 f3229112d138999fd414f697e652eb65 278 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 85 96 - T 12-10-2018 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 JDM601_0959 f3229112d138999fd414f697e652eb65 278 Gene3D G3DSA:3.30.950.10 115 231 3.0E-39 T 12-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 JDM601_0959 f3229112d138999fd414f697e652eb65 278 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 11 208 4.2E-29 T 12-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 JDM601_0959 f3229112d138999fd414f697e652eb65 278 PIRSF PIRSF005917 1 278 1.6E-88 T 12-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 JDM601_0959 f3229112d138999fd414f697e652eb65 278 SUPERFAMILY SSF53790 4 223 5.89E-69 T 12-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 JDM601_0959 f3229112d138999fd414f697e652eb65 278 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 9 274 7.9E-60 T 12-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 JDM601_2009 0da9098c6d2efa3f09a4a0f6d01f0171 605 SUPERFAMILY SSF56801 31 601 4.45E-86 T 12-10-2018 JDM601_2009 0da9098c6d2efa3f09a4a0f6d01f0171 605 Gene3D G3DSA:3.40.50.12780 18 494 2.8E-148 T 12-10-2018 JDM601_2009 0da9098c6d2efa3f09a4a0f6d01f0171 605 Gene3D G3DSA:3.30.300.30 495 605 1.6E-31 T 12-10-2018 JDM601_2009 0da9098c6d2efa3f09a4a0f6d01f0171 605 Pfam PF00501 AMP-binding enzyme 40 499 1.8E-66 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 JDM601_3829 89d5f21270c49ac3ae9635022d12c7c7 722 SUPERFAMILY SSF56645 386 582 1.83E-52 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 JDM601_3829 89d5f21270c49ac3ae9635022d12c7c7 722 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 381 458 1.2E-8 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 JDM601_3829 89d5f21270c49ac3ae9635022d12c7c7 722 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 10 119 6.0E-11 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 JDM601_3829 89d5f21270c49ac3ae9635022d12c7c7 722 SUPERFAMILY SSF56645 8 205 9.16E-22 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 JDM601_3829 89d5f21270c49ac3ae9635022d12c7c7 722 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 463 557 1.4E-16 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 JDM601_3829 89d5f21270c49ac3ae9635022d12c7c7 722 Gene3D G3DSA:1.20.140.10 213 349 5.8E-33 T 12-10-2018 JDM601_3829 89d5f21270c49ac3ae9635022d12c7c7 722 Gene3D G3DSA:1.10.540.10 359 458 1.4E-10 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 JDM601_3829 89d5f21270c49ac3ae9635022d12c7c7 722 Gene3D G3DSA:1.20.140.10 574 719 3.4E-25 T 12-10-2018 JDM601_3829 89d5f21270c49ac3ae9635022d12c7c7 722 SUPERFAMILY SSF47203 213 339 4.35E-31 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 JDM601_3829 89d5f21270c49ac3ae9635022d12c7c7 722 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 215 331 6.8E-22 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 JDM601_3829 89d5f21270c49ac3ae9635022d12c7c7 722 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 569 713 5.1E-19 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 JDM601_3829 89d5f21270c49ac3ae9635022d12c7c7 722 SUPERFAMILY SSF47203 569 715 3.7E-17 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 JDM601_3829 89d5f21270c49ac3ae9635022d12c7c7 722 Gene3D G3DSA:1.10.540.10 6 122 5.0E-19 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 JDM601_3829 89d5f21270c49ac3ae9635022d12c7c7 722 Gene3D G3DSA:2.40.110.10 463 573 1.5E-31 T 12-10-2018 JDM601_3196 191eeeaf1f07023bc0e39abd1ebf96fb 879 Pfam PF00498 FHA domain 19 82 3.7E-14 T 12-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 JDM601_3196 191eeeaf1f07023bc0e39abd1ebf96fb 879 Pfam PF00498 FHA domain 248 310 3.5E-14 T 12-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 JDM601_3196 191eeeaf1f07023bc0e39abd1ebf96fb 879 Pfam PF01061 ABC-2 type transporter 614 822 5.0E-16 T 12-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 JDM601_3196 191eeeaf1f07023bc0e39abd1ebf96fb 879 SUPERFAMILY SSF49879 193 322 6.7E-23 T 12-10-2018 IPR008984 SMAD/FHA domain superfamily GO:0005515 JDM601_3196 191eeeaf1f07023bc0e39abd1ebf96fb 879 SUPERFAMILY SSF49879 16 110 9.18E-21 T 12-10-2018 IPR008984 SMAD/FHA domain superfamily GO:0005515 JDM601_3196 191eeeaf1f07023bc0e39abd1ebf96fb 879 Pfam PF00005 ABC transporter 350 497 1.1E-32 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JDM601_3196 191eeeaf1f07023bc0e39abd1ebf96fb 879 SUPERFAMILY SSF52540 326 560 1.23E-54 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_3196 191eeeaf1f07023bc0e39abd1ebf96fb 879 Gene3D G3DSA:2.60.200.20 2 97 2.8E-17 T 12-10-2018 JDM601_3196 191eeeaf1f07023bc0e39abd1ebf96fb 879 Gene3D G3DSA:2.60.200.20 209 320 1.9E-19 T 12-10-2018 JDM601_3196 191eeeaf1f07023bc0e39abd1ebf96fb 879 SMART SM00240 18 68 3.6E-14 T 12-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 JDM601_3196 191eeeaf1f07023bc0e39abd1ebf96fb 879 SMART SM00240 246 296 4.8E-12 T 12-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 JDM601_3196 191eeeaf1f07023bc0e39abd1ebf96fb 879 SMART SM00382 359 543 1.2E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain JDM601_3196 191eeeaf1f07023bc0e39abd1ebf96fb 879 Gene3D G3DSA:3.40.50.300 322 574 9.9E-65 T 12-10-2018 JDM601_3196 191eeeaf1f07023bc0e39abd1ebf96fb 879 ProSitePatterns PS00211 ABC transporters family signature. 469 483 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JDM601_3832 271fd9dc2e07392e015a76e353be5eb5 821 Pfam PF01370 NAD dependent epimerase/dehydratase family 11 97 2.8E-7 T 12-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 JDM601_3832 271fd9dc2e07392e015a76e353be5eb5 821 Gene3D G3DSA:3.50.30.10 707 810 1.0E-27 T 12-10-2018 JDM601_3832 271fd9dc2e07392e015a76e353be5eb5 821 SUPERFAMILY SSF52009 709 808 1.31E-24 T 12-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 JDM601_3832 271fd9dc2e07392e015a76e353be5eb5 821 Gene3D G3DSA:3.40.50.720 2 236 1.4E-25 T 12-10-2018 JDM601_3832 271fd9dc2e07392e015a76e353be5eb5 821 SUPERFAMILY SSF51735 7 229 6.68E-26 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_3832 271fd9dc2e07392e015a76e353be5eb5 821 Pfam PF00391 PEP-utilising enzyme, mobile domain 733 804 3.7E-20 T 12-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 JDM601_2429 6df9818412632370b4bce73161e8314d 147 SUPERFAMILY SSF54631 9 143 3.64E-15 T 12-10-2018 JDM601_2429 6df9818412632370b4bce73161e8314d 147 Pfam PF00571 CBS domain 7 57 9.4E-4 T 12-10-2018 IPR000644 CBS domain JDM601_2429 6df9818412632370b4bce73161e8314d 147 Pfam PF00571 CBS domain 97 144 7.0E-5 T 12-10-2018 IPR000644 CBS domain JDM601_2429 6df9818412632370b4bce73161e8314d 147 SMART SM00116 9 57 2.7 T 12-10-2018 IPR000644 CBS domain JDM601_2429 6df9818412632370b4bce73161e8314d 147 SMART SM00116 98 145 0.15 T 12-10-2018 IPR000644 CBS domain JDM601_2429 6df9818412632370b4bce73161e8314d 147 Gene3D G3DSA:3.10.580.10 1 147 1.7E-59 T 12-10-2018 JDM601_1138 054dea16bbeffdd0551d682bab65e776 273 Pfam PF04072 Leucine carboxyl methyltransferase 16 174 3.6E-14 T 12-10-2018 IPR007213 Methyltransferase Ppm1/Ppm2/Tcmp GO:0008168|GO:0032259 JDM601_1138 054dea16bbeffdd0551d682bab65e776 273 SUPERFAMILY SSF53335 12 248 9.97E-47 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JDM601_1138 054dea16bbeffdd0551d682bab65e776 273 PIRSF PIRSF028177 1 272 1.4E-66 T 12-10-2018 IPR016874 Tetracenomycin polyketide synthesis O-methyltransferase TcmP GO:0017000|GO:1901106 JDM601_1138 054dea16bbeffdd0551d682bab65e776 273 Gene3D G3DSA:3.40.50.150 3 224 5.9E-38 T 12-10-2018 JDM601_2452 0d99103ff09ed1cc6df3c723d998c1d2 321 Gene3D G3DSA:1.10.10.10 238 321 4.9E-29 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JDM601_2452 0d99103ff09ed1cc6df3c723d998c1d2 321 Pfam PF04545 Sigma-70, region 4 256 309 2.7E-19 T 12-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 JDM601_2452 0d99103ff09ed1cc6df3c723d998c1d2 321 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 281 307 - T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 JDM601_2452 0d99103ff09ed1cc6df3c723d998c1d2 321 Gene3D G3DSA:1.10.10.10 161 236 6.8E-28 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JDM601_2452 0d99103ff09ed1cc6df3c723d998c1d2 321 Pfam PF00140 Sigma-70 factor, region 1.2 23 56 1.2E-12 T 12-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 JDM601_2452 0d99103ff09ed1cc6df3c723d998c1d2 321 SUPERFAMILY SSF88659 218 318 8.29E-27 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like JDM601_2452 0d99103ff09ed1cc6df3c723d998c1d2 321 PRINTS PR00046 Major sigma-70 factor signature 260 272 6.4E-28 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 JDM601_2452 0d99103ff09ed1cc6df3c723d998c1d2 321 PRINTS PR00046 Major sigma-70 factor signature 296 307 6.4E-28 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 JDM601_2452 0d99103ff09ed1cc6df3c723d998c1d2 321 PRINTS PR00046 Major sigma-70 factor signature 112 125 6.4E-28 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 JDM601_2452 0d99103ff09ed1cc6df3c723d998c1d2 321 PRINTS PR00046 Major sigma-70 factor signature 281 296 6.4E-28 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 JDM601_2452 0d99103ff09ed1cc6df3c723d998c1d2 321 PRINTS PR00046 Major sigma-70 factor signature 136 144 6.4E-28 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 JDM601_2452 0d99103ff09ed1cc6df3c723d998c1d2 321 Pfam PF04542 Sigma-70 region 2 88 157 1.3E-21 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 JDM601_2452 0d99103ff09ed1cc6df3c723d998c1d2 321 SUPERFAMILY SSF88659 161 234 4.36E-19 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like JDM601_2452 0d99103ff09ed1cc6df3c723d998c1d2 321 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 112 125 - T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 JDM601_2452 0d99103ff09ed1cc6df3c723d998c1d2 321 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 84 309 2.5E-37 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 JDM601_2452 0d99103ff09ed1cc6df3c723d998c1d2 321 Pfam PF04539 Sigma-70 region 3 167 243 4.0E-25 T 12-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 JDM601_2452 0d99103ff09ed1cc6df3c723d998c1d2 321 Gene3D G3DSA:1.10.601.10 21 58 3.6E-6 T 12-10-2018 JDM601_2452 0d99103ff09ed1cc6df3c723d998c1d2 321 Gene3D G3DSA:1.10.601.10 59 160 5.7E-49 T 12-10-2018 JDM601_2452 0d99103ff09ed1cc6df3c723d998c1d2 321 SUPERFAMILY SSF88946 23 158 2.88E-50 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 JDM601_1097 ff4ab2e9fb26d0bc9a9688c1956b3820 365 TIGRFAM TIGR00996 Mtu_fam_mce: virulence factor Mce family protein 8 279 7.5E-42 T 12-10-2018 IPR005693 Virulence factor Mce protein JDM601_1097 ff4ab2e9fb26d0bc9a9688c1956b3820 365 Pfam PF11887 Cholesterol uptake porter CUP1 of Mce4, putative 156 279 1.1E-7 T 12-10-2018 IPR024516 Mammalian cell entry, C-terminal JDM601_1097 ff4ab2e9fb26d0bc9a9688c1956b3820 365 Pfam PF02470 MlaD protein 36 107 3.4E-9 T 12-10-2018 IPR003399 Mce/MlaD JDM601_1916 4651451a6626d8e8cd685ebd389bbe80 784 Gene3D G3DSA:1.10.3060.10 594 746 7.3E-25 T 12-10-2018 JDM601_1916 4651451a6626d8e8cd685ebd389bbe80 784 PRINTS PR00906 SecA protein signature 77 101 1.1E-40 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 JDM601_1916 4651451a6626d8e8cd685ebd389bbe80 784 PRINTS PR00906 SecA protein signature 372 389 1.1E-40 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 JDM601_1916 4651451a6626d8e8cd685ebd389bbe80 784 PRINTS PR00906 SecA protein signature 335 357 1.1E-40 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 JDM601_1916 4651451a6626d8e8cd685ebd389bbe80 784 PRINTS PR00906 SecA protein signature 409 422 1.1E-40 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 JDM601_1916 4651451a6626d8e8cd685ebd389bbe80 784 PRINTS PR00906 SecA protein signature 115 129 1.1E-40 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 JDM601_1916 4651451a6626d8e8cd685ebd389bbe80 784 PRINTS PR00906 SecA protein signature 184 204 1.1E-40 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 JDM601_1916 4651451a6626d8e8cd685ebd389bbe80 784 SUPERFAMILY SSF52540 20 566 1.11E-50 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_1916 4651451a6626d8e8cd685ebd389bbe80 784 SMART SM00957 23 398 2.0E-146 T 12-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 JDM601_1916 4651451a6626d8e8cd685ebd389bbe80 784 ProSitePatterns PS01312 SecA family signature. 496 511 - T 12-10-2018 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 JDM601_1916 4651451a6626d8e8cd685ebd389bbe80 784 Gene3D G3DSA:3.40.50.300 51 411 3.1E-116 T 12-10-2018 JDM601_1916 4651451a6626d8e8cd685ebd389bbe80 784 Hamap MF_01382 Protein translocase subunit SecA [secA]. 22 742 15.299 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 JDM601_1916 4651451a6626d8e8cd685ebd389bbe80 784 SUPERFAMILY SSF52540 413 572 4.68E-44 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_1916 4651451a6626d8e8cd685ebd389bbe80 784 SUPERFAMILY SSF81886 593 745 9.55E-29 T 12-10-2018 IPR036266 SecA, Wing/Scaffold superfamily JDM601_1916 4651451a6626d8e8cd685ebd389bbe80 784 Pfam PF07517 SecA DEAD-like domain 25 396 9.9E-83 T 12-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 JDM601_1916 4651451a6626d8e8cd685ebd389bbe80 784 Pfam PF01043 SecA preprotein cross-linking domain 253 354 2.9E-21 T 12-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 JDM601_1916 4651451a6626d8e8cd685ebd389bbe80 784 SMART SM00958 241 354 2.9E-28 T 12-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 JDM601_1916 4651451a6626d8e8cd685ebd389bbe80 784 SUPERFAMILY SSF81767 250 362 5.49E-30 T 12-10-2018 IPR036670 SecA, preprotein cross-linking domain superfamily GO:0016020|GO:0017038 JDM601_1916 4651451a6626d8e8cd685ebd389bbe80 784 Gene3D G3DSA:3.90.1440.10 243 364 3.1E-116 T 12-10-2018 JDM601_1916 4651451a6626d8e8cd685ebd389bbe80 784 Gene3D G3DSA:3.40.50.300 413 516 1.0E-37 T 12-10-2018 JDM601_1916 4651451a6626d8e8cd685ebd389bbe80 784 Gene3D G3DSA:3.40.50.300 517 577 1.5E-19 T 12-10-2018 JDM601_1916 4651451a6626d8e8cd685ebd389bbe80 784 TIGRFAM TIGR04221 SecA2_Mycobac: accessory Sec system translocase SecA2 20 784 0.0 T 12-10-2018 IPR026389 Protein translocase subunit SecA, Actinobacteria-type JDM601_1916 4651451a6626d8e8cd685ebd389bbe80 784 Pfam PF07516 SecA Wing and Scaffold domain 643 730 1.0E-12 T 12-10-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 JDM601_4116 6747cc5d95ec1359b4e036bb9699d023 524 Gene3D G3DSA:3.90.226.10 263 522 9.1E-79 T 12-10-2018 JDM601_4116 6747cc5d95ec1359b4e036bb9699d023 524 SUPERFAMILY SSF52096 230 518 2.81E-74 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily JDM601_4116 6747cc5d95ec1359b4e036bb9699d023 524 SUPERFAMILY SSF52096 16 255 4.78E-65 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily JDM601_4116 6747cc5d95ec1359b4e036bb9699d023 524 Gene3D G3DSA:3.90.226.10 10 262 1.7E-76 T 12-10-2018 JDM601_4116 6747cc5d95ec1359b4e036bb9699d023 524 Pfam PF01039 Carboxyl transferase domain 41 521 9.1E-139 T 12-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 JDM601_3547 d8bd45d9f47f1784b1704c1912227f4f 225 Gene3D G3DSA:2.40.128.20 27 225 8.5E-79 T 12-10-2018 IPR012674 Calycin JDM601_3547 d8bd45d9f47f1784b1704c1912227f4f 225 Pfam PF08768 Domain of unknown function (DUF1794) 64 222 1.2E-43 T 12-10-2018 IPR014878 Domain of unknown function DUF1794 JDM601_3547 d8bd45d9f47f1784b1704c1912227f4f 225 Hamap MF_01297 UPF0678 fatty acid-binding protein-like protein . 56 224 29.453 T 12-10-2018 IPR022939 Uncharacterised protein family UPF0678 JDM601_3547 d8bd45d9f47f1784b1704c1912227f4f 225 SUPERFAMILY SSF50814 59 222 2.93E-35 T 12-10-2018 IPR012674 Calycin JDM601_3696 2655ff8b6ab111b7778e363b9cbbe628 159 Gene3D G3DSA:2.30.110.10 9 159 4.3E-42 T 12-10-2018 IPR012349 FMN-binding split barrel GO:0048037 JDM601_3696 2655ff8b6ab111b7778e363b9cbbe628 159 SUPERFAMILY SSF50475 53 152 2.16E-8 T 12-10-2018 JDM601_3696 2655ff8b6ab111b7778e363b9cbbe628 159 TIGRFAM TIGR00026 hi_GC_TIGR00026: deazaflavin-dependent oxidoreductase, nitroreductase family 48 158 2.5E-32 T 12-10-2018 IPR004378 F420H(2)-dependent quinone reductase GO:0016491|GO:0055114 JDM601_3696 2655ff8b6ab111b7778e363b9cbbe628 159 Pfam PF04075 F420H(2)-dependent quinone reductase 23 159 7.0E-40 T 12-10-2018 IPR004378 F420H(2)-dependent quinone reductase GO:0016491|GO:0055114 JDM601_1345 5477dd527690f42122c495ae89e00383 423 Pfam PF12587 Protein of unknown function (DUF3761) 384 417 9.8E-15 T 12-10-2018 IPR022236 Protein of unknown function DUF3761 JDM601_1345 5477dd527690f42122c495ae89e00383 423 SUPERFAMILY SSF56112 11 349 5.4E-62 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily JDM601_1345 5477dd527690f42122c495ae89e00383 423 Gene3D G3DSA:3.30.200.20 2 91 1.4E-32 T 12-10-2018 JDM601_1345 5477dd527690f42122c495ae89e00383 423 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 133 145 - T 12-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 JDM601_1345 5477dd527690f42122c495ae89e00383 423 Gene3D G3DSA:1.10.510.10 97 284 2.2E-35 T 12-10-2018 JDM601_1345 5477dd527690f42122c495ae89e00383 423 SMART SM00220 12 275 1.1E-45 T 12-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 JDM601_1345 5477dd527690f42122c495ae89e00383 423 Pfam PF00069 Protein kinase domain 12 223 1.6E-36 T 12-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 JDM601_1154 5ba21d1f3f29f574d30180850c6ee2e2 128 SUPERFAMILY SSF55298 7 127 2.67E-28 T 12-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 JDM601_1154 5ba21d1f3f29f574d30180850c6ee2e2 128 Gene3D G3DSA:3.30.1330.40 2 127 9.3E-31 T 12-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 JDM601_1154 5ba21d1f3f29f574d30180850c6ee2e2 128 Pfam PF01042 Endoribonuclease L-PSP 17 126 8.7E-19 T 12-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 JDM601_1610 5477e11bccb9494d30ac6c097de212b5 256 SUPERFAMILY SSF46955 4 76 3.94E-14 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily JDM601_1610 5477e11bccb9494d30ac6c097de212b5 256 Pfam PF13411 MerR HTH family regulatory protein 4 69 1.8E-16 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 JDM601_1610 5477e11bccb9494d30ac6c097de212b5 256 Gene3D G3DSA:1.10.1660.10 5 168 3.2E-19 T 12-10-2018 JDM601_1610 5477e11bccb9494d30ac6c097de212b5 256 SMART SM00422 4 72 3.3E-8 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 JDM601_2146 49e783b5b092b75e24df66baae45f76f 377 Pfam PF00155 Aminotransferase class I and II 34 356 4.6E-49 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 JDM601_2146 49e783b5b092b75e24df66baae45f76f 377 Gene3D G3DSA:3.40.640.10 56 279 4.5E-130 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 JDM601_2146 49e783b5b092b75e24df66baae45f76f 377 SUPERFAMILY SSF53383 33 365 9.58E-71 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase JDM601_2146 49e783b5b092b75e24df66baae45f76f 377 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 14 366 53.532 T 12-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 JDM601_2146 49e783b5b092b75e24df66baae45f76f 377 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 16 363 1.1E-100 T 12-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 JDM601_2146 49e783b5b092b75e24df66baae45f76f 377 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 229 238 - T 12-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 JDM601_2146 49e783b5b092b75e24df66baae45f76f 377 Gene3D G3DSA:3.90.1150.10 19 361 4.5E-130 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 JDM601_3445 d63e88db8937e14445c0a0bed9fb8da7 458 Gene3D G3DSA:2.102.10.10 50 173 7.3E-49 T 12-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 JDM601_3445 d63e88db8937e14445c0a0bed9fb8da7 458 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 65 80 6.0E-21 T 12-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 JDM601_3445 d63e88db8937e14445c0a0bed9fb8da7 458 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 86 106 6.0E-21 T 12-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 JDM601_3445 d63e88db8937e14445c0a0bed9fb8da7 458 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 108 128 6.0E-21 T 12-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 JDM601_3445 d63e88db8937e14445c0a0bed9fb8da7 458 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 35 60 6.0E-21 T 12-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 JDM601_3445 d63e88db8937e14445c0a0bed9fb8da7 458 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 149 175 6.0E-21 T 12-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 JDM601_3445 d63e88db8937e14445c0a0bed9fb8da7 458 SUPERFAMILY SSF55961 166 445 1.88E-28 T 12-10-2018 JDM601_3445 d63e88db8937e14445c0a0bed9fb8da7 458 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 187 446 1.9E-22 T 12-10-2018 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0044237|GO:0051537|GO:0055114 JDM601_3445 d63e88db8937e14445c0a0bed9fb8da7 458 SUPERFAMILY SSF50022 22 164 1.3E-38 T 12-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 JDM601_3445 d63e88db8937e14445c0a0bed9fb8da7 458 Gene3D G3DSA:3.90.380.10 28 220 7.3E-49 T 12-10-2018 JDM601_3445 d63e88db8937e14445c0a0bed9fb8da7 458 Pfam PF00355 Rieske [2Fe-2S] domain 50 129 1.9E-13 T 12-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 JDM601_4003 499706ccfa248d81e5bf3e4dcb35b604 203 SMART SM00278 11 30 0.0059 T 12-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 JDM601_4003 499706ccfa248d81e5bf3e4dcb35b604 203 ProSitePatterns PS01300 RecR protein signature. 56 77 - T 12-10-2018 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 JDM601_4003 499706ccfa248d81e5bf3e4dcb35b604 203 Pfam PF02132 RecR protein 39 77 6.7E-13 T 12-10-2018 IPR023628 Recombination protein RecR, C4-type zinc finger JDM601_4003 499706ccfa248d81e5bf3e4dcb35b604 203 SUPERFAMILY SSF111304 3 202 7.72E-68 T 12-10-2018 IPR023627 Recombination protein RecR JDM601_4003 499706ccfa248d81e5bf3e4dcb35b604 203 Gene3D G3DSA:3.40.1360.10 76 202 1.1E-42 T 12-10-2018 JDM601_4003 499706ccfa248d81e5bf3e4dcb35b604 203 SMART SM00493 79 168 1.6E-15 T 12-10-2018 IPR006171 TOPRIM domain JDM601_4003 499706ccfa248d81e5bf3e4dcb35b604 203 TIGRFAM TIGR00615 recR: recombination protein RecR 2 200 3.1E-80 T 12-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 JDM601_4003 499706ccfa248d81e5bf3e4dcb35b604 203 Pfam PF13662 Toprim domain 80 175 1.1E-23 T 12-10-2018 IPR006171 TOPRIM domain JDM601_4003 499706ccfa248d81e5bf3e4dcb35b604 203 Hamap MF_00017 Recombination protein RecR [recR]. 1 202 98.492 T 12-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 JDM601_4003 499706ccfa248d81e5bf3e4dcb35b604 203 Gene3D G3DSA:1.10.8.420 4 51 3.1E-18 T 12-10-2018 JDM601_1280 d91d9b797d4db055c70c7d2dd183bc1d 617 SUPERFAMILY SSF50465 315 418 5.76E-29 T 12-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal JDM601_1280 d91d9b797d4db055c70c7d2dd183bc1d 617 SUPERFAMILY SSF50447 223 311 3.74E-18 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily JDM601_1280 d91d9b797d4db055c70c7d2dd183bc1d 617 Hamap MF_00065 Adenylyl-sulfate kinase [cysC]. 444 617 35.846 T 12-10-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 JDM601_1280 d91d9b797d4db055c70c7d2dd183bc1d 617 Hamap MF_00062 Sulfate adenylyltransferase subunit 1 [cysN]. 1 446 47.678 T 12-10-2018 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 JDM601_1280 d91d9b797d4db055c70c7d2dd183bc1d 617 Pfam PF00009 Elongation factor Tu GTP binding domain 7 191 1.0E-39 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JDM601_1280 d91d9b797d4db055c70c7d2dd183bc1d 617 Gene3D G3DSA:3.40.50.300 2 217 2.1E-65 T 12-10-2018 JDM601_1280 d91d9b797d4db055c70c7d2dd183bc1d 617 Gene3D G3DSA:3.40.50.300 427 617 1.1E-63 T 12-10-2018 JDM601_1280 d91d9b797d4db055c70c7d2dd183bc1d 617 SUPERFAMILY SSF52540 443 614 2.13E-34 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_1280 d91d9b797d4db055c70c7d2dd183bc1d 617 Gene3D G3DSA:2.40.30.10 312 418 3.8E-33 T 12-10-2018 JDM601_1280 d91d9b797d4db055c70c7d2dd183bc1d 617 SUPERFAMILY SSF52540 6 213 4.82E-55 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_1280 d91d9b797d4db055c70c7d2dd183bc1d 617 PRINTS PR00315 GTP-binding elongation factor signature 68 76 4.9E-12 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JDM601_1280 d91d9b797d4db055c70c7d2dd183bc1d 617 PRINTS PR00315 GTP-binding elongation factor signature 88 98 4.9E-12 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JDM601_1280 d91d9b797d4db055c70c7d2dd183bc1d 617 PRINTS PR00315 GTP-binding elongation factor signature 141 150 4.9E-12 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JDM601_1280 d91d9b797d4db055c70c7d2dd183bc1d 617 PRINTS PR00315 GTP-binding elongation factor signature 9 22 4.9E-12 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JDM601_1280 d91d9b797d4db055c70c7d2dd183bc1d 617 PRINTS PR00315 GTP-binding elongation factor signature 104 115 4.9E-12 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JDM601_1280 d91d9b797d4db055c70c7d2dd183bc1d 617 TIGRFAM TIGR00455 apsK: adenylyl-sulfate kinase 443 610 2.1E-62 T 12-10-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 JDM601_1280 d91d9b797d4db055c70c7d2dd183bc1d 617 TIGRFAM TIGR02034 CysN: sulfate adenylyltransferase, large subunit 8 417 1.8E-172 T 12-10-2018 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 JDM601_1280 d91d9b797d4db055c70c7d2dd183bc1d 617 Gene3D G3DSA:2.40.30.10 218 311 1.3E-22 T 12-10-2018 JDM601_1280 d91d9b797d4db055c70c7d2dd183bc1d 617 Pfam PF01583 Adenylylsulphate kinase 445 598 3.0E-66 T 12-10-2018 JDM601_1280 d91d9b797d4db055c70c7d2dd183bc1d 617 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 61 76 - T 12-10-2018 IPR031157 Tr-type G domain, conserved site JDM601_1087 0dce36f6f6c946eafebf8926636b7383 765 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 434 756 4.3E-151 T 12-10-2018 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 JDM601_1087 0dce36f6f6c946eafebf8926636b7383 765 Pfam PF08267 Cobalamin-independent synthase, N-terminal domain 13 319 3.2E-109 T 12-10-2018 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal GO:0003871|GO:0008270|GO:0008652 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 JDM601_1087 0dce36f6f6c946eafebf8926636b7383 765 Hamap MF_00172 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [metE]. 11 761 34.346 T 12-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 JDM601_1087 0dce36f6f6c946eafebf8926636b7383 765 TIGRFAM TIGR01371 met_syn_B12ind: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase 16 760 0.0 T 12-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 JDM601_1087 0dce36f6f6c946eafebf8926636b7383 765 SUPERFAMILY SSF51726 13 400 6.41E-94 T 12-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 JDM601_1087 0dce36f6f6c946eafebf8926636b7383 765 Gene3D G3DSA:3.20.20.210 15 527 0.0 T 12-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 JDM601_1087 0dce36f6f6c946eafebf8926636b7383 765 Gene3D G3DSA:3.20.20.210 395 759 0.0 T 12-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 JDM601_1087 0dce36f6f6c946eafebf8926636b7383 765 SUPERFAMILY SSF51726 417 758 6.15E-112 T 12-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 JDM601_1087 0dce36f6f6c946eafebf8926636b7383 765 PIRSF PIRSF000382 10 764 0.0 T 12-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 JDM601_0318 5367e8e90bc2c2dbe07f2c72ac5a8a82 291 Gene3D G3DSA:2.60.120.200 52 291 1.3E-67 T 12-10-2018 JDM601_0318 5367e8e90bc2c2dbe07f2c72ac5a8a82 291 SUPERFAMILY SSF49899 44 290 4.3E-41 T 12-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily JDM601_0318 5367e8e90bc2c2dbe07f2c72ac5a8a82 291 Pfam PF00722 Glycosyl hydrolases family 16 99 227 2.3E-14 T 12-10-2018 IPR000757 Glycoside hydrolase family 16 GO:0004553|GO:0005975 JDM601_2233 93fbbceaa2a4abb36f10a44943e814d4 335 Pfam PF13519 von Willebrand factor type A domain 99 212 1.7E-18 T 12-10-2018 IPR002035 von Willebrand factor, type A JDM601_2233 93fbbceaa2a4abb36f10a44943e814d4 335 SMART SM00327 96 298 3.6E-25 T 12-10-2018 IPR002035 von Willebrand factor, type A JDM601_2233 93fbbceaa2a4abb36f10a44943e814d4 335 Gene3D G3DSA:3.40.50.410 99 296 2.8E-40 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily JDM601_2233 93fbbceaa2a4abb36f10a44943e814d4 335 SUPERFAMILY SSF53300 94 297 2.23E-29 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily JDM601_2233 93fbbceaa2a4abb36f10a44943e814d4 335 Hamap MF_01340 UPF0353 protein . 9 335 54.37 T 12-10-2018 IPR022933 Uncharacterised protein family UPF0353 JDM601_2233 93fbbceaa2a4abb36f10a44943e814d4 335 Pfam PF07584 Aerotolerance regulator N-terminal 13 86 2.9E-6 T 12-10-2018 IPR024163 Aerotolerance regulator, N-terminal JDM601_1522 2ce945df502ed708729fddc95b3a706f 392 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 25 350 8.7E-82 T 12-10-2018 IPR004559 Oxygen-independent coproporphyrinogen III oxidase-like GO:0004109|GO:0005737|GO:0006779|GO:0055114 JDM601_1522 2ce945df502ed708729fddc95b3a706f 392 SMART SM00729 22 245 5.2E-57 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 JDM601_1522 2ce945df502ed708729fddc95b3a706f 392 Pfam PF04055 Radical SAM superfamily 27 199 6.7E-20 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 JDM601_1522 2ce945df502ed708729fddc95b3a706f 392 SUPERFAMILY SSF102114 19 391 3.79E-111 T 12-10-2018 JDM601_1522 2ce945df502ed708729fddc95b3a706f 392 Gene3D G3DSA:3.80.30.20 5 320 2.3E-90 T 12-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe JDM601_1522 2ce945df502ed708729fddc95b3a706f 392 Pfam PF06969 HemN C-terminal domain 324 381 5.1E-8 T 12-10-2018 IPR010723 HemN, C-terminal JDM601_2483 2a86b71a8c798589811deb4c9d5a0740 713 TIGRFAM TIGR01443 intein_Cterm: intein C-terminal splicing region 549 570 7.1E-7 T 12-10-2018 IPR030934 Intein C-terminal splicing region JDM601_2483 2a86b71a8c798589811deb4c9d5a0740 713 SUPERFAMILY SSF52540 558 633 6.49E-9 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_2483 2a86b71a8c798589811deb4c9d5a0740 713 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 6 209 6.2E-110 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 JDM601_2483 2a86b71a8c798589811deb4c9d5a0740 713 SUPERFAMILY SSF55608 311 509 2.13E-38 T 12-10-2018 IPR027434 Homing endonuclease JDM601_2483 2a86b71a8c798589811deb4c9d5a0740 713 Pfam PF00154 recA bacterial DNA recombination protein 564 634 4.2E-29 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 JDM601_2483 2a86b71a8c798589811deb4c9d5a0740 713 Pfam PF00154 recA bacterial DNA recombination protein 9 207 2.6E-105 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 JDM601_2483 2a86b71a8c798589811deb4c9d5a0740 713 Gene3D G3DSA:3.30.250.10 634 713 3.7E-31 T 12-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal JDM601_2483 2a86b71a8c798589811deb4c9d5a0740 713 SMART SM00382 59 214 3.9E-6 T 12-10-2018 IPR003593 AAA+ ATPase domain JDM601_2483 2a86b71a8c798589811deb4c9d5a0740 713 Hamap MF_00268 Protein RecA [recA]. 7 695 42.93 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 JDM601_2483 2a86b71a8c798589811deb4c9d5a0740 713 Gene3D G3DSA:3.10.28.10 403 518 3.4E-15 T 12-10-2018 IPR027434 Homing endonuclease JDM601_2483 2a86b71a8c798589811deb4c9d5a0740 713 SUPERFAMILY SSF54752 634 692 3.79E-19 T 12-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal JDM601_2483 2a86b71a8c798589811deb4c9d5a0740 713 SUPERFAMILY SSF52540 6 207 2.25E-51 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_2483 2a86b71a8c798589811deb4c9d5a0740 713 Gene3D G3DSA:3.40.50.300 557 633 4.7E-15 T 12-10-2018 JDM601_2483 2a86b71a8c798589811deb4c9d5a0740 713 ProSitePatterns PS00321 recA signature. 579 587 - T 12-10-2018 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 JDM601_2483 2a86b71a8c798589811deb4c9d5a0740 713 PRINTS PR00142 RecA protein signature 576 604 1.1E-82 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 JDM601_2483 2a86b71a8c798589811deb4c9d5a0740 713 PRINTS PR00142 RecA protein signature 663 680 1.1E-82 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 JDM601_2483 2a86b71a8c798589811deb4c9d5a0740 713 PRINTS PR00142 RecA protein signature 95 124 1.1E-82 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 JDM601_2483 2a86b71a8c798589811deb4c9d5a0740 713 PRINTS PR00142 RecA protein signature 609 638 1.1E-82 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 JDM601_2483 2a86b71a8c798589811deb4c9d5a0740 713 PRINTS PR00142 RecA protein signature 129 158 1.1E-82 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 JDM601_2483 2a86b71a8c798589811deb4c9d5a0740 713 PRINTS PR00142 RecA protein signature 167 196 1.1E-82 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 JDM601_2483 2a86b71a8c798589811deb4c9d5a0740 713 Pfam PF03161 LAGLIDADG DNA endonuclease family 318 493 1.4E-37 T 12-10-2018 IPR004860 Homing endonuclease, LAGLIDADG GO:0004519 JDM601_2483 2a86b71a8c798589811deb4c9d5a0740 713 SMART SM00306 204 308 4.3E-20 T 12-10-2018 IPR003587 Hint domain N-terminal Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 JDM601_2483 2a86b71a8c798589811deb4c9d5a0740 713 SMART SM00305 527 575 3.8E-6 T 12-10-2018 IPR003586 Hint domain C-terminal Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 JDM601_2483 2a86b71a8c798589811deb4c9d5a0740 713 Gene3D G3DSA:3.40.50.300 38 236 8.2E-64 T 12-10-2018 JDM601_2483 2a86b71a8c798589811deb4c9d5a0740 713 TIGRFAM TIGR01445 intein_Nterm: intein N-terminal splicing region 206 288 8.8E-14 T 12-10-2018 IPR006141 Intein N-terminal splicing region GO:0016539 Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 JDM601_2483 2a86b71a8c798589811deb4c9d5a0740 713 SUPERFAMILY SSF51294 205 568 8.63E-27 T 12-10-2018 IPR036844 Hint domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 JDM601_3131 d296b338e9156f8eab6d8ae61160cb4f 262 TIGRFAM TIGR01698 PUNP: purine nucleotide phosphorylase 23 260 7.2E-104 T 12-10-2018 IPR011269 Putative purine nucleotide phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 JDM601_3131 d296b338e9156f8eab6d8ae61160cb4f 262 SUPERFAMILY SSF53167 7 262 5.98E-78 T 12-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 JDM601_3131 d296b338e9156f8eab6d8ae61160cb4f 262 TIGRFAM TIGR01697 PNPH-PUNA-XAPA: inosine/guanosine/xanthosine phosphorylase family 23 259 5.2E-83 T 12-10-2018 IPR011268 Purine nucleoside phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-6798695|Reactome: R-HSA-74217|Reactome: R-HSA-74259 JDM601_3131 d296b338e9156f8eab6d8ae61160cb4f 262 ProSitePatterns PS01240 Purine and other phosphorylases family 2 signature. 77 118 - T 12-10-2018 IPR018099 Purine phosphorylase, family 2, conserved site GO:0016763 JDM601_3131 d296b338e9156f8eab6d8ae61160cb4f 262 PIRSF PIRSF000477 3 262 9.1E-99 T 12-10-2018 IPR011268 Purine nucleoside phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-6798695|Reactome: R-HSA-74217|Reactome: R-HSA-74259 JDM601_3131 d296b338e9156f8eab6d8ae61160cb4f 262 Gene3D G3DSA:3.40.50.1580 2 261 7.4E-92 T 12-10-2018 JDM601_3131 d296b338e9156f8eab6d8ae61160cb4f 262 Pfam PF01048 Phosphorylase superfamily 23 260 4.9E-47 T 12-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 JDM601_0376 ba1880fa86275528e75126e8dbcf0bed 226 Pfam PF02254 TrkA-N domain 5 118 2.5E-25 T 12-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 JDM601_0376 ba1880fa86275528e75126e8dbcf0bed 226 Pfam PF02080 TrkA-C domain 151 206 6.1E-9 T 12-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 JDM601_0376 ba1880fa86275528e75126e8dbcf0bed 226 PRINTS PR00335 TrkA potassium uptake protein signature 59 69 1.2E-7 T 12-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 JDM601_0376 ba1880fa86275528e75126e8dbcf0bed 226 PRINTS PR00335 TrkA potassium uptake protein signature 2 16 1.2E-7 T 12-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 JDM601_0376 ba1880fa86275528e75126e8dbcf0bed 226 PRINTS PR00335 TrkA potassium uptake protein signature 72 86 1.2E-7 T 12-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 JDM601_0376 ba1880fa86275528e75126e8dbcf0bed 226 PRINTS PR00335 TrkA potassium uptake protein signature 19 33 1.2E-7 T 12-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 JDM601_0376 ba1880fa86275528e75126e8dbcf0bed 226 SUPERFAMILY SSF116726 137 203 4.71E-10 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 JDM601_0376 ba1880fa86275528e75126e8dbcf0bed 226 SUPERFAMILY SSF51735 1 145 1.1E-28 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_0376 ba1880fa86275528e75126e8dbcf0bed 226 Gene3D G3DSA:3.30.70.1450 137 218 3.8E-13 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 JDM601_0376 ba1880fa86275528e75126e8dbcf0bed 226 Gene3D G3DSA:3.40.50.720 1 136 1.6E-30 T 12-10-2018 JDM601_1079 6b4c3893a9613febd2b1f723b90eb0ab 170 Pfam PF07681 DoxX 8 93 4.1E-20 T 12-10-2018 IPR032808 DoxX family JDM601_2269 b5fe8312272e45ae0fa070eeb3ca1c49 518 Gene3D G3DSA:3.30.360.10 208 517 1.4E-116 T 12-10-2018 JDM601_2269 b5fe8312272e45ae0fa070eeb3ca1c49 518 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 32 517 2.6E-202 T 12-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 JDM601_2269 b5fe8312272e45ae0fa070eeb3ca1c49 518 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 221 516 5.4E-108 T 12-10-2018 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 JDM601_2269 b5fe8312272e45ae0fa070eeb3ca1c49 518 SUPERFAMILY SSF51735 22 222 9.65E-63 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_2269 b5fe8312272e45ae0fa070eeb3ca1c49 518 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 36 219 1.0E-62 T 12-10-2018 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 JDM601_2269 b5fe8312272e45ae0fa070eeb3ca1c49 518 PIRSF PIRSF000110 7 518 2.8E-176 T 12-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 JDM601_2269 b5fe8312272e45ae0fa070eeb3ca1c49 518 Gene3D G3DSA:3.40.50.720 32 207 4.8E-56 T 12-10-2018 JDM601_2269 b5fe8312272e45ae0fa070eeb3ca1c49 518 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 175 188 6.3E-49 T 12-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 JDM601_2269 b5fe8312272e45ae0fa070eeb3ca1c49 518 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 251 268 6.3E-49 T 12-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 JDM601_2269 b5fe8312272e45ae0fa070eeb3ca1c49 518 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 269 285 6.3E-49 T 12-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 JDM601_2269 b5fe8312272e45ae0fa070eeb3ca1c49 518 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 358 384 6.3E-49 T 12-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 JDM601_2269 b5fe8312272e45ae0fa070eeb3ca1c49 518 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 199 227 6.3E-49 T 12-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 JDM601_2269 b5fe8312272e45ae0fa070eeb3ca1c49 518 SUPERFAMILY SSF55347 209 516 5.56E-109 T 12-10-2018 JDM601_2269 b5fe8312272e45ae0fa070eeb3ca1c49 518 ProSitePatterns PS00069 Glucose-6-phosphate dehydrogenase active site. 209 215 - T 12-10-2018 IPR019796 Glucose-6-phosphate dehydrogenase, active site GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 JDM601_2269 b5fe8312272e45ae0fa070eeb3ca1c49 518 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 32 517 89.379 T 12-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 JDM601_2611 62479387137d8b7ed2cdf1191d995776 280 Gene3D G3DSA:3.40.50.10490 10 214 3.8E-91 T 12-10-2018 JDM601_2611 62479387137d8b7ed2cdf1191d995776 280 PRINTS PR00395 Ribosomal protein S2 signature 175 186 4.8E-39 T 12-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JDM601_2611 62479387137d8b7ed2cdf1191d995776 280 PRINTS PR00395 Ribosomal protein S2 signature 87 104 4.8E-39 T 12-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JDM601_2611 62479387137d8b7ed2cdf1191d995776 280 PRINTS PR00395 Ribosomal protein S2 signature 37 46 4.8E-39 T 12-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JDM601_2611 62479387137d8b7ed2cdf1191d995776 280 PRINTS PR00395 Ribosomal protein S2 signature 196 210 4.8E-39 T 12-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JDM601_2611 62479387137d8b7ed2cdf1191d995776 280 PRINTS PR00395 Ribosomal protein S2 signature 6 24 4.8E-39 T 12-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JDM601_2611 62479387137d8b7ed2cdf1191d995776 280 PRINTS PR00395 Ribosomal protein S2 signature 158 175 4.8E-39 T 12-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JDM601_2611 62479387137d8b7ed2cdf1191d995776 280 Pfam PF00318 Ribosomal protein S2 9 224 3.4E-97 T 12-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JDM601_2611 62479387137d8b7ed2cdf1191d995776 280 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 6 17 - T 12-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 JDM601_2611 62479387137d8b7ed2cdf1191d995776 280 Gene3D G3DSA:1.10.287.610 97 152 3.8E-91 T 12-10-2018 JDM601_2611 62479387137d8b7ed2cdf1191d995776 280 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 3 226 5.1E-111 T 12-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JDM601_2611 62479387137d8b7ed2cdf1191d995776 280 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 2 231 42.486 T 12-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JDM601_2611 62479387137d8b7ed2cdf1191d995776 280 SUPERFAMILY SSF52313 6 229 3.66E-95 T 12-10-2018 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily JDM601_3977 0ad44204c824e197d2ef9e034053db82 505 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 265 454 1.6E-63 T 12-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 JDM601_3977 0ad44204c824e197d2ef9e034053db82 505 SUPERFAMILY SSF53067 4 259 1.99E-83 T 12-10-2018 JDM601_3977 0ad44204c824e197d2ef9e034053db82 505 Gene3D G3DSA:3.30.420.40 2 257 3.0E-99 T 12-10-2018 JDM601_3977 0ad44204c824e197d2ef9e034053db82 505 SUPERFAMILY SSF53067 259 502 2.16E-81 T 12-10-2018 JDM601_3977 0ad44204c824e197d2ef9e034053db82 505 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 134 146 - T 12-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 JDM601_3977 0ad44204c824e197d2ef9e034053db82 505 Gene3D G3DSA:3.30.420.40 258 504 3.4E-92 T 12-10-2018 JDM601_3977 0ad44204c824e197d2ef9e034053db82 505 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 4 501 4.7E-223 T 12-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 JDM601_3977 0ad44204c824e197d2ef9e034053db82 505 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 6 256 3.4E-69 T 12-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 JDM601_3977 0ad44204c824e197d2ef9e034053db82 505 PIRSF PIRSF000538 2 505 7.3E-157 T 12-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 JDM601_3977 0ad44204c824e197d2ef9e034053db82 505 Hamap MF_00186 Glycerol kinase [glpK]. 2 502 53.895 T 12-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 JDM601_3977 0ad44204c824e197d2ef9e034053db82 505 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 367 387 - T 12-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 JDM601_0600 9ca9e954fb96cdfb46b71a867f94ccfe 2090 SUPERFAMILY SSF52540 100 1105 3.55E-28 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_0600 9ca9e954fb96cdfb46b71a867f94ccfe 2090 Pfam PF09369 Domain of unknown function (DUF1998) 1566 1651 1.6E-8 T 12-10-2018 IPR018973 DEAD/DEAH-box helicase, putative JDM601_0600 9ca9e954fb96cdfb46b71a867f94ccfe 2090 Pfam PF00271 Helicase conserved C-terminal domain 1013 1082 9.9E-11 T 12-10-2018 IPR001650 Helicase, C-terminal JDM601_0600 9ca9e954fb96cdfb46b71a867f94ccfe 2090 SUPERFAMILY SSF52540 78 293 4.32E-24 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_0600 9ca9e954fb96cdfb46b71a867f94ccfe 2090 Gene3D G3DSA:3.40.50.300 69 306 2.5E-33 T 12-10-2018 JDM601_0600 9ca9e954fb96cdfb46b71a867f94ccfe 2090 Gene3D G3DSA:3.40.50.300 993 1104 8.9E-17 T 12-10-2018 JDM601_0600 9ca9e954fb96cdfb46b71a867f94ccfe 2090 SMART SM00490 997 1083 1.5E-16 T 12-10-2018 IPR001650 Helicase, C-terminal JDM601_0600 9ca9e954fb96cdfb46b71a867f94ccfe 2090 Pfam PF00270 DEAD/DEAH box helicase 83 256 5.9E-18 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 JDM601_0600 9ca9e954fb96cdfb46b71a867f94ccfe 2090 SMART SM00487 75 332 2.8E-15 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain JDM601_1560 b20d3ce433b1655946de33247149c234 288 Pfam PF00581 Rhodanese-like domain 10 131 1.2E-17 T 12-10-2018 IPR001763 Rhodanese-like domain JDM601_1560 b20d3ce433b1655946de33247149c234 288 Pfam PF00581 Rhodanese-like domain 164 277 1.4E-9 T 12-10-2018 IPR001763 Rhodanese-like domain JDM601_1560 b20d3ce433b1655946de33247149c234 288 ProSitePatterns PS00380 Rhodanese signature 1. 42 53 - T 12-10-2018 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350|MetaCyc: PWY-7927|Reactome: R-HSA-1614558 JDM601_1560 b20d3ce433b1655946de33247149c234 288 Gene3D G3DSA:3.40.250.10 161 288 1.5E-29 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily JDM601_1560 b20d3ce433b1655946de33247149c234 288 SUPERFAMILY SSF52821 2 151 2.36E-36 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily JDM601_1560 b20d3ce433b1655946de33247149c234 288 Gene3D G3DSA:3.40.250.10 2 154 1.5E-40 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily JDM601_1560 b20d3ce433b1655946de33247149c234 288 SUPERFAMILY SSF52821 171 286 6.16E-28 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily JDM601_1560 b20d3ce433b1655946de33247149c234 288 SMART SM00450 10 135 8.1E-21 T 12-10-2018 IPR001763 Rhodanese-like domain JDM601_1560 b20d3ce433b1655946de33247149c234 288 SMART SM00450 163 281 1.1E-13 T 12-10-2018 IPR001763 Rhodanese-like domain JDM601_2964 dd2d2bc9f14395c8c0c2221afbc3c4fc 326 Gene3D G3DSA:3.40.50.300 98 263 2.5E-35 T 12-10-2018 JDM601_2964 dd2d2bc9f14395c8c0c2221afbc3c4fc 326 SUPERFAMILY SSF52540 113 285 2.39E-34 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_2964 dd2d2bc9f14395c8c0c2221afbc3c4fc 326 Pfam PF03193 RsgA GTPase 97 263 1.3E-39 T 12-10-2018 IPR010914 RsgA GTPase domain GO:0003924|GO:0005525 JDM601_2964 dd2d2bc9f14395c8c0c2221afbc3c4fc 326 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 71 303 1.4E-39 T 12-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 JDM601_0239 6f3444562c467c7a4eaaa924eaf67772 836 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 624 760 1.9E-16 T 12-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 JDM601_0239 6f3444562c467c7a4eaaa924eaf67772 836 TIGRFAM TIGR02374 nitri_red_nirB: nitrite reductase [NAD(P)H], large subunit 1 793 0.0 T 12-10-2018 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB GO:0008942|GO:0042128|GO:0050660|GO:0050661|GO:0055114 JDM601_0239 6f3444562c467c7a4eaaa924eaf67772 836 SUPERFAMILY SSF51905 3 184 1.5E-34 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_0239 6f3444562c467c7a4eaaa924eaf67772 836 Gene3D G3DSA:3.50.50.60 1 280 1.7E-76 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_0239 6f3444562c467c7a4eaaa924eaf67772 836 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 21 280 1.5E-41 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JDM601_0239 6f3444562c467c7a4eaaa924eaf67772 836 Gene3D G3DSA:3.30.413.10 623 785 5.7E-35 T 12-10-2018 JDM601_0239 6f3444562c467c7a4eaaa924eaf67772 836 PRINTS PR00397 Sirohaem Fe-binding site signature 671 689 1.6E-5 T 12-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 JDM601_0239 6f3444562c467c7a4eaaa924eaf67772 836 PRINTS PR00397 Sirohaem Fe-binding site signature 628 646 1.6E-5 T 12-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 JDM601_0239 6f3444562c467c7a4eaaa924eaf67772 836 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 552 612 1.5E-9 T 12-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 JDM601_0239 6f3444562c467c7a4eaaa924eaf67772 836 Pfam PF04324 BFD-like [2Fe-2S] binding domain 420 466 2.1E-10 T 12-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain JDM601_0239 6f3444562c467c7a4eaaa924eaf67772 836 Gene3D G3DSA:1.10.10.1100 419 472 2.5E-11 T 12-10-2018 JDM601_0239 6f3444562c467c7a4eaaa924eaf67772 836 SUPERFAMILY SSF56014 625 799 5.23E-48 T 12-10-2018 JDM601_0239 6f3444562c467c7a4eaaa924eaf67772 836 SUPERFAMILY SSF55124 495 633 6.05E-24 T 12-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 JDM601_0239 6f3444562c467c7a4eaaa924eaf67772 836 PIRSF PIRSF037149 1 826 0.0 T 12-10-2018 IPR017121 Nitrite reductase [NAD(P)H], large subunit GO:0042128 JDM601_0239 6f3444562c467c7a4eaaa924eaf67772 836 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 671 687 - T 12-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 JDM601_0239 6f3444562c467c7a4eaaa924eaf67772 836 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 90 108 2.1E-13 T 12-10-2018 JDM601_0239 6f3444562c467c7a4eaaa924eaf67772 836 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 258 280 2.1E-13 T 12-10-2018 JDM601_0239 6f3444562c467c7a4eaaa924eaf67772 836 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 141 159 2.1E-13 T 12-10-2018 JDM601_0239 6f3444562c467c7a4eaaa924eaf67772 836 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 231 247 2.1E-13 T 12-10-2018 JDM601_0239 6f3444562c467c7a4eaaa924eaf67772 836 Gene3D G3DSA:3.50.50.60 98 243 1.7E-76 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_0239 6f3444562c467c7a4eaaa924eaf67772 836 SUPERFAMILY SSF51905 69 332 7.47E-27 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_1795 e281e70818782d3d87b0c1d9c73dfb7e 277 TIGRFAM TIGR03690 20S_bact_beta: proteasome, beta subunit 38 263 2.3E-108 T 12-10-2018 IPR022483 Peptidase T1A, proteasome beta-subunit, actinobacteria GO:0004298|GO:0005839|GO:0010498 JDM601_1795 e281e70818782d3d87b0c1d9c73dfb7e 277 Hamap MF_02113_B Proteasome subunit beta [prcB]. 2 268 44.503 T 12-10-2018 IPR022483 Peptidase T1A, proteasome beta-subunit, actinobacteria GO:0004298|GO:0005839|GO:0010498 JDM601_1795 e281e70818782d3d87b0c1d9c73dfb7e 277 Gene3D G3DSA:3.60.20.10 42 276 3.8E-82 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal JDM601_1795 e281e70818782d3d87b0c1d9c73dfb7e 277 Pfam PF00227 Proteasome subunit 40 224 2.8E-27 T 12-10-2018 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: R-HSA-1169091|Reactome: R-HSA-1234176|Reactome: R-HSA-1236974|Reactome: R-HSA-1236978|Reactome: R-HSA-174084|Reactome: R-HSA-174113|Reactome: R-HSA-174154|Reactome: R-HSA-174178|Reactome: R-HSA-174184|Reactome: R-HSA-180534|Reactome: R-HSA-180585|Reactome: R-HSA-187577|Reactome: R-HSA-195253|Reactome: R-HSA-202424|Reactome: R-HSA-211733|Reactome: R-HSA-2467813|Reactome: R-HSA-2871837|Reactome: R-HSA-349425|Reactome: R-HSA-350562|Reactome: R-HSA-382556|Reactome: R-HSA-450408|Reactome: R-HSA-4608870|Reactome: R-HSA-4641257|Reactome: R-HSA-4641258|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5607761|Reactome: R-HSA-5607764|Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5632684|Reactome: R-HSA-5658442|Reactome: R-HSA-5668541|Reactome: R-HSA-5676590|Reactome: R-HSA-5678895|Reactome: R-HSA-5687128|Reactome: R-HSA-5689603|Reactome: R-HSA-5689880|Reactome: R-HSA-68827|Reactome: R-HSA-68949|Reactome: R-HSA-69017|Reactome: R-HSA-69229|Reactome: R-HSA-69481|Reactome: R-HSA-69601|Reactome: R-HSA-8852276|Reactome: R-HSA-8854050|Reactome: R-HSA-8939236|Reactome: R-HSA-8939902|Reactome: R-HSA-8941858|Reactome: R-HSA-8948751|Reactome: R-HSA-8951664|Reactome: R-HSA-9010553|Reactome: R-HSA-9020702|Reactome: R-HSA-9604323|Reactome: R-HSA-983168 JDM601_1795 e281e70818782d3d87b0c1d9c73dfb7e 277 SUPERFAMILY SSF56235 14 258 1.28E-48 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal JDM601_0480 e9a5326ba2f0c5e01fd41d290032c8ea 2379 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 710 958 1.4E-95 T 12-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal JDM601_0480 e9a5326ba2f0c5e01fd41d290032c8ea 2379 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 966 1083 6.3E-41 T 12-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal JDM601_0480 e9a5326ba2f0c5e01fd41d290032c8ea 2379 SUPERFAMILY SSF53901 707 1131 1.2E-102 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 JDM601_0480 e9a5326ba2f0c5e01fd41d290032c8ea 2379 Gene3D G3DSA:3.40.50.720 1720 2219 7.0E-130 T 12-10-2018 JDM601_0480 e9a5326ba2f0c5e01fd41d290032c8ea 2379 ProSitePatterns PS00455 Putative AMP-binding domain signature. 174 185 - T 12-10-2018 IPR020845 AMP-binding, conserved site JDM601_0480 e9a5326ba2f0c5e01fd41d290032c8ea 2379 SUPERFAMILY SSF47336 615 724 6.67E-19 T 12-10-2018 IPR036736 ACP-like superfamily JDM601_0480 e9a5326ba2f0c5e01fd41d290032c8ea 2379 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 1086 1172 1.2E-18 T 12-10-2018 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 JDM601_0480 e9a5326ba2f0c5e01fd41d290032c8ea 2379 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 871 887 - T 12-10-2018 IPR018201 Beta-ketoacyl synthase, active site JDM601_0480 e9a5326ba2f0c5e01fd41d290032c8ea 2379 Pfam PF00501 AMP-binding enzyme 20 470 1.8E-83 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 JDM601_0480 e9a5326ba2f0c5e01fd41d290032c8ea 2379 SUPERFAMILY SSF47336 2240 2339 1.44E-15 T 12-10-2018 IPR036736 ACP-like superfamily JDM601_0480 e9a5326ba2f0c5e01fd41d290032c8ea 2379 Pfam PF08659 KR domain 1969 2146 9.3E-68 T 12-10-2018 IPR013968 Polyketide synthase, ketoreductase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 JDM601_0480 e9a5326ba2f0c5e01fd41d290032c8ea 2379 SMART SM00823 Phosphopantetheine attachment site 2247 2318 4.2E-13 T 12-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 JDM601_0480 e9a5326ba2f0c5e01fd41d290032c8ea 2379 SMART SM00823 Phosphopantetheine attachment site 619 690 6.1E-15 T 12-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 JDM601_0480 e9a5326ba2f0c5e01fd41d290032c8ea 2379 Pfam PF00698 Acyl transferase domain 1243 1553 5.9E-85 T 12-10-2018 IPR014043 Acyl transferase JDM601_0480 e9a5326ba2f0c5e01fd41d290032c8ea 2379 Gene3D G3DSA:3.40.47.10 702 1154 7.4E-201 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 JDM601_0480 e9a5326ba2f0c5e01fd41d290032c8ea 2379 Gene3D G3DSA:3.40.50.12780 4 462 9.6E-158 T 12-10-2018 JDM601_0480 e9a5326ba2f0c5e01fd41d290032c8ea 2379 SUPERFAMILY SSF51735 1716 1951 9.45E-34 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_0480 e9a5326ba2f0c5e01fd41d290032c8ea 2379 Gene3D G3DSA:1.10.1200.10 607 689 1.1E-25 T 12-10-2018 IPR036736 ACP-like superfamily JDM601_0480 e9a5326ba2f0c5e01fd41d290032c8ea 2379 SUPERFAMILY SSF52151 1242 1528 1.39E-66 T 12-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase JDM601_0480 e9a5326ba2f0c5e01fd41d290032c8ea 2379 Gene3D G3DSA:1.10.1200.10 2233 2320 6.4E-13 T 12-10-2018 IPR036736 ACP-like superfamily JDM601_0480 e9a5326ba2f0c5e01fd41d290032c8ea 2379 Gene3D G3DSA:3.30.300.30 464 592 2.3E-41 T 12-10-2018 JDM601_0480 e9a5326ba2f0c5e01fd41d290032c8ea 2379 Gene3D G3DSA:3.30.70.3290 1155 1589 6.0E-140 T 12-10-2018 JDM601_0480 e9a5326ba2f0c5e01fd41d290032c8ea 2379 Pfam PF00550 Phosphopantetheine attachment site 2249 2314 3.6E-11 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain JDM601_0480 e9a5326ba2f0c5e01fd41d290032c8ea 2379 Pfam PF00550 Phosphopantetheine attachment site 621 686 2.3E-10 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain JDM601_0480 e9a5326ba2f0c5e01fd41d290032c8ea 2379 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 1245 1542 3.3E-112 T 12-10-2018 IPR020801 Polyketide synthase, acyl transferase domain JDM601_0480 e9a5326ba2f0c5e01fd41d290032c8ea 2379 SUPERFAMILY SSF56801 10 577 3.92E-107 T 12-10-2018 JDM601_0480 e9a5326ba2f0c5e01fd41d290032c8ea 2379 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 1969 2148 2.6E-56 T 12-10-2018 JDM601_0480 e9a5326ba2f0c5e01fd41d290032c8ea 2379 Gene3D G3DSA:3.40.366.10 1243 1545 6.0E-140 T 12-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 JDM601_0480 e9a5326ba2f0c5e01fd41d290032c8ea 2379 SMART SM01294 620 686 7.0E-7 T 12-10-2018 JDM601_0480 e9a5326ba2f0c5e01fd41d290032c8ea 2379 SUPERFAMILY SSF55048 1368 1433 3.79E-9 T 12-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding JDM601_0480 e9a5326ba2f0c5e01fd41d290032c8ea 2379 SUPERFAMILY SSF51735 1968 2200 9.5E-44 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_0480 e9a5326ba2f0c5e01fd41d290032c8ea 2379 SMART SM00825 Beta-ketoacyl synthase 712 1135 6.8E-224 T 12-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain JDM601_4334 9414bd6a2a5340e3abc4ac1de15de272 1128 PRINTS PR01806 Virulence factor MviN signature 378 397 2.2E-19 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ JDM601_4334 9414bd6a2a5340e3abc4ac1de15de272 1128 PRINTS PR01806 Virulence factor MviN signature 47 66 2.2E-19 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ JDM601_4334 9414bd6a2a5340e3abc4ac1de15de272 1128 PRINTS PR01806 Virulence factor MviN signature 168 189 2.2E-19 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ JDM601_4334 9414bd6a2a5340e3abc4ac1de15de272 1128 PRINTS PR01806 Virulence factor MviN signature 144 168 2.2E-19 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ JDM601_4334 9414bd6a2a5340e3abc4ac1de15de272 1128 PRINTS PR01806 Virulence factor MviN signature 66 82 2.2E-19 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ JDM601_4334 9414bd6a2a5340e3abc4ac1de15de272 1128 PRINTS PR01806 Virulence factor MviN signature 280 306 2.2E-19 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ JDM601_4334 9414bd6a2a5340e3abc4ac1de15de272 1128 SUPERFAMILY SSF56112 653 832 3.51E-6 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily JDM601_4334 9414bd6a2a5340e3abc4ac1de15de272 1128 Gene3D G3DSA:1.10.510.10 739 890 1.7E-38 T 12-10-2018 JDM601_4334 9414bd6a2a5340e3abc4ac1de15de272 1128 Gene3D G3DSA:3.30.200.20 646 738 1.3E-33 T 12-10-2018 JDM601_4334 9414bd6a2a5340e3abc4ac1de15de272 1128 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 24 539 5.7E-74 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ JDM601_4334 9414bd6a2a5340e3abc4ac1de15de272 1128 Pfam PF03023 MviN-like protein 43 513 2.4E-119 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ JDM601_2488 756e3e0a6611c9603e9a12c204057345 145 Pfam PF07858 Limonene-1,2-epoxide hydrolase catalytic domain 12 131 2.4E-48 T 12-10-2018 IPR013100 Limonene-1,2-epoxide hydrolase JDM601_2488 756e3e0a6611c9603e9a12c204057345 145 Gene3D G3DSA:3.10.450.50 5 145 2.5E-45 T 12-10-2018 JDM601_2488 756e3e0a6611c9603e9a12c204057345 145 SUPERFAMILY SSF54427 12 134 2.03E-36 T 12-10-2018 IPR032710 NTF2-like domain superfamily JDM601_1890 f5e2ddff7dd37366059a826dc72f29f2 586 SUPERFAMILY SSF81342 105 332 2.9E-13 T 12-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 JDM601_1890 f5e2ddff7dd37366059a826dc72f29f2 586 Gene3D G3DSA:1.20.950.20 172 326 2.6E-11 T 12-10-2018 JDM601_1890 f5e2ddff7dd37366059a826dc72f29f2 586 Gene3D G3DSA:3.90.420.10 403 578 7.7E-46 T 12-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 JDM601_1890 f5e2ddff7dd37366059a826dc72f29f2 586 SUPERFAMILY SSF56524 400 576 1.09E-47 T 12-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 JDM601_1890 f5e2ddff7dd37366059a826dc72f29f2 586 Pfam PF00174 Oxidoreductase molybdopterin binding domain 423 562 2.4E-31 T 12-10-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 JDM601_1890 f5e2ddff7dd37366059a826dc72f29f2 586 Pfam PF01292 Prokaryotic cytochrome b561 106 331 7.6E-15 T 12-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 JDM601_2504 1749cca9eab760e8ad45584342e05c70 254 TIGRFAM TIGR02170 thyX: thymidylate synthase, flavin-dependent 9 234 1.3E-62 T 12-10-2018 IPR003669 Thymidylate synthase ThyX GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00670+2.1.1.148|MetaCyc: PWY-6545 JDM601_2504 1749cca9eab760e8ad45584342e05c70 254 SUPERFAMILY SSF69796 29 241 4.32E-61 T 12-10-2018 IPR036098 Thymidylate synthase ThyX superfamily GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00670+2.1.1.148|MetaCyc: PWY-6545 JDM601_2504 1749cca9eab760e8ad45584342e05c70 254 Gene3D G3DSA:3.30.70.3180 136 254 4.1E-36 T 12-10-2018 JDM601_2504 1749cca9eab760e8ad45584342e05c70 254 Pfam PF02511 Thymidylate synthase complementing protein 31 228 4.4E-53 T 12-10-2018 IPR003669 Thymidylate synthase ThyX GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00670+2.1.1.148|MetaCyc: PWY-6545 JDM601_2504 1749cca9eab760e8ad45584342e05c70 254 Gene3D G3DSA:3.30.70.3180 59 135 7.3E-24 T 12-10-2018 JDM601_2504 1749cca9eab760e8ad45584342e05c70 254 Hamap MF_01408 Flavin-dependent thymidylate synthase [thyX]. 7 242 27.402 T 12-10-2018 IPR003669 Thymidylate synthase ThyX GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00670+2.1.1.148|MetaCyc: PWY-6545 JDM601_3070 5ce0a06c7b43bc63f28c77f7f1b03e75 75 Pfam PF09360 Iron-binding zinc finger CDGSH type 14 58 5.6E-15 T 12-10-2018 IPR018967 Iron sulphur-containing domain, CDGSH-type GO:0043231|GO:0051537 JDM601_3070 5ce0a06c7b43bc63f28c77f7f1b03e75 75 SMART SM00704 20 63 6.0E-8 T 12-10-2018 IPR018967 Iron sulphur-containing domain, CDGSH-type GO:0043231|GO:0051537 JDM601_3070 5ce0a06c7b43bc63f28c77f7f1b03e75 75 Gene3D G3DSA:3.40.5.90 8 69 1.5E-10 T 12-10-2018 JDM601_1743 c19e878a18974a65658e54decd166e42 385 SUPERFAMILY SSF53756 16 374 3.14E-93 T 12-10-2018 JDM601_1743 c19e878a18974a65658e54decd166e42 385 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 16 158 1.8E-37 T 12-10-2018 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 JDM601_1743 c19e878a18974a65658e54decd166e42 385 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 14 369 1.6E-84 T 12-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 JDM601_1743 c19e878a18974a65658e54decd166e42 385 Gene3D G3DSA:3.40.50.2000 176 358 6.8E-94 T 12-10-2018 JDM601_1743 c19e878a18974a65658e54decd166e42 385 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 204 365 1.3E-37 T 12-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 JDM601_1743 c19e878a18974a65658e54decd166e42 385 Gene3D G3DSA:3.40.50.2000 17 364 6.8E-94 T 12-10-2018 JDM601_1743 c19e878a18974a65658e54decd166e42 385 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 16 374 31.28 T 12-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 JDM601_1213 e31e6dcb4e2c51f5635bd17adfd57c3f 387 Gene3D G3DSA:3.40.50.10380 9 161 2.4E-63 T 12-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 JDM601_1213 e31e6dcb4e2c51f5635bd17adfd57c3f 387 Gene3D G3DSA:3.40.50.720 162 387 8.0E-73 T 12-10-2018 JDM601_1213 e31e6dcb4e2c51f5635bd17adfd57c3f 387 PRINTS PR00072 Malic enzyme signature 191 207 5.5E-7 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 JDM601_1213 e31e6dcb4e2c51f5635bd17adfd57c3f 387 PRINTS PR00072 Malic enzyme signature 160 176 5.5E-7 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 JDM601_1213 e31e6dcb4e2c51f5635bd17adfd57c3f 387 PRINTS PR00072 Malic enzyme signature 81 103 5.5E-7 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 JDM601_1213 e31e6dcb4e2c51f5635bd17adfd57c3f 387 SMART SM01274 19 152 6.6E-71 T 12-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 JDM601_1213 e31e6dcb4e2c51f5635bd17adfd57c3f 387 ProSitePatterns PS00331 Malic enzymes signature. 160 176 - T 12-10-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 JDM601_1213 e31e6dcb4e2c51f5635bd17adfd57c3f 387 SUPERFAMILY SSF51735 164 384 2.19E-67 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_1213 e31e6dcb4e2c51f5635bd17adfd57c3f 387 PIRSF PIRSF000106 31 387 8.7E-70 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 JDM601_1213 e31e6dcb4e2c51f5635bd17adfd57c3f 387 Pfam PF03949 Malic enzyme, NAD binding domain 166 365 1.0E-21 T 12-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 JDM601_1213 e31e6dcb4e2c51f5635bd17adfd57c3f 387 Pfam PF00390 Malic enzyme, N-terminal domain 22 150 2.4E-24 T 12-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 JDM601_1213 e31e6dcb4e2c51f5635bd17adfd57c3f 387 SUPERFAMILY SSF53223 13 162 1.08E-50 T 12-10-2018 JDM601_1213 e31e6dcb4e2c51f5635bd17adfd57c3f 387 SMART SM00919 164 384 5.1E-112 T 12-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 JDM601_2442 a0eef8cf1e10f69cab50de23674ecfe4 216 Pfam PF13399 LytR cell envelope-related transcriptional attenuator 91 179 3.7E-14 T 12-10-2018 IPR027381 Putative LytR/CpsA/Psr regulator, C-terminal domain JDM601_3218 0e08d0c94028a0e1b8c55b9c34b5d234 513 Pfam PF00117 Glutamine amidotransferase class-I 3 181 2.3E-39 T 12-10-2018 IPR017926 Glutamine amidotransferase JDM601_3218 0e08d0c94028a0e1b8c55b9c34b5d234 513 SUPERFAMILY SSF52402 175 433 2.21E-51 T 12-10-2018 JDM601_3218 0e08d0c94028a0e1b8c55b9c34b5d234 513 Pfam PF02540 NAD synthase 205 237 2.5E-5 T 12-10-2018 IPR022310 NAD/GMP synthase JDM601_3218 0e08d0c94028a0e1b8c55b9c34b5d234 513 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 195 513 3.5E-143 T 12-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 JDM601_3218 0e08d0c94028a0e1b8c55b9c34b5d234 513 Gene3D G3DSA:3.40.50.620 192 392 4.6E-68 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JDM601_3218 0e08d0c94028a0e1b8c55b9c34b5d234 513 Gene3D G3DSA:3.40.50.880 1 191 7.9E-52 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like JDM601_3218 0e08d0c94028a0e1b8c55b9c34b5d234 513 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 1 185 8.3E-73 T 12-10-2018 IPR004739 GMP synthase, glutamine amidotransferase GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 JDM601_3218 0e08d0c94028a0e1b8c55b9c34b5d234 513 PRINTS PR00096 Glutamine amidotransferase superfamily signature 72 83 1.8E-8 T 12-10-2018 JDM601_3218 0e08d0c94028a0e1b8c55b9c34b5d234 513 PRINTS PR00096 Glutamine amidotransferase superfamily signature 45 54 1.8E-8 T 12-10-2018 JDM601_3218 0e08d0c94028a0e1b8c55b9c34b5d234 513 PRINTS PR00096 Glutamine amidotransferase superfamily signature 159 172 1.8E-8 T 12-10-2018 JDM601_3218 0e08d0c94028a0e1b8c55b9c34b5d234 513 PRINTS PR00097 Anthranilate synthase component II signature 1 5 3.6E-8 T 12-10-2018 JDM601_3218 0e08d0c94028a0e1b8c55b9c34b5d234 513 PRINTS PR00097 Anthranilate synthase component II signature 45 54 3.6E-8 T 12-10-2018 JDM601_3218 0e08d0c94028a0e1b8c55b9c34b5d234 513 PRINTS PR00097 Anthranilate synthase component II signature 159 172 3.6E-8 T 12-10-2018 JDM601_3218 0e08d0c94028a0e1b8c55b9c34b5d234 513 PRINTS PR00097 Anthranilate synthase component II signature 72 83 3.6E-8 T 12-10-2018 JDM601_3218 0e08d0c94028a0e1b8c55b9c34b5d234 513 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 1 513 52.227 T 12-10-2018 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221 JDM601_3218 0e08d0c94028a0e1b8c55b9c34b5d234 513 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 72 88 5.9E-7 T 12-10-2018 JDM601_3218 0e08d0c94028a0e1b8c55b9c34b5d234 513 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 1 13 5.9E-7 T 12-10-2018 JDM601_3218 0e08d0c94028a0e1b8c55b9c34b5d234 513 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 42 56 5.9E-7 T 12-10-2018 JDM601_3218 0e08d0c94028a0e1b8c55b9c34b5d234 513 Pfam PF00958 GMP synthase C terminal domain 420 512 8.6E-39 T 12-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 JDM601_3218 0e08d0c94028a0e1b8c55b9c34b5d234 513 SUPERFAMILY SSF52317 1 219 3.25E-52 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like JDM601_3218 0e08d0c94028a0e1b8c55b9c34b5d234 513 SUPERFAMILY SSF54810 392 513 2.62E-46 T 12-10-2018 JDM601_3218 0e08d0c94028a0e1b8c55b9c34b5d234 513 Gene3D G3DSA:3.30.300.10 393 513 3.5E-52 T 12-10-2018 JDM601_2279 5ebee93467ee311699fb567141964162 327 Pfam PF10298 WhiA N-terminal LAGLIDADG-like domain 21 104 1.2E-23 T 12-10-2018 IPR018478 Sporulation transcription regulator WhiA, N-terminal domain JDM601_2279 5ebee93467ee311699fb567141964162 327 Gene3D G3DSA:1.10.10.10 216 307 7.5E-16 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JDM601_2279 5ebee93467ee311699fb567141964162 327 Hamap MF_01420 Putative sporulation transcription regulator WhiA [whiA]. 3 306 29.188 T 12-10-2018 IPR003802 Sporulation regulator WhiA GO:0043937 JDM601_2279 5ebee93467ee311699fb567141964162 327 Pfam PF14527 WhiA LAGLIDADG-like domain 127 218 8.4E-24 T 12-10-2018 IPR039518 WhiA, LAGLIDADG-like domain JDM601_2279 5ebee93467ee311699fb567141964162 327 Pfam PF02650 WhiA C-terminal HTH domain 221 303 7.6E-20 T 12-10-2018 IPR023054 Sporulation regulator WhiA, C-terminal JDM601_2279 5ebee93467ee311699fb567141964162 327 TIGRFAM TIGR00647 DNA_bind_WhiA: DNA-binding protein WhiA 4 304 2.8E-107 T 12-10-2018 IPR033981 Sporulation regulator WhiA-like JDM601_2279 5ebee93467ee311699fb567141964162 327 Gene3D G3DSA:3.10.28.10 2 212 3.3E-15 T 12-10-2018 IPR027434 Homing endonuclease JDM601_2216 e8b86fa23a6a6fb4422e4afe74ef40cd 585 Gene3D G3DSA:3.40.50.12780 7 461 1.6E-160 T 12-10-2018 JDM601_2216 e8b86fa23a6a6fb4422e4afe74ef40cd 585 Gene3D G3DSA:3.30.300.30 463 584 1.3E-29 T 12-10-2018 JDM601_2216 e8b86fa23a6a6fb4422e4afe74ef40cd 585 Pfam PF00501 AMP-binding enzyme 13 468 2.5E-78 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 JDM601_2216 e8b86fa23a6a6fb4422e4afe74ef40cd 585 SUPERFAMILY SSF56801 7 573 2.62E-96 T 12-10-2018 JDM601_1821 9deb5516178b4ef5d3f12900a146a6cd 64 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 63 2.8E-25 T 12-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 JDM601_1821 9deb5516178b4ef5d3f12900a146a6cd 64 SUPERFAMILY SSF143034 2 62 1.7E-20 T 12-10-2018 IPR037229 Ribosomal protein L35 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JDM601_1821 9deb5516178b4ef5d3f12900a146a6cd 64 PRINTS PR00064 Ribosomal protein L35 signature 3 20 2.6E-16 T 12-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 JDM601_1821 9deb5516178b4ef5d3f12900a146a6cd 64 PRINTS PR00064 Ribosomal protein L35 signature 21 35 2.6E-16 T 12-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 JDM601_1821 9deb5516178b4ef5d3f12900a146a6cd 64 PRINTS PR00064 Ribosomal protein L35 signature 36 54 2.6E-16 T 12-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 JDM601_1821 9deb5516178b4ef5d3f12900a146a6cd 64 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 31 - T 12-10-2018 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 JDM601_1821 9deb5516178b4ef5d3f12900a146a6cd 64 Gene3D G3DSA:2.40.50.530 1 63 4.9E-23 T 12-10-2018 JDM601_1821 9deb5516178b4ef5d3f12900a146a6cd 64 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 64 17.348 T 12-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 JDM601_1821 9deb5516178b4ef5d3f12900a146a6cd 64 Pfam PF01632 Ribosomal protein L35 2 62 1.6E-24 T 12-10-2018 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JDM601_0466 03b580bae2fb0a39d5f72695787ef851 227 Pfam PF01791 DeoC/LacD family aldolase 14 217 4.1E-17 T 12-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 JDM601_0466 03b580bae2fb0a39d5f72695787ef851 227 PIRSF PIRSF001357 4 226 1.6E-62 T 12-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 JDM601_0466 03b580bae2fb0a39d5f72695787ef851 227 Hamap MF_00114 Deoxyribose-phosphate aldolase [deoC]. 9 227 30.714 T 12-10-2018 IPR028581 Deoxyribose-phosphate aldolase type I GO:0004139 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180 JDM601_0466 03b580bae2fb0a39d5f72695787ef851 227 SUPERFAMILY SSF51569 6 225 1.15E-63 T 12-10-2018 JDM601_0466 03b580bae2fb0a39d5f72695787ef851 227 SMART SM01133 10 225 9.9E-70 T 12-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 JDM601_0466 03b580bae2fb0a39d5f72695787ef851 227 TIGRFAM TIGR00126 deoC: deoxyribose-phosphate aldolase 11 219 1.7E-56 T 12-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 JDM601_0466 03b580bae2fb0a39d5f72695787ef851 227 Gene3D G3DSA:3.20.20.70 2 227 2.9E-82 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JDM601_2212 a4a88cad4ab3e782cce6e7556a9b2e12 1836 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1752 1767 - T 12-10-2018 IPR006162 Phosphopantetheine attachment site JDM601_2212 a4a88cad4ab3e782cce6e7556a9b2e12 1836 SUPERFAMILY SSF52151 562 861 1.05E-56 T 12-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase JDM601_2212 a4a88cad4ab3e782cce6e7556a9b2e12 1836 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 200 216 - T 12-10-2018 IPR018201 Beta-ketoacyl synthase, active site JDM601_2212 a4a88cad4ab3e782cce6e7556a9b2e12 1836 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 413 503 1.4E-13 T 12-10-2018 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 JDM601_2212 a4a88cad4ab3e782cce6e7556a9b2e12 1836 Pfam PF14765 Polyketide synthase dehydratase 935 1220 1.1E-62 T 12-10-2018 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 JDM601_2212 a4a88cad4ab3e782cce6e7556a9b2e12 1836 SMART SM00825 Beta-ketoacyl synthase 40 462 1.6E-211 T 12-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain JDM601_2212 a4a88cad4ab3e782cce6e7556a9b2e12 1836 Gene3D G3DSA:3.40.50.720 1230 1701 3.5E-103 T 12-10-2018 JDM601_2212 a4a88cad4ab3e782cce6e7556a9b2e12 1836 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 565 878 1.3E-90 T 12-10-2018 IPR020801 Polyketide synthase, acyl transferase domain JDM601_2212 a4a88cad4ab3e782cce6e7556a9b2e12 1836 SMART SM00823 Phosphopantetheine attachment site 1725 1797 3.2E-19 T 12-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 JDM601_2212 a4a88cad4ab3e782cce6e7556a9b2e12 1836 SUPERFAMILY SSF47336 1722 1798 1.44E-11 T 12-10-2018 IPR036736 ACP-like superfamily JDM601_2212 a4a88cad4ab3e782cce6e7556a9b2e12 1836 Pfam PF00698 Acyl transferase domain 563 889 2.1E-92 T 12-10-2018 IPR014043 Acyl transferase JDM601_2212 a4a88cad4ab3e782cce6e7556a9b2e12 1836 Pfam PF00550 Phosphopantetheine attachment site 1736 1791 3.2E-8 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain JDM601_2212 a4a88cad4ab3e782cce6e7556a9b2e12 1836 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 1452 1633 1.2E-36 T 12-10-2018 JDM601_2212 a4a88cad4ab3e782cce6e7556a9b2e12 1836 Pfam PF08659 KR domain 1452 1631 1.5E-51 T 12-10-2018 IPR013968 Polyketide synthase, ketoreductase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 JDM601_2212 a4a88cad4ab3e782cce6e7556a9b2e12 1836 SUPERFAMILY SSF53901 35 458 7.64E-101 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 JDM601_2212 a4a88cad4ab3e782cce6e7556a9b2e12 1836 Gene3D G3DSA:3.30.70.250 683 749 1.7E-122 T 12-10-2018 JDM601_2212 a4a88cad4ab3e782cce6e7556a9b2e12 1836 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 296 409 3.8E-41 T 12-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal JDM601_2212 a4a88cad4ab3e782cce6e7556a9b2e12 1836 Gene3D G3DSA:3.40.47.10 34 464 1.8E-187 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 JDM601_2212 a4a88cad4ab3e782cce6e7556a9b2e12 1836 Gene3D G3DSA:1.10.1200.10 1721 1797 2.6E-13 T 12-10-2018 IPR036736 ACP-like superfamily JDM601_2212 a4a88cad4ab3e782cce6e7556a9b2e12 1836 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 38 287 2.9E-94 T 12-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal JDM601_2212 a4a88cad4ab3e782cce6e7556a9b2e12 1836 SMART SM00826 935 1098 4.0E-39 T 12-10-2018 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 JDM601_2212 a4a88cad4ab3e782cce6e7556a9b2e12 1836 SUPERFAMILY SSF51735 1450 1665 1.92E-34 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_2212 a4a88cad4ab3e782cce6e7556a9b2e12 1836 Gene3D G3DSA:3.40.366.20 477 891 1.7E-122 T 12-10-2018 JDM601_2212 a4a88cad4ab3e782cce6e7556a9b2e12 1836 SUPERFAMILY SSF51735 1227 1440 1.44E-28 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_2212 a4a88cad4ab3e782cce6e7556a9b2e12 1836 SUPERFAMILY SSF55048 685 749 3.4E-10 T 12-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding JDM601_2212 a4a88cad4ab3e782cce6e7556a9b2e12 1836 Gene3D G3DSA:3.10.129.110 933 1221 2.6E-64 T 12-10-2018 JDM601_3599 fb5ae8c2ac0a2da2c691ce1e20b25ea8 250 Gene3D G3DSA:3.40.50.720 1 249 3.7E-79 T 12-10-2018 JDM601_3599 fb5ae8c2ac0a2da2c691ce1e20b25ea8 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 210 230 7.8E-39 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3599 fb5ae8c2ac0a2da2c691ce1e20b25ea8 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 7.8E-39 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3599 fb5ae8c2ac0a2da2c691ce1e20b25ea8 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 7.8E-39 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3599 fb5ae8c2ac0a2da2c691ce1e20b25ea8 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 7.8E-39 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3599 fb5ae8c2ac0a2da2c691ce1e20b25ea8 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 7.8E-39 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3599 fb5ae8c2ac0a2da2c691ce1e20b25ea8 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 7.8E-39 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3599 fb5ae8c2ac0a2da2c691ce1e20b25ea8 250 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 245 2.4E-64 T 12-10-2018 JDM601_3599 fb5ae8c2ac0a2da2c691ce1e20b25ea8 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 7.4E-9 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3599 fb5ae8c2ac0a2da2c691ce1e20b25ea8 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 7.4E-9 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3599 fb5ae8c2ac0a2da2c691ce1e20b25ea8 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 7.4E-9 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3599 fb5ae8c2ac0a2da2c691ce1e20b25ea8 250 SUPERFAMILY SSF51735 5 248 8.11E-81 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_4270 49a6bfb9290b5a96e9ce662a8857c9bb 394 SUPERFAMILY SSF50022 22 137 4.84E-33 T 12-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 JDM601_4270 49a6bfb9290b5a96e9ce662a8857c9bb 394 Gene3D G3DSA:2.102.10.10 26 160 9.3E-47 T 12-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 JDM601_4270 49a6bfb9290b5a96e9ce662a8857c9bb 394 Gene3D G3DSA:3.30.530.90 161 385 1.4E-94 T 12-10-2018 JDM601_4270 49a6bfb9290b5a96e9ce662a8857c9bb 394 Pfam PF00355 Rieske [2Fe-2S] domain 31 115 1.4E-17 T 12-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 JDM601_4270 49a6bfb9290b5a96e9ce662a8857c9bb 394 SUPERFAMILY SSF55961 129 370 4.12E-32 T 12-10-2018 JDM601_0928 1807e916edeff2688c9e7272eb549be0 531 SUPERFAMILY SSF52096 232 512 6.01E-74 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily JDM601_0928 1807e916edeff2688c9e7272eb549be0 531 Gene3D G3DSA:3.90.226.10 269 531 3.9E-87 T 12-10-2018 JDM601_0928 1807e916edeff2688c9e7272eb549be0 531 SUPERFAMILY SSF52096 23 263 5.89E-65 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily JDM601_0928 1807e916edeff2688c9e7272eb549be0 531 Gene3D G3DSA:3.90.226.10 1 267 4.1E-84 T 12-10-2018 JDM601_0928 1807e916edeff2688c9e7272eb549be0 531 Pfam PF01039 Carboxyl transferase domain 48 520 2.7E-140 T 12-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 JDM601_2441 8fd42ee94df70fd032c2317cec4250d7 100 Pfam PF13834 Domain of unknown function (DUF4193) 1 99 2.9E-45 T 12-10-2018 IPR025242 Protein of unknown function DUF4193 JDM601_4051 8d4f94ba1798b9ff8fdb373b7f739cae 137 Gene3D G3DSA:3.30.530.20 1 135 2.1E-24 T 12-10-2018 IPR023393 START-like domain superfamily JDM601_4051 8d4f94ba1798b9ff8fdb373b7f739cae 137 SUPERFAMILY SSF55961 5 126 1.33E-24 T 12-10-2018 JDM601_4051 8d4f94ba1798b9ff8fdb373b7f739cae 137 Pfam PF10604 Polyketide cyclase / dehydrase and lipid transport 2 133 3.5E-23 T 12-10-2018 IPR019587 Polyketide cyclase/dehydrase JDM601_0818 be19db47775d1f569c16895b1c8b6068 157 Gene3D G3DSA:3.40.1520.20 40 148 2.2E-37 T 12-10-2018 JDM601_0818 be19db47775d1f569c16895b1c8b6068 157 Pfam PF04972 BON domain 44 84 0.0045 T 12-10-2018 IPR007055 BON domain JDM601_3031 37a20e0d181142600526463ab91ceeb2 389 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 133 145 - T 12-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 JDM601_3031 37a20e0d181142600526463ab91ceeb2 389 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 346 365 - T 12-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 JDM601_3031 37a20e0d181142600526463ab91ceeb2 389 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 131 226 5.0E-29 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 JDM601_3031 37a20e0d181142600526463ab91ceeb2 389 Gene3D G3DSA:1.10.540.10 18 129 1.1E-40 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 JDM601_3031 37a20e0d181142600526463ab91ceeb2 389 SUPERFAMILY SSF56645 13 250 1.57E-77 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 JDM601_3031 37a20e0d181142600526463ab91ceeb2 389 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 238 387 2.0E-49 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 JDM601_3031 37a20e0d181142600526463ab91ceeb2 389 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 17 127 4.8E-31 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 JDM601_3031 37a20e0d181142600526463ab91ceeb2 389 SUPERFAMILY SSF47203 236 389 2.42E-58 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 JDM601_3031 37a20e0d181142600526463ab91ceeb2 389 Gene3D G3DSA:2.40.110.10 130 242 1.4E-40 T 12-10-2018 JDM601_3031 37a20e0d181142600526463ab91ceeb2 389 Gene3D G3DSA:1.20.140.10 243 389 1.9E-56 T 12-10-2018 JDM601_3031 37a20e0d181142600526463ab91ceeb2 389 PIRSF PIRSF016578 11 389 1.5E-24 T 12-10-2018 JDM601_1860 38ca3f62b3a41499b936183eb42facd0 250 Gene3D G3DSA:3.40.50.300 1 249 1.9E-80 T 12-10-2018 JDM601_1860 38ca3f62b3a41499b936183eb42facd0 250 SUPERFAMILY SSF52540 3 248 6.02E-64 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_1860 38ca3f62b3a41499b936183eb42facd0 250 Pfam PF13614 AAA domain 1 173 1.0E-57 T 12-10-2018 IPR025669 AAA domain JDM601_2889 b82d0345f627ca9a86348b4b8ab271a6 134 Pfam PF01850 PIN domain 8 125 2.3E-13 T 12-10-2018 IPR002716 PIN domain JDM601_2889 b82d0345f627ca9a86348b4b8ab271a6 134 Gene3D G3DSA:3.40.50.1010 3 134 1.6E-15 T 12-10-2018 JDM601_2889 b82d0345f627ca9a86348b4b8ab271a6 134 SUPERFAMILY SSF88723 8 132 5.89E-22 T 12-10-2018 IPR029060 PIN-like domain superfamily JDM601_0542 ce431f88dc2e194ef14d7a9d1224fe8a 522 SUPERFAMILY SSF56801 3 515 5.49E-127 T 12-10-2018 JDM601_0542 ce431f88dc2e194ef14d7a9d1224fe8a 522 Pfam PF00501 AMP-binding enzyme 9 412 1.2E-80 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 JDM601_0542 ce431f88dc2e194ef14d7a9d1224fe8a 522 Gene3D G3DSA:3.30.300.30 406 521 1.3E-28 T 12-10-2018 JDM601_0542 ce431f88dc2e194ef14d7a9d1224fe8a 522 Gene3D G3DSA:3.40.50.12780 1 405 2.3E-90 T 12-10-2018 JDM601_0542 ce431f88dc2e194ef14d7a9d1224fe8a 522 ProSitePatterns PS00455 Putative AMP-binding domain signature. 167 178 - T 12-10-2018 IPR020845 AMP-binding, conserved site JDM601_0542 ce431f88dc2e194ef14d7a9d1224fe8a 522 Pfam PF13193 AMP-binding enzyme C-terminal domain 421 503 2.0E-17 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain JDM601_1275 a03f2291d15ee6f9e9652f39dfbdad79 609 Pfam PF00005 ABC transporter 377 526 1.5E-28 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JDM601_1275 a03f2291d15ee6f9e9652f39dfbdad79 609 SUPERFAMILY SSF52540 4 252 4.44E-62 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_1275 a03f2291d15ee6f9e9652f39dfbdad79 609 Pfam PF00005 ABC transporter 25 182 3.8E-24 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JDM601_1275 a03f2291d15ee6f9e9652f39dfbdad79 609 ProSitePatterns PS00211 ABC transporters family signature. 499 513 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JDM601_1275 a03f2291d15ee6f9e9652f39dfbdad79 609 SMART SM00382 385 582 1.6E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain JDM601_1275 a03f2291d15ee6f9e9652f39dfbdad79 609 SMART SM00382 33 232 8.3E-17 T 12-10-2018 IPR003593 AAA+ ATPase domain JDM601_1275 a03f2291d15ee6f9e9652f39dfbdad79 609 Gene3D G3DSA:3.40.50.300 1 332 3.5E-93 T 12-10-2018 JDM601_1275 a03f2291d15ee6f9e9652f39dfbdad79 609 Gene3D G3DSA:3.40.50.300 347 607 2.6E-77 T 12-10-2018 JDM601_1275 a03f2291d15ee6f9e9652f39dfbdad79 609 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 578 605 0.0013 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 JDM601_1275 a03f2291d15ee6f9e9652f39dfbdad79 609 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 234 299 4.7E-16 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 JDM601_1275 a03f2291d15ee6f9e9652f39dfbdad79 609 SUPERFAMILY SSF52540 349 598 5.98E-68 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_1275 a03f2291d15ee6f9e9652f39dfbdad79 609 ProSitePatterns PS00211 ABC transporters family signature. 155 169 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JDM601_1275 a03f2291d15ee6f9e9652f39dfbdad79 609 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 232 318 5.4E-19 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 JDM601_2931 2dcc4e637d030da789a2918ba2610581 325 Gene3D G3DSA:2.60.200.40 135 307 5.0E-15 T 12-10-2018 JDM601_2931 2dcc4e637d030da789a2918ba2610581 325 Pfam PF00781 Diacylglycerol kinase catalytic domain 3 118 2.9E-24 T 12-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 JDM601_2931 2dcc4e637d030da789a2918ba2610581 325 SUPERFAMILY SSF111331 2 316 3.11E-49 T 12-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily JDM601_2931 2dcc4e637d030da789a2918ba2610581 325 Gene3D G3DSA:3.40.50.10330 1 122 1.1E-31 T 12-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 JDM601_2931 2dcc4e637d030da789a2918ba2610581 325 SMART SM00046 2 130 3.1E-19 T 12-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 JDM601_0597 aef574e05a5624529f8338ab64e189a1 1082 Gene3D G3DSA:3.40.50.10810 236 475 1.9E-54 T 12-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily JDM601_0597 aef574e05a5624529f8338ab64e189a1 1082 SMART SM00490 589 677 5.7E-13 T 12-10-2018 IPR001650 Helicase, C-terminal JDM601_0597 aef574e05a5624529f8338ab64e189a1 1082 SUPERFAMILY SSF52540 211 440 8.54E-33 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_0597 aef574e05a5624529f8338ab64e189a1 1082 Pfam PF04851 Type III restriction enzyme, res subunit 241 402 2.8E-9 T 12-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 JDM601_0597 aef574e05a5624529f8338ab64e189a1 1082 Pfam PF00271 Helicase conserved C-terminal domain 572 677 2.9E-14 T 12-10-2018 IPR001650 Helicase, C-terminal JDM601_0597 aef574e05a5624529f8338ab64e189a1 1082 SUPERFAMILY SSF52540 360 730 4.4E-38 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_0597 aef574e05a5624529f8338ab64e189a1 1082 Gene3D G3DSA:3.40.50.300 507 696 7.1E-35 T 12-10-2018 JDM601_0597 aef574e05a5624529f8338ab64e189a1 1082 SMART SM00487 234 438 6.9E-13 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain JDM601_3901 f9e14ed258c647bae27dd53dc24f2feb 394 SUPERFAMILY SSF51679 5 352 2.59E-73 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 JDM601_3901 f9e14ed258c647bae27dd53dc24f2feb 394 Pfam PF00296 Luciferase-like monooxygenase 6 318 3.9E-41 T 12-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 JDM601_3901 f9e14ed258c647bae27dd53dc24f2feb 394 Gene3D G3DSA:3.20.20.30 5 354 2.9E-78 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 JDM601_4231 ee5d58309e5e9f83defeba768074b9a3 287 SUPERFAMILY SSF51679 1 277 4.06E-57 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 JDM601_4231 ee5d58309e5e9f83defeba768074b9a3 287 Gene3D G3DSA:3.20.20.30 1 279 4.0E-66 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 JDM601_4231 ee5d58309e5e9f83defeba768074b9a3 287 TIGRFAM TIGR03619 F420_Rv2161c: probable F420-dependent oxidoreductase, Rv2161c family 31 259 5.4E-69 T 12-10-2018 IPR019921 Luciferase-like, F420-dependent oxidoreductase, Rv2161c, predicted JDM601_4231 ee5d58309e5e9f83defeba768074b9a3 287 Pfam PF00296 Luciferase-like monooxygenase 1 217 1.4E-43 T 12-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 JDM601_0181 ad066436fe8a3f38a2defbd2cc066642 387 Gene3D G3DSA:1.20.140.10 239 385 3.0E-49 T 12-10-2018 JDM601_0181 ad066436fe8a3f38a2defbd2cc066642 387 Gene3D G3DSA:2.40.110.10 120 238 2.1E-34 T 12-10-2018 JDM601_0181 ad066436fe8a3f38a2defbd2cc066642 387 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 116 1.2E-30 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 JDM601_0181 ad066436fe8a3f38a2defbd2cc066642 387 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 122 220 5.7E-26 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 JDM601_0181 ad066436fe8a3f38a2defbd2cc066642 387 Gene3D G3DSA:1.10.540.10 1 118 3.1E-35 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 JDM601_0181 ad066436fe8a3f38a2defbd2cc066642 387 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 233 381 4.9E-47 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 JDM601_0181 ad066436fe8a3f38a2defbd2cc066642 387 PIRSF PIRSF016578 5 384 2.7E-16 T 12-10-2018 JDM601_0181 ad066436fe8a3f38a2defbd2cc066642 387 SUPERFAMILY SSF47203 232 382 1.1E-52 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 JDM601_0181 ad066436fe8a3f38a2defbd2cc066642 387 SUPERFAMILY SSF56645 2 245 2.62E-70 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 JDM601_0739 fbfabd5d8587ca5e473fb5c4afa8110f 382 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 7 118 4.6E-28 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 JDM601_0739 fbfabd5d8587ca5e473fb5c4afa8110f 382 SUPERFAMILY SSF56645 4 244 1.57E-75 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 JDM601_0739 fbfabd5d8587ca5e473fb5c4afa8110f 382 Gene3D G3DSA:1.20.140.10 240 382 1.2E-42 T 12-10-2018 JDM601_0739 fbfabd5d8587ca5e473fb5c4afa8110f 382 SUPERFAMILY SSF47203 232 380 1.24E-43 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 JDM601_0739 fbfabd5d8587ca5e473fb5c4afa8110f 382 Gene3D G3DSA:2.40.110.10 122 239 9.7E-40 T 12-10-2018 JDM601_0739 fbfabd5d8587ca5e473fb5c4afa8110f 382 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 339 358 - T 12-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 JDM601_0739 fbfabd5d8587ca5e473fb5c4afa8110f 382 Gene3D G3DSA:1.10.540.10 1 120 9.3E-33 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 JDM601_0739 fbfabd5d8587ca5e473fb5c4afa8110f 382 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 235 380 2.8E-40 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 JDM601_0739 fbfabd5d8587ca5e473fb5c4afa8110f 382 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 123 220 9.3E-26 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 JDM601_0739 fbfabd5d8587ca5e473fb5c4afa8110f 382 PIRSF PIRSF016578 235 382 3.4E-9 T 12-10-2018 JDM601_0739 fbfabd5d8587ca5e473fb5c4afa8110f 382 PIRSF PIRSF016578 128 193 0.63 T 12-10-2018 JDM601_0739 fbfabd5d8587ca5e473fb5c4afa8110f 382 PIRSF PIRSF016578 5 81 0.35 T 12-10-2018 JDM601_1739 8fd40836a60539ee4001ea418eab3bc6 501 Gene3D G3DSA:3.40.1390.10 1 85 1.1E-21 T 12-10-2018 JDM601_1739 8fd40836a60539ee4001ea418eab3bc6 501 SUPERFAMILY SSF63418 1 93 3.14E-17 T 12-10-2018 IPR035911 MurE/MurF, N-terminal JDM601_1739 8fd40836a60539ee4001ea418eab3bc6 501 Gene3D G3DSA:3.90.190.20 344 499 3.0E-35 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 JDM601_1739 8fd40836a60539ee4001ea418eab3bc6 501 Gene3D G3DSA:3.40.1190.10 109 340 5.1E-63 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 JDM601_1739 8fd40836a60539ee4001ea418eab3bc6 501 Pfam PF08245 Mur ligase middle domain 135 323 3.4E-40 T 12-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 JDM601_1739 8fd40836a60539ee4001ea418eab3bc6 501 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 4 493 30.39 T 12-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 JDM601_1739 8fd40836a60539ee4001ea418eab3bc6 501 Pfam PF02875 Mur ligase family, glutamate ligase domain 346 435 7.0E-26 T 12-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 JDM601_1739 8fd40836a60539ee4001ea418eab3bc6 501 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 36 492 6.0E-129 T 12-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 JDM601_1739 8fd40836a60539ee4001ea418eab3bc6 501 Pfam PF01225 Mur ligase family, catalytic domain 34 78 8.2E-10 T 12-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 JDM601_1739 8fd40836a60539ee4001ea418eab3bc6 501 SUPERFAMILY SSF53623 130 340 7.72E-51 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 JDM601_1739 8fd40836a60539ee4001ea418eab3bc6 501 SUPERFAMILY SSF53244 345 492 4.35E-31 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 JDM601_0560 353d849ba897a303a7eee8c0f664af1d 491 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 179 204 1.6E-8 T 12-10-2018 JDM601_0560 353d849ba897a303a7eee8c0f664af1d 491 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 1.6E-8 T 12-10-2018 JDM601_0560 353d849ba897a303a7eee8c0f664af1d 491 Gene3D G3DSA:3.50.50.60 4 416 1.1E-60 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_0560 353d849ba897a303a7eee8c0f664af1d 491 SUPERFAMILY SSF51905 8 410 1.19E-53 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_0560 353d849ba897a303a7eee8c0f664af1d 491 Pfam PF00743 Flavin-binding monooxygenase-like 9 344 1.2E-15 T 12-10-2018 IPR020946 Flavin monooxygenase-like GO:0004499|GO:0050660|GO:0050661|GO:0055114 JDM601_0560 353d849ba897a303a7eee8c0f664af1d 491 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 5.3E-6 T 12-10-2018 JDM601_0560 353d849ba897a303a7eee8c0f664af1d 491 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 179 197 5.3E-6 T 12-10-2018 JDM601_1490 44042b269aef84368d15834fa8d842cf 249 SUPERFAMILY SSF52266 12 241 8.66E-16 T 12-10-2018 JDM601_1490 44042b269aef84368d15834fa8d842cf 249 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 20 230 1.4E-8 T 12-10-2018 IPR013830 SGNH hydrolase-type esterase domain JDM601_3983 05e5e0bf9639d8822ff9bca1bc008142 434 Pfam PF12867 DinB superfamily 19 146 1.1E-18 T 12-10-2018 IPR024775 DinB-like domain JDM601_3983 05e5e0bf9639d8822ff9bca1bc008142 434 TIGRFAM TIGR03440 egtB_TIGR03440: ergothioneine biosynthesis protein EgtB 16 431 1.8E-130 T 12-10-2018 IPR017806 Ergothioneine biosynthesis protein EgtB GO:0052699 KEGG: 00340+1.14.99.50|MetaCyc: PWY-7255 JDM601_3983 05e5e0bf9639d8822ff9bca1bc008142 434 SUPERFAMILY SSF109854 12 143 6.41E-16 T 12-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes JDM601_3983 05e5e0bf9639d8822ff9bca1bc008142 434 Hamap MF_02035 Hercynine oxygenase [egtB]. 1 434 47.962 T 12-10-2018 IPR032890 Hercynine oxygenase, Actinobacteria GO:0016491|GO:0052699 KEGG: 00340+1.14.99.50|MetaCyc: PWY-7255 JDM601_3983 05e5e0bf9639d8822ff9bca1bc008142 434 Pfam PF03781 Sulfatase-modifying factor enzyme 1 175 431 2.3E-59 T 12-10-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 JDM601_3983 05e5e0bf9639d8822ff9bca1bc008142 434 Gene3D G3DSA:3.90.1580.10 163 434 1.3E-55 T 12-10-2018 JDM601_3983 05e5e0bf9639d8822ff9bca1bc008142 434 SUPERFAMILY SSF56436 177 433 3.39E-72 T 12-10-2018 IPR016187 C-type lectin fold JDM601_2926 1f1e10ac4adeab536fe97ff95552a13b 508 SMART SM00490 278 359 1.4E-34 T 12-10-2018 IPR001650 Helicase, C-terminal JDM601_2926 1f1e10ac4adeab536fe97ff95552a13b 508 Gene3D G3DSA:3.40.50.300 237 406 4.4E-49 T 12-10-2018 JDM601_2926 1f1e10ac4adeab536fe97ff95552a13b 508 Pfam PF00271 Helicase conserved C-terminal domain 252 359 2.0E-29 T 12-10-2018 IPR001650 Helicase, C-terminal JDM601_2926 1f1e10ac4adeab536fe97ff95552a13b 508 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 171 179 - T 12-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site JDM601_2926 1f1e10ac4adeab536fe97ff95552a13b 508 Pfam PF00270 DEAD/DEAH box helicase 39 208 2.3E-45 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 JDM601_2926 1f1e10ac4adeab536fe97ff95552a13b 508 Gene3D G3DSA:3.40.50.300 15 228 8.3E-67 T 12-10-2018 JDM601_2926 1f1e10ac4adeab536fe97ff95552a13b 508 SMART SM00487 33 242 2.8E-47 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain JDM601_2926 1f1e10ac4adeab536fe97ff95552a13b 508 SUPERFAMILY SSF52540 88 376 9.58E-72 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_1309 8a6b3974252164ed4d1030597b4944ec 457 Gene3D G3DSA:1.10.1140.10 338 456 6.2E-49 T 12-10-2018 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 JDM601_1309 8a6b3974252164ed4d1030597b4944ec 457 SUPERFAMILY SSF50615 1 66 1.02E-18 T 12-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 JDM601_1309 8a6b3974252164ed4d1030597b4944ec 457 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 326 335 - T 12-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 JDM601_1309 8a6b3974252164ed4d1030597b4944ec 457 Gene3D G3DSA:3.40.50.300 68 337 1.0E-100 T 12-10-2018 JDM601_1309 8a6b3974252164ed4d1030597b4944ec 457 Gene3D G3DSA:2.40.10.170 1 67 1.5E-21 T 12-10-2018 JDM601_1309 8a6b3974252164ed4d1030597b4944ec 457 Hamap MF_01347 ATP synthase subunit beta [atpB]. 1 453 51.661 T 12-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 JDM601_1309 8a6b3974252164ed4d1030597b4944ec 457 SUPERFAMILY SSF47917 338 453 4.45E-47 T 12-10-2018 JDM601_1309 8a6b3974252164ed4d1030597b4944ec 457 SUPERFAMILY SSF52540 69 341 2.48E-84 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_1309 8a6b3974252164ed4d1030597b4944ec 457 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 122 335 5.0E-62 T 12-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 JDM601_1309 8a6b3974252164ed4d1030597b4944ec 457 SMART SM00382 134 319 6.4E-7 T 12-10-2018 IPR003593 AAA+ ATPase domain JDM601_1309 8a6b3974252164ed4d1030597b4944ec 457 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 1 453 4.6E-241 T 12-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 JDM601_1309 8a6b3974252164ed4d1030597b4944ec 457 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 1 65 9.7E-19 T 12-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 JDM601_3317 b028a9dfb19cc771decece27658a252e 179 Gene3D G3DSA:3.90.930.12 1 83 5.3E-30 T 12-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JDM601_3317 b028a9dfb19cc771decece27658a252e 179 PRINTS PR00059 Ribosomal protein L6 signature 142 163 3.2E-31 T 12-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 JDM601_3317 b028a9dfb19cc771decece27658a252e 179 PRINTS PR00059 Ribosomal protein L6 signature 72 97 3.2E-31 T 12-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 JDM601_3317 b028a9dfb19cc771decece27658a252e 179 PRINTS PR00059 Ribosomal protein L6 signature 100 116 3.2E-31 T 12-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 JDM601_3317 b028a9dfb19cc771decece27658a252e 179 SUPERFAMILY SSF56053 84 178 1.96E-34 T 12-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JDM601_3317 b028a9dfb19cc771decece27658a252e 179 SUPERFAMILY SSF56053 1 83 4.97E-25 T 12-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JDM601_3317 b028a9dfb19cc771decece27658a252e 179 Pfam PF00347 Ribosomal protein L6 91 165 3.8E-20 T 12-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JDM601_3317 b028a9dfb19cc771decece27658a252e 179 Pfam PF00347 Ribosomal protein L6 11 83 1.4E-18 T 12-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JDM601_3317 b028a9dfb19cc771decece27658a252e 179 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 177 38.175 T 12-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 JDM601_3317 b028a9dfb19cc771decece27658a252e 179 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 155 163 - T 12-10-2018 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 JDM601_3317 b028a9dfb19cc771decece27658a252e 179 PIRSF PIRSF002162 1 178 5.9E-47 T 12-10-2018 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JDM601_3317 b028a9dfb19cc771decece27658a252e 179 Gene3D G3DSA:3.90.930.12 84 179 1.1E-38 T 12-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JDM601_3317 b028a9dfb19cc771decece27658a252e 179 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 177 6.3E-72 T 12-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 JDM601_3589 fb00e7de5fab3920668b028996d2bf8b 508 ProSitePatterns PS00837 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 2. 167 192 - T 12-10-2018 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 GO:0016491|GO:0055114 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|Reactome: R-HSA-71403 JDM601_3589 fb00e7de5fab3920668b028996d2bf8b 508 SMART SM01003 4 134 1.1E-60 T 12-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal JDM601_3589 fb00e7de5fab3920668b028996d2bf8b 508 PIRSF PIRSF000203 1 507 1.9E-225 T 12-10-2018 IPR026255 NAD(P) transhydrogenase, alpha subunit GO:0008746|GO:0055114|GO:1902600 KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 JDM601_3589 fb00e7de5fab3920668b028996d2bf8b 508 Gene3D G3DSA:3.40.50.720 134 315 6.6E-143 T 12-10-2018 JDM601_3589 fb00e7de5fab3920668b028996d2bf8b 508 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 138 365 3.6E-68 T 12-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain JDM601_3589 fb00e7de5fab3920668b028996d2bf8b 508 Pfam PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch 424 507 7.9E-33 T 12-10-2018 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 JDM601_3589 fb00e7de5fab3920668b028996d2bf8b 508 TIGRFAM TIGR00561 pntA: NAD(P)(+) transhydrogenase (AB-specific), alpha subunit 3 507 4.1E-214 T 12-10-2018 IPR026255 NAD(P) transhydrogenase, alpha subunit GO:0008746|GO:0055114|GO:1902600 KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 JDM601_3589 fb00e7de5fab3920668b028996d2bf8b 508 SUPERFAMILY SSF51735 134 301 1.93E-34 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_3589 fb00e7de5fab3920668b028996d2bf8b 508 SUPERFAMILY SSF52283 1 165 6.38E-50 T 12-10-2018 JDM601_3589 fb00e7de5fab3920668b028996d2bf8b 508 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 134 9.4E-43 T 12-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal JDM601_3589 fb00e7de5fab3920668b028996d2bf8b 508 SMART SM01002 143 308 7.7E-73 T 12-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain JDM601_3589 fb00e7de5fab3920668b028996d2bf8b 508 Gene3D G3DSA:3.40.50.720 3 362 6.6E-143 T 12-10-2018 JDM601_1711 8ae3b526718220583c321892e63287a9 633 Pfam PF00929 Exonuclease 34 206 2.6E-33 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III JDM601_1711 8ae3b526718220583c321892e63287a9 633 SUPERFAMILY SSF53098 28 224 6.4E-52 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily JDM601_1711 8ae3b526718220583c321892e63287a9 633 SMART SM00465 248 329 1.2E-9 T 12-10-2018 IPR000305 GIY-YIG endonuclease JDM601_1711 8ae3b526718220583c321892e63287a9 633 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 27 217 1.5E-23 T 12-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 JDM601_1711 8ae3b526718220583c321892e63287a9 633 Gene3D G3DSA:3.30.420.10 26 217 3.7E-47 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 JDM601_1711 8ae3b526718220583c321892e63287a9 633 SMART SM00479 32 215 1.2E-48 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III JDM601_1711 8ae3b526718220583c321892e63287a9 633 SUPERFAMILY SSF82771 248 326 4.71E-13 T 12-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 JDM601_1711 8ae3b526718220583c321892e63287a9 633 Gene3D G3DSA:3.40.1440.10 235 333 6.0E-20 T 12-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 JDM601_0374 83ff75131e788a7fe8ee369fe3d87d60 371 Gene3D G3DSA:3.40.720.10 28 365 2.0E-35 T 12-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 JDM601_0374 83ff75131e788a7fe8ee369fe3d87d60 371 SUPERFAMILY SSF53649 35 369 1.37E-49 T 12-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 JDM601_0374 83ff75131e788a7fe8ee369fe3d87d60 371 Pfam PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase 37 357 2.2E-32 T 12-10-2018 IPR002591 Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase GO:0003824 JDM601_2364 080ce0134c7263f81e67d78fa7f8de35 187 Gene3D G3DSA:1.10.260.40 8 73 4.4E-20 T 12-10-2018 JDM601_2364 080ce0134c7263f81e67d78fa7f8de35 187 Pfam PF01381 Helix-turn-helix 15 68 3.1E-17 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 JDM601_2364 080ce0134c7263f81e67d78fa7f8de35 187 Pfam PF07883 Cupin domain 119 179 3.6E-15 T 12-10-2018 IPR013096 Cupin 2, conserved barrel JDM601_2364 080ce0134c7263f81e67d78fa7f8de35 187 SUPERFAMILY SSF51182 62 184 1.15E-24 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily JDM601_2364 080ce0134c7263f81e67d78fa7f8de35 187 SMART SM00530 14 69 1.9E-17 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 JDM601_2364 080ce0134c7263f81e67d78fa7f8de35 187 Gene3D G3DSA:2.60.120.10 74 180 4.4E-24 T 12-10-2018 IPR014710 RmlC-like jelly roll fold JDM601_2364 080ce0134c7263f81e67d78fa7f8de35 187 SUPERFAMILY SSF47413 7 76 9.12E-19 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 JDM601_1627 77d7bc87f2c6667ec57df75081429108 779 Pfam PF12836 Helix-hairpin-helix motif 495 559 3.3E-27 T 12-10-2018 JDM601_1627 77d7bc87f2c6667ec57df75081429108 779 SUPERFAMILY SSF53098 322 473 2.43E-47 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily JDM601_1627 77d7bc87f2c6667ec57df75081429108 779 Gene3D G3DSA:2.40.50.140 635 729 9.2E-27 T 12-10-2018 JDM601_1627 77d7bc87f2c6667ec57df75081429108 779 SUPERFAMILY SSF50249 643 726 5.82E-23 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold JDM601_1627 77d7bc87f2c6667ec57df75081429108 779 SMART SM00316 653 724 4.3E-23 T 12-10-2018 IPR022967 RNA-binding domain, S1 JDM601_1627 77d7bc87f2c6667ec57df75081429108 779 Pfam PF09371 Tex-like protein N-terminal domain 14 193 4.5E-66 T 12-10-2018 IPR018974 Tex-like protein, N-terminal JDM601_1627 77d7bc87f2c6667ec57df75081429108 779 SMART SM00732 326 428 2.1E-32 T 12-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 JDM601_1627 77d7bc87f2c6667ec57df75081429108 779 Gene3D G3DSA:1.10.150.310 503 634 3.6E-47 T 12-10-2018 JDM601_1627 77d7bc87f2c6667ec57df75081429108 779 Gene3D G3DSA:1.10.10.650 7 114 9.7E-40 T 12-10-2018 IPR023319 Tex-like protein, HTH domain superfamily JDM601_1627 77d7bc87f2c6667ec57df75081429108 779 Pfam PF00575 S1 RNA binding domain 652 724 1.6E-19 T 12-10-2018 IPR003029 S1 domain GO:0003676 JDM601_1627 77d7bc87f2c6667ec57df75081429108 779 Pfam PF16921 Tex protein YqgF-like domain 327 455 2.5E-49 T 12-10-2018 IPR032639 Tex protein, YqgF-like domain JDM601_1627 77d7bc87f2c6667ec57df75081429108 779 SUPERFAMILY SSF47781 564 635 2.89E-19 T 12-10-2018 IPR010994 RuvA domain 2-like JDM601_1627 77d7bc87f2c6667ec57df75081429108 779 SUPERFAMILY SSF47781 474 562 3.34E-26 T 12-10-2018 IPR010994 RuvA domain 2-like JDM601_1627 77d7bc87f2c6667ec57df75081429108 779 Gene3D G3DSA:3.30.420.140 325 455 2.6E-135 T 12-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 JDM601_1627 77d7bc87f2c6667ec57df75081429108 779 Gene3D G3DSA:1.10.3500.10 117 502 2.6E-135 T 12-10-2018 IPR023323 Tex-like domain superfamily JDM601_1627 77d7bc87f2c6667ec57df75081429108 779 SUPERFAMILY SSF158832 9 321 4.84E-103 T 12-10-2018 JDM601_3986 985bacca7affdcd8e8708aadd313254b 143 SUPERFAMILY SSF82784 4 138 1.96E-32 T 12-10-2018 IPR036102 OsmC/Ohr superfamily JDM601_3986 985bacca7affdcd8e8708aadd313254b 143 Pfam PF02566 OsmC-like protein 41 137 6.5E-15 T 12-10-2018 IPR003718 OsmC/Ohr family JDM601_3986 985bacca7affdcd8e8708aadd313254b 143 TIGRFAM TIGR03561 organ_hyd_perox: peroxiredoxin, Ohr subfamily 7 137 1.2E-42 T 12-10-2018 IPR019953 Organic hydroperoxide resistance protein famiy GO:0006979 JDM601_3986 985bacca7affdcd8e8708aadd313254b 143 Gene3D G3DSA:2.20.25.10 1 46 8.1E-14 T 12-10-2018 JDM601_3986 985bacca7affdcd8e8708aadd313254b 143 Gene3D G3DSA:3.30.300.20 47 141 1.3E-26 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta JDM601_1702 9286ab9d436b175e6d3732b62f0f3c89 331 SUPERFAMILY SSF81464 6 109 2.45E-16 T 12-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 JDM601_1702 9286ab9d436b175e6d3732b62f0f3c89 331 Gene3D G3DSA:2.60.40.420 116 292 4.8E-40 T 12-10-2018 IPR008972 Cupredoxin JDM601_1702 9286ab9d436b175e6d3732b62f0f3c89 331 Gene3D G3DSA:1.10.287.90 30 108 5.3E-10 T 12-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 JDM601_1702 9286ab9d436b175e6d3732b62f0f3c89 331 ProSitePatterns PS00078 CO II and nitrous oxide reductase dinuclear copper centers signature. 219 273 - T 12-10-2018 IPR001505 Copper centre Cu(A) GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 JDM601_1702 9286ab9d436b175e6d3732b62f0f3c89 331 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 201 279 2.2E-15 T 12-10-2018 IPR002429 Cytochrome c oxidase subunit II-like C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 JDM601_1702 9286ab9d436b175e6d3732b62f0f3c89 331 SUPERFAMILY SSF49503 113 298 7.93E-36 T 12-10-2018 IPR008972 Cupredoxin JDM601_2718 501be23c179990c92cbde883c96e992d 524 Gene3D G3DSA:3.40.50.720 94 275 4.2E-124 T 12-10-2018 JDM601_2718 501be23c179990c92cbde883c96e992d 524 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 217 233 - T 12-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site JDM601_2718 501be23c179990c92cbde883c96e992d 524 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 140 167 - T 12-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 JDM601_2718 501be23c179990c92cbde883c96e992d 524 SUPERFAMILY SSF55021 449 514 2.79E-12 T 12-10-2018 JDM601_2718 501be23c179990c92cbde883c96e992d 524 TIGRFAM TIGR01327 PGDH: phosphoglycerate dehydrogenase 2 523 1.7E-197 T 12-10-2018 IPR006236 D-3-phosphoglycerate dehydrogenase GO:0004617|GO:0006564 KEGG: 00260+1.1.1.95|KEGG: 00680+1.1.1.95|Reactome: R-HSA-977347 JDM601_2718 501be23c179990c92cbde883c96e992d 524 SUPERFAMILY SSF52283 2 130 6.05E-36 T 12-10-2018 JDM601_2718 501be23c179990c92cbde883c96e992d 524 Gene3D G3DSA:3.30.1330.90 311 449 1.7E-46 T 12-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 JDM601_2718 501be23c179990c92cbde883c96e992d 524 Pfam PF01842 ACT domain 452 511 5.2E-7 T 12-10-2018 IPR002912 ACT domain JDM601_2718 501be23c179990c92cbde883c96e992d 524 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 188 210 - T 12-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site JDM601_2718 501be23c179990c92cbde883c96e992d 524 SUPERFAMILY SSF51735 96 277 1.8E-59 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_2718 501be23c179990c92cbde883c96e992d 524 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 2 309 1.4E-35 T 12-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 JDM601_2718 501be23c179990c92cbde883c96e992d 524 Gene3D G3DSA:3.40.50.720 3 301 4.2E-124 T 12-10-2018 JDM601_2718 501be23c179990c92cbde883c96e992d 524 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 103 277 1.6E-61 T 12-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 JDM601_2718 501be23c179990c92cbde883c96e992d 524 Gene3D G3DSA:3.30.70.260 450 524 5.3E-27 T 12-10-2018 JDM601_2718 501be23c179990c92cbde883c96e992d 524 SUPERFAMILY SSF143548 315 445 1.15E-31 T 12-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 JDM601_2115 5796c950a8bb6d0948b4d4d62d2d8dd4 278 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 3 235 3.3E-74 T 12-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 JDM601_2115 5796c950a8bb6d0948b4d4d62d2d8dd4 278 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 1 248 15.127 T 12-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 JDM601_2115 5796c950a8bb6d0948b4d4d62d2d8dd4 278 ProSitePatterns PS01218 TatC family signature. 163 182 - T 12-10-2018 IPR019820 Sec-independent periplasmic protein translocase, conserved site JDM601_2115 5796c950a8bb6d0948b4d4d62d2d8dd4 278 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 163 191 2.3E-41 T 12-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 JDM601_2115 5796c950a8bb6d0948b4d4d62d2d8dd4 278 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 113 139 2.3E-41 T 12-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 JDM601_2115 5796c950a8bb6d0948b4d4d62d2d8dd4 278 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 2 29 2.3E-41 T 12-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 JDM601_2115 5796c950a8bb6d0948b4d4d62d2d8dd4 278 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 95 113 2.3E-41 T 12-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 JDM601_2115 5796c950a8bb6d0948b4d4d62d2d8dd4 278 Pfam PF00902 Sec-independent protein translocase protein (TatC) 5 228 7.2E-61 T 12-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 JDM601_0805 1640041091784fff8dd5739ede0388b1 152 Gene3D G3DSA:3.30.530.20 6 152 2.0E-41 T 12-10-2018 IPR023393 START-like domain superfamily JDM601_0805 1640041091784fff8dd5739ede0388b1 152 SUPERFAMILY SSF55961 7 151 5.16E-25 T 12-10-2018 JDM601_0805 1640041091784fff8dd5739ede0388b1 152 Pfam PF10604 Polyketide cyclase / dehydrase and lipid transport 7 150 3.1E-19 T 12-10-2018 IPR019587 Polyketide cyclase/dehydrase JDM601_4185 681e75f0f38001e6d7b206cff6b211f4 714 Gene3D G3DSA:2.40.30.10 307 421 2.4E-22 T 12-10-2018 JDM601_4185 681e75f0f38001e6d7b206cff6b211f4 714 Pfam PF00009 Elongation factor Tu GTP binding domain 28 284 2.1E-32 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JDM601_4185 681e75f0f38001e6d7b206cff6b211f4 714 SUPERFAMILY SSF54980 619 703 1.4E-22 T 12-10-2018 IPR035647 EF-G domain III/V-like JDM601_4185 681e75f0f38001e6d7b206cff6b211f4 714 Pfam PF00679 Elongation factor G C-terminus 619 703 2.2E-23 T 12-10-2018 IPR000640 Elongation factor EFG, domain V-like JDM601_4185 681e75f0f38001e6d7b206cff6b211f4 714 SMART SM00838 619 707 1.5E-22 T 12-10-2018 IPR000640 Elongation factor EFG, domain V-like JDM601_4185 681e75f0f38001e6d7b206cff6b211f4 714 SUPERFAMILY SSF50447 268 417 1.03E-20 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily JDM601_4185 681e75f0f38001e6d7b206cff6b211f4 714 Gene3D G3DSA:3.30.70.870 422 493 2.0E-14 T 12-10-2018 JDM601_4185 681e75f0f38001e6d7b206cff6b211f4 714 Gene3D G3DSA:3.40.50.300 19 289 4.6E-49 T 12-10-2018 JDM601_4185 681e75f0f38001e6d7b206cff6b211f4 714 SMART SM00382 27 150 5.5E-4 T 12-10-2018 IPR003593 AAA+ ATPase domain JDM601_4185 681e75f0f38001e6d7b206cff6b211f4 714 SUPERFAMILY SSF52540 25 284 1.87E-51 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_4185 681e75f0f38001e6d7b206cff6b211f4 714 SUPERFAMILY SSF54211 495 614 2.2E-32 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold JDM601_4185 681e75f0f38001e6d7b206cff6b211f4 714 Pfam PF14492 Elongation Factor G, domain II 421 491 1.8E-18 T 12-10-2018 JDM601_4185 681e75f0f38001e6d7b206cff6b211f4 714 Gene3D G3DSA:3.30.70.240 623 694 1.5E-75 T 12-10-2018 JDM601_4185 681e75f0f38001e6d7b206cff6b211f4 714 Gene3D G3DSA:3.30.230.10 499 703 1.5E-75 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup JDM601_4185 681e75f0f38001e6d7b206cff6b211f4 714 SUPERFAMILY SSF54980 420 490 2.16E-13 T 12-10-2018 IPR035647 EF-G domain III/V-like JDM601_4185 681e75f0f38001e6d7b206cff6b211f4 714 Pfam PF03144 Elongation factor Tu domain 2 327 407 1.4E-7 T 12-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 JDM601_4185 681e75f0f38001e6d7b206cff6b211f4 714 SMART SM00889 495 617 2.6E-54 T 12-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 JDM601_4185 681e75f0f38001e6d7b206cff6b211f4 714 Pfam PF03764 Elongation factor G, domain IV 495 615 1.3E-35 T 12-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 JDM601_1850 258b52e1f0753e385d666963a4f987ea 268 SUPERFAMILY SSF53335 61 244 1.49E-21 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JDM601_1850 258b52e1f0753e385d666963a4f987ea 268 Gene3D G3DSA:3.40.50.150 65 267 6.1E-73 T 12-10-2018 JDM601_1850 258b52e1f0753e385d666963a4f987ea 268 Gene3D G3DSA:3.10.290.10 1 64 1.1E-13 T 12-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 JDM601_1850 258b52e1f0753e385d666963a4f987ea 268 Pfam PF01479 S4 domain 6 47 1.1E-7 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JDM601_1850 258b52e1f0753e385d666963a4f987ea 268 TIGRFAM TIGR00478 tly: TlyA family rRNA methyltransferase/putative hemolysin 6 238 2.0E-63 T 12-10-2018 IPR004538 Haemolysin A /rRNA methyltransferase TlyA GO:0003723 JDM601_1850 258b52e1f0753e385d666963a4f987ea 268 Pfam PF01728 FtsJ-like methyltransferase 62 243 4.5E-21 T 12-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 JDM601_1850 258b52e1f0753e385d666963a4f987ea 268 PIRSF PIRSF005578 1 265 2.9E-93 T 12-10-2018 IPR004538 Haemolysin A /rRNA methyltransferase TlyA GO:0003723 JDM601_1850 258b52e1f0753e385d666963a4f987ea 268 SUPERFAMILY SSF55174 4 58 5.89E-9 T 12-10-2018 JDM601_1850 258b52e1f0753e385d666963a4f987ea 268 SMART SM00363 5 71 1.7E-6 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JDM601_2945 2b0bbdd3b2aea0727c0683d722f238eb 217 SUPERFAMILY SSF100950 3 210 1.13E-72 T 12-10-2018 IPR037171 NagB/RpiA transferase-like JDM601_2945 2b0bbdd3b2aea0727c0683d722f238eb 217 SMART SM00882 6 202 2.5E-73 T 12-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 JDM601_2945 2b0bbdd3b2aea0727c0683d722f238eb 217 Pfam PF01144 Coenzyme A transferase 7 201 1.4E-42 T 12-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 JDM601_2945 2b0bbdd3b2aea0727c0683d722f238eb 217 Gene3D G3DSA:3.40.1080.10 2 211 7.5E-97 T 12-10-2018 JDM601_2945 2b0bbdd3b2aea0727c0683d722f238eb 217 TIGRFAM TIGR02428 pcaJ_scoB_fam: 3-oxoacid CoA-transferase, B subunit 3 206 1.1E-96 T 12-10-2018 IPR012791 3-oxoacid CoA-transferase, subunit B GO:0008410 Reactome: R-HSA-77108 JDM601_0745 c6b8cb5f6b9bd7f26bb1422b8cd53c76 492 Pfam PF13193 AMP-binding enzyme C-terminal domain 407 482 3.9E-21 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain JDM601_0745 c6b8cb5f6b9bd7f26bb1422b8cd53c76 492 Gene3D G3DSA:3.40.50.12780 2 395 1.9E-83 T 12-10-2018 JDM601_0745 c6b8cb5f6b9bd7f26bb1422b8cd53c76 492 Pfam PF00501 AMP-binding enzyme 9 398 1.1E-68 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 JDM601_0745 c6b8cb5f6b9bd7f26bb1422b8cd53c76 492 Gene3D G3DSA:3.30.300.310 396 492 2.4E-32 T 12-10-2018 JDM601_0745 c6b8cb5f6b9bd7f26bb1422b8cd53c76 492 ProSitePatterns PS00455 Putative AMP-binding domain signature. 144 155 - T 12-10-2018 IPR020845 AMP-binding, conserved site JDM601_0745 c6b8cb5f6b9bd7f26bb1422b8cd53c76 492 SUPERFAMILY SSF56801 6 490 7.06E-124 T 12-10-2018 JDM601_2706 4eba81ff6f33d6e3ac39e2ae4b5f47a5 227 SMART SM00345 21 79 2.1E-20 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 JDM601_2706 4eba81ff6f33d6e3ac39e2ae4b5f47a5 227 SMART SM00895 89 213 1.7E-14 T 12-10-2018 IPR011711 GntR, C-terminal JDM601_2706 4eba81ff6f33d6e3ac39e2ae4b5f47a5 227 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 39 53 2.8E-5 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 JDM601_2706 4eba81ff6f33d6e3ac39e2ae4b5f47a5 227 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 53 69 2.8E-5 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 JDM601_2706 4eba81ff6f33d6e3ac39e2ae4b5f47a5 227 Pfam PF07729 FCD domain 89 212 1.1E-19 T 12-10-2018 IPR011711 GntR, C-terminal JDM601_2706 4eba81ff6f33d6e3ac39e2ae4b5f47a5 227 Gene3D G3DSA:1.20.120.530 83 224 2.0E-27 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal JDM601_2706 4eba81ff6f33d6e3ac39e2ae4b5f47a5 227 Pfam PF00392 Bacterial regulatory proteins, gntR family 21 79 1.3E-20 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 JDM601_2706 4eba81ff6f33d6e3ac39e2ae4b5f47a5 227 SUPERFAMILY SSF46785 11 83 3.38E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JDM601_2706 4eba81ff6f33d6e3ac39e2ae4b5f47a5 227 SUPERFAMILY SSF48008 85 220 4.71E-26 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal JDM601_2706 4eba81ff6f33d6e3ac39e2ae4b5f47a5 227 Gene3D G3DSA:1.10.10.10 9 79 1.5E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JDM601_0892 f61ada8f7dfb51bb7ef23062acc064de 555 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 269 282 - T 12-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 JDM601_0892 f61ada8f7dfb51bb7ef23062acc064de 555 SUPERFAMILY SSF53697 11 551 5.0E-201 T 12-10-2018 JDM601_0892 f61ada8f7dfb51bb7ef23062acc064de 555 Gene3D G3DSA:1.10.1390.10 513 555 3.5E-24 T 12-10-2018 IPR023096 Phosphoglucose isomerase, C-terminal GO:0004347|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 JDM601_0892 f61ada8f7dfb51bb7ef23062acc064de 555 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 50 526 40.882 T 12-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 JDM601_0892 f61ada8f7dfb51bb7ef23062acc064de 555 PRINTS PR00662 Glucose-6-phosphate isomerase signature 485 499 1.3E-54 T 12-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 JDM601_0892 f61ada8f7dfb51bb7ef23062acc064de 555 PRINTS PR00662 Glucose-6-phosphate isomerase signature 499 512 1.3E-54 T 12-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 JDM601_0892 f61ada8f7dfb51bb7ef23062acc064de 555 PRINTS PR00662 Glucose-6-phosphate isomerase signature 342 363 1.3E-54 T 12-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 JDM601_0892 f61ada8f7dfb51bb7ef23062acc064de 555 PRINTS PR00662 Glucose-6-phosphate isomerase signature 265 283 1.3E-54 T 12-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 JDM601_0892 f61ada8f7dfb51bb7ef23062acc064de 555 PRINTS PR00662 Glucose-6-phosphate isomerase signature 154 173 1.3E-54 T 12-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 JDM601_0892 f61ada8f7dfb51bb7ef23062acc064de 555 PRINTS PR00662 Glucose-6-phosphate isomerase signature 467 485 1.3E-54 T 12-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 JDM601_0892 f61ada8f7dfb51bb7ef23062acc064de 555 Gene3D G3DSA:3.40.50.10490 102 295 6.1E-226 T 12-10-2018 JDM601_0892 f61ada8f7dfb51bb7ef23062acc064de 555 Gene3D G3DSA:3.40.50.10490 17 512 6.1E-226 T 12-10-2018 JDM601_0892 f61ada8f7dfb51bb7ef23062acc064de 555 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 499 516 - T 12-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 JDM601_0892 f61ada8f7dfb51bb7ef23062acc064de 555 Pfam PF00342 Phosphoglucose isomerase 56 544 2.1E-202 T 12-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 JDM601_3888 769207b04ca69690c4f15e910d1979e0 511 Gene3D G3DSA:3.30.930.10 165 511 6.9E-104 T 12-10-2018 JDM601_3888 769207b04ca69690c4f15e910d1979e0 511 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 26 509 35.842 T 12-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 JDM601_3888 769207b04ca69690c4f15e910d1979e0 511 SUPERFAMILY SSF50249 18 159 1.44E-35 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold JDM601_3888 769207b04ca69690c4f15e910d1979e0 511 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 21 508 1.8E-142 T 12-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 JDM601_3888 769207b04ca69690c4f15e910d1979e0 511 Gene3D G3DSA:2.40.50.140 19 161 1.0E-38 T 12-10-2018 JDM601_3888 769207b04ca69690c4f15e910d1979e0 511 Pfam PF01336 OB-fold nucleic acid binding domain 74 149 5.8E-10 T 12-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 JDM601_3888 769207b04ca69690c4f15e910d1979e0 511 SUPERFAMILY SSF55681 166 507 7.08E-94 T 12-10-2018 JDM601_3888 769207b04ca69690c4f15e910d1979e0 511 PRINTS PR00982 Lysyl-tRNA synthetase signature 219 235 1.5E-34 T 12-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 JDM601_3888 769207b04ca69690c4f15e910d1979e0 511 PRINTS PR00982 Lysyl-tRNA synthetase signature 248 261 1.5E-34 T 12-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 JDM601_3888 769207b04ca69690c4f15e910d1979e0 511 PRINTS PR00982 Lysyl-tRNA synthetase signature 266 283 1.5E-34 T 12-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 JDM601_3888 769207b04ca69690c4f15e910d1979e0 511 PRINTS PR00982 Lysyl-tRNA synthetase signature 392 408 1.5E-34 T 12-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 JDM601_3888 769207b04ca69690c4f15e910d1979e0 511 PRINTS PR00982 Lysyl-tRNA synthetase signature 203 213 1.5E-34 T 12-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 JDM601_3888 769207b04ca69690c4f15e910d1979e0 511 Pfam PF00152 tRNA synthetases class II (D, K and N) 166 505 5.1E-66 T 12-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 JDM601_0339 d667a8a28a1763d1ec4cf3989e76d0b5 209 PRINTS PR00773 GrpE protein signature 165 184 3.5E-24 T 12-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 JDM601_0339 d667a8a28a1763d1ec4cf3989e76d0b5 209 PRINTS PR00773 GrpE protein signature 64 80 3.5E-24 T 12-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 JDM601_0339 d667a8a28a1763d1ec4cf3989e76d0b5 209 PRINTS PR00773 GrpE protein signature 92 107 3.5E-24 T 12-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 JDM601_0339 d667a8a28a1763d1ec4cf3989e76d0b5 209 PRINTS PR00773 GrpE protein signature 140 155 3.5E-24 T 12-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 JDM601_0339 d667a8a28a1763d1ec4cf3989e76d0b5 209 ProSitePatterns PS01071 grpE protein signature. 143 184 - T 12-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 JDM601_0339 d667a8a28a1763d1ec4cf3989e76d0b5 209 Pfam PF01025 GrpE 54 185 3.1E-28 T 12-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 JDM601_0339 d667a8a28a1763d1ec4cf3989e76d0b5 209 Gene3D G3DSA:3.90.20.20 48 131 3.3E-16 T 12-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 JDM601_0339 d667a8a28a1763d1ec4cf3989e76d0b5 209 SUPERFAMILY SSF58014 54 130 5.36E-17 T 12-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 JDM601_0339 d667a8a28a1763d1ec4cf3989e76d0b5 209 SUPERFAMILY SSF51064 135 186 1.83E-12 T 12-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 JDM601_0339 d667a8a28a1763d1ec4cf3989e76d0b5 209 Hamap MF_01151 Protein GrpE [grpE]. 5 186 15.21 T 12-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 JDM601_0339 d667a8a28a1763d1ec4cf3989e76d0b5 209 Gene3D G3DSA:2.30.22.10 132 191 5.7E-14 T 12-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 JDM601_3500 ae7870d501bdaaf8ebb145ed408fc694 432 Gene3D G3DSA:1.10.630.10 3 432 2.2E-100 T 12-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_3500 ae7870d501bdaaf8ebb145ed408fc694 432 SUPERFAMILY SSF48264 13 426 3.41E-82 T 12-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_3500 ae7870d501bdaaf8ebb145ed408fc694 432 PRINTS PR00359 B-class P450 signature 151 167 7.9E-42 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3500 ae7870d501bdaaf8ebb145ed408fc694 432 PRINTS PR00359 B-class P450 signature 367 378 7.9E-42 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3500 ae7870d501bdaaf8ebb145ed408fc694 432 PRINTS PR00359 B-class P450 signature 209 231 7.9E-42 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3500 ae7870d501bdaaf8ebb145ed408fc694 432 PRINTS PR00359 B-class P450 signature 358 367 7.9E-42 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3500 ae7870d501bdaaf8ebb145ed408fc694 432 PRINTS PR00359 B-class P450 signature 291 302 7.9E-42 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3500 ae7870d501bdaaf8ebb145ed408fc694 432 PRINTS PR00359 B-class P450 signature 105 116 7.9E-42 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3500 ae7870d501bdaaf8ebb145ed408fc694 432 PRINTS PR00359 B-class P450 signature 308 335 7.9E-42 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3500 ae7870d501bdaaf8ebb145ed408fc694 432 PRINTS PR00359 B-class P450 signature 168 183 7.9E-42 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3500 ae7870d501bdaaf8ebb145ed408fc694 432 PRINTS PR00359 B-class P450 signature 336 351 7.9E-42 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3500 ae7870d501bdaaf8ebb145ed408fc694 432 Pfam PF00067 Cytochrome P450 244 387 3.0E-21 T 12-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_3500 ae7870d501bdaaf8ebb145ed408fc694 432 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 360 369 - T 12-10-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 JDM601_0388 5b252509747f63ab28df365de8dbdcf8 253 Gene3D G3DSA:3.20.20.70 2 253 3.2E-110 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JDM601_0388 5b252509747f63ab28df365de8dbdcf8 253 Pfam PF05690 Thiazole biosynthesis protein ThiG 9 251 3.1E-107 T 12-10-2018 IPR033983 Thiazole synthase ThiG KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 JDM601_0388 5b252509747f63ab28df365de8dbdcf8 253 Hamap MF_00443 Thiazole synthase [thiG]. 6 252 41.202 T 12-10-2018 IPR008867 Thiazole synthase GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 JDM601_0388 5b252509747f63ab28df365de8dbdcf8 253 SUPERFAMILY SSF110399 6 243 7.06E-83 T 12-10-2018 JDM601_1666 1363547cc94e96997bc3427128bed868 369 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 172 364 3.4E-58 T 12-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 JDM601_1666 1363547cc94e96997bc3427128bed868 369 SMART SM00855 171 325 6.9E-18 T 12-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 JDM601_1666 1363547cc94e96997bc3427128bed868 369 Gene3D G3DSA:3.30.420.10 1 137 7.2E-44 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 JDM601_1666 1363547cc94e96997bc3427128bed868 369 SUPERFAMILY SSF53098 2 128 4.17E-31 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily JDM601_1666 1363547cc94e96997bc3427128bed868 369 Pfam PF13456 Reverse transcriptase-like 8 129 1.9E-23 T 12-10-2018 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 JDM601_1666 1363547cc94e96997bc3427128bed868 369 PIRSF PIRSF036922 1 369 1.3E-187 T 12-10-2018 IPR014636 RNase H, phosphoglycerate mutase domain-containing JDM601_1666 1363547cc94e96997bc3427128bed868 369 Gene3D G3DSA:3.40.50.1240 170 369 7.4E-56 T 12-10-2018 IPR029033 Histidine phosphatase superfamily JDM601_1666 1363547cc94e96997bc3427128bed868 369 SUPERFAMILY SSF53254 169 369 9.43E-53 T 12-10-2018 IPR029033 Histidine phosphatase superfamily JDM601_4332 98bfb09b351f8bf854b60a530842fced 189 Pfam PF00293 NUDIX domain 25 127 7.2E-21 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 JDM601_4332 98bfb09b351f8bf854b60a530842fced 189 SUPERFAMILY SSF55811 25 132 1.49E-30 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 JDM601_4332 98bfb09b351f8bf854b60a530842fced 189 ProSitePatterns PS00893 Nudix box signature. 42 63 - T 12-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 JDM601_4332 98bfb09b351f8bf854b60a530842fced 189 PRINTS PR00502 NUDIX hydrolase family signature 51 66 9.5E-8 T 12-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 JDM601_4332 98bfb09b351f8bf854b60a530842fced 189 PRINTS PR00502 NUDIX hydrolase family signature 37 51 9.5E-8 T 12-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 JDM601_4332 98bfb09b351f8bf854b60a530842fced 189 Gene3D G3DSA:3.90.79.10 1 144 2.2E-32 T 12-10-2018 JDM601_3545 3369bb28c653d75a695a16577fc2c0d5 277 Gene3D G3DSA:3.40.250.10 142 277 9.6E-43 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily JDM601_3545 3369bb28c653d75a695a16577fc2c0d5 277 ProSitePatterns PS00683 Rhodanese C-terminal signature. 255 265 - T 12-10-2018 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350|MetaCyc: PWY-7927|Reactome: R-HSA-1614558 JDM601_3545 3369bb28c653d75a695a16577fc2c0d5 277 SUPERFAMILY SSF52821 3 139 1.44E-34 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily JDM601_3545 3369bb28c653d75a695a16577fc2c0d5 277 SMART SM00450 144 271 3.0E-22 T 12-10-2018 IPR001763 Rhodanese-like domain JDM601_3545 3369bb28c653d75a695a16577fc2c0d5 277 SMART SM00450 8 122 4.0E-20 T 12-10-2018 IPR001763 Rhodanese-like domain JDM601_3545 3369bb28c653d75a695a16577fc2c0d5 277 Gene3D G3DSA:3.40.250.10 1 141 1.7E-40 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily JDM601_3545 3369bb28c653d75a695a16577fc2c0d5 277 ProSitePatterns PS00380 Rhodanese signature 1. 34 45 - T 12-10-2018 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350|MetaCyc: PWY-7927|Reactome: R-HSA-1614558 JDM601_3545 3369bb28c653d75a695a16577fc2c0d5 277 SUPERFAMILY SSF52821 145 274 1.31E-34 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily JDM601_3545 3369bb28c653d75a695a16577fc2c0d5 277 Pfam PF00581 Rhodanese-like domain 9 118 7.5E-16 T 12-10-2018 IPR001763 Rhodanese-like domain JDM601_3545 3369bb28c653d75a695a16577fc2c0d5 277 Pfam PF00581 Rhodanese-like domain 149 266 2.1E-18 T 12-10-2018 IPR001763 Rhodanese-like domain JDM601_1950 ad86a4d01523f3e1596de8173b6b1ab8 335 Gene3D G3DSA:3.90.180.10 16 324 9.5E-86 T 12-10-2018 JDM601_1950 ad86a4d01523f3e1596de8173b6b1ab8 335 SUPERFAMILY SSF50129 2 176 2.04E-47 T 12-10-2018 IPR011032 GroES-like superfamily JDM601_1950 ad86a4d01523f3e1596de8173b6b1ab8 335 TIGRFAM TIGR02822 adh_fam_2: zinc-binding alcohol dehydrogenase family protein 5 334 7.1E-186 T 12-10-2018 IPR014187 Alcohol dehydrogenase, zinc-binding type 2 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396 JDM601_1950 ad86a4d01523f3e1596de8173b6b1ab8 335 SUPERFAMILY SSF51735 145 303 3.83E-29 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_1950 ad86a4d01523f3e1596de8173b6b1ab8 335 SMART SM00829 16 333 8.7E-4 T 12-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 JDM601_1950 ad86a4d01523f3e1596de8173b6b1ab8 335 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 65 79 - T 12-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 JDM601_1950 ad86a4d01523f3e1596de8173b6b1ab8 335 Pfam PF00107 Zinc-binding dehydrogenase 184 299 2.1E-7 T 12-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 JDM601_1950 ad86a4d01523f3e1596de8173b6b1ab8 335 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 32 138 7.1E-30 T 12-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 JDM601_1950 ad86a4d01523f3e1596de8173b6b1ab8 335 Gene3D G3DSA:3.40.50.720 154 284 9.5E-86 T 12-10-2018 JDM601_2806 c0dfe78f35a93ebfeda6ad4de646dcfd 260 Gene3D G3DSA:3.40.225.10 29 256 4.8E-45 T 12-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily JDM601_2806 c0dfe78f35a93ebfeda6ad4de646dcfd 260 SMART SM01007 33 211 3.7E-38 T 12-10-2018 IPR001303 Class II aldolase/adducin N-terminal JDM601_2806 c0dfe78f35a93ebfeda6ad4de646dcfd 260 SUPERFAMILY SSF53639 32 232 1.59E-43 T 12-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily JDM601_2806 c0dfe78f35a93ebfeda6ad4de646dcfd 260 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 34 210 5.7E-35 T 12-10-2018 IPR001303 Class II aldolase/adducin N-terminal JDM601_1454 b577e871e1e9a64b99ea0024eeb15a19 194 Pfam PF12804 MobA-like NTP transferase domain 10 163 2.4E-29 T 12-10-2018 IPR025877 MobA-like NTP transferase JDM601_1454 b577e871e1e9a64b99ea0024eeb15a19 194 Gene3D G3DSA:3.90.550.10 3 194 5.4E-46 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases JDM601_1454 b577e871e1e9a64b99ea0024eeb15a19 194 Hamap MF_00316 Molybdenum cofactor guanylyltransferase [mobA]. 6 193 22.137 T 12-10-2018 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 KEGG: 00790+2.7.7.77|MetaCyc: PWY-5964|MetaCyc: PWY-7639 JDM601_1454 b577e871e1e9a64b99ea0024eeb15a19 194 SUPERFAMILY SSF53448 9 189 7.89E-26 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases JDM601_3330 d18708ee395a02af85d168c0c83e4d21 80 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 5 64 17.019 T 12-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JDM601_3330 d18708ee395a02af85d168c0c83e4d21 80 Gene3D G3DSA:1.10.287.310 6 70 5.0E-26 T 12-10-2018 JDM601_3330 d18708ee395a02af85d168c0c83e4d21 80 TIGRFAM TIGR00012 L29: ribosomal protein uL29 9 64 1.9E-20 T 12-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JDM601_3330 d18708ee395a02af85d168c0c83e4d21 80 ProSitePatterns PS00579 Ribosomal protein L29 signature. 43 57 - T 12-10-2018 IPR018254 Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JDM601_3330 d18708ee395a02af85d168c0c83e4d21 80 SUPERFAMILY SSF46561 6 67 1.7E-22 T 12-10-2018 IPR036049 Ribosomal protein L29/L35 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JDM601_3330 d18708ee395a02af85d168c0c83e4d21 80 Pfam PF00831 Ribosomal L29 protein 9 64 1.5E-24 T 12-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JDM601_1529 ec163679a871233dea4163968ceae4b2 1175 Gene3D G3DSA:1.10.1200.10 3 80 7.0E-25 T 12-10-2018 IPR036736 ACP-like superfamily JDM601_1529 ec163679a871233dea4163968ceae4b2 1175 Pfam PF00501 AMP-binding enzyme 555 952 1.6E-87 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 JDM601_1529 ec163679a871233dea4163968ceae4b2 1175 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 576 976 1.4E-116 T 12-10-2018 IPR010071 Amino acid adenylation domain JDM601_1529 ec163679a871233dea4163968ceae4b2 1175 Pfam PF00550 Phosphopantetheine attachment site 1070 1135 2.8E-11 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain JDM601_1529 ec163679a871233dea4163968ceae4b2 1175 Pfam PF00550 Phosphopantetheine attachment site 10 74 2.6E-10 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain JDM601_1529 ec163679a871233dea4163968ceae4b2 1175 Gene3D G3DSA:3.30.300.30 950 1052 2.0E-22 T 12-10-2018 JDM601_1529 ec163679a871233dea4163968ceae4b2 1175 SMART SM00823 Phosphopantetheine attachment site 1068 1140 0.001 T 12-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 JDM601_1529 ec163679a871233dea4163968ceae4b2 1175 SMART SM00823 Phosphopantetheine attachment site 8 78 0.082 T 12-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 JDM601_1529 ec163679a871233dea4163968ceae4b2 1175 Gene3D G3DSA:3.40.50.12780 542 947 2.5E-113 T 12-10-2018 JDM601_1529 ec163679a871233dea4163968ceae4b2 1175 SUPERFAMILY SSF47336 1063 1136 1.57E-12 T 12-10-2018 IPR036736 ACP-like superfamily JDM601_1529 ec163679a871233dea4163968ceae4b2 1175 SUPERFAMILY SSF56801 542 1080 1.7E-130 T 12-10-2018 JDM601_1529 ec163679a871233dea4163968ceae4b2 1175 SUPERFAMILY SSF52777 278 517 6.23E-38 T 12-10-2018 JDM601_1529 ec163679a871233dea4163968ceae4b2 1175 ProSitePatterns PS00455 Putative AMP-binding domain signature. 693 704 - T 12-10-2018 IPR020845 AMP-binding, conserved site JDM601_1529 ec163679a871233dea4163968ceae4b2 1175 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1094 1109 - T 12-10-2018 IPR006162 Phosphopantetheine attachment site JDM601_1529 ec163679a871233dea4163968ceae4b2 1175 SUPERFAMILY SSF47336 10 116 2.22E-14 T 12-10-2018 IPR036736 ACP-like superfamily JDM601_1529 ec163679a871233dea4163968ceae4b2 1175 Gene3D G3DSA:3.30.559.10 99 272 3.0E-39 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 JDM601_1529 ec163679a871233dea4163968ceae4b2 1175 Gene3D G3DSA:3.40.50.1820 1058 1173 2.1E-17 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_1529 ec163679a871233dea4163968ceae4b2 1175 Gene3D G3DSA:3.30.559.30 275 526 9.7E-68 T 12-10-2018 JDM601_1529 ec163679a871233dea4163968ceae4b2 1175 SUPERFAMILY SSF52777 101 266 2.67E-17 T 12-10-2018 JDM601_1529 ec163679a871233dea4163968ceae4b2 1175 Pfam PF00668 Condensation domain 105 436 1.4E-20 T 12-10-2018 IPR001242 Condensation domain JDM601_1555 28946be4480f9e22d998e463bae6f64f 178 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 2 158 20.951 T 12-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 JDM601_1555 28946be4480f9e22d998e463bae6f64f 178 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 36 148 1.8E-32 T 12-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 JDM601_1555 28946be4480f9e22d998e463bae6f64f 178 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 118 128 - T 12-10-2018 IPR020549 Endoribonuclease YbeY, conserved site JDM601_1555 28946be4480f9e22d998e463bae6f64f 178 Pfam PF02130 Uncharacterized protein family UPF0054 21 147 3.1E-36 T 12-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 JDM601_1555 28946be4480f9e22d998e463bae6f64f 178 Gene3D G3DSA:3.40.390.30 1 157 2.3E-37 T 12-10-2018 IPR023091 Metalloprotease catalytic domain superfamily, predicted GO:0004222 JDM601_1555 28946be4480f9e22d998e463bae6f64f 178 SUPERFAMILY SSF55486 6 147 1.17E-38 T 12-10-2018 JDM601_3105 e2686ef8efa85b8d58681af2314c39bf 262 SUPERFAMILY SSF88659 116 193 5.67E-15 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like JDM601_3105 e2686ef8efa85b8d58681af2314c39bf 262 Gene3D G3DSA:1.10.10.10 113 165 5.2E-18 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JDM601_3105 e2686ef8efa85b8d58681af2314c39bf 262 Pfam PF04539 Sigma-70 region 3 126 190 1.8E-12 T 12-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 JDM601_3105 e2686ef8efa85b8d58681af2314c39bf 262 SUPERFAMILY SSF88946 22 112 3.27E-25 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 JDM601_3105 e2686ef8efa85b8d58681af2314c39bf 262 Pfam PF04545 Sigma-70, region 4 210 259 2.1E-17 T 12-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 JDM601_3105 e2686ef8efa85b8d58681af2314c39bf 262 PRINTS PR00046 Major sigma-70 factor signature 231 246 9.7E-10 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 JDM601_3105 e2686ef8efa85b8d58681af2314c39bf 262 PRINTS PR00046 Major sigma-70 factor signature 246 257 9.7E-10 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 JDM601_3105 e2686ef8efa85b8d58681af2314c39bf 262 PRINTS PR00046 Major sigma-70 factor signature 67 80 9.7E-10 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 JDM601_3105 e2686ef8efa85b8d58681af2314c39bf 262 PRINTS PR00046 Major sigma-70 factor signature 214 226 9.7E-10 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 JDM601_3105 e2686ef8efa85b8d58681af2314c39bf 262 Gene3D G3DSA:1.10.10.10 194 262 2.2E-16 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JDM601_3105 e2686ef8efa85b8d58681af2314c39bf 262 SUPERFAMILY SSF88659 185 261 2.99E-18 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like JDM601_3105 e2686ef8efa85b8d58681af2314c39bf 262 TIGRFAM TIGR02980 SigBFG: RNA polymerase sigma-70 factor, sigma-B/F/G subfamily 39 261 2.3E-93 T 12-10-2018 IPR014322 RNA polymerase sigma-B/F/G type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 JDM601_3105 e2686ef8efa85b8d58681af2314c39bf 262 Gene3D G3DSA:1.20.120.1810 5 111 2.5E-14 T 12-10-2018 JDM601_3105 e2686ef8efa85b8d58681af2314c39bf 262 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 41 261 1.3E-35 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 JDM601_3105 e2686ef8efa85b8d58681af2314c39bf 262 Pfam PF04542 Sigma-70 region 2 44 112 7.5E-14 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 JDM601_3889 06c54fd96e7a17b3c86d4eb8ec29b65f 269 Hamap MF_01274 Type III pantothenate kinase [coaX]. 1 258 31.09 T 12-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 JDM601_3889 06c54fd96e7a17b3c86d4eb8ec29b65f 269 SUPERFAMILY SSF53067 126 257 4.75E-29 T 12-10-2018 JDM601_3889 06c54fd96e7a17b3c86d4eb8ec29b65f 269 Gene3D G3DSA:3.30.420.40 91 266 7.7E-52 T 12-10-2018 JDM601_3889 06c54fd96e7a17b3c86d4eb8ec29b65f 269 TIGRFAM TIGR00671 baf: pantothenate kinase, type III 2 254 3.6E-87 T 12-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 JDM601_3889 06c54fd96e7a17b3c86d4eb8ec29b65f 269 Pfam PF03309 Type III pantothenate kinase 2 208 6.9E-57 T 12-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 JDM601_3889 06c54fd96e7a17b3c86d4eb8ec29b65f 269 SUPERFAMILY SSF53067 2 123 1.01E-23 T 12-10-2018 JDM601_3889 06c54fd96e7a17b3c86d4eb8ec29b65f 269 Gene3D G3DSA:3.30.420.40 1 89 9.0E-18 T 12-10-2018 JDM601_2581 2858ca2e20e9814a668787e5ede18eb6 454 Gene3D G3DSA:3.10.20.70 6 120 1.4E-6 T 12-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 JDM601_2581 2858ca2e20e9814a668787e5ede18eb6 454 SUPERFAMILY SSF55931 120 452 1.08E-99 T 12-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 JDM601_2581 2858ca2e20e9814a668787e5ede18eb6 454 Gene3D G3DSA:3.30.590.10 122 454 9.6E-99 T 12-10-2018 JDM601_2581 2858ca2e20e9814a668787e5ede18eb6 454 SMART SM01230 119 372 2.0E-95 T 12-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 JDM601_2581 2858ca2e20e9814a668787e5ede18eb6 454 SUPERFAMILY SSF54368 12 117 2.62E-16 T 12-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 JDM601_2581 2858ca2e20e9814a668787e5ede18eb6 454 Pfam PF00120 Glutamine synthetase, catalytic domain 120 447 9.8E-100 T 12-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 JDM601_4133 eac91bcf2f981c0d2c4114e9a5a30b39 242 SMART SM00563 17 133 6.8E-34 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 JDM601_4133 eac91bcf2f981c0d2c4114e9a5a30b39 242 SUPERFAMILY SSF69593 2 187 2.09E-31 T 12-10-2018 JDM601_4133 eac91bcf2f981c0d2c4114e9a5a30b39 242 Pfam PF01553 Acyltransferase 2 130 1.9E-30 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 JDM601_3723 a8908097c83e284e015abbc673fed630 396 Gene3D G3DSA:3.40.640.10 11 394 9.4E-126 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 JDM601_3723 a8908097c83e284e015abbc673fed630 396 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 239 252 - T 12-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 JDM601_3723 a8908097c83e284e015abbc673fed630 396 SUPERFAMILY SSF53383 15 393 1.58E-100 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase JDM601_3723 a8908097c83e284e015abbc673fed630 396 Pfam PF00155 Aminotransferase class I and II 38 389 1.3E-55 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 JDM601_1775 cbbd50cc5232c12dd01ed9f0510baea8 1242 SMART SM01018 662 749 4.8E-41 T 12-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 JDM601_1775 cbbd50cc5232c12dd01ed9f0510baea8 1242 Pfam PF02310 B12 binding domain 760 853 1.3E-18 T 12-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 JDM601_1775 cbbd50cc5232c12dd01ed9f0510baea8 1242 Gene3D G3DSA:3.10.196.10 919 1237 8.4E-139 T 12-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 JDM601_1775 cbbd50cc5232c12dd01ed9f0510baea8 1242 Gene3D G3DSA:3.20.20.20 347 648 1.5E-131 T 12-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 JDM601_1775 cbbd50cc5232c12dd01ed9f0510baea8 1242 SUPERFAMILY SSF51717 362 636 1.15E-89 T 12-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 JDM601_1775 cbbd50cc5232c12dd01ed9f0510baea8 1242 SUPERFAMILY SSF56507 913 1241 7.19E-127 T 12-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 JDM601_1775 cbbd50cc5232c12dd01ed9f0510baea8 1242 Gene3D G3DSA:1.10.288.10 949 1106 8.4E-139 T 12-10-2018 JDM601_1775 cbbd50cc5232c12dd01ed9f0510baea8 1242 TIGRFAM TIGR02082 metH: methionine synthase 20 1205 0.0 T 12-10-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 JDM601_1775 cbbd50cc5232c12dd01ed9f0510baea8 1242 Pfam PF00809 Pterin binding enzyme 366 604 3.3E-58 T 12-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 JDM601_1775 cbbd50cc5232c12dd01ed9f0510baea8 1242 Pfam PF02607 B12 binding domain 665 741 2.3E-24 T 12-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 JDM601_1775 cbbd50cc5232c12dd01ed9f0510baea8 1242 Pfam PF02574 Homocysteine S-methyltransferase 25 331 2.2E-77 T 12-10-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 JDM601_1775 cbbd50cc5232c12dd01ed9f0510baea8 1242 SUPERFAMILY SSF52242 755 906 8.24E-43 T 12-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 JDM601_1775 cbbd50cc5232c12dd01ed9f0510baea8 1242 Gene3D G3DSA:1.10.1240.10 654 746 3.3E-36 T 12-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 JDM601_1775 cbbd50cc5232c12dd01ed9f0510baea8 1242 SUPERFAMILY SSF82282 15 405 1.11E-114 T 12-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 JDM601_1775 cbbd50cc5232c12dd01ed9f0510baea8 1242 SUPERFAMILY SSF47644 658 748 6.41E-26 T 12-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 JDM601_1775 cbbd50cc5232c12dd01ed9f0510baea8 1242 Pfam PF02965 Vitamin B12 dependent methionine synthase, activation domain 950 1222 1.1E-119 T 12-10-2018 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 JDM601_1775 cbbd50cc5232c12dd01ed9f0510baea8 1242 Gene3D G3DSA:3.40.50.280 756 907 4.0E-54 T 12-10-2018 JDM601_1775 cbbd50cc5232c12dd01ed9f0510baea8 1242 PIRSF PIRSF000381 9 1209 0.0 T 12-10-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 JDM601_1775 cbbd50cc5232c12dd01ed9f0510baea8 1242 Gene3D G3DSA:3.20.20.330 10 346 2.3E-125 T 12-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 JDM601_3175 1f863f9ceddeab24ce87c3a179e6ac55 94 SUPERFAMILY SSF54909 4 93 2.49E-27 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel JDM601_3175 1f863f9ceddeab24ce87c3a179e6ac55 94 Gene3D G3DSA:3.30.70.100 1 93 6.5E-36 T 12-10-2018 JDM601_3175 1f863f9ceddeab24ce87c3a179e6ac55 94 Pfam PF03992 Antibiotic biosynthesis monooxygenase 6 74 7.8E-15 T 12-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain JDM601_3713 dfbb981a4bc5f7ee7ea258f564b4965b 394 Gene3D G3DSA:3.40.47.10 133 388 3.4E-134 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 JDM601_3713 dfbb981a4bc5f7ee7ea258f564b4965b 394 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 12 390 3.1E-123 T 12-10-2018 IPR002155 Thiolase GO:0016747 JDM601_3713 dfbb981a4bc5f7ee7ea258f564b4965b 394 Pfam PF02803 Thiolase, C-terminal domain 269 391 2.6E-41 T 12-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 JDM601_3713 dfbb981a4bc5f7ee7ea258f564b4965b 394 SUPERFAMILY SSF53901 270 391 2.04E-42 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 JDM601_3713 dfbb981a4bc5f7ee7ea258f564b4965b 394 Pfam PF00108 Thiolase, N-terminal domain 11 262 7.6E-60 T 12-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 JDM601_3713 dfbb981a4bc5f7ee7ea258f564b4965b 394 Gene3D G3DSA:3.40.47.10 12 275 3.4E-134 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 JDM601_3713 dfbb981a4bc5f7ee7ea258f564b4965b 394 SUPERFAMILY SSF53901 10 269 6.26E-67 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 JDM601_3713 dfbb981a4bc5f7ee7ea258f564b4965b 394 PIRSF PIRSF000429 6 393 2.2E-114 T 12-10-2018 IPR002155 Thiolase GO:0016747 JDM601_3713 dfbb981a4bc5f7ee7ea258f564b4965b 394 ProSitePatterns PS00737 Thiolases signature 2. 338 354 - T 12-10-2018 IPR020613 Thiolase, conserved site GO:0016747 JDM601_2651 12610f1bf810f9b5f588edacec6cd71e 138 Gene3D G3DSA:3.30.300.20 2 134 6.7E-15 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta JDM601_2651 12610f1bf810f9b5f588edacec6cd71e 138 SUPERFAMILY SSF82784 3 132 1.31E-18 T 12-10-2018 IPR036102 OsmC/Ohr superfamily JDM601_2651 12610f1bf810f9b5f588edacec6cd71e 138 Pfam PF02566 OsmC-like protein 32 130 1.8E-9 T 12-10-2018 IPR003718 OsmC/Ohr family JDM601_0611 ef6ec4b2cd0d6775efafb5abbbb22513 818 SUPERFAMILY SSF52540 70 662 1.37E-27 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_0611 ef6ec4b2cd0d6775efafb5abbbb22513 818 Pfam PF13476 AAA domain 73 174 5.6E-13 T 12-10-2018 IPR038729 Rad50/SbcC-type AAA domain JDM601_0611 ef6ec4b2cd0d6775efafb5abbbb22513 818 Gene3D G3DSA:3.40.50.300 70 347 1.1E-16 T 12-10-2018 JDM601_0611 ef6ec4b2cd0d6775efafb5abbbb22513 818 Gene3D G3DSA:3.40.50.300 447 681 3.6E-13 T 12-10-2018 JDM601_3882 f7370ea0e5a4722c5bd8a686f2da80c4 299 SMART SM00478 37 188 4.5E-47 T 12-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 JDM601_3882 f7370ea0e5a4722c5bd8a686f2da80c4 299 SMART SM00525 189 209 8.4E-7 T 12-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 JDM601_3882 f7370ea0e5a4722c5bd8a686f2da80c4 299 Pfam PF00633 Helix-hairpin-helix motif 99 126 1.1E-7 T 12-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 JDM601_3882 f7370ea0e5a4722c5bd8a686f2da80c4 299 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 33 149 7.4E-17 T 12-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 JDM601_3882 f7370ea0e5a4722c5bd8a686f2da80c4 299 Gene3D G3DSA:1.10.340.30 18 130 7.2E-71 T 12-10-2018 JDM601_3882 f7370ea0e5a4722c5bd8a686f2da80c4 299 Gene3D G3DSA:1.10.1670.10 7 208 7.2E-71 T 12-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 JDM601_3882 f7370ea0e5a4722c5bd8a686f2da80c4 299 SUPERFAMILY SSF48150 7 213 3.14E-64 T 12-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 JDM601_3882 f7370ea0e5a4722c5bd8a686f2da80c4 299 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 190 206 1.1E-4 T 12-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 JDM601_1835 03e4a00fa2beb102ab30f5c57d627fd7 168 Pfam PF01316 Arginine repressor, DNA binding domain 16 83 3.8E-22 T 12-10-2018 IPR020900 Arginine repressor, DNA-binding domain GO:0003700|GO:0006355|GO:0006525 JDM601_1835 03e4a00fa2beb102ab30f5c57d627fd7 168 Pfam PF02863 Arginine repressor, C-terminal domain 100 165 1.9E-23 T 12-10-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 JDM601_1835 03e4a00fa2beb102ab30f5c57d627fd7 168 Gene3D G3DSA:3.30.1360.40 90 168 1.4E-29 T 12-10-2018 JDM601_1835 03e4a00fa2beb102ab30f5c57d627fd7 168 ProDom PD007402 ARGININE REPRESSOR TRANSCRIPTION BIOSYNTHESIS DNA-BINDING REGULATION AMINO-ACID ARGR TRANSCRIPTIONAL FAMILY 107 161 1.0E-18 T 12-10-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 JDM601_1835 03e4a00fa2beb102ab30f5c57d627fd7 168 TIGRFAM TIGR01529 argR_whole: arginine repressor 19 167 1.6E-45 T 12-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 JDM601_1835 03e4a00fa2beb102ab30f5c57d627fd7 168 SUPERFAMILY SSF55252 99 165 1.7E-17 T 12-10-2018 IPR036251 Arginine repressor, C-terminal domain superfamily GO:0034618|GO:0051259 JDM601_1835 03e4a00fa2beb102ab30f5c57d627fd7 168 PRINTS PR01467 Bacterial arginine repressor signature 35 48 7.7E-27 T 12-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 JDM601_1835 03e4a00fa2beb102ab30f5c57d627fd7 168 PRINTS PR01467 Bacterial arginine repressor signature 107 120 7.7E-27 T 12-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 JDM601_1835 03e4a00fa2beb102ab30f5c57d627fd7 168 PRINTS PR01467 Bacterial arginine repressor signature 51 66 7.7E-27 T 12-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 JDM601_1835 03e4a00fa2beb102ab30f5c57d627fd7 168 PRINTS PR01467 Bacterial arginine repressor signature 137 152 7.7E-27 T 12-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 JDM601_1835 03e4a00fa2beb102ab30f5c57d627fd7 168 Gene3D G3DSA:1.10.10.10 2 88 6.6E-28 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JDM601_1835 03e4a00fa2beb102ab30f5c57d627fd7 168 SUPERFAMILY SSF46785 15 83 5.22E-16 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JDM601_1835 03e4a00fa2beb102ab30f5c57d627fd7 168 Hamap MF_00173 Arginine repressor [argR]. 1 168 56.264 T 12-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 JDM601_3908 85eac7f9eb2deaa142adeaa3f5ac8de9 345 Pfam PF10103 Zincin-like metallopeptidase 10 341 3.5E-102 T 12-10-2018 IPR018766 Zinicin-like metallopeptidase type 2 JDM601_3908 85eac7f9eb2deaa142adeaa3f5ac8de9 345 TIGRFAM TIGR03883 DUF2342_F420: uncharacterized protein, coenzyme F420 biosynthesis associated 10 344 8.2E-123 T 12-10-2018 IPR022454 Conserved hypothetical protein CHP03883, F420 biosynthesis associated JDM601_3908 85eac7f9eb2deaa142adeaa3f5ac8de9 345 SUPERFAMILY SSF55486 10 344 8.42E-100 T 12-10-2018 JDM601_3908 85eac7f9eb2deaa142adeaa3f5ac8de9 345 Gene3D G3DSA:1.20.150.30 9 126 2.7E-18 T 12-10-2018 JDM601_3908 85eac7f9eb2deaa142adeaa3f5ac8de9 345 TIGRFAM TIGR03624 TIGR03624: putative hydrolase 10 344 9.3E-110 T 12-10-2018 IPR018766 Zinicin-like metallopeptidase type 2 JDM601_2302 148432d1534ba3a0ad83024f9dba5f02 403 PIRSF PIRSF000497 1 403 1.7E-160 T 12-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 JDM601_2302 148432d1534ba3a0ad83024f9dba5f02 403 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 131 141 - T 12-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 JDM601_2302 148432d1534ba3a0ad83024f9dba5f02 403 Pfam PF02772 S-adenosylmethionine synthetase, central domain 130 251 9.1E-45 T 12-10-2018 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 JDM601_2302 148432d1534ba3a0ad83024f9dba5f02 403 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 7 106 2.4E-37 T 12-10-2018 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 JDM601_2302 148432d1534ba3a0ad83024f9dba5f02 403 Gene3D G3DSA:3.30.300.10 7 253 1.2E-164 T 12-10-2018 JDM601_2302 148432d1534ba3a0ad83024f9dba5f02 403 Gene3D G3DSA:3.30.300.10 107 395 1.2E-164 T 12-10-2018 JDM601_2302 148432d1534ba3a0ad83024f9dba5f02 403 SUPERFAMILY SSF55973 126 252 4.71E-45 T 12-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 JDM601_2302 148432d1534ba3a0ad83024f9dba5f02 403 SUPERFAMILY SSF55973 6 114 2.08E-41 T 12-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 JDM601_2302 148432d1534ba3a0ad83024f9dba5f02 403 Gene3D G3DSA:3.30.300.10 13 290 1.2E-164 T 12-10-2018 JDM601_2302 148432d1534ba3a0ad83024f9dba5f02 403 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 7 403 3.2E-163 T 12-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 JDM601_2302 148432d1534ba3a0ad83024f9dba5f02 403 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 253 392 9.7E-66 T 12-10-2018 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 JDM601_2302 148432d1534ba3a0ad83024f9dba5f02 403 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 4 403 56.076 T 12-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 JDM601_2302 148432d1534ba3a0ad83024f9dba5f02 403 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 279 287 - T 12-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 JDM601_2302 148432d1534ba3a0ad83024f9dba5f02 403 SUPERFAMILY SSF55973 253 401 1.22E-66 T 12-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 JDM601_1756 af0664583c681d8b97e1de69cb91b862 355 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 6 355 1.3E-142 T 12-10-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 JDM601_1756 af0664583c681d8b97e1de69cb91b862 355 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 290 310 - T 12-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 JDM601_1756 af0664583c681d8b97e1de69cb91b862 355 PIRSF PIRSF000164 22 355 1.3E-102 T 12-10-2018 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 JDM601_1756 af0664583c681d8b97e1de69cb91b862 355 Pfam PF01180 Dihydroorotate dehydrogenase 51 338 1.2E-96 T 12-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 JDM601_1756 af0664583c681d8b97e1de69cb91b862 355 Gene3D G3DSA:3.20.20.70 33 355 1.0E-133 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JDM601_1756 af0664583c681d8b97e1de69cb91b862 355 Hamap MF_00225 Dihydroorotate dehydrogenase (quinone) [pyrD]. 3 334 47.255 T 12-10-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 JDM601_1756 af0664583c681d8b97e1de69cb91b862 355 SUPERFAMILY SSF51395 5 353 1.19E-96 T 12-10-2018 JDM601_1756 af0664583c681d8b97e1de69cb91b862 355 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 86 105 - T 12-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 JDM601_0667 4202b1cc596665e68f6ddf900600d4ab 301 Pfam PF00561 alpha/beta hydrolase fold 26 143 5.1E-15 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 JDM601_0667 4202b1cc596665e68f6ddf900600d4ab 301 Gene3D G3DSA:3.40.50.1820 6 298 9.2E-65 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_0667 4202b1cc596665e68f6ddf900600d4ab 301 SUPERFAMILY SSF53474 5 293 1.33E-60 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_1420 2cf3f9fa23dc82dc1c491cf6c66b73f0 400 Gene3D G3DSA:3.30.559.10 177 397 5.4E-77 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 JDM601_1420 2cf3f9fa23dc82dc1c491cf6c66b73f0 400 Pfam PF00364 Biotin-requiring enzyme 8 80 1.5E-18 T 12-10-2018 IPR000089 Biotin/lipoyl attachment JDM601_1420 2cf3f9fa23dc82dc1c491cf6c66b73f0 400 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 171 397 1.1E-67 T 12-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 JDM601_1420 2cf3f9fa23dc82dc1c491cf6c66b73f0 400 SUPERFAMILY SSF52777 170 399 5.78E-67 T 12-10-2018 JDM601_1420 2cf3f9fa23dc82dc1c491cf6c66b73f0 400 SUPERFAMILY SSF51230 6 96 2.09E-23 T 12-10-2018 IPR011053 Single hybrid motif JDM601_1420 2cf3f9fa23dc82dc1c491cf6c66b73f0 400 Gene3D G3DSA:2.40.50.100 7 83 3.5E-22 T 12-10-2018 JDM601_1420 2cf3f9fa23dc82dc1c491cf6c66b73f0 400 Gene3D G3DSA:4.10.320.10 124 164 2.5E-6 T 12-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 JDM601_1420 2cf3f9fa23dc82dc1c491cf6c66b73f0 400 Pfam PF02817 e3 binding domain 126 159 4.7E-6 T 12-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 JDM601_0926 da1772d3e9c434ffaf0e3ba59579355a 388 Gene3D G3DSA:2.40.110.10 123 236 2.0E-27 T 12-10-2018 JDM601_0926 da1772d3e9c434ffaf0e3ba59579355a 388 SUPERFAMILY SSF47203 235 384 1.26E-33 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 JDM601_0926 da1772d3e9c434ffaf0e3ba59579355a 388 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 9 119 3.1E-26 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 JDM601_0926 da1772d3e9c434ffaf0e3ba59579355a 388 Gene3D G3DSA:1.20.140.10 237 387 3.8E-30 T 12-10-2018 JDM601_0926 da1772d3e9c434ffaf0e3ba59579355a 388 SUPERFAMILY SSF56645 5 244 7.59E-61 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 JDM601_0926 da1772d3e9c434ffaf0e3ba59579355a 388 Gene3D G3DSA:1.10.540.10 1 121 1.2E-27 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 JDM601_0926 da1772d3e9c434ffaf0e3ba59579355a 388 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 239 379 2.0E-26 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 JDM601_0926 da1772d3e9c434ffaf0e3ba59579355a 388 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 124 204 1.4E-17 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 JDM601_2466 9852fa43b0a98af4958192c62a948427 426 SMART SM00487 8 208 6.7E-45 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain JDM601_2466 9852fa43b0a98af4958192c62a948427 426 Pfam PF00270 DEAD/DEAH box helicase 13 182 2.6E-43 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 JDM601_2466 9852fa43b0a98af4958192c62a948427 426 SMART SM00490 243 324 3.0E-24 T 12-10-2018 IPR001650 Helicase, C-terminal JDM601_2466 9852fa43b0a98af4958192c62a948427 426 SUPERFAMILY SSF52540 61 342 1.33E-59 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_2466 9852fa43b0a98af4958192c62a948427 426 Gene3D G3DSA:3.40.50.300 207 368 3.8E-38 T 12-10-2018 JDM601_2466 9852fa43b0a98af4958192c62a948427 426 Gene3D G3DSA:3.40.50.300 1 196 4.3E-62 T 12-10-2018 JDM601_2466 9852fa43b0a98af4958192c62a948427 426 Pfam PF00271 Helicase conserved C-terminal domain 226 324 1.1E-21 T 12-10-2018 IPR001650 Helicase, C-terminal JDM601_1298 ca4836b6dcf1b7bb2c4c9084d3033530 358 SMART SM00937 66 179 5.0E-46 T 12-10-2018 IPR005139 Peptide chain release factor GO:0006415 JDM601_1298 ca4836b6dcf1b7bb2c4c9084d3033530 358 Pfam PF03462 PCRF domain 13 204 1.4E-61 T 12-10-2018 IPR005139 Peptide chain release factor GO:0006415 JDM601_1298 ca4836b6dcf1b7bb2c4c9084d3033530 358 Gene3D G3DSA:3.30.70.1660 108 343 1.6E-91 T 12-10-2018 JDM601_1298 ca4836b6dcf1b7bb2c4c9084d3033530 358 Gene3D G3DSA:1.20.58.410 2 97 1.5E-9 T 12-10-2018 JDM601_1298 ca4836b6dcf1b7bb2c4c9084d3033530 358 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 229 245 - T 12-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 JDM601_1298 ca4836b6dcf1b7bb2c4c9084d3033530 358 Pfam PF00472 RF-1 domain 215 322 3.4E-39 T 12-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 JDM601_1298 ca4836b6dcf1b7bb2c4c9084d3033530 358 SUPERFAMILY SSF75620 11 354 7.72E-121 T 12-10-2018 JDM601_1298 ca4836b6dcf1b7bb2c4c9084d3033530 358 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 4 358 35.982 T 12-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 JDM601_1298 ca4836b6dcf1b7bb2c4c9084d3033530 358 Gene3D G3DSA:3.30.160.20 211 298 1.6E-91 T 12-10-2018 JDM601_1298 ca4836b6dcf1b7bb2c4c9084d3033530 358 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 4 355 4.0E-148 T 12-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 JDM601_0478 54f6cb83d314910c41a80ab8b66f24bc 393 SUPERFAMILY SSF47384 144 224 2.16E-15 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 JDM601_0478 54f6cb83d314910c41a80ab8b66f24bc 393 Gene3D G3DSA:1.10.287.130 152 225 5.1E-16 T 12-10-2018 JDM601_0478 54f6cb83d314910c41a80ab8b66f24bc 393 SMART SM00388 160 226 3.0E-16 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JDM601_0478 54f6cb83d314910c41a80ab8b66f24bc 393 Gene3D G3DSA:3.30.565.10 233 388 5.3E-41 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JDM601_0478 54f6cb83d314910c41a80ab8b66f24bc 393 PRINTS PR00344 Bacterial sensor protein C-terminal signature 326 336 1.3E-18 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JDM601_0478 54f6cb83d314910c41a80ab8b66f24bc 393 PRINTS PR00344 Bacterial sensor protein C-terminal signature 308 322 1.3E-18 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JDM601_0478 54f6cb83d314910c41a80ab8b66f24bc 393 PRINTS PR00344 Bacterial sensor protein C-terminal signature 367 380 1.3E-18 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JDM601_0478 54f6cb83d314910c41a80ab8b66f24bc 393 PRINTS PR00344 Bacterial sensor protein C-terminal signature 343 361 1.3E-18 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JDM601_0478 54f6cb83d314910c41a80ab8b66f24bc 393 Pfam PF00512 His Kinase A (phospho-acceptor) domain 160 225 1.0E-12 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JDM601_0478 54f6cb83d314910c41a80ab8b66f24bc 393 SUPERFAMILY SSF55874 216 382 2.49E-44 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JDM601_0478 54f6cb83d314910c41a80ab8b66f24bc 393 SMART SM00387 271 383 2.4E-36 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JDM601_0478 54f6cb83d314910c41a80ab8b66f24bc 393 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 271 381 2.5E-22 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JDM601_2691 eda972e280b609008691c097f6748c1e 475 ProSitePatterns PS00450 Aconitase family signature 1. 348 364 - T 12-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 JDM601_2691 eda972e280b609008691c097f6748c1e 475 PRINTS PR00415 Aconitase family signature 128 141 3.3E-47 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 JDM601_2691 eda972e280b609008691c097f6748c1e 475 PRINTS PR00415 Aconitase family signature 91 104 3.3E-47 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 JDM601_2691 eda972e280b609008691c097f6748c1e 475 PRINTS PR00415 Aconitase family signature 142 157 3.3E-47 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 JDM601_2691 eda972e280b609008691c097f6748c1e 475 PRINTS PR00415 Aconitase family signature 218 231 3.3E-47 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 JDM601_2691 eda972e280b609008691c097f6748c1e 475 PRINTS PR00415 Aconitase family signature 204 217 3.3E-47 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 JDM601_2691 eda972e280b609008691c097f6748c1e 475 PRINTS PR00415 Aconitase family signature 117 125 3.3E-47 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 JDM601_2691 eda972e280b609008691c097f6748c1e 475 PRINTS PR00415 Aconitase family signature 295 309 3.3E-47 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 JDM601_2691 eda972e280b609008691c097f6748c1e 475 PRINTS PR00415 Aconitase family signature 352 363 3.3E-47 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 JDM601_2691 eda972e280b609008691c097f6748c1e 475 PRINTS PR00415 Aconitase family signature 408 421 3.3E-47 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 JDM601_2691 eda972e280b609008691c097f6748c1e 475 Gene3D G3DSA:3.30.499.20 12 295 2.0E-96 T 12-10-2018 JDM601_2691 eda972e280b609008691c097f6748c1e 475 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 9 475 59.519 T 12-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 JDM601_2691 eda972e280b609008691c097f6748c1e 475 Gene3D G3DSA:3.30.499.10 334 475 9.6E-51 T 12-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 JDM601_2691 eda972e280b609008691c097f6748c1e 475 SUPERFAMILY SSF53732 8 473 4.32E-161 T 12-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 JDM601_2691 eda972e280b609008691c097f6748c1e 475 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 10 468 2.4E-219 T 12-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 JDM601_2691 eda972e280b609008691c097f6748c1e 475 Pfam PF00330 Aconitase family (aconitate hydratase) 15 466 1.1E-156 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 JDM601_2691 eda972e280b609008691c097f6748c1e 475 ProSitePatterns PS01244 Aconitase family signature 2. 408 421 - T 12-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 JDM601_0635 f6ab6528af941885dc103968fd6be338 556 Pfam PF02562 PhoH-like protein 204 246 1.4E-4 T 12-10-2018 IPR003714 PhoH-like protein GO:0005524 JDM601_0635 f6ab6528af941885dc103968fd6be338 556 Gene3D G3DSA:3.40.50.300 195 381 5.7E-19 T 12-10-2018 JDM601_0635 f6ab6528af941885dc103968fd6be338 556 Gene3D G3DSA:3.40.50.300 382 544 1.5E-8 T 12-10-2018 JDM601_0635 f6ab6528af941885dc103968fd6be338 556 Pfam PF08378 Nuclease-related domain 15 123 1.0E-10 T 12-10-2018 IPR011528 Nuclease-related domain, NERD JDM601_0635 f6ab6528af941885dc103968fd6be338 556 SUPERFAMILY SSF52540 204 530 4.17E-35 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_0635 f6ab6528af941885dc103968fd6be338 556 Pfam PF13538 UvrD-like helicase C-terminal domain 483 526 2.3E-7 T 12-10-2018 IPR027785 UvrD-like helicase C-terminal domain JDM601_3402 3052521b665a4935049419a6d052773b 488 Gene3D G3DSA:3.30.300.30 383 486 1.7E-24 T 12-10-2018 JDM601_3402 3052521b665a4935049419a6d052773b 488 Gene3D G3DSA:3.40.50.12780 4 382 2.3E-56 T 12-10-2018 JDM601_3402 3052521b665a4935049419a6d052773b 488 SUPERFAMILY SSF56801 4 481 5.1E-94 T 12-10-2018 JDM601_3402 3052521b665a4935049419a6d052773b 488 Pfam PF13193 AMP-binding enzyme C-terminal domain 399 470 7.5E-15 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain JDM601_3402 3052521b665a4935049419a6d052773b 488 Pfam PF00501 AMP-binding enzyme 14 386 5.0E-46 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 JDM601_0802 c4a3cb979671219815a0e5c450617ce4 528 Pfam PF07690 Major Facilitator Superfamily 100 465 2.6E-13 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 JDM601_0802 c4a3cb979671219815a0e5c450617ce4 528 SUPERFAMILY SSF103473 93 489 5.84E-13 T 12-10-2018 IPR036259 MFS transporter superfamily JDM601_0802 c4a3cb979671219815a0e5c450617ce4 528 Gene3D G3DSA:1.20.1250.20 87 496 3.0E-16 T 12-10-2018 JDM601_0006 443fcbbc801b11f0b299bf63da37c559 1251 PRINTS PR00379 Intein signature 352 364 6.7E-11 T 12-10-2018 IPR006142 Intein GO:0016539 JDM601_0006 443fcbbc801b11f0b299bf63da37c559 1251 PRINTS PR00379 Intein signature 383 398 6.7E-11 T 12-10-2018 IPR006142 Intein GO:0016539 JDM601_0006 443fcbbc801b11f0b299bf63da37c559 1251 PRINTS PR00379 Intein signature 196 209 6.7E-11 T 12-10-2018 IPR006142 Intein GO:0016539 JDM601_0006 443fcbbc801b11f0b299bf63da37c559 1251 PRINTS PR00379 Intein signature 253 265 6.7E-11 T 12-10-2018 IPR006142 Intein GO:0016539 JDM601_0006 443fcbbc801b11f0b299bf63da37c559 1251 PRINTS PR00379 Intein signature 545 554 6.7E-11 T 12-10-2018 IPR006142 Intein GO:0016539 JDM601_0006 443fcbbc801b11f0b299bf63da37c559 1251 SUPERFAMILY SSF55608 338 437 4.82E-13 T 12-10-2018 IPR027434 Homing endonuclease JDM601_0006 443fcbbc801b11f0b299bf63da37c559 1251 SMART SM00305 510 556 1.4E-7 T 12-10-2018 IPR003586 Hint domain C-terminal Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 JDM601_0006 443fcbbc801b11f0b299bf63da37c559 1251 Pfam PF14528 LAGLIDADG-like domain 352 426 4.7E-15 T 12-10-2018 IPR004860 Homing endonuclease, LAGLIDADG GO:0004519 JDM601_0006 443fcbbc801b11f0b299bf63da37c559 1251 Gene3D G3DSA:1.10.268.10 802 890 4.0E-138 T 12-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 JDM601_0006 443fcbbc801b11f0b299bf63da37c559 1251 SUPERFAMILY SSF51294 131 550 6.12E-45 T 12-10-2018 IPR036844 Hint domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 JDM601_0006 443fcbbc801b11f0b299bf63da37c559 1251 Pfam PF14890 Intein splicing domain 181 550 2.8E-12 T 12-10-2018 JDM601_0006 443fcbbc801b11f0b299bf63da37c559 1251 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 1090 1138 1.2E-11 T 12-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 JDM601_0006 443fcbbc801b11f0b299bf63da37c559 1251 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 1043 1087 2.8E-9 T 12-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 JDM601_0006 443fcbbc801b11f0b299bf63da37c559 1251 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 1194 1237 2.0E-10 T 12-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 JDM601_0006 443fcbbc801b11f0b299bf63da37c559 1251 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 986 1029 2.2E-7 T 12-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 JDM601_0006 443fcbbc801b11f0b299bf63da37c559 1251 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 1143 1190 3.9E-10 T 12-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 JDM601_0006 443fcbbc801b11f0b299bf63da37c559 1251 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 936 983 7.1E-12 T 12-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 JDM601_0006 443fcbbc801b11f0b299bf63da37c559 1251 Gene3D G3DSA:3.90.199.10 551 919 4.0E-138 T 12-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 JDM601_0006 443fcbbc801b11f0b299bf63da37c559 1251 TIGRFAM TIGR01443 intein_Cterm: intein C-terminal splicing region 529 551 4.4E-5 T 12-10-2018 IPR030934 Intein C-terminal splicing region JDM601_0006 443fcbbc801b11f0b299bf63da37c559 1251 SMART SM00434 502 897 2.0E-149 T 12-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 JDM601_0006 443fcbbc801b11f0b299bf63da37c559 1251 SMART SM00306 129 237 6.3E-17 T 12-10-2018 IPR003587 Hint domain N-terminal Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 JDM601_0006 443fcbbc801b11f0b299bf63da37c559 1251 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 550 1239 1.2E-284 T 12-10-2018 JDM601_0006 443fcbbc801b11f0b299bf63da37c559 1251 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 40 131 1.8E-41 T 12-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 JDM601_0006 443fcbbc801b11f0b299bf63da37c559 1251 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 551 903 1.1E-95 T 12-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 JDM601_0006 443fcbbc801b11f0b299bf63da37c559 1251 SUPERFAMILY SSF56719 12 131 1.23E-53 T 12-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 JDM601_0006 443fcbbc801b11f0b299bf63da37c559 1251 Gene3D G3DSA:3.10.28.10 255 419 4.4E-24 T 12-10-2018 IPR027434 Homing endonuclease JDM601_0006 443fcbbc801b11f0b299bf63da37c559 1251 Gene3D G3DSA:3.30.1360.40 668 765 4.0E-138 T 12-10-2018 JDM601_0006 443fcbbc801b11f0b299bf63da37c559 1251 Gene3D G3DSA:2.120.10.90 933 1241 8.3E-127 T 12-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal JDM601_0006 443fcbbc801b11f0b299bf63da37c559 1251 Gene3D G3DSA:3.90.199.10 13 134 5.7E-57 T 12-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 JDM601_0006 443fcbbc801b11f0b299bf63da37c559 1251 Gene3D G3DSA:2.170.16.10 135 254 1.2E-34 T 12-10-2018 JDM601_0006 443fcbbc801b11f0b299bf63da37c559 1251 Gene3D G3DSA:2.170.16.10 477 549 1.1E-18 T 12-10-2018 JDM601_0006 443fcbbc801b11f0b299bf63da37c559 1251 SUPERFAMILY SSF101904 931 1247 1.44E-101 T 12-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal JDM601_0006 443fcbbc801b11f0b299bf63da37c559 1251 SUPERFAMILY SSF56719 551 920 1.57E-111 T 12-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 JDM601_0006 443fcbbc801b11f0b299bf63da37c559 1251 TIGRFAM TIGR01445 intein_Nterm: intein N-terminal splicing region 131 208 7.0E-10 T 12-10-2018 IPR006141 Intein N-terminal splicing region GO:0016539 Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 JDM601_0235 244afc52bcb06ef5440ce63386c2d0a8 640 SUPERFAMILY SSF51905 4 477 1.5E-69 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_0235 244afc52bcb06ef5440ce63386c2d0a8 640 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 11 30 7.3E-6 T 12-10-2018 JDM601_0235 244afc52bcb06ef5440ce63386c2d0a8 640 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 398 420 7.3E-6 T 12-10-2018 JDM601_0235 244afc52bcb06ef5440ce63386c2d0a8 640 PIRSF PIRSF000171 1 609 5.5E-37 T 12-10-2018 JDM601_0235 244afc52bcb06ef5440ce63386c2d0a8 640 Gene3D G3DSA:3.50.50.60 10 445 3.6E-146 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_0235 244afc52bcb06ef5440ce63386c2d0a8 640 SUPERFAMILY SSF46977 484 636 1.7E-42 T 12-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 JDM601_0235 244afc52bcb06ef5440ce63386c2d0a8 640 Gene3D G3DSA:3.90.700.10 258 400 3.6E-146 T 12-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 JDM601_0235 244afc52bcb06ef5440ce63386c2d0a8 640 Gene3D G3DSA:1.20.58.100 473 577 7.5E-29 T 12-10-2018 JDM601_0235 244afc52bcb06ef5440ce63386c2d0a8 640 Pfam PF02910 Fumarate reductase flavoprotein C-term 491 602 2.4E-24 T 12-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 JDM601_0235 244afc52bcb06ef5440ce63386c2d0a8 640 Pfam PF00890 FAD binding domain 10 434 3.0E-88 T 12-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 JDM601_0235 244afc52bcb06ef5440ce63386c2d0a8 640 SUPERFAMILY SSF56425 248 394 3.29E-31 T 12-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 JDM601_3439 063f48d13905796540947e6d9abf6f6d 65 PRINTS PR00352 3Fe-4S ferredoxin signature 16 26 2.8E-5 T 12-10-2018 IPR001080 3Fe-4S ferredoxin GO:0005506|GO:0009055 JDM601_3439 063f48d13905796540947e6d9abf6f6d 65 PRINTS PR00352 3Fe-4S ferredoxin signature 5 16 2.8E-5 T 12-10-2018 IPR001080 3Fe-4S ferredoxin GO:0005506|GO:0009055 JDM601_3439 063f48d13905796540947e6d9abf6f6d 65 PRINTS PR00352 3Fe-4S ferredoxin signature 48 60 2.8E-5 T 12-10-2018 IPR001080 3Fe-4S ferredoxin GO:0005506|GO:0009055 JDM601_3439 063f48d13905796540947e6d9abf6f6d 65 SUPERFAMILY SSF54862 2 64 1.08E-13 T 12-10-2018 JDM601_3439 063f48d13905796540947e6d9abf6f6d 65 Gene3D G3DSA:3.30.70.20 1 65 1.0E-20 T 12-10-2018 JDM601_3439 063f48d13905796540947e6d9abf6f6d 65 Pfam PF13370 4Fe-4S single cluster domain of Ferredoxin I 6 61 7.1E-14 T 12-10-2018 JDM601_2535 da699a91a7159e5dbc67c40a1e4d94c8 757 SUPERFAMILY SSF54211 14 156 8.1E-45 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold JDM601_2535 da699a91a7159e5dbc67c40a1e4d94c8 757 Pfam PF00575 S1 RNA binding domain 661 730 3.3E-14 T 12-10-2018 IPR003029 S1 domain GO:0003676 JDM601_2535 da699a91a7159e5dbc67c40a1e4d94c8 757 Gene3D G3DSA:3.30.230.70 271 590 3.2E-106 T 12-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 JDM601_2535 da699a91a7159e5dbc67c40a1e4d94c8 757 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 22 731 3.0E-268 T 12-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 JDM601_2535 da699a91a7159e5dbc67c40a1e4d94c8 757 SUPERFAMILY SSF55666 483 586 2.14E-23 T 12-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 JDM601_2535 da699a91a7159e5dbc67c40a1e4d94c8 757 TIGRFAM TIGR02696 pppGpp_PNP: guanosine pentaphosphate synthetase I/polyribonucleotide nucleotidyltransferase 10 732 0.0 T 12-10-2018 IPR014069 Guanosine pentaphosphate synthetase I/polyribonucleotide nucleotidyltransferase GO:0004654|GO:0005737|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 JDM601_2535 da699a91a7159e5dbc67c40a1e4d94c8 757 SMART SM00322 592 657 6.5E-12 T 12-10-2018 IPR004087 K Homology domain GO:0003676 JDM601_2535 da699a91a7159e5dbc67c40a1e4d94c8 757 SUPERFAMILY SSF54791 595 681 1.57E-18 T 12-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 JDM601_2535 da699a91a7159e5dbc67c40a1e4d94c8 757 SUPERFAMILY SSF54211 330 501 6.58E-45 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold JDM601_2535 da699a91a7159e5dbc67c40a1e4d94c8 757 Pfam PF00013 KH domain 596 653 1.1E-10 T 12-10-2018 IPR004088 K Homology domain, type 1 GO:0003723 JDM601_2535 da699a91a7159e5dbc67c40a1e4d94c8 757 SUPERFAMILY SSF55666 157 269 9.64E-26 T 12-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 JDM601_2535 da699a91a7159e5dbc67c40a1e4d94c8 757 Gene3D G3DSA:2.40.50.140 591 715 2.3E-48 T 12-10-2018 JDM601_2535 da699a91a7159e5dbc67c40a1e4d94c8 757 SUPERFAMILY SSF50249 660 730 2.76E-15 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold JDM601_2535 da699a91a7159e5dbc67c40a1e4d94c8 757 SMART SM00316 662 733 4.2E-17 T 12-10-2018 IPR022967 RNA-binding domain, S1 JDM601_2535 da699a91a7159e5dbc67c40a1e4d94c8 757 PIRSF PIRSF005499 12 756 2.5E-289 T 12-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 JDM601_2535 da699a91a7159e5dbc67c40a1e4d94c8 757 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 14 736 27.127 T 12-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 JDM601_2535 da699a91a7159e5dbc67c40a1e4d94c8 757 SUPERFAMILY SSF46915 273 353 8.11E-19 T 12-10-2018 IPR036456 Polyribonucleotide nucleotidyltransferase, RNA-binding domain superfamily GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 JDM601_2535 da699a91a7159e5dbc67c40a1e4d94c8 757 Pfam PF01138 3' exoribonuclease family, domain 1 25 156 2.7E-17 T 12-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 JDM601_2535 da699a91a7159e5dbc67c40a1e4d94c8 757 Pfam PF01138 3' exoribonuclease family, domain 1 357 489 8.3E-19 T 12-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 JDM601_2535 da699a91a7159e5dbc67c40a1e4d94c8 757 Gene3D G3DSA:3.30.230.70 10 259 2.9E-85 T 12-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 JDM601_2535 da699a91a7159e5dbc67c40a1e4d94c8 757 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 276 352 1.7E-21 T 12-10-2018 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 JDM601_0015 4dcd41958b9651c3bf663a76d3b52ddd 227 Gene3D G3DSA:3.40.50.880 1 197 1.3E-60 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like JDM601_0015 4dcd41958b9651c3bf663a76d3b52ddd 227 PRINTS PR00097 Anthranilate synthase component II signature 171 184 1.8E-35 T 12-10-2018 JDM601_0015 4dcd41958b9651c3bf663a76d3b52ddd 227 PRINTS PR00097 Anthranilate synthase component II signature 53 62 1.8E-35 T 12-10-2018 JDM601_0015 4dcd41958b9651c3bf663a76d3b52ddd 227 PRINTS PR00097 Anthranilate synthase component II signature 81 92 1.8E-35 T 12-10-2018 JDM601_0015 4dcd41958b9651c3bf663a76d3b52ddd 227 PRINTS PR00097 Anthranilate synthase component II signature 106 114 1.8E-35 T 12-10-2018 JDM601_0015 4dcd41958b9651c3bf663a76d3b52ddd 227 PRINTS PR00097 Anthranilate synthase component II signature 3 17 1.8E-35 T 12-10-2018 JDM601_0015 4dcd41958b9651c3bf663a76d3b52ddd 227 PRINTS PR00097 Anthranilate synthase component II signature 126 138 1.8E-35 T 12-10-2018 JDM601_0015 4dcd41958b9651c3bf663a76d3b52ddd 227 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 50 64 6.1E-10 T 12-10-2018 JDM601_0015 4dcd41958b9651c3bf663a76d3b52ddd 227 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 81 97 6.1E-10 T 12-10-2018 JDM601_0015 4dcd41958b9651c3bf663a76d3b52ddd 227 SUPERFAMILY SSF52317 2 194 2.66E-54 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like JDM601_0015 4dcd41958b9651c3bf663a76d3b52ddd 227 PRINTS PR00096 Glutamine amidotransferase superfamily signature 81 92 2.8E-14 T 12-10-2018 JDM601_0015 4dcd41958b9651c3bf663a76d3b52ddd 227 PRINTS PR00096 Glutamine amidotransferase superfamily signature 171 184 2.8E-14 T 12-10-2018 JDM601_0015 4dcd41958b9651c3bf663a76d3b52ddd 227 PRINTS PR00096 Glutamine amidotransferase superfamily signature 53 62 2.8E-14 T 12-10-2018 JDM601_0015 4dcd41958b9651c3bf663a76d3b52ddd 227 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 3 193 2.4E-61 T 12-10-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 JDM601_0015 4dcd41958b9651c3bf663a76d3b52ddd 227 Pfam PF00117 Glutamine amidotransferase class-I 5 191 9.1E-50 T 12-10-2018 IPR017926 Glutamine amidotransferase JDM601_0255 c40b605a3515cdd62a6c4df0d706814b 253 SUPERFAMILY SSF51735 10 252 2.04E-84 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_0255 c40b605a3515cdd62a6c4df0d706814b 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 181 198 9.5E-44 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0255 c40b605a3515cdd62a6c4df0d706814b 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 9.5E-44 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0255 c40b605a3515cdd62a6c4df0d706814b 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 87 98 9.5E-44 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0255 c40b605a3515cdd62a6c4df0d706814b 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 9.5E-44 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0255 c40b605a3515cdd62a6c4df0d706814b 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 9.5E-44 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0255 c40b605a3515cdd62a6c4df0d706814b 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 13 30 9.5E-44 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0255 c40b605a3515cdd62a6c4df0d706814b 253 Gene3D G3DSA:3.40.50.720 1 253 1.6E-84 T 12-10-2018 JDM601_0255 c40b605a3515cdd62a6c4df0d706814b 253 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 146 174 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 JDM601_0255 c40b605a3515cdd62a6c4df0d706814b 253 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 12 191 4.1E-5 T 12-10-2018 JDM601_0255 c40b605a3515cdd62a6c4df0d706814b 253 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 18 251 1.2E-67 T 12-10-2018 JDM601_0255 c40b605a3515cdd62a6c4df0d706814b 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 87 98 2.2E-13 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0255 c40b605a3515cdd62a6c4df0d706814b 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 159 178 2.2E-13 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0255 c40b605a3515cdd62a6c4df0d706814b 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 2.2E-13 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3362 a2525e8f162e3c4c37aa87f2864861b2 261 Pfam PF00106 short chain dehydrogenase 7 120 7.9E-9 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3362 a2525e8f162e3c4c37aa87f2864861b2 261 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 151 249 5.7E-18 T 12-10-2018 JDM601_3362 a2525e8f162e3c4c37aa87f2864861b2 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 1.3E-21 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3362 a2525e8f162e3c4c37aa87f2864861b2 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 1.3E-21 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3362 a2525e8f162e3c4c37aa87f2864861b2 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 1.3E-21 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3362 a2525e8f162e3c4c37aa87f2864861b2 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 213 233 1.3E-21 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3362 a2525e8f162e3c4c37aa87f2864861b2 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 104 120 1.3E-21 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3362 a2525e8f162e3c4c37aa87f2864861b2 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 67 78 1.3E-21 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3362 a2525e8f162e3c4c37aa87f2864861b2 261 Gene3D G3DSA:3.40.50.720 2 256 1.5E-41 T 12-10-2018 JDM601_3362 a2525e8f162e3c4c37aa87f2864861b2 261 SUPERFAMILY SSF51735 6 252 7.94E-42 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_1330 70cf05d88e12fc8397d18055b0f1fef4 859 Gene3D G3DSA:3.40.50.2000 488 666 1.2E-35 T 12-10-2018 JDM601_1330 70cf05d88e12fc8397d18055b0f1fef4 859 SUPERFAMILY SSF53756 4 721 2.08E-197 T 12-10-2018 JDM601_1330 70cf05d88e12fc8397d18055b0f1fef4 859 PIRSF PIRSF000460 1 802 1.8E-261 T 12-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 JDM601_1330 70cf05d88e12fc8397d18055b0f1fef4 859 TIGRFAM TIGR02094 more_P_ylases: alpha-glucan phosphorylases 110 712 3.9E-231 T 12-10-2018 IPR011834 Alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238 JDM601_1330 70cf05d88e12fc8397d18055b0f1fef4 859 ProSitePatterns PS00102 Phosphorylase pyridoxal-phosphate attachment site. 601 613 - T 12-10-2018 IPR035090 Phosphorylase pyridoxal-phosphate attachment site KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 JDM601_1330 70cf05d88e12fc8397d18055b0f1fef4 859 Gene3D G3DSA:3.40.50.2000 210 420 5.0E-14 T 12-10-2018 JDM601_1330 70cf05d88e12fc8397d18055b0f1fef4 859 Pfam PF11897 Protein of unknown function (DUF3417) 13 123 5.4E-37 T 12-10-2018 IPR024517 Glycogen phosphorylase, domain of unknown function DUF3417 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238 JDM601_1330 70cf05d88e12fc8397d18055b0f1fef4 859 Gene3D G3DSA:3.40.50.2000 120 182 1.1E-10 T 12-10-2018 JDM601_1330 70cf05d88e12fc8397d18055b0f1fef4 859 Pfam PF00343 Carbohydrate phosphorylase 508 623 3.8E-10 T 12-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 JDM601_1330 70cf05d88e12fc8397d18055b0f1fef4 859 Pfam PF00343 Carbohydrate phosphorylase 128 173 1.6E-5 T 12-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 JDM601_1330 70cf05d88e12fc8397d18055b0f1fef4 859 Pfam PF00343 Carbohydrate phosphorylase 267 340 1.7E-5 T 12-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 JDM601_3680 e1c442f9ec1ee9ea9877484c0c93ed09 309 Gene3D G3DSA:3.30.360.10 127 277 4.3E-129 T 12-10-2018 JDM601_3680 e1c442f9ec1ee9ea9877484c0c93ed09 309 Hamap MF_01657 Acetaldehyde dehydrogenase [mhpF]. 1 309 138.879 T 12-10-2018 IPR003361 Acetaldehyde dehydrogenase GO:0008774|GO:0019439|GO:0055114 KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00650+1.2.1.10|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-6587|MetaCyc: PWY-7085|MetaCyc: PWY-7180 JDM601_3680 e1c442f9ec1ee9ea9877484c0c93ed09 309 SUPERFAMILY SSF51735 3 140 6.66E-23 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_3680 e1c442f9ec1ee9ea9877484c0c93ed09 309 SUPERFAMILY SSF55347 127 277 1.9E-56 T 12-10-2018 JDM601_3680 e1c442f9ec1ee9ea9877484c0c93ed09 309 SMART SM00859 6 119 3.9E-6 T 12-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 JDM601_3680 e1c442f9ec1ee9ea9877484c0c93ed09 309 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 7 116 5.6E-9 T 12-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 JDM601_3680 e1c442f9ec1ee9ea9877484c0c93ed09 309 Pfam PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation 127 277 1.5E-60 T 12-10-2018 IPR015426 Acetaldehyde dehydrogenase, C-terminal GO:0008774|GO:0019439|GO:0055114 KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00650+1.2.1.10|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-6587|MetaCyc: PWY-7085|MetaCyc: PWY-7180 JDM601_3680 e1c442f9ec1ee9ea9877484c0c93ed09 309 TIGRFAM TIGR03215 ac_ald_DH_ac: acetaldehyde dehydrogenase (acetylating) 4 301 1.2E-132 T 12-10-2018 IPR003361 Acetaldehyde dehydrogenase GO:0008774|GO:0019439|GO:0055114 KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00650+1.2.1.10|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-6587|MetaCyc: PWY-7085|MetaCyc: PWY-7180 JDM601_3680 e1c442f9ec1ee9ea9877484c0c93ed09 309 PIRSF PIRSF015689 1 307 6.6E-133 T 12-10-2018 IPR003361 Acetaldehyde dehydrogenase GO:0008774|GO:0019439|GO:0055114 KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00650+1.2.1.10|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-6587|MetaCyc: PWY-7085|MetaCyc: PWY-7180 JDM601_3680 e1c442f9ec1ee9ea9877484c0c93ed09 309 Gene3D G3DSA:3.40.50.720 7 297 4.3E-129 T 12-10-2018 JDM601_4200 c466ffd999aa01b9ef48929137f552bd 280 Gene3D G3DSA:3.20.20.30 4 278 9.3E-46 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 JDM601_4200 c466ffd999aa01b9ef48929137f552bd 280 SUPERFAMILY SSF51679 6 279 4.42E-46 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 JDM601_4200 c466ffd999aa01b9ef48929137f552bd 280 Pfam PF00296 Luciferase-like monooxygenase 13 199 1.3E-33 T 12-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 JDM601_1450 4741f1945316f33b3ee4c852853a9d39 418 SMART SM01086 309 399 7.8E-33 T 12-10-2018 IPR019489 Clp ATPase, C-terminal JDM601_1450 4741f1945316f33b3ee4c852853a9d39 418 Gene3D G3DSA:3.40.50.300 45 306 2.2E-106 T 12-10-2018 JDM601_1450 4741f1945316f33b3ee4c852853a9d39 418 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 309 387 9.3E-17 T 12-10-2018 IPR019489 Clp ATPase, C-terminal JDM601_1450 4741f1945316f33b3ee4c852853a9d39 418 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 2 407 51.969 T 12-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 JDM601_1450 4741f1945316f33b3ee4c852853a9d39 418 SUPERFAMILY SSF57716 2 37 1.33E-11 T 12-10-2018 JDM601_1450 4741f1945316f33b3ee4c852853a9d39 418 Gene3D G3DSA:3.30.50.30 1 41 1.2E-22 T 12-10-2018 IPR038366 Zinc finger, ClpX C4-type superfamily JDM601_1450 4741f1945316f33b3ee4c852853a9d39 418 Pfam PF07724 AAA domain (Cdc48 subfamily) 106 302 4.9E-50 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 JDM601_1450 4741f1945316f33b3ee4c852853a9d39 418 SMART SM00382 105 261 1.4E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain JDM601_1450 4741f1945316f33b3ee4c852853a9d39 418 SMART SM00994 1 40 1.1E-23 T 12-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 JDM601_1450 4741f1945316f33b3ee4c852853a9d39 418 SUPERFAMILY SSF52540 50 396 4.3E-75 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_1450 4741f1945316f33b3ee4c852853a9d39 418 Gene3D G3DSA:1.10.8.60 308 416 6.0E-38 T 12-10-2018 JDM601_1450 4741f1945316f33b3ee4c852853a9d39 418 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 2 403 4.5E-195 T 12-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 JDM601_1450 4741f1945316f33b3ee4c852853a9d39 418 Pfam PF06689 ClpX C4-type zinc finger 3 39 1.7E-20 T 12-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 JDM601_0153 5d6ec54bee590998d5ba6522944ab427 133 TIGRFAM TIGR04338 HEXXH_Rv0185: putative metallohydrolase, TIGR04338 family 1 132 9.0E-57 T 12-10-2018 IPR027595 Conserved hypothetical protein CHP04338 JDM601_0379 0ef86683ec3d80a6e75647963f617e7b 241 Pfam PF00753 Metallo-beta-lactamase superfamily 11 219 3.5E-37 T 12-10-2018 IPR001279 Metallo-beta-lactamase JDM601_0379 0ef86683ec3d80a6e75647963f617e7b 241 SMART SM00849 12 219 2.3E-26 T 12-10-2018 IPR001279 Metallo-beta-lactamase JDM601_0379 0ef86683ec3d80a6e75647963f617e7b 241 Gene3D G3DSA:3.60.15.10 1 237 4.4E-44 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like JDM601_0379 0ef86683ec3d80a6e75647963f617e7b 241 SUPERFAMILY SSF56281 5 233 2.88E-39 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like JDM601_0890 28c8c9e68980ba03626d7da679639a13 287 Gene3D G3DSA:3.20.190.10 1 107 4.9E-14 T 12-10-2018 IPR035937 MutM-like, N-terminal JDM601_0890 28c8c9e68980ba03626d7da679639a13 287 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 139 220 2.9E-18 T 12-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 JDM601_0890 28c8c9e68980ba03626d7da679639a13 287 SUPERFAMILY SSF81624 2 144 5.94E-23 T 12-10-2018 IPR035937 MutM-like, N-terminal JDM601_0890 28c8c9e68980ba03626d7da679639a13 287 SMART SM00898 2 125 7.4E-24 T 12-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 JDM601_0890 28c8c9e68980ba03626d7da679639a13 287 Pfam PF06827 Zinc finger found in FPG and IleRS 244 271 2.7E-7 T 12-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 JDM601_0890 28c8c9e68980ba03626d7da679639a13 287 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 86 2.4E-14 T 12-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 JDM601_0890 28c8c9e68980ba03626d7da679639a13 287 Gene3D G3DSA:1.10.8.50 141 272 9.1E-34 T 12-10-2018 JDM601_0890 28c8c9e68980ba03626d7da679639a13 287 SUPERFAMILY SSF57716 228 272 5.13E-11 T 12-10-2018 JDM601_0890 28c8c9e68980ba03626d7da679639a13 287 SMART SM01232 139 229 2.7E-27 T 12-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 JDM601_0890 28c8c9e68980ba03626d7da679639a13 287 SUPERFAMILY SSF46946 139 219 1.57E-20 T 12-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 JDM601_1383 80104a1dd5fcd5d4fbba95101ae515db 3091 Gene3D G3DSA:3.90.25.70 1651 1746 2.4E-24 T 12-10-2018 JDM601_1383 80104a1dd5fcd5d4fbba95101ae515db 3091 SUPERFAMILY SSF51412 400 670 2.66E-17 T 12-10-2018 JDM601_1383 80104a1dd5fcd5d4fbba95101ae515db 3091 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 1350 1810 1.7E-5 T 12-10-2018 IPR020801 Polyketide synthase, acyl transferase domain JDM601_1383 80104a1dd5fcd5d4fbba95101ae515db 3091 SMART SM00825 Beta-ketoacyl synthase 2596 3003 6.1E-4 T 12-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain JDM601_1383 80104a1dd5fcd5d4fbba95101ae515db 3091 SUPERFAMILY SSF51735 2137 2377 3.3E-8 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_1383 80104a1dd5fcd5d4fbba95101ae515db 3091 SUPERFAMILY SSF53901 2607 2837 2.2E-29 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 JDM601_1383 80104a1dd5fcd5d4fbba95101ae515db 3091 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 2597 2828 3.5E-37 T 12-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal JDM601_1383 80104a1dd5fcd5d4fbba95101ae515db 3091 Pfam PF01575 MaoC like domain 1209 1329 9.8E-25 T 12-10-2018 IPR002539 MaoC-like dehydratase domain JDM601_1383 80104a1dd5fcd5d4fbba95101ae515db 3091 Gene3D G3DSA:3.30.70.250 188 271 4.9E-16 T 12-10-2018 JDM601_1383 80104a1dd5fcd5d4fbba95101ae515db 3091 Gene3D G3DSA:3.40.366.10 1341 1499 5.5E-24 T 12-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 JDM601_1383 80104a1dd5fcd5d4fbba95101ae515db 3091 PRINTS PR01483 Fatty acid synthase signature 735 753 5.4E-101 T 12-10-2018 IPR003965 Fatty acid synthase GO:0004312|GO:0005835|GO:0006633|GO:0055114 JDM601_1383 80104a1dd5fcd5d4fbba95101ae515db 3091 PRINTS PR01483 Fatty acid synthase signature 1441 1460 5.4E-101 T 12-10-2018 IPR003965 Fatty acid synthase GO:0004312|GO:0005835|GO:0006633|GO:0055114 JDM601_1383 80104a1dd5fcd5d4fbba95101ae515db 3091 PRINTS PR01483 Fatty acid synthase signature 414 434 5.4E-101 T 12-10-2018 IPR003965 Fatty acid synthase GO:0004312|GO:0005835|GO:0006633|GO:0055114 JDM601_1383 80104a1dd5fcd5d4fbba95101ae515db 3091 PRINTS PR01483 Fatty acid synthase signature 440 458 5.4E-101 T 12-10-2018 IPR003965 Fatty acid synthase GO:0004312|GO:0005835|GO:0006633|GO:0055114 JDM601_1383 80104a1dd5fcd5d4fbba95101ae515db 3091 PRINTS PR01483 Fatty acid synthase signature 545 563 5.4E-101 T 12-10-2018 IPR003965 Fatty acid synthase GO:0004312|GO:0005835|GO:0006633|GO:0055114 JDM601_1383 80104a1dd5fcd5d4fbba95101ae515db 3091 PRINTS PR01483 Fatty acid synthase signature 1477 1498 5.4E-101 T 12-10-2018 IPR003965 Fatty acid synthase GO:0004312|GO:0005835|GO:0006633|GO:0055114 JDM601_1383 80104a1dd5fcd5d4fbba95101ae515db 3091 PRINTS PR01483 Fatty acid synthase signature 1339 1358 5.4E-101 T 12-10-2018 IPR003965 Fatty acid synthase GO:0004312|GO:0005835|GO:0006633|GO:0055114 JDM601_1383 80104a1dd5fcd5d4fbba95101ae515db 3091 PRINTS PR01483 Fatty acid synthase signature 847 871 5.4E-101 T 12-10-2018 IPR003965 Fatty acid synthase GO:0004312|GO:0005835|GO:0006633|GO:0055114 JDM601_1383 80104a1dd5fcd5d4fbba95101ae515db 3091 PRINTS PR01483 Fatty acid synthase signature 565 584 5.4E-101 T 12-10-2018 IPR003965 Fatty acid synthase GO:0004312|GO:0005835|GO:0006633|GO:0055114 JDM601_1383 80104a1dd5fcd5d4fbba95101ae515db 3091 PRINTS PR01483 Fatty acid synthase signature 1360 1383 5.4E-101 T 12-10-2018 IPR003965 Fatty acid synthase GO:0004312|GO:0005835|GO:0006633|GO:0055114 JDM601_1383 80104a1dd5fcd5d4fbba95101ae515db 3091 PRINTS PR01483 Fatty acid synthase signature 1226 1248 5.4E-101 T 12-10-2018 IPR003965 Fatty acid synthase GO:0004312|GO:0005835|GO:0006633|GO:0055114 JDM601_1383 80104a1dd5fcd5d4fbba95101ae515db 3091 SUPERFAMILY SSF54637 1224 1341 2.05E-18 T 12-10-2018 IPR029069 HotDog domain superfamily JDM601_1383 80104a1dd5fcd5d4fbba95101ae515db 3091 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 2839 2963 1.1E-27 T 12-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal JDM601_1383 80104a1dd5fcd5d4fbba95101ae515db 3091 Gene3D G3DSA:3.40.50.720 2110 2438 3.1E-112 T 12-10-2018 JDM601_1383 80104a1dd5fcd5d4fbba95101ae515db 3091 SUPERFAMILY SSF52151 1346 1719 2.51E-30 T 12-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase JDM601_1383 80104a1dd5fcd5d4fbba95101ae515db 3091 Gene3D G3DSA:3.40.47.10 2439 2574 8.4E-38 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 JDM601_1383 80104a1dd5fcd5d4fbba95101ae515db 3091 Gene3D G3DSA:3.40.47.10 2593 3088 8.3E-119 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 JDM601_1383 80104a1dd5fcd5d4fbba95101ae515db 3091 Gene3D G3DSA:3.10.129.10 1058 1340 6.3E-47 T 12-10-2018 JDM601_1383 80104a1dd5fcd5d4fbba95101ae515db 3091 Gene3D G3DSA:3.40.366.10 37 358 4.9E-16 T 12-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 JDM601_1383 80104a1dd5fcd5d4fbba95101ae515db 3091 SUPERFAMILY SSF53901 2798 3012 2.92E-35 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 JDM601_1383 80104a1dd5fcd5d4fbba95101ae515db 3091 Gene3D G3DSA:1.20.930.70 727 855 1.9E-26 T 12-10-2018 JDM601_1383 80104a1dd5fcd5d4fbba95101ae515db 3091 Pfam PF08354 Domain of unknown function (DUF1729) 853 905 2.0E-19 T 12-10-2018 IPR013565 Domain of unknown function DUF1729 GO:0004318|GO:0055114 KEGG: 00061+2.3.1.39+4.2.1.59+1.3.1.9+3.1.2.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-4381|MetaCyc: PWY-5142|MetaCyc: PWY-5147|MetaCyc: PWY-5366|MetaCyc: PWY-5367|MetaCyc: PWY-5966|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-6799|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7723|MetaCyc: PWY-7746|MetaCyc: PWY-7858|MetaCyc: PWYG-321 JDM601_1383 80104a1dd5fcd5d4fbba95101ae515db 3091 SUPERFAMILY SSF52151 36 373 1.91E-18 T 12-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase JDM601_1383 80104a1dd5fcd5d4fbba95101ae515db 3091 Gene3D G3DSA:3.30.70.2430 1500 1554 3.8E-11 T 12-10-2018 JDM601_1383 80104a1dd5fcd5d4fbba95101ae515db 3091 Gene3D G3DSA:3.20.20.70 393 670 2.7E-113 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JDM601_1383 80104a1dd5fcd5d4fbba95101ae515db 3091 Pfam PF00698 Acyl transferase domain 1348 1547 6.0E-35 T 12-10-2018 IPR014043 Acyl transferase JDM601_2563 4cb4760709c5b59f0c17891dc8f2d629 911 SUPERFAMILY SSF50447 585 668 5.61E-23 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily JDM601_2563 4cb4760709c5b59f0c17891dc8f2d629 911 Gene3D G3DSA:3.40.50.10050 706 813 4.0E-34 T 12-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily JDM601_2563 4cb4760709c5b59f0c17891dc8f2d629 911 Gene3D G3DSA:2.40.30.10 814 911 8.8E-29 T 12-10-2018 JDM601_2563 4cb4760709c5b59f0c17891dc8f2d629 911 SUPERFAMILY SSF50447 813 910 2.04E-26 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily JDM601_2563 4cb4760709c5b59f0c17891dc8f2d629 911 SUPERFAMILY SSF52540 403 574 6.58E-46 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_2563 4cb4760709c5b59f0c17891dc8f2d629 911 Pfam PF00009 Elongation factor Tu GTP binding domain 412 571 3.1E-32 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JDM601_2563 4cb4760709c5b59f0c17891dc8f2d629 911 ProSitePatterns PS01176 Initiation factor 2 signature. 864 886 - T 12-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 JDM601_2563 4cb4760709c5b59f0c17891dc8f2d629 911 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 327 372 2.5E-6 T 12-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal JDM601_2563 4cb4760709c5b59f0c17891dc8f2d629 911 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 3 51 7.6E-14 T 12-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal JDM601_2563 4cb4760709c5b59f0c17891dc8f2d629 911 Gene3D G3DSA:1.10.10.2480 1 67 4.2E-14 T 12-10-2018 JDM601_2563 4cb4760709c5b59f0c17891dc8f2d629 911 Gene3D G3DSA:2.40.30.10 584 702 2.3E-38 T 12-10-2018 JDM601_2563 4cb4760709c5b59f0c17891dc8f2d629 911 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 319 910 2.1E-223 T 12-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 JDM601_2563 4cb4760709c5b59f0c17891dc8f2d629 911 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 409 567 2.4E-32 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 JDM601_2563 4cb4760709c5b59f0c17891dc8f2d629 911 Pfam PF11987 Translation-initiation factor 2 700 802 1.4E-32 T 12-10-2018 IPR023115 Translation initiation factor IF- 2, domain 3 JDM601_2563 4cb4760709c5b59f0c17891dc8f2d629 911 SUPERFAMILY SSF52156 692 819 2.22E-35 T 12-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily JDM601_2563 4cb4760709c5b59f0c17891dc8f2d629 911 Gene3D G3DSA:3.40.50.300 404 583 1.3E-66 T 12-10-2018 JDM601_2563 4cb4760709c5b59f0c17891dc8f2d629 911 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 3 910 16.609 T 12-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 JDM601_2563 4cb4760709c5b59f0c17891dc8f2d629 911 PRINTS PR00315 GTP-binding elongation factor signature 515 524 6.5E-10 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JDM601_2563 4cb4760709c5b59f0c17891dc8f2d629 911 PRINTS PR00315 GTP-binding elongation factor signature 411 424 6.5E-10 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JDM601_2563 4cb4760709c5b59f0c17891dc8f2d629 911 PRINTS PR00315 GTP-binding elongation factor signature 463 473 6.5E-10 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JDM601_2563 4cb4760709c5b59f0c17891dc8f2d629 911 PRINTS PR00315 GTP-binding elongation factor signature 479 490 6.5E-10 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JDM601_3214 899a07d9a31150510b4dad4c3f3e14d7 683 Pfam PF00106 short chain dehydrogenase 381 572 1.2E-45 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3214 899a07d9a31150510b4dad4c3f3e14d7 683 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 530 549 3.4E-11 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3214 899a07d9a31150510b4dad4c3f3e14d7 683 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 504 520 3.4E-11 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3214 899a07d9a31150510b4dad4c3f3e14d7 683 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 455 466 3.4E-11 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3214 899a07d9a31150510b4dad4c3f3e14d7 683 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 381 398 3.4E-11 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3214 899a07d9a31150510b4dad4c3f3e14d7 683 Gene3D G3DSA:3.40.50.720 4 363 7.4E-62 T 12-10-2018 JDM601_3214 899a07d9a31150510b4dad4c3f3e14d7 683 SUPERFAMILY SSF51735 377 597 4.08E-57 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_3214 899a07d9a31150510b4dad4c3f3e14d7 683 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 380 566 3.1E-4 T 12-10-2018 JDM601_3214 899a07d9a31150510b4dad4c3f3e14d7 683 Gene3D G3DSA:3.40.50.720 364 609 5.6E-58 T 12-10-2018 JDM601_3214 899a07d9a31150510b4dad4c3f3e14d7 683 SUPERFAMILY SSF51735 10 289 2.06E-43 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_3214 899a07d9a31150510b4dad4c3f3e14d7 683 Pfam PF07993 Male sterility protein 14 242 2.9E-45 T 12-10-2018 IPR013120 Male sterility, NAD-binding Reactome: R-HSA-8848584 JDM601_1139 987847d0c6c819e07ec3d59babd8c890 183 Gene3D G3DSA:3.30.70.1280 10 98 3.8E-19 T 12-10-2018 JDM601_1139 987847d0c6c819e07ec3d59babd8c890 183 PIRSF PIRSF008502 12 183 6.8E-49 T 12-10-2018 IPR012545 Protein of unknown function DUF1697 JDM601_1139 987847d0c6c819e07ec3d59babd8c890 183 Pfam PF08002 Protein of unknown function (DUF1697) 12 144 1.0E-35 T 12-10-2018 IPR012545 Protein of unknown function DUF1697 JDM601_1139 987847d0c6c819e07ec3d59babd8c890 183 SUPERFAMILY SSF160379 12 182 1.7E-44 T 12-10-2018 JDM601_1582 e56e1f147d9bdd95f68aa44607dd2312 121 SUPERFAMILY SSF55785 12 115 2.37E-14 T 12-10-2018 IPR035965 PAS domain superfamily JDM601_1582 e56e1f147d9bdd95f68aa44607dd2312 121 Gene3D G3DSA:3.30.450.20 11 116 1.0E-13 T 12-10-2018 JDM601_1582 e56e1f147d9bdd95f68aa44607dd2312 121 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 13 116 1.9E-10 T 12-10-2018 IPR000014 PAS domain JDM601_1582 e56e1f147d9bdd95f68aa44607dd2312 121 SMART SM00091 5 74 0.0038 T 12-10-2018 IPR000014 PAS domain JDM601_1582 e56e1f147d9bdd95f68aa44607dd2312 121 Pfam PF13426 PAS domain 18 114 5.4E-13 T 12-10-2018 IPR000014 PAS domain JDM601_3331 fd844416d16fb174cd2c910ad2e0f51c 138 ProSitePatterns PS00701 Ribosomal protein L16 signature 2. 82 93 - T 12-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 JDM601_3331 fd844416d16fb174cd2c910ad2e0f51c 138 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 127 1.0E-53 T 12-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JDM601_3331 fd844416d16fb174cd2c910ad2e0f51c 138 Gene3D G3DSA:3.90.1170.10 1 138 1.0E-49 T 12-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 JDM601_3331 fd844416d16fb174cd2c910ad2e0f51c 138 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 59 70 - T 12-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 JDM601_3331 fd844416d16fb174cd2c910ad2e0f51c 138 PRINTS PR00060 Ribosomal protein L16 signature 58 87 1.9E-37 T 12-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JDM601_3331 fd844416d16fb174cd2c910ad2e0f51c 138 PRINTS PR00060 Ribosomal protein L16 signature 42 53 1.9E-37 T 12-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JDM601_3331 fd844416d16fb174cd2c910ad2e0f51c 138 PRINTS PR00060 Ribosomal protein L16 signature 88 117 1.9E-37 T 12-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JDM601_3331 fd844416d16fb174cd2c910ad2e0f51c 138 PRINTS PR00060 Ribosomal protein L16 signature 24 36 1.9E-37 T 12-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JDM601_3331 fd844416d16fb174cd2c910ad2e0f51c 138 SUPERFAMILY SSF54686 1 135 6.67E-55 T 12-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 JDM601_3331 fd844416d16fb174cd2c910ad2e0f51c 138 Pfam PF00252 Ribosomal protein L16p/L10e 4 132 7.7E-47 T 12-10-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 JDM601_3331 fd844416d16fb174cd2c910ad2e0f51c 138 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 134 37.529 T 12-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JDM601_0141 ed342d5c0f2dd98b24f9a2c65a836d00 272 Pfam PF02405 Permease MlaE 56 259 3.2E-53 T 12-10-2018 IPR030802 ABC transporter permease MalE GO:0043190 JDM601_2643 4ebc49bd138b9ff765f63af441cfa23f 364 Pfam PF13847 Methyltransferase domain 182 324 1.8E-26 T 12-10-2018 IPR025714 Methyltransferase domain JDM601_2643 4ebc49bd138b9ff765f63af441cfa23f 364 Gene3D G3DSA:3.40.50.150 143 363 2.9E-29 T 12-10-2018 JDM601_2643 4ebc49bd138b9ff765f63af441cfa23f 364 SUPERFAMILY SSF53335 144 357 7.63E-31 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JDM601_1991 86ebb56ef462201196ee937c037873de 143 Pfam PF02580 D-Tyr-tRNA(Tyr) deacylase 2 142 2.9E-51 T 12-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 JDM601_1991 86ebb56ef462201196ee937c037873de 143 SUPERFAMILY SSF69500 1 142 2.35E-46 T 12-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily JDM601_1991 86ebb56ef462201196ee937c037873de 143 Hamap MF_00518 D-aminoacyl-tRNA deacylase [dtd]. 1 143 31.249 T 12-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 JDM601_1991 86ebb56ef462201196ee937c037873de 143 TIGRFAM TIGR00256 TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase 2 142 4.4E-43 T 12-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 JDM601_1991 86ebb56ef462201196ee937c037873de 143 Gene3D G3DSA:3.50.80.10 1 143 2.9E-45 T 12-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily JDM601_2484 7c5703c119b77652cf93c1082b547bf0 406 Pfam PF09995 Uncharacterized protein conserved in bacteria (DUF2236) 141 365 1.4E-29 T 12-10-2018 IPR018713 Domain of unknown function DUF2236 JDM601_2088 aaaf6ed6fc57314299cf295fe2547de6 637 TIGRFAM TIGR03061 pip_yhgE_Nterm: YhgE/Pip N-terminal domain 10 169 2.4E-56 T 12-10-2018 IPR017500 Phage infection protein, YhgE, N-terminal JDM601_2088 aaaf6ed6fc57314299cf295fe2547de6 637 Pfam PF12698 ABC-2 family transporter protein 24 162 2.1E-10 T 12-10-2018 JDM601_2088 aaaf6ed6fc57314299cf295fe2547de6 637 Pfam PF12698 ABC-2 family transporter protein 422 617 2.8E-10 T 12-10-2018 JDM601_2088 aaaf6ed6fc57314299cf295fe2547de6 637 TIGRFAM TIGR03062 pip_yhgE_Cterm: YhgE/Pip C-terminal domain 418 624 6.3E-65 T 12-10-2018 IPR017501 Phage infection protein, YhgE, C-terminal JDM601_2088 aaaf6ed6fc57314299cf295fe2547de6 637 TIGRFAM TIGR03057 xxxLxxG_by_4: X-X-X-Leu-X-X-Gly heptad repeats 379 401 9.9E-6 T 12-10-2018 IPR023908 xxxLxxG heptad repeat JDM601_2088 aaaf6ed6fc57314299cf295fe2547de6 637 TIGRFAM TIGR03057 xxxLxxG_by_4: X-X-X-Leu-X-X-Gly heptad repeats 180 206 1.3E-4 T 12-10-2018 IPR023908 xxxLxxG heptad repeat JDM601_2088 aaaf6ed6fc57314299cf295fe2547de6 637 TIGRFAM TIGR03057 xxxLxxG_by_4: X-X-X-Leu-X-X-Gly heptad repeats 193 218 3.0E-4 T 12-10-2018 IPR023908 xxxLxxG heptad repeat JDM601_2088 aaaf6ed6fc57314299cf295fe2547de6 637 TIGRFAM TIGR03057 xxxLxxG_by_4: X-X-X-Leu-X-X-Gly heptad repeats 370 397 3.9E-9 T 12-10-2018 IPR023908 xxxLxxG heptad repeat JDM601_3050 c645a9a2229c00950df9efbeb8c7d39e 713 SMART SM01060 24 413 1.1E-270 T 12-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 JDM601_3050 c645a9a2229c00950df9efbeb8c7d39e 713 ProSitePatterns PS00438 Catalase proximal active site signature. 60 76 - T 12-10-2018 IPR024708 Catalase active site GO:0004096 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 JDM601_3050 c645a9a2229c00950df9efbeb8c7d39e 713 Pfam PF01965 DJ-1/PfpI family 548 663 1.6E-10 T 12-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 JDM601_3050 c645a9a2229c00950df9efbeb8c7d39e 713 ProSitePatterns PS00437 Catalase proximal heme-ligand signature. 355 363 - T 12-10-2018 IPR002226 Catalase haem-binding site GO:0020037 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 JDM601_3050 c645a9a2229c00950df9efbeb8c7d39e 713 SUPERFAMILY SSF52317 545 708 1.12E-22 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like JDM601_3050 c645a9a2229c00950df9efbeb8c7d39e 713 PRINTS PR00067 Catalase signature 122 139 1.0E-70 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 JDM601_3050 c645a9a2229c00950df9efbeb8c7d39e 713 PRINTS PR00067 Catalase signature 141 159 1.0E-70 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 JDM601_3050 c645a9a2229c00950df9efbeb8c7d39e 713 PRINTS PR00067 Catalase signature 342 368 1.0E-70 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 JDM601_3050 c645a9a2229c00950df9efbeb8c7d39e 713 PRINTS PR00067 Catalase signature 37 60 1.0E-70 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 JDM601_3050 c645a9a2229c00950df9efbeb8c7d39e 713 PRINTS PR00067 Catalase signature 310 337 1.0E-70 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 JDM601_3050 c645a9a2229c00950df9efbeb8c7d39e 713 PRINTS PR00067 Catalase signature 101 119 1.0E-70 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 JDM601_3050 c645a9a2229c00950df9efbeb8c7d39e 713 Pfam PF06628 Catalase-related immune-responsive 441 504 2.8E-23 T 12-10-2018 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 JDM601_3050 c645a9a2229c00950df9efbeb8c7d39e 713 Pfam PF00199 Catalase 24 409 4.3E-177 T 12-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 JDM601_3050 c645a9a2229c00950df9efbeb8c7d39e 713 Gene3D G3DSA:2.40.180.10 1 435 6.0E-205 T 12-10-2018 IPR037060 Catalase core domain superfamily GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 JDM601_3050 c645a9a2229c00950df9efbeb8c7d39e 713 SUPERFAMILY SSF56634 5 511 5.76E-218 T 12-10-2018 IPR020835 Catalase superfamily GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 JDM601_3050 c645a9a2229c00950df9efbeb8c7d39e 713 PIRSF PIRSF038927 1 711 0.0 T 12-10-2018 IPR024712 Catalase, mono-functional, haem-containing, clade 2 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 JDM601_3050 c645a9a2229c00950df9efbeb8c7d39e 713 Gene3D G3DSA:1.20.1370.20 438 536 7.9E-33 T 12-10-2018 JDM601_3050 c645a9a2229c00950df9efbeb8c7d39e 713 Gene3D G3DSA:3.40.50.880 539 712 3.5E-44 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like JDM601_1291 c6228eb8d68472f66bed876b82fec14d 548 Gene3D G3DSA:3.30.1360.70 3 111 6.2E-21 T 12-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 JDM601_1291 c6228eb8d68472f66bed876b82fec14d 548 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 132 141 - T 12-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 JDM601_1291 c6228eb8d68472f66bed876b82fec14d 548 SMART SM00836 427 548 4.3E-56 T 12-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 JDM601_1291 c6228eb8d68472f66bed876b82fec14d 548 SMART SM01016 4 93 2.9E-32 T 12-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 JDM601_1291 c6228eb8d68472f66bed876b82fec14d 548 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 15 548 4.4E-122 T 12-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 JDM601_1291 c6228eb8d68472f66bed876b82fec14d 548 Gene3D G3DSA:1.10.730.10 422 548 9.6E-152 T 12-10-2018 JDM601_1291 c6228eb8d68472f66bed876b82fec14d 548 SUPERFAMILY SSF52374 121 436 8.16E-81 T 12-10-2018 JDM601_1291 c6228eb8d68472f66bed876b82fec14d 548 SUPERFAMILY SSF55190 5 113 2.88E-22 T 12-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 JDM601_1291 c6228eb8d68472f66bed876b82fec14d 548 PRINTS PR01038 Arginyl-tRNA synthetase signature 296 317 1.7E-23 T 12-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 JDM601_1291 c6228eb8d68472f66bed876b82fec14d 548 PRINTS PR01038 Arginyl-tRNA synthetase signature 137 153 1.7E-23 T 12-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 JDM601_1291 c6228eb8d68472f66bed876b82fec14d 548 PRINTS PR01038 Arginyl-tRNA synthetase signature 161 174 1.7E-23 T 12-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 JDM601_1291 c6228eb8d68472f66bed876b82fec14d 548 PRINTS PR01038 Arginyl-tRNA synthetase signature 122 137 1.7E-23 T 12-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 JDM601_1291 c6228eb8d68472f66bed876b82fec14d 548 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 24 93 7.9E-20 T 12-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 JDM601_1291 c6228eb8d68472f66bed876b82fec14d 548 Pfam PF05746 DALR anticodon binding domain 427 548 3.4E-40 T 12-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 JDM601_1291 c6228eb8d68472f66bed876b82fec14d 548 Hamap MF_00123 Arginine--tRNA ligase [argS]. 8 548 25.499 T 12-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 JDM601_1291 c6228eb8d68472f66bed876b82fec14d 548 SUPERFAMILY SSF47323 421 548 5.3E-37 T 12-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 JDM601_1291 c6228eb8d68472f66bed876b82fec14d 548 Pfam PF00750 tRNA synthetases class I (R) 240 388 2.9E-10 T 12-10-2018 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KEGG: 00970+6.1.1.19 JDM601_1291 c6228eb8d68472f66bed876b82fec14d 548 Gene3D G3DSA:3.40.50.620 122 421 9.6E-152 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JDM601_1424 768f39c29918bc48519fc7a536aa5fb5 546 Gene3D G3DSA:1.20.1440.100 44 116 3.3E-48 T 12-10-2018 JDM601_1424 768f39c29918bc48519fc7a536aa5fb5 546 Pfam PF12710 haloacid dehalogenase-like hydrolase 33 216 2.7E-31 T 12-10-2018 JDM601_1424 768f39c29918bc48519fc7a536aa5fb5 546 Gene3D G3DSA:3.40.50.1000 33 243 3.3E-48 T 12-10-2018 IPR023214 HAD superfamily JDM601_1424 768f39c29918bc48519fc7a536aa5fb5 546 SMART SM00563 319 433 3.0E-33 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 JDM601_1424 768f39c29918bc48519fc7a536aa5fb5 546 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 33 219 3.5E-20 T 12-10-2018 JDM601_1424 768f39c29918bc48519fc7a536aa5fb5 546 Pfam PF01553 Acyltransferase 305 430 8.3E-28 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 JDM601_1424 768f39c29918bc48519fc7a536aa5fb5 546 SUPERFAMILY SSF69593 299 476 5.62E-34 T 12-10-2018 JDM601_1424 768f39c29918bc48519fc7a536aa5fb5 546 SUPERFAMILY SSF56784 29 220 5.27E-26 T 12-10-2018 IPR036412 HAD-like superfamily JDM601_1424 768f39c29918bc48519fc7a536aa5fb5 546 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 33 231 8.1E-61 T 12-10-2018 IPR006385 HAD-superfamily hydrolase, subfamily IB, SerB1-like JDM601_0781 22e1297ce6167ec5a8791912757865b9 139 Pfam PF10604 Polyketide cyclase / dehydrase and lipid transport 1 131 7.4E-18 T 12-10-2018 IPR019587 Polyketide cyclase/dehydrase JDM601_0781 22e1297ce6167ec5a8791912757865b9 139 SUPERFAMILY SSF55961 1 135 1.03E-28 T 12-10-2018 JDM601_0781 22e1297ce6167ec5a8791912757865b9 139 Gene3D G3DSA:3.30.530.20 1 137 3.0E-30 T 12-10-2018 IPR023393 START-like domain superfamily JDM601_0785 82739f5b52bc274e0bfa7d77282fb9a4 715 Gene3D G3DSA:3.90.226.10 1 324 1.1E-121 T 12-10-2018 JDM601_0785 82739f5b52bc274e0bfa7d77282fb9a4 715 SUPERFAMILY SSF48179 634 714 1.53E-12 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 JDM601_0785 82739f5b52bc274e0bfa7d77282fb9a4 715 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 508 607 1.8E-19 T 12-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 JDM601_0785 82739f5b52bc274e0bfa7d77282fb9a4 715 Pfam PF00378 Enoyl-CoA hydratase/isomerase 13 214 1.1E-36 T 12-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 JDM601_0785 82739f5b52bc274e0bfa7d77282fb9a4 715 Gene3D G3DSA:3.40.50.720 325 508 1.6E-70 T 12-10-2018 JDM601_0785 82739f5b52bc274e0bfa7d77282fb9a4 715 SUPERFAMILY SSF51735 324 506 6.83E-58 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_0785 82739f5b52bc274e0bfa7d77282fb9a4 715 Gene3D G3DSA:1.10.1040.50 509 715 1.9E-66 T 12-10-2018 JDM601_0785 82739f5b52bc274e0bfa7d77282fb9a4 715 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 327 505 1.8E-61 T 12-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 JDM601_0785 82739f5b52bc274e0bfa7d77282fb9a4 715 SUPERFAMILY SSF52096 3 309 9.25E-62 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily JDM601_0785 82739f5b52bc274e0bfa7d77282fb9a4 715 SUPERFAMILY SSF48179 507 647 4.85E-19 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 JDM601_3103 7724ce0037e0cf7ed9da85a009a04398 151 Gene3D G3DSA:2.30.110.10 3 129 3.7E-27 T 12-10-2018 IPR012349 FMN-binding split barrel GO:0048037 JDM601_3103 7724ce0037e0cf7ed9da85a009a04398 151 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 5 89 4.6E-14 T 12-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 JDM601_3103 7724ce0037e0cf7ed9da85a009a04398 151 SUPERFAMILY SSF50475 11 121 3.04E-18 T 12-10-2018 JDM601_2142 88047a927ec5fe01e8a93d5aa38e63aa 271 Gene3D G3DSA:3.40.190.80 147 267 4.2E-25 T 12-10-2018 JDM601_2142 88047a927ec5fe01e8a93d5aa38e63aa 271 PRINTS PR00377 Inositol monophosphatase superfamily signature 182 203 1.2E-23 T 12-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 JDM601_2142 88047a927ec5fe01e8a93d5aa38e63aa 271 PRINTS PR00377 Inositol monophosphatase superfamily signature 42 62 1.2E-23 T 12-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 JDM601_2142 88047a927ec5fe01e8a93d5aa38e63aa 271 PRINTS PR00377 Inositol monophosphatase superfamily signature 213 237 1.2E-23 T 12-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 JDM601_2142 88047a927ec5fe01e8a93d5aa38e63aa 271 PRINTS PR00377 Inositol monophosphatase superfamily signature 83 99 1.2E-23 T 12-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 JDM601_2142 88047a927ec5fe01e8a93d5aa38e63aa 271 Pfam PF00459 Inositol monophosphatase family 14 258 4.0E-47 T 12-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 JDM601_2142 88047a927ec5fe01e8a93d5aa38e63aa 271 SUPERFAMILY SSF56655 13 263 4.97E-60 T 12-10-2018 JDM601_2142 88047a927ec5fe01e8a93d5aa38e63aa 271 Gene3D G3DSA:3.30.540.10 2 141 1.4E-27 T 12-10-2018 JDM601_2142 88047a927ec5fe01e8a93d5aa38e63aa 271 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 216 230 - T 12-10-2018 IPR020550 Inositol monophosphatase, conserved site GO:0046854 JDM601_2672 9ae8f9397e4d5b4a3b399222eb04f46d 251 Gene3D G3DSA:3.40.30.10 56 250 2.1E-52 T 12-10-2018 JDM601_2672 9ae8f9397e4d5b4a3b399222eb04f46d 251 SUPERFAMILY SSF52833 67 230 3.48E-18 T 12-10-2018 IPR036249 Thioredoxin-like superfamily JDM601_2672 9ae8f9397e4d5b4a3b399222eb04f46d 251 Pfam PF13462 Thioredoxin 71 234 4.9E-18 T 12-10-2018 IPR012336 Thioredoxin-like fold JDM601_2630 543d2f9686c8170807fc268ab2271409 77 SUPERFAMILY SSF54814 16 60 2.88E-8 T 12-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 JDM601_2630 543d2f9686c8170807fc268ab2271409 77 Pfam PF13083 KH domain 4 64 1.6E-20 T 12-10-2018 JDM601_2630 543d2f9686c8170807fc268ab2271409 77 Hamap MF_00088 UPF0109 protein . 2 73 20.915 T 12-10-2018 IPR020627 Uncharacterised protein family UPF0109 JDM601_2630 543d2f9686c8170807fc268ab2271409 77 Gene3D G3DSA:3.30.300.20 5 72 3.3E-6 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta JDM601_1612 7679cc8213cb594592506b440bdcdaa5 174 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 46 70 4.9E-8 T 12-10-2018 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 JDM601_1612 7679cc8213cb594592506b440bdcdaa5 174 Gene3D G3DSA:1.20.1290.10 44 162 9.5E-23 T 12-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 JDM601_1612 7679cc8213cb594592506b440bdcdaa5 174 SUPERFAMILY SSF69118 15 158 4.16E-23 T 12-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 JDM601_3873 4c4e83ad150a9c8c2c1ebbba0c52bf45 158 SUPERFAMILY SSF69765 5 156 1.7E-49 T 12-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 JDM601_3873 4c4e83ad150a9c8c2c1ebbba0c52bf45 158 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 39 54 - T 12-10-2018 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 JDM601_3873 4c4e83ad150a9c8c2c1ebbba0c52bf45 158 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 5 157 30.983 T 12-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 JDM601_3873 4c4e83ad150a9c8c2c1ebbba0c52bf45 158 Pfam PF02542 YgbB family 6 155 3.0E-45 T 12-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 JDM601_3873 4c4e83ad150a9c8c2c1ebbba0c52bf45 158 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 6 156 3.1E-49 T 12-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 JDM601_3873 4c4e83ad150a9c8c2c1ebbba0c52bf45 158 Gene3D G3DSA:3.30.1330.50 2 157 2.8E-57 T 12-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 JDM601_2106 4284520c15b7c55e0f59a773f07b2e86 233 Pfam PF01814 Hemerythrin HHE cation binding domain 78 225 3.0E-23 T 12-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 JDM601_2106 4284520c15b7c55e0f59a773f07b2e86 233 Gene3D G3DSA:1.20.120.520 78 229 4.5E-21 T 12-10-2018 JDM601_2106 4284520c15b7c55e0f59a773f07b2e86 233 TIGRFAM TIGR03652 FeS_repair_RIC: iron-sulfur cluster repair di-iron protein 10 225 3.0E-70 T 12-10-2018 IPR019903 Repair of iron centres family JDM601_2106 4284520c15b7c55e0f59a773f07b2e86 233 Gene3D G3DSA:1.10.3910.10 2 63 3.9E-9 T 12-10-2018 IPR038062 ScdA-like, N-terminal domain superfamily JDM601_2106 4284520c15b7c55e0f59a773f07b2e86 233 Pfam PF04405 Domain of Unknown function (DUF542) 7 59 7.7E-21 T 12-10-2018 IPR019903 Repair of iron centres family JDM601_3511 05a78bc4ddd016df82a567ca0ae95537 485 Pfam PF00171 Aldehyde dehydrogenase family 17 481 4.8E-160 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 JDM601_3511 05a78bc4ddd016df82a567ca0ae95537 485 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 256 263 - T 12-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 JDM601_3511 05a78bc4ddd016df82a567ca0ae95537 485 Gene3D G3DSA:3.40.309.10 263 453 2.0E-169 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 JDM601_3511 05a78bc4ddd016df82a567ca0ae95537 485 SUPERFAMILY SSF53720 14 484 3.14E-153 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 JDM601_3511 05a78bc4ddd016df82a567ca0ae95537 485 Gene3D G3DSA:3.40.605.10 17 481 2.0E-169 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 JDM601_3511 05a78bc4ddd016df82a567ca0ae95537 485 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 284 295 - T 12-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 JDM601_1237 7d11ad195d07a671787294a67c2df8ec 580 SUPERFAMILY SSF90123 7 316 7.72E-67 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JDM601_1237 7d11ad195d07a671787294a67c2df8ec 580 SUPERFAMILY SSF52540 325 573 3.13E-80 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_1237 7d11ad195d07a671787294a67c2df8ec 580 SMART SM00382 360 549 1.7E-16 T 12-10-2018 IPR003593 AAA+ ATPase domain JDM601_1237 7d11ad195d07a671787294a67c2df8ec 580 Gene3D G3DSA:3.40.50.300 325 576 5.6E-77 T 12-10-2018 JDM601_1237 7d11ad195d07a671787294a67c2df8ec 580 Pfam PF00664 ABC transporter transmembrane region 19 288 1.4E-42 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 JDM601_1237 7d11ad195d07a671787294a67c2df8ec 580 Gene3D G3DSA:1.20.1560.10 2 317 6.6E-78 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JDM601_1237 7d11ad195d07a671787294a67c2df8ec 580 Pfam PF00005 ABC transporter 351 502 5.4E-28 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JDM601_1237 7d11ad195d07a671787294a67c2df8ec 580 ProSitePatterns PS00211 ABC transporters family signature. 475 489 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JDM601_3461 c01863553bb41ee2982e6ddf3ec685b5 540 SUPERFAMILY SSF51905 5 535 6.77E-37 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_3461 c01863553bb41ee2982e6ddf3ec685b5 540 Pfam PF00890 FAD binding domain 11 518 2.5E-72 T 12-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 JDM601_3461 c01863553bb41ee2982e6ddf3ec685b5 540 SUPERFAMILY SSF56425 295 471 1.53E-27 T 12-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 JDM601_3461 c01863553bb41ee2982e6ddf3ec685b5 540 Gene3D G3DSA:3.90.700.10 322 467 7.6E-161 T 12-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 JDM601_3461 c01863553bb41ee2982e6ddf3ec685b5 540 Gene3D G3DSA:3.50.50.60 9 530 7.6E-161 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_0881 d101de8e3be7031a41b9e5412f92da3e 758 Gene3D G3DSA:3.30.470.30 484 593 2.1E-58 T 12-10-2018 JDM601_0881 d101de8e3be7031a41b9e5412f92da3e 758 Pfam PF13298 DNA polymerase Ligase (LigD) 332 435 1.5E-36 T 12-10-2018 IPR014144 DNA ligase D, 3'-phosphoesterase domain JDM601_0881 d101de8e3be7031a41b9e5412f92da3e 758 TIGRFAM TIGR02777 LigD_PE_dom: DNA ligase D, 3'-phosphoesterase domain 301 450 2.9E-57 T 12-10-2018 IPR014144 DNA ligase D, 3'-phosphoesterase domain JDM601_0881 d101de8e3be7031a41b9e5412f92da3e 758 TIGRFAM TIGR02779 NHEJ_ligase_lig: DNA ligase D, ligase domain 460 755 9.8E-89 T 12-10-2018 IPR014146 DNA ligase D, ligase domain JDM601_0881 d101de8e3be7031a41b9e5412f92da3e 758 Pfam PF04679 ATP dependent DNA ligase C terminal region 656 749 1.9E-22 T 12-10-2018 IPR012309 DNA ligase, ATP-dependent, C-terminal GO:0003910|GO:0006281|GO:0006310 JDM601_0881 d101de8e3be7031a41b9e5412f92da3e 758 SUPERFAMILY SSF50249 640 757 3.26E-26 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold JDM601_0881 d101de8e3be7031a41b9e5412f92da3e 758 Gene3D G3DSA:2.40.50.140 639 757 7.3E-39 T 12-10-2018 JDM601_0881 d101de8e3be7031a41b9e5412f92da3e 758 TIGRFAM TIGR02778 ligD_pol: DNA ligase D, polymerase domain 10 264 1.8E-89 T 12-10-2018 IPR014145 DNA ligase D, polymerase domain JDM601_0881 d101de8e3be7031a41b9e5412f92da3e 758 SUPERFAMILY SSF56091 457 638 8.15E-39 T 12-10-2018 JDM601_0881 d101de8e3be7031a41b9e5412f92da3e 758 Pfam PF01068 ATP dependent DNA ligase domain 469 637 7.2E-27 T 12-10-2018 IPR012310 DNA ligase, ATP-dependent, central GO:0003910|GO:0005524|GO:0006281|GO:0006310 JDM601_0881 d101de8e3be7031a41b9e5412f92da3e 758 Gene3D G3DSA:3.30.1490.70 465 635 2.1E-58 T 12-10-2018 JDM601_0881 d101de8e3be7031a41b9e5412f92da3e 758 Gene3D G3DSA:3.90.920.30 17 301 5.2E-98 T 12-10-2018 JDM601_2999 c074050314963caacb1ee401ca82cbe8 189 ProSitePatterns PS01081 TetR-type HTH domain signature. 33 64 - T 12-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site JDM601_2999 c074050314963caacb1ee401ca82cbe8 189 SUPERFAMILY SSF46689 7 77 2.99E-15 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JDM601_2999 c074050314963caacb1ee401ca82cbe8 189 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 21 34 2.9E-6 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_2999 c074050314963caacb1ee401ca82cbe8 189 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 42 65 2.9E-6 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_2999 c074050314963caacb1ee401ca82cbe8 189 Pfam PF00440 Bacterial regulatory proteins, tetR family 23 67 1.4E-12 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_2999 c074050314963caacb1ee401ca82cbe8 189 Gene3D G3DSA:1.10.357.10 3 189 3.3E-26 T 12-10-2018 JDM601_0277 1b47e5bb81d43b1d0988fb1e6fffa8ab 884 Gene3D G3DSA:3.40.228.10 570 665 3.7E-23 T 12-10-2018 JDM601_0277 1b47e5bb81d43b1d0988fb1e6fffa8ab 884 Pfam PF01568 Molydopterin dinucleotide binding domain 721 839 1.5E-12 T 12-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 JDM601_0277 1b47e5bb81d43b1d0988fb1e6fffa8ab 884 SUPERFAMILY SSF53706 1 676 5.76E-186 T 12-10-2018 JDM601_0277 1b47e5bb81d43b1d0988fb1e6fffa8ab 884 SUPERFAMILY SSF50692 656 847 3.62E-36 T 12-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily JDM601_0277 1b47e5bb81d43b1d0988fb1e6fffa8ab 884 Gene3D G3DSA:2.40.40.20 666 847 1.1E-59 T 12-10-2018 JDM601_0277 1b47e5bb81d43b1d0988fb1e6fffa8ab 884 Pfam PF00384 Molybdopterin oxidoreductase 2 282 8.8E-17 T 12-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 JDM601_0277 1b47e5bb81d43b1d0988fb1e6fffa8ab 884 Gene3D G3DSA:3.40.50.740 332 502 2.7E-53 T 12-10-2018 JDM601_0471 04d246a2483d7abb997453b2461ecb5a 352 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 218 348 6.1E-35 T 12-10-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 JDM601_0471 04d246a2483d7abb997453b2461ecb5a 352 Gene3D G3DSA:3.90.78.10 236 351 3.0E-36 T 12-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 JDM601_0471 04d246a2483d7abb997453b2461ecb5a 352 Gene3D G3DSA:3.30.465.10 83 229 1.4E-40 T 12-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 JDM601_0471 04d246a2483d7abb997453b2461ecb5a 352 Pfam PF01565 FAD binding domain 30 158 2.8E-20 T 12-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 JDM601_0471 04d246a2483d7abb997453b2461ecb5a 352 SUPERFAMILY SSF56194 215 350 5.23E-33 T 12-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 JDM601_0471 04d246a2483d7abb997453b2461ecb5a 352 Gene3D G3DSA:3.30.43.10 3 81 4.5E-12 T 12-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 JDM601_0471 04d246a2483d7abb997453b2461ecb5a 352 SUPERFAMILY SSF56176 16 191 2.2E-35 T 12-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 JDM601_0471 04d246a2483d7abb997453b2461ecb5a 352 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 352 74.651 T 12-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 JDM601_3863 ea25dcc1975dbd034b3cef53bb977e71 737 SMART SM00642 260 600 7.0E-8 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 JDM601_3863 ea25dcc1975dbd034b3cef53bb977e71 737 SUPERFAMILY SSF51011 633 735 2.64E-32 T 12-10-2018 JDM601_3863 ea25dcc1975dbd034b3cef53bb977e71 737 Gene3D G3DSA:2.60.40.10 11 232 3.7E-70 T 12-10-2018 IPR013783 Immunoglobulin-like fold JDM601_3863 ea25dcc1975dbd034b3cef53bb977e71 737 TIGRFAM TIGR01515 branching_enzym: 1,4-alpha-glucan branching enzyme 115 733 1.8E-262 T 12-10-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 JDM601_3863 ea25dcc1975dbd034b3cef53bb977e71 737 SUPERFAMILY SSF81296 23 120 2.0E-18 T 12-10-2018 IPR014756 Immunoglobulin E-set JDM601_3863 ea25dcc1975dbd034b3cef53bb977e71 737 Gene3D G3DSA:3.20.20.80 233 632 3.2E-179 T 12-10-2018 JDM601_3863 ea25dcc1975dbd034b3cef53bb977e71 737 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 638 734 7.2E-21 T 12-10-2018 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 JDM601_3863 ea25dcc1975dbd034b3cef53bb977e71 737 PIRSF PIRSF000463 15 737 4.6E-272 T 12-10-2018 IPR037439 1,4-alpha-glucan-branching enzyme GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900|Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 JDM601_3863 ea25dcc1975dbd034b3cef53bb977e71 737 Gene3D G3DSA:2.60.40.1180 633 736 7.5E-39 T 12-10-2018 IPR013780 Glycosyl hydrolase, all-beta JDM601_3863 ea25dcc1975dbd034b3cef53bb977e71 737 SUPERFAMILY SSF81296 148 206 1.54E-5 T 12-10-2018 IPR014756 Immunoglobulin E-set JDM601_3863 ea25dcc1975dbd034b3cef53bb977e71 737 Hamap MF_00685 1,4-alpha-glucan branching enzyme GlgB [glgB]. 107 736 42.69 T 12-10-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 JDM601_3863 ea25dcc1975dbd034b3cef53bb977e71 737 Pfam PF00128 Alpha amylase, catalytic domain 281 349 8.5E-8 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 JDM601_3863 ea25dcc1975dbd034b3cef53bb977e71 737 SUPERFAMILY SSF51445 190 626 2.06E-112 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily JDM601_3863 ea25dcc1975dbd034b3cef53bb977e71 737 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 131 217 1.7E-16 T 12-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 JDM601_1802 3271d8873394b61b644d748013717880 912 Gene3D G3DSA:1.10.150.20 692 835 6.8E-101 T 12-10-2018 JDM601_1802 3271d8873394b61b644d748013717880 912 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 190 283 6.0E-26 T 12-10-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 JDM601_1802 3271d8873394b61b644d748013717880 912 SUPERFAMILY SSF47807 189 302 7.33E-31 T 12-10-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily JDM601_1802 3271d8873394b61b644d748013717880 912 SUPERFAMILY SSF53098 325 497 5.46E-32 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily JDM601_1802 3271d8873394b61b644d748013717880 912 Gene3D G3DSA:3.30.70.370 642 907 6.8E-101 T 12-10-2018 JDM601_1802 3271d8873394b61b644d748013717880 912 TIGRFAM TIGR00593 pola: DNA polymerase I 21 910 0.0 T 12-10-2018 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 JDM601_1802 3271d8873394b61b644d748013717880 912 Gene3D G3DSA:3.40.50.1010 21 295 7.6E-95 T 12-10-2018 JDM601_1802 3271d8873394b61b644d748013717880 912 Gene3D G3DSA:3.30.420.10 328 520 7.8E-38 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 JDM601_1802 3271d8873394b61b644d748013717880 912 SUPERFAMILY SSF88723 16 188 1.05E-54 T 12-10-2018 IPR029060 PIN-like domain superfamily JDM601_1802 3271d8873394b61b644d748013717880 912 Gene3D G3DSA:1.10.150.20 192 264 7.6E-95 T 12-10-2018 JDM601_1802 3271d8873394b61b644d748013717880 912 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 21 188 2.4E-54 T 12-10-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 JDM601_1802 3271d8873394b61b644d748013717880 912 SMART SM00475 17 279 1.2E-139 T 12-10-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 JDM601_1802 3271d8873394b61b644d748013717880 912 PRINTS PR00868 DNA-polymerase family A (pol I) signature 737 762 3.7E-65 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 JDM601_1802 3271d8873394b61b644d748013717880 912 PRINTS PR00868 DNA-polymerase family A (pol I) signature 683 706 3.7E-65 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 JDM601_1802 3271d8873394b61b644d748013717880 912 PRINTS PR00868 DNA-polymerase family A (pol I) signature 828 844 3.7E-65 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 JDM601_1802 3271d8873394b61b644d748013717880 912 PRINTS PR00868 DNA-polymerase family A (pol I) signature 858 871 3.7E-65 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 JDM601_1802 3271d8873394b61b644d748013717880 912 PRINTS PR00868 DNA-polymerase family A (pol I) signature 633 655 3.7E-65 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 JDM601_1802 3271d8873394b61b644d748013717880 912 PRINTS PR00868 DNA-polymerase family A (pol I) signature 774 785 3.7E-65 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 JDM601_1802 3271d8873394b61b644d748013717880 912 PRINTS PR00868 DNA-polymerase family A (pol I) signature 713 726 3.7E-65 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 JDM601_1802 3271d8873394b61b644d748013717880 912 PRINTS PR00868 DNA-polymerase family A (pol I) signature 796 807 3.7E-65 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 JDM601_1802 3271d8873394b61b644d748013717880 912 Gene3D G3DSA:1.20.1060.10 522 636 2.4E-31 T 12-10-2018 JDM601_1802 3271d8873394b61b644d748013717880 912 ProSitePatterns PS00447 DNA polymerase family A signature. 737 756 - T 12-10-2018 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 JDM601_1802 3271d8873394b61b644d748013717880 912 SUPERFAMILY SSF56672 504 909 1.45E-139 T 12-10-2018 JDM601_1802 3271d8873394b61b644d748013717880 912 SMART SM00474 320 497 2.3E-25 T 12-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 JDM601_1802 3271d8873394b61b644d748013717880 912 SMART SM00279 191 226 1.8E-14 T 12-10-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 JDM601_1802 3271d8873394b61b644d748013717880 912 Pfam PF00476 DNA polymerase family A 530 908 1.2E-142 T 12-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 JDM601_1802 3271d8873394b61b644d748013717880 912 SMART SM00482 664 875 2.5E-111 T 12-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 JDM601_3447 9ac8a84d396e172bd114a7630593bd25 297 Pfam PF00296 Luciferase-like monooxygenase 16 225 1.0E-45 T 12-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 JDM601_3447 9ac8a84d396e172bd114a7630593bd25 297 Gene3D G3DSA:3.20.20.30 2 297 4.9E-68 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 JDM601_3447 9ac8a84d396e172bd114a7630593bd25 297 TIGRFAM TIGR03619 F420_Rv2161c: probable F420-dependent oxidoreductase, Rv2161c family 22 268 1.3E-62 T 12-10-2018 IPR019921 Luciferase-like, F420-dependent oxidoreductase, Rv2161c, predicted JDM601_3447 9ac8a84d396e172bd114a7630593bd25 297 SUPERFAMILY SSF51679 9 296 1.57E-60 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 JDM601_2866 ba8ace4bdc0d1cf9ff6444827f40701c 408 Hamap MF_01350 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic [ndhA]. 4 337 24.793 T 12-10-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 JDM601_2866 ba8ace4bdc0d1cf9ff6444827f40701c 408 ProSitePatterns PS00668 Respiratory-chain NADH dehydrogenase subunit 1 signature 2. 214 227 - T 12-10-2018 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 JDM601_2866 ba8ace4bdc0d1cf9ff6444827f40701c 408 Pfam PF00146 NADH dehydrogenase 11 330 9.0E-126 T 12-10-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 JDM601_1557 26080b2172db458c5377f2888f5e68ef 298 SUPERFAMILY SSF54814 182 298 1.01E-36 T 12-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 JDM601_1557 26080b2172db458c5377f2888f5e68ef 298 Pfam PF07650 KH domain 208 287 1.0E-19 T 12-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JDM601_1557 26080b2172db458c5377f2888f5e68ef 298 TIGRFAM TIGR00436 era: GTP-binding protein Era 7 281 1.0E-68 T 12-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JDM601_1557 26080b2172db458c5377f2888f5e68ef 298 Gene3D G3DSA:3.40.50.300 2 183 4.8E-44 T 12-10-2018 JDM601_1557 26080b2172db458c5377f2888f5e68ef 298 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 9 29 1.2E-5 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 JDM601_1557 26080b2172db458c5377f2888f5e68ef 298 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 85 100 1.2E-5 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 JDM601_1557 26080b2172db458c5377f2888f5e68ef 298 Pfam PF01926 50S ribosome-binding GTPase 9 125 1.0E-20 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 JDM601_1557 26080b2172db458c5377f2888f5e68ef 298 Gene3D G3DSA:3.30.300.20 185 298 3.5E-41 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta JDM601_1557 26080b2172db458c5377f2888f5e68ef 298 Hamap MF_00367 GTPase Era [era]. 4 298 34.721 T 12-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JDM601_1557 26080b2172db458c5377f2888f5e68ef 298 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 8 166 1.4E-18 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 JDM601_1557 26080b2172db458c5377f2888f5e68ef 298 SUPERFAMILY SSF52540 9 212 3.24E-38 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_3126 619abb9439665cc0daa81db56cdf2d14 493 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 319 341 4.7E-33 T 12-10-2018 JDM601_3126 619abb9439665cc0daa81db56cdf2d14 493 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 4.7E-33 T 12-10-2018 JDM601_3126 619abb9439665cc0daa81db56cdf2d14 493 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 167 185 4.7E-33 T 12-10-2018 JDM601_3126 619abb9439665cc0daa81db56cdf2d14 493 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 290 306 4.7E-33 T 12-10-2018 JDM601_3126 619abb9439665cc0daa81db56cdf2d14 493 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 206 224 4.7E-33 T 12-10-2018 JDM601_3126 619abb9439665cc0daa81db56cdf2d14 493 Gene3D G3DSA:3.30.390.30 367 488 2.5E-36 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 JDM601_3126 619abb9439665cc0daa81db56cdf2d14 493 SUPERFAMILY SSF51905 4 363 9.07E-50 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_3126 619abb9439665cc0daa81db56cdf2d14 493 PIRSF PIRSF000350 2 130 2.5E-13 T 12-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 JDM601_3126 619abb9439665cc0daa81db56cdf2d14 493 PIRSF PIRSF000350 135 488 2.4E-64 T 12-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 JDM601_3126 619abb9439665cc0daa81db56cdf2d14 493 SUPERFAMILY SSF55424 372 486 1.31E-25 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 JDM601_3126 619abb9439665cc0daa81db56cdf2d14 493 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 354 1.6E-57 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JDM601_3126 619abb9439665cc0daa81db56cdf2d14 493 Gene3D G3DSA:3.50.50.60 8 357 1.6E-104 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_3126 619abb9439665cc0daa81db56cdf2d14 493 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 170 179 1.5E-43 T 12-10-2018 JDM601_3126 619abb9439665cc0daa81db56cdf2d14 493 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 435 450 1.5E-43 T 12-10-2018 JDM601_3126 619abb9439665cc0daa81db56cdf2d14 493 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 1.5E-43 T 12-10-2018 JDM601_3126 619abb9439665cc0daa81db56cdf2d14 493 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 334 341 1.5E-43 T 12-10-2018 JDM601_3126 619abb9439665cc0daa81db56cdf2d14 493 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 206 231 1.5E-43 T 12-10-2018 JDM601_3126 619abb9439665cc0daa81db56cdf2d14 493 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 291 305 1.5E-43 T 12-10-2018 JDM601_3126 619abb9439665cc0daa81db56cdf2d14 493 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 370 391 1.5E-43 T 12-10-2018 JDM601_3126 619abb9439665cc0daa81db56cdf2d14 493 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 457 477 1.5E-43 T 12-10-2018 JDM601_3126 619abb9439665cc0daa81db56cdf2d14 493 Gene3D G3DSA:3.50.50.60 181 299 1.6E-104 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_3126 619abb9439665cc0daa81db56cdf2d14 493 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 374 482 1.7E-23 T 12-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 JDM601_3766 a84e3d913f3e3d58f056e3793b9eb548 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 4.6E-21 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3766 a84e3d913f3e3d58f056e3793b9eb548 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 4.6E-21 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3766 a84e3d913f3e3d58f056e3793b9eb548 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 13 30 4.6E-21 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3766 a84e3d913f3e3d58f056e3793b9eb548 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 133 149 4.6E-21 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3766 a84e3d913f3e3d58f056e3793b9eb548 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 218 238 4.6E-21 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3766 a84e3d913f3e3d58f056e3793b9eb548 258 Gene3D G3DSA:3.40.50.720 12 257 5.5E-51 T 12-10-2018 JDM601_3766 a84e3d913f3e3d58f056e3793b9eb548 258 SUPERFAMILY SSF51735 14 256 5.55E-54 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_3766 a84e3d913f3e3d58f056e3793b9eb548 258 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 20 255 9.8E-48 T 12-10-2018 JDM601_3158 c06b90e91a299d7f01fadc6fa5b3b2e0 304 Pfam PF03631 Virulence factor BrkB 38 293 3.2E-42 T 12-10-2018 IPR017039 Virulence factor BrkB JDM601_3158 c06b90e91a299d7f01fadc6fa5b3b2e0 304 PIRSF PIRSF035875 15 303 4.6E-25 T 12-10-2018 IPR017039 Virulence factor BrkB JDM601_3158 c06b90e91a299d7f01fadc6fa5b3b2e0 304 TIGRFAM TIGR00766 TIGR00766: inner membrane protein YhjD 24 290 1.1E-82 T 12-10-2018 IPR005274 Inner membrane protein YhjD JDM601_2573 f524d3a6d2ec4d2abe66ade335ba5664 462 Gene3D G3DSA:3.50.50.60 4 330 2.1E-82 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_2573 f524d3a6d2ec4d2abe66ade335ba5664 462 Gene3D G3DSA:3.30.390.30 347 462 4.7E-35 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 JDM601_2573 f524d3a6d2ec4d2abe66ade335ba5664 462 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 36 46 - T 12-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 JDM601_2573 f524d3a6d2ec4d2abe66ade335ba5664 462 SUPERFAMILY SSF51905 1 378 6.4E-36 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_2573 f524d3a6d2ec4d2abe66ade335ba5664 462 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 4 322 2.4E-42 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JDM601_2573 f524d3a6d2ec4d2abe66ade335ba5664 462 Gene3D G3DSA:3.50.50.60 155 277 2.1E-82 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_2573 f524d3a6d2ec4d2abe66ade335ba5664 462 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 348 457 8.7E-29 T 12-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 JDM601_2573 f524d3a6d2ec4d2abe66ade335ba5664 462 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 174 199 4.0E-39 T 12-10-2018 JDM601_2573 f524d3a6d2ec4d2abe66ade335ba5664 462 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 303 310 4.0E-39 T 12-10-2018 JDM601_2573 f524d3a6d2ec4d2abe66ade335ba5664 462 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 344 365 4.0E-39 T 12-10-2018 JDM601_2573 f524d3a6d2ec4d2abe66ade335ba5664 462 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 4.0E-39 T 12-10-2018 JDM601_2573 f524d3a6d2ec4d2abe66ade335ba5664 462 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 138 147 4.0E-39 T 12-10-2018 JDM601_2573 f524d3a6d2ec4d2abe66ade335ba5664 462 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 261 275 4.0E-39 T 12-10-2018 JDM601_2573 f524d3a6d2ec4d2abe66ade335ba5664 462 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 409 424 4.0E-39 T 12-10-2018 JDM601_2573 f524d3a6d2ec4d2abe66ade335ba5664 462 PIRSF PIRSF000350 1 446 1.3E-75 T 12-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 JDM601_2573 f524d3a6d2ec4d2abe66ade335ba5664 462 SUPERFAMILY SSF55424 345 459 3.26E-33 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 JDM601_2573 f524d3a6d2ec4d2abe66ade335ba5664 462 TIGRFAM TIGR03452 mycothione_red: mycothione reductase 3 461 4.1E-236 T 12-10-2018 IPR017817 Mycothione reductase MetaCyc: PWY-6421 JDM601_2573 f524d3a6d2ec4d2abe66ade335ba5664 462 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 3.5E-24 T 12-10-2018 JDM601_2573 f524d3a6d2ec4d2abe66ade335ba5664 462 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 260 276 3.5E-24 T 12-10-2018 JDM601_2573 f524d3a6d2ec4d2abe66ade335ba5664 462 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 288 310 3.5E-24 T 12-10-2018 JDM601_2573 f524d3a6d2ec4d2abe66ade335ba5664 462 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 135 153 3.5E-24 T 12-10-2018 JDM601_2573 f524d3a6d2ec4d2abe66ade335ba5664 462 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 174 192 3.5E-24 T 12-10-2018 JDM601_3717 4f7641f2eac00d5175a72380017b2196 515 Pfam PF00501 AMP-binding enzyme 13 418 1.2E-94 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 JDM601_3717 4f7641f2eac00d5175a72380017b2196 515 ProSitePatterns PS00455 Putative AMP-binding domain signature. 175 186 - T 12-10-2018 IPR020845 AMP-binding, conserved site JDM601_3717 4f7641f2eac00d5175a72380017b2196 515 Pfam PF13193 AMP-binding enzyme C-terminal domain 428 505 2.5E-17 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain JDM601_3717 4f7641f2eac00d5175a72380017b2196 515 SUPERFAMILY SSF56801 5 514 4.97E-142 T 12-10-2018 JDM601_3717 4f7641f2eac00d5175a72380017b2196 515 Gene3D G3DSA:3.40.50.12780 2 412 2.7E-109 T 12-10-2018 JDM601_3717 4f7641f2eac00d5175a72380017b2196 515 Gene3D G3DSA:3.30.300.310 415 515 2.7E-29 T 12-10-2018 JDM601_1719 6bb8e640456e52079c478211d378c653 404 Gene3D G3DSA:3.40.50.300 1 301 2.6E-57 T 12-10-2018 JDM601_1719 6bb8e640456e52079c478211d378c653 404 SUPERFAMILY SSF52540 1 285 2.48E-25 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_1719 6bb8e640456e52079c478211d378c653 404 Pfam PF02374 Anion-transporting ATPase 1 296 1.0E-33 T 12-10-2018 IPR025723 Anion-transporting ATPase-like domain Reactome: R-HSA-381038 JDM601_1719 6bb8e640456e52079c478211d378c653 404 Gene3D G3DSA:2.60.40.790 323 392 1.6E-16 T 12-10-2018 IPR008978 HSP20-like chaperone JDM601_4252 ea1a646dee7575c1e8055a4b250cc133 293 SMART SM00346 21 108 4.4E-16 T 12-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 JDM601_4252 ea1a646dee7575c1e8055a4b250cc133 293 SUPERFAMILY SSF55781 76 255 1.57E-39 T 12-10-2018 JDM601_4252 ea1a646dee7575c1e8055a4b250cc133 293 Gene3D G3DSA:1.10.10.10 8 86 7.6E-18 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JDM601_4252 ea1a646dee7575c1e8055a4b250cc133 293 Gene3D G3DSA:3.30.450.40 89 259 1.1E-46 T 12-10-2018 IPR029016 GAF-like domain superfamily JDM601_4252 ea1a646dee7575c1e8055a4b250cc133 293 Pfam PF09339 IclR helix-turn-helix domain 24 72 9.8E-14 T 12-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 JDM601_4252 ea1a646dee7575c1e8055a4b250cc133 293 SUPERFAMILY SSF46785 24 91 2.37E-12 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JDM601_4252 ea1a646dee7575c1e8055a4b250cc133 293 Pfam PF01614 Bacterial transcriptional regulator 138 251 8.1E-23 T 12-10-2018 IPR014757 Transcription regulator IclR, C-terminal JDM601_3045 a1de568a48f5f07d4970ad25c794ea45 599 SMART SM00878 342 452 2.2E-53 T 12-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 JDM601_3045 a1de568a48f5f07d4970ad25c794ea45 599 SUPERFAMILY SSF52440 7 120 2.23E-45 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily JDM601_3045 a1de568a48f5f07d4970ad25c794ea45 599 Pfam PF00289 Biotin carboxylase, N-terminal domain 9 117 6.8E-43 T 12-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 JDM601_3045 a1de568a48f5f07d4970ad25c794ea45 599 SUPERFAMILY SSF51230 527 598 1.96E-20 T 12-10-2018 IPR011053 Single hybrid motif JDM601_3045 a1de568a48f5f07d4970ad25c794ea45 599 SUPERFAMILY SSF51246 336 456 7.85E-36 T 12-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 JDM601_3045 a1de568a48f5f07d4970ad25c794ea45 599 Pfam PF00364 Biotin-requiring enzyme 533 598 1.1E-17 T 12-10-2018 IPR000089 Biotin/lipoyl attachment JDM601_3045 a1de568a48f5f07d4970ad25c794ea45 599 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 293 300 - T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 JDM601_3045 a1de568a48f5f07d4970ad25c794ea45 599 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 160 174 - T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 JDM601_3045 a1de568a48f5f07d4970ad25c794ea45 599 Gene3D G3DSA:2.40.50.100 527 599 6.0E-22 T 12-10-2018 JDM601_3045 a1de568a48f5f07d4970ad25c794ea45 599 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 555 572 - T 12-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 JDM601_3045 a1de568a48f5f07d4970ad25c794ea45 599 Pfam PF02785 Biotin carboxylase C-terminal domain 342 452 4.7E-34 T 12-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 JDM601_3045 a1de568a48f5f07d4970ad25c794ea45 599 Gene3D G3DSA:3.30.470.130 1 458 4.1E-178 T 12-10-2018 JDM601_3045 a1de568a48f5f07d4970ad25c794ea45 599 SUPERFAMILY SSF56059 122 331 7.07E-60 T 12-10-2018 JDM601_3045 a1de568a48f5f07d4970ad25c794ea45 599 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 122 330 1.1E-80 T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 JDM601_1425 04e316cfea64f5a682e0357fd14dcec4 787 PIRSF PIRSF500064 73 782 1.1E-170 T 12-10-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109|Reactome: R-HSA-8931987|Reactome: R-HSA-9018519 JDM601_1425 04e316cfea64f5a682e0357fd14dcec4 787 SMART SM00563 265 392 1.0E-11 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 JDM601_1425 04e316cfea64f5a682e0357fd14dcec4 787 SUPERFAMILY SSF69593 262 446 1.83E-10 T 12-10-2018 JDM601_1425 04e316cfea64f5a682e0357fd14dcec4 787 Pfam PF01553 Acyltransferase 258 374 1.3E-14 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 JDM601_1425 04e316cfea64f5a682e0357fd14dcec4 787 PIRSF PIRSF000437 37 781 1.3E-166 T 12-10-2018 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase GO:0008374|GO:0044255 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166 JDM601_2966 cb49134083e471df2f8faef09359355d 381 Gene3D G3DSA:3.10.20.30 295 381 4.0E-15 T 12-10-2018 IPR012675 Beta-grasp domain superfamily JDM601_2966 cb49134083e471df2f8faef09359355d 381 Gene3D G3DSA:2.40.30.10 55 157 1.2E-19 T 12-10-2018 JDM601_2966 cb49134083e471df2f8faef09359355d 381 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 90 100 3.7E-6 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 JDM601_2966 cb49134083e471df2f8faef09359355d 381 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 109 116 3.7E-6 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 JDM601_2966 cb49134083e471df2f8faef09359355d 381 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 170 189 3.7E-6 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 JDM601_2966 cb49134083e471df2f8faef09359355d 381 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 207 218 3.7E-6 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 JDM601_2966 cb49134083e471df2f8faef09359355d 381 SUPERFAMILY SSF63380 37 163 2.17E-22 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel JDM601_2966 cb49134083e471df2f8faef09359355d 381 SUPERFAMILY SSF54292 281 381 6.69E-22 T 12-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 JDM601_2966 cb49134083e471df2f8faef09359355d 381 SUPERFAMILY SSF52343 150 281 1.17E-25 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain JDM601_2966 cb49134083e471df2f8faef09359355d 381 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 308 371 7.9E-10 T 12-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 JDM601_2966 cb49134083e471df2f8faef09359355d 381 PRINTS PR00410 Phenol hydroxylase reductase family signature 154 163 7.3E-11 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 JDM601_2966 cb49134083e471df2f8faef09359355d 381 PRINTS PR00410 Phenol hydroxylase reductase family signature 90 102 7.3E-11 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 JDM601_2966 cb49134083e471df2f8faef09359355d 381 PRINTS PR00410 Phenol hydroxylase reductase family signature 257 265 7.3E-11 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 JDM601_2966 cb49134083e471df2f8faef09359355d 381 PRINTS PR00410 Phenol hydroxylase reductase family signature 170 189 7.3E-11 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 JDM601_2966 cb49134083e471df2f8faef09359355d 381 Pfam PF00970 Oxidoreductase FAD-binding domain 87 159 1.5E-10 T 12-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 JDM601_2966 cb49134083e471df2f8faef09359355d 381 Pfam PF00175 Oxidoreductase NAD-binding domain 171 266 1.7E-8 T 12-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 JDM601_2966 cb49134083e471df2f8faef09359355d 381 Gene3D G3DSA:3.40.50.80 164 294 4.3E-24 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain JDM601_1551 705da3faf50f9ce6b1702f9be9b19664 245 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 15 240 5.7E-32 T 12-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 JDM601_1551 705da3faf50f9ce6b1702f9be9b19664 245 SUPERFAMILY SSF88697 4 69 1.59E-10 T 12-10-2018 IPR015947 PUA-like superfamily JDM601_1551 705da3faf50f9ce6b1702f9be9b19664 245 Gene3D G3DSA:3.40.1280.10 73 245 2.1E-56 T 12-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal JDM601_1551 705da3faf50f9ce6b1702f9be9b19664 245 Gene3D G3DSA:2.40.240.20 2 71 2.7E-19 T 12-10-2018 JDM601_1551 705da3faf50f9ce6b1702f9be9b19664 245 SUPERFAMILY SSF75217 74 244 7.85E-41 T 12-10-2018 IPR029028 Alpha/beta knot methyltransferases JDM601_1551 705da3faf50f9ce6b1702f9be9b19664 245 PIRSF PIRSF015601 2 244 2.6E-41 T 12-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 JDM601_1551 705da3faf50f9ce6b1702f9be9b19664 245 Pfam PF04452 RNA methyltransferase 19 237 1.7E-56 T 12-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 JDM601_0078 f2f9c0e2225d117612c51e416cfa53ce 202 SUPERFAMILY SSF46689 13 92 1.64E-13 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JDM601_0078 f2f9c0e2225d117612c51e416cfa53ce 202 Pfam PF00440 Bacterial regulatory proteins, tetR family 22 67 2.2E-13 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_0078 f2f9c0e2225d117612c51e416cfa53ce 202 Gene3D G3DSA:1.10.357.10 63 193 2.4E-10 T 12-10-2018 JDM601_0078 f2f9c0e2225d117612c51e416cfa53ce 202 Gene3D G3DSA:1.10.10.60 11 62 1.9E-11 T 12-10-2018 JDM601_2378 3136adf5a4bce7adb76837eb41dbd167 358 SUPERFAMILY SSF46785 263 337 6.35E-22 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JDM601_2378 3136adf5a4bce7adb76837eb41dbd167 358 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 260 334 2.0E-25 T 12-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 JDM601_2378 3136adf5a4bce7adb76837eb41dbd167 358 Gene3D G3DSA:1.10.10.10 264 342 2.8E-31 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JDM601_2378 3136adf5a4bce7adb76837eb41dbd167 358 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 12 242 3.3E-106 T 12-10-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 JDM601_2378 3136adf5a4bce7adb76837eb41dbd167 358 SMART SM00382 58 189 1.5E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain JDM601_2378 3136adf5a4bce7adb76837eb41dbd167 358 SUPERFAMILY SSF52540 27 257 2.95E-50 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_2378 3136adf5a4bce7adb76837eb41dbd167 358 Gene3D G3DSA:3.40.50.300 26 188 8.9E-37 T 12-10-2018 JDM601_2378 3136adf5a4bce7adb76837eb41dbd167 358 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 358 160.708 T 12-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 JDM601_2378 3136adf5a4bce7adb76837eb41dbd167 358 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 260 333 1.9E-29 T 12-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 JDM601_2378 3136adf5a4bce7adb76837eb41dbd167 358 Gene3D G3DSA:1.10.8.60 189 263 4.5E-30 T 12-10-2018 JDM601_2378 3136adf5a4bce7adb76837eb41dbd167 358 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 31 334 3.0E-140 T 12-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 JDM601_3612 1a8b3b911dedd96ea8e65adde90ca041 138 PRINTS PR00332 Histidine triad family signature 91 101 3.1E-13 T 12-10-2018 IPR001310 Histidine triad (HIT) protein JDM601_3612 1a8b3b911dedd96ea8e65adde90ca041 138 PRINTS PR00332 Histidine triad family signature 29 47 3.1E-13 T 12-10-2018 IPR001310 Histidine triad (HIT) protein JDM601_3612 1a8b3b911dedd96ea8e65adde90ca041 138 PRINTS PR00332 Histidine triad family signature 8 24 3.1E-13 T 12-10-2018 IPR001310 Histidine triad (HIT) protein JDM601_3612 1a8b3b911dedd96ea8e65adde90ca041 138 ProSitePatterns PS00892 HIT domain signature. 84 102 - T 12-10-2018 IPR019808 Histidine triad, conserved site JDM601_3612 1a8b3b911dedd96ea8e65adde90ca041 138 SUPERFAMILY SSF54197 7 136 1.05E-31 T 12-10-2018 IPR036265 HIT-like superfamily JDM601_3612 1a8b3b911dedd96ea8e65adde90ca041 138 Pfam PF01230 HIT domain 15 105 3.1E-21 T 12-10-2018 IPR001310 Histidine triad (HIT) protein JDM601_3612 1a8b3b911dedd96ea8e65adde90ca041 138 Gene3D G3DSA:3.30.428.10 4 137 1.4E-36 T 12-10-2018 IPR036265 HIT-like superfamily JDM601_4068 5f81eb1610595ea0807bd57f84204d62 325 Pfam PF00107 Zinc-binding dehydrogenase 151 263 1.3E-25 T 12-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 JDM601_4068 5f81eb1610595ea0807bd57f84204d62 325 SUPERFAMILY SSF51735 111 267 3.41E-41 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_4068 5f81eb1610595ea0807bd57f84204d62 325 SUPERFAMILY SSF50129 4 141 5.82E-35 T 12-10-2018 IPR011032 GroES-like superfamily JDM601_4068 5f81eb1610595ea0807bd57f84204d62 325 TIGRFAM TIGR02824 quinone_pig3: putative NAD(P)H quinone oxidoreductase, PIG3 family 5 325 2.9E-131 T 12-10-2018 IPR014189 Quinone oxidoreductase PIG3 Reactome: R-HSA-6803205 JDM601_4068 5f81eb1610595ea0807bd57f84204d62 325 SMART SM00829 10 323 4.9E-36 T 12-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 JDM601_4068 5f81eb1610595ea0807bd57f84204d62 325 Gene3D G3DSA:3.90.180.10 13 323 4.6E-100 T 12-10-2018 JDM601_4068 5f81eb1610595ea0807bd57f84204d62 325 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 87 2.4E-9 T 12-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 JDM601_4068 5f81eb1610595ea0807bd57f84204d62 325 Gene3D G3DSA:3.40.50.720 120 259 4.6E-100 T 12-10-2018 JDM601_3613 2ad9fb97c32a25b67d3e9096679b0e3c 485 Pfam PF00512 His Kinase A (phospho-acceptor) domain 251 313 3.2E-16 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JDM601_3613 2ad9fb97c32a25b67d3e9096679b0e3c 485 Gene3D G3DSA:3.30.565.10 318 474 1.4E-44 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JDM601_3613 2ad9fb97c32a25b67d3e9096679b0e3c 485 SMART SM00388 250 314 3.5E-17 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JDM601_3613 2ad9fb97c32a25b67d3e9096679b0e3c 485 SMART SM00304 182 235 7.2E-11 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JDM601_3613 2ad9fb97c32a25b67d3e9096679b0e3c 485 Pfam PF00672 HAMP domain 183 231 2.0E-9 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JDM601_3613 2ad9fb97c32a25b67d3e9096679b0e3c 485 PRINTS PR00344 Bacterial sensor protein C-terminal signature 455 468 9.5E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JDM601_3613 2ad9fb97c32a25b67d3e9096679b0e3c 485 PRINTS PR00344 Bacterial sensor protein C-terminal signature 431 449 9.5E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JDM601_3613 2ad9fb97c32a25b67d3e9096679b0e3c 485 PRINTS PR00344 Bacterial sensor protein C-terminal signature 396 410 9.5E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JDM601_3613 2ad9fb97c32a25b67d3e9096679b0e3c 485 PRINTS PR00344 Bacterial sensor protein C-terminal signature 414 424 9.5E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JDM601_3613 2ad9fb97c32a25b67d3e9096679b0e3c 485 SUPERFAMILY SSF47384 241 314 4.12E-16 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 JDM601_3613 2ad9fb97c32a25b67d3e9096679b0e3c 485 SUPERFAMILY SSF55874 303 470 1.27E-45 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JDM601_3613 2ad9fb97c32a25b67d3e9096679b0e3c 485 Gene3D G3DSA:1.20.1480.50 149 239 7.1E-10 T 12-10-2018 JDM601_3613 2ad9fb97c32a25b67d3e9096679b0e3c 485 SMART SM00387 359 471 8.6E-41 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JDM601_3613 2ad9fb97c32a25b67d3e9096679b0e3c 485 Gene3D G3DSA:1.10.287.130 244 314 2.1E-20 T 12-10-2018 JDM601_3613 2ad9fb97c32a25b67d3e9096679b0e3c 485 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 359 468 1.5E-27 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JDM601_3613 2ad9fb97c32a25b67d3e9096679b0e3c 485 SUPERFAMILY SSF158472 185 232 7.59E-8 T 12-10-2018 JDM601_2783 3f8d717c4101deaba427206ea225057a 394 Pfam PF01494 FAD binding domain 6 309 6.4E-19 T 12-10-2018 IPR002938 FAD-binding domain GO:0071949 JDM601_2783 3f8d717c4101deaba427206ea225057a 394 SUPERFAMILY SSF51905 2 364 2.22E-48 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_2783 3f8d717c4101deaba427206ea225057a 394 Gene3D G3DSA:3.50.50.60 2 380 3.2E-80 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_2783 3f8d717c4101deaba427206ea225057a 394 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 148 163 9.6E-9 T 12-10-2018 JDM601_2783 3f8d717c4101deaba427206ea225057a 394 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 299 315 9.6E-9 T 12-10-2018 JDM601_2783 3f8d717c4101deaba427206ea225057a 394 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 6 28 9.6E-9 T 12-10-2018 JDM601_2783 3f8d717c4101deaba427206ea225057a 394 TIGRFAM TIGR02032 GG-red-SF: geranylgeranyl reductase family 5 318 1.1E-59 T 12-10-2018 IPR011777 Geranylgeranyl reductase family GO:0016628|GO:0055114 JDM601_2568 9b33d919b8412a7e7df05e792341cc82 152 SUPERFAMILY SSF47240 11 148 3.38E-39 T 12-10-2018 IPR009078 Ferritin-like superfamily JDM601_2568 9b33d919b8412a7e7df05e792341cc82 152 Gene3D G3DSA:1.20.1260.10 9 141 6.5E-43 T 12-10-2018 IPR012347 Ferritin-like JDM601_2568 9b33d919b8412a7e7df05e792341cc82 152 Pfam PF14530 Domain of unknown function (DUF4439) 15 151 3.4E-39 T 12-10-2018 IPR029447 Domain of unknown function DUF4439 JDM601_4320 5f26007627a474fbe1be981cb00d1a66 170 SUPERFAMILY SSF46785 41 149 2.38E-25 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JDM601_4320 5f26007627a474fbe1be981cb00d1a66 170 Gene3D G3DSA:1.10.10.10 15 152 2.1E-28 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JDM601_4320 5f26007627a474fbe1be981cb00d1a66 170 SMART SM00347 38 136 1.2E-17 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 JDM601_4320 5f26007627a474fbe1be981cb00d1a66 170 PRINTS PR00598 Bacterial regulatory protein MarR family signature 77 92 8.4E-6 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 JDM601_4320 5f26007627a474fbe1be981cb00d1a66 170 PRINTS PR00598 Bacterial regulatory protein MarR family signature 96 112 8.4E-6 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 JDM601_4320 5f26007627a474fbe1be981cb00d1a66 170 PRINTS PR00598 Bacterial regulatory protein MarR family signature 126 146 8.4E-6 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 JDM601_4320 5f26007627a474fbe1be981cb00d1a66 170 Pfam PF01047 MarR family 43 101 5.5E-17 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 JDM601_1781 424a58cb8bc46ebf0e041b844d9eaf6c 277 SUPERFAMILY SSF53335 6 260 3.82E-77 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JDM601_1781 424a58cb8bc46ebf0e041b844d9eaf6c 277 Pfam PF14801 tRNA methyltransferase complex GCD14 subunit N-term 4 54 2.5E-25 T 12-10-2018 JDM601_1781 424a58cb8bc46ebf0e041b844d9eaf6c 277 Gene3D G3DSA:3.10.330.20 1 67 5.6E-25 T 12-10-2018 JDM601_1781 424a58cb8bc46ebf0e041b844d9eaf6c 277 Gene3D G3DSA:3.40.50.150 68 277 8.7E-63 T 12-10-2018 JDM601_1781 424a58cb8bc46ebf0e041b844d9eaf6c 277 Pfam PF08704 tRNA methyltransferase complex GCD14 subunit 73 237 2.4E-21 T 12-10-2018 IPR014816 tRNA (1-methyladenosine) methyltransferase catalytic subunit Gcd14 GO:0016429|GO:0030488|GO:0031515 MetaCyc: PWY-6829 JDM601_1781 424a58cb8bc46ebf0e041b844d9eaf6c 277 PIRSF PIRSF017269 1 271 4.9E-89 T 12-10-2018 IPR014816 tRNA (1-methyladenosine) methyltransferase catalytic subunit Gcd14 GO:0016429|GO:0030488|GO:0031515 MetaCyc: PWY-6829 JDM601_1218 cfcd471c5e784df6f491526ac20cab1a 676 Gene3D G3DSA:1.20.1250.20 249 470 1.1E-18 T 12-10-2018 JDM601_1218 cfcd471c5e784df6f491526ac20cab1a 676 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 1 406 6.0E-85 T 12-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 JDM601_1218 cfcd471c5e784df6f491526ac20cab1a 676 Gene3D G3DSA:1.20.1720.10 1 201 1.0E-46 T 12-10-2018 JDM601_1218 cfcd471c5e784df6f491526ac20cab1a 676 SUPERFAMILY SSF103473 1 467 2.96E-64 T 12-10-2018 IPR036259 MFS transporter superfamily JDM601_1218 cfcd471c5e784df6f491526ac20cab1a 676 Pfam PF07690 Major Facilitator Superfamily 2 392 1.9E-53 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 JDM601_0296 257aba35d3d31a1f1af6348f461fac93 96 SUPERFAMILY SSF140453 3 96 6.28E-21 T 12-10-2018 IPR036689 ESAT-6-like superfamily JDM601_0296 257aba35d3d31a1f1af6348f461fac93 96 Gene3D G3DSA:1.10.287.1060 1 96 2.7E-47 T 12-10-2018 JDM601_0296 257aba35d3d31a1f1af6348f461fac93 96 Pfam PF06013 Proteins of 100 residues with WXG 4 88 3.9E-16 T 12-10-2018 IPR010310 Type VII secretion system ESAT-6-like JDM601_0296 257aba35d3d31a1f1af6348f461fac93 96 TIGRFAM TIGR03930 WXG100_ESAT6: WXG100 family type VII secretion target 4 92 2.8E-16 T 12-10-2018 IPR010310 Type VII secretion system ESAT-6-like JDM601_0296 257aba35d3d31a1f1af6348f461fac93 96 ProDom PD020150 ESAT-6-LIKE ANTIGEN ESXR CFP7 LOW WEIGHT ESXQ CFP-7 TB10.4 MOLECULAR 3 96 2.0E-39 T 12-10-2018 JDM601_0288 257aba35d3d31a1f1af6348f461fac93 96 SUPERFAMILY SSF140453 3 96 6.28E-21 T 12-10-2018 IPR036689 ESAT-6-like superfamily JDM601_0288 257aba35d3d31a1f1af6348f461fac93 96 Gene3D G3DSA:1.10.287.1060 1 96 2.7E-47 T 12-10-2018 JDM601_0288 257aba35d3d31a1f1af6348f461fac93 96 Pfam PF06013 Proteins of 100 residues with WXG 4 88 3.9E-16 T 12-10-2018 IPR010310 Type VII secretion system ESAT-6-like JDM601_0288 257aba35d3d31a1f1af6348f461fac93 96 TIGRFAM TIGR03930 WXG100_ESAT6: WXG100 family type VII secretion target 4 92 2.8E-16 T 12-10-2018 IPR010310 Type VII secretion system ESAT-6-like JDM601_0288 257aba35d3d31a1f1af6348f461fac93 96 ProDom PD020150 ESAT-6-LIKE ANTIGEN ESXR CFP7 LOW WEIGHT ESXQ CFP-7 TB10.4 MOLECULAR 3 96 2.0E-39 T 12-10-2018 JDM601_2133 4a58e242db7226306e17fa91024f9a51 272 Pfam PF00218 Indole-3-glycerol phosphate synthase 7 258 1.8E-81 T 12-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 JDM601_2133 4a58e242db7226306e17fa91024f9a51 272 Gene3D G3DSA:3.20.20.70 1 272 9.0E-113 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JDM601_2133 4a58e242db7226306e17fa91024f9a51 272 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 5 260 34.224 T 12-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 JDM601_2133 4a58e242db7226306e17fa91024f9a51 272 SUPERFAMILY SSF51366 16 260 7.25E-79 T 12-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 JDM601_2133 4a58e242db7226306e17fa91024f9a51 272 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 54 71 - T 12-10-2018 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48 JDM601_4142 4ed2fbfc1df486fa4f823a2375ebdc19 185 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 61 8.3E-16 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_4142 4ed2fbfc1df486fa4f823a2375ebdc19 185 Gene3D G3DSA:1.10.357.10 6 181 1.3E-26 T 12-10-2018 JDM601_4142 4ed2fbfc1df486fa4f823a2375ebdc19 185 SUPERFAMILY SSF46689 6 74 7.98E-19 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JDM601_4142 4ed2fbfc1df486fa4f823a2375ebdc19 185 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 15 28 1.2E-10 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_4142 4ed2fbfc1df486fa4f823a2375ebdc19 185 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 36 59 1.2E-10 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_2290 2613737a25d05cb9cb5f870e5848c346 225 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 31 45 - T 12-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 JDM601_2290 2613737a25d05cb9cb5f870e5848c346 225 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 5 213 5.7E-83 T 12-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 JDM601_2290 2613737a25d05cb9cb5f870e5848c346 225 Gene3D G3DSA:3.20.20.70 3 220 1.3E-80 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JDM601_2290 2613737a25d05cb9cb5f870e5848c346 225 PIRSF PIRSF001461 1 224 1.1E-92 T 12-10-2018 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 JDM601_2290 2613737a25d05cb9cb5f870e5848c346 225 SUPERFAMILY SSF51366 4 213 3.06E-66 T 12-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 JDM601_2290 2613737a25d05cb9cb5f870e5848c346 225 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 133 155 - T 12-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 JDM601_2290 2613737a25d05cb9cb5f870e5848c346 225 Pfam PF00834 Ribulose-phosphate 3 epimerase family 6 200 1.4E-80 T 12-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 JDM601_4346 9bf75bdd66d91dae16434eefa03da6ab 47 ProSitePatterns PS00784 Ribosomal protein L34 signature. 5 24 - T 12-10-2018 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 JDM601_4346 9bf75bdd66d91dae16434eefa03da6ab 47 Pfam PF00468 Ribosomal protein L34 5 47 2.5E-17 T 12-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JDM601_4346 9bf75bdd66d91dae16434eefa03da6ab 47 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 4 47 15.16 T 12-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JDM601_4346 9bf75bdd66d91dae16434eefa03da6ab 47 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 5 45 7.0E-14 T 12-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JDM601_4346 9bf75bdd66d91dae16434eefa03da6ab 47 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 5 47 2.4E-16 T 12-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JDM601_1954 37793371d3be742842913ab3d06fde26 793 Gene3D G3DSA:3.30.1540.10 229 320 2.9E-75 T 12-10-2018 JDM601_1954 37793371d3be742842913ab3d06fde26 793 SUPERFAMILY SSF89796 3 378 9.68E-70 T 12-10-2018 IPR023606 CoA-transferase family III domain superfamily JDM601_1954 37793371d3be742842913ab3d06fde26 793 Gene3D G3DSA:3.40.50.10540 396 783 2.1E-100 T 12-10-2018 IPR023606 CoA-transferase family III domain superfamily JDM601_1954 37793371d3be742842913ab3d06fde26 793 Pfam PF02515 CoA-transferase family III 398 765 4.4E-88 T 12-10-2018 IPR003673 CoA-transferase family III GO:0003824 JDM601_1954 37793371d3be742842913ab3d06fde26 793 Pfam PF02515 CoA-transferase family III 3 373 4.5E-65 T 12-10-2018 IPR003673 CoA-transferase family III GO:0003824 JDM601_1954 37793371d3be742842913ab3d06fde26 793 Gene3D G3DSA:3.40.50.10540 3 339 2.9E-75 T 12-10-2018 IPR023606 CoA-transferase family III domain superfamily JDM601_1954 37793371d3be742842913ab3d06fde26 793 SUPERFAMILY SSF89796 395 789 1.7E-86 T 12-10-2018 IPR023606 CoA-transferase family III domain superfamily JDM601_1954 37793371d3be742842913ab3d06fde26 793 Gene3D G3DSA:3.30.1540.10 624 715 2.1E-100 T 12-10-2018 JDM601_1292 62308ae50ec8283bea89bf379532e4cb 472 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 340 428 3.9E-14 T 12-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 JDM601_1292 62308ae50ec8283bea89bf379532e4cb 472 Gene3D G3DSA:2.40.37.10 51 467 1.5E-169 T 12-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 JDM601_1292 62308ae50ec8283bea89bf379532e4cb 472 SUPERFAMILY SSF51419 64 333 3.93E-73 T 12-10-2018 IPR029066 PLP-binding barrel JDM601_1292 62308ae50ec8283bea89bf379532e4cb 472 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 43 471 2.1E-147 T 12-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 JDM601_1292 62308ae50ec8283bea89bf379532e4cb 472 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 114 126 5.9E-17 T 12-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 JDM601_1292 62308ae50ec8283bea89bf379532e4cb 472 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 322 341 5.9E-17 T 12-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 JDM601_1292 62308ae50ec8283bea89bf379532e4cb 472 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 428 441 5.9E-17 T 12-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 JDM601_1292 62308ae50ec8283bea89bf379532e4cb 472 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 229 242 5.9E-17 T 12-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 JDM601_1292 62308ae50ec8283bea89bf379532e4cb 472 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 94 112 5.9E-17 T 12-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 JDM601_1292 62308ae50ec8283bea89bf379532e4cb 472 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 268 285 - T 12-10-2018 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site JDM601_1292 62308ae50ec8283bea89bf379532e4cb 472 SUPERFAMILY SSF50621 311 471 2.3E-48 T 12-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 JDM601_1292 62308ae50ec8283bea89bf379532e4cb 472 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 53 471 39.822 T 12-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 JDM601_1292 62308ae50ec8283bea89bf379532e4cb 472 PRINTS PR01181 Diaminopimelate decarboxylase signature 355 373 6.9E-28 T 12-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 JDM601_1292 62308ae50ec8283bea89bf379532e4cb 472 PRINTS PR01181 Diaminopimelate decarboxylase signature 112 129 6.9E-28 T 12-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 JDM601_1292 62308ae50ec8283bea89bf379532e4cb 472 PRINTS PR01181 Diaminopimelate decarboxylase signature 201 210 6.9E-28 T 12-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 JDM601_1292 62308ae50ec8283bea89bf379532e4cb 472 PRINTS PR01181 Diaminopimelate decarboxylase signature 438 460 6.9E-28 T 12-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 JDM601_1292 62308ae50ec8283bea89bf379532e4cb 472 Gene3D G3DSA:3.20.20.10 72 332 1.5E-169 T 12-10-2018 IPR029066 PLP-binding barrel JDM601_1292 62308ae50ec8283bea89bf379532e4cb 472 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 94 112 - T 12-10-2018 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site JDM601_1292 62308ae50ec8283bea89bf379532e4cb 472 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 74 331 6.2E-57 T 12-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 JDM601_3981 ef9ccea2d7eba6619ccafaea8f3a32fb 326 Gene3D G3DSA:3.40.50.150 264 326 1.3E-11 T 12-10-2018 JDM601_3981 ef9ccea2d7eba6619ccafaea8f3a32fb 326 Gene3D G3DSA:3.40.50.150 50 225 2.3E-57 T 12-10-2018 JDM601_3981 ef9ccea2d7eba6619ccafaea8f3a32fb 326 SUPERFAMILY SSF53335 42 318 3.61E-15 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JDM601_3981 ef9ccea2d7eba6619ccafaea8f3a32fb 326 PIRSF PIRSF018005 3 326 3.7E-133 T 12-10-2018 IPR017804 Methyltransferase EgtD-like GO:0008168 JDM601_3981 ef9ccea2d7eba6619ccafaea8f3a32fb 326 Hamap MF_02037 Histidine N-alpha-methyltransferase [egtD]. 10 326 53.7 T 12-10-2018 IPR032888 Histidine N-alpha-methyltransferase, Actinobacteria-type GO:0008276|GO:0052699 KEGG: 00340+2.1.1.44|MetaCyc: PWY-7255|MetaCyc: PWY-7550 JDM601_3981 ef9ccea2d7eba6619ccafaea8f3a32fb 326 Pfam PF10017 Histidine-specific methyltransferase, SAM-dependent 23 324 1.6E-111 T 12-10-2018 IPR019257 Histidine-specific methyltransferase, SAM-dependent JDM601_3981 ef9ccea2d7eba6619ccafaea8f3a32fb 326 TIGRFAM TIGR03438 egtD_ergothio: dimethylhistidine N-methyltransferase 23 323 1.3E-113 T 12-10-2018 IPR035094 Histidine N-alpha-methyltransferase KEGG: 00340+2.1.1.44|MetaCyc: PWY-7255|MetaCyc: PWY-7550 JDM601_4308 302eee23cfa6694371b6a7efe4e14ce7 70 ProSitePatterns PS01048 Ribosomal protein S6 signature. 18 27 - T 12-10-2018 IPR020815 Ribosomal protein S6, conserved site GO:0003735|GO:0005840|GO:0006412|GO:0019843 JDM601_4308 302eee23cfa6694371b6a7efe4e14ce7 70 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 69 11.395 T 12-10-2018 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 JDM601_4308 302eee23cfa6694371b6a7efe4e14ce7 70 TIGRFAM TIGR00166 S6: ribosomal protein bS6 3 68 9.8E-18 T 12-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JDM601_4308 302eee23cfa6694371b6a7efe4e14ce7 70 Pfam PF01250 Ribosomal protein S6 2 66 5.6E-20 T 12-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JDM601_4308 302eee23cfa6694371b6a7efe4e14ce7 70 SUPERFAMILY SSF54995 2 69 2.75E-22 T 12-10-2018 IPR035980 Ribosomal protein S6 superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JDM601_4308 302eee23cfa6694371b6a7efe4e14ce7 70 Gene3D G3DSA:3.30.70.60 1 70 1.1E-21 T 12-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 JDM601_4127 8f07dd73daf21fad05db81f2e18e1be0 392 Gene3D G3DSA:3.40.50.720 313 380 1.0E-19 T 12-10-2018 JDM601_4127 8f07dd73daf21fad05db81f2e18e1be0 392 SUPERFAMILY SSF54373 247 319 3.34E-23 T 12-10-2018 JDM601_4127 8f07dd73daf21fad05db81f2e18e1be0 392 Pfam PF13450 NAD(P)-binding Rossmann-like domain 1 69 1.7E-17 T 12-10-2018 JDM601_4127 8f07dd73daf21fad05db81f2e18e1be0 392 Gene3D G3DSA:3.40.50.720 1 84 1.3E-29 T 12-10-2018 JDM601_4127 8f07dd73daf21fad05db81f2e18e1be0 392 Gene3D G3DSA:3.40.50.720 110 260 9.4E-28 T 12-10-2018 JDM601_4127 8f07dd73daf21fad05db81f2e18e1be0 392 Pfam PF03275 UDP-galactopyranose mutase 144 355 2.0E-79 T 12-10-2018 IPR015899 UDP-galactopyranose mutase, C-terminal GO:0008767 KEGG: 00052+5.4.99.9|KEGG: 00520+5.4.99.9|MetaCyc: PWY-6397|MetaCyc: PWY-7328|MetaCyc: PWY-7622 JDM601_4127 8f07dd73daf21fad05db81f2e18e1be0 392 TIGRFAM TIGR00031 UDP-GALP_mutase: UDP-galactopyranose mutase 1 373 6.1E-98 T 12-10-2018 IPR004379 UDP-galactopyranose mutase GO:0008767 KEGG: 00052+5.4.99.9|KEGG: 00520+5.4.99.9|MetaCyc: PWY-6397|MetaCyc: PWY-7328|MetaCyc: PWY-7622 JDM601_4127 8f07dd73daf21fad05db81f2e18e1be0 392 SUPERFAMILY SSF51971 1 373 3.24E-42 T 12-10-2018 JDM601_3006 11e1e32afeaed7f52c1484946cc42c50 460 Gene3D G3DSA:3.30.310.50 367 450 2.8E-17 T 12-10-2018 JDM601_3006 11e1e32afeaed7f52c1484946cc42c50 460 SUPERFAMILY SSF53738 259 362 1.06E-30 T 12-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JDM601_3006 11e1e32afeaed7f52c1484946cc42c50 460 SUPERFAMILY SSF55957 366 452 7.33E-18 T 12-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JDM601_3006 11e1e32afeaed7f52c1484946cc42c50 460 SUPERFAMILY SSF53738 151 254 8.24E-28 T 12-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JDM601_3006 11e1e32afeaed7f52c1484946cc42c50 460 Gene3D G3DSA:3.40.120.10 249 366 1.7E-35 T 12-10-2018 JDM601_3006 11e1e32afeaed7f52c1484946cc42c50 460 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 3 117 7.1E-31 T 12-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JDM601_3006 11e1e32afeaed7f52c1484946cc42c50 460 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 168 187 2.6E-22 T 12-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JDM601_3006 11e1e32afeaed7f52c1484946cc42c50 460 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 203 216 2.6E-22 T 12-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JDM601_3006 11e1e32afeaed7f52c1484946cc42c50 460 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 232 247 2.6E-22 T 12-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JDM601_3006 11e1e32afeaed7f52c1484946cc42c50 460 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 88 102 2.6E-22 T 12-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JDM601_3006 11e1e32afeaed7f52c1484946cc42c50 460 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 262 366 9.4E-26 T 12-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JDM601_3006 11e1e32afeaed7f52c1484946cc42c50 460 SUPERFAMILY SSF53738 2 117 1.1E-31 T 12-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JDM601_3006 11e1e32afeaed7f52c1484946cc42c50 460 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 372 449 4.5E-12 T 12-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JDM601_3006 11e1e32afeaed7f52c1484946cc42c50 460 Gene3D G3DSA:3.40.120.10 170 248 7.5E-30 T 12-10-2018 JDM601_3006 11e1e32afeaed7f52c1484946cc42c50 460 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 152 252 9.0E-24 T 12-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JDM601_3006 11e1e32afeaed7f52c1484946cc42c50 460 Gene3D G3DSA:3.40.120.10 1 140 7.3E-41 T 12-10-2018 JDM601_1049 572cf49441e0bfc8d809099cfb1acc82 195 SUPERFAMILY SSF46689 9 77 4.27E-14 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JDM601_1049 572cf49441e0bfc8d809099cfb1acc82 195 Pfam PF00440 Bacterial regulatory proteins, tetR family 17 62 5.9E-12 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_1049 572cf49441e0bfc8d809099cfb1acc82 195 Gene3D G3DSA:1.10.357.10 2 186 1.1E-21 T 12-10-2018 JDM601_1049 572cf49441e0bfc8d809099cfb1acc82 195 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 38 61 3.5E-6 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_1049 572cf49441e0bfc8d809099cfb1acc82 195 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 17 30 3.5E-6 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_3480 ef652998dfc6fc87e1f749c44ac8e463 228 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 106 122 7.9E-34 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3480 ef652998dfc6fc87e1f749c44ac8e463 228 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 151 7.9E-34 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3480 ef652998dfc6fc87e1f749c44ac8e463 228 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 59 70 7.9E-34 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3480 ef652998dfc6fc87e1f749c44ac8e463 228 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 170 7.9E-34 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3480 ef652998dfc6fc87e1f749c44ac8e463 228 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 190 210 7.9E-34 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3480 ef652998dfc6fc87e1f749c44ac8e463 228 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 1 163 0.0036 T 12-10-2018 JDM601_3480 ef652998dfc6fc87e1f749c44ac8e463 228 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 59 70 2.1E-10 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3480 ef652998dfc6fc87e1f749c44ac8e463 228 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 112 120 2.1E-10 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3480 ef652998dfc6fc87e1f749c44ac8e463 228 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 151 2.1E-10 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3480 ef652998dfc6fc87e1f749c44ac8e463 228 Gene3D G3DSA:3.40.50.720 1 228 5.9E-76 T 12-10-2018 JDM601_3480 ef652998dfc6fc87e1f749c44ac8e463 228 SUPERFAMILY SSF51735 1 226 2.61E-76 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_3480 ef652998dfc6fc87e1f749c44ac8e463 228 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 119 147 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 JDM601_3480 ef652998dfc6fc87e1f749c44ac8e463 228 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 3 225 2.5E-59 T 12-10-2018 JDM601_2849 5edc81512d6d24460fe152508ad1efd7 463 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 332 459 4.1E-28 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 JDM601_2849 5edc81512d6d24460fe152508ad1efd7 463 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 223 312 1.9E-11 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 JDM601_2849 5edc81512d6d24460fe152508ad1efd7 463 Gene3D G3DSA:2.40.110.10 222 328 4.3E-17 T 12-10-2018 JDM601_2849 5edc81512d6d24460fe152508ad1efd7 463 SUPERFAMILY SSF47203 334 460 5.32E-35 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 JDM601_2849 5edc81512d6d24460fe152508ad1efd7 463 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 106 215 1.3E-22 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 JDM601_2849 5edc81512d6d24460fe152508ad1efd7 463 Gene3D G3DSA:1.10.540.10 92 219 3.2E-26 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 JDM601_2849 5edc81512d6d24460fe152508ad1efd7 463 Gene3D G3DSA:1.20.140.10 329 463 2.0E-34 T 12-10-2018 JDM601_2849 5edc81512d6d24460fe152508ad1efd7 463 SUPERFAMILY SSF56645 99 322 9.29E-47 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 JDM601_2849 5edc81512d6d24460fe152508ad1efd7 463 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 431 450 - T 12-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 JDM601_2600 be6852bace5834539457e5e02d480055 221 Hamap MF_01220_B Uridylate kinase [pyrH]. 1 220 37.711 T 12-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 JDM601_2600 be6852bace5834539457e5e02d480055 221 Gene3D G3DSA:3.40.1160.10 2 221 5.0E-72 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily JDM601_2600 be6852bace5834539457e5e02d480055 221 SUPERFAMILY SSF53633 3 220 2.36E-67 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily JDM601_2600 be6852bace5834539457e5e02d480055 221 PIRSF PIRSF005650 2 221 1.5E-79 T 12-10-2018 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22 JDM601_2600 be6852bace5834539457e5e02d480055 221 Pfam PF00696 Amino acid kinase family 2 199 1.1E-29 T 12-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 JDM601_2600 be6852bace5834539457e5e02d480055 221 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 6 220 2.5E-82 T 12-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 JDM601_0431 a7a0e8b28968c0312f28f8d0c7a41a25 541 SUPERFAMILY SSF48592 9 518 9.16E-73 T 12-10-2018 IPR027413 GroEL-like equatorial domain superfamily JDM601_0431 a7a0e8b28968c0312f28f8d0c7a41a25 541 SUPERFAMILY SSF54849 136 200 1.26E-26 T 12-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily JDM601_0431 a7a0e8b28968c0312f28f8d0c7a41a25 541 Pfam PF00118 TCP-1/cpn60 chaperonin family 22 522 6.7E-97 T 12-10-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 JDM601_0431 a7a0e8b28968c0312f28f8d0c7a41a25 541 PRINTS PR00298 60kDa chaperonin signature 348 373 1.8E-70 T 12-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 JDM601_0431 a7a0e8b28968c0312f28f8d0c7a41a25 541 PRINTS PR00298 60kDa chaperonin signature 26 52 1.8E-70 T 12-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 JDM601_0431 a7a0e8b28968c0312f28f8d0c7a41a25 541 PRINTS PR00298 60kDa chaperonin signature 266 289 1.8E-70 T 12-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 JDM601_0431 a7a0e8b28968c0312f28f8d0c7a41a25 541 PRINTS PR00298 60kDa chaperonin signature 82 109 1.8E-70 T 12-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 JDM601_0431 a7a0e8b28968c0312f28f8d0c7a41a25 541 PRINTS PR00298 60kDa chaperonin signature 396 417 1.8E-70 T 12-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 JDM601_0431 a7a0e8b28968c0312f28f8d0c7a41a25 541 SUPERFAMILY SSF52029 185 374 1.36E-80 T 12-10-2018 IPR027409 GroEL-like apical domain superfamily JDM601_0431 a7a0e8b28968c0312f28f8d0c7a41a25 541 TIGRFAM TIGR02348 GroEL: chaperonin GroL 2 524 2.4E-250 T 12-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 JDM601_0431 a7a0e8b28968c0312f28f8d0c7a41a25 541 Gene3D G3DSA:3.50.7.10 190 371 8.5E-222 T 12-10-2018 IPR027409 GroEL-like apical domain superfamily JDM601_0431 a7a0e8b28968c0312f28f8d0c7a41a25 541 Gene3D G3DSA:1.10.560.10 7 518 8.5E-222 T 12-10-2018 IPR027413 GroEL-like equatorial domain superfamily JDM601_0431 a7a0e8b28968c0312f28f8d0c7a41a25 541 ProSitePatterns PS00296 Chaperonins cpn60 signature. 403 414 - T 12-10-2018 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 JDM601_0431 a7a0e8b28968c0312f28f8d0c7a41a25 541 Gene3D G3DSA:3.30.260.10 136 408 8.5E-222 T 12-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily JDM601_0431 a7a0e8b28968c0312f28f8d0c7a41a25 541 Hamap MF_00600 60 kDa chaperonin [groL]. 1 539 41.044 T 12-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 JDM601_2907 2b18041a31f3234186023fb17b7bbd5a 417 TIGRFAM TIGR03624 TIGR03624: putative hydrolase 35 386 4.6E-119 T 12-10-2018 IPR018766 Zinicin-like metallopeptidase type 2 JDM601_2907 2b18041a31f3234186023fb17b7bbd5a 417 Pfam PF10103 Zincin-like metallopeptidase 35 383 7.9E-112 T 12-10-2018 IPR018766 Zinicin-like metallopeptidase type 2 JDM601_2907 2b18041a31f3234186023fb17b7bbd5a 417 SUPERFAMILY SSF55486 34 386 4.91E-109 T 12-10-2018 JDM601_4104 d6a8a1d0c8ba2432672ea9bc5a8dc226 1071 Gene3D G3DSA:2.60.120.940 717 940 3.7E-66 T 12-10-2018 JDM601_4104 d6a8a1d0c8ba2432672ea9bc5a8dc226 1071 Pfam PF14896 EmbC C-terminal domain 675 1068 1.1E-147 T 12-10-2018 IPR032731 Arabinosyltransferase, C-terminal JDM601_4104 d6a8a1d0c8ba2432672ea9bc5a8dc226 1071 Gene3D G3DSA:2.60.120.610 16 187 9.2E-46 T 12-10-2018 IPR027451 Arabinofuranosyltransferase, domain 1 JDM601_4104 d6a8a1d0c8ba2432672ea9bc5a8dc226 1071 Pfam PF04602 Mycobacterial cell wall arabinan synthesis protein 1 640 9.4E-250 T 12-10-2018 IPR007680 Arabinofuranosyltransferase, N-terminal GO:0052636|GO:0071766 JDM601_3073 b2fe7a2b7e97ba26b11c8d1a823e03fb 224 Pfam PF03167 Uracil DNA glycosylase superfamily 43 207 2.0E-40 T 12-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 JDM601_3073 b2fe7a2b7e97ba26b11c8d1a823e03fb 224 Gene3D G3DSA:3.40.470.10 8 215 2.2E-57 T 12-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 JDM601_3073 b2fe7a2b7e97ba26b11c8d1a823e03fb 224 TIGRFAM TIGR00758 UDG_fam4: uracil-DNA glycosylase, family 4 29 197 4.2E-40 T 12-10-2018 IPR005273 Uracil-DNA glycosylase family 4 JDM601_3073 b2fe7a2b7e97ba26b11c8d1a823e03fb 224 SUPERFAMILY SSF52141 19 211 2.16E-52 T 12-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 JDM601_3073 b2fe7a2b7e97ba26b11c8d1a823e03fb 224 SMART SM00987 43 207 3.1E-38 T 12-10-2018 JDM601_3073 b2fe7a2b7e97ba26b11c8d1a823e03fb 224 SMART SM00986 43 207 3.1E-38 T 12-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 JDM601_3073 b2fe7a2b7e97ba26b11c8d1a823e03fb 224 TIGRFAM TIGR03914 UDG_fam_dom: uracil-DNA glycosylase family domain 15 208 1.7E-77 T 12-10-2018 IPR005273 Uracil-DNA glycosylase family 4 JDM601_1417 995d217f2d9d50ba4113e5d23125c73e 440 Gene3D G3DSA:3.40.640.10 122 335 2.6E-40 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 JDM601_1417 995d217f2d9d50ba4113e5d23125c73e 440 Gene3D G3DSA:3.90.1150.10 93 421 2.6E-40 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 JDM601_1417 995d217f2d9d50ba4113e5d23125c73e 440 SUPERFAMILY SSF53383 71 427 2.67E-53 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase JDM601_1417 995d217f2d9d50ba4113e5d23125c73e 440 SMART SM00345 15 74 7.1E-15 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 JDM601_1417 995d217f2d9d50ba4113e5d23125c73e 440 Gene3D G3DSA:1.10.10.10 13 85 8.7E-19 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JDM601_1417 995d217f2d9d50ba4113e5d23125c73e 440 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 74 2.3E-14 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 JDM601_1417 995d217f2d9d50ba4113e5d23125c73e 440 SUPERFAMILY SSF46785 13 84 6.31E-16 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JDM601_1417 995d217f2d9d50ba4113e5d23125c73e 440 Pfam PF00155 Aminotransferase class I and II 147 427 2.0E-17 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 JDM601_0341 0f2596a1c95fc7227d4d8d4485ff0a4b 124 Gene3D G3DSA:1.10.1660.10 1 115 7.6E-23 T 12-10-2018 JDM601_0341 0f2596a1c95fc7227d4d8d4485ff0a4b 124 Pfam PF13411 MerR HTH family regulatory protein 13 78 7.4E-17 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 JDM601_0341 0f2596a1c95fc7227d4d8d4485ff0a4b 124 SUPERFAMILY SSF46955 12 102 4.58E-20 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily JDM601_0341 0f2596a1c95fc7227d4d8d4485ff0a4b 124 SMART SM00422 11 80 2.5E-27 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 JDM601_0591 7ec6a7950443faf114584846b0c1d4e1 331 SUPERFAMILY SSF56300 10 153 5.7E-30 T 12-10-2018 JDM601_0591 7ec6a7950443faf114584846b0c1d4e1 331 Pfam PF00149 Calcineurin-like phosphoesterase 11 139 5.4E-9 T 12-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 JDM601_3066 254f7cc9855b286811fa8bdbc4685db6 103 Gene3D G3DSA:1.10.287.110 2 72 1.3E-11 T 12-10-2018 IPR036869 Chaperone J-domain superfamily JDM601_3066 254f7cc9855b286811fa8bdbc4685db6 103 PRINTS PR00625 DnaJ domain signature 49 69 3.7E-5 T 12-10-2018 IPR001623 DnaJ domain JDM601_3066 254f7cc9855b286811fa8bdbc4685db6 103 PRINTS PR00625 DnaJ domain signature 10 28 3.7E-5 T 12-10-2018 IPR001623 DnaJ domain JDM601_3066 254f7cc9855b286811fa8bdbc4685db6 103 PRINTS PR00625 DnaJ domain signature 28 43 3.7E-5 T 12-10-2018 IPR001623 DnaJ domain JDM601_3066 254f7cc9855b286811fa8bdbc4685db6 103 SUPERFAMILY SSF46565 3 65 6.41E-13 T 12-10-2018 IPR036869 Chaperone J-domain superfamily JDM601_3066 254f7cc9855b286811fa8bdbc4685db6 103 SMART SM00271 7 69 2.6E-5 T 12-10-2018 IPR001623 DnaJ domain JDM601_3066 254f7cc9855b286811fa8bdbc4685db6 103 Pfam PF00226 DnaJ domain 8 65 6.2E-10 T 12-10-2018 IPR001623 DnaJ domain JDM601_2314 61ee76d1ac9b06d358fde07a54fe9d6d 430 SUPERFAMILY SSF51338 3 428 3.67E-25 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 JDM601_2314 61ee76d1ac9b06d358fde07a54fe9d6d 430 SUPERFAMILY SSF51556 52 367 1.14E-99 T 12-10-2018 IPR032466 Metal-dependent hydrolase JDM601_2314 61ee76d1ac9b06d358fde07a54fe9d6d 430 Gene3D G3DSA:2.30.40.10 12 421 1.6E-132 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 JDM601_2314 61ee76d1ac9b06d358fde07a54fe9d6d 430 ProSitePatterns PS00483 Dihydroorotase signature 2. 302 313 - T 12-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 JDM601_2314 61ee76d1ac9b06d358fde07a54fe9d6d 430 Pfam PF01979 Amidohydrolase family 48 421 1.6E-22 T 12-10-2018 IPR006680 Amidohydrolase-related GO:0016787 JDM601_2314 61ee76d1ac9b06d358fde07a54fe9d6d 430 Gene3D G3DSA:3.20.20.140 53 368 1.6E-132 T 12-10-2018 JDM601_2314 61ee76d1ac9b06d358fde07a54fe9d6d 430 TIGRFAM TIGR00857 pyrC_multi: dihydroorotase, multifunctional complex type 14 426 2.9E-151 T 12-10-2018 JDM601_2314 61ee76d1ac9b06d358fde07a54fe9d6d 430 Hamap MF_00220_B Dihydroorotase [pyrC]. 3 425 43.434 T 12-10-2018 IPR004722 Dihydroorotase GO:0004151|GO:0006221|GO:0046872 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 JDM601_2252 242ac8afa8f9065cd4c726baf44b220c 264 SMART SM00382 38 239 1.0E-5 T 12-10-2018 IPR003593 AAA+ ATPase domain JDM601_2252 242ac8afa8f9065cd4c726baf44b220c 264 TIGRFAM TIGR01978 sufC: FeS assembly ATPase SufC 4 252 4.1E-100 T 12-10-2018 IPR010230 FeS cluster assembly SUF system, ATPase SufC GO:0005524 JDM601_2252 242ac8afa8f9065cd4c726baf44b220c 264 Pfam PF00005 ABC transporter 29 180 2.8E-21 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JDM601_2252 242ac8afa8f9065cd4c726baf44b220c 264 Gene3D G3DSA:3.40.50.300 3 257 8.3E-51 T 12-10-2018 JDM601_2252 242ac8afa8f9065cd4c726baf44b220c 264 SUPERFAMILY SSF52540 4 240 2.54E-40 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_3433 c791de4c5b644aedcc59625855fb3966 793 SUPERFAMILY SSF89796 2 363 1.96E-72 T 12-10-2018 IPR023606 CoA-transferase family III domain superfamily JDM601_3433 c791de4c5b644aedcc59625855fb3966 793 Gene3D G3DSA:3.40.50.10540 384 782 4.7E-124 T 12-10-2018 IPR023606 CoA-transferase family III domain superfamily JDM601_3433 c791de4c5b644aedcc59625855fb3966 793 Gene3D G3DSA:3.30.1540.10 616 715 4.7E-124 T 12-10-2018 JDM601_3433 c791de4c5b644aedcc59625855fb3966 793 Pfam PF02515 CoA-transferase family III 386 765 4.5E-98 T 12-10-2018 IPR003673 CoA-transferase family III GO:0003824 JDM601_3433 c791de4c5b644aedcc59625855fb3966 793 Pfam PF02515 CoA-transferase family III 4 361 3.5E-65 T 12-10-2018 IPR003673 CoA-transferase family III GO:0003824 JDM601_3433 c791de4c5b644aedcc59625855fb3966 793 SUPERFAMILY SSF89796 382 788 1.57E-109 T 12-10-2018 IPR023606 CoA-transferase family III domain superfamily JDM601_3433 c791de4c5b644aedcc59625855fb3966 793 Gene3D G3DSA:3.30.1540.10 224 309 6.8E-72 T 12-10-2018 JDM601_3433 c791de4c5b644aedcc59625855fb3966 793 Gene3D G3DSA:3.40.50.10540 3 343 6.8E-72 T 12-10-2018 IPR023606 CoA-transferase family III domain superfamily JDM601_3286 824780175252fae76734f845a15fa255 285 Gene3D G3DSA:3.20.20.30 124 267 5.3E-12 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 JDM601_3286 824780175252fae76734f845a15fa255 285 Gene3D G3DSA:3.20.20.30 21 123 2.8E-11 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 JDM601_3286 824780175252fae76734f845a15fa255 285 TIGRFAM TIGR03620 F420_MSMEG_4141: probable F420-dependent oxidoreductase, MSMEG_4141 family 24 278 3.6E-114 T 12-10-2018 IPR019922 Luciferase-like, F420-dependent oxidoreductase, MSMEG4141, predicted JDM601_3286 824780175252fae76734f845a15fa255 285 Pfam PF00296 Luciferase-like monooxygenase 25 122 2.1E-9 T 12-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 JDM601_3286 824780175252fae76734f845a15fa255 285 SUPERFAMILY SSF51679 25 269 7.8E-35 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 JDM601_3414 f75685b93951917bd6282464f949cfca 492 SUPERFAMILY SSF56801 13 489 3.14E-86 T 12-10-2018 JDM601_3414 f75685b93951917bd6282464f949cfca 492 Gene3D G3DSA:3.40.50.12780 4 385 1.7E-53 T 12-10-2018 JDM601_3414 f75685b93951917bd6282464f949cfca 492 Gene3D G3DSA:3.30.300.30 388 491 2.8E-21 T 12-10-2018 JDM601_3414 f75685b93951917bd6282464f949cfca 492 Pfam PF13193 AMP-binding enzyme C-terminal domain 402 475 5.4E-16 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain JDM601_3414 f75685b93951917bd6282464f949cfca 492 Pfam PF00501 AMP-binding enzyme 18 392 1.0E-38 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 JDM601_1118 dd19b7946672e2cad61d0005b058cad0 263 Gene3D G3DSA:3.90.226.10 1 202 8.2E-79 T 12-10-2018 JDM601_1118 dd19b7946672e2cad61d0005b058cad0 263 SUPERFAMILY SSF52096 5 262 1.29E-79 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily JDM601_1118 dd19b7946672e2cad61d0005b058cad0 263 Pfam PF00378 Enoyl-CoA hydratase/isomerase 12 262 2.4E-60 T 12-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 JDM601_1118 dd19b7946672e2cad61d0005b058cad0 263 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 101 121 - T 12-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 JDM601_1118 dd19b7946672e2cad61d0005b058cad0 263 Gene3D G3DSA:1.10.12.10 203 263 8.1E-28 T 12-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal JDM601_1925 afd423648c8ba4b04d20db9fc0210f6b 212 Gene3D G3DSA:1.10.1660.10 52 123 2.3E-11 T 12-10-2018 JDM601_1925 afd423648c8ba4b04d20db9fc0210f6b 212 SUPERFAMILY SSF46955 57 139 1.6E-13 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily JDM601_1925 afd423648c8ba4b04d20db9fc0210f6b 212 Pfam PF13411 MerR HTH family regulatory protein 56 121 7.4E-13 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 JDM601_1925 afd423648c8ba4b04d20db9fc0210f6b 212 SMART SM00422 52 124 9.5E-19 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 JDM601_3499 f9172b3195cd2d9207a32b56fa6bd640 69 Pfam PF13459 4Fe-4S single cluster domain 4 59 7.1E-16 T 12-10-2018 JDM601_3499 f9172b3195cd2d9207a32b56fa6bd640 69 SUPERFAMILY SSF54862 3 60 1.56E-12 T 12-10-2018 JDM601_3499 f9172b3195cd2d9207a32b56fa6bd640 69 PRINTS PR00352 3Fe-4S ferredoxin signature 47 59 2.1E-6 T 12-10-2018 IPR001080 3Fe-4S ferredoxin GO:0005506|GO:0009055 JDM601_3499 f9172b3195cd2d9207a32b56fa6bd640 69 PRINTS PR00352 3Fe-4S ferredoxin signature 16 26 2.1E-6 T 12-10-2018 IPR001080 3Fe-4S ferredoxin GO:0005506|GO:0009055 JDM601_3499 f9172b3195cd2d9207a32b56fa6bd640 69 PRINTS PR00352 3Fe-4S ferredoxin signature 5 16 2.1E-6 T 12-10-2018 IPR001080 3Fe-4S ferredoxin GO:0005506|GO:0009055 JDM601_3499 f9172b3195cd2d9207a32b56fa6bd640 69 Gene3D G3DSA:3.30.70.20 1 62 1.8E-21 T 12-10-2018 JDM601_2318 cac6f3014f5d7202fd35dfc5eb655289 383 Gene3D G3DSA:1.20.140.10 201 379 6.6E-33 T 12-10-2018 JDM601_2318 cac6f3014f5d7202fd35dfc5eb655289 383 SUPERFAMILY SSF56645 8 197 4.32E-36 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 JDM601_2318 cac6f3014f5d7202fd35dfc5eb655289 383 PIRSF PIRSF016578 2 381 5.9E-111 T 12-10-2018 JDM601_2318 cac6f3014f5d7202fd35dfc5eb655289 383 SUPERFAMILY SSF47203 218 356 2.09E-10 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 JDM601_2318 cac6f3014f5d7202fd35dfc5eb655289 383 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 10 97 3.2E-6 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 JDM601_2318 cac6f3014f5d7202fd35dfc5eb655289 383 Gene3D G3DSA:2.40.110.10 107 197 2.6E-28 T 12-10-2018 JDM601_2318 cac6f3014f5d7202fd35dfc5eb655289 383 Gene3D G3DSA:1.10.540.10 6 104 1.6E-26 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 JDM601_2318 cac6f3014f5d7202fd35dfc5eb655289 383 Pfam PF08028 Acyl-CoA dehydrogenase, C-terminal domain 229 360 1.2E-26 T 12-10-2018 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain JDM601_0659 fcf07017e3714ea36cfff8f21cceb854 145 Gene3D G3DSA:3.10.129.10 1 145 1.7E-48 T 12-10-2018 JDM601_0659 fcf07017e3714ea36cfff8f21cceb854 145 SUPERFAMILY SSF54637 6 125 2.1E-26 T 12-10-2018 IPR029069 HotDog domain superfamily JDM601_0659 fcf07017e3714ea36cfff8f21cceb854 145 Pfam PF01575 MaoC like domain 17 126 8.2E-29 T 12-10-2018 IPR002539 MaoC-like dehydratase domain JDM601_1791 ca3f371c5744982f4c059c39d229c77c 502 TIGRFAM TIGR03688 pupylate_PafA2: proteasome accessory factor PafA2 2 489 1.0E-240 T 12-10-2018 IPR022366 Pup deamidase GO:0008233|GO:0016811 JDM601_1791 ca3f371c5744982f4c059c39d229c77c 502 Pfam PF03136 Pup-ligase protein 3 458 3.9E-180 T 12-10-2018 IPR004347 Pup ligase/deamidase GO:0010498|GO:0019941 MetaCyc: PWY-7893 JDM601_1791 ca3f371c5744982f4c059c39d229c77c 502 PIRSF PIRSF018077 8 500 5.0E-216 T 12-10-2018 IPR004347 Pup ligase/deamidase GO:0010498|GO:0019941 MetaCyc: PWY-7893 JDM601_3436 f9dac76cccdd6fb3da822c4fa3e32383 414 SUPERFAMILY SSF55920 171 412 4.32E-43 T 12-10-2018 IPR036005 Creatinase/aminopeptidase-like JDM601_3436 f9dac76cccdd6fb3da822c4fa3e32383 414 SUPERFAMILY SSF53092 32 165 4.88E-11 T 12-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal JDM601_3436 f9dac76cccdd6fb3da822c4fa3e32383 414 Gene3D G3DSA:3.90.230.10 172 409 1.6E-41 T 12-10-2018 JDM601_3436 f9dac76cccdd6fb3da822c4fa3e32383 414 Gene3D G3DSA:3.40.350.10 4 171 9.0E-17 T 12-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal JDM601_3436 f9dac76cccdd6fb3da822c4fa3e32383 414 Pfam PF00557 Metallopeptidase family M24 180 398 1.2E-26 T 12-10-2018 IPR000994 Peptidase M24 JDM601_3436 f9dac76cccdd6fb3da822c4fa3e32383 414 Pfam PF01321 Creatinase/Prolidase N-terminal domain 32 166 1.0E-7 T 12-10-2018 IPR000587 Creatinase, N-terminal GO:0016787 JDM601_4050 5d8085142b4b176c7665a270e40a8af0 348 Hamap MF_01513 Putative phenylalanine aminotransferase [pat]. 5 348 44.75 T 12-10-2018 IPR024892 Putative phenylalanine aminotransferase JDM601_4050 5d8085142b4b176c7665a270e40a8af0 348 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 4 348 48.7 T 12-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 JDM601_4050 5d8085142b4b176c7665a270e40a8af0 348 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 6 343 4.6E-86 T 12-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 JDM601_4050 5d8085142b4b176c7665a270e40a8af0 348 Gene3D G3DSA:3.40.640.10 36 260 3.1E-130 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 JDM601_4050 5d8085142b4b176c7665a270e40a8af0 348 SUPERFAMILY SSF53383 17 342 2.45E-76 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase JDM601_4050 5d8085142b4b176c7665a270e40a8af0 348 Pfam PF00155 Aminotransferase class I and II 25 341 2.1E-45 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 JDM601_4050 5d8085142b4b176c7665a270e40a8af0 348 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 212 221 - T 12-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 JDM601_4050 5d8085142b4b176c7665a270e40a8af0 348 Gene3D G3DSA:3.90.1150.10 10 341 3.1E-130 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 JDM601_1837 e440b53dac37efec1ace98e942d9864b 470 ProSitePatterns PS00163 Fumarate lyases signature. 281 290 - T 12-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 JDM601_1837 e440b53dac37efec1ace98e942d9864b 470 Gene3D G3DSA:1.10.275.10 30 235 2.3E-158 T 12-10-2018 IPR024083 Fumarase/histidase, N-terminal JDM601_1837 e440b53dac37efec1ace98e942d9864b 470 Gene3D G3DSA:1.20.200.10 125 454 2.3E-158 T 12-10-2018 JDM601_1837 e440b53dac37efec1ace98e942d9864b 470 PRINTS PR00149 Fumarate lyase superfamily signature 237 264 1.5E-26 T 12-10-2018 IPR000362 Fumarate lyase family JDM601_1837 e440b53dac37efec1ace98e942d9864b 470 PRINTS PR00149 Fumarate lyase superfamily signature 281 297 1.5E-26 T 12-10-2018 IPR000362 Fumarate lyase family JDM601_1837 e440b53dac37efec1ace98e942d9864b 470 PRINTS PR00149 Fumarate lyase superfamily signature 153 171 1.5E-26 T 12-10-2018 IPR000362 Fumarate lyase family JDM601_1837 e440b53dac37efec1ace98e942d9864b 470 PRINTS PR00149 Fumarate lyase superfamily signature 108 126 1.5E-26 T 12-10-2018 IPR000362 Fumarate lyase family JDM601_1837 e440b53dac37efec1ace98e942d9864b 470 Hamap MF_00006 Argininosuccinate lyase [argH]. 7 459 38.541 T 12-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 JDM601_1837 e440b53dac37efec1ace98e942d9864b 470 SUPERFAMILY SSF48557 11 460 8.8E-130 T 12-10-2018 IPR008948 L-Aspartase-like GO:0003824 JDM601_1837 e440b53dac37efec1ace98e942d9864b 470 TIGRFAM TIGR00838 argH: argininosuccinate lyase 8 460 1.1E-181 T 12-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 JDM601_1837 e440b53dac37efec1ace98e942d9864b 470 Pfam PF00206 Lyase 18 306 1.5E-60 T 12-10-2018 IPR022761 Fumarate lyase, N-terminal JDM601_1837 e440b53dac37efec1ace98e942d9864b 470 Gene3D G3DSA:1.10.40.30 366 438 2.3E-158 T 12-10-2018 JDM601_1837 e440b53dac37efec1ace98e942d9864b 470 Pfam PF14698 Argininosuccinate lyase C-terminal 369 437 8.9E-22 T 12-10-2018 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 JDM601_1837 e440b53dac37efec1ace98e942d9864b 470 PRINTS PR00145 Argininosuccinate lyase family signature 148 168 1.9E-52 T 12-10-2018 JDM601_1837 e440b53dac37efec1ace98e942d9864b 470 PRINTS PR00145 Argininosuccinate lyase family signature 316 335 1.9E-52 T 12-10-2018 JDM601_1837 e440b53dac37efec1ace98e942d9864b 470 PRINTS PR00145 Argininosuccinate lyase family signature 199 215 1.9E-52 T 12-10-2018 JDM601_1837 e440b53dac37efec1ace98e942d9864b 470 PRINTS PR00145 Argininosuccinate lyase family signature 237 261 1.9E-52 T 12-10-2018 JDM601_1837 e440b53dac37efec1ace98e942d9864b 470 PRINTS PR00145 Argininosuccinate lyase family signature 281 297 1.9E-52 T 12-10-2018 JDM601_1837 e440b53dac37efec1ace98e942d9864b 470 PRINTS PR00145 Argininosuccinate lyase family signature 107 129 1.9E-52 T 12-10-2018 JDM601_2355 c911537e36ba515deb7a448a08a5fa10 589 Gene3D G3DSA:2.40.50.140 1 107 6.3E-32 T 12-10-2018 JDM601_2355 c911537e36ba515deb7a448a08a5fa10 589 SUPERFAMILY SSF55261 288 410 3.27E-32 T 12-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 JDM601_2355 c911537e36ba515deb7a448a08a5fa10 589 SUPERFAMILY SSF50249 3 104 1.67E-27 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold JDM601_2355 c911537e36ba515deb7a448a08a5fa10 589 Gene3D G3DSA:3.30.930.10 138 575 5.4E-177 T 12-10-2018 JDM601_2355 c911537e36ba515deb7a448a08a5fa10 589 Pfam PF00152 tRNA synthetases class II (D, K and N) 117 558 7.1E-98 T 12-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 JDM601_2355 c911537e36ba515deb7a448a08a5fa10 589 Pfam PF02938 GAD domain 311 388 2.5E-12 T 12-10-2018 IPR029351 GAD domain Reactome: R-HSA-379726 JDM601_2355 c911537e36ba515deb7a448a08a5fa10 589 Gene3D G3DSA:3.30.1360.30 271 412 5.4E-177 T 12-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 JDM601_2355 c911537e36ba515deb7a448a08a5fa10 589 SUPERFAMILY SSF55681 117 557 4.98E-98 T 12-10-2018 JDM601_2355 c911537e36ba515deb7a448a08a5fa10 589 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 3 579 1.1E-202 T 12-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 JDM601_2355 c911537e36ba515deb7a448a08a5fa10 589 Hamap MF_00044 Aspartate--tRNA(Asp/Asn) ligase [aspS]. 2 585 31.72 T 12-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 JDM601_2355 c911537e36ba515deb7a448a08a5fa10 589 Pfam PF01336 OB-fold nucleic acid binding domain 19 101 7.7E-16 T 12-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 JDM601_2355 c911537e36ba515deb7a448a08a5fa10 589 PRINTS PR01042 Aspartyl-tRNA synthetase signature 190 202 1.3E-25 T 12-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 JDM601_2355 c911537e36ba515deb7a448a08a5fa10 589 PRINTS PR01042 Aspartyl-tRNA synthetase signature 519 533 1.3E-25 T 12-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 JDM601_2355 c911537e36ba515deb7a448a08a5fa10 589 PRINTS PR01042 Aspartyl-tRNA synthetase signature 207 220 1.3E-25 T 12-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 JDM601_2355 c911537e36ba515deb7a448a08a5fa10 589 PRINTS PR01042 Aspartyl-tRNA synthetase signature 475 491 1.3E-25 T 12-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 JDM601_3664 d941bf106c3890bec770b5a7bdc351fc 137 Gene3D G3DSA:3.10.450.50 4 132 5.5E-42 T 12-10-2018 JDM601_3664 d941bf106c3890bec770b5a7bdc351fc 137 Pfam PF12680 SnoaL-like domain 15 118 9.0E-14 T 12-10-2018 IPR037401 SnoaL-like domain JDM601_3664 d941bf106c3890bec770b5a7bdc351fc 137 SUPERFAMILY SSF54427 13 127 6.54E-21 T 12-10-2018 IPR032710 NTF2-like domain superfamily JDM601_0812 c98e8a2e870c24c17a406fa424a0629e 551 PIRSF PIRSF000362 93 535 1.3E-124 T 12-10-2018 IPR021163 Ferredoxin-NADP+ reductase, adrenodoxin-type GO:0016491|GO:0055114 Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 JDM601_0812 c98e8a2e870c24c17a406fa424a0629e 551 SUPERFAMILY SSF54862 1 72 6.28E-14 T 12-10-2018 JDM601_0812 c98e8a2e870c24c17a406fa424a0629e 551 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 101 265 1.2E-7 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JDM601_0812 c98e8a2e870c24c17a406fa424a0629e 551 Gene3D G3DSA:3.50.50.60 141 406 8.9E-134 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_0812 c98e8a2e870c24c17a406fa424a0629e 551 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 31 42 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site JDM601_0812 c98e8a2e870c24c17a406fa424a0629e 551 Gene3D G3DSA:3.30.70.20 1 85 2.7E-20 T 12-10-2018 JDM601_0812 c98e8a2e870c24c17a406fa424a0629e 551 Gene3D G3DSA:3.40.50.720 101 529 8.9E-134 T 12-10-2018 JDM601_0812 c98e8a2e870c24c17a406fa424a0629e 551 SUPERFAMILY SSF51971 98 401 5.53E-46 T 12-10-2018 JDM601_0812 c98e8a2e870c24c17a406fa424a0629e 551 Pfam PF00037 4Fe-4S binding domain 25 47 4.5E-9 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain JDM601_0812 c98e8a2e870c24c17a406fa424a0629e 551 PRINTS PR00419 Adrenodoxin reductase family signature 124 137 4.4E-18 T 12-10-2018 JDM601_0812 c98e8a2e870c24c17a406fa424a0629e 551 PRINTS PR00419 Adrenodoxin reductase family signature 100 122 4.4E-18 T 12-10-2018 JDM601_0812 c98e8a2e870c24c17a406fa424a0629e 551 PRINTS PR00419 Adrenodoxin reductase family signature 239 253 4.4E-18 T 12-10-2018 JDM601_0812 c98e8a2e870c24c17a406fa424a0629e 551 PRINTS PR00419 Adrenodoxin reductase family signature 167 177 4.4E-18 T 12-10-2018 JDM601_2267 be0915e3773765422a6bfb8ccb1ea22d 696 SUPERFAMILY SSF52922 562 695 3.4E-39 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 JDM601_2267 be0915e3773765422a6bfb8ccb1ea22d 696 Pfam PF02780 Transketolase, C-terminal domain 579 686 1.4E-13 T 12-10-2018 IPR033248 Transketolase, C-terminal domain JDM601_2267 be0915e3773765422a6bfb8ccb1ea22d 696 Gene3D G3DSA:3.40.50.920 569 696 1.7E-41 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 JDM601_2267 be0915e3773765422a6bfb8ccb1ea22d 696 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 23 358 3.2E-144 T 12-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 JDM601_2267 be0915e3773765422a6bfb8ccb1ea22d 696 Pfam PF02779 Transketolase, pyrimidine binding domain 374 555 9.8E-43 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain JDM601_2267 be0915e3773765422a6bfb8ccb1ea22d 696 ProSitePatterns PS00801 Transketolase signature 1. 31 51 - T 12-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 JDM601_2267 be0915e3773765422a6bfb8ccb1ea22d 696 SUPERFAMILY SSF52518 357 557 1.12E-60 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold JDM601_2267 be0915e3773765422a6bfb8ccb1ea22d 696 TIGRFAM TIGR00232 tktlase_bact: transketolase 26 693 3.8E-236 T 12-10-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 JDM601_2267 be0915e3773765422a6bfb8ccb1ea22d 696 Gene3D G3DSA:3.40.50.970 1 354 4.5E-114 T 12-10-2018 JDM601_2267 be0915e3773765422a6bfb8ccb1ea22d 696 Gene3D G3DSA:3.40.50.970 355 568 3.2E-78 T 12-10-2018 JDM601_2267 be0915e3773765422a6bfb8ccb1ea22d 696 ProSitePatterns PS00802 Transketolase signature 2. 497 513 - T 12-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 JDM601_2267 be0915e3773765422a6bfb8ccb1ea22d 696 SMART SM00861 375 557 1.4E-60 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain JDM601_2267 be0915e3773765422a6bfb8ccb1ea22d 696 SUPERFAMILY SSF52518 17 344 1.18E-97 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold JDM601_2764 df46d05bd72ffee553e1958887b78654 361 SUPERFAMILY SSF53254 47 270 1.78E-24 T 12-10-2018 IPR029033 Histidine phosphatase superfamily JDM601_2764 df46d05bd72ffee553e1958887b78654 361 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 51 60 - T 12-10-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824 JDM601_2764 df46d05bd72ffee553e1958887b78654 361 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 51 266 1.7E-17 T 12-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 JDM601_2764 df46d05bd72ffee553e1958887b78654 361 PIRSF PIRSF000709 48 151 3.9E-6 T 12-10-2018 JDM601_2764 df46d05bd72ffee553e1958887b78654 361 Gene3D G3DSA:3.40.50.1240 44 270 1.8E-22 T 12-10-2018 IPR029033 Histidine phosphatase superfamily JDM601_2764 df46d05bd72ffee553e1958887b78654 361 SMART SM00855 48 222 6.9E-13 T 12-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 JDM601_3456 23283fb0d3fec9f914fec336c6e6bf12 581 Gene3D G3DSA:3.90.700.10 334 495 1.5E-144 T 12-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 JDM601_3456 23283fb0d3fec9f914fec336c6e6bf12 581 SUPERFAMILY SSF56425 314 499 1.23E-31 T 12-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 JDM601_3456 23283fb0d3fec9f914fec336c6e6bf12 581 SUPERFAMILY SSF51905 7 565 6.35E-42 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_3456 23283fb0d3fec9f914fec336c6e6bf12 581 Pfam PF00890 FAD binding domain 9 546 4.0E-90 T 12-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 JDM601_3456 23283fb0d3fec9f914fec336c6e6bf12 581 Gene3D G3DSA:3.50.50.60 8 558 1.5E-144 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_0291 6f4f60de2b4ce0b81281218802d5d35d 540 Pfam PF05108 Type VII secretion system ESX-1, transport TM domain B 34 519 1.2E-170 T 12-10-2018 IPR007795 Type VII secretion system EccB JDM601_0291 6f4f60de2b4ce0b81281218802d5d35d 540 Gene3D G3DSA:2.40.50.900 101 173 4.5E-27 T 12-10-2018 JDM601_0291 6f4f60de2b4ce0b81281218802d5d35d 540 Gene3D G3DSA:2.40.50.910 274 359 1.1E-23 T 12-10-2018 JDM601_0291 6f4f60de2b4ce0b81281218802d5d35d 540 TIGRFAM TIGR03919 T7SS_EccB: type VII secretion protein EccB 36 506 1.5E-156 T 12-10-2018 IPR007795 Type VII secretion system EccB JDM601_3251 282660461a74042492384b4c30c7ffbc 622 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 622 40.568 T 12-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 JDM601_3251 282660461a74042492384b4c30c7ffbc 622 Gene3D G3DSA:3.60.20.10 2 245 9.1E-71 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal JDM601_3251 282660461a74042492384b4c30c7ffbc 622 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 622 8.1E-245 T 12-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 JDM601_3251 282660461a74042492384b4c30c7ffbc 622 SUPERFAMILY SSF56235 2 237 8.58E-64 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal JDM601_3251 282660461a74042492384b4c30c7ffbc 622 Gene3D G3DSA:3.40.50.10490 456 607 6.8E-138 T 12-10-2018 JDM601_3251 282660461a74042492384b4c30c7ffbc 622 Pfam PF13522 Glutamine amidotransferase domain 69 200 4.9E-19 T 12-10-2018 JDM601_3251 282660461a74042492384b4c30c7ffbc 622 SUPERFAMILY SSF53697 255 622 8.63E-106 T 12-10-2018 JDM601_3251 282660461a74042492384b4c30c7ffbc 622 Pfam PF01380 SIS domain 299 423 3.6E-34 T 12-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 JDM601_3251 282660461a74042492384b4c30c7ffbc 622 Pfam PF01380 SIS domain 471 599 9.7E-21 T 12-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 JDM601_3251 282660461a74042492384b4c30c7ffbc 622 Gene3D G3DSA:3.40.50.10490 257 621 6.8E-138 T 12-10-2018 JDM601_2653 f1e616e50009cb30d2c6b9fd27b46469 369 Pfam PF00196 Bacterial regulatory proteins, luxR family 305 358 5.0E-10 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JDM601_2653 f1e616e50009cb30d2c6b9fd27b46469 369 SMART SM00421 302 359 3.9E-13 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JDM601_2653 f1e616e50009cb30d2c6b9fd27b46469 369 Gene3D G3DSA:1.10.10.10 170 367 2.4E-14 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JDM601_2653 f1e616e50009cb30d2c6b9fd27b46469 369 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 319 335 1.4E-6 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JDM601_2653 f1e616e50009cb30d2c6b9fd27b46469 369 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 305 319 1.4E-6 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JDM601_2653 f1e616e50009cb30d2c6b9fd27b46469 369 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 335 347 1.4E-6 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JDM601_2653 f1e616e50009cb30d2c6b9fd27b46469 369 SUPERFAMILY SSF46894 294 362 3.03E-15 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 JDM601_0234 2a75072d1ed3e7c25b43ad9d4fe7e9a9 251 Pfam PF13183 4Fe-4S dicluster domain 140 216 5.9E-14 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain JDM601_0234 2a75072d1ed3e7c25b43ad9d4fe7e9a9 251 SUPERFAMILY SSF54292 17 103 4.85E-22 T 12-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 JDM601_0234 2a75072d1ed3e7c25b43ad9d4fe7e9a9 251 Gene3D G3DSA:1.10.1060.10 107 235 2.5E-15 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 JDM601_0234 2a75072d1ed3e7c25b43ad9d4fe7e9a9 251 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 18 223 1.4E-41 T 12-10-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 JDM601_0234 2a75072d1ed3e7c25b43ad9d4fe7e9a9 251 SUPERFAMILY SSF46548 124 228 1.33E-17 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 JDM601_0234 2a75072d1ed3e7c25b43ad9d4fe7e9a9 251 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 53 61 - T 12-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 JDM601_0234 2a75072d1ed3e7c25b43ad9d4fe7e9a9 251 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 7 105 4.1E-25 T 12-10-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 JDM601_0234 2a75072d1ed3e7c25b43ad9d4fe7e9a9 251 Gene3D G3DSA:3.10.20.30 1 103 1.4E-25 T 12-10-2018 IPR012675 Beta-grasp domain superfamily JDM601_0381 51cdebcf3543a86faab1c7f40368c6c6 757 Gene3D G3DSA:1.25.40.10 428 752 1.8E-110 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JDM601_0381 51cdebcf3543a86faab1c7f40368c6c6 757 SMART SM00220 158 400 1.2E-29 T 12-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 JDM601_0381 51cdebcf3543a86faab1c7f40368c6c6 757 Pfam PF00069 Protein kinase domain 160 348 1.9E-31 T 12-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 JDM601_0381 51cdebcf3543a86faab1c7f40368c6c6 757 SUPERFAMILY SSF56112 139 399 1.41E-45 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily JDM601_0381 51cdebcf3543a86faab1c7f40368c6c6 757 Pfam PF16919 Protein kinase G rubredoxin domain 26 157 6.2E-56 T 12-10-2018 IPR031634 Protein kinase G, rubredoxin domain KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1 JDM601_0381 51cdebcf3543a86faab1c7f40368c6c6 757 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 279 291 - T 12-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 JDM601_0381 51cdebcf3543a86faab1c7f40368c6c6 757 Gene3D G3DSA:1.10.510.10 245 400 1.1E-116 T 12-10-2018 JDM601_0381 51cdebcf3543a86faab1c7f40368c6c6 757 SUPERFAMILY SSF48452 543 648 4.25E-7 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JDM601_0381 51cdebcf3543a86faab1c7f40368c6c6 757 Gene3D G3DSA:1.25.40.10 419 601 1.8E-110 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JDM601_0381 51cdebcf3543a86faab1c7f40368c6c6 757 Gene3D G3DSA:3.30.200.20 110 244 1.1E-116 T 12-10-2018 JDM601_0381 51cdebcf3543a86faab1c7f40368c6c6 757 Pfam PF16918 Protein kinase G tetratricopeptide repeat 416 755 7.6E-146 T 12-10-2018 IPR031636 Protein kinase G, tetratricopeptide repeat containing domain KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1 JDM601_2595 0fa03277dbd8ab970edd4f74f4bfc398 206 Gene3D G3DSA:1.10.357.10 7 204 1.3E-30 T 12-10-2018 JDM601_2595 0fa03277dbd8ab970edd4f74f4bfc398 206 Pfam PF00440 Bacterial regulatory proteins, tetR family 24 69 1.7E-9 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_2595 0fa03277dbd8ab970edd4f74f4bfc398 206 SUPERFAMILY SSF46689 16 85 2.29E-15 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JDM601_2595 0fa03277dbd8ab970edd4f74f4bfc398 206 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 44 67 8.8E-5 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_2595 0fa03277dbd8ab970edd4f74f4bfc398 206 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 23 36 8.8E-5 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_2595 0fa03277dbd8ab970edd4f74f4bfc398 206 SUPERFAMILY SSF48498 95 200 1.04E-7 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily JDM601_0700 5a3d8fe494f376f65fa0655b57f6b5c7 377 Gene3D G3DSA:3.50.50.60 98 221 4.6E-97 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_0700 5a3d8fe494f376f65fa0655b57f6b5c7 377 Gene3D G3DSA:3.30.390.30 304 375 2.9E-13 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 JDM601_0700 5a3d8fe494f376f65fa0655b57f6b5c7 377 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 215 229 3.3E-14 T 12-10-2018 JDM601_0700 5a3d8fe494f376f65fa0655b57f6b5c7 377 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 129 154 3.3E-14 T 12-10-2018 JDM601_0700 5a3d8fe494f376f65fa0655b57f6b5c7 377 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 88 97 3.3E-14 T 12-10-2018 JDM601_0700 5a3d8fe494f376f65fa0655b57f6b5c7 377 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 254 261 3.3E-14 T 12-10-2018 JDM601_0700 5a3d8fe494f376f65fa0655b57f6b5c7 377 SUPERFAMILY SSF51905 4 266 1.73E-34 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_0700 5a3d8fe494f376f65fa0655b57f6b5c7 377 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 2 278 4.0E-48 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JDM601_0700 5a3d8fe494f376f65fa0655b57f6b5c7 377 Pfam PF14759 Reductase C-terminal 304 372 1.1E-13 T 12-10-2018 IPR028202 Reductase, C-terminal JDM601_0700 5a3d8fe494f376f65fa0655b57f6b5c7 377 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 85 103 1.2E-16 T 12-10-2018 JDM601_0700 5a3d8fe494f376f65fa0655b57f6b5c7 377 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 129 147 1.2E-16 T 12-10-2018 JDM601_0700 5a3d8fe494f376f65fa0655b57f6b5c7 377 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 214 230 1.2E-16 T 12-10-2018 JDM601_0700 5a3d8fe494f376f65fa0655b57f6b5c7 377 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 239 261 1.2E-16 T 12-10-2018 JDM601_0700 5a3d8fe494f376f65fa0655b57f6b5c7 377 Gene3D G3DSA:3.50.50.60 2 290 4.6E-97 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_0700 5a3d8fe494f376f65fa0655b57f6b5c7 377 SUPERFAMILY SSF55424 300 371 2.38E-17 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 JDM601_0027 75be9886519aff024e1e7b20c22d60c2 677 Gene3D G3DSA:3.30.230.10 279 435 5.4E-11 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup JDM601_0027 75be9886519aff024e1e7b20c22d60c2 677 Gene3D G3DSA:3.30.565.10 1 228 3.9E-34 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JDM601_0027 75be9886519aff024e1e7b20c22d60c2 677 Gene3D G3DSA:3.40.50.670 438 676 2.0E-58 T 12-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 JDM601_0027 75be9886519aff024e1e7b20c22d60c2 677 PRINTS PR00418 DNA topoisomerase II family signature 111 125 1.5E-35 T 12-10-2018 JDM601_0027 75be9886519aff024e1e7b20c22d60c2 677 PRINTS PR00418 DNA topoisomerase II family signature 608 624 1.5E-35 T 12-10-2018 JDM601_0027 75be9886519aff024e1e7b20c22d60c2 677 PRINTS PR00418 DNA topoisomerase II family signature 544 561 1.5E-35 T 12-10-2018 JDM601_0027 75be9886519aff024e1e7b20c22d60c2 677 PRINTS PR00418 DNA topoisomerase II family signature 564 576 1.5E-35 T 12-10-2018 JDM601_0027 75be9886519aff024e1e7b20c22d60c2 677 PRINTS PR00418 DNA topoisomerase II family signature 460 474 1.5E-35 T 12-10-2018 JDM601_0027 75be9886519aff024e1e7b20c22d60c2 677 PRINTS PR00418 DNA topoisomerase II family signature 66 79 1.5E-35 T 12-10-2018 JDM601_0027 75be9886519aff024e1e7b20c22d60c2 677 PRINTS PR00418 DNA topoisomerase II family signature 299 312 1.5E-35 T 12-10-2018 JDM601_0027 75be9886519aff024e1e7b20c22d60c2 677 PRINTS PR00418 DNA topoisomerase II family signature 526 542 1.5E-35 T 12-10-2018 JDM601_0027 75be9886519aff024e1e7b20c22d60c2 677 PRINTS PR00418 DNA topoisomerase II family signature 29 44 1.5E-35 T 12-10-2018 JDM601_0027 75be9886519aff024e1e7b20c22d60c2 677 Pfam PF01751 Toprim domain 459 568 1.9E-10 T 12-10-2018 IPR006171 TOPRIM domain JDM601_0027 75be9886519aff024e1e7b20c22d60c2 677 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 603 662 1.1E-14 T 12-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 JDM601_0027 75be9886519aff024e1e7b20c22d60c2 677 Pfam PF00204 DNA gyrase B 293 421 9.6E-11 T 12-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 JDM601_0027 75be9886519aff024e1e7b20c22d60c2 677 SUPERFAMILY SSF56719 451 667 1.2E-50 T 12-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 JDM601_0027 75be9886519aff024e1e7b20c22d60c2 677 SMART SM00433 36 667 7.5E-30 T 12-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 JDM601_0027 75be9886519aff024e1e7b20c22d60c2 677 ProSitePatterns PS00177 DNA topoisomerase II signature. 462 470 - T 12-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 JDM601_0027 75be9886519aff024e1e7b20c22d60c2 677 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 31 187 2.1E-8 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JDM601_0027 75be9886519aff024e1e7b20c22d60c2 677 SUPERFAMILY SSF54211 295 416 2.28E-9 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold JDM601_0027 75be9886519aff024e1e7b20c22d60c2 677 SUPERFAMILY SSF55874 3 229 3.71E-27 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JDM601_2661 cd4715a33f044d95ceab27d5ac6745da 661 TIGRFAM TIGR00724 urea_amlyse_rel: biotin-dependent carboxylase uncharacterized domain 4 306 1.7E-73 T 12-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B JDM601_2661 cd4715a33f044d95ceab27d5ac6745da 661 Pfam PF02682 Carboxyltransferase domain, subdomain C and D 348 567 1.7E-46 T 12-10-2018 IPR003833 Carboxyltransferase domain, subdomain C and D JDM601_2661 cd4715a33f044d95ceab27d5ac6745da 661 SUPERFAMILY SSF160467 349 440 3.79E-15 T 12-10-2018 JDM601_2661 cd4715a33f044d95ceab27d5ac6745da 661 SMART SM00796 347 581 1.5E-98 T 12-10-2018 IPR003833 Carboxyltransferase domain, subdomain C and D JDM601_2661 cd4715a33f044d95ceab27d5ac6745da 661 Gene3D G3DSA:3.30.1360.40 332 424 2.2E-21 T 12-10-2018 JDM601_2661 cd4715a33f044d95ceab27d5ac6745da 661 Gene3D G3DSA:2.40.100.10 430 653 8.7E-92 T 12-10-2018 IPR029000 Cyclophilin-like domain superfamily JDM601_2661 cd4715a33f044d95ceab27d5ac6745da 661 Gene3D G3DSA:2.40.100.10 180 313 3.2E-49 T 12-10-2018 IPR029000 Cyclophilin-like domain superfamily JDM601_2661 cd4715a33f044d95ceab27d5ac6745da 661 Pfam PF02626 Carboxyltransferase domain, subdomain A and B 27 300 7.0E-79 T 12-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B JDM601_2661 cd4715a33f044d95ceab27d5ac6745da 661 SUPERFAMILY SSF50891 181 305 2.88E-27 T 12-10-2018 IPR029000 Cyclophilin-like domain superfamily JDM601_2661 cd4715a33f044d95ceab27d5ac6745da 661 SUPERFAMILY SSF50891 464 597 1.52E-24 T 12-10-2018 IPR029000 Cyclophilin-like domain superfamily JDM601_2661 cd4715a33f044d95ceab27d5ac6745da 661 SMART SM00797 26 320 5.2E-133 T 12-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B JDM601_1431 088102dfa877a92e106fb2733dd8ead5 558 SMART SM00382 30 233 7.4E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain JDM601_1431 088102dfa877a92e106fb2733dd8ead5 558 SMART SM00382 346 516 7.7E-6 T 12-10-2018 IPR003593 AAA+ ATPase domain JDM601_1431 088102dfa877a92e106fb2733dd8ead5 558 Pfam PF00005 ABC transporter 338 471 1.3E-20 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JDM601_1431 088102dfa877a92e106fb2733dd8ead5 558 TIGRFAM TIGR03719 ABC_ABC_ChvD: ATP-binding cassette protein, ChvD family 3 555 1.6E-268 T 12-10-2018 IPR022374 Energy-dependent translational throttle protein EttA GO:0045900 JDM601_1431 088102dfa877a92e106fb2733dd8ead5 558 SUPERFAMILY SSF52540 8 241 1.22E-48 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_1431 088102dfa877a92e106fb2733dd8ead5 558 ProSitePatterns PS00211 ABC transporters family signature. 443 457 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JDM601_1431 088102dfa877a92e106fb2733dd8ead5 558 Pfam PF12848 ABC transporter 227 303 2.7E-12 T 12-10-2018 IPR032781 ABC-transporter extension domain JDM601_1431 088102dfa877a92e106fb2733dd8ead5 558 Pfam PF00005 ABC transporter 21 188 1.2E-26 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JDM601_1431 088102dfa877a92e106fb2733dd8ead5 558 SUPERFAMILY SSF52540 309 507 1.93E-44 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_1431 088102dfa877a92e106fb2733dd8ead5 558 ProSitePatterns PS00211 ABC transporters family signature. 160 174 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JDM601_1431 088102dfa877a92e106fb2733dd8ead5 558 Gene3D G3DSA:3.40.50.300 283 557 1.0E-63 T 12-10-2018 JDM601_1431 088102dfa877a92e106fb2733dd8ead5 558 Gene3D G3DSA:3.40.50.300 2 282 4.3E-76 T 12-10-2018 JDM601_1614 678cdefb06ccf9332e2e558af6fe9eb5 210 SUPERFAMILY SSF46689 12 80 8.72E-11 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JDM601_1614 678cdefb06ccf9332e2e558af6fe9eb5 210 Gene3D G3DSA:1.10.357.10 1 208 1.1E-16 T 12-10-2018 JDM601_2856 cc1cb91901206696c990de05848c9197 413 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 256 406 2.7E-42 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 JDM601_2856 cc1cb91901206696c990de05848c9197 413 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 149 243 3.7E-19 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 JDM601_2856 cc1cb91901206696c990de05848c9197 413 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 11 145 6.8E-11 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 JDM601_2856 cc1cb91901206696c990de05848c9197 413 Gene3D G3DSA:1.20.140.10 261 409 4.1E-40 T 12-10-2018 JDM601_2856 cc1cb91901206696c990de05848c9197 413 SUPERFAMILY SSF47203 254 410 6.12E-42 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 JDM601_2856 cc1cb91901206696c990de05848c9197 413 Gene3D G3DSA:1.10.540.10 1 146 3.8E-26 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 JDM601_2856 cc1cb91901206696c990de05848c9197 413 SUPERFAMILY SSF56645 32 267 1.26E-59 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 JDM601_2856 cc1cb91901206696c990de05848c9197 413 Gene3D G3DSA:2.40.110.10 148 260 7.4E-32 T 12-10-2018 JDM601_2863 5eb09fc04f57db188008a0dbb3476a51 277 ProSitePatterns PS01099 Respiratory-chain NADH dehydrogenase 24 Kd subunit signature. 168 186 - T 12-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 JDM601_2863 5eb09fc04f57db188008a0dbb3476a51 277 PIRSF PIRSF000216 41 267 1.3E-71 T 12-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 JDM601_2863 5eb09fc04f57db188008a0dbb3476a51 277 SUPERFAMILY SSF52833 63 217 9.73E-47 T 12-10-2018 IPR036249 Thioredoxin-like superfamily JDM601_2863 5eb09fc04f57db188008a0dbb3476a51 277 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 68 210 7.2E-48 T 12-10-2018 JDM601_2863 5eb09fc04f57db188008a0dbb3476a51 277 TIGRFAM TIGR01958 nuoE_fam: NADH-quinone oxidoreductase, E subunit 68 210 1.2E-42 T 12-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 JDM601_2863 5eb09fc04f57db188008a0dbb3476a51 277 Gene3D G3DSA:1.10.10.1590 56 128 3.5E-21 T 12-10-2018 JDM601_2863 5eb09fc04f57db188008a0dbb3476a51 277 Gene3D G3DSA:3.40.30.10 129 224 5.2E-25 T 12-10-2018 JDM601_1212 3d961ef36f22020f2d71084026ef7312 329 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 157 323 1.2E-31 T 12-10-2018 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 JDM601_1212 3d961ef36f22020f2d71084026ef7312 329 SUPERFAMILY SSF51735 3 155 4.02E-42 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_1212 3d961ef36f22020f2d71084026ef7312 329 Hamap MF_01517 Malate dehydrogenase [mdh]. 2 327 57.062 T 12-10-2018 IPR010945 Malate dehydrogenase, type 2 GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 JDM601_1212 3d961ef36f22020f2d71084026ef7312 329 PIRSF PIRSF000102 2 326 8.5E-55 T 12-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 JDM601_1212 3d961ef36f22020f2d71084026ef7312 329 SUPERFAMILY SSF56327 157 325 4.63E-59 T 12-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 JDM601_1212 3d961ef36f22020f2d71084026ef7312 329 TIGRFAM TIGR01759 MalateDH-SF1: malate dehydrogenase 4 323 1.0E-143 T 12-10-2018 IPR010945 Malate dehydrogenase, type 2 GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 JDM601_1212 3d961ef36f22020f2d71084026ef7312 329 ProSitePatterns PS00068 Malate dehydrogenase active site signature. 156 168 - T 12-10-2018 IPR001252 Malate dehydrogenase, active site GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383|Reactome: R-HSA-70263 JDM601_1212 3d961ef36f22020f2d71084026ef7312 329 Gene3D G3DSA:3.90.110.10 156 329 1.5E-63 T 12-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 JDM601_1212 3d961ef36f22020f2d71084026ef7312 329 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 7 151 2.6E-31 T 12-10-2018 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 JDM601_1212 3d961ef36f22020f2d71084026ef7312 329 Gene3D G3DSA:3.40.50.720 1 155 4.0E-53 T 12-10-2018 JDM601_2797 20c154034e4d67f740b8fe5011890aea 721 Gene3D G3DSA:1.10.540.10 3 118 5.2E-29 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 JDM601_2797 20c154034e4d67f740b8fe5011890aea 721 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 461 555 4.9E-18 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 JDM601_2797 20c154034e4d67f740b8fe5011890aea 721 SUPERFAMILY SSF47203 205 335 1.48E-29 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 JDM601_2797 20c154034e4d67f740b8fe5011890aea 721 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 567 712 1.4E-15 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 JDM601_2797 20c154034e4d67f740b8fe5011890aea 721 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 205 333 1.7E-21 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 JDM601_2797 20c154034e4d67f740b8fe5011890aea 721 Gene3D G3DSA:1.10.540.10 351 455 1.3E-7 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 JDM601_2797 20c154034e4d67f740b8fe5011890aea 721 SUPERFAMILY SSF47203 567 713 3.87E-12 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 JDM601_2797 20c154034e4d67f740b8fe5011890aea 721 SUPERFAMILY SSF56645 374 580 1.7E-54 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 JDM601_2797 20c154034e4d67f740b8fe5011890aea 721 Gene3D G3DSA:1.20.140.10 204 347 6.1E-28 T 12-10-2018 JDM601_2797 20c154034e4d67f740b8fe5011890aea 721 Gene3D G3DSA:1.20.140.10 572 718 7.9E-21 T 12-10-2018 JDM601_2797 20c154034e4d67f740b8fe5011890aea 721 SUPERFAMILY SSF56645 1 201 3.93E-27 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 JDM601_2797 20c154034e4d67f740b8fe5011890aea 721 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 116 3.6E-20 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 JDM601_2797 20c154034e4d67f740b8fe5011890aea 721 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 380 457 2.0E-5 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 JDM601_2797 20c154034e4d67f740b8fe5011890aea 721 Gene3D G3DSA:2.40.110.10 461 571 1.8E-33 T 12-10-2018 JDM601_3816 748af0efe2d7b042fa0106599db48fed 286 Gene3D G3DSA:3.40.50.720 1 280 2.3E-76 T 12-10-2018 JDM601_3816 748af0efe2d7b042fa0106599db48fed 286 SUPERFAMILY SSF51735 2 280 5.19E-57 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_3816 748af0efe2d7b042fa0106599db48fed 286 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 3.9E-22 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3816 748af0efe2d7b042fa0106599db48fed 286 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 94 105 3.9E-22 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3816 748af0efe2d7b042fa0106599db48fed 286 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 137 153 3.9E-22 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3816 748af0efe2d7b042fa0106599db48fed 286 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 191 3.9E-22 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3816 748af0efe2d7b042fa0106599db48fed 286 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 241 261 3.9E-22 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3816 748af0efe2d7b042fa0106599db48fed 286 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 193 210 3.9E-22 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3816 748af0efe2d7b042fa0106599db48fed 286 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 278 5.1E-37 T 12-10-2018 JDM601_3816 748af0efe2d7b042fa0106599db48fed 286 TIGRFAM TIGR03971 SDR_subfam_1: SDR family mycofactocin-dependent oxidoreductase 4 279 5.1E-110 T 12-10-2018 IPR023985 Mycofactocin-dependent oxidoreductase JDM601_3212 8218e155fc48694d452d6f70657c63c4 289 Gene3D G3DSA:3.10.129.10 3 156 1.6E-46 T 12-10-2018 JDM601_3212 8218e155fc48694d452d6f70657c63c4 289 SUPERFAMILY SSF54637 7 156 2.99E-35 T 12-10-2018 IPR029069 HotDog domain superfamily JDM601_3212 8218e155fc48694d452d6f70657c63c4 289 SUPERFAMILY SSF54637 159 272 3.13E-29 T 12-10-2018 IPR029069 HotDog domain superfamily JDM601_3212 8218e155fc48694d452d6f70657c63c4 289 Gene3D G3DSA:3.10.129.10 157 289 7.2E-46 T 12-10-2018 JDM601_3212 8218e155fc48694d452d6f70657c63c4 289 Pfam PF13452 N-terminal half of MaoC dehydratase 7 125 5.8E-7 T 12-10-2018 IPR039569 N-terminal of MaoC-like dehydratase Reactome: R-HSA-193368|Reactome: R-HSA-2046106|Reactome: R-HSA-389887|Reactome: R-HSA-390247|Reactome: R-HSA-9033241|Reactome: R-HSA-9033500 JDM601_3212 8218e155fc48694d452d6f70657c63c4 289 Pfam PF01575 MaoC like domain 159 265 1.7E-29 T 12-10-2018 IPR002539 MaoC-like dehydratase domain JDM601_0683 f508686592f1ae97208f2adce0bb7e31 1316 Pfam PF04997 RNA polymerase Rpb1, domain 1 7 417 2.3E-82 T 12-10-2018 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JDM601_0683 f508686592f1ae97208f2adce0bb7e31 1316 Pfam PF00623 RNA polymerase Rpb1, domain 2 419 560 6.3E-36 T 12-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JDM601_0683 f508686592f1ae97208f2adce0bb7e31 1316 SUPERFAMILY SSF64484 5 1268 0.0 T 12-10-2018 JDM601_0683 f508686592f1ae97208f2adce0bb7e31 1316 Pfam PF05000 RNA polymerase Rpb1, domain 4 754 828 8.3E-8 T 12-10-2018 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JDM601_0683 f508686592f1ae97208f2adce0bb7e31 1316 SMART SM00663 310 589 1.5E-171 T 12-10-2018 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JDM601_0683 f508686592f1ae97208f2adce0bb7e31 1316 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 4 1278 17.38 T 12-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JDM601_0683 f508686592f1ae97208f2adce0bb7e31 1316 Gene3D G3DSA:1.10.40.90 449 491 2.2E-23 T 12-10-2018 JDM601_0683 f508686592f1ae97208f2adce0bb7e31 1316 Gene3D G3DSA:2.40.50.100 1041 1116 1.5E-67 T 12-10-2018 JDM601_0683 f508686592f1ae97208f2adce0bb7e31 1316 Gene3D G3DSA:1.10.1790.20 1025 1215 1.5E-67 T 12-10-2018 JDM601_0683 f508686592f1ae97208f2adce0bb7e31 1316 Pfam PF04998 RNA polymerase Rpb1, domain 5 843 1216 2.7E-64 T 12-10-2018 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JDM601_0683 f508686592f1ae97208f2adce0bb7e31 1316 Gene3D G3DSA:1.10.132.30 733 867 2.6E-47 T 12-10-2018 IPR038120 RNA polymerase Rpb1, funnel domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JDM601_0683 f508686592f1ae97208f2adce0bb7e31 1316 Gene3D G3DSA:1.10.274.100 565 732 1.0E-35 T 12-10-2018 JDM601_0683 f508686592f1ae97208f2adce0bb7e31 1316 Gene3D G3DSA:1.10.150.390 1217 1280 3.8E-28 T 12-10-2018 JDM601_0683 f508686592f1ae97208f2adce0bb7e31 1316 Pfam PF04983 RNA polymerase Rpb1, domain 3 564 736 8.3E-26 T 12-10-2018 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JDM601_0683 f508686592f1ae97208f2adce0bb7e31 1316 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 10 1268 0.0 T 12-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JDM601_2329 6a626c7fb95e3e11abf9a5ef66b45d67 187 Hamap MF_00141 Elongation factor P [efp]. 1 185 49.109 T 12-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 JDM601_2329 6a626c7fb95e3e11abf9a5ef66b45d67 187 SMART SM01185 67 121 6.2E-26 T 12-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 JDM601_2329 6a626c7fb95e3e11abf9a5ef66b45d67 187 Gene3D G3DSA:2.30.30.30 1 62 2.3E-27 T 12-10-2018 IPR014722 Ribosomal protein L2, domain 2 JDM601_2329 6a626c7fb95e3e11abf9a5ef66b45d67 187 Gene3D G3DSA:2.40.50.140 128 187 4.1E-26 T 12-10-2018 JDM601_2329 6a626c7fb95e3e11abf9a5ef66b45d67 187 TIGRFAM TIGR00038 efp: translation elongation factor P 3 185 1.7E-74 T 12-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 JDM601_2329 6a626c7fb95e3e11abf9a5ef66b45d67 187 Pfam PF01132 Elongation factor P (EF-P) OB domain 68 121 1.4E-20 T 12-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 JDM601_2329 6a626c7fb95e3e11abf9a5ef66b45d67 187 SUPERFAMILY SSF50104 3 63 5.24E-20 T 12-10-2018 IPR008991 Translation protein SH3-like domain superfamily JDM601_2329 6a626c7fb95e3e11abf9a5ef66b45d67 187 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 3 60 4.5E-26 T 12-10-2018 IPR013185 Translation elongation factor, KOW-like JDM601_2329 6a626c7fb95e3e11abf9a5ef66b45d67 187 SUPERFAMILY SSF50249 65 126 2.98E-16 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold JDM601_2329 6a626c7fb95e3e11abf9a5ef66b45d67 187 Pfam PF09285 Elongation factor P, C-terminal 129 184 1.9E-26 T 12-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 JDM601_2329 6a626c7fb95e3e11abf9a5ef66b45d67 187 SUPERFAMILY SSF50249 129 185 8.05E-18 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold JDM601_2329 6a626c7fb95e3e11abf9a5ef66b45d67 187 Gene3D G3DSA:2.40.50.140 64 126 2.0E-21 T 12-10-2018 JDM601_2329 6a626c7fb95e3e11abf9a5ef66b45d67 187 PIRSF PIRSF005901 1 186 2.1E-66 T 12-10-2018 IPR020599 Translation elongation factor P/YeiP JDM601_2329 6a626c7fb95e3e11abf9a5ef66b45d67 187 ProSitePatterns PS01275 Elongation factor P signature. 150 169 - T 12-10-2018 IPR013852 Translation elongation factor P/YeiP, conserved site JDM601_2329 6a626c7fb95e3e11abf9a5ef66b45d67 187 SMART SM00841 129 184 7.3E-34 T 12-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 JDM601_3285 38159869be1e2bdac4ca5853b6278e9e 73 Gene3D G3DSA:2.40.50.140 1 73 3.7E-38 T 12-10-2018 JDM601_3285 38159869be1e2bdac4ca5853b6278e9e 73 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 4 72 6.9E-38 T 12-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 JDM601_3285 38159869be1e2bdac4ca5853b6278e9e 73 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 2 73 26.479 T 12-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 JDM601_3285 38159869be1e2bdac4ca5853b6278e9e 73 Pfam PF01176 Translation initiation factor 1A / IF-1 8 71 1.2E-28 T 12-10-2018 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 JDM601_3285 38159869be1e2bdac4ca5853b6278e9e 73 SUPERFAMILY SSF50249 4 72 1.47E-26 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold JDM601_3737 e5d1dca170b8abd5e58c1a9b5e449308 208 SUPERFAMILY SSF53254 10 202 6.42E-30 T 12-10-2018 IPR029033 Histidine phosphatase superfamily JDM601_3737 e5d1dca170b8abd5e58c1a9b5e449308 208 Gene3D G3DSA:3.40.50.1240 8 206 9.7E-31 T 12-10-2018 IPR029033 Histidine phosphatase superfamily JDM601_3737 e5d1dca170b8abd5e58c1a9b5e449308 208 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 11 195 1.7E-31 T 12-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 JDM601_3737 e5d1dca170b8abd5e58c1a9b5e449308 208 SMART SM00855 9 158 6.8E-13 T 12-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 JDM601_0017 38d4bc9992d435e87abb78a7ed1d35a8 495 Gene3D G3DSA:3.90.1310.10 57 387 3.8E-145 T 12-10-2018 JDM601_0017 38d4bc9992d435e87abb78a7ed1d35a8 495 SUPERFAMILY SSF56601 140 493 3.76E-74 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like JDM601_0017 38d4bc9992d435e87abb78a7ed1d35a8 495 Pfam PF00905 Penicillin binding protein transpeptidase domain 160 488 3.1E-70 T 12-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 JDM601_0017 38d4bc9992d435e87abb78a7ed1d35a8 495 Gene3D G3DSA:3.40.710.10 137 487 3.8E-145 T 12-10-2018 JDM601_1199 ceba386dd06dd3188dbe0135e97fe8dc 384 Pfam PF01883 Iron-sulfur cluster assembly protein 13 85 4.8E-18 T 12-10-2018 IPR002744 MIP18 family-like JDM601_1199 ceba386dd06dd3188dbe0135e97fe8dc 384 ProSitePatterns PS01215 Mrp family signature. 223 239 - T 12-10-2018 IPR000808 Mrp, conserved site GO:0005524 JDM601_1199 ceba386dd06dd3188dbe0135e97fe8dc 384 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 119 363 1.2E-85 T 12-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 JDM601_1199 ceba386dd06dd3188dbe0135e97fe8dc 384 Hamap MF_02040 Iron-sulfur cluster carrier protein. 110 364 33.682 T 12-10-2018 IPR019591 Mrp/NBP35 ATP-binding protein JDM601_1199 ceba386dd06dd3188dbe0135e97fe8dc 384 Gene3D G3DSA:3.40.50.300 114 371 3.3E-67 T 12-10-2018 JDM601_1199 ceba386dd06dd3188dbe0135e97fe8dc 384 SUPERFAMILY SSF117916 12 102 4.9E-21 T 12-10-2018 IPR034904 Fe-S cluster assembly domain superfamily JDM601_1199 ceba386dd06dd3188dbe0135e97fe8dc 384 Gene3D G3DSA:3.30.300.130 5 103 2.1E-20 T 12-10-2018 IPR034904 Fe-S cluster assembly domain superfamily JDM601_1199 ceba386dd06dd3188dbe0135e97fe8dc 384 SUPERFAMILY SSF52540 119 366 5.65E-49 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_3954 0eff96991449a9d61d7cf650ad7036c5 224 SUPERFAMILY SSF46785 145 223 2.04E-19 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JDM601_3954 0eff96991449a9d61d7cf650ad7036c5 224 Gene3D G3DSA:2.60.120.10 1 146 3.1E-47 T 12-10-2018 IPR014710 RmlC-like jelly roll fold JDM601_3954 0eff96991449a9d61d7cf650ad7036c5 224 SMART SM00419 167 215 1.2E-13 T 12-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 JDM601_3954 0eff96991449a9d61d7cf650ad7036c5 224 Gene3D G3DSA:1.10.10.10 147 224 6.4E-35 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JDM601_3954 0eff96991449a9d61d7cf650ad7036c5 224 Pfam PF13545 Crp-like helix-turn-helix domain 148 221 1.3E-17 T 12-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 JDM601_3954 0eff96991449a9d61d7cf650ad7036c5 224 SUPERFAMILY SSF51206 4 142 5.76E-37 T 12-10-2018 IPR018490 Cyclic nucleotide-binding-like JDM601_3954 0eff96991449a9d61d7cf650ad7036c5 224 Pfam PF00027 Cyclic nucleotide-binding domain 29 114 7.5E-24 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain JDM601_3954 0eff96991449a9d61d7cf650ad7036c5 224 SMART SM00100 10 128 7.4E-28 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain JDM601_1911 397a38ae93ca27c0d6dcf1122d1e0ecc 190 Gene3D G3DSA:2.90.10.20 5 73 4.9E-29 T 12-10-2018 JDM601_1911 397a38ae93ca27c0d6dcf1122d1e0ecc 190 SMART SM00257 143 190 6.9E-12 T 12-10-2018 IPR018392 LysM domain JDM601_1911 397a38ae93ca27c0d6dcf1122d1e0ecc 190 Gene3D G3DSA:2.90.10.20 74 114 5.5E-9 T 12-10-2018 JDM601_1911 397a38ae93ca27c0d6dcf1122d1e0ecc 190 SUPERFAMILY SSF54106 143 190 6.28E-8 T 12-10-2018 JDM601_1911 397a38ae93ca27c0d6dcf1122d1e0ecc 190 Pfam PF01476 LysM domain 144 190 1.3E-13 T 12-10-2018 IPR018392 LysM domain JDM601_1911 397a38ae93ca27c0d6dcf1122d1e0ecc 190 Pfam PF01453 D-mannose binding lectin 20 85 1.9E-13 T 12-10-2018 IPR001480 Bulb-type lectin domain JDM601_1911 397a38ae93ca27c0d6dcf1122d1e0ecc 190 Gene3D G3DSA:3.10.350.10 138 190 6.2E-16 T 12-10-2018 IPR036779 LysM domain superfamily JDM601_1911 397a38ae93ca27c0d6dcf1122d1e0ecc 190 SUPERFAMILY SSF51110 6 112 7.2E-24 T 12-10-2018 IPR036426 Bulb-type lectin domain superfamily JDM601_1911 397a38ae93ca27c0d6dcf1122d1e0ecc 190 SMART SM00108 6 114 4.1E-19 T 12-10-2018 IPR001480 Bulb-type lectin domain JDM601_2103 b847be05db9983ae37e9d6c4a4a149af 533 SUPERFAMILY SSF51556 63 465 1.04E-32 T 12-10-2018 IPR032466 Metal-dependent hydrolase JDM601_2103 b847be05db9983ae37e9d6c4a4a149af 533 Gene3D G3DSA:3.20.20.140 64 469 2.9E-84 T 12-10-2018 JDM601_2103 b847be05db9983ae37e9d6c4a4a149af 533 Gene3D G3DSA:3.10.310.70 82 187 2.9E-84 T 12-10-2018 JDM601_2103 b847be05db9983ae37e9d6c4a4a149af 533 SUPERFAMILY SSF51338 12 78 2.52E-12 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 JDM601_2103 b847be05db9983ae37e9d6c4a4a149af 533 Pfam PF07969 Amidohydrolase family 53 531 6.1E-88 T 12-10-2018 IPR013108 Amidohydrolase 3 JDM601_2103 b847be05db9983ae37e9d6c4a4a149af 533 Gene3D G3DSA:2.30.40.10 20 482 2.9E-84 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 JDM601_2374 01e952dfc2326a7de7f1bb55a379a95b 692 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 395 631 9.9E-73 T 12-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial JDM601_2374 01e952dfc2326a7de7f1bb55a379a95b 692 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 2 652 39.467 T 12-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 JDM601_2374 01e952dfc2326a7de7f1bb55a379a95b 692 Pfam PF07549 SecD/SecF GG Motif 39 57 5.4E-4 T 12-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site JDM601_2374 01e952dfc2326a7de7f1bb55a379a95b 692 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 40 639 3.2E-138 T 12-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 JDM601_2374 01e952dfc2326a7de7f1bb55a379a95b 692 Gene3D G3DSA:3.30.70.3400 40 123 2.4E-14 T 12-10-2018 JDM601_2374 01e952dfc2326a7de7f1bb55a379a95b 692 Gene3D G3DSA:3.30.1360.200 322 464 4.7E-29 T 12-10-2018 JDM601_2374 01e952dfc2326a7de7f1bb55a379a95b 692 Gene3D G3DSA:1.20.1640.10 490 643 1.7E-6 T 12-10-2018 JDM601_2374 01e952dfc2326a7de7f1bb55a379a95b 692 Pfam PF02355 Protein export membrane protein 467 640 2.4E-9 T 12-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial JDM601_2374 01e952dfc2326a7de7f1bb55a379a95b 692 SUPERFAMILY SSF82866 448 641 4.05E-24 T 12-10-2018 JDM601_1329 d3d22705263e8441a2c9edce9a2d59a7 681 SMART SM00642 212 547 5.9E-4 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 JDM601_1329 d3d22705263e8441a2c9edce9a2d59a7 681 SUPERFAMILY SSF51011 579 660 3.72E-5 T 12-10-2018 JDM601_1329 d3d22705263e8441a2c9edce9a2d59a7 681 Gene3D G3DSA:1.20.58.280 108 188 3.0E-55 T 12-10-2018 JDM601_1329 d3d22705263e8441a2c9edce9a2d59a7 681 Hamap MF_02124 Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase [glgE]. 1 668 44.667 T 12-10-2018 IPR026585 Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase GO:0016757 KEGG: 00500+2.4.99.16|MetaCyc: PWY-7900 JDM601_1329 d3d22705263e8441a2c9edce9a2d59a7 681 Gene3D G3DSA:2.60.40.10 4 199 3.0E-55 T 12-10-2018 IPR013783 Immunoglobulin-like fold JDM601_1329 d3d22705263e8441a2c9edce9a2d59a7 681 Gene3D G3DSA:2.60.40.1180 578 681 3.0E-38 T 12-10-2018 IPR013780 Glycosyl hydrolase, all-beta JDM601_1329 d3d22705263e8441a2c9edce9a2d59a7 681 Pfam PF00128 Alpha amylase, catalytic domain 246 343 1.8E-4 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 JDM601_1329 d3d22705263e8441a2c9edce9a2d59a7 681 Gene3D G3DSA:3.20.20.80 207 577 2.1E-171 T 12-10-2018 JDM601_1329 d3d22705263e8441a2c9edce9a2d59a7 681 SUPERFAMILY SSF51445 202 572 1.22E-83 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily JDM601_1329 d3d22705263e8441a2c9edce9a2d59a7 681 Pfam PF11896 Domain of unknown function (DUF3416) 3 206 4.0E-56 T 12-10-2018 IPR021828 Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase, domain N/S GO:0004553 KEGG: 00500+2.4.99.16|MetaCyc: PWY-7900 JDM601_3116 91707e332ccd942e3160fe04de7acfd9 253 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 121 183 1.0E-8 T 12-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 JDM601_3116 91707e332ccd942e3160fe04de7acfd9 253 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 91 8.8E-11 T 12-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 JDM601_3116 91707e332ccd942e3160fe04de7acfd9 253 SUPERFAMILY SSF57716 213 252 1.77E-10 T 12-10-2018 JDM601_3116 91707e332ccd942e3160fe04de7acfd9 253 Pfam PF06827 Zinc finger found in FPG and IleRS 225 252 7.2E-6 T 12-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 JDM601_3116 91707e332ccd942e3160fe04de7acfd9 253 Gene3D G3DSA:3.20.190.10 2 121 7.2E-22 T 12-10-2018 IPR035937 MutM-like, N-terminal JDM601_3116 91707e332ccd942e3160fe04de7acfd9 253 SMART SM00898 2 107 1.8E-15 T 12-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 JDM601_3116 91707e332ccd942e3160fe04de7acfd9 253 SUPERFAMILY SSF46946 120 185 1.47E-17 T 12-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 JDM601_3116 91707e332ccd942e3160fe04de7acfd9 253 SMART SM01232 121 209 4.4E-20 T 12-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 JDM601_3116 91707e332ccd942e3160fe04de7acfd9 253 Gene3D G3DSA:1.10.8.50 122 253 1.0E-31 T 12-10-2018 JDM601_3116 91707e332ccd942e3160fe04de7acfd9 253 SUPERFAMILY SSF81624 2 122 3.53E-24 T 12-10-2018 IPR035937 MutM-like, N-terminal JDM601_3116 91707e332ccd942e3160fe04de7acfd9 253 ProSitePatterns PS01242 Zinc finger FPG-type signature. 228 252 - T 12-10-2018 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 JDM601_4139 37e4de98586391b05f91fa9d1572341c 186 SUPERFAMILY SSF46689 7 75 3.33E-17 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JDM601_4139 37e4de98586391b05f91fa9d1572341c 186 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 15 28 1.4E-8 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_4139 37e4de98586391b05f91fa9d1572341c 186 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 36 59 1.4E-8 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_4139 37e4de98586391b05f91fa9d1572341c 186 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 61 4.8E-13 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_4139 37e4de98586391b05f91fa9d1572341c 186 Gene3D G3DSA:1.10.357.10 6 183 2.4E-22 T 12-10-2018 JDM601_0289 591ed7a68534dd8576d8133cbbd2a303 299 SUPERFAMILY SSF53335 14 282 2.82E-70 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JDM601_0289 591ed7a68534dd8576d8133cbbd2a303 299 Pfam PF04072 Leucine carboxyl methyltransferase 18 198 1.4E-58 T 12-10-2018 IPR007213 Methyltransferase Ppm1/Ppm2/Tcmp GO:0008168|GO:0032259 JDM601_0289 591ed7a68534dd8576d8133cbbd2a303 299 TIGRFAM TIGR00027 mthyl_TIGR00027: methyltransferase, TIGR00027 family 16 275 2.2E-84 T 12-10-2018 IPR011610 S-adenosyl-L-methionine-dependent methyltransferase, putative GO:0008168 JDM601_0289 591ed7a68534dd8576d8133cbbd2a303 299 Gene3D G3DSA:3.40.50.150 1 298 1.1E-82 T 12-10-2018 JDM601_2006 7ea188793903a29a90d5a13f93fa9156 140 Gene3D G3DSA:2.60.40.2880 49 140 3.3E-29 T 12-10-2018 IPR038468 Transport accessory protein MmpS, soluble domain superfamily JDM601_2006 7ea188793903a29a90d5a13f93fa9156 140 Pfam PF05423 Mycobacterium membrane protein 2 139 3.7E-44 T 12-10-2018 IPR008693 Transport accessory protein MmpS JDM601_3041 8e67da1bc98716b59f6a25e98db89e82 200 PIRSF PIRSF006305 1 190 4.8E-32 T 12-10-2018 IPR003697 Maf-like protein GO:0047429 JDM601_3041 8e67da1bc98716b59f6a25e98db89e82 200 Pfam PF02545 Maf-like protein 3 182 2.4E-36 T 12-10-2018 IPR003697 Maf-like protein GO:0047429 JDM601_3041 8e67da1bc98716b59f6a25e98db89e82 200 Gene3D G3DSA:3.90.950.10 1 189 5.8E-48 T 12-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like JDM601_3041 8e67da1bc98716b59f6a25e98db89e82 200 TIGRFAM TIGR00172 maf: septum formation protein Maf 2 181 8.9E-37 T 12-10-2018 IPR003697 Maf-like protein GO:0047429 JDM601_3041 8e67da1bc98716b59f6a25e98db89e82 200 SUPERFAMILY SSF52972 2 181 3.01E-40 T 12-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like JDM601_3041 8e67da1bc98716b59f6a25e98db89e82 200 Hamap MF_00528 Septum formation protein Maf [maf]. 1 188 20.937 T 12-10-2018 IPR003697 Maf-like protein GO:0047429 JDM601_0643 66f51cf9415afbf26656059d5514ee49 1097 SUPERFAMILY SSF52540 16 697 4.25E-87 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_0643 66f51cf9415afbf26656059d5514ee49 1097 TIGRFAM TIGR00609 recB: exodeoxyribonuclease V, beta subunit 199 1091 3.6E-229 T 12-10-2018 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 JDM601_0643 66f51cf9415afbf26656059d5514ee49 1097 Pfam PF00580 UvrD/REP helicase N-terminal domain 15 308 6.6E-55 T 12-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 JDM601_0643 66f51cf9415afbf26656059d5514ee49 1097 SUPERFAMILY SSF52980 778 1092 4.56E-59 T 12-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 JDM601_0643 66f51cf9415afbf26656059d5514ee49 1097 Pfam PF13361 UvrD-like helicase C-terminal domain 593 691 6.6E-7 T 12-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 JDM601_0643 66f51cf9415afbf26656059d5514ee49 1097 Gene3D G3DSA:1.10.486.10 453 594 8.6E-69 T 12-10-2018 JDM601_0643 66f51cf9415afbf26656059d5514ee49 1097 Gene3D G3DSA:3.40.50.300 320 697 8.6E-69 T 12-10-2018 JDM601_0643 66f51cf9415afbf26656059d5514ee49 1097 Hamap MF_01485 RecBCD enzyme subunit RecB [recB]. 3 1092 16.55 T 12-10-2018 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 JDM601_0643 66f51cf9415afbf26656059d5514ee49 1097 Gene3D G3DSA:3.90.320.10 768 1096 3.1E-77 T 12-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal JDM601_1776 ba6d82062a1dcac232b1521e5fff9d81 235 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 102 115 4.8E-9 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 JDM601_1776 ba6d82062a1dcac232b1521e5fff9d81 235 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 132 148 4.8E-9 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 JDM601_1776 ba6d82062a1dcac232b1521e5fff9d81 235 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 150 170 4.8E-9 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 JDM601_1776 ba6d82062a1dcac232b1521e5fff9d81 235 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 4 15 4.8E-9 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 JDM601_1776 ba6d82062a1dcac232b1521e5fff9d81 235 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 188 1.2E-27 T 12-10-2018 JDM601_1776 ba6d82062a1dcac232b1521e5fff9d81 235 SUPERFAMILY SSF56784 4 191 2.0E-46 T 12-10-2018 IPR036412 HAD-like superfamily JDM601_1776 ba6d82062a1dcac232b1521e5fff9d81 235 Gene3D G3DSA:1.10.150.240 17 89 3.0E-46 T 12-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 JDM601_1776 ba6d82062a1dcac232b1521e5fff9d81 235 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 84 188 7.9E-14 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 JDM601_1776 ba6d82062a1dcac232b1521e5fff9d81 235 Gene3D G3DSA:3.40.50.1000 5 191 3.0E-46 T 12-10-2018 IPR023214 HAD superfamily JDM601_2850 1ae06e54fc0da800aeedddbd0e998134 403 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 247 395 3.7E-35 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 JDM601_2850 1ae06e54fc0da800aeedddbd0e998134 403 Gene3D G3DSA:1.20.140.10 248 402 5.4E-32 T 12-10-2018 JDM601_2850 1ae06e54fc0da800aeedddbd0e998134 403 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 132 226 4.4E-24 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 JDM601_2850 1ae06e54fc0da800aeedddbd0e998134 403 Gene3D G3DSA:2.40.110.10 131 247 4.8E-35 T 12-10-2018 JDM601_2850 1ae06e54fc0da800aeedddbd0e998134 403 SUPERFAMILY SSF56645 3 237 1.7E-44 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 JDM601_2850 1ae06e54fc0da800aeedddbd0e998134 403 SUPERFAMILY SSF47203 246 398 1.24E-32 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 JDM601_1535 5cff952643333b2ea609de253a7c06cd 862 SUPERFAMILY SSF63380 15 111 7.07E-8 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel JDM601_1535 5cff952643333b2ea609de253a7c06cd 862 Gene3D G3DSA:3.40.50.300 610 854 4.7E-83 T 12-10-2018 JDM601_1535 5cff952643333b2ea609de253a7c06cd 862 Pfam PF08021 Siderophore-interacting FAD-binding domain 66 111 1.3E-9 T 12-10-2018 IPR013113 FAD-binding 9, siderophore-interacting JDM601_1535 5cff952643333b2ea609de253a7c06cd 862 ProSitePatterns PS00211 ABC transporters family signature. 752 766 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JDM601_1535 5cff952643333b2ea609de253a7c06cd 862 SMART SM00382 641 826 4.8E-18 T 12-10-2018 IPR003593 AAA+ ATPase domain JDM601_1535 5cff952643333b2ea609de253a7c06cd 862 Gene3D G3DSA:2.40.30.10 15 117 4.1E-21 T 12-10-2018 JDM601_1535 5cff952643333b2ea609de253a7c06cd 862 Pfam PF00005 ABC transporter 633 780 2.4E-30 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JDM601_1535 5cff952643333b2ea609de253a7c06cd 862 SUPERFAMILY SSF52540 610 848 1.15E-82 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_1535 5cff952643333b2ea609de253a7c06cd 862 Gene3D G3DSA:3.40.50.80 126 256 4.3E-21 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain JDM601_1535 5cff952643333b2ea609de253a7c06cd 862 Pfam PF00664 ABC transporter transmembrane region 298 493 1.6E-16 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 JDM601_1535 5cff952643333b2ea609de253a7c06cd 862 SUPERFAMILY SSF90123 288 594 9.94E-43 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JDM601_1535 5cff952643333b2ea609de253a7c06cd 862 Pfam PF04954 Siderophore-interacting protein 133 243 7.8E-23 T 12-10-2018 IPR007037 Siderophore-interacting protein, C-terminal domain JDM601_1535 5cff952643333b2ea609de253a7c06cd 862 Gene3D G3DSA:1.20.1560.10 271 597 1.7E-36 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JDM601_0873 7b218c07b9769a640b60d9c9394d26b3 305 SUPERFAMILY SSF47240 2 297 4.65E-82 T 12-10-2018 IPR009078 Ferritin-like superfamily JDM601_0873 7b218c07b9769a640b60d9c9394d26b3 305 Gene3D G3DSA:1.10.620.20 1 269 3.3E-110 T 12-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 JDM601_0873 7b218c07b9769a640b60d9c9394d26b3 305 PIRSF PIRSF000346 1 305 8.1E-93 T 12-10-2018 IPR005067 Fatty acid desaturase, type 2 GO:0006631|GO:0045300|GO:0055114 JDM601_0873 7b218c07b9769a640b60d9c9394d26b3 305 Pfam PF03405 Fatty acid desaturase 6 300 2.0E-71 T 12-10-2018 IPR005067 Fatty acid desaturase, type 2 GO:0006631|GO:0045300|GO:0055114 JDM601_1233 beee80ed78ca9c68361dc1c50774a68b 384 Pfam PF00155 Aminotransferase class I and II 60 377 5.1E-33 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 JDM601_1233 beee80ed78ca9c68361dc1c50774a68b 384 SUPERFAMILY SSF53383 22 383 9.93E-86 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase JDM601_1233 beee80ed78ca9c68361dc1c50774a68b 384 Gene3D G3DSA:3.40.640.10 58 281 1.5E-120 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 JDM601_1233 beee80ed78ca9c68361dc1c50774a68b 384 Gene3D G3DSA:3.90.1150.10 20 375 1.5E-120 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 JDM601_0454 64773aea1589dbc2146abdcc043b958c 182 SUPERFAMILY SSF69118 32 180 2.67E-27 T 12-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 JDM601_0454 64773aea1589dbc2146abdcc043b958c 182 Gene3D G3DSA:1.20.1290.10 25 181 7.2E-25 T 12-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 JDM601_0454 64773aea1589dbc2146abdcc043b958c 182 Pfam PF02627 Carboxymuconolactone decarboxylase family 46 106 2.9E-8 T 12-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 JDM601_0852 208397e99ecc50f0918067ee794ef319 409 Gene3D G3DSA:1.10.540.10 2 122 3.5E-30 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 JDM601_0852 208397e99ecc50f0918067ee794ef319 409 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 127 209 8.2E-16 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 JDM601_0852 208397e99ecc50f0918067ee794ef319 409 SUPERFAMILY SSF47203 234 409 5.35E-22 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 JDM601_0852 208397e99ecc50f0918067ee794ef319 409 Gene3D G3DSA:1.20.140.10 238 409 9.2E-35 T 12-10-2018 JDM601_0852 208397e99ecc50f0918067ee794ef319 409 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 233 406 5.9E-20 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 JDM601_0852 208397e99ecc50f0918067ee794ef319 409 Gene3D G3DSA:2.40.110.10 127 237 2.2E-31 T 12-10-2018 JDM601_0852 208397e99ecc50f0918067ee794ef319 409 SUPERFAMILY SSF56645 2 244 2.75E-68 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 JDM601_0852 208397e99ecc50f0918067ee794ef319 409 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 7 123 2.6E-20 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 JDM601_2382 74841efad3e27e7908f6c0e4acd4723a 251 Gene3D G3DSA:3.30.70.980 134 206 5.8E-51 T 12-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 JDM601_2382 74841efad3e27e7908f6c0e4acd4723a 251 Pfam PF01709 Transcriptional regulator 5 238 3.5E-87 T 12-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 JDM601_2382 74841efad3e27e7908f6c0e4acd4723a 251 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 1 238 1.8E-97 T 12-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 JDM601_2382 74841efad3e27e7908f6c0e4acd4723a 251 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 3 240 34.141 T 12-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 JDM601_2382 74841efad3e27e7908f6c0e4acd4723a 251 Gene3D G3DSA:3.30.70.980 86 237 5.8E-51 T 12-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 JDM601_2382 74841efad3e27e7908f6c0e4acd4723a 251 Gene3D G3DSA:1.10.10.200 1 80 3.5E-30 T 12-10-2018 IPR017856 Integrase-like, N-terminal JDM601_2382 74841efad3e27e7908f6c0e4acd4723a 251 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 186 196 - T 12-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site JDM601_2382 74841efad3e27e7908f6c0e4acd4723a 251 SUPERFAMILY SSF75625 3 246 1.57E-87 T 12-10-2018 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 JDM601_2887 4c3b60179237941391a7f3ee2fc2444b 454 Pfam PF02667 Short chain fatty acid transporter 3 446 3.1E-99 T 12-10-2018 IPR006160 Short chain fatty acid transporter AtoE JDM601_3122 285207c4c93c792036545fa6ab5912cc 458 Pfam PF02720 Domain of unknown function (DUF222) 37 358 2.4E-80 T 12-10-2018 IPR003870 Domain of unknown function DUF222 JDM601_3122 285207c4c93c792036545fa6ab5912cc 458 ProDom PD008243 RV1792C/MT1741/MB1728C RV1945/MT1995 MB1980 MB0098C RV3466/MT3572 VERY RV1128C/MT1160 RV1148C/MT1183 MB1159C RV0095C 1 91 2.0E-20 T 12-10-2018 JDM601_3761 db6051a91cb391ae4e95619303717d5a 509 SUPERFAMILY SSF52096 4 235 7.76E-57 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily JDM601_3761 db6051a91cb391ae4e95619303717d5a 509 SUPERFAMILY SSF52096 211 486 6.55E-69 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily JDM601_3761 db6051a91cb391ae4e95619303717d5a 509 Gene3D G3DSA:3.90.226.10 246 509 3.0E-81 T 12-10-2018 JDM601_3761 db6051a91cb391ae4e95619303717d5a 509 Pfam PF01039 Carboxyl transferase domain 27 495 5.9E-117 T 12-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 JDM601_3761 db6051a91cb391ae4e95619303717d5a 509 Gene3D G3DSA:3.90.226.10 1 244 4.3E-72 T 12-10-2018 JDM601_0003 f8ee9c44debff6b517601f3dfafa6860 386 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 1 378 2.3E-129 T 12-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 JDM601_0003 f8ee9c44debff6b517601f3dfafa6860 386 Gene3D G3DSA:1.20.1050.90 120 318 7.3E-92 T 12-10-2018 JDM601_0003 f8ee9c44debff6b517601f3dfafa6860 386 ProSitePatterns PS00618 RecF protein signature 2. 319 337 - T 12-10-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 JDM601_0003 f8ee9c44debff6b517601f3dfafa6860 386 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 386 92.7 T 12-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 JDM601_0003 f8ee9c44debff6b517601f3dfafa6860 386 SUPERFAMILY SSF52540 3 340 6.02E-39 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_0003 f8ee9c44debff6b517601f3dfafa6860 386 Gene3D G3DSA:3.40.50.300 7 351 7.3E-92 T 12-10-2018 JDM601_0003 f8ee9c44debff6b517601f3dfafa6860 386 ProSitePatterns PS00617 RecF protein signature 1. 117 137 - T 12-10-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 JDM601_0003 f8ee9c44debff6b517601f3dfafa6860 386 Pfam PF02463 RecF/RecN/SMC N terminal domain 2 352 1.1E-18 T 12-10-2018 IPR003395 RecF/RecN/SMC, N-terminal JDM601_1607 854e3d508b028ef82f08a075991d2bd2 286 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 172 191 3.3E-9 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_1607 854e3d508b028ef82f08a075991d2bd2 286 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 160 3.3E-9 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_1607 854e3d508b028ef82f08a075991d2bd2 286 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 98 109 3.3E-9 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_1607 854e3d508b028ef82f08a075991d2bd2 286 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 193 210 6.6E-23 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_1607 854e3d508b028ef82f08a075991d2bd2 286 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 22 39 6.6E-23 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_1607 854e3d508b028ef82f08a075991d2bd2 286 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 191 6.6E-23 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_1607 854e3d508b028ef82f08a075991d2bd2 286 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 146 162 6.6E-23 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_1607 854e3d508b028ef82f08a075991d2bd2 286 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 98 109 6.6E-23 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_1607 854e3d508b028ef82f08a075991d2bd2 286 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 159 187 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 JDM601_1607 854e3d508b028ef82f08a075991d2bd2 286 Gene3D G3DSA:3.40.50.720 20 268 3.4E-60 T 12-10-2018 JDM601_1607 854e3d508b028ef82f08a075991d2bd2 286 Pfam PF00106 short chain dehydrogenase 22 211 2.2E-44 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_1607 854e3d508b028ef82f08a075991d2bd2 286 SUPERFAMILY SSF51735 23 276 2.13E-58 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_3492 d22a71f7cebfcbcf89b6b1afca9237df 69 Pfam PF13459 4Fe-4S single cluster domain 3 61 2.9E-14 T 12-10-2018 JDM601_3492 d22a71f7cebfcbcf89b6b1afca9237df 69 Gene3D G3DSA:3.30.70.20 1 64 3.8E-19 T 12-10-2018 JDM601_3492 d22a71f7cebfcbcf89b6b1afca9237df 69 SUPERFAMILY SSF54862 2 61 6.51E-10 T 12-10-2018 JDM601_2781 1687c64e699beb080d293fa13ae78c6d 509 Pfam PF00743 Flavin-binding monooxygenase-like 24 238 1.2E-17 T 12-10-2018 IPR020946 Flavin monooxygenase-like GO:0004499|GO:0050660|GO:0050661|GO:0055114 JDM601_2781 1687c64e699beb080d293fa13ae78c6d 509 Gene3D G3DSA:3.50.50.60 325 506 4.4E-38 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_2781 1687c64e699beb080d293fa13ae78c6d 509 SUPERFAMILY SSF51905 24 428 3.45E-56 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_2781 1687c64e699beb080d293fa13ae78c6d 509 Gene3D G3DSA:3.50.50.60 8 184 6.3E-58 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_2345 b1c7e3e560866613020033993d475d40 449 Pfam PF00296 Luciferase-like monooxygenase 25 393 9.1E-59 T 12-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 JDM601_2345 b1c7e3e560866613020033993d475d40 449 PIRSF PIRSF000337 4 449 2.0E-152 T 12-10-2018 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 JDM601_2345 b1c7e3e560866613020033993d475d40 449 TIGRFAM TIGR03860 FMN_nitrolo: FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family 11 438 6.2E-156 T 12-10-2018 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 JDM601_2345 b1c7e3e560866613020033993d475d40 449 Gene3D G3DSA:3.20.20.30 2 449 1.8E-143 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 JDM601_2345 b1c7e3e560866613020033993d475d40 449 SUPERFAMILY SSF51679 6 444 1.44E-115 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 JDM601_1679 3b92a41c763007b04c11ef6ec0b938de 1008 Gene3D G3DSA:1.20.120.330 854 1008 1.8E-36 T 12-10-2018 JDM601_1679 3b92a41c763007b04c11ef6ec0b938de 1008 Gene3D G3DSA:1.20.120.330 338 494 1.2E-38 T 12-10-2018 JDM601_1679 3b92a41c763007b04c11ef6ec0b938de 1008 SUPERFAMILY SSF81301 72 332 7.85E-56 T 12-10-2018 JDM601_1679 3b92a41c763007b04c11ef6ec0b938de 1008 SUPERFAMILY SSF81301 570 846 1.83E-62 T 12-10-2018 JDM601_1679 3b92a41c763007b04c11ef6ec0b938de 1008 Hamap MF_00802 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme [glnE]. 84 997 16.625 T 12-10-2018 IPR023057 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme GO:0008882 JDM601_1679 3b92a41c763007b04c11ef6ec0b938de 1008 Gene3D G3DSA:3.30.460.100 608 846 5.5E-55 T 12-10-2018 JDM601_1679 3b92a41c763007b04c11ef6ec0b938de 1008 Gene3D G3DSA:3.30.460.100 96 327 2.8E-52 T 12-10-2018 JDM601_1679 3b92a41c763007b04c11ef6ec0b938de 1008 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 129 322 4.7E-34 T 12-10-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 JDM601_1679 3b92a41c763007b04c11ef6ec0b938de 1008 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 598 841 1.3E-64 T 12-10-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 JDM601_1679 3b92a41c763007b04c11ef6ec0b938de 1008 SUPERFAMILY SSF81593 856 1007 1.02E-35 T 12-10-2018 JDM601_1679 3b92a41c763007b04c11ef6ec0b938de 1008 Pfam PF08335 GlnD PII-uridylyltransferase 865 1006 1.3E-20 T 12-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 JDM601_1679 3b92a41c763007b04c11ef6ec0b938de 1008 Pfam PF08335 GlnD PII-uridylyltransferase 345 492 2.0E-34 T 12-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 JDM601_1679 3b92a41c763007b04c11ef6ec0b938de 1008 SUPERFAMILY SSF81593 338 492 1.41E-33 T 12-10-2018 JDM601_2228 09fcd3c016bbffbdaf80354a65aaae36 144 SUPERFAMILY SSF141322 77 143 7.45E-9 T 12-10-2018 JDM601_2228 09fcd3c016bbffbdaf80354a65aaae36 144 Gene3D G3DSA:2.40.50.140 83 142 1.3E-19 T 12-10-2018 JDM601_2228 09fcd3c016bbffbdaf80354a65aaae36 144 Pfam PF01957 NfeD-like C-terminal, partner-binding 6 142 1.3E-23 T 12-10-2018 IPR002810 NfeD-like, C-terminal domain JDM601_2971 7725e1fa5e17c67c58da67097a45f51b 928 Gene3D G3DSA:3.40.50.300 18 393 7.5E-181 T 12-10-2018 JDM601_2971 7725e1fa5e17c67c58da67097a45f51b 928 Pfam PF07517 SecA DEAD-like domain 7 379 3.1E-127 T 12-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 JDM601_2971 7725e1fa5e17c67c58da67097a45f51b 928 Gene3D G3DSA:1.10.3060.10 614 834 1.5E-73 T 12-10-2018 JDM601_2971 7725e1fa5e17c67c58da67097a45f51b 928 SUPERFAMILY SSF52540 4 393 4.46E-78 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_2971 7725e1fa5e17c67c58da67097a45f51b 928 Gene3D G3DSA:3.40.50.300 395 612 4.5E-91 T 12-10-2018 JDM601_2971 7725e1fa5e17c67c58da67097a45f51b 928 ProSitePatterns PS01312 SecA family signature. 478 493 - T 12-10-2018 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 JDM601_2971 7725e1fa5e17c67c58da67097a45f51b 928 SUPERFAMILY SSF52540 395 611 6.25E-62 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_2971 7725e1fa5e17c67c58da67097a45f51b 928 PRINTS PR00906 SecA protein signature 391 404 2.9E-68 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 JDM601_2971 7725e1fa5e17c67c58da67097a45f51b 928 PRINTS PR00906 SecA protein signature 166 186 2.9E-68 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 JDM601_2971 7725e1fa5e17c67c58da67097a45f51b 928 PRINTS PR00906 SecA protein signature 97 111 2.9E-68 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 JDM601_2971 7725e1fa5e17c67c58da67097a45f51b 928 PRINTS PR00906 SecA protein signature 59 83 2.9E-68 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 JDM601_2971 7725e1fa5e17c67c58da67097a45f51b 928 PRINTS PR00906 SecA protein signature 113 123 2.9E-68 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 JDM601_2971 7725e1fa5e17c67c58da67097a45f51b 928 PRINTS PR00906 SecA protein signature 317 339 2.9E-68 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 JDM601_2971 7725e1fa5e17c67c58da67097a45f51b 928 PRINTS PR00906 SecA protein signature 354 371 2.9E-68 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 JDM601_2971 7725e1fa5e17c67c58da67097a45f51b 928 SUPERFAMILY SSF81767 223 346 9.16E-43 T 12-10-2018 IPR036670 SecA, preprotein cross-linking domain superfamily GO:0016020|GO:0017038 JDM601_2971 7725e1fa5e17c67c58da67097a45f51b 928 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 24 817 0.0 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 JDM601_2971 7725e1fa5e17c67c58da67097a45f51b 928 Gene3D G3DSA:3.90.1440.10 225 346 7.5E-181 T 12-10-2018 JDM601_2971 7725e1fa5e17c67c58da67097a45f51b 928 SMART SM00957 2 380 3.1E-275 T 12-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 JDM601_2971 7725e1fa5e17c67c58da67097a45f51b 928 Pfam PF01043 SecA preprotein cross-linking domain 228 336 2.0E-34 T 12-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 JDM601_2971 7725e1fa5e17c67c58da67097a45f51b 928 SMART SM00958 224 336 2.3E-61 T 12-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 JDM601_2971 7725e1fa5e17c67c58da67097a45f51b 928 SUPERFAMILY SSF81886 614 831 1.11E-73 T 12-10-2018 IPR036266 SecA, Wing/Scaffold superfamily JDM601_2971 7725e1fa5e17c67c58da67097a45f51b 928 Hamap MF_01382 Protein translocase subunit SecA [secA]. 1 833 19.716 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 JDM601_2971 7725e1fa5e17c67c58da67097a45f51b 928 Pfam PF07516 SecA Wing and Scaffold domain 610 830 4.0E-67 T 12-10-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 JDM601_1234 7382ea50b89579fd04b777ef62d14f14 370 Pfam PF16701 Adenylate cyclase regulatory domain 3 187 1.0E-81 T 12-10-2018 IPR032026 Adenylate cyclase regulatory domain JDM601_1234 7382ea50b89579fd04b777ef62d14f14 370 Gene3D G3DSA:3.30.70.1230 187 366 3.2E-60 T 12-10-2018 IPR029787 Nucleotide cyclase JDM601_1234 7382ea50b89579fd04b777ef62d14f14 370 SUPERFAMILY SSF55073 207 367 1.13E-34 T 12-10-2018 IPR029787 Nucleotide cyclase JDM601_1234 7382ea50b89579fd04b777ef62d14f14 370 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 207 362 1.2E-15 T 12-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 JDM601_1234 7382ea50b89579fd04b777ef62d14f14 370 SMART SM00044 155 346 3.1E-5 T 12-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 JDM601_2978 8a09e5e6c66d672a96645059345102a9 213 SMART SM00421 147 204 3.5E-25 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JDM601_2978 8a09e5e6c66d672a96645059345102a9 213 ProSitePatterns PS00622 LuxR-type HTH domain signature. 164 191 - T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JDM601_2978 8a09e5e6c66d672a96645059345102a9 213 Gene3D G3DSA:3.40.50.12740 2 208 3.0E-62 T 12-10-2018 JDM601_2978 8a09e5e6c66d672a96645059345102a9 213 SUPERFAMILY SSF52172 3 181 4.82E-29 T 12-10-2018 IPR011006 CheY-like superfamily JDM601_2978 8a09e5e6c66d672a96645059345102a9 213 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 180 192 1.6E-12 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JDM601_2978 8a09e5e6c66d672a96645059345102a9 213 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 150 164 1.6E-12 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JDM601_2978 8a09e5e6c66d672a96645059345102a9 213 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 164 180 1.6E-12 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JDM601_2978 8a09e5e6c66d672a96645059345102a9 213 Pfam PF00196 Bacterial regulatory proteins, luxR family 150 204 9.4E-19 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JDM601_2978 8a09e5e6c66d672a96645059345102a9 213 Pfam PF00072 Response regulator receiver domain 4 115 5.9E-23 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JDM601_2978 8a09e5e6c66d672a96645059345102a9 213 SMART SM00448 2 115 1.5E-25 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JDM601_0935 bb8a78dbf1c5c7f42d9c71e9716f7f23 150 Pfam PF00994 Probable molybdopterin binding domain 2 135 1.9E-23 T 12-10-2018 IPR001453 MoaB/Mog domain JDM601_0935 bb8a78dbf1c5c7f42d9c71e9716f7f23 150 SMART SM00852 1 141 2.0E-11 T 12-10-2018 IPR001453 MoaB/Mog domain JDM601_0935 bb8a78dbf1c5c7f42d9c71e9716f7f23 150 Gene3D G3DSA:3.40.980.10 1 149 1.1E-43 T 12-10-2018 IPR036425 MoaB/Mog-like domain superfamily JDM601_0935 bb8a78dbf1c5c7f42d9c71e9716f7f23 150 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 2 134 1.2E-27 T 12-10-2018 IPR001453 MoaB/Mog domain JDM601_0935 bb8a78dbf1c5c7f42d9c71e9716f7f23 150 SUPERFAMILY SSF53218 8 146 1.44E-30 T 12-10-2018 IPR036425 MoaB/Mog-like domain superfamily JDM601_0713 8f7c6679eb0cf50ccc406c2f1a06fb35 133 SUPERFAMILY SSF52242 3 126 1.16E-42 T 12-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 JDM601_0713 8f7c6679eb0cf50ccc406c2f1a06fb35 133 Gene3D G3DSA:3.40.50.280 1 133 2.7E-50 T 12-10-2018 JDM601_0713 8f7c6679eb0cf50ccc406c2f1a06fb35 133 Pfam PF02310 B12 binding domain 4 115 2.0E-23 T 12-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 JDM601_0713 8f7c6679eb0cf50ccc406c2f1a06fb35 133 TIGRFAM TIGR00640 acid_CoA_mut_C: methylmalonyl-CoA mutase C-terminal domain 4 129 3.5E-44 T 12-10-2018 IPR006159 Methylmalonyl-CoA mutase, C-terminal GO:0016853 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 JDM601_0561 4bafefffbd89897eef3ca761de54c12b 163 SUPERFAMILY SSF89963 5 89 2.62E-26 T 12-10-2018 IPR036183 YajQ-like superfamily JDM601_0561 4bafefffbd89897eef3ca761de54c12b 163 Pfam PF04461 Protein of unknown function (DUF520) 4 163 2.4E-60 T 12-10-2018 IPR007551 Protein of unknown function DUF520 JDM601_0561 4bafefffbd89897eef3ca761de54c12b 163 Gene3D G3DSA:3.30.70.990 11 100 2.5E-61 T 12-10-2018 IPR035570 UPF0234, N-terminal JDM601_0561 4bafefffbd89897eef3ca761de54c12b 163 Hamap MF_00632 UPF0234 protein YajQ [yajQ]. 3 163 26.059 T 12-10-2018 IPR007551 Protein of unknown function DUF520 JDM601_0561 4bafefffbd89897eef3ca761de54c12b 163 SUPERFAMILY SSF89963 91 163 2.09E-24 T 12-10-2018 IPR036183 YajQ-like superfamily JDM601_0561 4bafefffbd89897eef3ca761de54c12b 163 Gene3D G3DSA:3.30.70.860 5 163 2.5E-61 T 12-10-2018 IPR035571 UPF0234-like, C-terminal JDM601_0495 18ad2331dcf09af49fab3c23ca7809a1 286 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 165 281 3.1E-41 T 12-10-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 JDM601_0495 18ad2331dcf09af49fab3c23ca7809a1 286 Gene3D G3DSA:1.10.3730.10 168 284 7.5E-39 T 12-10-2018 JDM601_0495 18ad2331dcf09af49fab3c23ca7809a1 286 PIRSF PIRSF000193 1 284 1.1E-69 T 12-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 JDM601_0495 18ad2331dcf09af49fab3c23ca7809a1 286 Gene3D G3DSA:3.40.50.720 1 167 2.5E-46 T 12-10-2018 JDM601_0495 18ad2331dcf09af49fab3c23ca7809a1 286 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 4 281 8.2E-87 T 12-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 JDM601_0495 18ad2331dcf09af49fab3c23ca7809a1 286 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 2 281 28.351 T 12-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 JDM601_0495 18ad2331dcf09af49fab3c23ca7809a1 286 SUPERFAMILY SSF48179 164 281 1.55E-31 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 JDM601_0495 18ad2331dcf09af49fab3c23ca7809a1 286 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 237 259 - T 12-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 JDM601_0495 18ad2331dcf09af49fab3c23ca7809a1 286 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 3 102 1.3E-22 T 12-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal JDM601_0495 18ad2331dcf09af49fab3c23ca7809a1 286 SUPERFAMILY SSF51735 3 163 1.95E-35 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_3291 6b00a3d892116e25bb5459afaca507ee 506 Gene3D G3DSA:3.40.605.10 24 467 5.0E-150 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 JDM601_3291 6b00a3d892116e25bb5459afaca507ee 506 Gene3D G3DSA:3.40.309.10 250 459 5.0E-150 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 JDM601_3291 6b00a3d892116e25bb5459afaca507ee 506 Pfam PF00171 Aldehyde dehydrogenase family 19 486 1.1E-137 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 JDM601_3291 6b00a3d892116e25bb5459afaca507ee 506 SUPERFAMILY SSF53720 3 490 1.18E-149 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 JDM601_3291 6b00a3d892116e25bb5459afaca507ee 506 TIGRFAM TIGR01722 MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 6 490 2.2E-186 T 12-10-2018 IPR010061 Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00640+1.2.1.27|MetaCyc: PWY-5642|Reactome: R-HSA-70895 JDM601_3291 6b00a3d892116e25bb5459afaca507ee 506 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 275 286 - T 12-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 JDM601_3558 fc237a6b540f5b9882ac71ed37bb9d7b 204 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 22 35 3.8E-13 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_3558 fc237a6b540f5b9882ac71ed37bb9d7b 204 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 43 66 3.8E-13 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_3558 fc237a6b540f5b9882ac71ed37bb9d7b 204 SUPERFAMILY SSF48498 97 201 2.82E-5 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily JDM601_3558 fc237a6b540f5b9882ac71ed37bb9d7b 204 SUPERFAMILY SSF46689 9 88 2.31E-22 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JDM601_3558 fc237a6b540f5b9882ac71ed37bb9d7b 204 Pfam PF00440 Bacterial regulatory proteins, tetR family 22 68 1.5E-18 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_3558 fc237a6b540f5b9882ac71ed37bb9d7b 204 Gene3D G3DSA:1.10.357.10 12 201 3.3E-33 T 12-10-2018 JDM601_1799 20d21056c7f880e41ce9f84acddd3ff6 143 Hamap MF_00265 tRNA(fMet)-specific endonuclease VapC [vapC]. 2 137 15.433 T 12-10-2018 IPR022907 VapC family GO:0004540 JDM601_1799 20d21056c7f880e41ce9f84acddd3ff6 143 SUPERFAMILY SSF88723 1 138 1.04E-18 T 12-10-2018 IPR029060 PIN-like domain superfamily JDM601_1799 20d21056c7f880e41ce9f84acddd3ff6 143 Gene3D G3DSA:3.40.50.1010 3 137 1.8E-5 T 12-10-2018 JDM601_1799 20d21056c7f880e41ce9f84acddd3ff6 143 TIGRFAM TIGR00028 Mtu_PIN_fam: toxin-antitoxin system PIN domain toxin 1 139 7.0E-42 T 12-10-2018 IPR006226 PIN domain toxin GO:0016788 JDM601_1799 20d21056c7f880e41ce9f84acddd3ff6 143 Pfam PF01850 PIN domain 3 132 2.3E-12 T 12-10-2018 IPR002716 PIN domain JDM601_0218 30db8c54e99464c8e2a59f01cb1bde47 1425 Pfam PF00754 F5/8 type C domain 728 807 8.9E-7 T 12-10-2018 IPR000421 Coagulation factor 5/8 C-terminal domain JDM601_0218 30db8c54e99464c8e2a59f01cb1bde47 1425 SUPERFAMILY SSF49785 725 845 2.06E-13 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily JDM601_0218 30db8c54e99464c8e2a59f01cb1bde47 1425 Gene3D G3DSA:2.60.120.260 726 862 1.5E-8 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily JDM601_0218 30db8c54e99464c8e2a59f01cb1bde47 1425 SUPERFAMILY SSF49785 971 1097 1.98E-5 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily JDM601_0218 30db8c54e99464c8e2a59f01cb1bde47 1425 Pfam PF11847 Domain of unknown function (DUF3367) 16 708 3.9E-280 T 12-10-2018 IPR021798 Alpha-(1->3)-arabinofuranosyltransferase GO:0016740 KEGG: 00571+2.4.2.47|KEGG: 00572+2.4.2.47|MetaCyc: PWY-6397 JDM601_2741 e4e3304fc6c5c06c051317e05a963e58 358 Pfam PF03054 tRNA methyl transferase 2 353 4.5E-110 T 12-10-2018 JDM601_2741 e4e3304fc6c5c06c051317e05a963e58 358 Gene3D G3DSA:2.30.30.280 207 272 1.1E-14 T 12-10-2018 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 JDM601_2741 e4e3304fc6c5c06c051317e05a963e58 358 Gene3D G3DSA:2.40.30.10 275 356 2.3E-7 T 12-10-2018 JDM601_2741 e4e3304fc6c5c06c051317e05a963e58 358 Gene3D G3DSA:3.40.50.620 1 205 8.0E-72 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JDM601_2741 e4e3304fc6c5c06c051317e05a963e58 358 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 1 354 35.594 T 12-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 JDM601_2741 e4e3304fc6c5c06c051317e05a963e58 358 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 2 341 4.8E-82 T 12-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 JDM601_2741 e4e3304fc6c5c06c051317e05a963e58 358 SUPERFAMILY SSF52402 2 238 4.85E-47 T 12-10-2018 JDM601_3489 bd7c202f0c703eda9248fe0b6f64d577 288 Gene3D G3DSA:3.40.50.1820 2 287 2.8E-28 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_3489 bd7c202f0c703eda9248fe0b6f64d577 288 SUPERFAMILY SSF53474 4 246 1.61E-30 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_3489 bd7c202f0c703eda9248fe0b6f64d577 288 Pfam PF12697 Alpha/beta hydrolase family 23 245 8.9E-8 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 JDM601_0266 5a2861b38b1aa1150c0ff801e15b3a92 595 Pfam PF09107 Elongation factor SelB, winged helix 547 589 6.6E-14 T 12-10-2018 IPR015191 Translation elongation factor SelB, winged helix, type 3 GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 JDM601_0266 5a2861b38b1aa1150c0ff801e15b3a92 595 Gene3D G3DSA:1.10.10.10 539 593 2.7E-12 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JDM601_0266 5a2861b38b1aa1150c0ff801e15b3a92 595 Gene3D G3DSA:3.40.50.300 2 172 7.1E-38 T 12-10-2018 JDM601_0266 5a2861b38b1aa1150c0ff801e15b3a92 595 SUPERFAMILY SSF50447 177 267 2.16E-17 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily JDM601_0266 5a2861b38b1aa1150c0ff801e15b3a92 595 SUPERFAMILY SSF52540 2 168 5.18E-34 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_0266 5a2861b38b1aa1150c0ff801e15b3a92 595 Gene3D G3DSA:1.10.10.2770 415 535 1.0E-5 T 12-10-2018 JDM601_0266 5a2861b38b1aa1150c0ff801e15b3a92 595 Pfam PF00009 Elongation factor Tu GTP binding domain 4 166 7.3E-20 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JDM601_0266 5a2861b38b1aa1150c0ff801e15b3a92 595 TIGRFAM TIGR00475 selB: selenocysteine-specific translation elongation factor 3 352 4.8E-74 T 12-10-2018 IPR004535 Translation elongation factor, selenocysteine-specific GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 JDM601_0266 5a2861b38b1aa1150c0ff801e15b3a92 595 SUPERFAMILY SSF46785 551 589 1.9E-6 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JDM601_0266 5a2861b38b1aa1150c0ff801e15b3a92 595 Pfam PF03144 Elongation factor Tu domain 2 192 260 1.9E-7 T 12-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 JDM601_0266 5a2861b38b1aa1150c0ff801e15b3a92 595 Gene3D G3DSA:2.40.30.10 175 283 4.1E-21 T 12-10-2018 JDM601_0994 ab361a17e93fa32095ff030e1370c7e4 832 Pfam PF13493 Domain of unknown function (DUF4118) 372 477 2.2E-22 T 12-10-2018 IPR025201 Sensor protein KdpD, transmembrane domain JDM601_0994 ab361a17e93fa32095ff030e1370c7e4 832 Pfam PF00582 Universal stress protein family 228 347 2.0E-9 T 12-10-2018 IPR006016 UspA JDM601_0994 ab361a17e93fa32095ff030e1370c7e4 832 Pfam PF00512 His Kinase A (phospho-acceptor) domain 604 671 5.5E-13 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JDM601_0994 ab361a17e93fa32095ff030e1370c7e4 832 SUPERFAMILY SSF55874 661 824 3.8E-30 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JDM601_0994 ab361a17e93fa32095ff030e1370c7e4 832 SUPERFAMILY SSF47384 594 671 8.04E-14 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 JDM601_0994 ab361a17e93fa32095ff030e1370c7e4 832 PRINTS PR00344 Bacterial sensor protein C-terminal signature 755 769 2.1E-10 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JDM601_0994 ab361a17e93fa32095ff030e1370c7e4 832 PRINTS PR00344 Bacterial sensor protein C-terminal signature 812 825 2.1E-10 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JDM601_0994 ab361a17e93fa32095ff030e1370c7e4 832 PRINTS PR00344 Bacterial sensor protein C-terminal signature 788 806 2.1E-10 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JDM601_0994 ab361a17e93fa32095ff030e1370c7e4 832 PRINTS PR00344 Bacterial sensor protein C-terminal signature 773 783 2.1E-10 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JDM601_0994 ab361a17e93fa32095ff030e1370c7e4 832 SUPERFAMILY SSF52402 228 348 5.76E-14 T 12-10-2018 JDM601_0994 ab361a17e93fa32095ff030e1370c7e4 832 Gene3D G3DSA:3.40.50.620 212 348 1.5E-10 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JDM601_0994 ab361a17e93fa32095ff030e1370c7e4 832 Gene3D G3DSA:1.20.120.620 368 472 2.1E-12 T 12-10-2018 IPR038318 KdpD, transmembrane domain superfamily JDM601_0994 ab361a17e93fa32095ff030e1370c7e4 832 Pfam PF02702 Osmosensitive K+ channel His kinase sensor domain 6 207 8.3E-85 T 12-10-2018 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal GO:0000155|GO:0000160|GO:0004673|GO:0016020 JDM601_0994 ab361a17e93fa32095ff030e1370c7e4 832 Gene3D G3DSA:1.10.287.130 594 669 7.3E-14 T 12-10-2018 JDM601_0994 ab361a17e93fa32095ff030e1370c7e4 832 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 720 824 7.0E-18 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JDM601_0994 ab361a17e93fa32095ff030e1370c7e4 832 SMART SM00388 603 671 3.4E-15 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JDM601_0994 ab361a17e93fa32095ff030e1370c7e4 832 SMART SM00387 719 828 3.3E-25 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JDM601_0994 ab361a17e93fa32095ff030e1370c7e4 832 Gene3D G3DSA:3.40.50.300 5 206 1.6E-84 T 12-10-2018 JDM601_0994 ab361a17e93fa32095ff030e1370c7e4 832 Gene3D G3DSA:3.30.565.10 679 829 4.5E-27 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JDM601_4102 22b97c71aa16e1246e9f64514b86ed87 1068 Pfam PF14896 EmbC C-terminal domain 689 1067 6.5E-149 T 12-10-2018 IPR032731 Arabinosyltransferase, C-terminal JDM601_4102 22b97c71aa16e1246e9f64514b86ed87 1068 Pfam PF04602 Mycobacterial cell wall arabinan synthesis protein 9 659 7.3E-275 T 12-10-2018 IPR007680 Arabinofuranosyltransferase, N-terminal GO:0052636|GO:0071766 JDM601_4102 22b97c71aa16e1246e9f64514b86ed87 1068 Gene3D G3DSA:2.60.120.940 733 950 2.2E-85 T 12-10-2018 JDM601_4102 22b97c71aa16e1246e9f64514b86ed87 1068 Gene3D G3DSA:2.60.120.610 31 211 1.1E-54 T 12-10-2018 IPR027451 Arabinofuranosyltransferase, domain 1 JDM601_4102 22b97c71aa16e1246e9f64514b86ed87 1068 Gene3D G3DSA:3.40.190.160 718 991 2.2E-85 T 12-10-2018 JDM601_3267 e7ec2f5b4d92e2b55e703f0d3b9f22df 443 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 255 362 1.0E-28 T 12-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JDM601_3267 e7ec2f5b4d92e2b55e703f0d3b9f22df 443 SUPERFAMILY SSF55957 356 441 1.57E-18 T 12-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JDM601_3267 e7ec2f5b4d92e2b55e703f0d3b9f22df 443 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 164 251 2.1E-17 T 12-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JDM601_3267 e7ec2f5b4d92e2b55e703f0d3b9f22df 443 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 93 107 1.1E-10 T 12-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JDM601_3267 e7ec2f5b4d92e2b55e703f0d3b9f22df 443 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 231 246 1.1E-10 T 12-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JDM601_3267 e7ec2f5b4d92e2b55e703f0d3b9f22df 443 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 171 190 1.1E-10 T 12-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JDM601_3267 e7ec2f5b4d92e2b55e703f0d3b9f22df 443 SUPERFAMILY SSF53738 255 362 1.18E-26 T 12-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JDM601_3267 e7ec2f5b4d92e2b55e703f0d3b9f22df 443 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 94 103 - T 12-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JDM601_3267 e7ec2f5b4d92e2b55e703f0d3b9f22df 443 Gene3D G3DSA:3.40.120.10 171 360 3.3E-60 T 12-10-2018 JDM601_3267 e7ec2f5b4d92e2b55e703f0d3b9f22df 443 SUPERFAMILY SSF53738 157 254 2.83E-25 T 12-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JDM601_3267 e7ec2f5b4d92e2b55e703f0d3b9f22df 443 SUPERFAMILY SSF53738 3 178 6.28E-45 T 12-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JDM601_3267 e7ec2f5b4d92e2b55e703f0d3b9f22df 443 Gene3D G3DSA:3.30.310.50 368 443 1.8E-23 T 12-10-2018 JDM601_3267 e7ec2f5b4d92e2b55e703f0d3b9f22df 443 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 3 133 5.7E-42 T 12-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JDM601_3267 e7ec2f5b4d92e2b55e703f0d3b9f22df 443 Gene3D G3DSA:3.40.120.10 254 337 3.3E-60 T 12-10-2018 JDM601_3267 e7ec2f5b4d92e2b55e703f0d3b9f22df 443 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 1 442 43.326 T 12-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JDM601_3267 e7ec2f5b4d92e2b55e703f0d3b9f22df 443 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 5 440 1.1E-180 T 12-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JDM601_3267 e7ec2f5b4d92e2b55e703f0d3b9f22df 443 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 371 439 2.9E-14 T 12-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JDM601_3267 e7ec2f5b4d92e2b55e703f0d3b9f22df 443 Gene3D G3DSA:3.40.120.10 3 152 2.0E-47 T 12-10-2018 JDM601_0665 c80e1d7c45206d0603674e5ebf01dafa 299 Gene3D G3DSA:3.40.50.150 23 299 2.5E-103 T 12-10-2018 JDM601_0665 c80e1d7c45206d0603674e5ebf01dafa 299 SUPERFAMILY SSF53335 24 298 3.34E-74 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JDM601_0665 c80e1d7c45206d0603674e5ebf01dafa 299 Pfam PF02353 Mycolic acid cyclopropane synthetase 17 292 4.3E-116 T 12-10-2018 JDM601_0665 c80e1d7c45206d0603674e5ebf01dafa 299 PIRSF PIRSF003085 1 299 3.0E-102 T 12-10-2018 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 JDM601_4125 6e9e2a3ff44045d1e52703927c69aad6 166 SMART SM00014 50 157 3.2E-10 T 12-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase JDM601_4125 6e9e2a3ff44045d1e52703927c69aad6 166 Gene3D G3DSA:1.20.144.10 79 162 7.2E-14 T 12-10-2018 JDM601_4125 6e9e2a3ff44045d1e52703927c69aad6 166 Pfam PF01569 PAP2 superfamily 58 160 7.9E-17 T 12-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase JDM601_4125 6e9e2a3ff44045d1e52703927c69aad6 166 SUPERFAMILY SSF48317 3 158 9.03E-38 T 12-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily JDM601_1583 dc7230aff79600a4ab79e850db54c293 613 Gene3D G3DSA:3.30.450.40 1 169 3.5E-7 T 12-10-2018 IPR029016 GAF-like domain superfamily JDM601_1583 dc7230aff79600a4ab79e850db54c293 613 SMART SM00065 18 171 6.3E-6 T 12-10-2018 IPR003018 GAF domain GO:0005515 JDM601_1583 dc7230aff79600a4ab79e850db54c293 613 SMART SM00267 163 333 1.0E-43 T 12-10-2018 IPR000160 GGDEF domain JDM601_1583 dc7230aff79600a4ab79e850db54c293 613 Gene3D G3DSA:3.20.20.450 344 599 1.7E-90 T 12-10-2018 IPR035919 EAL domain superfamily JDM601_1583 dc7230aff79600a4ab79e850db54c293 613 SMART SM00052 343 590 8.0E-102 T 12-10-2018 IPR001633 EAL domain JDM601_1583 dc7230aff79600a4ab79e850db54c293 613 Pfam PF00990 Diguanylate cyclase, GGDEF domain 174 329 2.9E-32 T 12-10-2018 IPR000160 GGDEF domain JDM601_1583 dc7230aff79600a4ab79e850db54c293 613 SUPERFAMILY SSF141868 351 599 7.59E-83 T 12-10-2018 IPR035919 EAL domain superfamily JDM601_1583 dc7230aff79600a4ab79e850db54c293 613 SUPERFAMILY SSF55781 23 173 2.45E-10 T 12-10-2018 JDM601_1583 dc7230aff79600a4ab79e850db54c293 613 Gene3D G3DSA:3.30.70.270 170 338 1.2E-42 T 12-10-2018 JDM601_1583 dc7230aff79600a4ab79e850db54c293 613 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 172 331 8.4E-29 T 12-10-2018 IPR000160 GGDEF domain JDM601_1583 dc7230aff79600a4ab79e850db54c293 613 Pfam PF13185 GAF domain 20 159 9.1E-7 T 12-10-2018 IPR003018 GAF domain GO:0005515 JDM601_1583 dc7230aff79600a4ab79e850db54c293 613 Pfam PF00563 EAL domain 351 585 5.5E-70 T 12-10-2018 IPR001633 EAL domain JDM601_1583 dc7230aff79600a4ab79e850db54c293 613 SUPERFAMILY SSF55073 179 332 9.42E-37 T 12-10-2018 IPR029787 Nucleotide cyclase JDM601_3368 33830174a6da6592b2770ec0cb64a39d 343 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 16 175 0.0078 T 12-10-2018 JDM601_3368 33830174a6da6592b2770ec0cb64a39d 343 Gene3D G3DSA:3.40.50.720 5 342 3.4E-85 T 12-10-2018 JDM601_3368 33830174a6da6592b2770ec0cb64a39d 343 Pfam PF01370 NAD dependent epimerase/dehydratase family 18 199 2.0E-26 T 12-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 JDM601_3368 33830174a6da6592b2770ec0cb64a39d 343 SUPERFAMILY SSF51735 13 340 6.35E-54 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_0734 d94ba30d01f6ff557ba82d6dde546db8 568 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 8 172 3.7E-42 T 12-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 JDM601_0734 d94ba30d01f6ff557ba82d6dde546db8 568 Gene3D G3DSA:3.40.50.970 362 563 3.6E-40 T 12-10-2018 JDM601_0734 d94ba30d01f6ff557ba82d6dde546db8 568 Gene3D G3DSA:3.40.50.1220 189 361 2.4E-32 T 12-10-2018 JDM601_0734 d94ba30d01f6ff557ba82d6dde546db8 568 SUPERFAMILY SSF52518 5 183 1.77E-35 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold JDM601_0734 d94ba30d01f6ff557ba82d6dde546db8 568 Gene3D G3DSA:3.40.50.970 5 179 3.5E-44 T 12-10-2018 JDM601_0734 d94ba30d01f6ff557ba82d6dde546db8 568 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 398 542 1.3E-25 T 12-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 JDM601_0734 d94ba30d01f6ff557ba82d6dde546db8 568 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 194 330 1.4E-24 T 12-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 JDM601_0734 d94ba30d01f6ff557ba82d6dde546db8 568 SUPERFAMILY SSF52518 364 559 2.14E-37 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold JDM601_0734 d94ba30d01f6ff557ba82d6dde546db8 568 SUPERFAMILY SSF52467 189 357 1.6E-29 T 12-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily JDM601_0545 01acc675e6c09d3ef15a2e1d709451d9 323 SMART SM00922 89 182 1.1E-14 T 12-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal JDM601_0545 01acc675e6c09d3ef15a2e1d709451d9 323 Pfam PF13378 Enolase C-terminal domain-like 101 281 6.3E-29 T 12-10-2018 IPR029065 Enolase C-terminal domain-like JDM601_0545 01acc675e6c09d3ef15a2e1d709451d9 323 Hamap MF_00470 o-succinylbenzoate synthase [menC]. 7 311 21.672 T 12-10-2018 IPR010196 o-Succinylbenzoate synthase, MenC type1 GO:0000287|GO:0009234|GO:0016836 KEGG: 00130+4.2.1.113|MetaCyc: PWY-5837 JDM601_0545 01acc675e6c09d3ef15a2e1d709451d9 323 SUPERFAMILY SSF51604 75 282 1.57E-45 T 12-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily JDM601_0545 01acc675e6c09d3ef15a2e1d709451d9 323 Gene3D G3DSA:3.20.20.120 69 294 7.6E-115 T 12-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily JDM601_0545 01acc675e6c09d3ef15a2e1d709451d9 323 Gene3D G3DSA:3.30.390.10 16 315 7.6E-115 T 12-10-2018 IPR029017 Enolase-like, N-terminal JDM601_0272 14de12847e61a21a758cae142d5fb7bc 572 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 339 355 1.2E-23 T 12-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 JDM601_0272 14de12847e61a21a758cae142d5fb7bc 572 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 406 421 1.2E-23 T 12-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 JDM601_0272 14de12847e61a21a758cae142d5fb7bc 572 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 300 317 1.2E-23 T 12-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 JDM601_0272 14de12847e61a21a758cae142d5fb7bc 572 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 432 445 1.2E-23 T 12-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 JDM601_0272 14de12847e61a21a758cae142d5fb7bc 572 ProSitePatterns PS01120 Urease nickel ligands signature. 132 145 - T 12-10-2018 IPR029754 Urease nickel binding site GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 JDM601_0272 14de12847e61a21a758cae142d5fb7bc 572 SUPERFAMILY SSF51556 134 571 1.62E-161 T 12-10-2018 IPR032466 Metal-dependent hydrolase JDM601_0272 14de12847e61a21a758cae142d5fb7bc 572 Hamap MF_01953 Urease subunit alpha [ureC]. 2 572 49.683 T 12-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 JDM601_0272 14de12847e61a21a758cae142d5fb7bc 572 SUPERFAMILY SSF51338 2 179 1.42E-54 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 JDM601_0272 14de12847e61a21a758cae142d5fb7bc 572 Gene3D G3DSA:2.30.40.10 4 485 8.4E-250 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 JDM601_0272 14de12847e61a21a758cae142d5fb7bc 572 Gene3D G3DSA:3.20.20.140 134 569 8.4E-250 T 12-10-2018 JDM601_0272 14de12847e61a21a758cae142d5fb7bc 572 Pfam PF00449 Urease alpha-subunit, N-terminal domain 3 124 5.9E-47 T 12-10-2018 IPR011612 Urease alpha-subunit, N-terminal domain KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 JDM601_0272 14de12847e61a21a758cae142d5fb7bc 572 Pfam PF01979 Amidohydrolase family 131 453 1.8E-58 T 12-10-2018 IPR006680 Amidohydrolase-related GO:0016787 JDM601_0272 14de12847e61a21a758cae142d5fb7bc 572 TIGRFAM TIGR01792 urease_alph: urease, alpha subunit 4 571 9.5E-245 T 12-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 JDM601_0999 fe6507083bb5bc97949b98d8e0e8691a 94 Gene3D G3DSA:1.10.287.1060 2 94 9.0E-10 T 12-10-2018 JDM601_0999 fe6507083bb5bc97949b98d8e0e8691a 94 SUPERFAMILY SSF140453 2 93 1.44E-16 T 12-10-2018 IPR036689 ESAT-6-like superfamily JDM601_0999 fe6507083bb5bc97949b98d8e0e8691a 94 Pfam PF06013 Proteins of 100 residues with WXG 3 87 3.4E-13 T 12-10-2018 IPR010310 Type VII secretion system ESAT-6-like JDM601_1904 fe6507083bb5bc97949b98d8e0e8691a 94 Gene3D G3DSA:1.10.287.1060 2 94 9.0E-10 T 12-10-2018 JDM601_1904 fe6507083bb5bc97949b98d8e0e8691a 94 SUPERFAMILY SSF140453 2 93 1.44E-16 T 12-10-2018 IPR036689 ESAT-6-like superfamily JDM601_1904 fe6507083bb5bc97949b98d8e0e8691a 94 Pfam PF06013 Proteins of 100 residues with WXG 3 87 3.4E-13 T 12-10-2018 IPR010310 Type VII secretion system ESAT-6-like JDM601_1896 fe6507083bb5bc97949b98d8e0e8691a 94 Gene3D G3DSA:1.10.287.1060 2 94 9.0E-10 T 12-10-2018 JDM601_1896 fe6507083bb5bc97949b98d8e0e8691a 94 SUPERFAMILY SSF140453 2 93 1.44E-16 T 12-10-2018 IPR036689 ESAT-6-like superfamily JDM601_1896 fe6507083bb5bc97949b98d8e0e8691a 94 Pfam PF06013 Proteins of 100 residues with WXG 3 87 3.4E-13 T 12-10-2018 IPR010310 Type VII secretion system ESAT-6-like JDM601_2357 fe6507083bb5bc97949b98d8e0e8691a 94 Gene3D G3DSA:1.10.287.1060 2 94 9.0E-10 T 12-10-2018 JDM601_2357 fe6507083bb5bc97949b98d8e0e8691a 94 SUPERFAMILY SSF140453 2 93 1.44E-16 T 12-10-2018 IPR036689 ESAT-6-like superfamily JDM601_2357 fe6507083bb5bc97949b98d8e0e8691a 94 Pfam PF06013 Proteins of 100 residues with WXG 3 87 3.4E-13 T 12-10-2018 IPR010310 Type VII secretion system ESAT-6-like JDM601_2906 31d6f9f6785a52a27bdee2a16eb11c79 339 Gene3D G3DSA:2.30.42.10 133 218 2.3E-13 T 12-10-2018 JDM601_2906 31d6f9f6785a52a27bdee2a16eb11c79 339 Pfam PF13180 PDZ domain 135 192 1.7E-9 T 12-10-2018 IPR001478 PDZ domain GO:0005515 JDM601_2906 31d6f9f6785a52a27bdee2a16eb11c79 339 Gene3D G3DSA:3.30.230.10 223 331 9.0E-19 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup JDM601_2906 31d6f9f6785a52a27bdee2a16eb11c79 339 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 236 310 4.0E-8 T 12-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 JDM601_2906 31d6f9f6785a52a27bdee2a16eb11c79 339 SUPERFAMILY SSF50156 133 237 5.86E-15 T 12-10-2018 IPR036034 PDZ superfamily GO:0005515 JDM601_2906 31d6f9f6785a52a27bdee2a16eb11c79 339 SUPERFAMILY SSF54211 232 327 1.78E-17 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold JDM601_3525 054efee1ab15e0cadb0ff046fb887361 204 Gene3D G3DSA:1.10.357.10 15 194 4.8E-12 T 12-10-2018 JDM601_3525 054efee1ab15e0cadb0ff046fb887361 204 SUPERFAMILY SSF46689 17 85 5.64E-8 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JDM601_0229 ac1238ada83f39058cde044e82c9dbb0 614 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 288 455 8.0E-13 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 JDM601_0229 ac1238ada83f39058cde044e82c9dbb0 614 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 162 272 9.8E-18 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 JDM601_0229 ac1238ada83f39058cde044e82c9dbb0 614 SUPERFAMILY SSF56645 44 294 7.2E-41 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 JDM601_0229 ac1238ada83f39058cde044e82c9dbb0 614 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 474 610 4.7E-30 T 12-10-2018 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain JDM601_0229 ac1238ada83f39058cde044e82c9dbb0 614 Pfam PF12418 Acyl-CoA dehydrogenase N terminal 3 34 6.6E-9 T 12-10-2018 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria JDM601_0229 ac1238ada83f39058cde044e82c9dbb0 614 Gene3D G3DSA:1.20.140.10 288 460 1.7E-30 T 12-10-2018 JDM601_0229 ac1238ada83f39058cde044e82c9dbb0 614 Gene3D G3DSA:2.40.110.20 133 286 2.1E-33 T 12-10-2018 JDM601_0229 ac1238ada83f39058cde044e82c9dbb0 614 SUPERFAMILY SSF47203 292 476 4.99E-30 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 JDM601_0912 3e4bdfb52fcf4168ae81d70666af7924 312 Pfam PF07730 Histidine kinase 115 179 5.6E-16 T 12-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 JDM601_0912 3e4bdfb52fcf4168ae81d70666af7924 312 SMART SM00304 50 102 1.6E-6 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JDM601_0912 3e4bdfb52fcf4168ae81d70666af7924 312 Gene3D G3DSA:3.30.565.10 180 305 7.4E-26 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JDM601_0912 3e4bdfb52fcf4168ae81d70666af7924 312 SUPERFAMILY SSF55874 193 305 8.28E-11 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JDM601_0690 f08ad52fed1c6f97710cf826f64d690e 252 Pfam PF00378 Enoyl-CoA hydratase/isomerase 7 234 2.1E-43 T 12-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 JDM601_0690 f08ad52fed1c6f97710cf826f64d690e 252 SUPERFAMILY SSF52096 3 227 1.41E-65 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily JDM601_0690 f08ad52fed1c6f97710cf826f64d690e 252 Gene3D G3DSA:3.90.226.10 1 196 9.2E-78 T 12-10-2018 JDM601_0690 f08ad52fed1c6f97710cf826f64d690e 252 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 95 115 - T 12-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 JDM601_2042 c1c77d3351e29bebe9f2fa0b3452cf46 314 Gene3D G3DSA:3.40.50.720 1 284 3.6E-38 T 12-10-2018 JDM601_2042 c1c77d3351e29bebe9f2fa0b3452cf46 314 SUPERFAMILY SSF51735 1 294 6.24E-42 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_2042 c1c77d3351e29bebe9f2fa0b3452cf46 314 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 222 8.9E-15 T 12-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 JDM601_3724 0dc3922882f16c99d94fdb11f37b0bfb 133 Pfam PF16525 Haemophore, haem-binding 41 116 2.2E-25 T 12-10-2018 IPR032407 Haemophore, haem-binding GO:0020037 JDM601_3724 0dc3922882f16c99d94fdb11f37b0bfb 133 TIGRFAM TIGR04529 MTB_hemophore: hemophore-related protein, Rv0203/Rv1174c family 42 116 4.2E-22 T 12-10-2018 IPR032407 Haemophore, haem-binding GO:0020037 JDM601_3724 0dc3922882f16c99d94fdb11f37b0bfb 133 Gene3D G3DSA:1.20.20.20 37 133 2.5E-26 T 12-10-2018 IPR038378 Haemophore, haem-binding domain superfamily JDM601_2211 82301b1b5bf0962f3cd360ee552688ac 1468 SMART SM00823 Phosphopantetheine attachment site 930 998 6.0E-5 T 12-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 JDM601_2211 82301b1b5bf0962f3cd360ee552688ac 1468 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 396 507 1.9E-17 T 12-10-2018 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 JDM601_2211 82301b1b5bf0962f3cd360ee552688ac 1468 Pfam PF00668 Condensation domain 1021 1438 1.0E-28 T 12-10-2018 IPR001242 Condensation domain JDM601_2211 82301b1b5bf0962f3cd360ee552688ac 1468 Gene3D G3DSA:1.10.1200.10 926 1000 1.9E-17 T 12-10-2018 IPR036736 ACP-like superfamily JDM601_2211 82301b1b5bf0962f3cd360ee552688ac 1468 SUPERFAMILY SSF52151 546 826 1.33E-67 T 12-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase JDM601_2211 82301b1b5bf0962f3cd360ee552688ac 1468 SUPERFAMILY SSF53901 8 441 2.03E-85 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 JDM601_2211 82301b1b5bf0962f3cd360ee552688ac 1468 Gene3D G3DSA:3.30.70.3290 460 893 1.6E-135 T 12-10-2018 JDM601_2211 82301b1b5bf0962f3cd360ee552688ac 1468 Gene3D G3DSA:3.30.559.10 1004 1177 2.1E-22 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 JDM601_2211 82301b1b5bf0962f3cd360ee552688ac 1468 SMART SM00825 Beta-ketoacyl synthase 12 445 7.6E-177 T 12-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain JDM601_2211 82301b1b5bf0962f3cd360ee552688ac 1468 SUPERFAMILY SSF52777 1199 1446 1.56E-24 T 12-10-2018 JDM601_2211 82301b1b5bf0962f3cd360ee552688ac 1468 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 11 266 3.7E-68 T 12-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal JDM601_2211 82301b1b5bf0962f3cd360ee552688ac 1468 Gene3D G3DSA:3.40.366.10 548 848 1.6E-135 T 12-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 JDM601_2211 82301b1b5bf0962f3cd360ee552688ac 1468 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 274 393 7.6E-42 T 12-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal JDM601_2211 82301b1b5bf0962f3cd360ee552688ac 1468 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 179 195 - T 12-10-2018 IPR018201 Beta-ketoacyl synthase, active site JDM601_2211 82301b1b5bf0962f3cd360ee552688ac 1468 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 550 842 2.9E-94 T 12-10-2018 IPR020801 Polyketide synthase, acyl transferase domain JDM601_2211 82301b1b5bf0962f3cd360ee552688ac 1468 Gene3D G3DSA:3.30.559.30 1181 1451 3.3E-43 T 12-10-2018 JDM601_2211 82301b1b5bf0962f3cd360ee552688ac 1468 SUPERFAMILY SSF47336 931 994 1.19E-14 T 12-10-2018 IPR036736 ACP-like superfamily JDM601_2211 82301b1b5bf0962f3cd360ee552688ac 1468 Gene3D G3DSA:3.40.47.10 8 445 8.7E-157 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 JDM601_2211 82301b1b5bf0962f3cd360ee552688ac 1468 SUPERFAMILY SSF55048 672 732 2.22E-9 T 12-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding JDM601_2211 82301b1b5bf0962f3cd360ee552688ac 1468 SUPERFAMILY SSF52777 1023 1190 5.45E-21 T 12-10-2018 JDM601_2211 82301b1b5bf0962f3cd360ee552688ac 1468 Pfam PF00698 Acyl transferase domain 548 863 3.2E-56 T 12-10-2018 IPR014043 Acyl transferase JDM601_2211 82301b1b5bf0962f3cd360ee552688ac 1468 Pfam PF00550 Phosphopantetheine attachment site 932 993 2.9E-11 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain JDM601_3860 ce1b9f9ddc80308852eaf208e7e1b686 671 Gene3D G3DSA:3.20.20.80 133 649 8.9E-114 T 12-10-2018 JDM601_3860 ce1b9f9ddc80308852eaf208e7e1b686 671 TIGRFAM TIGR00217 malQ: 4-alpha-glucanotransferase 122 643 1.2E-80 T 12-10-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 JDM601_3860 ce1b9f9ddc80308852eaf208e7e1b686 671 SUPERFAMILY SSF51445 136 647 1.27E-121 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily JDM601_3860 ce1b9f9ddc80308852eaf208e7e1b686 671 Pfam PF02446 4-alpha-glucanotransferase 141 633 1.5E-107 T 12-10-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 JDM601_1541 ff2fe2b46c21ae01ac2a8f9873a1c555 976 Gene3D G3DSA:3.40.366.10 100 397 2.4E-91 T 12-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 JDM601_1541 ff2fe2b46c21ae01ac2a8f9873a1c555 976 Gene3D G3DSA:3.30.70.3290 15 441 2.4E-91 T 12-10-2018 JDM601_1541 ff2fe2b46c21ae01ac2a8f9873a1c555 976 Gene3D G3DSA:3.40.50.720 443 883 1.1E-61 T 12-10-2018 JDM601_1541 ff2fe2b46c21ae01ac2a8f9873a1c555 976 SUPERFAMILY SSF55048 227 288 8.24E-10 T 12-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding JDM601_1541 ff2fe2b46c21ae01ac2a8f9873a1c555 976 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 638 815 3.0E-10 T 12-10-2018 JDM601_1541 ff2fe2b46c21ae01ac2a8f9873a1c555 976 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 102 394 1.7E-59 T 12-10-2018 IPR020801 Polyketide synthase, acyl transferase domain JDM601_1541 ff2fe2b46c21ae01ac2a8f9873a1c555 976 SMART SM00823 Phosphopantetheine attachment site 891 963 1.0E-6 T 12-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 JDM601_1541 ff2fe2b46c21ae01ac2a8f9873a1c555 976 Pfam PF00550 Phosphopantetheine attachment site 893 957 6.0E-6 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain JDM601_1541 ff2fe2b46c21ae01ac2a8f9873a1c555 976 SUPERFAMILY SSF47336 890 968 1.18E-11 T 12-10-2018 IPR036736 ACP-like superfamily JDM601_1541 ff2fe2b46c21ae01ac2a8f9873a1c555 976 ProSitePatterns PS00012 Phosphopantetheine attachment site. 918 933 - T 12-10-2018 IPR006162 Phosphopantetheine attachment site JDM601_1541 ff2fe2b46c21ae01ac2a8f9873a1c555 976 SUPERFAMILY SSF52151 98 387 1.28E-47 T 12-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase JDM601_1541 ff2fe2b46c21ae01ac2a8f9873a1c555 976 SUPERFAMILY SSF51735 460 627 6.3E-13 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_1541 ff2fe2b46c21ae01ac2a8f9873a1c555 976 Gene3D G3DSA:1.10.1200.10 888 972 7.7E-12 T 12-10-2018 IPR036736 ACP-like superfamily JDM601_1541 ff2fe2b46c21ae01ac2a8f9873a1c555 976 Pfam PF08659 KR domain 640 813 1.2E-33 T 12-10-2018 IPR013968 Polyketide synthase, ketoreductase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 JDM601_1541 ff2fe2b46c21ae01ac2a8f9873a1c555 976 SUPERFAMILY SSF51735 639 840 3.58E-28 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_1541 ff2fe2b46c21ae01ac2a8f9873a1c555 976 Pfam PF00698 Acyl transferase domain 101 377 4.1E-46 T 12-10-2018 IPR014043 Acyl transferase JDM601_1045 5af33f724f78be0dffc5002854d5de19 636 SUPERFAMILY SSF56281 8 507 1.22E-146 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like JDM601_1045 5af33f724f78be0dffc5002854d5de19 636 Pfam PF14863 Alkyl sulfatase dimerisation 369 505 5.5E-56 T 12-10-2018 IPR029228 Alkyl sulfatase dimerisation domain GO:0046983 JDM601_1045 5af33f724f78be0dffc5002854d5de19 636 Pfam PF00753 Metallo-beta-lactamase superfamily 105 330 1.4E-35 T 12-10-2018 IPR001279 Metallo-beta-lactamase JDM601_1045 5af33f724f78be0dffc5002854d5de19 636 SMART SM00849 108 330 1.7E-15 T 12-10-2018 IPR001279 Metallo-beta-lactamase JDM601_1045 5af33f724f78be0dffc5002854d5de19 636 Pfam PF14864 Alkyl sulfatase C-terminal 514 636 8.1E-40 T 12-10-2018 IPR029229 Alkyl sulfatase, C-terminal JDM601_1045 5af33f724f78be0dffc5002854d5de19 636 Gene3D G3DSA:3.30.1050.10 507 636 5.1E-44 T 12-10-2018 IPR036527 SCP2 sterol-binding domain superfamily JDM601_1045 5af33f724f78be0dffc5002854d5de19 636 Gene3D G3DSA:3.60.15.30 4 365 5.2E-160 T 12-10-2018 JDM601_1045 5af33f724f78be0dffc5002854d5de19 636 SUPERFAMILY SSF55718 515 636 1.27E-33 T 12-10-2018 IPR036527 SCP2 sterol-binding domain superfamily JDM601_1045 5af33f724f78be0dffc5002854d5de19 636 Gene3D G3DSA:1.25.40.880 366 506 7.5E-58 T 12-10-2018 IPR038536 Alkyl/aryl-sulfatase, dimerisation domain superfamily JDM601_1121 af21caef035aea5761ec467058cb9eea 269 Gene3D G3DSA:3.90.226.10 13 194 3.2E-58 T 12-10-2018 JDM601_1121 af21caef035aea5761ec467058cb9eea 269 SUPERFAMILY SSF52096 15 268 7.91E-70 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily JDM601_1121 af21caef035aea5761ec467058cb9eea 269 Gene3D G3DSA:1.10.12.10 213 268 1.8E-20 T 12-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal JDM601_1121 af21caef035aea5761ec467058cb9eea 269 Pfam PF00378 Enoyl-CoA hydratase/isomerase 23 268 1.4E-49 T 12-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 JDM601_2885 ff9ef849fe11fd8e2a159b0caba63eea 589 SUPERFAMILY SSF51905 51 505 8.2E-41 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_2885 ff9ef849fe11fd8e2a159b0caba63eea 589 Pfam PF13450 NAD(P)-binding Rossmann-like domain 53 107 1.1E-7 T 12-10-2018 JDM601_2885 ff9ef849fe11fd8e2a159b0caba63eea 589 Gene3D G3DSA:3.50.50.60 404 586 1.6E-27 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_2885 ff9ef849fe11fd8e2a159b0caba63eea 589 Gene3D G3DSA:3.50.50.60 44 326 1.0E-46 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_0263 188dc5d724bf983ca06f0d735f8b8411 215 Gene3D G3DSA:1.10.357.10 21 207 2.0E-17 T 12-10-2018 JDM601_0263 188dc5d724bf983ca06f0d735f8b8411 215 SUPERFAMILY SSF46689 23 91 5.64E-9 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JDM601_2457 7b9285576c3f187786763f18bb2500a1 114 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 111 50.652 T 12-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 JDM601_2457 7b9285576c3f187786763f18bb2500a1 114 Pfam PF03477 ATP cone domain 7 91 1.1E-14 T 12-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 JDM601_3125 469b7eb533a664632a9eedfc6805eeed 547 Pfam PF01266 FAD dependent oxidoreductase 1 347 2.4E-47 T 12-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 JDM601_3125 469b7eb533a664632a9eedfc6805eeed 547 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 376 498 1.4E-32 T 12-10-2018 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 JDM601_3125 469b7eb533a664632a9eedfc6805eeed 547 Gene3D G3DSA:1.10.8.870 386 527 2.3E-30 T 12-10-2018 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 JDM601_3125 469b7eb533a664632a9eedfc6805eeed 547 Gene3D G3DSA:3.30.9.10 77 319 7.7E-126 T 12-10-2018 JDM601_3125 469b7eb533a664632a9eedfc6805eeed 547 ProSitePatterns PS00978 FAD-dependent glycerol-3-phosphate dehydrogenase signature 2. 347 357 - T 12-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 JDM601_3125 469b7eb533a664632a9eedfc6805eeed 547 Gene3D G3DSA:3.50.50.60 1 361 7.7E-126 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_3125 469b7eb533a664632a9eedfc6805eeed 547 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 11 21 2.8E-26 T 12-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 JDM601_3125 469b7eb533a664632a9eedfc6805eeed 547 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 27 39 2.8E-26 T 12-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 JDM601_3125 469b7eb533a664632a9eedfc6805eeed 547 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 312 318 2.8E-26 T 12-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 JDM601_3125 469b7eb533a664632a9eedfc6805eeed 547 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 73 85 2.8E-26 T 12-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 JDM601_3125 469b7eb533a664632a9eedfc6805eeed 547 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 342 354 2.8E-26 T 12-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 JDM601_3125 469b7eb533a664632a9eedfc6805eeed 547 SUPERFAMILY SSF51905 1 323 1.3E-34 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_3125 469b7eb533a664632a9eedfc6805eeed 547 ProSitePatterns PS00977 FAD-dependent glycerol-3-phosphate dehydrogenase signature 1. 3 20 - T 12-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 JDM601_2152 162da194847e241f787dc92996ec5600 350 SUPERFAMILY SSF142754 33 341 4.97E-105 T 12-10-2018 IPR036094 Quinolinate synthetase A superfamily GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 JDM601_2152 162da194847e241f787dc92996ec5600 350 Pfam PF02445 Quinolinate synthetase A protein 37 340 3.9E-112 T 12-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 JDM601_2152 162da194847e241f787dc92996ec5600 350 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 32 342 1.4E-92 T 12-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 JDM601_2152 162da194847e241f787dc92996ec5600 350 Gene3D G3DSA:3.40.50.10800 201 298 2.8E-112 T 12-10-2018 JDM601_2152 162da194847e241f787dc92996ec5600 350 Gene3D G3DSA:3.40.50.10800 36 323 2.8E-112 T 12-10-2018 JDM601_2152 162da194847e241f787dc92996ec5600 350 Hamap MF_00568 Quinolinate synthase A [nadA]. 32 342 43.024 T 12-10-2018 IPR023066 Quinolinate synthase A, type 2 GO:0016765 MetaCyc: PWY-5316|MetaCyc: PWY-7342 JDM601_2152 162da194847e241f787dc92996ec5600 350 Gene3D G3DSA:3.40.50.10800 116 340 2.8E-112 T 12-10-2018 JDM601_1921 48de07b23a34bdc1cfc64749c13a5e78 133 Pfam PF01597 Glycine cleavage H-protein 11 132 1.7E-39 T 12-10-2018 IPR033753 Glycine cleavage system H-protein/Simiate JDM601_1921 48de07b23a34bdc1cfc64749c13a5e78 133 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 6 132 1.1E-46 T 12-10-2018 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 JDM601_1921 48de07b23a34bdc1cfc64749c13a5e78 133 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 8 132 36.354 T 12-10-2018 IPR002930 Glycine cleavage system H-protein GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 JDM601_1921 48de07b23a34bdc1cfc64749c13a5e78 133 Gene3D G3DSA:2.40.50.100 5 133 2.2E-47 T 12-10-2018 JDM601_1921 48de07b23a34bdc1cfc64749c13a5e78 133 SUPERFAMILY SSF51230 6 131 1.31E-36 T 12-10-2018 IPR011053 Single hybrid motif JDM601_0894 9fe81ae8e544870ed1e426400c2b2933 768 Gene3D G3DSA:3.40.50.300 16 291 3.1E-93 T 12-10-2018 JDM601_0894 9fe81ae8e544870ed1e426400c2b2933 768 SUPERFAMILY SSF52540 9 680 8.43E-171 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_0894 9fe81ae8e544870ed1e426400c2b2933 768 Gene3D G3DSA:3.40.50.300 298 671 2.6E-118 T 12-10-2018 JDM601_0894 9fe81ae8e544870ed1e426400c2b2933 768 Gene3D G3DSA:1.10.10.160 118 200 3.1E-93 T 12-10-2018 IPR013986 DExx box DNA helicase domain superfamily JDM601_0894 9fe81ae8e544870ed1e426400c2b2933 768 Pfam PF13361 UvrD-like helicase C-terminal domain 296 653 6.5E-66 T 12-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 JDM601_0894 9fe81ae8e544870ed1e426400c2b2933 768 Gene3D G3DSA:1.10.486.10 401 586 2.6E-118 T 12-10-2018 JDM601_0894 9fe81ae8e544870ed1e426400c2b2933 768 TIGRFAM TIGR01073 pcrA: ATP-dependent DNA helicase PcrA 12 765 3.5E-277 T 12-10-2018 IPR005751 ATP-dependent DNA helicase PcrA GO:0004003|GO:0005737|GO:0006268 JDM601_0894 9fe81ae8e544870ed1e426400c2b2933 768 Pfam PF00580 UvrD/REP helicase N-terminal domain 16 289 6.3E-71 T 12-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 JDM601_1498 0749fcc4210cd39c33830f6637f45323 386 Gene3D G3DSA:1.10.540.10 2 119 7.4E-23 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 JDM601_1498 0749fcc4210cd39c33830f6637f45323 386 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 232 383 1.1E-16 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 JDM601_1498 0749fcc4210cd39c33830f6637f45323 386 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 119 4.9E-18 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 JDM601_1498 0749fcc4210cd39c33830f6637f45323 386 Gene3D G3DSA:1.20.140.10 236 386 1.3E-31 T 12-10-2018 JDM601_1498 0749fcc4210cd39c33830f6637f45323 386 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 125 220 4.5E-20 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 JDM601_1498 0749fcc4210cd39c33830f6637f45323 386 Gene3D G3DSA:2.40.110.10 125 235 1.3E-36 T 12-10-2018 JDM601_1498 0749fcc4210cd39c33830f6637f45323 386 SUPERFAMILY SSF56645 3 245 4.84E-71 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 JDM601_1498 0749fcc4210cd39c33830f6637f45323 386 SUPERFAMILY SSF47203 232 386 9.02E-17 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 JDM601_2675 0facf04d8fe32779832afea9bf079b66 279 SUPERFAMILY SSF51430 9 271 1.83E-85 T 12-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily JDM601_2675 0facf04d8fe32779832afea9bf079b66 279 Gene3D G3DSA:3.20.20.100 2 279 8.8E-114 T 12-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily JDM601_2675 0facf04d8fe32779832afea9bf079b66 279 ProSitePatterns PS00063 Aldo/keto reductase family putative active site signature. 232 247 - T 12-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 JDM601_2675 0facf04d8fe32779832afea9bf079b66 279 PRINTS PR00069 Aldo-keto reductase signature 162 191 9.7E-46 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 JDM601_2675 0facf04d8fe32779832afea9bf079b66 279 PRINTS PR00069 Aldo-keto reductase signature 40 64 9.7E-46 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 JDM601_2675 0facf04d8fe32779832afea9bf079b66 279 PRINTS PR00069 Aldo-keto reductase signature 128 145 9.7E-46 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 JDM601_2675 0facf04d8fe32779832afea9bf079b66 279 PRINTS PR00069 Aldo-keto reductase signature 96 114 9.7E-46 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 JDM601_2675 0facf04d8fe32779832afea9bf079b66 279 PRINTS PR00069 Aldo-keto reductase signature 199 223 9.7E-46 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 JDM601_2675 0facf04d8fe32779832afea9bf079b66 279 Pfam PF00248 Aldo/keto reductase family 26 264 8.5E-44 T 12-10-2018 IPR023210 NADP-dependent oxidoreductase domain JDM601_2675 0facf04d8fe32779832afea9bf079b66 279 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 128 145 - T 12-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 JDM601_2675 0facf04d8fe32779832afea9bf079b66 279 PIRSF PIRSF000097 118 277 4.1E-40 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 JDM601_2675 0facf04d8fe32779832afea9bf079b66 279 PIRSF PIRSF000097 5 120 2.4E-35 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 JDM601_2417 e839acdb085e0e11be7b3dacaede989e 261 Pfam PF01872 RibD C-terminal domain 40 251 1.6E-40 T 12-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 JDM601_2417 e839acdb085e0e11be7b3dacaede989e 261 SUPERFAMILY SSF53597 38 256 1.5E-38 T 12-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 JDM601_2417 e839acdb085e0e11be7b3dacaede989e 261 Gene3D G3DSA:3.40.430.10 4 258 8.3E-71 T 12-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 JDM601_4027 8b7297e8419cce4d1da24eefc0c43bd5 156 Pfam PF00293 NUDIX domain 20 147 2.7E-10 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 JDM601_4027 8b7297e8419cce4d1da24eefc0c43bd5 156 Gene3D G3DSA:3.90.79.10 2 153 5.5E-17 T 12-10-2018 JDM601_4027 8b7297e8419cce4d1da24eefc0c43bd5 156 SUPERFAMILY SSF55811 5 149 4.47E-17 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 JDM601_2952 677e464fa3de18037d6a9f2230d12ecd 471 SMART SM00387 356 467 6.2E-36 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JDM601_2952 677e464fa3de18037d6a9f2230d12ecd 471 SMART SM00388 234 314 3.7E-11 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JDM601_2952 677e464fa3de18037d6a9f2230d12ecd 471 Gene3D G3DSA:1.20.1480.50 128 223 4.5E-7 T 12-10-2018 JDM601_2952 677e464fa3de18037d6a9f2230d12ecd 471 SMART SM00304 166 219 1.2E-8 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JDM601_2952 677e464fa3de18037d6a9f2230d12ecd 471 SUPERFAMILY SSF158472 166 216 7.72E-6 T 12-10-2018 JDM601_2952 677e464fa3de18037d6a9f2230d12ecd 471 Gene3D G3DSA:3.30.565.10 341 469 8.6E-35 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JDM601_2952 677e464fa3de18037d6a9f2230d12ecd 471 Pfam PF00512 His Kinase A (phospho-acceptor) domain 236 314 1.7E-12 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JDM601_2952 677e464fa3de18037d6a9f2230d12ecd 471 Pfam PF00672 HAMP domain 166 215 8.5E-9 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JDM601_2952 677e464fa3de18037d6a9f2230d12ecd 471 SUPERFAMILY SSF47384 222 314 4.71E-12 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 JDM601_2952 677e464fa3de18037d6a9f2230d12ecd 471 SUPERFAMILY SSF55874 304 465 5.24E-38 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JDM601_2952 677e464fa3de18037d6a9f2230d12ecd 471 Gene3D G3DSA:1.10.287.130 224 315 9.4E-14 T 12-10-2018 JDM601_2952 677e464fa3de18037d6a9f2230d12ecd 471 PRINTS PR00344 Bacterial sensor protein C-terminal signature 411 421 1.8E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JDM601_2952 677e464fa3de18037d6a9f2230d12ecd 471 PRINTS PR00344 Bacterial sensor protein C-terminal signature 393 407 1.8E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JDM601_2952 677e464fa3de18037d6a9f2230d12ecd 471 PRINTS PR00344 Bacterial sensor protein C-terminal signature 428 446 1.8E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JDM601_2952 677e464fa3de18037d6a9f2230d12ecd 471 PRINTS PR00344 Bacterial sensor protein C-terminal signature 451 464 1.8E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JDM601_2952 677e464fa3de18037d6a9f2230d12ecd 471 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 357 466 6.5E-21 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JDM601_2490 cc24d163a9453e5afb454215f6dace15 191 SUPERFAMILY SSF53335 15 135 4.06E-15 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JDM601_2490 cc24d163a9453e5afb454215f6dace15 191 Gene3D G3DSA:3.40.50.150 3 169 2.0E-15 T 12-10-2018 JDM601_2490 cc24d163a9453e5afb454215f6dace15 191 Pfam PF08241 Methyltransferase domain 19 119 3.9E-9 T 12-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 JDM601_0481 ff2acb7f4f738e4952981eefbdfa28ef 1798 Gene3D G3DSA:3.40.47.10 1506 1649 7.8E-28 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 JDM601_0481 ff2acb7f4f738e4952981eefbdfa28ef 1798 Gene3D G3DSA:3.40.47.10 1120 1311 1.1E-48 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 JDM601_0481 ff2acb7f4f738e4952981eefbdfa28ef 1798 SUPERFAMILY SSF53901 1125 1465 1.76E-34 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 JDM601_0481 ff2acb7f4f738e4952981eefbdfa28ef 1798 SUPERFAMILY SSF47336 1005 1074 8.77E-15 T 12-10-2018 IPR036736 ACP-like superfamily JDM601_0481 ff2acb7f4f738e4952981eefbdfa28ef 1798 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 522 926 3.3E-127 T 12-10-2018 IPR010071 Amino acid adenylation domain JDM601_0481 ff2acb7f4f738e4952981eefbdfa28ef 1798 Gene3D G3DSA:3.30.559.10 40 409 2.7E-139 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 JDM601_0481 ff2acb7f4f738e4952981eefbdfa28ef 1798 SUPERFAMILY SSF52777 40 209 3.45E-42 T 12-10-2018 JDM601_0481 ff2acb7f4f738e4952981eefbdfa28ef 1798 Gene3D G3DSA:3.40.50.12780 492 894 2.4E-134 T 12-10-2018 JDM601_0481 ff2acb7f4f738e4952981eefbdfa28ef 1798 Pfam PF13193 AMP-binding enzyme C-terminal domain 910 984 6.8E-11 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain JDM601_0481 ff2acb7f4f738e4952981eefbdfa28ef 1798 Gene3D G3DSA:1.10.1200.10 1000 1077 7.1E-21 T 12-10-2018 IPR036736 ACP-like superfamily JDM601_0481 ff2acb7f4f738e4952981eefbdfa28ef 1798 Gene3D G3DSA:3.30.300.30 896 998 8.6E-30 T 12-10-2018 JDM601_0481 ff2acb7f4f738e4952981eefbdfa28ef 1798 SUPERFAMILY SSF56801 459 1025 1.26E-156 T 12-10-2018 JDM601_0481 ff2acb7f4f738e4952981eefbdfa28ef 1798 Pfam PF00501 AMP-binding enzyme 503 901 6.3E-92 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 JDM601_0481 ff2acb7f4f738e4952981eefbdfa28ef 1798 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 1239 1323 3.1E-13 T 12-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 JDM601_0481 ff2acb7f4f738e4952981eefbdfa28ef 1798 Gene3D G3DSA:3.40.47.10 1324 1464 9.0E-18 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 JDM601_0481 ff2acb7f4f738e4952981eefbdfa28ef 1798 ProSitePatterns PS00455 Putative AMP-binding domain signature. 645 656 - T 12-10-2018 IPR020845 AMP-binding, conserved site JDM601_0481 ff2acb7f4f738e4952981eefbdfa28ef 1798 Gene3D G3DSA:3.30.559.30 213 466 2.7E-139 T 12-10-2018 JDM601_0481 ff2acb7f4f738e4952981eefbdfa28ef 1798 SUPERFAMILY SSF53901 1501 1797 2.7E-18 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 JDM601_0481 ff2acb7f4f738e4952981eefbdfa28ef 1798 Pfam PF00668 Condensation domain 37 480 2.7E-97 T 12-10-2018 IPR001242 Condensation domain JDM601_0481 ff2acb7f4f738e4952981eefbdfa28ef 1798 SUPERFAMILY SSF52777 218 464 1.78E-61 T 12-10-2018 JDM601_0481 ff2acb7f4f738e4952981eefbdfa28ef 1798 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 1710 1797 5.6E-6 T 12-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 JDM601_0481 ff2acb7f4f738e4952981eefbdfa28ef 1798 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 1370 1463 5.6E-9 T 12-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 JDM601_0481 ff2acb7f4f738e4952981eefbdfa28ef 1798 Gene3D G3DSA:3.40.47.10 1659 1798 1.2E-12 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 JDM601_0481 ff2acb7f4f738e4952981eefbdfa28ef 1798 Pfam PF00550 Phosphopantetheine attachment site 1014 1074 4.9E-7 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain JDM601_1999 49bd658752d986a1cae5134f71972b91 237 Gene3D G3DSA:3.40.50.1110 45 232 1.1E-19 T 12-10-2018 IPR036514 SGNH hydrolase superfamily JDM601_1999 49bd658752d986a1cae5134f71972b91 237 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 49 219 5.2E-16 T 12-10-2018 IPR013830 SGNH hydrolase-type esterase domain JDM601_1999 49bd658752d986a1cae5134f71972b91 237 SUPERFAMILY SSF52266 43 232 1.67E-26 T 12-10-2018 JDM601_1331 8ffc1fdab5f4f29ca3f477563462a589 479 SUPERFAMILY SSF55486 48 207 3.11E-7 T 12-10-2018 JDM601_1331 8ffc1fdab5f4f29ca3f477563462a589 479 Pfam PF04228 Putative neutral zinc metallopeptidase 148 259 8.6E-7 T 12-10-2018 IPR007343 Uncharacterised protein family, zinc metallopeptidase putative JDM601_3897 ef451d16c530ec5c2c04a3a340a04fd5 282 Pfam PF00809 Pterin binding enzyme 10 255 2.1E-81 T 12-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 JDM601_3897 ef451d16c530ec5c2c04a3a340a04fd5 282 Gene3D G3DSA:3.20.20.20 2 277 8.2E-100 T 12-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 JDM601_3897 ef451d16c530ec5c2c04a3a340a04fd5 282 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 8 23 - T 12-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 JDM601_3897 ef451d16c530ec5c2c04a3a340a04fd5 282 SUPERFAMILY SSF51717 7 270 4.45E-88 T 12-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 JDM601_3897 ef451d16c530ec5c2c04a3a340a04fd5 282 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 42 55 - T 12-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 JDM601_3897 ef451d16c530ec5c2c04a3a340a04fd5 282 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 7 269 1.6E-89 T 12-10-2018 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 JDM601_1901 28f84feba6bac7c9fafc1bdc6ea26ed8 610 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 354 486 1.6E-17 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 JDM601_1901 28f84feba6bac7c9fafc1bdc6ea26ed8 610 TIGRFAM TIGR03922 T7SS_EccA: type VII secretion AAA-ATPase EccA 42 593 2.4E-233 T 12-10-2018 IPR023835 Type VII secretion system AAA-ATPase, EccA JDM601_1901 28f84feba6bac7c9fafc1bdc6ea26ed8 610 Gene3D G3DSA:3.40.50.300 311 485 5.6E-26 T 12-10-2018 JDM601_1901 28f84feba6bac7c9fafc1bdc6ea26ed8 610 SUPERFAMILY SSF52540 316 583 4.55E-28 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_1901 28f84feba6bac7c9fafc1bdc6ea26ed8 610 Gene3D G3DSA:1.25.40.10 25 295 7.4E-72 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JDM601_1901 28f84feba6bac7c9fafc1bdc6ea26ed8 610 PRINTS PR00819 CbxX/CfqX superfamily signature 390 404 1.0E-33 T 12-10-2018 IPR000641 CbxX/CfqX GO:0005524 JDM601_1901 28f84feba6bac7c9fafc1bdc6ea26ed8 610 PRINTS PR00819 CbxX/CfqX superfamily signature 458 475 1.0E-33 T 12-10-2018 IPR000641 CbxX/CfqX GO:0005524 JDM601_1901 28f84feba6bac7c9fafc1bdc6ea26ed8 610 PRINTS PR00819 CbxX/CfqX superfamily signature 352 367 1.0E-33 T 12-10-2018 IPR000641 CbxX/CfqX GO:0005524 JDM601_1901 28f84feba6bac7c9fafc1bdc6ea26ed8 610 PRINTS PR00819 CbxX/CfqX superfamily signature 475 494 1.0E-33 T 12-10-2018 IPR000641 CbxX/CfqX GO:0005524 JDM601_1901 28f84feba6bac7c9fafc1bdc6ea26ed8 610 PRINTS PR00819 CbxX/CfqX superfamily signature 312 326 1.0E-33 T 12-10-2018 IPR000641 CbxX/CfqX GO:0005524 JDM601_1901 28f84feba6bac7c9fafc1bdc6ea26ed8 610 PRINTS PR00819 CbxX/CfqX superfamily signature 437 449 1.0E-33 T 12-10-2018 IPR000641 CbxX/CfqX GO:0005524 JDM601_1901 28f84feba6bac7c9fafc1bdc6ea26ed8 610 PRINTS PR00819 CbxX/CfqX superfamily signature 404 423 1.0E-33 T 12-10-2018 IPR000641 CbxX/CfqX GO:0005524 JDM601_1901 28f84feba6bac7c9fafc1bdc6ea26ed8 610 PRINTS PR00819 CbxX/CfqX superfamily signature 545 557 1.0E-33 T 12-10-2018 IPR000641 CbxX/CfqX GO:0005524 JDM601_1901 28f84feba6bac7c9fafc1bdc6ea26ed8 610 SUPERFAMILY SSF48452 34 256 1.03E-10 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JDM601_1901 28f84feba6bac7c9fafc1bdc6ea26ed8 610 Gene3D G3DSA:1.10.8.60 488 582 4.6E-5 T 12-10-2018 JDM601_1901 28f84feba6bac7c9fafc1bdc6ea26ed8 610 SMART SM00382 349 490 6.1E-5 T 12-10-2018 IPR003593 AAA+ ATPase domain JDM601_1778 16a190f5c0ac0a56b7694beb3c329b90 286 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 141 162 - T 12-10-2018 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17 JDM601_1778 16a190f5c0ac0a56b7694beb3c329b90 286 TIGRFAM TIGR03455 HisG_C-term: ATP phosphoribosyltransferase, C-terminal domain 192 285 1.9E-27 T 12-10-2018 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 JDM601_1778 16a190f5c0ac0a56b7694beb3c329b90 286 Gene3D G3DSA:3.40.190.10 2 183 6.4E-62 T 12-10-2018 JDM601_1778 16a190f5c0ac0a56b7694beb3c329b90 286 Hamap MF_00079 ATP phosphoribosyltransferase [hisG]. 1 286 31.908 T 12-10-2018 IPR020621 ATP phosphoribosyltransferase HisG, long form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17 JDM601_1778 16a190f5c0ac0a56b7694beb3c329b90 286 Gene3D G3DSA:3.40.190.10 91 178 6.4E-62 T 12-10-2018 JDM601_1778 16a190f5c0ac0a56b7694beb3c329b90 286 SUPERFAMILY SSF54913 214 285 6.78E-21 T 12-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta JDM601_1778 16a190f5c0ac0a56b7694beb3c329b90 286 Pfam PF08029 HisG, C-terminal domain 212 281 3.1E-25 T 12-10-2018 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 JDM601_1778 16a190f5c0ac0a56b7694beb3c329b90 286 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 2 182 2.1E-52 T 12-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 JDM601_1778 16a190f5c0ac0a56b7694beb3c329b90 286 SUPERFAMILY SSF53850 1 209 2.25E-59 T 12-10-2018 JDM601_1778 16a190f5c0ac0a56b7694beb3c329b90 286 Pfam PF01634 ATP phosphoribosyltransferase 49 190 1.2E-40 T 12-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 JDM601_1778 16a190f5c0ac0a56b7694beb3c329b90 286 Gene3D G3DSA:3.30.70.120 214 280 2.7E-29 T 12-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal JDM601_3702 d6b30f8ccbb6cf32c3c104e164c5a9a5 301 Pfam PF00106 short chain dehydrogenase 7 212 8.3E-39 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3702 d6b30f8ccbb6cf32c3c104e164c5a9a5 301 SUPERFAMILY SSF51735 4 259 2.35E-59 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_3702 d6b30f8ccbb6cf32c3c104e164c5a9a5 301 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 171 190 1.8E-9 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3702 d6b30f8ccbb6cf32c3c104e164c5a9a5 301 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 92 103 1.8E-9 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3702 d6b30f8ccbb6cf32c3c104e164c5a9a5 301 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 159 1.8E-9 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3702 d6b30f8ccbb6cf32c3c104e164c5a9a5 301 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 158 186 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 JDM601_3702 d6b30f8ccbb6cf32c3c104e164c5a9a5 301 Gene3D G3DSA:3.40.50.720 3 301 9.0E-86 T 12-10-2018 JDM601_3702 d6b30f8ccbb6cf32c3c104e164c5a9a5 301 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 202 4.1E-5 T 12-10-2018 JDM601_3702 d6b30f8ccbb6cf32c3c104e164c5a9a5 301 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 192 209 3.3E-22 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3702 d6b30f8ccbb6cf32c3c104e164c5a9a5 301 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 190 3.3E-22 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3702 d6b30f8ccbb6cf32c3c104e164c5a9a5 301 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 92 103 3.3E-22 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3702 d6b30f8ccbb6cf32c3c104e164c5a9a5 301 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 145 161 3.3E-22 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3702 d6b30f8ccbb6cf32c3c104e164c5a9a5 301 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 3.3E-22 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0440 080c7402aaee07e0cac093dc75095c44 506 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 240 247 - T 12-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 JDM601_0440 080c7402aaee07e0cac093dc75095c44 506 Pfam PF00171 Aldehyde dehydrogenase family 15 464 2.3E-131 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 JDM601_0440 080c7402aaee07e0cac093dc75095c44 506 PIRSF PIRSF036492 22 504 6.3E-96 T 12-10-2018 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent GO:0006081|GO:0055114 JDM601_0440 080c7402aaee07e0cac093dc75095c44 506 Gene3D G3DSA:3.40.605.10 15 461 1.3E-142 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 JDM601_0440 080c7402aaee07e0cac093dc75095c44 506 SUPERFAMILY SSF53720 12 466 8.38E-136 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 JDM601_0440 080c7402aaee07e0cac093dc75095c44 506 Gene3D G3DSA:3.40.309.10 244 430 1.3E-142 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 JDM601_0224 1b16e7e5a17bcf07ae39c07e7d46e9db 280 Gene3D G3DSA:3.10.129.10 26 280 1.2E-81 T 12-10-2018 JDM601_0224 1b16e7e5a17bcf07ae39c07e7d46e9db 280 SUPERFAMILY SSF54637 168 276 7.46E-19 T 12-10-2018 IPR029069 HotDog domain superfamily JDM601_0224 1b16e7e5a17bcf07ae39c07e7d46e9db 280 PRINTS PR01483 Fatty acid synthase signature 200 221 6.0E-8 T 12-10-2018 IPR003965 Fatty acid synthase GO:0004312|GO:0005835|GO:0006633|GO:0055114 JDM601_0224 1b16e7e5a17bcf07ae39c07e7d46e9db 280 PRINTS PR01483 Fatty acid synthase signature 178 200 6.0E-8 T 12-10-2018 IPR003965 Fatty acid synthase GO:0004312|GO:0005835|GO:0006633|GO:0055114 JDM601_0224 1b16e7e5a17bcf07ae39c07e7d46e9db 280 Pfam PF01575 MaoC like domain 174 243 1.1E-17 T 12-10-2018 IPR002539 MaoC-like dehydratase domain JDM601_0224 1b16e7e5a17bcf07ae39c07e7d46e9db 280 SUPERFAMILY SSF54637 37 159 1.42E-9 T 12-10-2018 IPR029069 HotDog domain superfamily JDM601_0696 23c717d137aefb4631f103f1232e3d98 700 SUPERFAMILY SSF54980 609 695 2.78E-30 T 12-10-2018 IPR035647 EF-G domain III/V-like JDM601_0696 23c717d137aefb4631f103f1232e3d98 700 Gene3D G3DSA:3.30.70.870 409 486 4.7E-32 T 12-10-2018 JDM601_0696 23c717d137aefb4631f103f1232e3d98 700 SMART SM00838 606 693 2.9E-58 T 12-10-2018 IPR000640 Elongation factor EFG, domain V-like JDM601_0696 23c717d137aefb4631f103f1232e3d98 700 SMART SM00889 483 604 5.4E-70 T 12-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 JDM601_0696 23c717d137aefb4631f103f1232e3d98 700 Pfam PF03764 Elongation factor G, domain IV 482 604 1.8E-46 T 12-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 JDM601_0696 23c717d137aefb4631f103f1232e3d98 700 Hamap MF_00054_B Elongation factor G [fusA]. 8 697 111.734 T 12-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 JDM601_0696 23c717d137aefb4631f103f1232e3d98 700 TIGRFAM TIGR00484 EF-G: translation elongation factor G 7 697 0.0 T 12-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 JDM601_0696 23c717d137aefb4631f103f1232e3d98 700 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 53 68 - T 12-10-2018 IPR031157 Tr-type G domain, conserved site JDM601_0696 23c717d137aefb4631f103f1232e3d98 700 Gene3D G3DSA:2.40.30.10 295 408 1.2E-43 T 12-10-2018 JDM601_0696 23c717d137aefb4631f103f1232e3d98 700 Pfam PF00679 Elongation factor G C-terminus 606 692 4.6E-31 T 12-10-2018 IPR000640 Elongation factor EFG, domain V-like JDM601_0696 23c717d137aefb4631f103f1232e3d98 700 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 12 182 2.7E-38 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 JDM601_0696 23c717d137aefb4631f103f1232e3d98 700 Gene3D G3DSA:3.30.70.240 610 680 1.1E-88 T 12-10-2018 JDM601_0696 23c717d137aefb4631f103f1232e3d98 700 SUPERFAMILY SSF54980 407 484 7.55E-25 T 12-10-2018 IPR035647 EF-G domain III/V-like JDM601_0696 23c717d137aefb4631f103f1232e3d98 700 Gene3D G3DSA:3.30.230.10 487 693 1.1E-88 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup JDM601_0696 23c717d137aefb4631f103f1232e3d98 700 PRINTS PR00315 GTP-binding elongation factor signature 60 68 1.9E-16 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JDM601_0696 23c717d137aefb4631f103f1232e3d98 700 PRINTS PR00315 GTP-binding elongation factor signature 132 141 1.9E-16 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JDM601_0696 23c717d137aefb4631f103f1232e3d98 700 PRINTS PR00315 GTP-binding elongation factor signature 80 90 1.9E-16 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JDM601_0696 23c717d137aefb4631f103f1232e3d98 700 PRINTS PR00315 GTP-binding elongation factor signature 14 27 1.9E-16 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JDM601_0696 23c717d137aefb4631f103f1232e3d98 700 PRINTS PR00315 GTP-binding elongation factor signature 96 107 1.9E-16 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JDM601_0696 23c717d137aefb4631f103f1232e3d98 700 SUPERFAMILY SSF50447 267 407 3.03E-34 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily JDM601_0696 23c717d137aefb4631f103f1232e3d98 700 Pfam PF14492 Elongation Factor G, domain II 407 481 7.2E-34 T 12-10-2018 JDM601_0696 23c717d137aefb4631f103f1232e3d98 700 SUPERFAMILY SSF52540 8 284 4.83E-108 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_0696 23c717d137aefb4631f103f1232e3d98 700 Pfam PF00009 Elongation factor Tu GTP binding domain 11 284 2.4E-68 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JDM601_0696 23c717d137aefb4631f103f1232e3d98 700 SUPERFAMILY SSF54211 482 605 2.12E-39 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold JDM601_0696 23c717d137aefb4631f103f1232e3d98 700 Gene3D G3DSA:3.40.50.300 5 294 1.5E-112 T 12-10-2018 JDM601_0696 23c717d137aefb4631f103f1232e3d98 700 Pfam PF03144 Elongation factor Tu domain 2 327 394 1.0E-13 T 12-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 JDM601_3580 23e9650e22aa8a472757b9e5689832ad 715 Gene3D G3DSA:2.130.10.120 79 433 1.4E-258 T 12-10-2018 JDM601_3580 23e9650e22aa8a472757b9e5689832ad 715 SUPERFAMILY SSF53474 442 693 1.39E-40 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_3580 23e9650e22aa8a472757b9e5689832ad 715 Pfam PF00326 Prolyl oligopeptidase family 488 703 1.6E-61 T 12-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 JDM601_3580 23e9650e22aa8a472757b9e5689832ad 715 Gene3D G3DSA:3.40.50.1820 30 700 1.4E-258 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_3580 23e9650e22aa8a472757b9e5689832ad 715 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 473 491 3.1E-54 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 JDM601_3580 23e9650e22aa8a472757b9e5689832ad 715 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 634 656 3.1E-54 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 JDM601_3580 23e9650e22aa8a472757b9e5689832ad 715 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 499 523 3.1E-54 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 JDM601_3580 23e9650e22aa8a472757b9e5689832ad 715 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 557 577 3.1E-54 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 JDM601_3580 23e9650e22aa8a472757b9e5689832ad 715 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 616 631 3.1E-54 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 JDM601_3580 23e9650e22aa8a472757b9e5689832ad 715 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 527 546 3.1E-54 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 JDM601_3580 23e9650e22aa8a472757b9e5689832ad 715 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 12 432 4.6E-109 T 12-10-2018 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 JDM601_3580 23e9650e22aa8a472757b9e5689832ad 715 SUPERFAMILY SSF50993 8 438 2.3E-92 T 12-10-2018 JDM601_0070 eec0f260d6871f82f65e4d2fe9ec6f02 372 Gene3D G3DSA:3.20.20.70 1 367 3.4E-88 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JDM601_0070 eec0f260d6871f82f65e4d2fe9ec6f02 372 SUPERFAMILY SSF51412 2 364 2.14E-45 T 12-10-2018 JDM601_0070 eec0f260d6871f82f65e4d2fe9ec6f02 372 Pfam PF03060 Nitronate monooxygenase 23 356 2.4E-46 T 12-10-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 JDM601_1786 c3c524830b61c7fb47ab1071da837cd8 610 Gene3D G3DSA:2.40.50.140 97 156 9.0E-31 T 12-10-2018 JDM601_1786 c3c524830b61c7fb47ab1071da837cd8 610 SUPERFAMILY SSF52540 248 554 6.09E-49 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_1786 c3c524830b61c7fb47ab1071da837cd8 610 Gene3D G3DSA:2.40.50.140 157 248 1.9E-43 T 12-10-2018 JDM601_1786 c3c524830b61c7fb47ab1071da837cd8 610 Pfam PF16450 Proteasomal ATPase OB/ID domain 100 247 9.5E-54 T 12-10-2018 IPR032501 Proteasomal ATPase, OB/ID domain JDM601_1786 c3c524830b61c7fb47ab1071da837cd8 610 Hamap MF_02112 Proteasome-associated ATPase [mpa]. 58 589 50.538 T 12-10-2018 IPR022482 Proteasome ATPase GO:0000502|GO:0010498|GO:0016887|GO:0019941 JDM601_1786 c3c524830b61c7fb47ab1071da837cd8 610 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 290 440 4.2E-48 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 JDM601_1786 c3c524830b61c7fb47ab1071da837cd8 610 Gene3D G3DSA:1.10.8.60 441 489 1.2E-61 T 12-10-2018 JDM601_1786 c3c524830b61c7fb47ab1071da837cd8 610 ProSitePatterns PS00674 AAA-protein family signature. 410 428 - T 12-10-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 JDM601_1786 c3c524830b61c7fb47ab1071da837cd8 610 SMART SM00382 286 442 7.4E-22 T 12-10-2018 IPR003593 AAA+ ATPase domain JDM601_1786 c3c524830b61c7fb47ab1071da837cd8 610 Gene3D G3DSA:1.20.5.170 53 96 3.5E-27 T 12-10-2018 JDM601_1786 c3c524830b61c7fb47ab1071da837cd8 610 TIGRFAM TIGR03689 pup_AAA: proteasome ATPase 56 588 1.5E-262 T 12-10-2018 IPR022482 Proteasome ATPase GO:0000502|GO:0010498|GO:0016887|GO:0019941 JDM601_1786 c3c524830b61c7fb47ab1071da837cd8 610 Gene3D G3DSA:3.40.50.300 249 440 1.2E-61 T 12-10-2018 JDM601_1169 44c17d53cfdf07831ee333abfd6050aa 300 Pfam PF04227 Indigoidine synthase A like protein 6 296 3.4E-117 T 12-10-2018 IPR007342 Pseudouridine-5'-phosphate glycosidase GO:0016798 KEGG: 00240+4.2.1.70|MetaCyc: PWY-6019 JDM601_1169 44c17d53cfdf07831ee333abfd6050aa 300 Hamap MF_01876 Pseudouridine-5'-phosphate glycosidase [psuG]. 5 299 40.126 T 12-10-2018 IPR007342 Pseudouridine-5'-phosphate glycosidase GO:0016798 KEGG: 00240+4.2.1.70|MetaCyc: PWY-6019 JDM601_1169 44c17d53cfdf07831ee333abfd6050aa 300 Gene3D G3DSA:3.40.1790.10 1 300 9.4E-117 T 12-10-2018 IPR022830 Indigoidine synthase A-like GO:0016798 KEGG: 00240+4.2.1.70|MetaCyc: PWY-6019 JDM601_1169 44c17d53cfdf07831ee333abfd6050aa 300 SUPERFAMILY SSF110581 2 297 1.02E-101 T 12-10-2018 IPR022830 Indigoidine synthase A-like GO:0016798 KEGG: 00240+4.2.1.70|MetaCyc: PWY-6019 JDM601_2688 6810a678260a6bb6ba42c22d0e35ea39 310 ProSitePatterns PS00893 Nudix box signature. 50 71 - T 12-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 JDM601_2688 6810a678260a6bb6ba42c22d0e35ea39 310 Gene3D G3DSA:3.40.50.1240 148 307 1.7E-29 T 12-10-2018 IPR029033 Histidine phosphatase superfamily JDM601_2688 6810a678260a6bb6ba42c22d0e35ea39 310 PRINTS PR00502 NUDIX hydrolase family signature 45 59 9.3E-5 T 12-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 JDM601_2688 6810a678260a6bb6ba42c22d0e35ea39 310 PRINTS PR00502 NUDIX hydrolase family signature 59 74 9.3E-5 T 12-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 JDM601_2688 6810a678260a6bb6ba42c22d0e35ea39 310 Pfam PF00293 NUDIX domain 19 139 7.8E-18 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 JDM601_2688 6810a678260a6bb6ba42c22d0e35ea39 310 SMART SM00855 148 262 5.7E-10 T 12-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 JDM601_2688 6810a678260a6bb6ba42c22d0e35ea39 310 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 149 235 8.5E-13 T 12-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 JDM601_2688 6810a678260a6bb6ba42c22d0e35ea39 310 SUPERFAMILY SSF55811 7 141 1.35E-31 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 JDM601_2688 6810a678260a6bb6ba42c22d0e35ea39 310 Gene3D G3DSA:3.90.79.10 15 147 7.1E-37 T 12-10-2018 JDM601_2688 6810a678260a6bb6ba42c22d0e35ea39 310 SUPERFAMILY SSF53254 146 294 3.85E-20 T 12-10-2018 IPR029033 Histidine phosphatase superfamily JDM601_3515 afad62b438ce30e42bdf091e86de7944 366 SUPERFAMILY SSF56645 2 239 2.88E-64 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 JDM601_3515 afad62b438ce30e42bdf091e86de7944 366 SUPERFAMILY SSF47203 226 364 4.76E-13 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 JDM601_3515 afad62b438ce30e42bdf091e86de7944 366 Gene3D G3DSA:1.20.140.10 231 366 3.8E-16 T 12-10-2018 JDM601_3515 afad62b438ce30e42bdf091e86de7944 366 Gene3D G3DSA:1.10.540.10 2 114 1.1E-20 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 JDM601_3515 afad62b438ce30e42bdf091e86de7944 366 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 119 212 3.2E-20 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 JDM601_3515 afad62b438ce30e42bdf091e86de7944 366 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 226 362 8.9E-10 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 JDM601_3515 afad62b438ce30e42bdf091e86de7944 366 Gene3D G3DSA:2.40.110.10 119 230 1.1E-36 T 12-10-2018 JDM601_3515 afad62b438ce30e42bdf091e86de7944 366 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 7 114 3.0E-16 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 JDM601_0418 6ac4020b99423fbf91ce975b0800e21b 732 SMART SM00382 505 642 7.9E-19 T 12-10-2018 IPR003593 AAA+ ATPase domain JDM601_0418 6ac4020b99423fbf91ce975b0800e21b 732 SMART SM00382 254 380 2.2E-4 T 12-10-2018 IPR003593 AAA+ ATPase domain JDM601_0418 6ac4020b99423fbf91ce975b0800e21b 732 SMART SM01072 122 212 4.4E-4 T 12-10-2018 IPR004201 CDC48, domain 2 JDM601_0418 6ac4020b99423fbf91ce975b0800e21b 732 ProSitePatterns PS00674 AAA-protein family signature. 610 628 - T 12-10-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 JDM601_0418 6ac4020b99423fbf91ce975b0800e21b 732 SUPERFAMILY SSF52540 468 726 2.05E-62 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_0418 6ac4020b99423fbf91ce975b0800e21b 732 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 509 637 1.0E-38 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 JDM601_0418 6ac4020b99423fbf91ce975b0800e21b 732 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 258 377 5.5E-13 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 JDM601_0418 6ac4020b99423fbf91ce975b0800e21b 732 Gene3D G3DSA:2.40.40.20 21 104 8.5E-7 T 12-10-2018 JDM601_0418 6ac4020b99423fbf91ce975b0800e21b 732 Gene3D G3DSA:3.40.50.300 469 726 1.3E-83 T 12-10-2018 JDM601_0418 6ac4020b99423fbf91ce975b0800e21b 732 SUPERFAMILY SSF52540 220 455 1.8E-29 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_0418 6ac4020b99423fbf91ce975b0800e21b 732 Pfam PF02359 Cell division protein 48 (CDC48), N-terminal domain 32 104 1.5E-11 T 12-10-2018 IPR003338 CDC48, N-terminal subdomain JDM601_0418 6ac4020b99423fbf91ce975b0800e21b 732 Gene3D G3DSA:3.40.50.300 213 379 5.5E-21 T 12-10-2018 JDM601_0418 6ac4020b99423fbf91ce975b0800e21b 732 SMART SM01073 21 105 1.5E-14 T 12-10-2018 IPR003338 CDC48, N-terminal subdomain JDM601_0418 6ac4020b99423fbf91ce975b0800e21b 732 Gene3D G3DSA:1.10.8.60 641 713 1.3E-83 T 12-10-2018 JDM601_0418 6ac4020b99423fbf91ce975b0800e21b 732 Gene3D G3DSA:1.10.8.60 380 465 3.4E-14 T 12-10-2018 JDM601_0418 6ac4020b99423fbf91ce975b0800e21b 732 SUPERFAMILY SSF50692 32 103 5.47E-10 T 12-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily JDM601_0413 741515a4dc8ca43609040c4f250d654c 465 Gene3D G3DSA:3.40.309.10 235 429 7.9E-157 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 JDM601_0413 741515a4dc8ca43609040c4f250d654c 465 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 260 271 - T 12-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 JDM601_0413 741515a4dc8ca43609040c4f250d654c 465 SUPERFAMILY SSF53720 6 463 5.89E-143 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 JDM601_0413 741515a4dc8ca43609040c4f250d654c 465 Gene3D G3DSA:3.40.605.10 7 458 7.9E-157 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 JDM601_0413 741515a4dc8ca43609040c4f250d654c 465 Pfam PF00171 Aldehyde dehydrogenase family 8 460 1.2E-147 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 JDM601_3098 dd4877b2a84dc541973dee42d467ce1e 370 SUPERFAMILY SSF51604 118 368 5.63E-52 T 12-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily JDM601_3098 dd4877b2a84dc541973dee42d467ce1e 370 SMART SM00922 149 244 9.9E-20 T 12-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal JDM601_3098 dd4877b2a84dc541973dee42d467ce1e 370 ProSitePatterns PS00909 Mandelate racemase / muconate lactonizing enzyme family signature 2. 194 225 - T 12-10-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 JDM601_3098 dd4877b2a84dc541973dee42d467ce1e 370 Pfam PF13378 Enolase C-terminal domain-like 158 361 1.1E-50 T 12-10-2018 IPR029065 Enolase C-terminal domain-like JDM601_3098 dd4877b2a84dc541973dee42d467ce1e 370 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 35 128 7.2E-9 T 12-10-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain JDM601_3098 dd4877b2a84dc541973dee42d467ce1e 370 SUPERFAMILY SSF54826 11 129 3.54E-26 T 12-10-2018 JDM601_3098 dd4877b2a84dc541973dee42d467ce1e 370 Gene3D G3DSA:3.30.390.10 21 121 4.5E-112 T 12-10-2018 IPR029017 Enolase-like, N-terminal JDM601_3098 dd4877b2a84dc541973dee42d467ce1e 370 Gene3D G3DSA:3.20.20.120 122 358 4.5E-112 T 12-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily JDM601_1915 aa263b60af1701ab01f429f7eae5dac0 644 Pfam PF06472 ABC transporter transmembrane region 2 43 370 2.4E-85 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 JDM601_1915 aa263b60af1701ab01f429f7eae5dac0 644 SMART SM00382 464 634 2.8E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain JDM601_1915 aa263b60af1701ab01f429f7eae5dac0 644 Pfam PF00005 ABC transporter 458 591 1.0E-13 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JDM601_1915 aa263b60af1701ab01f429f7eae5dac0 644 SUPERFAMILY SSF52540 433 633 5.23E-32 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_1915 aa263b60af1701ab01f429f7eae5dac0 644 ProSitePatterns PS00211 ABC transporters family signature. 563 577 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JDM601_1915 aa263b60af1701ab01f429f7eae5dac0 644 SUPERFAMILY SSF90123 226 418 4.84E-11 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JDM601_1915 aa263b60af1701ab01f429f7eae5dac0 644 Gene3D G3DSA:3.40.50.300 430 640 6.7E-34 T 12-10-2018 JDM601_0718 16d291bdf4ba55ebe327b98a4368bfc5 384 SUPERFAMILY SSF53901 7 223 1.2E-35 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 JDM601_0718 16d291bdf4ba55ebe327b98a4368bfc5 384 PIRSF PIRSF000429 2 384 6.8E-42 T 12-10-2018 IPR002155 Thiolase GO:0016747 JDM601_0718 16d291bdf4ba55ebe327b98a4368bfc5 384 Pfam PF02803 Thiolase, C-terminal domain 256 356 1.2E-9 T 12-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 JDM601_0718 16d291bdf4ba55ebe327b98a4368bfc5 384 SUPERFAMILY SSF53901 257 361 1.2E-24 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 JDM601_0718 16d291bdf4ba55ebe327b98a4368bfc5 384 Gene3D G3DSA:3.40.47.10 7 383 4.6E-93 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 JDM601_0718 16d291bdf4ba55ebe327b98a4368bfc5 384 Pfam PF00108 Thiolase, N-terminal domain 8 176 6.5E-14 T 12-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 JDM601_1613 bbf21db192e7c04131096923851d367c 212 SUPERFAMILY SSF53474 20 211 1.3E-30 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_1613 bbf21db192e7c04131096923851d367c 212 Pfam PF01083 Cutinase 27 212 1.9E-48 T 12-10-2018 IPR000675 Cutinase/acetylxylan esterase GO:0016787 JDM601_1613 bbf21db192e7c04131096923851d367c 212 ProSitePatterns PS00155 Cutinase, serine active site. 96 108 - T 12-10-2018 IPR011150 Cutinase, monofunctional GO:0005576|GO:0050525 JDM601_1613 bbf21db192e7c04131096923851d367c 212 SMART SM01110 26 212 6.5E-83 T 12-10-2018 IPR000675 Cutinase/acetylxylan esterase GO:0016787 JDM601_1613 bbf21db192e7c04131096923851d367c 212 Gene3D G3DSA:3.40.50.1820 3 212 9.9E-43 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_1832 bff46a38fca81f53a597663a4dc2ca09 289 PRINTS PR00474 Glutamate 5-kinase family signature 55 69 2.4E-10 T 12-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 JDM601_1832 bff46a38fca81f53a597663a4dc2ca09 289 PRINTS PR00474 Glutamate 5-kinase family signature 238 258 2.4E-10 T 12-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 JDM601_1832 bff46a38fca81f53a597663a4dc2ca09 289 PRINTS PR00474 Glutamate 5-kinase family signature 187 214 2.4E-10 T 12-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 JDM601_1832 bff46a38fca81f53a597663a4dc2ca09 289 Gene3D G3DSA:3.40.1160.10 2 289 3.2E-104 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily JDM601_1832 bff46a38fca81f53a597663a4dc2ca09 289 PIRSF PIRSF000728 9 288 1.0E-99 T 12-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 JDM601_1832 bff46a38fca81f53a597663a4dc2ca09 289 TIGRFAM TIGR00761 argB: acetylglutamate kinase 26 263 7.9E-83 T 12-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 JDM601_1832 bff46a38fca81f53a597663a4dc2ca09 289 Pfam PF00696 Amino acid kinase family 24 265 6.7E-49 T 12-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 JDM601_1832 bff46a38fca81f53a597663a4dc2ca09 289 Hamap MF_00082 Acetylglutamate kinase [argB]. 23 281 46.999 T 12-10-2018 IPR037528 Acetylglutamate kinase ArgB GO:0003991|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 JDM601_1832 bff46a38fca81f53a597663a4dc2ca09 289 SUPERFAMILY SSF53633 3 288 3.01E-86 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily JDM601_2476 5b7b5dce256f6bc56a30bba15ce56af7 484 SMART SM00729 150 374 5.7E-59 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 JDM601_2476 5b7b5dce256f6bc56a30bba15ce56af7 484 SUPERFAMILY SSF102114 135 380 1.44E-58 T 12-10-2018 JDM601_2476 5b7b5dce256f6bc56a30bba15ce56af7 484 Pfam PF04055 Radical SAM superfamily 154 331 2.6E-30 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 JDM601_2476 5b7b5dce256f6bc56a30bba15ce56af7 484 Gene3D G3DSA:3.80.30.20 148 388 1.4E-86 T 12-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe JDM601_2476 5b7b5dce256f6bc56a30bba15ce56af7 484 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 9 446 3.6E-141 T 12-10-2018 JDM601_2476 5b7b5dce256f6bc56a30bba15ce56af7 484 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 154 174 - T 12-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 JDM601_2476 5b7b5dce256f6bc56a30bba15ce56af7 484 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 7 453 67.294 T 12-10-2018 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 JDM601_2476 5b7b5dce256f6bc56a30bba15ce56af7 484 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 8 448 6.8E-149 T 12-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 JDM601_2476 5b7b5dce256f6bc56a30bba15ce56af7 484 Gene3D G3DSA:3.40.50.12160 8 138 4.6E-33 T 12-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily JDM601_2476 5b7b5dce256f6bc56a30bba15ce56af7 484 Pfam PF00919 Uncharacterized protein family UPF0004 9 107 3.4E-28 T 12-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 JDM601_1355 2f49e8b8449f71d8b969d2834c8b4cf8 75 Gene3D G3DSA:1.10.260.40 1 60 5.1E-13 T 12-10-2018 JDM601_1355 2f49e8b8449f71d8b969d2834c8b4cf8 75 SMART SM00530 4 58 4.0E-4 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 JDM601_1355 2f49e8b8449f71d8b969d2834c8b4cf8 75 SUPERFAMILY SSF47413 2 67 6.57E-13 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 JDM601_1355 2f49e8b8449f71d8b969d2834c8b4cf8 75 Pfam PF13744 Helix-turn-helix domain 1 59 6.0E-9 T 12-10-2018 IPR039554 HigA2-like, helix-turn-helix domain JDM601_1620 74b0274957a35b50931bde34dd081b91 370 SUPERFAMILY SSF51445 44 350 5.54E-51 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily JDM601_1620 74b0274957a35b50931bde34dd081b91 370 Gene3D G3DSA:3.20.20.80 41 337 1.2E-31 T 12-10-2018 JDM601_1620 74b0274957a35b50931bde34dd081b91 370 Pfam PF00150 Cellulase (glycosyl hydrolase family 5) 83 278 1.6E-6 T 12-10-2018 IPR001547 Glycoside hydrolase, family 5 GO:0004553|GO:0005975 JDM601_4038 75821acb10bab492cb528ad6e007a7f5 213 SUPERFAMILY SSF53254 2 194 3.43E-34 T 12-10-2018 IPR029033 Histidine phosphatase superfamily JDM601_4038 75821acb10bab492cb528ad6e007a7f5 213 Gene3D G3DSA:3.40.50.1240 1 188 3.6E-34 T 12-10-2018 IPR029033 Histidine phosphatase superfamily JDM601_4038 75821acb10bab492cb528ad6e007a7f5 213 SMART SM00855 2 150 1.1E-13 T 12-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 JDM601_4038 75821acb10bab492cb528ad6e007a7f5 213 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 184 2.2E-33 T 12-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 JDM601_1735 42f76665a09e3568fb6f857f85bac061 335 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 9 324 35.797 T 12-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 JDM601_1735 42f76665a09e3568fb6f857f85bac061 335 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 7 323 1.4E-85 T 12-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 JDM601_1735 42f76665a09e3568fb6f857f85bac061 335 SUPERFAMILY SSF81799 128 229 9.29E-34 T 12-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 JDM601_1735 42f76665a09e3568fb6f857f85bac061 335 Pfam PF01795 MraW methylase family 7 323 3.0E-111 T 12-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 JDM601_1735 42f76665a09e3568fb6f857f85bac061 335 SUPERFAMILY SSF53335 9 324 2.76E-39 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JDM601_1735 42f76665a09e3568fb6f857f85bac061 335 Gene3D G3DSA:3.40.50.150 9 320 6.7E-92 T 12-10-2018 JDM601_1735 42f76665a09e3568fb6f857f85bac061 335 PIRSF PIRSF004486 4 325 1.6E-95 T 12-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 JDM601_1735 42f76665a09e3568fb6f857f85bac061 335 Gene3D G3DSA:1.10.150.170 126 231 6.7E-92 T 12-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 JDM601_1968 b5a2268cfbfc34e831712050b4f2d80b 686 PRINTS PR01036 Tetracycline resistance protein TetB signature 212 230 1.3E-5 T 12-10-2018 JDM601_1968 b5a2268cfbfc34e831712050b4f2d80b 686 PRINTS PR01036 Tetracycline resistance protein TetB signature 411 430 1.3E-5 T 12-10-2018 JDM601_1968 b5a2268cfbfc34e831712050b4f2d80b 686 PRINTS PR01036 Tetracycline resistance protein TetB signature 117 137 1.3E-5 T 12-10-2018 JDM601_1968 b5a2268cfbfc34e831712050b4f2d80b 686 PRINTS PR01036 Tetracycline resistance protein TetB signature 369 389 1.3E-5 T 12-10-2018 JDM601_1968 b5a2268cfbfc34e831712050b4f2d80b 686 PRINTS PR01036 Tetracycline resistance protein TetB signature 147 171 1.3E-5 T 12-10-2018 JDM601_1968 b5a2268cfbfc34e831712050b4f2d80b 686 Gene3D G3DSA:1.20.1720.10 24 227 1.5E-48 T 12-10-2018 JDM601_1968 b5a2268cfbfc34e831712050b4f2d80b 686 SUPERFAMILY SSF103473 10 498 1.31E-64 T 12-10-2018 IPR036259 MFS transporter superfamily JDM601_1968 b5a2268cfbfc34e831712050b4f2d80b 686 ProSitePatterns PS00217 Sugar transport proteins signature 2. 119 144 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 JDM601_1968 b5a2268cfbfc34e831712050b4f2d80b 686 Pfam PF07690 Major Facilitator Superfamily 29 421 3.6E-45 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 JDM601_1204 53edd4233fe0ce5abb80f21eadf44b6b 209 Pfam PF13828 Domain of unknown function (DUF4190) 143 202 1.6E-14 T 12-10-2018 IPR025241 Domain of unknown function DUF4190 JDM601_1204 53edd4233fe0ce5abb80f21eadf44b6b 209 PRINTS PR01217 Proline rich extensin signature 44 56 3.3E-9 T 12-10-2018 JDM601_1204 53edd4233fe0ce5abb80f21eadf44b6b 209 PRINTS PR01217 Proline rich extensin signature 63 84 3.3E-9 T 12-10-2018 JDM601_1204 53edd4233fe0ce5abb80f21eadf44b6b 209 PRINTS PR01217 Proline rich extensin signature 14 30 3.3E-9 T 12-10-2018 JDM601_1204 53edd4233fe0ce5abb80f21eadf44b6b 209 PRINTS PR01217 Proline rich extensin signature 102 119 3.3E-9 T 12-10-2018 JDM601_1204 53edd4233fe0ce5abb80f21eadf44b6b 209 PRINTS PR01217 Proline rich extensin signature 84 100 3.3E-9 T 12-10-2018 JDM601_3152 f778f3fd855da2df9a45ff75673c9521 400 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 115 126 1.9E-7 T 12-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 JDM601_3152 f778f3fd855da2df9a45ff75673c9521 400 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 163 180 1.9E-7 T 12-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 JDM601_3152 f778f3fd855da2df9a45ff75673c9521 400 SUPERFAMILY SSF56601 87 325 2.11E-56 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like JDM601_3152 f778f3fd855da2df9a45ff75673c9521 400 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 84 304 3.3E-36 T 12-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 JDM601_3152 f778f3fd855da2df9a45ff75673c9521 400 Gene3D G3DSA:3.40.710.10 54 355 3.8E-89 T 12-10-2018 JDM601_3949 a9c2ddb496adf474e26d79457b3ba145 397 Gene3D G3DSA:2.40.10.10 187 276 4.3E-21 T 12-10-2018 JDM601_3949 a9c2ddb496adf474e26d79457b3ba145 397 Pfam PF13365 Trypsin-like peptidase domain 219 355 2.0E-23 T 12-10-2018 JDM601_3949 a9c2ddb496adf474e26d79457b3ba145 397 PRINTS PR00834 HtrA/DegQ protease family signature 227 239 2.6E-7 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 JDM601_3949 a9c2ddb496adf474e26d79457b3ba145 397 PRINTS PR00834 HtrA/DegQ protease family signature 348 365 2.6E-7 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 JDM601_3949 a9c2ddb496adf474e26d79457b3ba145 397 PRINTS PR00834 HtrA/DegQ protease family signature 247 267 2.6E-7 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 JDM601_3949 a9c2ddb496adf474e26d79457b3ba145 397 PRINTS PR00834 HtrA/DegQ protease family signature 326 343 2.6E-7 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 JDM601_3949 a9c2ddb496adf474e26d79457b3ba145 397 Pfam PF02674 Colicin V production protein 7 148 1.1E-14 T 12-10-2018 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 JDM601_3949 a9c2ddb496adf474e26d79457b3ba145 397 SUPERFAMILY SSF50494 193 379 5.87E-35 T 12-10-2018 IPR009003 Peptidase S1, PA clan JDM601_3949 a9c2ddb496adf474e26d79457b3ba145 397 Gene3D G3DSA:2.40.10.10 279 383 2.8E-19 T 12-10-2018 JDM601_2832 f962b0c59a48a4857d4e511cdba7ae13 209 Pfam PF00092 von Willebrand factor type A domain 2 154 1.0E-12 T 12-10-2018 IPR002035 von Willebrand factor, type A JDM601_2832 f962b0c59a48a4857d4e511cdba7ae13 209 SMART SM00327 1 174 1.2E-9 T 12-10-2018 IPR002035 von Willebrand factor, type A JDM601_2832 f962b0c59a48a4857d4e511cdba7ae13 209 Gene3D G3DSA:3.40.50.410 1 159 1.8E-22 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily JDM601_2832 f962b0c59a48a4857d4e511cdba7ae13 209 PIRSF PIRSF020634 1 199 8.3E-46 T 12-10-2018 IPR011392 Tellurite resistance, TerY JDM601_2832 f962b0c59a48a4857d4e511cdba7ae13 209 SUPERFAMILY SSF53300 2 153 6.53E-22 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily JDM601_1273 1e96de7cec46b973bb903cdcbb986850 871 SUPERFAMILY SSF52540 1 861 1.71E-18 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_1273 1e96de7cec46b973bb903cdcbb986850 871 Gene3D G3DSA:3.40.50.300 1 141 7.3E-14 T 12-10-2018 JDM601_1273 1e96de7cec46b973bb903cdcbb986850 871 Gene3D G3DSA:3.40.50.300 594 868 1.4E-15 T 12-10-2018 JDM601_1273 1e96de7cec46b973bb903cdcbb986850 871 Pfam PF13175 AAA ATPase domain 1 62 5.7E-10 T 12-10-2018 JDM601_3347 48e472ed19794fd5acf4168d1a5c6427 397 Gene3D G3DSA:3.20.20.70 9 381 4.2E-110 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JDM601_3347 48e472ed19794fd5acf4168d1a5c6427 397 PIRSF PIRSF000138 7 383 2.1E-104 T 12-10-2018 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent GO:0010181|GO:0016491|GO:0055114 Reactome: R-HSA-9033241 JDM601_3347 48e472ed19794fd5acf4168d1a5c6427 397 Pfam PF01070 FMN-dependent dehydrogenase 17 378 1.8E-109 T 12-10-2018 IPR000262 FMN-dependent dehydrogenase GO:0016491 Reactome: R-HSA-9033241 JDM601_3347 48e472ed19794fd5acf4168d1a5c6427 397 TIGRFAM TIGR03966 actino_HemFlav: heme/flavin dehydrogenase, mycofactocin system 5 387 3.0E-215 T 12-10-2018 IPR023989 Heme/flavin dehydrogenase, Rv0694 JDM601_3347 48e472ed19794fd5acf4168d1a5c6427 397 SUPERFAMILY SSF51395 14 379 1.4E-81 T 12-10-2018 JDM601_2159 2ea14548c65bd39ad2b1f3a16713e4bb 410 SUPERFAMILY SSF53098 169 316 6.83E-20 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily JDM601_2159 2ea14548c65bd39ad2b1f3a16713e4bb 410 Pfam PF00665 Integrase core domain 171 274 8.2E-12 T 12-10-2018 IPR001584 Integrase, catalytic core GO:0015074 JDM601_2159 2ea14548c65bd39ad2b1f3a16713e4bb 410 Gene3D G3DSA:3.30.420.10 174 314 8.0E-9 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 JDM601_1701 1ee86e6a4fe43590b9550bf157c6fbf8 656 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 31 572 1.0E-137 T 12-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 JDM601_1701 1ee86e6a4fe43590b9550bf157c6fbf8 656 SUPERFAMILY SSF56235 1 245 2.4E-57 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal JDM601_1701 1ee86e6a4fe43590b9550bf157c6fbf8 656 Gene3D G3DSA:3.60.20.10 19 201 2.2E-56 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal JDM601_1701 1ee86e6a4fe43590b9550bf157c6fbf8 656 SUPERFAMILY SSF52402 255 631 1.15E-82 T 12-10-2018 JDM601_1701 1ee86e6a4fe43590b9550bf157c6fbf8 656 Pfam PF13537 Glutamine amidotransferase domain 60 182 8.7E-39 T 12-10-2018 IPR017932 Glutamine amidotransferase type 2 domain JDM601_1701 1ee86e6a4fe43590b9550bf157c6fbf8 656 Pfam PF00733 Asparagine synthase 266 635 6.7E-107 T 12-10-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 JDM601_1701 1ee86e6a4fe43590b9550bf157c6fbf8 656 PIRSF PIRSF001589 1 650 1.6E-164 T 12-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 JDM601_0695 2ce969e74b7419233cc990b59183ddfe 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 156 8.1E-68 T 12-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 JDM601_0695 2ce969e74b7419233cc990b59183ddfe 156 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 5.8E-62 T 12-10-2018 IPR023798 Ribosomal protein S7 domain JDM601_0695 2ce969e74b7419233cc990b59183ddfe 156 Gene3D G3DSA:1.10.455.10 2 156 2.7E-58 T 12-10-2018 IPR036823 Ribosomal protein S7 domain superfamily JDM601_0695 2ce969e74b7419233cc990b59183ddfe 156 PIRSF PIRSF002122 4 156 3.8E-57 T 12-10-2018 IPR000235 Ribosomal protein S5/S7 GO:0006412 JDM601_0695 2ce969e74b7419233cc990b59183ddfe 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 12-10-2018 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JDM601_0695 2ce969e74b7419233cc990b59183ddfe 156 SUPERFAMILY SSF47973 1 149 1.19E-58 T 12-10-2018 IPR036823 Ribosomal protein S7 domain superfamily JDM601_0695 2ce969e74b7419233cc990b59183ddfe 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 35.683 T 12-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 JDM601_3481 4d8d02032c9d9a8b8b9b147b4d59b512 286 Gene3D G3DSA:3.40.50.720 1 280 2.2E-71 T 12-10-2018 JDM601_3481 4d8d02032c9d9a8b8b9b147b4d59b512 286 TIGRFAM TIGR03971 SDR_subfam_1: SDR family mycofactocin-dependent oxidoreductase 4 278 1.2E-104 T 12-10-2018 IPR023985 Mycofactocin-dependent oxidoreductase JDM601_3481 4d8d02032c9d9a8b8b9b147b4d59b512 286 SUPERFAMILY SSF51735 3 280 1.33E-55 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_3481 4d8d02032c9d9a8b8b9b147b4d59b512 286 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 276 1.9E-36 T 12-10-2018 JDM601_3481 4d8d02032c9d9a8b8b9b147b4d59b512 286 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 191 4.0E-21 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3481 4d8d02032c9d9a8b8b9b147b4d59b512 286 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 241 261 4.0E-21 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3481 4d8d02032c9d9a8b8b9b147b4d59b512 286 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 193 210 4.0E-21 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3481 4d8d02032c9d9a8b8b9b147b4d59b512 286 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 4.0E-21 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3481 4d8d02032c9d9a8b8b9b147b4d59b512 286 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 94 105 4.0E-21 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3481 4d8d02032c9d9a8b8b9b147b4d59b512 286 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 137 153 4.0E-21 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0406 72ffa64b6a4eae8f12bdb3e510051738 217 ProSitePatterns PS00332 Copper/Zinc superoxide dismutase signature 2. 203 214 - T 12-10-2018 IPR018152 Superoxide dismutase, copper/zinc, binding site GO:0004784|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 JDM601_0406 72ffa64b6a4eae8f12bdb3e510051738 217 SUPERFAMILY SSF49329 47 215 2.09E-42 T 12-10-2018 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 JDM601_0406 72ffa64b6a4eae8f12bdb3e510051738 217 Gene3D G3DSA:2.60.40.200 44 216 5.6E-46 T 12-10-2018 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 JDM601_0406 72ffa64b6a4eae8f12bdb3e510051738 217 Pfam PF00080 Copper/zinc superoxide dismutase (SODC) 57 214 9.1E-30 T 12-10-2018 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 JDM601_2587 5de5790c2d6a41c6ef12216f215711a4 283 Pfam PF13312 Domain of unknown function (DUF4081) 53 155 4.4E-40 T 12-10-2018 IPR025289 Domain of unknown function DUF4081 JDM601_2587 5de5790c2d6a41c6ef12216f215711a4 283 SUPERFAMILY SSF55729 135 277 3.84E-16 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase JDM601_2587 5de5790c2d6a41c6ef12216f215711a4 283 Gene3D G3DSA:3.40.630.30 67 282 1.7E-19 T 12-10-2018 JDM601_2587 5de5790c2d6a41c6ef12216f215711a4 283 Pfam PF08445 FR47-like protein 213 274 3.3E-8 T 12-10-2018 IPR013653 FR47-like GO:0016747 JDM601_2587 5de5790c2d6a41c6ef12216f215711a4 283 PIRSF PIRSF021603 1 282 6.2E-130 T 12-10-2018 IPR016794 Uncharacterised conserved protein UCP21603, acetyltransferase-like JDM601_3892 b0964c6c63dd24b14b50acd956874108 300 Gene3D G3DSA:3.40.50.720 10 176 2.7E-33 T 12-10-2018 JDM601_3892 b0964c6c63dd24b14b50acd956874108 300 Pfam PF10727 Rossmann-like domain 8 128 7.6E-57 T 12-10-2018 IPR019665 Putative oxidoreductase/dehydrogenase, Rossmann-like domain JDM601_3892 b0964c6c63dd24b14b50acd956874108 300 Gene3D G3DSA:1.10.1040.20 178 287 7.6E-11 T 12-10-2018 IPR037108 TM1727-like, C-terminal domain superfamily JDM601_3892 b0964c6c63dd24b14b50acd956874108 300 Pfam PF10728 Domain of unknown function (DUF2520) 146 283 1.8E-37 T 12-10-2018 IPR018931 Domain of unknown function DUF2520 JDM601_3892 b0964c6c63dd24b14b50acd956874108 300 SUPERFAMILY SSF48179 179 289 1.5E-18 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 JDM601_3892 b0964c6c63dd24b14b50acd956874108 300 SUPERFAMILY SSF51735 13 176 6.48E-22 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_1995 1f220ffcb9a3bc3aa5926977e5709333 173 Pfam PF01569 PAP2 superfamily 70 169 4.1E-10 T 12-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase JDM601_1995 1f220ffcb9a3bc3aa5926977e5709333 173 SUPERFAMILY SSF48317 2 169 3.27E-15 T 12-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily JDM601_1995 1f220ffcb9a3bc3aa5926977e5709333 173 Gene3D G3DSA:1.20.144.10 91 173 2.1E-10 T 12-10-2018 JDM601_2052 734b60a5ca45ec9dd06236e4ebb9300c 76 SUPERFAMILY SSF143120 2 39 1.96E-7 T 12-10-2018 IPR036165 YefM-like superfamily JDM601_2052 734b60a5ca45ec9dd06236e4ebb9300c 76 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 1 39 2.9E-8 T 12-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM JDM601_2052 734b60a5ca45ec9dd06236e4ebb9300c 76 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 1 34 1.9E-8 T 12-10-2018 JDM601_2052 734b60a5ca45ec9dd06236e4ebb9300c 76 Gene3D G3DSA:3.40.1620.10 1 37 3.0E-5 T 12-10-2018 JDM601_0122 b299b6fc8a1329e0212b01ce338f62a3 404 Pfam PF02470 MlaD protein 44 123 1.3E-14 T 12-10-2018 IPR003399 Mce/MlaD JDM601_0122 b299b6fc8a1329e0212b01ce338f62a3 404 TIGRFAM TIGR00996 Mtu_fam_mce: virulence factor Mce family protein 14 304 2.7E-71 T 12-10-2018 IPR005693 Virulence factor Mce protein JDM601_0122 b299b6fc8a1329e0212b01ce338f62a3 404 Pfam PF11887 Cholesterol uptake porter CUP1 of Mce4, putative 152 404 5.6E-95 T 12-10-2018 IPR024516 Mammalian cell entry, C-terminal JDM601_1548 4b6e636acfbeeab8990bcecee4045cac 470 Gene3D G3DSA:3.40.640.10 58 323 7.5E-105 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 JDM601_1548 4b6e636acfbeeab8990bcecee4045cac 470 Gene3D G3DSA:3.90.1150.10 20 400 7.5E-105 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 JDM601_1548 4b6e636acfbeeab8990bcecee4045cac 470 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 13 354 2.4E-22 T 12-10-2018 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 JDM601_1548 4b6e636acfbeeab8990bcecee4045cac 470 SUPERFAMILY SSF53383 13 420 2.27E-97 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase JDM601_2601 47ffde219fdb60b6f0a55c02080c1f8a 113 Pfam PF12840 Helix-turn-helix domain 15 72 1.4E-10 T 12-10-2018 JDM601_2601 47ffde219fdb60b6f0a55c02080c1f8a 113 SMART SM00418 15 93 2.0E-26 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 JDM601_2601 47ffde219fdb60b6f0a55c02080c1f8a 113 SUPERFAMILY SSF46785 7 91 5.38E-22 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JDM601_2601 47ffde219fdb60b6f0a55c02080c1f8a 113 Gene3D G3DSA:1.10.10.10 5 102 2.0E-24 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JDM601_2601 47ffde219fdb60b6f0a55c02080c1f8a 113 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 64 79 1.6E-9 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 JDM601_2601 47ffde219fdb60b6f0a55c02080c1f8a 113 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 17 32 1.6E-9 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 JDM601_2601 47ffde219fdb60b6f0a55c02080c1f8a 113 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 49 64 1.6E-9 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 JDM601_2578 acb09e26154be7b480a5f38483e30953 258 SUPERFAMILY SSF51735 10 251 1.2E-80 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_2578 acb09e26154be7b480a5f38483e30953 258 Gene3D G3DSA:3.40.50.720 6 258 2.6E-89 T 12-10-2018 JDM601_2578 acb09e26154be7b480a5f38483e30953 258 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 17 251 1.1E-69 T 12-10-2018 JDM601_2578 acb09e26154be7b480a5f38483e30953 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 1.8E-9 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2578 acb09e26154be7b480a5f38483e30953 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 1.8E-9 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2578 acb09e26154be7b480a5f38483e30953 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 1.8E-9 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2578 acb09e26154be7b480a5f38483e30953 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 3.9E-45 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2578 acb09e26154be7b480a5f38483e30953 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 3.9E-45 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2578 acb09e26154be7b480a5f38483e30953 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 12 29 3.9E-45 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2578 acb09e26154be7b480a5f38483e30953 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 3.9E-45 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2578 acb09e26154be7b480a5f38483e30953 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 3.9E-45 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2578 acb09e26154be7b480a5f38483e30953 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 3.9E-45 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_1893 688087468f694b388921d23cf0c44d6f 1399 Gene3D G3DSA:3.40.50.300 434 735 1.2E-70 T 12-10-2018 JDM601_1893 688087468f694b388921d23cf0c44d6f 1399 Gene3D G3DSA:3.40.50.300 1141 1384 1.7E-42 T 12-10-2018 JDM601_1893 688087468f694b388921d23cf0c44d6f 1399 SUPERFAMILY SSF52540 463 675 3.68E-24 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_1893 688087468f694b388921d23cf0c44d6f 1399 TIGRFAM TIGR03924 T7SS_EccC_a: type VII secretion protein EccCa 25 719 1.2E-205 T 12-10-2018 IPR023836 EccCa-like, Actinobacteria JDM601_1893 688087468f694b388921d23cf0c44d6f 1399 SMART SM00382 1168 1368 0.49 T 12-10-2018 IPR003593 AAA+ ATPase domain JDM601_1893 688087468f694b388921d23cf0c44d6f 1399 SMART SM00382 493 676 0.28 T 12-10-2018 IPR003593 AAA+ ATPase domain JDM601_1893 688087468f694b388921d23cf0c44d6f 1399 SMART SM00382 866 1066 0.13 T 12-10-2018 IPR003593 AAA+ ATPase domain JDM601_1893 688087468f694b388921d23cf0c44d6f 1399 Pfam PF01580 FtsK/SpoIIIE family 822 1094 2.2E-69 T 12-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 JDM601_1893 688087468f694b388921d23cf0c44d6f 1399 Pfam PF01580 FtsK/SpoIIIE family 457 673 2.0E-21 T 12-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 JDM601_1893 688087468f694b388921d23cf0c44d6f 1399 SUPERFAMILY SSF52540 807 1058 8.91E-17 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_1893 688087468f694b388921d23cf0c44d6f 1399 TIGRFAM TIGR03925 T7SS_EccC_b: type VII secretion protein EccCb 792 1380 2.8E-163 T 12-10-2018 IPR023837 EccCb-like, Actinobacteria JDM601_1893 688087468f694b388921d23cf0c44d6f 1399 SUPERFAMILY SSF52540 1124 1314 2.79E-7 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_1893 688087468f694b388921d23cf0c44d6f 1399 Gene3D G3DSA:3.40.50.300 231 340 1.8E-10 T 12-10-2018 JDM601_1893 688087468f694b388921d23cf0c44d6f 1399 Gene3D G3DSA:3.40.50.300 805 1126 6.8E-63 T 12-10-2018 JDM601_0654 fbc4ee5850c3042bf57ae0ebe881a34c 352 SUPERFAMILY SSF52151 15 337 3.92E-37 T 12-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase JDM601_0654 fbc4ee5850c3042bf57ae0ebe881a34c 352 Gene3D G3DSA:3.40.1090.10 2 113 9.9E-11 T 12-10-2018 JDM601_0654 fbc4ee5850c3042bf57ae0ebe881a34c 352 Gene3D G3DSA:3.40.1090.10 114 232 5.5E-18 T 12-10-2018 JDM601_0654 fbc4ee5850c3042bf57ae0ebe881a34c 352 Pfam PF01734 Patatin-like phospholipase 16 221 6.1E-27 T 12-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 JDM601_3670 96d969d08fe0bea3c9d0b8f2094cecb1 381 Pfam PF13469 Sulfotransferase family 90 338 1.0E-58 T 12-10-2018 JDM601_3670 96d969d08fe0bea3c9d0b8f2094cecb1 381 SUPERFAMILY SSF52540 86 347 2.05E-31 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_3670 96d969d08fe0bea3c9d0b8f2094cecb1 381 Gene3D G3DSA:3.40.50.300 1 381 9.1E-155 T 12-10-2018 JDM601_3280 a8154eaf8f90c534eabae7ccdab0867a 347 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 241 302 1.3E-26 T 12-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JDM601_3280 a8154eaf8f90c534eabae7ccdab0867a 347 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 24 218 2.3E-20 T 12-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JDM601_3280 a8154eaf8f90c534eabae7ccdab0867a 347 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 1 311 35.105 T 12-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JDM601_3280 a8154eaf8f90c534eabae7ccdab0867a 347 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 57 149 1.5E-25 T 12-10-2018 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JDM601_3280 a8154eaf8f90c534eabae7ccdab0867a 347 Gene3D G3DSA:1.10.150.20 239 311 8.3E-29 T 12-10-2018 JDM601_3280 a8154eaf8f90c534eabae7ccdab0867a 347 Gene3D G3DSA:3.30.1360.10 15 216 3.3E-84 T 12-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JDM601_3280 a8154eaf8f90c534eabae7ccdab0867a 347 SUPERFAMILY SSF55257 15 220 2.94E-26 T 12-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JDM601_3280 a8154eaf8f90c534eabae7ccdab0867a 347 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 19 310 1.0E-115 T 12-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JDM601_3280 a8154eaf8f90c534eabae7ccdab0867a 347 Gene3D G3DSA:2.170.120.12 48 168 3.3E-84 T 12-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JDM601_3280 a8154eaf8f90c534eabae7ccdab0867a 347 SUPERFAMILY SSF47789 247 319 4.19E-24 T 12-10-2018 JDM601_3280 a8154eaf8f90c534eabae7ccdab0867a 347 SMART SM00662 18 225 9.5E-99 T 12-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JDM601_3280 a8154eaf8f90c534eabae7ccdab0867a 347 SUPERFAMILY SSF56553 48 169 8.24E-44 T 12-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JDM601_3280 a8154eaf8f90c534eabae7ccdab0867a 347 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 250 321 3.0E-34 T 12-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JDM601_2791 4a963163e0cb460cb759b366183fc51e 290 Pfam PF00106 short chain dehydrogenase 13 201 9.6E-50 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2791 4a963163e0cb460cb759b366183fc51e 290 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 141 149 5.4E-7 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2791 4a963163e0cb460cb759b366183fc51e 290 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 161 180 5.4E-7 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2791 4a963163e0cb460cb759b366183fc51e 290 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 87 98 5.4E-7 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2791 4a963163e0cb460cb759b366183fc51e 290 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 148 176 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 JDM601_2791 4a963163e0cb460cb759b366183fc51e 290 SUPERFAMILY SSF51735 8 261 1.16E-62 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_2791 4a963163e0cb460cb759b366183fc51e 290 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 135 151 6.7E-22 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2791 4a963163e0cb460cb759b366183fc51e 290 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 87 98 6.7E-22 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2791 4a963163e0cb460cb759b366183fc51e 290 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 12 29 6.7E-22 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2791 4a963163e0cb460cb759b366183fc51e 290 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 182 199 6.7E-22 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2791 4a963163e0cb460cb759b366183fc51e 290 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 161 180 6.7E-22 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2791 4a963163e0cb460cb759b366183fc51e 290 Gene3D G3DSA:3.40.50.720 6 272 5.9E-67 T 12-10-2018 JDM601_0487 f936c10c8e64f26127a837dda4f0d315 446 Pfam PF08031 Berberine and berberine like 398 443 1.3E-6 T 12-10-2018 IPR012951 Berberine/berberine-like GO:0016491|GO:0050660|GO:0055114 JDM601_0487 f936c10c8e64f26127a837dda4f0d315 446 Gene3D G3DSA:3.30.465.10 97 431 1.8E-96 T 12-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 JDM601_0487 f936c10c8e64f26127a837dda4f0d315 446 ProSitePatterns PS00862 Oxygen oxidoreductases covalent FAD-binding site. 31 64 - T 12-10-2018 IPR006093 Oxygen oxidoreductase covalent FAD-binding site GO:0016491|GO:0055114 JDM601_0487 f936c10c8e64f26127a837dda4f0d315 446 Gene3D G3DSA:3.30.43.10 6 84 7.3E-30 T 12-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 JDM601_0487 f936c10c8e64f26127a837dda4f0d315 446 SUPERFAMILY SSF55103 340 436 3.71E-7 T 12-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 JDM601_0487 f936c10c8e64f26127a837dda4f0d315 446 Gene3D G3DSA:3.40.462.20 197 403 1.8E-96 T 12-10-2018 JDM601_0487 f936c10c8e64f26127a837dda4f0d315 446 SUPERFAMILY SSF56176 6 197 1.68E-53 T 12-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 JDM601_0487 f936c10c8e64f26127a837dda4f0d315 446 Pfam PF01565 FAD binding domain 31 166 7.8E-33 T 12-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 JDM601_3548 8098c7206c67c93476ac6c82aa9fc42d 282 Pfam PF01063 Amino-transferase class IV 30 255 5.3E-47 T 12-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 JDM601_3548 8098c7206c67c93476ac6c82aa9fc42d 282 Gene3D G3DSA:3.30.470.10 2 115 1.7E-33 T 12-10-2018 JDM601_3548 8098c7206c67c93476ac6c82aa9fc42d 282 SUPERFAMILY SSF56752 4 275 1.24E-58 T 12-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 JDM601_3548 8098c7206c67c93476ac6c82aa9fc42d 282 Gene3D G3DSA:3.20.10.10 119 273 2.8E-49 T 12-10-2018 JDM601_3647 e57c63ec6c5994dddb1f0ff3fa4e3d57 451 SUPERFAMILY SSF52777 201 436 9.67E-6 T 12-10-2018 JDM601_3647 e57c63ec6c5994dddb1f0ff3fa4e3d57 451 Pfam PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain 1 247 7.3E-74 T 12-10-2018 IPR004255 O-acyltransferase, WSD1, N-terminal GO:0004144|GO:0045017 KEGG: 00073+2.3.1.20|KEGG: 00561+2.3.1.20 JDM601_3647 e57c63ec6c5994dddb1f0ff3fa4e3d57 451 Pfam PF06974 Protein of unknown function (DUF1298) 288 437 5.2E-32 T 12-10-2018 IPR009721 O-acyltransferase WSD1, C-terminal GO:0004144 KEGG: 00073+2.3.1.20|KEGG: 00561+2.3.1.20 JDM601_3647 e57c63ec6c5994dddb1f0ff3fa4e3d57 451 TIGRFAM TIGR02946 acyl_WS_DGAT: acyltransferase, WS/DGAT/MGAT 1 441 3.1E-142 T 12-10-2018 IPR014292 Acyltransferase, WS/DGAT/MGAT GO:0016746|GO:0045017 KEGG: 00073+2.3.1.20|KEGG: 00561+2.3.1.20 JDM601_3647 e57c63ec6c5994dddb1f0ff3fa4e3d57 451 SUPERFAMILY SSF52777 21 131 3.11E-7 T 12-10-2018 JDM601_3647 e57c63ec6c5994dddb1f0ff3fa4e3d57 451 Gene3D G3DSA:3.30.559.30 195 444 3.3E-5 T 12-10-2018 JDM601_0168 b43837dd84d59928072812ba5079017b 968 SUPERFAMILY SSF82866 517 733 3.66E-26 T 12-10-2018 JDM601_0168 b43837dd84d59928072812ba5079017b 968 Pfam PF03176 MMPL family 427 736 4.4E-31 T 12-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 JDM601_0168 b43837dd84d59928072812ba5079017b 968 Pfam PF03176 MMPL family 48 398 1.7E-46 T 12-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 JDM601_0168 b43837dd84d59928072812ba5079017b 968 SUPERFAMILY SSF82866 136 338 1.07E-28 T 12-10-2018 JDM601_3422 17f81683bf4477f9c1c37d4d0e8c82dc 203 Pfam PF00440 Bacterial regulatory proteins, tetR family 24 70 8.2E-11 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_3422 17f81683bf4477f9c1c37d4d0e8c82dc 203 SUPERFAMILY SSF46689 11 93 2.15E-15 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JDM601_3422 17f81683bf4477f9c1c37d4d0e8c82dc 203 Gene3D G3DSA:1.10.357.10 12 201 6.0E-29 T 12-10-2018 JDM601_3422 17f81683bf4477f9c1c37d4d0e8c82dc 203 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 24 37 3.6E-6 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_3422 17f81683bf4477f9c1c37d4d0e8c82dc 203 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 45 68 3.6E-6 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_2347 becb86154a3385f4c841187051ce6fd3 446 Gene3D G3DSA:1.10.3710.10 351 445 2.5E-24 T 12-10-2018 JDM601_2347 becb86154a3385f4c841187051ce6fd3 446 Pfam PF12002 MgsA AAA+ ATPase C terminal 273 438 4.6E-69 T 12-10-2018 IPR021886 MgsA AAA+ ATPase C-terminal JDM601_2347 becb86154a3385f4c841187051ce6fd3 446 SMART SM00382 60 176 1.5E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain JDM601_2347 becb86154a3385f4c841187051ce6fd3 446 Pfam PF16193 AAA C-terminal domain 198 272 3.4E-27 T 12-10-2018 IPR032423 AAA C-terminal domain JDM601_2347 becb86154a3385f4c841187051ce6fd3 446 SUPERFAMILY SSF48019 258 441 1.7E-73 T 12-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 JDM601_2347 becb86154a3385f4c841187051ce6fd3 446 Gene3D G3DSA:1.10.8.60 176 245 1.3E-12 T 12-10-2018 JDM601_2347 becb86154a3385f4c841187051ce6fd3 446 Gene3D G3DSA:1.20.272.10 246 350 2.9E-47 T 12-10-2018 JDM601_2347 becb86154a3385f4c841187051ce6fd3 446 SUPERFAMILY SSF52540 23 243 4.5E-38 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_2347 becb86154a3385f4c841187051ce6fd3 446 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 64 159 7.5E-15 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 JDM601_2347 becb86154a3385f4c841187051ce6fd3 446 Gene3D G3DSA:3.40.50.300 21 174 8.2E-37 T 12-10-2018 JDM601_2312 72bcc9717cf220284319f80ad0470005 372 PRINTS PR00096 Glutamine amidotransferase superfamily signature 225 234 2.2E-11 T 12-10-2018 JDM601_2312 72bcc9717cf220284319f80ad0470005 372 PRINTS PR00096 Glutamine amidotransferase superfamily signature 253 264 2.2E-11 T 12-10-2018 JDM601_2312 72bcc9717cf220284319f80ad0470005 372 PRINTS PR00096 Glutamine amidotransferase superfamily signature 344 357 2.2E-11 T 12-10-2018 JDM601_2312 72bcc9717cf220284319f80ad0470005 372 Pfam PF00117 Glutamine amidotransferase class-I 187 367 3.9E-36 T 12-10-2018 IPR017926 Glutamine amidotransferase JDM601_2312 72bcc9717cf220284319f80ad0470005 372 SUPERFAMILY SSF52317 159 370 9.63E-51 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like JDM601_2312 72bcc9717cf220284319f80ad0470005 372 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 3 372 42.739 T 12-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 JDM601_2312 72bcc9717cf220284319f80ad0470005 372 Gene3D G3DSA:3.50.30.20 3 156 7.1E-52 T 12-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 JDM601_2312 72bcc9717cf220284319f80ad0470005 372 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 5 133 2.0E-48 T 12-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 JDM601_2312 72bcc9717cf220284319f80ad0470005 372 PRINTS PR00097 Anthranilate synthase component II signature 225 234 5.7E-6 T 12-10-2018 JDM601_2312 72bcc9717cf220284319f80ad0470005 372 PRINTS PR00097 Anthranilate synthase component II signature 253 264 5.7E-6 T 12-10-2018 JDM601_2312 72bcc9717cf220284319f80ad0470005 372 PRINTS PR00097 Anthranilate synthase component II signature 344 357 5.7E-6 T 12-10-2018 JDM601_2312 72bcc9717cf220284319f80ad0470005 372 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 5 370 4.0E-130 T 12-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 JDM601_2312 72bcc9717cf220284319f80ad0470005 372 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 183 197 1.7E-33 T 12-10-2018 JDM601_2312 72bcc9717cf220284319f80ad0470005 372 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 295 306 1.7E-33 T 12-10-2018 JDM601_2312 72bcc9717cf220284319f80ad0470005 372 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 222 236 1.7E-33 T 12-10-2018 JDM601_2312 72bcc9717cf220284319f80ad0470005 372 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 253 269 1.7E-33 T 12-10-2018 JDM601_2312 72bcc9717cf220284319f80ad0470005 372 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 270 287 1.7E-33 T 12-10-2018 JDM601_2312 72bcc9717cf220284319f80ad0470005 372 Gene3D G3DSA:3.40.50.880 157 371 2.6E-55 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like JDM601_2312 72bcc9717cf220284319f80ad0470005 372 SMART SM01097 3 135 9.4E-78 T 12-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 JDM601_2312 72bcc9717cf220284319f80ad0470005 372 SUPERFAMILY SSF52021 4 138 6.93E-50 T 12-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 JDM601_3572 f40907a418bd331e32f5a5185747c713 265 Pfam PF04454 Encapsulating protein for peroxidase 1 251 5.7E-96 T 12-10-2018 IPR007544 Encapsulating protein for peroxidase GO:0008233|GO:0042742 JDM601_3572 f40907a418bd331e32f5a5185747c713 265 Gene3D G3DSA:3.30.2400.30 4 254 4.0E-75 T 12-10-2018 JDM601_3572 f40907a418bd331e32f5a5185747c713 265 Gene3D G3DSA:3.30.2320.10 132 260 4.0E-75 T 12-10-2018 JDM601_3572 f40907a418bd331e32f5a5185747c713 265 PIRSF PIRSF019254 1 265 2.8E-93 T 12-10-2018 IPR007544 Encapsulating protein for peroxidase GO:0008233|GO:0042742 JDM601_1563 c796d91068bb6e6a7e90867cbffe8a40 266 SUPERFAMILY SSF50249 1 79 8.05E-21 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold JDM601_1563 c796d91068bb6e6a7e90867cbffe8a40 266 Pfam PF02565 Recombination protein O C terminal 85 237 7.6E-30 T 12-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 JDM601_1563 c796d91068bb6e6a7e90867cbffe8a40 266 SUPERFAMILY SSF57863 82 232 1.75E-35 T 12-10-2018 IPR037278 ARFGAP/RecO-like zinc finger JDM601_1563 c796d91068bb6e6a7e90867cbffe8a40 266 TIGRFAM TIGR00613 reco: DNA repair protein RecO 5 181 2.2E-29 T 12-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 JDM601_1563 c796d91068bb6e6a7e90867cbffe8a40 266 Hamap MF_00201 DNA repair protein RecO [recO]. 2 243 25.226 T 12-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 JDM601_1563 c796d91068bb6e6a7e90867cbffe8a40 266 Pfam PF11967 Recombination protein O N terminal 1 79 2.6E-27 T 12-10-2018 IPR022572 DNA replication/recombination mediator RecO, N-terminal JDM601_1563 c796d91068bb6e6a7e90867cbffe8a40 266 Gene3D G3DSA:3.30.60.100 150 185 5.3E-17 T 12-10-2018 JDM601_1563 c796d91068bb6e6a7e90867cbffe8a40 266 Gene3D G3DSA:2.40.50.140 1 82 3.1E-29 T 12-10-2018 JDM601_1563 c796d91068bb6e6a7e90867cbffe8a40 266 Gene3D G3DSA:1.20.1440.120 89 217 5.3E-17 T 12-10-2018 JDM601_2276 479a004c1cfe0eca6c5cf1ed49c6e454 340 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 157 164 - T 12-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 JDM601_2276 479a004c1cfe0eca6c5cf1ed49c6e454 340 PIRSF PIRSF000149 1 339 5.5E-130 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 JDM601_2276 479a004c1cfe0eca6c5cf1ed49c6e454 340 SMART SM00846 3 159 7.7E-85 T 12-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 JDM601_2276 479a004c1cfe0eca6c5cf1ed49c6e454 340 SUPERFAMILY SSF55347 158 319 5.92E-73 T 12-10-2018 JDM601_2276 479a004c1cfe0eca6c5cf1ed49c6e454 340 Gene3D G3DSA:3.40.50.720 4 333 2.0E-145 T 12-10-2018 JDM601_2276 479a004c1cfe0eca6c5cf1ed49c6e454 340 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 331 7.5E-133 T 12-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 JDM601_2276 479a004c1cfe0eca6c5cf1ed49c6e454 340 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 236 253 2.5E-38 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 JDM601_2276 479a004c1cfe0eca6c5cf1ed49c6e454 340 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 180 196 2.5E-38 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 JDM601_2276 479a004c1cfe0eca6c5cf1ed49c6e454 340 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 117 130 2.5E-38 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 JDM601_2276 479a004c1cfe0eca6c5cf1ed49c6e454 340 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 276 291 2.5E-38 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 JDM601_2276 479a004c1cfe0eca6c5cf1ed49c6e454 340 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 153 171 2.5E-38 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 JDM601_2276 479a004c1cfe0eca6c5cf1ed49c6e454 340 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 110 4.2E-32 T 12-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 JDM601_2276 479a004c1cfe0eca6c5cf1ed49c6e454 340 SUPERFAMILY SSF51735 2 158 3.49E-57 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_2276 479a004c1cfe0eca6c5cf1ed49c6e454 340 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 164 319 3.6E-68 T 12-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 JDM601_2276 479a004c1cfe0eca6c5cf1ed49c6e454 340 Gene3D G3DSA:3.30.360.10 158 321 2.0E-145 T 12-10-2018 JDM601_2311 d9ff08f077816df2b04ef965fcf61af0 1114 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 430 550 7.1E-34 T 12-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 JDM601_2311 d9ff08f077816df2b04ef965fcf61af0 1114 SUPERFAMILY SSF52335 973 1109 1.83E-34 T 12-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily JDM601_2311 d9ff08f077816df2b04ef965fcf61af0 1114 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1100 12.774 T 12-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 JDM601_2311 d9ff08f077816df2b04ef965fcf61af0 1114 Gene3D G3DSA:3.30.470.20 125 407 1.6E-114 T 12-10-2018 JDM601_2311 d9ff08f077816df2b04ef965fcf61af0 1114 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 302 309 - T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 JDM601_2311 d9ff08f077816df2b04ef965fcf61af0 1114 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 133 339 1.7E-64 T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 JDM601_2311 d9ff08f077816df2b04ef965fcf61af0 1114 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 689 889 3.8E-33 T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 JDM601_2311 d9ff08f077816df2b04ef965fcf61af0 1114 SMART SM00851 986 1079 3.9E-27 T 12-10-2018 IPR011607 Methylglyoxal synthase-like domain JDM601_2311 d9ff08f077816df2b04ef965fcf61af0 1114 Gene3D G3DSA:3.30.470.20 681 966 2.2E-107 T 12-10-2018 JDM601_2311 d9ff08f077816df2b04ef965fcf61af0 1114 SUPERFAMILY SSF56059 689 964 6.72E-94 T 12-10-2018 JDM601_2311 d9ff08f077816df2b04ef965fcf61af0 1114 SUPERFAMILY SSF48108 401 553 2.75E-38 T 12-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 JDM601_2311 d9ff08f077816df2b04ef965fcf61af0 1114 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 854 861 - T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 JDM601_2311 d9ff08f077816df2b04ef965fcf61af0 1114 SUPERFAMILY SSF56059 133 405 9.72E-99 T 12-10-2018 JDM601_2311 d9ff08f077816df2b04ef965fcf61af0 1114 Gene3D G3DSA:3.40.50.1380 967 1112 1.8E-39 T 12-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily JDM601_2311 d9ff08f077816df2b04ef965fcf61af0 1114 Gene3D G3DSA:3.40.50.20 1 121 2.2E-43 T 12-10-2018 JDM601_2311 d9ff08f077816df2b04ef965fcf61af0 1114 SUPERFAMILY SSF52440 567 690 6.62E-43 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily JDM601_2311 d9ff08f077816df2b04ef965fcf61af0 1114 SUPERFAMILY SSF52440 1 132 2.88E-42 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily JDM601_2311 d9ff08f077816df2b04ef965fcf61af0 1114 Gene3D G3DSA:3.40.50.20 561 678 1.1E-45 T 12-10-2018 JDM601_2311 d9ff08f077816df2b04ef965fcf61af0 1114 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1089 0.0 T 12-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 JDM601_2311 d9ff08f077816df2b04ef965fcf61af0 1114 Gene3D G3DSA:1.10.1030.10 410 555 1.0E-34 T 12-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 JDM601_2311 d9ff08f077816df2b04ef965fcf61af0 1114 SMART SM01096 427 550 6.0E-54 T 12-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 JDM601_2311 d9ff08f077816df2b04ef965fcf61af0 1114 Pfam PF02142 MGS-like domain 987 1079 9.2E-22 T 12-10-2018 IPR011607 Methylglyoxal synthase-like domain JDM601_2311 d9ff08f077816df2b04ef965fcf61af0 1114 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 725 739 - T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 JDM601_2311 d9ff08f077816df2b04ef965fcf61af0 1114 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 384 402 1.7E-60 T 12-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 JDM601_2311 d9ff08f077816df2b04ef965fcf61af0 1114 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 244 261 1.7E-60 T 12-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 JDM601_2311 d9ff08f077816df2b04ef965fcf61af0 1114 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 302 331 1.7E-60 T 12-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 JDM601_2311 d9ff08f077816df2b04ef965fcf61af0 1114 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 1.7E-60 T 12-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 JDM601_2311 d9ff08f077816df2b04ef965fcf61af0 1114 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 173 185 1.7E-60 T 12-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 JDM601_2311 d9ff08f077816df2b04ef965fcf61af0 1114 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 209 228 1.7E-60 T 12-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 JDM601_2311 d9ff08f077816df2b04ef965fcf61af0 1114 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 1.7E-60 T 12-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 JDM601_2758 394733120ded2ed99ba1763570a80d27 245 SUPERFAMILY SSF51161 37 219 1.57E-29 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily JDM601_2758 394733120ded2ed99ba1763570a80d27 245 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 164 198 5.0E-7 T 12-10-2018 IPR001451 Hexapeptide repeat JDM601_2758 394733120ded2ed99ba1763570a80d27 245 Gene3D G3DSA:2.160.10.10 52 242 4.3E-33 T 12-10-2018 JDM601_0260 1f05742f588ba8b77bfb9aa4b52f27df 730 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 472 555 9.6E-18 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 JDM601_0260 1f05742f588ba8b77bfb9aa4b52f27df 730 Gene3D G3DSA:2.40.110.10 117 210 1.8E-5 T 12-10-2018 JDM601_0260 1f05742f588ba8b77bfb9aa4b52f27df 730 SUPERFAMILY SSF47203 217 343 1.61E-32 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 JDM601_0260 1f05742f588ba8b77bfb9aa4b52f27df 730 SUPERFAMILY SSF56645 364 589 5.63E-55 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 JDM601_0260 1f05742f588ba8b77bfb9aa4b52f27df 730 Gene3D G3DSA:1.20.140.10 583 729 1.1E-25 T 12-10-2018 JDM601_0260 1f05742f588ba8b77bfb9aa4b52f27df 730 Gene3D G3DSA:2.40.110.10 472 582 1.6E-30 T 12-10-2018 JDM601_0260 1f05742f588ba8b77bfb9aa4b52f27df 730 SUPERFAMILY SSF56645 4 205 1.57E-23 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 JDM601_0260 1f05742f588ba8b77bfb9aa4b52f27df 730 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 98 1.7E-11 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 JDM601_0260 1f05742f588ba8b77bfb9aa4b52f27df 730 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 378 468 2.7E-11 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 JDM601_0260 1f05742f588ba8b77bfb9aa4b52f27df 730 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 578 724 4.5E-15 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 JDM601_0260 1f05742f588ba8b77bfb9aa4b52f27df 730 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 218 340 1.3E-23 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 JDM601_0260 1f05742f588ba8b77bfb9aa4b52f27df 730 Gene3D G3DSA:1.10.540.10 364 467 4.7E-12 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 JDM601_0260 1f05742f588ba8b77bfb9aa4b52f27df 730 SUPERFAMILY SSF47203 578 726 7.09E-16 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 JDM601_0260 1f05742f588ba8b77bfb9aa4b52f27df 730 Gene3D G3DSA:1.10.540.10 3 116 1.1E-19 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 JDM601_0260 1f05742f588ba8b77bfb9aa4b52f27df 730 Gene3D G3DSA:1.20.140.10 214 356 5.4E-36 T 12-10-2018 JDM601_1416 60cc12dba6d0377b20107c3e74f19b71 836 Gene3D G3DSA:2.60.40.420 425 525 2.1E-9 T 12-10-2018 IPR008972 Cupredoxin JDM601_1416 60cc12dba6d0377b20107c3e74f19b71 836 PRINTS PR00695 Copper containing nitrite reductase signature 668 684 4.1E-7 T 12-10-2018 IPR001287 Nitrite reductase, copper-type GO:0005507|GO:0006807|GO:0050421|GO:0055114 KEGG: 00910+1.7.2.1|MetaCyc: PWY-6523|MetaCyc: PWY-6748|MetaCyc: PWY-7084 JDM601_1416 60cc12dba6d0377b20107c3e74f19b71 836 PRINTS PR00695 Copper containing nitrite reductase signature 594 610 4.1E-7 T 12-10-2018 IPR001287 Nitrite reductase, copper-type GO:0005507|GO:0006807|GO:0050421|GO:0055114 KEGG: 00910+1.7.2.1|MetaCyc: PWY-6523|MetaCyc: PWY-6748|MetaCyc: PWY-7084 JDM601_1416 60cc12dba6d0377b20107c3e74f19b71 836 PRINTS PR00695 Copper containing nitrite reductase signature 651 666 4.1E-7 T 12-10-2018 IPR001287 Nitrite reductase, copper-type GO:0005507|GO:0006807|GO:0050421|GO:0055114 KEGG: 00910+1.7.2.1|MetaCyc: PWY-6523|MetaCyc: PWY-6748|MetaCyc: PWY-7084 JDM601_1416 60cc12dba6d0377b20107c3e74f19b71 836 Gene3D G3DSA:2.60.40.420 686 836 2.7E-49 T 12-10-2018 IPR008972 Cupredoxin JDM601_1416 60cc12dba6d0377b20107c3e74f19b71 836 SUPERFAMILY SSF49503 409 520 6.92E-12 T 12-10-2018 IPR008972 Cupredoxin JDM601_1416 60cc12dba6d0377b20107c3e74f19b71 836 Pfam PF07732 Multicopper oxidase 589 686 1.6E-9 T 12-10-2018 IPR011707 Multicopper oxidase, type 3 GO:0005507 JDM601_1416 60cc12dba6d0377b20107c3e74f19b71 836 SUPERFAMILY SSF49503 686 836 1.51E-32 T 12-10-2018 IPR008972 Cupredoxin JDM601_1416 60cc12dba6d0377b20107c3e74f19b71 836 Pfam PF13473 Cupredoxin-like domain 413 495 2.3E-7 T 12-10-2018 IPR028096 EfeO-type cupredoxin-like domain JDM601_1416 60cc12dba6d0377b20107c3e74f19b71 836 SUPERFAMILY SSF49503 563 698 3.67E-31 T 12-10-2018 IPR008972 Cupredoxin JDM601_1416 60cc12dba6d0377b20107c3e74f19b71 836 Gene3D G3DSA:2.60.40.420 558 685 3.3E-33 T 12-10-2018 IPR008972 Cupredoxin JDM601_3161 1ceb3d50fae53c2b5f12bb5764959ac3 216 Pfam PF00378 Enoyl-CoA hydratase/isomerase 10 205 2.8E-20 T 12-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 JDM601_3161 1ceb3d50fae53c2b5f12bb5764959ac3 216 SUPERFAMILY SSF52096 2 206 7.47E-36 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily JDM601_3161 1ceb3d50fae53c2b5f12bb5764959ac3 216 Gene3D G3DSA:3.90.226.10 1 216 3.3E-48 T 12-10-2018 JDM601_2459 196c7ebd470431e6927acb1d85716d35 227 TIGRFAM TIGR00498 lexA: repressor LexA 13 227 2.3E-82 T 12-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 JDM601_2459 196c7ebd470431e6927acb1d85716d35 227 Hamap MF_00015 LexA repressor [lexA]. 14 227 33.022 T 12-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 JDM601_2459 196c7ebd470431e6927acb1d85716d35 227 SUPERFAMILY SSF46785 14 81 2.06E-20 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JDM601_2459 196c7ebd470431e6927acb1d85716d35 227 Gene3D G3DSA:2.10.109.10 112 227 2.8E-39 T 12-10-2018 JDM601_2459 196c7ebd470431e6927acb1d85716d35 227 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 143 153 1.9E-11 T 12-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 JDM601_2459 196c7ebd470431e6927acb1d85716d35 227 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 182 194 1.9E-11 T 12-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 JDM601_2459 196c7ebd470431e6927acb1d85716d35 227 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 154 165 1.9E-11 T 12-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 JDM601_2459 196c7ebd470431e6927acb1d85716d35 227 Gene3D G3DSA:1.10.10.10 14 79 4.8E-24 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JDM601_2459 196c7ebd470431e6927acb1d85716d35 227 SUPERFAMILY SSF51306 106 225 4.19E-35 T 12-10-2018 IPR036286 LexA/Signal peptidase-like superfamily JDM601_2459 196c7ebd470431e6927acb1d85716d35 227 Pfam PF01726 LexA DNA binding domain 13 76 2.7E-29 T 12-10-2018 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 JDM601_2459 196c7ebd470431e6927acb1d85716d35 227 Pfam PF00717 Peptidase S24-like 146 213 4.4E-15 T 12-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C JDM601_2019 75b78676a320f8b8757857d88af9b146 531 Gene3D G3DSA:3.50.50.60 246 523 5.7E-56 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_2019 75b78676a320f8b8757857d88af9b146 531 Gene3D G3DSA:3.90.700.10 319 455 5.7E-56 T 12-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 JDM601_2019 75b78676a320f8b8757857d88af9b146 531 Gene3D G3DSA:3.50.50.60 1 216 2.0E-56 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_2019 75b78676a320f8b8757857d88af9b146 531 SUPERFAMILY SSF51905 4 528 5.02E-36 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_2019 75b78676a320f8b8757857d88af9b146 531 Pfam PF00890 FAD binding domain 9 500 1.7E-51 T 12-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 JDM601_2019 75b78676a320f8b8757857d88af9b146 531 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 467 482 3.7E-5 T 12-10-2018 JDM601_2019 75b78676a320f8b8757857d88af9b146 531 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 9 31 3.7E-5 T 12-10-2018 JDM601_2019 75b78676a320f8b8757857d88af9b146 531 SUPERFAMILY SSF56425 312 470 3.84E-16 T 12-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 JDM601_4219 861e525b48a13b811f267df1b3954f0b 422 SUPERFAMILY SSF51556 4 370 3.89E-56 T 12-10-2018 IPR032466 Metal-dependent hydrolase JDM601_4219 861e525b48a13b811f267df1b3954f0b 422 Pfam PF04909 Amidohydrolase 101 369 3.0E-23 T 12-10-2018 IPR006680 Amidohydrolase-related GO:0016787 JDM601_4219 861e525b48a13b811f267df1b3954f0b 422 Gene3D G3DSA:3.20.20.140 3 367 6.0E-74 T 12-10-2018 JDM601_2377 dc9d3f58a2794739abff0dae5ff0099f 448 SUPERFAMILY SSF53383 36 446 1.36E-120 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase JDM601_2377 dc9d3f58a2794739abff0dae5ff0099f 448 PIRSF PIRSF000521 2 147 3.0E-6 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 JDM601_2377 dc9d3f58a2794739abff0dae5ff0099f 448 PIRSF PIRSF000521 140 448 1.9E-33 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 JDM601_2377 dc9d3f58a2794739abff0dae5ff0099f 448 Gene3D G3DSA:3.40.640.10 76 343 3.2E-165 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 JDM601_2377 dc9d3f58a2794739abff0dae5ff0099f 448 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 261 298 - T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 JDM601_2377 dc9d3f58a2794739abff0dae5ff0099f 448 Gene3D G3DSA:3.90.1150.10 23 441 3.2E-165 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 JDM601_2377 dc9d3f58a2794739abff0dae5ff0099f 448 Pfam PF00202 Aminotransferase class-III 37 441 2.1E-127 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 JDM601_2377 dc9d3f58a2794739abff0dae5ff0099f 448 TIGRFAM TIGR00700 GABAtrnsam: 4-aminobutyrate transaminase 27 445 5.5E-196 T 12-10-2018 IPR004632 4-aminobutyrate aminotransferase, bacterial GO:0003867|GO:0009448 JDM601_3571 dafd01095af311cb99f586f8be3b809b 334 TIGRFAM TIGR04537 encap_target: encapsulation C-terminal sorting signal 321 331 0.017 T 12-10-2018 JDM601_3571 dafd01095af311cb99f586f8be3b809b 334 Pfam PF04261 Dyp-type peroxidase family 6 291 1.1E-94 T 12-10-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 JDM601_3571 dafd01095af311cb99f586f8be3b809b 334 SUPERFAMILY SSF54909 4 294 1.27E-100 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel JDM601_3571 dafd01095af311cb99f586f8be3b809b 334 TIGRFAM TIGR01413 Dyp_perox_fam: Dyp-type peroxidase family 4 291 1.1E-84 T 12-10-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 JDM601_0252 df3b0f45fd815aec84c694f409dc082a 292 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 104 127 3.6E-7 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_0252 df3b0f45fd815aec84c694f409dc082a 292 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 83 96 3.6E-7 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_0252 df3b0f45fd815aec84c694f409dc082a 292 SUPERFAMILY SSF48498 151 268 1.97E-7 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily JDM601_0252 df3b0f45fd815aec84c694f409dc082a 292 Gene3D G3DSA:1.10.357.10 80 280 4.1E-42 T 12-10-2018 JDM601_0252 df3b0f45fd815aec84c694f409dc082a 292 SUPERFAMILY SSF46689 71 152 2.57E-16 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JDM601_0252 df3b0f45fd815aec84c694f409dc082a 292 Pfam PF01381 Helix-turn-helix 1 44 1.4E-8 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 JDM601_0252 df3b0f45fd815aec84c694f409dc082a 292 SMART SM00530 1 46 0.0099 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 JDM601_0252 df3b0f45fd815aec84c694f409dc082a 292 SUPERFAMILY SSF47413 1 49 4.55E-9 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 JDM601_0252 df3b0f45fd815aec84c694f409dc082a 292 Pfam PF00440 Bacterial regulatory proteins, tetR family 84 129 5.9E-14 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_0252 df3b0f45fd815aec84c694f409dc082a 292 Gene3D G3DSA:1.10.260.40 1 49 1.7E-10 T 12-10-2018 JDM601_2716 43178b7d46d90474652ca6b7d1a9830a 386 Pfam PF02627 Carboxymuconolactone decarboxylase family 290 372 2.0E-24 T 12-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 JDM601_2716 43178b7d46d90474652ca6b7d1a9830a 386 SUPERFAMILY SSF69118 259 376 9.29E-34 T 12-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 JDM601_2716 43178b7d46d90474652ca6b7d1a9830a 386 Gene3D G3DSA:1.20.1290.10 260 382 1.6E-37 T 12-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 JDM601_2716 43178b7d46d90474652ca6b7d1a9830a 386 PRINTS PR00111 Alpha/beta hydrolase fold signature 87 100 1.6E-7 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 JDM601_2716 43178b7d46d90474652ca6b7d1a9830a 386 PRINTS PR00111 Alpha/beta hydrolase fold signature 200 214 1.6E-7 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 JDM601_2716 43178b7d46d90474652ca6b7d1a9830a 386 PRINTS PR00111 Alpha/beta hydrolase fold signature 44 59 1.6E-7 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 JDM601_2716 43178b7d46d90474652ca6b7d1a9830a 386 PRINTS PR00111 Alpha/beta hydrolase fold signature 101 114 1.6E-7 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 JDM601_2716 43178b7d46d90474652ca6b7d1a9830a 386 SUPERFAMILY SSF53474 13 252 9.22E-44 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_2716 43178b7d46d90474652ca6b7d1a9830a 386 TIGRFAM TIGR02425 decarb_PcaC: 4-carboxymuconolactone decarboxylase 260 378 3.5E-53 T 12-10-2018 IPR012788 4-carboxymuconolactone decarboxylase KEGG: 00362+4.1.1.44 JDM601_2716 43178b7d46d90474652ca6b7d1a9830a 386 Gene3D G3DSA:3.40.50.1820 8 255 2.9E-52 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_2716 43178b7d46d90474652ca6b7d1a9830a 386 Pfam PF12697 Alpha/beta hydrolase family 26 248 6.2E-14 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 JDM601_2178 ef98ea4e45a21ff10217191def438468 150 SUPERFAMILY SSF50475 4 110 1.46E-21 T 12-10-2018 JDM601_2178 ef98ea4e45a21ff10217191def438468 150 Gene3D G3DSA:2.30.110.10 1 148 3.7E-20 T 12-10-2018 IPR012349 FMN-binding split barrel GO:0048037 JDM601_2178 ef98ea4e45a21ff10217191def438468 150 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 5 88 1.7E-8 T 12-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 JDM601_2178 ef98ea4e45a21ff10217191def438468 150 TIGRFAM TIGR03666 Rv2061_F420: PPOX class probable F420-dependent enzyme, Rv2061 family 3 145 6.1E-46 T 12-10-2018 IPR019965 PPOX class F420-dependent enzyme, family Rv2061, putative JDM601_1961 0f02e164f99de2fefe8e40212bc67df4 415 Pfam PF01070 FMN-dependent dehydrogenase 49 407 3.3E-128 T 12-10-2018 IPR000262 FMN-dependent dehydrogenase GO:0016491 Reactome: R-HSA-9033241 JDM601_1961 0f02e164f99de2fefe8e40212bc67df4 415 ProSitePatterns PS00557 FMN-dependent alpha-hydroxy acid dehydrogenases active site. 304 310 - T 12-10-2018 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site GO:0016491|GO:0055114 Reactome: R-HSA-9033241 JDM601_1961 0f02e164f99de2fefe8e40212bc67df4 415 PIRSF PIRSF000138 21 411 6.5E-129 T 12-10-2018 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent GO:0010181|GO:0016491|GO:0055114 Reactome: R-HSA-9033241 JDM601_1961 0f02e164f99de2fefe8e40212bc67df4 415 Gene3D G3DSA:3.20.20.70 39 413 1.8E-130 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JDM601_1961 0f02e164f99de2fefe8e40212bc67df4 415 SUPERFAMILY SSF51395 40 406 3.56E-95 T 12-10-2018 JDM601_2590 40d91c65de0be9a015a291c8c5aa786a 391 SUPERFAMILY SSF55347 122 258 3.6E-52 T 12-10-2018 JDM601_2590 40d91c65de0be9a015a291c8c5aa786a 391 PIRSF PIRSF006205 6 385 1.8E-137 T 12-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 JDM601_2590 40d91c65de0be9a015a291c8c5aa786a 391 Gene3D G3DSA:1.10.1740.10 297 382 2.0E-31 T 12-10-2018 JDM601_2590 40d91c65de0be9a015a291c8c5aa786a 391 Pfam PF13288 DXP reductoisomerase C-terminal domain 256 373 1.1E-35 T 12-10-2018 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 JDM601_2590 40d91c65de0be9a015a291c8c5aa786a 391 SUPERFAMILY SSF69055 287 379 4.97E-26 T 12-10-2018 IPR036169 DXP reductoisomerase, C-terminal domain superfamily KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 JDM601_2590 40d91c65de0be9a015a291c8c5aa786a 391 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 9 378 43.301 T 12-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 JDM601_2590 40d91c65de0be9a015a291c8c5aa786a 391 Gene3D G3DSA:3.40.50.720 5 144 4.5E-45 T 12-10-2018 JDM601_2590 40d91c65de0be9a015a291c8c5aa786a 391 SUPERFAMILY SSF51735 8 144 1.23E-31 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_2590 40d91c65de0be9a015a291c8c5aa786a 391 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 9 128 5.3E-35 T 12-10-2018 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 JDM601_2590 40d91c65de0be9a015a291c8c5aa786a 391 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 8 381 2.3E-113 T 12-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 JDM601_2590 40d91c65de0be9a015a291c8c5aa786a 391 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 140 223 4.3E-34 T 12-10-2018 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 JDM601_2778 b67d7269a019cc077573c2748170e531 121 Pfam PF13564 DoxX-like family 5 103 3.0E-13 T 12-10-2018 IPR032808 DoxX family JDM601_0462 9f406d57d4200ba5d4df1ce63483d3b4 130 SMART SM00530 21 76 5.4E-16 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 JDM601_0462 9f406d57d4200ba5d4df1ce63483d3b4 130 Pfam PF01381 Helix-turn-helix 22 75 1.5E-15 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 JDM601_0462 9f406d57d4200ba5d4df1ce63483d3b4 130 SUPERFAMILY SSF47413 16 78 9.57E-17 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 JDM601_0462 9f406d57d4200ba5d4df1ce63483d3b4 130 Gene3D G3DSA:1.10.260.40 14 101 8.2E-19 T 12-10-2018 JDM601_1117 7235320707cad07a25131d21a3379d7e 383 Gene3D G3DSA:3.40.47.10 6 266 3.4E-144 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 JDM601_1117 7235320707cad07a25131d21a3379d7e 383 Gene3D G3DSA:3.40.47.10 127 380 3.4E-144 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 JDM601_1117 7235320707cad07a25131d21a3379d7e 383 Pfam PF00108 Thiolase, N-terminal domain 5 252 4.2E-77 T 12-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 JDM601_1117 7235320707cad07a25131d21a3379d7e 383 PIRSF PIRSF000429 1 383 2.9E-122 T 12-10-2018 IPR002155 Thiolase GO:0016747 JDM601_1117 7235320707cad07a25131d21a3379d7e 383 ProSitePatterns PS00737 Thiolases signature 2. 329 345 - T 12-10-2018 IPR020613 Thiolase, conserved site GO:0016747 JDM601_1117 7235320707cad07a25131d21a3379d7e 383 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 381 1.1E-135 T 12-10-2018 IPR002155 Thiolase GO:0016747 JDM601_1117 7235320707cad07a25131d21a3379d7e 383 SUPERFAMILY SSF53901 261 382 1.65E-39 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 JDM601_1117 7235320707cad07a25131d21a3379d7e 383 Pfam PF02803 Thiolase, C-terminal domain 261 381 1.4E-41 T 12-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 JDM601_1117 7235320707cad07a25131d21a3379d7e 383 SUPERFAMILY SSF53901 3 260 2.76E-75 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 JDM601_2754 067c89f4e2a7c7e7a24d55490246bbec 692 SUPERFAMILY SSF82866 467 675 6.02E-25 T 12-10-2018 JDM601_2754 067c89f4e2a7c7e7a24d55490246bbec 692 Gene3D G3DSA:1.20.1640.10 163 336 4.7E-7 T 12-10-2018 JDM601_2754 067c89f4e2a7c7e7a24d55490246bbec 692 Pfam PF03176 MMPL family 51 367 7.5E-58 T 12-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 JDM601_2754 067c89f4e2a7c7e7a24d55490246bbec 692 Pfam PF03176 MMPL family 445 686 9.2E-44 T 12-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 JDM601_2754 067c89f4e2a7c7e7a24d55490246bbec 692 SUPERFAMILY SSF82866 107 339 4.45E-30 T 12-10-2018 JDM601_2351 2f2c310003eaba1f0b038e5529d51588 363 SUPERFAMILY SSF51735 151 326 7.31E-30 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_2351 2f2c310003eaba1f0b038e5529d51588 363 SMART SM00829 4 360 4.6E-4 T 12-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 JDM601_2351 2f2c310003eaba1f0b038e5529d51588 363 Gene3D G3DSA:3.40.50.720 166 305 6.6E-117 T 12-10-2018 JDM601_2351 2f2c310003eaba1f0b038e5529d51588 363 SUPERFAMILY SSF50129 1 184 8.07E-59 T 12-10-2018 IPR011032 GroES-like superfamily JDM601_2351 2f2c310003eaba1f0b038e5529d51588 363 SUPERFAMILY SSF50129 315 361 9.18E-9 T 12-10-2018 IPR011032 GroES-like superfamily JDM601_2351 2f2c310003eaba1f0b038e5529d51588 363 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 21 147 4.0E-29 T 12-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 JDM601_2351 2f2c310003eaba1f0b038e5529d51588 363 Gene3D G3DSA:3.90.180.10 1 359 6.6E-117 T 12-10-2018 JDM601_2351 2f2c310003eaba1f0b038e5529d51588 363 Pfam PF00107 Zinc-binding dehydrogenase 189 319 4.3E-20 T 12-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 JDM601_2351 2f2c310003eaba1f0b038e5529d51588 363 TIGRFAM TIGR03989 Rxyl_3153: NDMA-dependent alcohol dehydrogenase, Rxyl_3153 family 3 362 1.7E-165 T 12-10-2018 IPR023921 Alcohol dehydrogenase, zinc-type, actinomycetes KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396 JDM601_2351 2f2c310003eaba1f0b038e5529d51588 363 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 54 68 - T 12-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 JDM601_2953 c9e8cfcacf0888154aabfd0c11da174d 247 SUPERFAMILY SSF46894 145 243 1.25E-24 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 JDM601_2953 c9e8cfcacf0888154aabfd0c11da174d 247 Gene3D G3DSA:3.40.50.2300 19 148 7.1E-29 T 12-10-2018 JDM601_2953 c9e8cfcacf0888154aabfd0c11da174d 247 SMART SM00862 169 242 4.6E-25 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 JDM601_2953 c9e8cfcacf0888154aabfd0c11da174d 247 SUPERFAMILY SSF52172 23 151 2.56E-35 T 12-10-2018 IPR011006 CheY-like superfamily JDM601_2953 c9e8cfcacf0888154aabfd0c11da174d 247 Pfam PF00486 Transcriptional regulatory protein, C terminal 169 242 2.0E-22 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 JDM601_2953 c9e8cfcacf0888154aabfd0c11da174d 247 Gene3D G3DSA:1.10.10.10 149 246 4.0E-28 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JDM601_2953 c9e8cfcacf0888154aabfd0c11da174d 247 SMART SM00448 27 137 1.5E-34 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JDM601_2953 c9e8cfcacf0888154aabfd0c11da174d 247 Pfam PF00072 Response regulator receiver domain 29 137 7.5E-23 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JDM601_0294 50ded5ae5eb793f1c37e48ecbbf1d918 465 Pfam PF00823 PPE family 2 148 1.7E-56 T 12-10-2018 IPR000030 PPE family JDM601_0294 50ded5ae5eb793f1c37e48ecbbf1d918 465 SUPERFAMILY SSF140459 2 161 2.88E-55 T 12-10-2018 JDM601_0294 50ded5ae5eb793f1c37e48ecbbf1d918 465 Gene3D G3DSA:1.20.1260.20 1 162 1.0E-56 T 12-10-2018 IPR038332 PPE superfamily JDM601_1879 a0e255b93ef4ef742ff29650301cbdb6 419 SUPERFAMILY SSF51556 59 363 9.49E-74 T 12-10-2018 IPR032466 Metal-dependent hydrolase JDM601_1879 a0e255b93ef4ef742ff29650301cbdb6 419 SUPERFAMILY SSF51338 2 69 2.97E-10 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 JDM601_1879 a0e255b93ef4ef742ff29650301cbdb6 419 Gene3D G3DSA:3.20.20.140 60 366 7.5E-130 T 12-10-2018 JDM601_1879 a0e255b93ef4ef742ff29650301cbdb6 419 Pfam PF01979 Amidohydrolase family 57 418 5.4E-51 T 12-10-2018 IPR006680 Amidohydrolase-related GO:0016787 JDM601_1879 a0e255b93ef4ef742ff29650301cbdb6 419 Gene3D G3DSA:2.30.40.10 10 415 7.5E-130 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 JDM601_1879 a0e255b93ef4ef742ff29650301cbdb6 419 SUPERFAMILY SSF51338 345 418 1.3E-16 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 JDM601_0555 036983ec00b4aacee79266f18dd7f7f4 403 Gene3D G3DSA:3.50.50.60 2 341 6.3E-72 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_0555 036983ec00b4aacee79266f18dd7f7f4 403 Pfam PF01494 FAD binding domain 2 172 4.2E-15 T 12-10-2018 IPR002938 FAD-binding domain GO:0071949 JDM601_0555 036983ec00b4aacee79266f18dd7f7f4 403 SUPERFAMILY SSF51905 3 334 5.31E-45 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_0555 036983ec00b4aacee79266f18dd7f7f4 403 TIGRFAM TIGR02032 GG-red-SF: geranylgeranyl reductase family 3 311 2.8E-72 T 12-10-2018 IPR011777 Geranylgeranyl reductase family GO:0016628|GO:0055114 JDM601_0555 036983ec00b4aacee79266f18dd7f7f4 403 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 277 292 1.1E-10 T 12-10-2018 JDM601_0555 036983ec00b4aacee79266f18dd7f7f4 403 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 3 25 1.1E-10 T 12-10-2018 JDM601_0555 036983ec00b4aacee79266f18dd7f7f4 403 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 145 160 1.1E-10 T 12-10-2018 JDM601_0555 036983ec00b4aacee79266f18dd7f7f4 403 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 292 308 1.1E-10 T 12-10-2018 JDM601_1970 06bdffc559b3e4624eb35e51fe42cdde 149 Pfam PF12680 SnoaL-like domain 9 113 4.1E-12 T 12-10-2018 IPR037401 SnoaL-like domain JDM601_1970 06bdffc559b3e4624eb35e51fe42cdde 149 SUPERFAMILY SSF54427 3 131 1.37E-27 T 12-10-2018 IPR032710 NTF2-like domain superfamily JDM601_1970 06bdffc559b3e4624eb35e51fe42cdde 149 Gene3D G3DSA:3.10.450.50 1 126 1.3E-23 T 12-10-2018 JDM601_4214 653b4e123f442da06d793b3a4d88ff9d 147 Pfam PF05423 Mycobacterium membrane protein 12 147 1.9E-33 T 12-10-2018 IPR008693 Transport accessory protein MmpS JDM601_4214 653b4e123f442da06d793b3a4d88ff9d 147 Gene3D G3DSA:2.60.40.2880 58 147 2.1E-27 T 12-10-2018 IPR038468 Transport accessory protein MmpS, soluble domain superfamily JDM601_1026 c95fd8aa13a3aa3e59960a0294426699 164 Gene3D G3DSA:1.10.287.180 5 76 4.3E-22 T 12-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 JDM601_1026 c95fd8aa13a3aa3e59960a0294426699 164 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 83 160 1.1E-14 T 12-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 JDM601_1026 c95fd8aa13a3aa3e59960a0294426699 164 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 20 50 - T 12-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 JDM601_1026 c95fd8aa13a3aa3e59960a0294426699 164 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 124 140 - T 12-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 JDM601_1026 c95fd8aa13a3aa3e59960a0294426699 164 Pfam PF03449 Transcription elongation factor, N-terminal 8 76 2.8E-24 T 12-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 JDM601_1026 c95fd8aa13a3aa3e59960a0294426699 164 Hamap MF_00105 Transcription elongation factor GreA [greA]. 5 160 27.936 T 12-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 JDM601_1026 c95fd8aa13a3aa3e59960a0294426699 164 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 8 158 1.1E-43 T 12-10-2018 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 JDM601_1026 c95fd8aa13a3aa3e59960a0294426699 164 Gene3D G3DSA:3.10.50.30 81 163 3.6E-9 T 12-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 JDM601_1026 c95fd8aa13a3aa3e59960a0294426699 164 PIRSF PIRSF006092 1 162 6.0E-32 T 12-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 JDM601_1026 c95fd8aa13a3aa3e59960a0294426699 164 SUPERFAMILY SSF46557 7 78 1.57E-22 T 12-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 JDM601_1026 c95fd8aa13a3aa3e59960a0294426699 164 SUPERFAMILY SSF54534 82 159 4.58E-11 T 12-10-2018 JDM601_0261 53b24ae644629938f3dc53a0cc5f6021 318 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 38 313 1.9E-20 T 12-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 JDM601_0261 53b24ae644629938f3dc53a0cc5f6021 318 SUPERFAMILY SSF52283 22 133 2.65E-22 T 12-10-2018 JDM601_0261 53b24ae644629938f3dc53a0cc5f6021 318 SUPERFAMILY SSF51735 99 282 4.65E-51 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_0261 53b24ae644629938f3dc53a0cc5f6021 318 Gene3D G3DSA:3.40.50.720 98 280 1.7E-87 T 12-10-2018 JDM601_0261 53b24ae644629938f3dc53a0cc5f6021 318 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 191 213 - T 12-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site JDM601_0261 53b24ae644629938f3dc53a0cc5f6021 318 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 109 281 8.8E-54 T 12-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 JDM601_0261 53b24ae644629938f3dc53a0cc5f6021 318 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 220 236 - T 12-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site JDM601_0261 53b24ae644629938f3dc53a0cc5f6021 318 Gene3D G3DSA:3.40.50.720 35 307 1.7E-87 T 12-10-2018 JDM601_1342 962553f29e08c135d9633e6a8574e799 258 SUPERFAMILY SSF56281 2 247 6.09E-47 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like JDM601_1342 962553f29e08c135d9633e6a8574e799 258 Gene3D G3DSA:3.60.15.10 1 253 3.8E-66 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like JDM601_1342 962553f29e08c135d9633e6a8574e799 258 SMART SM00849 18 215 2.1E-4 T 12-10-2018 IPR001279 Metallo-beta-lactamase JDM601_1342 962553f29e08c135d9633e6a8574e799 258 Pfam PF12706 Beta-lactamase superfamily domain 51 223 4.5E-18 T 12-10-2018 IPR001279 Metallo-beta-lactamase JDM601_2538 f055d123521d2e15316a4339e61301f6 310 Pfam PF01687 Riboflavin kinase 174 307 7.2E-33 T 12-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 JDM601_2538 f055d123521d2e15316a4339e61301f6 310 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 1 307 4.7E-66 T 12-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 JDM601_2538 f055d123521d2e15316a4339e61301f6 310 SUPERFAMILY SSF82114 164 307 8.07E-38 T 12-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 JDM601_2538 f055d123521d2e15316a4339e61301f6 310 SUPERFAMILY SSF52374 1 165 4.44E-30 T 12-10-2018 JDM601_2538 f055d123521d2e15316a4339e61301f6 310 Gene3D G3DSA:3.40.50.620 1 175 8.1E-57 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JDM601_2538 f055d123521d2e15316a4339e61301f6 310 PIRSF PIRSF004491 1 310 1.9E-92 T 12-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 JDM601_2538 f055d123521d2e15316a4339e61301f6 310 SMART SM00904 173 308 6.2E-46 T 12-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 JDM601_2538 f055d123521d2e15316a4339e61301f6 310 Gene3D G3DSA:2.40.30.30 176 310 3.8E-43 T 12-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 JDM601_2538 f055d123521d2e15316a4339e61301f6 310 Pfam PF06574 FAD synthetase 1 141 1.3E-49 T 12-10-2018 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 JDM601_1964 6ee669b8ad4c525c576327aa4504098a 311 Gene3D G3DSA:3.40.190.10 98 297 2.7E-64 T 12-10-2018 JDM601_1964 6ee669b8ad4c525c576327aa4504098a 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 36 46 4.4E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JDM601_1964 6ee669b8ad4c525c576327aa4504098a 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 46 57 4.4E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JDM601_1964 6ee669b8ad4c525c576327aa4504098a 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 25 36 4.4E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JDM601_1964 6ee669b8ad4c525c576327aa4504098a 311 SUPERFAMILY SSF46785 9 118 2.34E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JDM601_1964 6ee669b8ad4c525c576327aa4504098a 311 Pfam PF03466 LysR substrate binding domain 94 297 8.2E-45 T 12-10-2018 IPR005119 LysR, substrate-binding JDM601_1964 6ee669b8ad4c525c576327aa4504098a 311 Gene3D G3DSA:3.40.190.10 168 269 2.7E-64 T 12-10-2018 JDM601_1964 6ee669b8ad4c525c576327aa4504098a 311 Gene3D G3DSA:1.10.10.10 8 91 1.1E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JDM601_1964 6ee669b8ad4c525c576327aa4504098a 311 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 13 69 1.9E-17 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JDM601_1964 6ee669b8ad4c525c576327aa4504098a 311 SUPERFAMILY SSF53850 95 302 9.41E-40 T 12-10-2018 JDM601_1105 353f94a3d293aaad30eb8c5597de4984 218 Gene3D G3DSA:1.10.357.10 68 211 9.1E-7 T 12-10-2018 JDM601_1105 353f94a3d293aaad30eb8c5597de4984 218 Gene3D G3DSA:1.10.10.60 13 67 9.6E-20 T 12-10-2018 JDM601_1105 353f94a3d293aaad30eb8c5597de4984 218 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 25 38 8.0E-10 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_1105 353f94a3d293aaad30eb8c5597de4984 218 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 46 69 8.0E-10 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_1105 353f94a3d293aaad30eb8c5597de4984 218 SUPERFAMILY SSF46689 13 90 1.61E-18 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JDM601_1105 353f94a3d293aaad30eb8c5597de4984 218 Pfam PF00440 Bacterial regulatory proteins, tetR family 25 71 9.1E-20 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_2864 e8914674829929ee801d08e36db6cbe4 450 Gene3D G3DSA:1.20.1440.230 339 432 1.1E-32 T 12-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 JDM601_2864 e8914674829929ee801d08e36db6cbe4 450 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 343 426 4.0E-31 T 12-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 JDM601_2864 e8914674829929ee801d08e36db6cbe4 450 TIGRFAM TIGR01959 nuoF_fam: NADH oxidoreductase (quinone), F subunit 18 426 1.2E-190 T 12-10-2018 IPR011537 NADH ubiquinone oxidoreductase, F subunit GO:0010181|GO:0016651|GO:0051287|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 JDM601_2864 e8914674829929ee801d08e36db6cbe4 450 ProSitePatterns PS00644 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 1. 180 195 - T 12-10-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 JDM601_2864 e8914674829929ee801d08e36db6cbe4 450 SUPERFAMILY SSF142019 15 252 2.88E-83 T 12-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 JDM601_2864 e8914674829929ee801d08e36db6cbe4 450 Pfam PF10531 SLBB domain 257 303 2.2E-10 T 12-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 JDM601_2864 e8914674829929ee801d08e36db6cbe4 450 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 354 365 - T 12-10-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 JDM601_2864 e8914674829929ee801d08e36db6cbe4 450 SUPERFAMILY SSF142984 255 336 3.79E-23 T 12-10-2018 JDM601_2864 e8914674829929ee801d08e36db6cbe4 450 SMART SM00928 341 386 1.9E-26 T 12-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 JDM601_2864 e8914674829929ee801d08e36db6cbe4 450 Gene3D G3DSA:3.40.50.11540 62 244 1.1E-75 T 12-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 JDM601_2864 e8914674829929ee801d08e36db6cbe4 450 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 57 232 8.5E-45 T 12-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 JDM601_2864 e8914674829929ee801d08e36db6cbe4 450 SUPERFAMILY SSF140490 337 433 8.63E-38 T 12-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 JDM601_2864 e8914674829929ee801d08e36db6cbe4 450 Gene3D G3DSA:3.10.20.600 245 338 4.2E-30 T 12-10-2018 JDM601_2883 0337ffd30cc3f96092b31c363b4cacfe 324 SUPERFAMILY SSF51735 111 273 5.42E-37 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_2883 0337ffd30cc3f96092b31c363b4cacfe 324 Gene3D G3DSA:3.40.50.720 122 290 5.6E-83 T 12-10-2018 JDM601_2883 0337ffd30cc3f96092b31c363b4cacfe 324 SMART SM00829 7 320 1.3E-34 T 12-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 JDM601_2883 0337ffd30cc3f96092b31c363b4cacfe 324 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 27 86 7.2E-6 T 12-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 JDM601_2883 0337ffd30cc3f96092b31c363b4cacfe 324 Gene3D G3DSA:3.90.180.10 25 320 5.6E-83 T 12-10-2018 JDM601_2883 0337ffd30cc3f96092b31c363b4cacfe 324 Pfam PF00107 Zinc-binding dehydrogenase 150 271 4.4E-25 T 12-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 JDM601_2883 0337ffd30cc3f96092b31c363b4cacfe 324 SUPERFAMILY SSF50129 1 137 1.89E-30 T 12-10-2018 IPR011032 GroES-like superfamily JDM601_2186 7816063d96b91a8600985d00983e1a39 313 PIRSF PIRSF500176 2 313 5.2E-81 T 12-10-2018 JDM601_2186 7816063d96b91a8600985d00983e1a39 313 SUPERFAMILY SSF53774 4 312 2.88E-75 T 12-10-2018 IPR036152 Asparaginase/glutaminase-like superfamily Reactome: R-HSA-70614 JDM601_2186 7816063d96b91a8600985d00983e1a39 313 PIRSF PIRSF001220 1 313 1.5E-78 T 12-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 JDM601_2186 7816063d96b91a8600985d00983e1a39 313 Gene3D G3DSA:3.40.50.1170 2 197 5.5E-52 T 12-10-2018 IPR037152 L-asparaginase, N-terminal domain superfamily Reactome: R-HSA-70614 JDM601_2186 7816063d96b91a8600985d00983e1a39 313 SMART SM00870 5 309 2.7E-89 T 12-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 JDM601_2186 7816063d96b91a8600985d00983e1a39 313 PRINTS PR00139 Asparaginase/glutaminase family signature 79 97 1.1E-14 T 12-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 JDM601_2186 7816063d96b91a8600985d00983e1a39 313 PRINTS PR00139 Asparaginase/glutaminase family signature 6 17 1.1E-14 T 12-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 JDM601_2186 7816063d96b91a8600985d00983e1a39 313 PRINTS PR00139 Asparaginase/glutaminase family signature 247 265 1.1E-14 T 12-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 JDM601_2186 7816063d96b91a8600985d00983e1a39 313 Pfam PF00710 Asparaginase, N-terminal 6 185 1.9E-45 T 12-10-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 JDM601_2186 7816063d96b91a8600985d00983e1a39 313 Gene3D G3DSA:3.40.50.40 199 312 1.1E-24 T 12-10-2018 IPR027473 L-asparaginase, C-terminal Reactome: R-HSA-70614 JDM601_2186 7816063d96b91a8600985d00983e1a39 313 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 8 16 - T 12-10-2018 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 JDM601_1468 46f0527d069635147f6da2c5fbe122e1 367 Hamap MF_00456 Glutamate 5-kinase [proB]. 13 264 33.784 T 12-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 JDM601_1468 46f0527d069635147f6da2c5fbe122e1 367 SUPERFAMILY SSF88697 280 365 1.55E-15 T 12-10-2018 IPR015947 PUA-like superfamily JDM601_1468 46f0527d069635147f6da2c5fbe122e1 367 PIRSF PIRSF000729 8 367 3.1E-118 T 12-10-2018 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922 JDM601_1468 46f0527d069635147f6da2c5fbe122e1 367 Gene3D G3DSA:3.40.1160.10 2 268 3.3E-77 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily JDM601_1468 46f0527d069635147f6da2c5fbe122e1 367 Pfam PF01472 PUA domain 280 349 5.3E-16 T 12-10-2018 IPR002478 PUA domain GO:0003723 JDM601_1468 46f0527d069635147f6da2c5fbe122e1 367 SUPERFAMILY SSF53633 14 258 5.5E-58 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily JDM601_1468 46f0527d069635147f6da2c5fbe122e1 367 SMART SM00359 280 359 3.6E-15 T 12-10-2018 IPR002478 PUA domain GO:0003723 JDM601_1468 46f0527d069635147f6da2c5fbe122e1 367 Pfam PF00696 Amino acid kinase family 15 239 1.7E-36 T 12-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 JDM601_1468 46f0527d069635147f6da2c5fbe122e1 367 ProSitePatterns PS00902 Glutamate 5-kinase signature. 213 230 - T 12-10-2018 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 JDM601_1468 46f0527d069635147f6da2c5fbe122e1 367 TIGRFAM TIGR01027 proB: glutamate 5-kinase 14 365 6.6E-129 T 12-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 JDM601_1468 46f0527d069635147f6da2c5fbe122e1 367 Gene3D G3DSA:2.30.130.10 269 367 2.9E-23 T 12-10-2018 IPR036974 PUA domain superfamily GO:0003723 JDM601_1468 46f0527d069635147f6da2c5fbe122e1 367 PRINTS PR00474 Glutamate 5-kinase family signature 124 145 2.7E-51 T 12-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 JDM601_1468 46f0527d069635147f6da2c5fbe122e1 367 PRINTS PR00474 Glutamate 5-kinase family signature 84 112 2.7E-51 T 12-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 JDM601_1468 46f0527d069635147f6da2c5fbe122e1 367 PRINTS PR00474 Glutamate 5-kinase family signature 50 64 2.7E-51 T 12-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 JDM601_1468 46f0527d069635147f6da2c5fbe122e1 367 PRINTS PR00474 Glutamate 5-kinase family signature 156 183 2.7E-51 T 12-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 JDM601_1468 46f0527d069635147f6da2c5fbe122e1 367 PRINTS PR00474 Glutamate 5-kinase family signature 215 235 2.7E-51 T 12-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 JDM601_1374 82f9c45759f31ebaa5c409225f7dfaec 101 Pfam PF05305 Protein of unknown function (DUF732) 40 98 3.7E-8 T 12-10-2018 IPR007969 Domain of unknown function DUF732 JDM601_0638 3d1775e03285b0a66a095f8d41cad743 275 Pfam PF00106 short chain dehydrogenase 6 198 1.3E-32 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0638 3d1775e03285b0a66a095f8d41cad743 275 Gene3D G3DSA:3.40.50.720 4 252 1.7E-55 T 12-10-2018 JDM601_0638 3d1775e03285b0a66a095f8d41cad743 275 SUPERFAMILY SSF51735 6 242 3.43E-46 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_0638 3d1775e03285b0a66a095f8d41cad743 275 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 3.2E-6 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0638 3d1775e03285b0a66a095f8d41cad743 275 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 140 148 3.2E-6 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0638 3d1775e03285b0a66a095f8d41cad743 275 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 159 178 3.2E-6 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0638 3d1775e03285b0a66a095f8d41cad743 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 134 150 5.6E-21 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0638 3d1775e03285b0a66a095f8d41cad743 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 5.6E-21 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0638 3d1775e03285b0a66a095f8d41cad743 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 5.6E-21 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0638 3d1775e03285b0a66a095f8d41cad743 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 5.6E-21 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0638 3d1775e03285b0a66a095f8d41cad743 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 212 232 5.6E-21 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0638 3d1775e03285b0a66a095f8d41cad743 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 5.6E-21 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2131 7ba800bbb8ba98b597392e69b8c02017 268 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 19 260 31.859 T 12-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 JDM601_2131 7ba800bbb8ba98b597392e69b8c02017 268 Gene3D G3DSA:3.20.20.70 4 265 3.4E-84 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JDM601_2131 7ba800bbb8ba98b597392e69b8c02017 268 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 53 66 - T 12-10-2018 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 JDM601_2131 7ba800bbb8ba98b597392e69b8c02017 268 SUPERFAMILY SSF51366 7 256 6.28E-76 T 12-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 JDM601_2131 7ba800bbb8ba98b597392e69b8c02017 268 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 13 259 1.0E-61 T 12-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 JDM601_2131 7ba800bbb8ba98b597392e69b8c02017 268 Pfam PF00290 Tryptophan synthase alpha chain 13 251 5.2E-68 T 12-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 JDM601_0384 1d621da131475a78757714ce07058e92 157 PRINTS PR00502 NUDIX hydrolase family signature 54 68 7.1E-6 T 12-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 JDM601_0384 1d621da131475a78757714ce07058e92 157 PRINTS PR00502 NUDIX hydrolase family signature 68 83 7.1E-6 T 12-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 JDM601_0384 1d621da131475a78757714ce07058e92 157 Pfam PF00293 NUDIX domain 20 139 2.2E-17 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 JDM601_0384 1d621da131475a78757714ce07058e92 157 SUPERFAMILY SSF55811 11 150 7.72E-28 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 JDM601_0384 1d621da131475a78757714ce07058e92 157 ProSitePatterns PS00893 Nudix box signature. 59 80 - T 12-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 JDM601_0384 1d621da131475a78757714ce07058e92 157 Gene3D G3DSA:3.90.79.10 20 153 1.2E-22 T 12-10-2018 JDM601_3997 27b02ca1cbb6f54137a2cb9508a5fbd6 423 Gene3D G3DSA:1.10.10.2840 281 409 1.7E-20 T 12-10-2018 JDM601_3997 27b02ca1cbb6f54137a2cb9508a5fbd6 423 Pfam PF13556 PucR C-terminal helix-turn-helix domain 350 405 1.2E-12 T 12-10-2018 IPR025736 PucR C-terminal helix-turn-helix domain JDM601_3663 138eae2b9d7ba84ad85f0d1ba791f40d 293 SUPERFAMILY SSF51679 12 263 3.01E-53 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 JDM601_3663 138eae2b9d7ba84ad85f0d1ba791f40d 293 Pfam PF00296 Luciferase-like monooxygenase 11 227 2.1E-48 T 12-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 JDM601_3663 138eae2b9d7ba84ad85f0d1ba791f40d 293 Gene3D G3DSA:3.20.20.30 2 260 2.1E-65 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 JDM601_3663 138eae2b9d7ba84ad85f0d1ba791f40d 293 TIGRFAM TIGR03619 F420_Rv2161c: probable F420-dependent oxidoreductase, Rv2161c family 18 254 2.6E-58 T 12-10-2018 IPR019921 Luciferase-like, F420-dependent oxidoreductase, Rv2161c, predicted JDM601_0897 3406efb7849764fdab80968b08c7bc5d 391 PIRSF PIRSF001554 1 387 5.0E-135 T 12-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 JDM601_0897 3406efb7849764fdab80968b08c7bc5d 391 Hamap MF_00558 Succinate--CoA ligase [ADP-forming] subunit beta [sucC]. 1 386 37.222 T 12-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 JDM601_0897 3406efb7849764fdab80968b08c7bc5d 391 Gene3D G3DSA:3.30.470.20 1 226 9.8E-77 T 12-10-2018 JDM601_0897 3406efb7849764fdab80968b08c7bc5d 391 SUPERFAMILY SSF56059 1 227 1.29E-64 T 12-10-2018 JDM601_0897 3406efb7849764fdab80968b08c7bc5d 391 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 385 1.1E-122 T 12-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 JDM601_0897 3406efb7849764fdab80968b08c7bc5d 391 Pfam PF00549 CoA-ligase 256 378 4.2E-13 T 12-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 JDM601_0897 3406efb7849764fdab80968b08c7bc5d 391 Gene3D G3DSA:3.30.1490.20 21 96 9.8E-77 T 12-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 JDM601_0897 3406efb7849764fdab80968b08c7bc5d 391 Pfam PF08442 ATP-grasp domain 2 194 1.2E-69 T 12-10-2018 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 JDM601_0897 3406efb7849764fdab80968b08c7bc5d 391 SUPERFAMILY SSF52210 231 384 4.71E-41 T 12-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 JDM601_0897 3406efb7849764fdab80968b08c7bc5d 391 Gene3D G3DSA:3.40.50.261 232 387 5.5E-47 T 12-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 JDM601_2222 fccadfab6d10c75e1b8ab293295f10ed 636 TIGRFAM TIGR00642 mmCoA_mut_beta: methylmalonyl-CoA mutase, small subunit 13 636 3.2E-212 T 12-10-2018 IPR004608 Methylmalonyl-CoA mutase, beta chain GO:0004494|GO:0019652|GO:0031419 KEGG: 00280+5.4.99.2|KEGG: 00630+5.4.99.2|KEGG: 00640+5.4.99.2|KEGG: 00720+5.4.99.2|MetaCyc: PWY-5743|MetaCyc: PWY-5789|MetaCyc: PWY-6728|MetaCyc: PWY-7384|MetaCyc: PWY-7854 JDM601_2222 fccadfab6d10c75e1b8ab293295f10ed 636 SUPERFAMILY SSF52242 478 636 1.41E-30 T 12-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 JDM601_2222 fccadfab6d10c75e1b8ab293295f10ed 636 Gene3D G3DSA:3.40.50.280 493 636 3.8E-33 T 12-10-2018 JDM601_2222 fccadfab6d10c75e1b8ab293295f10ed 636 Gene3D G3DSA:3.20.20.240 54 491 2.7E-137 T 12-10-2018 JDM601_2222 fccadfab6d10c75e1b8ab293295f10ed 636 Pfam PF01642 Methylmalonyl-CoA mutase 57 538 1.0E-120 T 12-10-2018 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic GO:0016866|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 JDM601_2222 fccadfab6d10c75e1b8ab293295f10ed 636 SUPERFAMILY SSF51703 56 532 1.96E-122 T 12-10-2018 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic GO:0003824|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 JDM601_3335 cb5f084b57c4ed7e6c680a459c2bb483 278 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 119 1.3E-33 T 12-10-2018 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 JDM601_3335 cb5f084b57c4ed7e6c680a459c2bb483 278 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 3 273 3.6E-130 T 12-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 JDM601_3335 cb5f084b57c4ed7e6c680a459c2bb483 278 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 273 48.523 T 12-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 JDM601_3335 cb5f084b57c4ed7e6c680a459c2bb483 278 Gene3D G3DSA:2.30.30.30 116 196 1.4E-31 T 12-10-2018 IPR014722 Ribosomal protein L2, domain 2 JDM601_3335 cb5f084b57c4ed7e6c680a459c2bb483 278 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 126 251 6.3E-55 T 12-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 JDM601_3335 cb5f084b57c4ed7e6c680a459c2bb483 278 ProSitePatterns PS00467 Ribosomal protein L2 signature. 219 230 - T 12-10-2018 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JDM601_3335 cb5f084b57c4ed7e6c680a459c2bb483 278 SUPERFAMILY SSF50249 3 126 1.92E-49 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold JDM601_3335 cb5f084b57c4ed7e6c680a459c2bb483 278 SMART SM01383 42 119 2.5E-40 T 12-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JDM601_3335 cb5f084b57c4ed7e6c680a459c2bb483 278 SUPERFAMILY SSF50104 127 271 6.02E-56 T 12-10-2018 IPR008991 Translation protein SH3-like domain superfamily JDM601_3335 cb5f084b57c4ed7e6c680a459c2bb483 278 SMART SM01382 125 253 9.0E-89 T 12-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 JDM601_3335 cb5f084b57c4ed7e6c680a459c2bb483 278 Gene3D G3DSA:4.10.950.10 197 274 8.5E-32 T 12-10-2018 IPR014726 Ribosomal protein L2, domain 3 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JDM601_3335 cb5f084b57c4ed7e6c680a459c2bb483 278 PIRSF PIRSF002158 4 275 6.8E-94 T 12-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JDM601_3335 cb5f084b57c4ed7e6c680a459c2bb483 278 Gene3D G3DSA:2.40.50.140 1 115 2.0E-46 T 12-10-2018 JDM601_1007 8c5a5b57042ac2bdd3e96a1dde14798c 123 Pfam PF01022 Bacterial regulatory protein, arsR family 46 93 1.4E-15 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 JDM601_1007 8c5a5b57042ac2bdd3e96a1dde14798c 123 Gene3D G3DSA:1.10.10.10 24 118 7.2E-29 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JDM601_1007 8c5a5b57042ac2bdd3e96a1dde14798c 123 SMART SM00418 38 118 1.4E-25 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 JDM601_1007 8c5a5b57042ac2bdd3e96a1dde14798c 123 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 62 73 9.1E-21 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 JDM601_1007 8c5a5b57042ac2bdd3e96a1dde14798c 123 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 90 105 9.1E-21 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 JDM601_1007 8c5a5b57042ac2bdd3e96a1dde14798c 123 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 75 90 9.1E-21 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 JDM601_1007 8c5a5b57042ac2bdd3e96a1dde14798c 123 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 40 55 9.1E-21 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 JDM601_1007 8c5a5b57042ac2bdd3e96a1dde14798c 123 SUPERFAMILY SSF46785 22 117 6.48E-26 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JDM601_1007 8c5a5b57042ac2bdd3e96a1dde14798c 123 ProSitePatterns PS00846 Bacterial regulatory proteins, arsR family signature. 64 82 - T 12-10-2018 IPR018334 ArsR-type transcription regulator, HTH motif GO:0003700|GO:0005622|GO:0006355 JDM601_4129 ec1326c59b096d4aec5c473850f7d165 551 SMART SM00644 220 384 7.0E-6 T 12-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 JDM601_4129 ec1326c59b096d4aec5c473850f7d165 551 SMART SM00701 207 355 5.7E-60 T 12-10-2018 IPR006619 Peptidoglycan recognition protein family domain, metazoa/bacteria GO:0008270|GO:0008745|GO:0009253 Reactome: R-HSA-6803157 JDM601_4129 ec1326c59b096d4aec5c473850f7d165 551 Gene3D G3DSA:3.40.80.10 202 398 2.8E-53 T 12-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 JDM601_4129 ec1326c59b096d4aec5c473850f7d165 551 Pfam PF08310 LGFP repeat 433 484 3.4E-18 T 12-10-2018 IPR013207 LGFP JDM601_4129 ec1326c59b096d4aec5c473850f7d165 551 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 230 384 3.3E-17 T 12-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 JDM601_4129 ec1326c59b096d4aec5c473850f7d165 551 SUPERFAMILY SSF55846 206 398 7.72E-47 T 12-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 JDM601_1945 2ee7ad931a6adcd87939109d948d332f 254 SUPERFAMILY SSF53850 33 251 2.08E-54 T 12-10-2018 JDM601_1945 2ee7ad931a6adcd87939109d948d332f 254 PIRSF PIRSF004846 2 254 5.1E-62 T 12-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 JDM601_1945 2ee7ad931a6adcd87939109d948d332f 254 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 39 248 1.0E-38 T 12-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 JDM601_1945 2ee7ad931a6adcd87939109d948d332f 254 Gene3D G3DSA:3.40.190.10 36 251 2.9E-59 T 12-10-2018 JDM601_1945 2ee7ad931a6adcd87939109d948d332f 254 Pfam PF13531 Bacterial extracellular solute-binding protein 34 251 1.1E-46 T 12-10-2018 JDM601_1945 2ee7ad931a6adcd87939109d948d332f 254 Gene3D G3DSA:3.40.190.10 112 214 2.9E-59 T 12-10-2018 JDM601_2701 4d3499bcbefa91423759e22c28b0ce53 163 Gene3D G3DSA:2.40.100.20 2 163 3.6E-57 T 12-10-2018 JDM601_2701 4d3499bcbefa91423759e22c28b0ce53 163 SUPERFAMILY SSF50891 6 149 3.79E-9 T 12-10-2018 IPR029000 Cyclophilin-like domain superfamily JDM601_2701 4d3499bcbefa91423759e22c28b0ce53 163 Pfam PF12903 Protein of unknown function (DUF3830) 7 162 6.2E-64 T 12-10-2018 IPR024532 Protein of unknown function DUF3830 JDM601_0975 b8488ba36fef7812a6d5e0392dc780ba 296 Gene3D G3DSA:3.40.50.720 3 296 7.9E-89 T 12-10-2018 JDM601_0975 b8488ba36fef7812a6d5e0392dc780ba 296 Pfam PF00106 short chain dehydrogenase 19 210 8.8E-22 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0975 b8488ba36fef7812a6d5e0392dc780ba 296 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 3.1E-5 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0975 b8488ba36fef7812a6d5e0392dc780ba 296 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 89 100 3.1E-5 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0975 b8488ba36fef7812a6d5e0392dc780ba 296 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 169 188 3.1E-5 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0975 b8488ba36fef7812a6d5e0392dc780ba 296 SUPERFAMILY SSF51735 14 248 2.67E-52 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_0975 b8488ba36fef7812a6d5e0392dc780ba 296 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 89 100 1.3E-9 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0975 b8488ba36fef7812a6d5e0392dc780ba 296 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 19 36 1.3E-9 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0975 b8488ba36fef7812a6d5e0392dc780ba 296 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 169 188 1.3E-9 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0784 08e57a4dc368ac8b458416291f78e505 403 SUPERFAMILY SSF53901 281 402 9.82E-45 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 JDM601_0784 08e57a4dc368ac8b458416291f78e505 403 Pfam PF00108 Thiolase, N-terminal domain 6 230 2.6E-43 T 12-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 JDM601_0784 08e57a4dc368ac8b458416291f78e505 403 Gene3D G3DSA:3.40.47.10 126 398 2.7E-145 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 JDM601_0784 08e57a4dc368ac8b458416291f78e505 403 SUPERFAMILY SSF53901 2 276 2.44E-61 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 JDM601_0784 08e57a4dc368ac8b458416291f78e505 403 ProSitePatterns PS00099 Thiolases active site. 384 397 - T 12-10-2018 IPR020610 Thiolase, active site GO:0016747 JDM601_0784 08e57a4dc368ac8b458416291f78e505 403 Gene3D G3DSA:3.40.47.10 7 300 2.7E-145 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 JDM601_0784 08e57a4dc368ac8b458416291f78e505 403 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 7 401 1.1E-128 T 12-10-2018 IPR002155 Thiolase GO:0016747 JDM601_0784 08e57a4dc368ac8b458416291f78e505 403 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 88 106 - T 12-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 JDM601_0784 08e57a4dc368ac8b458416291f78e505 403 ProSitePatterns PS00737 Thiolases signature 2. 349 365 - T 12-10-2018 IPR020613 Thiolase, conserved site GO:0016747 JDM601_0784 08e57a4dc368ac8b458416291f78e505 403 Pfam PF02803 Thiolase, C-terminal domain 281 402 5.3E-47 T 12-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 JDM601_0784 08e57a4dc368ac8b458416291f78e505 403 PIRSF PIRSF000429 1 403 1.8E-110 T 12-10-2018 IPR002155 Thiolase GO:0016747 JDM601_3930 f6ff39aa362610a9dca1cce56ebff128 533 SMART SM00304 256 308 1.0E-8 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JDM601_3930 f6ff39aa362610a9dca1cce56ebff128 533 SUPERFAMILY SSF158472 257 305 1.7E-6 T 12-10-2018 JDM601_3930 f6ff39aa362610a9dca1cce56ebff128 533 SMART SM00044 304 494 5.5E-8 T 12-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 JDM601_3930 f6ff39aa362610a9dca1cce56ebff128 533 Gene3D G3DSA:3.30.70.1230 326 521 6.4E-44 T 12-10-2018 IPR029787 Nucleotide cyclase JDM601_3930 f6ff39aa362610a9dca1cce56ebff128 533 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 337 504 1.1E-20 T 12-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 JDM601_3930 f6ff39aa362610a9dca1cce56ebff128 533 Pfam PF00672 HAMP domain 257 303 2.4E-6 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JDM601_3930 f6ff39aa362610a9dca1cce56ebff128 533 Gene3D G3DSA:1.20.1480.50 213 312 4.7E-7 T 12-10-2018 JDM601_3930 f6ff39aa362610a9dca1cce56ebff128 533 SUPERFAMILY SSF55073 332 509 5.18E-43 T 12-10-2018 IPR029787 Nucleotide cyclase JDM601_2572 7bdde622f6c04a393cd3154463cc1011 476 Gene3D G3DSA:3.50.50.60 4 238 2.1E-10 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_2572 7bdde622f6c04a393cd3154463cc1011 476 SUPERFAMILY SSF51905 3 255 2.94E-21 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_2572 7bdde622f6c04a393cd3154463cc1011 476 TIGRFAM TIGR01320 mal_quin_oxido: malate dehydrogenase (acceptor) 1 465 4.3E-198 T 12-10-2018 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254 JDM601_2572 7bdde622f6c04a393cd3154463cc1011 476 Hamap MF_00212 Probable malate:quinone oxidoreductase [mqo]. 1 468 44.226 T 12-10-2018 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254 JDM601_2572 7bdde622f6c04a393cd3154463cc1011 476 Pfam PF06039 Malate:quinone oxidoreductase (Mqo) 2 468 1.8E-181 T 12-10-2018 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254 JDM601_2572 7bdde622f6c04a393cd3154463cc1011 476 Gene3D G3DSA:3.30.9.10 95 160 2.1E-10 T 12-10-2018 JDM601_2121 a87a7fd56c9fb11f852b05e61e69cf5c 207 Gene3D G3DSA:3.40.50.2300 2 142 7.3E-38 T 12-10-2018 JDM601_2121 a87a7fd56c9fb11f852b05e61e69cf5c 207 Gene3D G3DSA:1.10.10.10 143 204 3.3E-27 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JDM601_2121 a87a7fd56c9fb11f852b05e61e69cf5c 207 Pfam PF00072 Response regulator receiver domain 16 125 1.8E-28 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JDM601_2121 a87a7fd56c9fb11f852b05e61e69cf5c 207 SMART SM00448 14 125 3.3E-37 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JDM601_2121 a87a7fd56c9fb11f852b05e61e69cf5c 207 Pfam PF03861 ANTAR domain 145 196 1.7E-19 T 12-10-2018 IPR005561 ANTAR domain GO:0003723 JDM601_2121 a87a7fd56c9fb11f852b05e61e69cf5c 207 PIRSF PIRSF036382 5 203 2.0E-72 T 12-10-2018 IPR008327 Signal transduction response regulator, antiterminator JDM601_2121 a87a7fd56c9fb11f852b05e61e69cf5c 207 SMART SM01012 141 196 3.1E-23 T 12-10-2018 IPR005561 ANTAR domain GO:0003723 JDM601_2121 a87a7fd56c9fb11f852b05e61e69cf5c 207 SUPERFAMILY SSF52172 13 196 1.71E-57 T 12-10-2018 IPR011006 CheY-like superfamily JDM601_0458 a592966ee0fa87e4af77b9349d73bdee 428 SUPERFAMILY SSF51621 8 427 2.33E-156 T 12-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 JDM601_0458 a592966ee0fa87e4af77b9349d73bdee 428 ProSitePatterns PS00161 Isocitrate lyase signature. 189 194 - T 12-10-2018 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824 JDM601_0458 a592966ee0fa87e4af77b9349d73bdee 428 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 12 251 1.1E-107 T 12-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 JDM601_0458 a592966ee0fa87e4af77b9349d73bdee 428 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 252 427 1.1E-86 T 12-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 JDM601_0458 a592966ee0fa87e4af77b9349d73bdee 428 Pfam PF00463 Isocitrate lyase family 15 251 4.9E-52 T 12-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 JDM601_0458 a592966ee0fa87e4af77b9349d73bdee 428 Pfam PF00463 Isocitrate lyase family 252 426 2.9E-47 T 12-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 JDM601_0458 a592966ee0fa87e4af77b9349d73bdee 428 Gene3D G3DSA:3.20.20.60 2 428 8.8E-173 T 12-10-2018 JDM601_0458 a592966ee0fa87e4af77b9349d73bdee 428 PIRSF PIRSF001362 2 428 6.2E-233 T 12-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 JDM601_3033 78909a3bbba50b44aced3b41883e69f8 393 SUPERFAMILY SSF51246 304 381 4.47E-15 T 12-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 JDM601_3033 78909a3bbba50b44aced3b41883e69f8 393 SUPERFAMILY SSF52440 2 92 1.58E-20 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily JDM601_3033 78909a3bbba50b44aced3b41883e69f8 393 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 1 361 37.355 T 12-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 JDM601_3033 78909a3bbba50b44aced3b41883e69f8 393 SUPERFAMILY SSF56059 95 298 5.83E-54 T 12-10-2018 JDM601_3033 78909a3bbba50b44aced3b41883e69f8 393 Pfam PF02222 ATP-grasp domain 104 279 3.7E-53 T 12-10-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type JDM601_3033 78909a3bbba50b44aced3b41883e69f8 393 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 1 362 9.9E-122 T 12-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 JDM601_3033 78909a3bbba50b44aced3b41883e69f8 393 Gene3D G3DSA:3.40.50.20 1 104 1.8E-27 T 12-10-2018 JDM601_3033 78909a3bbba50b44aced3b41883e69f8 393 Gene3D G3DSA:3.30.470.20 179 393 5.1E-71 T 12-10-2018 JDM601_3033 78909a3bbba50b44aced3b41883e69f8 393 Gene3D G3DSA:3.30.1490.20 106 178 2.0E-12 T 12-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 JDM601_3965 e92f9321bc509823a5cf4b594d1d65de 599 Pfam PF00723 Glycosyl hydrolases family 15 219 583 1.1E-66 T 12-10-2018 IPR011613 GH15-like domain Reactome: R-HSA-70221 JDM601_3965 e92f9321bc509823a5cf4b594d1d65de 599 Gene3D G3DSA:1.50.10.10 219 595 1.5E-90 T 12-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 JDM601_3965 e92f9321bc509823a5cf4b594d1d65de 599 SUPERFAMILY SSF48208 204 586 4.91E-107 T 12-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 JDM601_1809 95ce3b425a32ac20239ddcabf6cb7610 726 Pfam PF04851 Type III restriction enzyme, res subunit 43 165 1.4E-8 T 12-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 JDM601_1809 95ce3b425a32ac20239ddcabf6cb7610 726 SUPERFAMILY SSF52540 60 607 1.24E-34 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_1809 95ce3b425a32ac20239ddcabf6cb7610 726 Pfam PF12344 Ultra-violet resistance protein B 578 619 4.0E-22 T 12-10-2018 IPR024759 UvrB, YAD/RRR-motif-containing domain JDM601_1809 95ce3b425a32ac20239ddcabf6cb7610 726 SUPERFAMILY SSF46600 671 718 1.7E-11 T 12-10-2018 IPR036876 UVR domain superfamily JDM601_1809 95ce3b425a32ac20239ddcabf6cb7610 726 Pfam PF00271 Helicase conserved C-terminal domain 463 570 3.5E-17 T 12-10-2018 IPR001650 Helicase, C-terminal JDM601_1809 95ce3b425a32ac20239ddcabf6cb7610 726 Gene3D G3DSA:3.40.50.300 302 440 1.2E-53 T 12-10-2018 JDM601_1809 95ce3b425a32ac20239ddcabf6cb7610 726 Gene3D G3DSA:3.40.50.300 441 622 3.5E-48 T 12-10-2018 JDM601_1809 95ce3b425a32ac20239ddcabf6cb7610 726 SMART SM00490 486 572 6.3E-16 T 12-10-2018 IPR001650 Helicase, C-terminal JDM601_1809 95ce3b425a32ac20239ddcabf6cb7610 726 SMART SM00487 36 451 3.1E-28 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain JDM601_1809 95ce3b425a32ac20239ddcabf6cb7610 726 Gene3D G3DSA:4.10.860.10 669 718 1.7E-9 T 12-10-2018 JDM601_1809 95ce3b425a32ac20239ddcabf6cb7610 726 Gene3D G3DSA:3.40.50.300 24 263 8.4E-71 T 12-10-2018 JDM601_1809 95ce3b425a32ac20239ddcabf6cb7610 726 Pfam PF02151 UvrB/uvrC motif 683 716 3.0E-8 T 12-10-2018 IPR001943 UVR domain GO:0005515 JDM601_1809 95ce3b425a32ac20239ddcabf6cb7610 726 SUPERFAMILY SSF52540 32 441 1.02E-130 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_1809 95ce3b425a32ac20239ddcabf6cb7610 726 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 31 714 0.0 T 12-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 JDM601_1809 95ce3b425a32ac20239ddcabf6cb7610 726 Hamap MF_00204 UvrABC system protein B [uvrB]. 30 716 42.864 T 12-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 JDM601_3141 b61c2dc000a27db6decde127ea192f50 434 SUPERFAMILY SSF52418 86 325 3.66E-74 T 12-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 JDM601_3141 b61c2dc000a27db6decde127ea192f50 434 Gene3D G3DSA:1.20.970.10 6 71 7.8E-22 T 12-10-2018 JDM601_3141 b61c2dc000a27db6decde127ea192f50 434 SUPERFAMILY SSF47648 6 73 1.7E-18 T 12-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 JDM601_3141 b61c2dc000a27db6decde127ea192f50 434 Gene3D G3DSA:3.40.1030.10 87 327 5.7E-125 T 12-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 JDM601_3141 b61c2dc000a27db6decde127ea192f50 434 SUPERFAMILY SSF54680 329 418 3.66E-21 T 12-10-2018 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 JDM601_3141 b61c2dc000a27db6decde127ea192f50 434 Gene3D G3DSA:3.90.1170.30 328 410 5.7E-125 T 12-10-2018 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 JDM601_3141 b61c2dc000a27db6decde127ea192f50 434 Pfam PF00591 Glycosyl transferase family, a/b domain 86 298 1.1E-29 T 12-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 JDM601_3141 b61c2dc000a27db6decde127ea192f50 434 TIGRFAM TIGR02644 Y_phosphoryl: pyrimidine-nucleoside phosphorylase 9 413 8.7E-152 T 12-10-2018 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic GO:0006213|GO:0016154 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181|Reactome: R-HSA-73614|Reactome: R-HSA-73621 JDM601_3141 b61c2dc000a27db6decde127ea192f50 434 Pfam PF02885 Glycosyl transferase family, helical bundle domain 10 70 1.2E-16 T 12-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 JDM601_3141 b61c2dc000a27db6decde127ea192f50 434 PIRSF PIRSF000478 4 429 4.8E-142 T 12-10-2018 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase GO:0004645|GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 JDM601_3141 b61c2dc000a27db6decde127ea192f50 434 ProSitePatterns PS00647 Thymidine and pyrimidine-nucleoside phosphorylases signature. 119 134 - T 12-10-2018 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 JDM601_3141 b61c2dc000a27db6decde127ea192f50 434 Pfam PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain 343 415 1.5E-18 T 12-10-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 JDM601_3141 b61c2dc000a27db6decde127ea192f50 434 SMART SM00941 342 416 1.6E-24 T 12-10-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 JDM601_3866 8dfa2ad15c72d9b5b26db2f3bb14026e 201 Pfam PF00440 Bacterial regulatory proteins, tetR family 21 65 8.3E-16 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_3866 8dfa2ad15c72d9b5b26db2f3bb14026e 201 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 21 34 6.1E-7 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_3866 8dfa2ad15c72d9b5b26db2f3bb14026e 201 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 42 65 6.1E-7 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_3866 8dfa2ad15c72d9b5b26db2f3bb14026e 201 SUPERFAMILY SSF46689 15 76 3.09E-16 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JDM601_3866 8dfa2ad15c72d9b5b26db2f3bb14026e 201 Gene3D G3DSA:1.10.357.10 1 200 1.2E-76 T 12-10-2018 JDM601_3296 a1184043aee93582d309cb0fb921b10a 214 SMART SM00448 1 115 4.7E-28 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JDM601_3296 a1184043aee93582d309cb0fb921b10a 214 SUPERFAMILY SSF52172 2 129 2.7E-30 T 12-10-2018 IPR011006 CheY-like superfamily JDM601_3296 a1184043aee93582d309cb0fb921b10a 214 SMART SM00421 150 207 4.2E-20 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JDM601_3296 a1184043aee93582d309cb0fb921b10a 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 167 183 5.9E-12 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JDM601_3296 a1184043aee93582d309cb0fb921b10a 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 153 167 5.9E-12 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JDM601_3296 a1184043aee93582d309cb0fb921b10a 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 183 195 5.9E-12 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JDM601_3296 a1184043aee93582d309cb0fb921b10a 214 Pfam PF00196 Bacterial regulatory proteins, luxR family 152 206 1.3E-16 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JDM601_3296 a1184043aee93582d309cb0fb921b10a 214 Pfam PF00072 Response regulator receiver domain 4 115 2.0E-25 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JDM601_3296 a1184043aee93582d309cb0fb921b10a 214 SUPERFAMILY SSF46894 140 212 2.48E-19 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 JDM601_3296 a1184043aee93582d309cb0fb921b10a 214 Gene3D G3DSA:3.40.50.12740 1 213 8.8E-62 T 12-10-2018 JDM601_3296 a1184043aee93582d309cb0fb921b10a 214 ProSitePatterns PS00622 LuxR-type HTH domain signature. 167 194 - T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JDM601_2462 2cb05bdf777720823bb7ff3057d8d623 327 Pfam PF03060 Nitronate monooxygenase 72 326 9.2E-28 T 12-10-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 JDM601_2462 2cb05bdf777720823bb7ff3057d8d623 327 Pfam PF03060 Nitronate monooxygenase 7 71 1.1E-8 T 12-10-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 JDM601_2462 2cb05bdf777720823bb7ff3057d8d623 327 Gene3D G3DSA:3.20.20.70 1 327 7.6E-70 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JDM601_2462 2cb05bdf777720823bb7ff3057d8d623 327 SUPERFAMILY SSF51412 3 247 9.62E-43 T 12-10-2018 JDM601_2462 2cb05bdf777720823bb7ff3057d8d623 327 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 164 184 - T 12-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 JDM601_2655 ce95e5af1683ac764e03c3beb04072e3 257 SUPERFAMILY SSF102588 2 235 4.45E-43 T 12-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 JDM601_2655 ce95e5af1683ac764e03c3beb04072e3 257 Pfam PF02585 GlcNAc-PI de-N-acetylase 6 137 2.3E-20 T 12-10-2018 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related Reactome: R-HSA-162710 JDM601_2655 ce95e5af1683ac764e03c3beb04072e3 257 Gene3D G3DSA:3.40.50.10320 1 251 3.5E-47 T 12-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 JDM601_0346 fa7b630e68070d5941b711ddbd38c9b7 848 SUPERFAMILY SSF81923 7 155 1.47E-34 T 12-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 JDM601_0346 fa7b630e68070d5941b711ddbd38c9b7 848 SMART SM01086 756 847 9.2E-36 T 12-10-2018 IPR019489 Clp ATPase, C-terminal JDM601_0346 fa7b630e68070d5941b711ddbd38c9b7 848 SUPERFAMILY SSF52540 157 547 1.05E-97 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_0346 fa7b630e68070d5941b711ddbd38c9b7 848 Pfam PF07724 AAA domain (Cdc48 subfamily) 598 749 1.9E-49 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 JDM601_0346 fa7b630e68070d5941b711ddbd38c9b7 848 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 756 835 8.0E-27 T 12-10-2018 IPR019489 Clp ATPase, C-terminal JDM601_0346 fa7b630e68070d5941b711ddbd38c9b7 848 SMART SM00382 198 344 1.7E-7 T 12-10-2018 IPR003593 AAA+ ATPase domain JDM601_0346 fa7b630e68070d5941b711ddbd38c9b7 848 SMART SM00382 599 757 9.7E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain JDM601_0346 fa7b630e68070d5941b711ddbd38c9b7 848 Gene3D G3DSA:3.40.50.300 148 343 1.0E-72 T 12-10-2018 JDM601_0346 fa7b630e68070d5941b711ddbd38c9b7 848 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 7 839 0.0 T 12-10-2018 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0042026 JDM601_0346 fa7b630e68070d5941b711ddbd38c9b7 848 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 295 307 - T 12-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 JDM601_0346 fa7b630e68070d5941b711ddbd38c9b7 848 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 710 724 2.2E-42 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 JDM601_0346 fa7b630e68070d5941b711ddbd38c9b7 848 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 677 695 2.2E-42 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 JDM601_0346 fa7b630e68070d5941b711ddbd38c9b7 848 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 648 666 2.2E-42 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 JDM601_0346 fa7b630e68070d5941b711ddbd38c9b7 848 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 603 621 2.2E-42 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 JDM601_0346 fa7b630e68070d5941b711ddbd38c9b7 848 Gene3D G3DSA:1.10.8.60 756 847 5.4E-28 T 12-10-2018 JDM601_0346 fa7b630e68070d5941b711ddbd38c9b7 848 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 65 1.9E-10 T 12-10-2018 IPR004176 Clp, N-terminal JDM601_0346 fa7b630e68070d5941b711ddbd38c9b7 848 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 94 145 1.8E-10 T 12-10-2018 IPR004176 Clp, N-terminal JDM601_0346 fa7b630e68070d5941b711ddbd38c9b7 848 Gene3D G3DSA:3.40.50.300 344 546 1.3E-72 T 12-10-2018 JDM601_0346 fa7b630e68070d5941b711ddbd38c9b7 848 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 203 317 2.0E-12 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 JDM601_0346 fa7b630e68070d5941b711ddbd38c9b7 848 Gene3D G3DSA:3.40.50.300 552 755 8.8E-82 T 12-10-2018 JDM601_0346 fa7b630e68070d5941b711ddbd38c9b7 848 SUPERFAMILY SSF52540 548 837 2.63E-76 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_0346 fa7b630e68070d5941b711ddbd38c9b7 848 Gene3D G3DSA:1.10.1780.10 5 147 3.0E-28 T 12-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 JDM601_0346 fa7b630e68070d5941b711ddbd38c9b7 848 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 633 651 - T 12-10-2018 IPR028299 ClpA/B, conserved site 2 JDM601_2616 7ff5fc93261c02b7cc056049cfacd408 285 SUPERFAMILY SSF63380 6 131 3.83E-9 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel JDM601_2616 7ff5fc93261c02b7cc056049cfacd408 285 Gene3D G3DSA:3.40.50.80 130 283 9.1E-50 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain JDM601_2616 7ff5fc93261c02b7cc056049cfacd408 285 Pfam PF08021 Siderophore-interacting FAD-binding domain 11 127 1.6E-31 T 12-10-2018 IPR013113 FAD-binding 9, siderophore-interacting JDM601_2616 7ff5fc93261c02b7cc056049cfacd408 285 Gene3D G3DSA:2.40.30.10 3 127 4.5E-29 T 12-10-2018 JDM601_2616 7ff5fc93261c02b7cc056049cfacd408 285 Pfam PF04954 Siderophore-interacting protein 134 261 5.6E-36 T 12-10-2018 IPR007037 Siderophore-interacting protein, C-terminal domain JDM601_3931 56c1e8affa9684389f8fa6286b912674 912 Pfam PF13368 Topoisomerase C-terminal repeat 771 824 1.2E-16 T 12-10-2018 IPR025589 Topoisomerase C-terminal repeat JDM601_3931 56c1e8affa9684389f8fa6286b912674 912 Pfam PF13368 Topoisomerase C-terminal repeat 695 766 1.6E-13 T 12-10-2018 IPR025589 Topoisomerase C-terminal repeat JDM601_3931 56c1e8affa9684389f8fa6286b912674 912 Pfam PF13368 Topoisomerase C-terminal repeat 838 890 2.1E-21 T 12-10-2018 IPR025589 Topoisomerase C-terminal repeat JDM601_3931 56c1e8affa9684389f8fa6286b912674 912 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 4 650 4.5E-257 T 12-10-2018 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 JDM601_3931 56c1e8affa9684389f8fa6286b912674 912 SUPERFAMILY SSF56712 2 589 7.19E-179 T 12-10-2018 IPR023405 DNA topoisomerase, type IA, core domain JDM601_3931 56c1e8affa9684389f8fa6286b912674 912 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 316 330 - T 12-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 JDM601_3931 56c1e8affa9684389f8fa6286b912674 912 SMART SM00493 2 116 7.9E-40 T 12-10-2018 IPR006171 TOPRIM domain JDM601_3931 56c1e8affa9684389f8fa6286b912674 912 SMART SM00437 279 548 8.4E-129 T 12-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 JDM601_3931 56c1e8affa9684389f8fa6286b912674 912 Hamap MF_00952 DNA topoisomerase 1 [topA]. 2 792 55.644 T 12-10-2018 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 JDM601_3931 56c1e8affa9684389f8fa6286b912674 912 Pfam PF01751 Toprim domain 4 125 1.0E-28 T 12-10-2018 IPR006171 TOPRIM domain JDM601_3931 56c1e8affa9684389f8fa6286b912674 912 Gene3D G3DSA:1.10.460.10 147 588 3.0E-182 T 12-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 JDM601_3931 56c1e8affa9684389f8fa6286b912674 912 Gene3D G3DSA:3.40.50.140 1 146 2.9E-58 T 12-10-2018 JDM601_3931 56c1e8affa9684389f8fa6286b912674 912 Pfam PF01131 DNA topoisomerase 140 585 4.6E-119 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 JDM601_3931 56c1e8affa9684389f8fa6286b912674 912 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 400 416 2.3E-34 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 JDM601_3931 56c1e8affa9684389f8fa6286b912674 912 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 90 103 2.3E-34 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 JDM601_3931 56c1e8affa9684389f8fa6286b912674 912 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 511 525 2.3E-34 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 JDM601_3931 56c1e8affa9684389f8fa6286b912674 912 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 174 192 2.3E-34 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 JDM601_3931 56c1e8affa9684389f8fa6286b912674 912 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 321 330 2.3E-34 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 JDM601_3931 56c1e8affa9684389f8fa6286b912674 912 Gene3D G3DSA:1.10.290.10 287 415 3.0E-182 T 12-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 JDM601_3931 56c1e8affa9684389f8fa6286b912674 912 SMART SM00436 116 204 2.4E-48 T 12-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 JDM601_3931 56c1e8affa9684389f8fa6286b912674 912 Gene3D G3DSA:2.70.20.10 196 495 3.0E-182 T 12-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 JDM601_4045 25aec52c318b9f9630dc598f0296384e 412 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 19 370 1.6E-85 T 12-10-2018 IPR017439 Amidohydrolase GO:0016787 JDM601_4045 25aec52c318b9f9630dc598f0296384e 412 Gene3D G3DSA:3.40.630.10 20 366 1.3E-104 T 12-10-2018 JDM601_4045 25aec52c318b9f9630dc598f0296384e 412 PIRSF PIRSF005962 5 412 1.3E-95 T 12-10-2018 IPR017439 Amidohydrolase GO:0016787 JDM601_4045 25aec52c318b9f9630dc598f0296384e 412 SUPERFAMILY SSF55031 187 290 2.36E-27 T 12-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain JDM601_4045 25aec52c318b9f9630dc598f0296384e 412 Pfam PF01546 Peptidase family M20/M25/M40 77 363 2.6E-13 T 12-10-2018 IPR002933 Peptidase M20 GO:0016787 JDM601_4045 25aec52c318b9f9630dc598f0296384e 412 Pfam PF07687 Peptidase dimerisation domain 190 282 3.3E-10 T 12-10-2018 IPR011650 Peptidase M20, dimerisation domain JDM601_4045 25aec52c318b9f9630dc598f0296384e 412 SUPERFAMILY SSF53187 8 409 3.31E-70 T 12-10-2018 JDM601_4045 25aec52c318b9f9630dc598f0296384e 412 Gene3D G3DSA:3.30.70.360 186 304 1.3E-104 T 12-10-2018 JDM601_3297 46356b101e8ae935af7a96e2a7a181a8 428 SMART SM00387 314 414 3.0E-6 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JDM601_3297 46356b101e8ae935af7a96e2a7a181a8 428 SUPERFAMILY SSF55874 290 411 8.76E-16 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JDM601_3297 46356b101e8ae935af7a96e2a7a181a8 428 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 316 412 8.6E-8 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JDM601_3297 46356b101e8ae935af7a96e2a7a181a8 428 SUPERFAMILY SSF55781 47 195 1.31E-25 T 12-10-2018 JDM601_3297 46356b101e8ae935af7a96e2a7a181a8 428 Pfam PF07730 Histidine kinase 214 281 2.6E-16 T 12-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 JDM601_3297 46356b101e8ae935af7a96e2a7a181a8 428 Gene3D G3DSA:3.30.450.40 25 195 8.4E-34 T 12-10-2018 IPR029016 GAF-like domain superfamily JDM601_3297 46356b101e8ae935af7a96e2a7a181a8 428 Gene3D G3DSA:3.30.565.10 286 412 6.3E-28 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JDM601_3297 46356b101e8ae935af7a96e2a7a181a8 428 Pfam PF13185 GAF domain 58 184 3.6E-17 T 12-10-2018 IPR003018 GAF domain GO:0005515 JDM601_3297 46356b101e8ae935af7a96e2a7a181a8 428 SMART SM00065 45 194 7.3E-16 T 12-10-2018 IPR003018 GAF domain GO:0005515 JDM601_3653 483846b285f435c200e382902b735928 214 SUPERFAMILY SSF160104 1 212 5.36E-40 T 12-10-2018 IPR023375 Acetoacetate decarboxylase domain superfamily KEGG: 00072+4.1.1.4|KEGG: 00640+4.1.1.4|MetaCyc: PWY-5451|MetaCyc: PWY-6588|MetaCyc: PWY-6876|MetaCyc: PWY-7466 JDM601_3653 483846b285f435c200e382902b735928 214 Gene3D G3DSA:2.40.400.10 1 213 1.5E-19 T 12-10-2018 IPR023375 Acetoacetate decarboxylase domain superfamily KEGG: 00072+4.1.1.4|KEGG: 00640+4.1.1.4|MetaCyc: PWY-5451|MetaCyc: PWY-6588|MetaCyc: PWY-6876|MetaCyc: PWY-7466 JDM601_3653 483846b285f435c200e382902b735928 214 Pfam PF06314 Acetoacetate decarboxylase (ADC) 1 205 6.9E-41 T 12-10-2018 IPR010451 Acetoacetate decarboxylase GO:0016829 KEGG: 00072+4.1.1.4|KEGG: 00640+4.1.1.4|MetaCyc: PWY-5451|MetaCyc: PWY-6588|MetaCyc: PWY-6876|MetaCyc: PWY-7466 JDM601_2221 688927827dbb27cd645e80a9ae077326 772 SUPERFAMILY SSF52242 587 748 1.31E-57 T 12-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 JDM601_2221 688927827dbb27cd645e80a9ae077326 772 Gene3D G3DSA:3.40.50.280 587 749 4.8E-54 T 12-10-2018 JDM601_2221 688927827dbb27cd645e80a9ae077326 772 TIGRFAM TIGR00640 acid_CoA_mut_C: methylmalonyl-CoA mutase C-terminal domain 620 748 9.1E-62 T 12-10-2018 IPR006159 Methylmalonyl-CoA mutase, C-terminal GO:0016853 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 JDM601_2221 688927827dbb27cd645e80a9ae077326 772 Gene3D G3DSA:3.20.20.240 55 583 2.7E-236 T 12-10-2018 JDM601_2221 688927827dbb27cd645e80a9ae077326 772 SUPERFAMILY SSF51703 42 583 3.92E-215 T 12-10-2018 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic GO:0003824|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 JDM601_2221 688927827dbb27cd645e80a9ae077326 772 TIGRFAM TIGR00641 acid_CoA_mut_N: methylmalonyl-CoA mutase N-terminal domain 55 588 3.2E-285 T 12-10-2018 IPR006098 Methylmalonyl-CoA mutase, alpha chain, catalytic GO:0004494|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 JDM601_2221 688927827dbb27cd645e80a9ae077326 772 Pfam PF01642 Methylmalonyl-CoA mutase 57 581 2.1E-232 T 12-10-2018 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic GO:0016866|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 JDM601_2221 688927827dbb27cd645e80a9ae077326 772 Pfam PF02310 B12 binding domain 623 737 3.9E-15 T 12-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 JDM601_2221 688927827dbb27cd645e80a9ae077326 772 ProSitePatterns PS00544 Methylmalonyl-CoA mutase signature. 402 427 - T 12-10-2018 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic GO:0016866|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 JDM601_0720 64fe8775d3816df505b8158011b88a7c 216 Gene3D G3DSA:1.10.10.60 7 74 1.1E-8 T 12-10-2018 JDM601_0720 64fe8775d3816df505b8158011b88a7c 216 Gene3D G3DSA:1.10.357.10 75 216 8.2E-16 T 12-10-2018 JDM601_0720 64fe8775d3816df505b8158011b88a7c 216 SUPERFAMILY SSF46689 21 105 7.18E-14 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JDM601_0720 64fe8775d3816df505b8158011b88a7c 216 Pfam PF00440 Bacterial regulatory proteins, tetR family 34 79 3.2E-7 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_0720 64fe8775d3816df505b8158011b88a7c 216 SUPERFAMILY SSF48498 101 215 5.72E-9 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily JDM601_4117 182071c699095435229fa6a17fb30bc4 1788 Gene3D G3DSA:1.10.1200.10 1241 1323 2.1E-9 T 12-10-2018 IPR036736 ACP-like superfamily JDM601_4117 182071c699095435229fa6a17fb30bc4 1788 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 119 367 1.3E-80 T 12-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal JDM601_4117 182071c699095435229fa6a17fb30bc4 1788 SUPERFAMILY SSF55048 848 905 1.07E-6 T 12-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding JDM601_4117 182071c699095435229fa6a17fb30bc4 1788 SUPERFAMILY SSF53901 117 541 4.94E-91 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 JDM601_4117 182071c699095435229fa6a17fb30bc4 1788 Gene3D G3DSA:3.30.70.250 839 908 9.8E-129 T 12-10-2018 JDM601_4117 182071c699095435229fa6a17fb30bc4 1788 Gene3D G3DSA:1.10.1200.10 16 98 1.3E-19 T 12-10-2018 IPR036736 ACP-like superfamily JDM601_4117 182071c699095435229fa6a17fb30bc4 1788 Pfam PF00975 Thioesterase domain 1533 1627 4.2E-17 T 12-10-2018 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 JDM601_4117 182071c699095435229fa6a17fb30bc4 1788 SMART SM00825 Beta-ketoacyl synthase 120 545 1.2E-185 T 12-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain JDM601_4117 182071c699095435229fa6a17fb30bc4 1788 Gene3D G3DSA:3.40.50.1820 1523 1787 6.0E-40 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_4117 182071c699095435229fa6a17fb30bc4 1788 SUPERFAMILY SSF53474 1528 1781 8.43E-45 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_4117 182071c699095435229fa6a17fb30bc4 1788 SUPERFAMILY SSF47336 23 131 2.62E-14 T 12-10-2018 IPR036736 ACP-like superfamily JDM601_4117 182071c699095435229fa6a17fb30bc4 1788 Gene3D G3DSA:3.40.366.20 624 1043 9.8E-129 T 12-10-2018 JDM601_4117 182071c699095435229fa6a17fb30bc4 1788 Gene3D G3DSA:3.40.47.10 109 562 1.2E-174 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 JDM601_4117 182071c699095435229fa6a17fb30bc4 1788 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 711 1022 2.6E-69 T 12-10-2018 IPR020801 Polyketide synthase, acyl transferase domain JDM601_4117 182071c699095435229fa6a17fb30bc4 1788 SMART SM00823 Phosphopantetheine attachment site 28 99 1.5E-7 T 12-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 JDM601_4117 182071c699095435229fa6a17fb30bc4 1788 SMART SM00823 Phosphopantetheine attachment site 1244 1299 7.3E-4 T 12-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 JDM601_4117 182071c699095435229fa6a17fb30bc4 1788 Pfam PF00698 Acyl transferase domain 709 1039 7.6E-48 T 12-10-2018 IPR014043 Acyl transferase JDM601_4117 182071c699095435229fa6a17fb30bc4 1788 SUPERFAMILY SSF52151 709 1001 4.19E-43 T 12-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase JDM601_4117 182071c699095435229fa6a17fb30bc4 1788 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 375 492 2.6E-44 T 12-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal JDM601_4117 182071c699095435229fa6a17fb30bc4 1788 SUPERFAMILY SSF47336 1241 1319 1.44E-10 T 12-10-2018 IPR036736 ACP-like superfamily JDM601_4117 182071c699095435229fa6a17fb30bc4 1788 Pfam PF00550 Phosphopantetheine attachment site 30 94 1.2E-9 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain JDM601_4117 182071c699095435229fa6a17fb30bc4 1788 Pfam PF00550 Phosphopantetheine attachment site 1246 1292 2.3E-6 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain JDM601_4117 182071c699095435229fa6a17fb30bc4 1788 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 495 545 7.6E-10 T 12-10-2018 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 JDM601_2962 39e7367b310d2e49bea5e377eac3008e 557 Pfam PF00069 Protein kinase domain 37 289 9.7E-45 T 12-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 JDM601_2962 39e7367b310d2e49bea5e377eac3008e 557 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 158 170 - T 12-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 JDM601_2962 39e7367b310d2e49bea5e377eac3008e 557 SUPERFAMILY SSF56112 35 300 2.1E-70 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily JDM601_2962 39e7367b310d2e49bea5e377eac3008e 557 Gene3D G3DSA:3.30.200.20 26 116 1.3E-34 T 12-10-2018 JDM601_2962 39e7367b310d2e49bea5e377eac3008e 557 Gene3D G3DSA:1.10.510.10 117 314 3.7E-41 T 12-10-2018 JDM601_2962 39e7367b310d2e49bea5e377eac3008e 557 SMART SM00220 37 300 1.2E-60 T 12-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 JDM601_1387 c8f6bf703132bcd5137c0d30502dba3e 161 Gene3D G3DSA:3.40.30.10 8 160 8.6E-49 T 12-10-2018 JDM601_1387 c8f6bf703132bcd5137c0d30502dba3e 161 PIRSF PIRSF000239 6 159 3.6E-19 T 12-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 JDM601_1387 c8f6bf703132bcd5137c0d30502dba3e 161 SUPERFAMILY SSF52833 11 159 1.66E-48 T 12-10-2018 IPR036249 Thioredoxin-like superfamily JDM601_1387 c8f6bf703132bcd5137c0d30502dba3e 161 Pfam PF00578 AhpC/TSA family 14 140 2.8E-40 T 12-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 JDM601_2150 6cc134b4fbd9dfe65edab79eed131128 292 SUPERFAMILY SSF51690 121 292 7.06E-54 T 12-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 JDM601_2150 6cc134b4fbd9dfe65edab79eed131128 292 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 121 291 6.2E-59 T 12-10-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 Reactome: R-HSA-196807 JDM601_2150 6cc134b4fbd9dfe65edab79eed131128 292 Gene3D G3DSA:3.20.20.70 125 283 2.3E-101 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JDM601_2150 6cc134b4fbd9dfe65edab79eed131128 292 PIRSF PIRSF006250 9 292 2.5E-103 T 12-10-2018 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD Reactome: R-HSA-196807 JDM601_2150 6cc134b4fbd9dfe65edab79eed131128 292 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 31 119 1.7E-19 T 12-10-2018 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 JDM601_2150 6cc134b4fbd9dfe65edab79eed131128 292 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 19 292 1.4E-94 T 12-10-2018 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|Reactome: R-HSA-196807 JDM601_2150 6cc134b4fbd9dfe65edab79eed131128 292 SUPERFAMILY SSF54675 15 120 8.24E-27 T 12-10-2018 JDM601_2150 6cc134b4fbd9dfe65edab79eed131128 292 Gene3D G3DSA:3.90.1170.20 23 290 2.3E-101 T 12-10-2018 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily GO:0016763 Reactome: R-HSA-196807 JDM601_4274 f521a916b2fcb2a94f7b238cfaa04234 515 SUPERFAMILY SSF56425 285 453 2.39E-31 T 12-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 JDM601_4274 f521a916b2fcb2a94f7b238cfaa04234 515 Pfam PF00890 FAD binding domain 9 493 1.1E-87 T 12-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 JDM601_4274 f521a916b2fcb2a94f7b238cfaa04234 515 Gene3D G3DSA:3.90.700.10 298 442 2.8E-151 T 12-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 JDM601_4274 f521a916b2fcb2a94f7b238cfaa04234 515 Gene3D G3DSA:3.50.50.60 8 505 2.8E-151 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_4274 f521a916b2fcb2a94f7b238cfaa04234 515 SUPERFAMILY SSF51905 2 509 4.58E-29 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_1914 f382af0baccc908aa61ca0a2847a7c59 485 Gene3D G3DSA:3.50.50.60 20 477 1.1E-140 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_1914 f382af0baccc908aa61ca0a2847a7c59 485 Pfam PF00890 FAD binding domain 22 453 9.0E-51 T 12-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 JDM601_1914 f382af0baccc908aa61ca0a2847a7c59 485 Gene3D G3DSA:3.90.700.10 291 414 1.1E-140 T 12-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 JDM601_1914 f382af0baccc908aa61ca0a2847a7c59 485 SUPERFAMILY SSF51905 16 482 5.25E-48 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_1914 f382af0baccc908aa61ca0a2847a7c59 485 SUPERFAMILY SSF56425 295 424 1.08E-25 T 12-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 JDM601_1914 f382af0baccc908aa61ca0a2847a7c59 485 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 440 455 1.4E-5 T 12-10-2018 JDM601_1914 f382af0baccc908aa61ca0a2847a7c59 485 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 22 44 1.4E-5 T 12-10-2018 JDM601_1086 b99181dd799e0175c51ccf74dd4f12b6 292 Pfam PF00378 Enoyl-CoA hydratase/isomerase 11 276 3.7E-44 T 12-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 JDM601_1086 b99181dd799e0175c51ccf74dd4f12b6 292 Gene3D G3DSA:1.10.12.10 222 277 1.7E-5 T 12-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal JDM601_1086 b99181dd799e0175c51ccf74dd4f12b6 292 SUPERFAMILY SSF52096 1 277 1.61E-70 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily JDM601_1086 b99181dd799e0175c51ccf74dd4f12b6 292 Gene3D G3DSA:3.90.226.10 1 215 9.4E-62 T 12-10-2018 JDM601_3079 8581e1bb35b32bda55c75fcea2048e4d 404 Pfam PF00534 Glycosyl transferases group 1 200 366 3.8E-40 T 12-10-2018 IPR001296 Glycosyl transferase, family 1 JDM601_3079 8581e1bb35b32bda55c75fcea2048e4d 404 Gene3D G3DSA:3.40.50.2000 1 384 1.5E-123 T 12-10-2018 JDM601_3079 8581e1bb35b32bda55c75fcea2048e4d 404 Gene3D G3DSA:3.40.50.2000 189 367 1.5E-123 T 12-10-2018 JDM601_3079 8581e1bb35b32bda55c75fcea2048e4d 404 SUPERFAMILY SSF53756 16 388 8.57E-91 T 12-10-2018 JDM601_3079 8581e1bb35b32bda55c75fcea2048e4d 404 Pfam PF13439 Glycosyltransferase Family 4 17 193 2.2E-35 T 12-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 JDM601_1815 0f2181b8f9ae81edeaaed7e1162b7997 144 Hamap MF_00265 tRNA(fMet)-specific endonuclease VapC [vapC]. 3 135 11.759 T 12-10-2018 IPR022907 VapC family GO:0004540 JDM601_1815 0f2181b8f9ae81edeaaed7e1162b7997 144 Gene3D G3DSA:3.40.50.1010 2 132 1.4E-17 T 12-10-2018 JDM601_1815 0f2181b8f9ae81edeaaed7e1162b7997 144 SUPERFAMILY SSF88723 1 130 3.36E-18 T 12-10-2018 IPR029060 PIN-like domain superfamily JDM601_1815 0f2181b8f9ae81edeaaed7e1162b7997 144 Pfam PF01850 PIN domain 4 129 4.1E-14 T 12-10-2018 IPR002716 PIN domain JDM601_1725 1b4e1577a369985ca808ede50b46334e 461 TIGRFAM TIGR01358 DAHP_synth_II: 3-deoxy-7-phosphoheptulonate synthase 26 460 6.2E-215 T 12-10-2018 IPR002480 DAHP synthetase, class II GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 JDM601_1725 1b4e1577a369985ca808ede50b46334e 461 Gene3D G3DSA:3.20.20.70 221 461 2.9E-108 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JDM601_1725 1b4e1577a369985ca808ede50b46334e 461 Gene3D G3DSA:3.20.20.70 56 220 1.1E-52 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JDM601_1725 1b4e1577a369985ca808ede50b46334e 461 Pfam PF01474 Class-II DAHP synthetase family 31 456 8.1E-184 T 12-10-2018 IPR002480 DAHP synthetase, class II GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 JDM601_1725 1b4e1577a369985ca808ede50b46334e 461 SUPERFAMILY SSF51569 7 460 3.66E-187 T 12-10-2018 JDM601_1988 2a19579305cd6230648004c3264ca442 424 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 283 421 6.4E-43 T 12-10-2018 IPR008136 CinA, C-terminal JDM601_1988 2a19579305cd6230648004c3264ca442 424 Pfam PF02464 Competence-damaged protein 280 421 1.4E-52 T 12-10-2018 IPR008136 CinA, C-terminal JDM601_1988 2a19579305cd6230648004c3264ca442 424 TIGRFAM TIGR00200 cinA_nterm: competence/damage-inducible protein CinA N-terminal domain 4 422 1.4E-73 T 12-10-2018 IPR008135 Competence-induced protein CinA JDM601_1988 2a19579305cd6230648004c3264ca442 424 SMART SM00852 6 183 5.3E-39 T 12-10-2018 IPR001453 MoaB/Mog domain JDM601_1988 2a19579305cd6230648004c3264ca442 424 SUPERFAMILY SSF53218 4 214 1.44E-35 T 12-10-2018 IPR036425 MoaB/Mog-like domain superfamily JDM601_1988 2a19579305cd6230648004c3264ca442 424 Gene3D G3DSA:3.40.980.10 2 180 1.4E-46 T 12-10-2018 IPR036425 MoaB/Mog-like domain superfamily JDM601_1988 2a19579305cd6230648004c3264ca442 424 Gene3D G3DSA:3.90.950.20 260 422 8.3E-54 T 12-10-2018 IPR036653 CinA-like, C-terminal JDM601_1988 2a19579305cd6230648004c3264ca442 424 PIRSF PIRSF006728 2 424 3.8E-118 T 12-10-2018 IPR008135 Competence-induced protein CinA JDM601_1988 2a19579305cd6230648004c3264ca442 424 SUPERFAMILY SSF142433 280 421 6.28E-52 T 12-10-2018 IPR036653 CinA-like, C-terminal JDM601_1988 2a19579305cd6230648004c3264ca442 424 Hamap MF_00226_B Putative competence-damage inducible protein [cinA]. 1 424 133.955 T 12-10-2018 IPR008135 Competence-induced protein CinA JDM601_1988 2a19579305cd6230648004c3264ca442 424 Pfam PF00994 Probable molybdopterin binding domain 6 176 7.4E-35 T 12-10-2018 IPR001453 MoaB/Mog domain JDM601_3478 7eba592c317f1a0f1a4d01f7717ea28d 504 SUPERFAMILY SSF53720 23 496 2.23E-143 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 JDM601_3478 7eba592c317f1a0f1a4d01f7717ea28d 504 Gene3D G3DSA:3.40.309.10 278 465 1.3E-158 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 JDM601_3478 7eba592c317f1a0f1a4d01f7717ea28d 504 Gene3D G3DSA:3.40.605.10 39 495 1.3E-158 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 JDM601_3478 7eba592c317f1a0f1a4d01f7717ea28d 504 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 274 281 - T 12-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 JDM601_3478 7eba592c317f1a0f1a4d01f7717ea28d 504 Pfam PF00171 Aldehyde dehydrogenase family 38 495 4.2E-146 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 JDM601_1447 0195179ab399794d016f8f1fb37179dd 192 Gene3D G3DSA:3.90.226.10 2 191 5.6E-73 T 12-10-2018 JDM601_1447 0195179ab399794d016f8f1fb37179dd 192 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 2 185 38.084 T 12-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 JDM601_1447 0195179ab399794d016f8f1fb37179dd 192 Pfam PF00574 Clp protease 10 184 2.1E-75 T 12-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA JDM601_1447 0195179ab399794d016f8f1fb37179dd 192 SUPERFAMILY SSF52096 11 184 1.07E-64 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily JDM601_1447 0195179ab399794d016f8f1fb37179dd 192 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 104 117 - T 12-10-2018 IPR033135 ClpP, histidine active site JDM601_1447 0195179ab399794d016f8f1fb37179dd 192 PRINTS PR00127 Clp protease catalytic subunit P signature 11 26 1.6E-48 T 12-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 JDM601_1447 0195179ab399794d016f8f1fb37179dd 192 PRINTS PR00127 Clp protease catalytic subunit P signature 51 71 1.6E-48 T 12-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 JDM601_1447 0195179ab399794d016f8f1fb37179dd 192 PRINTS PR00127 Clp protease catalytic subunit P signature 103 122 1.6E-48 T 12-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 JDM601_1447 0195179ab399794d016f8f1fb37179dd 192 PRINTS PR00127 Clp protease catalytic subunit P signature 160 179 1.6E-48 T 12-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 JDM601_1447 0195179ab399794d016f8f1fb37179dd 192 PRINTS PR00127 Clp protease catalytic subunit P signature 82 99 1.6E-48 T 12-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 JDM601_0567 dc788261cc26e25874ecddddb04eee99 359 Gene3D G3DSA:3.30.70.890 180 335 1.2E-116 T 12-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily JDM601_0567 dc788261cc26e25874ecddddb04eee99 359 Gene3D G3DSA:3.30.230.10 4 179 1.2E-116 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup JDM601_0567 dc788261cc26e25874ecddddb04eee99 359 Pfam PF08544 GHMP kinases C terminal 262 328 2.3E-9 T 12-10-2018 IPR013750 GHMP kinase, C-terminal domain JDM601_0567 dc788261cc26e25874ecddddb04eee99 359 SUPERFAMILY SSF54211 4 181 2.96E-53 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold JDM601_0567 dc788261cc26e25874ecddddb04eee99 359 PRINTS PR00473 Galactokinase signature 244 258 1.6E-24 T 12-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 JDM601_0567 dc788261cc26e25874ecddddb04eee99 359 PRINTS PR00473 Galactokinase signature 90 108 1.6E-24 T 12-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 JDM601_0567 dc788261cc26e25874ecddddb04eee99 359 PRINTS PR00473 Galactokinase signature 70 81 1.6E-24 T 12-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 JDM601_0567 dc788261cc26e25874ecddddb04eee99 359 PRINTS PR00473 Galactokinase signature 8 26 1.6E-24 T 12-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 JDM601_0567 dc788261cc26e25874ecddddb04eee99 359 PRINTS PR00959 Mevalonate kinase family signature 6 30 2.6E-43 T 12-10-2018 JDM601_0567 dc788261cc26e25874ecddddb04eee99 359 PRINTS PR00959 Mevalonate kinase family signature 140 159 2.6E-43 T 12-10-2018 JDM601_0567 dc788261cc26e25874ecddddb04eee99 359 PRINTS PR00959 Mevalonate kinase family signature 97 119 2.6E-43 T 12-10-2018 JDM601_0567 dc788261cc26e25874ecddddb04eee99 359 PRINTS PR00959 Mevalonate kinase family signature 307 324 2.6E-43 T 12-10-2018 JDM601_0567 dc788261cc26e25874ecddddb04eee99 359 PIRSF PIRSF000530 2 359 1.9E-102 T 12-10-2018 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 JDM601_0567 dc788261cc26e25874ecddddb04eee99 359 ProSitePatterns PS00106 Galactokinase signature. 8 19 - T 12-10-2018 IPR019741 Galactokinase, conserved site KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 JDM601_0567 dc788261cc26e25874ecddddb04eee99 359 TIGRFAM TIGR00131 gal_kin: galactokinase 5 335 2.4E-78 T 12-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 JDM601_0567 dc788261cc26e25874ecddddb04eee99 359 SUPERFAMILY SSF55060 186 358 3.68E-43 T 12-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily JDM601_0567 dc788261cc26e25874ecddddb04eee99 359 Pfam PF10509 Galactokinase galactose-binding signature 4 37 8.3E-17 T 12-10-2018 IPR019539 Galactokinase galactose-binding domain GO:0005534 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 JDM601_0567 dc788261cc26e25874ecddddb04eee99 359 Pfam PF00288 GHMP kinases N terminal domain 94 160 7.3E-15 T 12-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 JDM601_0567 dc788261cc26e25874ecddddb04eee99 359 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 99 110 - T 12-10-2018 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 JDM601_2479 f03d98f1c05e3214d649895156c39be2 225 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 31 217 4.3E-9 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 JDM601_2479 f03d98f1c05e3214d649895156c39be2 225 SUPERFAMILY SSF161098 8 207 3.92E-31 T 12-10-2018 IPR035906 MetI-like superfamily JDM601_2479 f03d98f1c05e3214d649895156c39be2 225 Gene3D G3DSA:1.10.3720.10 1 223 3.9E-36 T 12-10-2018 IPR035906 MetI-like superfamily JDM601_2479 f03d98f1c05e3214d649895156c39be2 225 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 9 116 2.8E-13 T 12-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 JDM601_3778 bc8d68d07258e797986292f3f6322c3f 353 ProSitePatterns PS00482 Dihydroorotase signature 1. 321 329 - T 12-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 JDM601_3778 bc8d68d07258e797986292f3f6322c3f 353 SUPERFAMILY SSF56645 1 168 1.7E-26 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 JDM601_3778 bc8d68d07258e797986292f3f6322c3f 353 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 219 350 4.2E-27 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 JDM601_3778 bc8d68d07258e797986292f3f6322c3f 353 Gene3D G3DSA:2.40.110.10 119 216 1.1E-7 T 12-10-2018 JDM601_3778 bc8d68d07258e797986292f3f6322c3f 353 Gene3D G3DSA:1.20.140.10 217 352 1.2E-38 T 12-10-2018 JDM601_3778 bc8d68d07258e797986292f3f6322c3f 353 Gene3D G3DSA:1.10.540.10 2 115 4.3E-23 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 JDM601_3778 bc8d68d07258e797986292f3f6322c3f 353 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 112 7.7E-18 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 JDM601_3778 bc8d68d07258e797986292f3f6322c3f 353 SUPERFAMILY SSF47203 218 351 2.54E-37 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 JDM601_0707 4228f5e5703de90cd83aafe470116f2f 498 SUPERFAMILY SSF52096 7 246 1.32E-56 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily JDM601_0707 4228f5e5703de90cd83aafe470116f2f 498 Pfam PF01039 Carboxyl transferase domain 33 472 9.0E-85 T 12-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 JDM601_0707 4228f5e5703de90cd83aafe470116f2f 498 Gene3D G3DSA:3.90.226.10 249 495 1.6E-57 T 12-10-2018 JDM601_0707 4228f5e5703de90cd83aafe470116f2f 498 Gene3D G3DSA:3.90.226.10 1 241 9.6E-68 T 12-10-2018 JDM601_0707 4228f5e5703de90cd83aafe470116f2f 498 SUPERFAMILY SSF52096 215 478 4.83E-59 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily JDM601_1016 9eaaf867c2124a4ccd01241647e2802e 257 SUPERFAMILY SSF52096 1 256 9.67E-92 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily JDM601_1016 9eaaf867c2124a4ccd01241647e2802e 257 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 98 118 - T 12-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 JDM601_1016 9eaaf867c2124a4ccd01241647e2802e 257 Gene3D G3DSA:1.10.12.10 200 256 4.4E-27 T 12-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal JDM601_1016 9eaaf867c2124a4ccd01241647e2802e 257 Pfam PF00378 Enoyl-CoA hydratase/isomerase 12 256 7.4E-81 T 12-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 JDM601_1016 9eaaf867c2124a4ccd01241647e2802e 257 Gene3D G3DSA:3.90.226.10 2 199 1.3E-81 T 12-10-2018 JDM601_4331 1ec35a08bea2f99d9b4875c4ee313cb4 482 TIGRFAM TIGR02692 tRNA_CCA_actino: CCA tRNA nucleotidyltransferase 11 477 1.6E-249 T 12-10-2018 IPR014065 tRNA adenylyltransferase JDM601_4331 1ec35a08bea2f99d9b4875c4ee313cb4 482 Pfam PF01966 HD domain 268 387 3.8E-16 T 12-10-2018 IPR006674 HD domain JDM601_4331 1ec35a08bea2f99d9b4875c4ee313cb4 482 Pfam PF01743 Poly A polymerase head domain 39 165 1.1E-34 T 12-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 JDM601_4331 1ec35a08bea2f99d9b4875c4ee313cb4 482 SMART SM00471 264 432 3.0E-5 T 12-10-2018 IPR003607 HD/PDEase domain JDM601_4331 1ec35a08bea2f99d9b4875c4ee313cb4 482 Gene3D G3DSA:1.10.3090.10 169 462 4.2E-44 T 12-10-2018 JDM601_4331 1ec35a08bea2f99d9b4875c4ee313cb4 482 TIGRFAM TIGR00277 HDIG: HDIG domain 265 347 2.4E-21 T 12-10-2018 IPR006675 HDIG domain JDM601_4331 1ec35a08bea2f99d9b4875c4ee313cb4 482 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 193 252 7.5E-18 T 12-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 JDM601_4331 1ec35a08bea2f99d9b4875c4ee313cb4 482 SUPERFAMILY SSF81891 165 478 4.32E-64 T 12-10-2018 JDM601_4331 1ec35a08bea2f99d9b4875c4ee313cb4 482 Gene3D G3DSA:3.30.460.10 12 162 2.7E-37 T 12-10-2018 JDM601_4331 1ec35a08bea2f99d9b4875c4ee313cb4 482 SUPERFAMILY SSF81301 21 162 9.37E-36 T 12-10-2018 JDM601_3075 e3971b1965d995fcbba335d69cd535f1 196 Gene3D G3DSA:1.10.10.10 120 178 5.3E-8 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JDM601_3075 e3971b1965d995fcbba335d69cd535f1 196 SUPERFAMILY SSF52172 123 171 7.95E-5 T 12-10-2018 IPR011006 CheY-like superfamily JDM601_3075 e3971b1965d995fcbba335d69cd535f1 196 SMART SM01012 118 173 8.7E-20 T 12-10-2018 IPR005561 ANTAR domain GO:0003723 JDM601_3075 e3971b1965d995fcbba335d69cd535f1 196 SUPERFAMILY SSF55785 20 112 1.27E-12 T 12-10-2018 IPR035965 PAS domain superfamily JDM601_3075 e3971b1965d995fcbba335d69cd535f1 196 Pfam PF08447 PAS fold 21 106 1.9E-11 T 12-10-2018 IPR013655 PAS fold-3 GO:0005515 JDM601_3075 e3971b1965d995fcbba335d69cd535f1 196 Gene3D G3DSA:3.30.450.20 8 111 4.7E-16 T 12-10-2018 JDM601_3075 e3971b1965d995fcbba335d69cd535f1 196 Pfam PF03861 ANTAR domain 124 171 1.8E-17 T 12-10-2018 IPR005561 ANTAR domain GO:0003723 JDM601_3075 e3971b1965d995fcbba335d69cd535f1 196 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 22 116 1.5E-6 T 12-10-2018 IPR000014 PAS domain JDM601_0963 b4f5ffd351d3f94fa8a90f49d3a95438 516 SUPERFAMILY SSF52374 6 357 2.95E-112 T 12-10-2018 JDM601_0963 b4f5ffd351d3f94fa8a90f49d3a95438 516 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 16 25 - T 12-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 JDM601_0963 b4f5ffd351d3f94fa8a90f49d3a95438 516 SUPERFAMILY SSF47323 355 513 8.22E-35 T 12-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 JDM601_0963 b4f5ffd351d3f94fa8a90f49d3a95438 516 PRINTS PR01041 Methionyl-tRNA synthetase signature 262 277 1.3E-33 T 12-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 JDM601_0963 b4f5ffd351d3f94fa8a90f49d3a95438 516 PRINTS PR01041 Methionyl-tRNA synthetase signature 41 55 1.3E-33 T 12-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 JDM601_0963 b4f5ffd351d3f94fa8a90f49d3a95438 516 PRINTS PR01041 Methionyl-tRNA synthetase signature 89 100 1.3E-33 T 12-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 JDM601_0963 b4f5ffd351d3f94fa8a90f49d3a95438 516 PRINTS PR01041 Methionyl-tRNA synthetase signature 354 365 1.3E-33 T 12-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 JDM601_0963 b4f5ffd351d3f94fa8a90f49d3a95438 516 PRINTS PR01041 Methionyl-tRNA synthetase signature 9 22 1.3E-33 T 12-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 JDM601_0963 b4f5ffd351d3f94fa8a90f49d3a95438 516 PRINTS PR01041 Methionyl-tRNA synthetase signature 229 240 1.3E-33 T 12-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 JDM601_0963 b4f5ffd351d3f94fa8a90f49d3a95438 516 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 7 487 3.3E-146 T 12-10-2018 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 JDM601_0963 b4f5ffd351d3f94fa8a90f49d3a95438 516 Gene3D G3DSA:2.170.220.10 118 231 1.2E-151 T 12-10-2018 JDM601_0963 b4f5ffd351d3f94fa8a90f49d3a95438 516 Pfam PF09334 tRNA synthetases class I (M) 7 366 1.9E-108 T 12-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 JDM601_0963 b4f5ffd351d3f94fa8a90f49d3a95438 516 Gene3D G3DSA:1.10.730.10 343 515 2.8E-49 T 12-10-2018 JDM601_0963 b4f5ffd351d3f94fa8a90f49d3a95438 516 Gene3D G3DSA:3.40.50.620 7 339 1.2E-151 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JDM601_0963 b4f5ffd351d3f94fa8a90f49d3a95438 516 Hamap MF_01228 Methionine--tRNA ligase [metG]. 1 515 46.739 T 12-10-2018 IPR023457 Methionine-tRNA synthetase, type 2 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 JDM601_1198 a38331d8499c5559567f433645d6818d 127 TIGRFAM TIGR01410 tatB: twin arginine-targeting protein translocase TatB 4 84 4.7E-24 T 12-10-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 JDM601_1198 a38331d8499c5559567f433645d6818d 127 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 22 41 1.2E-12 T 12-10-2018 JDM601_1198 a38331d8499c5559567f433645d6818d 127 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 2 22 1.2E-12 T 12-10-2018 JDM601_1198 a38331d8499c5559567f433645d6818d 127 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 41 59 1.2E-12 T 12-10-2018 JDM601_1198 a38331d8499c5559567f433645d6818d 127 Hamap MF_00237 Sec-independent protein translocase protein TatB [tatB]. 2 127 14.858 T 12-10-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 JDM601_4195 b05d2e87116f4a75d038397573e45cc4 428 Gene3D G3DSA:1.20.1260.20 2 174 5.8E-62 T 12-10-2018 IPR038332 PPE superfamily JDM601_4195 b05d2e87116f4a75d038397573e45cc4 428 SUPERFAMILY SSF140459 3 172 1.39E-58 T 12-10-2018 JDM601_4195 b05d2e87116f4a75d038397573e45cc4 428 Pfam PF00823 PPE family 6 161 8.0E-56 T 12-10-2018 IPR000030 PPE family JDM601_4195 b05d2e87116f4a75d038397573e45cc4 428 Pfam PF12484 Polymorphic PE/PPE proteins C terminal 271 335 4.4E-8 T 12-10-2018 IPR022171 PPE family, C-terminal JDM601_2944 b3a4d50d93bf90c14a33e3bd95714a94 384 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 124 221 1.9E-24 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 JDM601_2944 b3a4d50d93bf90c14a33e3bd95714a94 384 Gene3D G3DSA:1.10.540.10 1 121 3.2E-32 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 JDM601_2944 b3a4d50d93bf90c14a33e3bd95714a94 384 SUPERFAMILY SSF47203 232 382 3.87E-47 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 JDM601_2944 b3a4d50d93bf90c14a33e3bd95714a94 384 SUPERFAMILY SSF56645 3 246 1.06E-76 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 JDM601_2944 b3a4d50d93bf90c14a33e3bd95714a94 384 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 234 382 5.0E-41 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 JDM601_2944 b3a4d50d93bf90c14a33e3bd95714a94 384 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 120 1.9E-30 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 JDM601_2944 b3a4d50d93bf90c14a33e3bd95714a94 384 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 341 360 - T 12-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 JDM601_2944 b3a4d50d93bf90c14a33e3bd95714a94 384 Gene3D G3DSA:1.20.140.10 240 384 6.9E-44 T 12-10-2018 JDM601_2944 b3a4d50d93bf90c14a33e3bd95714a94 384 Gene3D G3DSA:2.40.110.10 124 239 7.3E-39 T 12-10-2018 JDM601_1033 2c5fdd966939d3789864bff7e395e74a 263 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 31 262 1.8E-61 T 12-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 JDM601_1033 2c5fdd966939d3789864bff7e395e74a 263 SUPERFAMILY SSF64005 28 257 3.53E-70 T 12-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 JDM601_1033 2c5fdd966939d3789864bff7e395e74a 263 Pfam PF01255 Putative undecaprenyl diphosphate synthase 39 262 2.4E-69 T 12-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 JDM601_1033 2c5fdd966939d3789864bff7e395e74a 263 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 208 225 - T 12-10-2018 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 Reactome: R-HSA-446199|Reactome: R-HSA-4755609 JDM601_1033 2c5fdd966939d3789864bff7e395e74a 263 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 31 263 34.396 T 12-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 JDM601_1033 2c5fdd966939d3789864bff7e395e74a 263 Gene3D G3DSA:3.40.1180.10 29 257 7.0E-85 T 12-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 JDM601_1947 46315c13a615a6b5a9f54decaf9afe0d 371 Pfam PF00005 ABC transporter 17 169 1.5E-31 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JDM601_1947 46315c13a615a6b5a9f54decaf9afe0d 371 Gene3D G3DSA:2.40.50.140 274 362 4.7E-9 T 12-10-2018 JDM601_1947 46315c13a615a6b5a9f54decaf9afe0d 371 Gene3D G3DSA:3.40.50.300 15 244 2.4E-64 T 12-10-2018 JDM601_1947 46315c13a615a6b5a9f54decaf9afe0d 371 Pfam PF03459 TOBE domain 299 362 6.6E-11 T 12-10-2018 IPR005116 Transport-associated OB, type 1 JDM601_1947 46315c13a615a6b5a9f54decaf9afe0d 371 SMART SM00382 24 219 2.8E-18 T 12-10-2018 IPR003593 AAA+ ATPase domain JDM601_1947 46315c13a615a6b5a9f54decaf9afe0d 371 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JDM601_1947 46315c13a615a6b5a9f54decaf9afe0d 371 SUPERFAMILY SSF50331 245 362 1.11E-14 T 12-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal JDM601_1947 46315c13a615a6b5a9f54decaf9afe0d 371 Gene3D G3DSA:2.40.50.100 284 359 4.7E-9 T 12-10-2018 JDM601_1947 46315c13a615a6b5a9f54decaf9afe0d 371 SUPERFAMILY SSF52540 16 243 1.05E-61 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_3854 c243144ded39b2828dc79a10aba0c7d8 396 Gene3D G3DSA:1.10.540.10 4 114 2.1E-33 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 JDM601_3854 c243144ded39b2828dc79a10aba0c7d8 396 SUPERFAMILY SSF56645 10 210 2.75E-35 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 JDM601_3854 c243144ded39b2828dc79a10aba0c7d8 396 Pfam PF08028 Acyl-CoA dehydrogenase, C-terminal domain 242 374 1.1E-38 T 12-10-2018 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain JDM601_3854 c243144ded39b2828dc79a10aba0c7d8 396 Gene3D G3DSA:2.40.110.10 115 211 2.7E-32 T 12-10-2018 JDM601_3854 c243144ded39b2828dc79a10aba0c7d8 396 Gene3D G3DSA:1.20.140.10 212 396 4.7E-50 T 12-10-2018 JDM601_3854 c243144ded39b2828dc79a10aba0c7d8 396 PIRSF PIRSF016578 1 396 2.5E-137 T 12-10-2018 JDM601_3854 c243144ded39b2828dc79a10aba0c7d8 396 SUPERFAMILY SSF47203 233 387 1.5E-13 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 JDM601_3520 af4efa2cd092923602ba7bd8ecf5982c 316 Gene3D G3DSA:3.40.50.720 255 280 7.5E-69 T 12-10-2018 JDM601_3520 af4efa2cd092923602ba7bd8ecf5982c 316 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 12 202 1.5E-4 T 12-10-2018 JDM601_3520 af4efa2cd092923602ba7bd8ecf5982c 316 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 96 107 1.7E-23 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3520 af4efa2cd092923602ba7bd8ecf5982c 316 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 143 159 1.7E-23 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3520 af4efa2cd092923602ba7bd8ecf5982c 316 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 13 30 1.7E-23 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3520 af4efa2cd092923602ba7bd8ecf5982c 316 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 169 188 1.7E-23 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3520 af4efa2cd092923602ba7bd8ecf5982c 316 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 190 207 1.7E-23 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3520 af4efa2cd092923602ba7bd8ecf5982c 316 Pfam PF00106 short chain dehydrogenase 13 204 2.7E-42 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3520 af4efa2cd092923602ba7bd8ecf5982c 316 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 96 107 5.7E-7 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3520 af4efa2cd092923602ba7bd8ecf5982c 316 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 149 157 5.7E-7 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3520 af4efa2cd092923602ba7bd8ecf5982c 316 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 169 188 5.7E-7 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3520 af4efa2cd092923602ba7bd8ecf5982c 316 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 156 184 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 JDM601_3520 af4efa2cd092923602ba7bd8ecf5982c 316 Gene3D G3DSA:3.40.50.720 4 254 7.5E-69 T 12-10-2018 JDM601_3520 af4efa2cd092923602ba7bd8ecf5982c 316 SUPERFAMILY SSF51735 7 252 9.55E-64 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_1403 579a7e582905a63dd37b79c051b7709d 523 Gene3D G3DSA:3.90.226.10 1 257 6.4E-97 T 12-10-2018 JDM601_1403 579a7e582905a63dd37b79c051b7709d 523 SUPERFAMILY SSF52096 264 523 1.46E-88 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily JDM601_1403 579a7e582905a63dd37b79c051b7709d 523 SUPERFAMILY SSF52096 13 258 3.08E-71 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily JDM601_1403 579a7e582905a63dd37b79c051b7709d 523 Gene3D G3DSA:3.90.226.10 261 523 3.1E-106 T 12-10-2018 JDM601_1403 579a7e582905a63dd37b79c051b7709d 523 Pfam PF01039 Carboxyl transferase domain 36 512 8.2E-153 T 12-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 JDM601_4322 3e225af6c188c415d6bd0fda0cd324c5 950 Gene3D G3DSA:3.40.50.620 52 173 1.3E-40 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JDM601_4322 3e225af6c188c415d6bd0fda0cd324c5 950 Gene3D G3DSA:3.10.20.590 892 950 3.0E-21 T 12-10-2018 JDM601_4322 3e225af6c188c415d6bd0fda0cd324c5 950 SUPERFAMILY SSF50677 310 495 5.13E-44 T 12-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 JDM601_4322 3e225af6c188c415d6bd0fda0cd324c5 950 Pfam PF09334 tRNA synthetases class I (M) 58 166 2.6E-13 T 12-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 JDM601_4322 3e225af6c188c415d6bd0fda0cd324c5 950 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 289 486 8.4E-57 T 12-10-2018 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 JDM601_4322 3e225af6c188c415d6bd0fda0cd324c5 950 Gene3D G3DSA:3.90.740.10 295 496 3.8E-189 T 12-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 JDM601_4322 3e225af6c188c415d6bd0fda0cd324c5 950 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 13 950 21.285 T 12-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 JDM601_4322 3e225af6c188c415d6bd0fda0cd324c5 950 Gene3D G3DSA:1.10.730.10 731 882 3.8E-189 T 12-10-2018 JDM601_4322 3e225af6c188c415d6bd0fda0cd324c5 950 Gene3D G3DSA:3.10.330.110 677 730 3.8E-189 T 12-10-2018 JDM601_4322 3e225af6c188c415d6bd0fda0cd324c5 950 Pfam PF08264 Anticodon-binding domain of tRNA 796 912 3.8E-11 T 12-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 JDM601_4322 3e225af6c188c415d6bd0fda0cd324c5 950 SUPERFAMILY SSF52374 19 769 2.04E-104 T 12-10-2018 JDM601_4322 3e225af6c188c415d6bd0fda0cd324c5 950 SUPERFAMILY SSF47323 764 950 5.23E-31 T 12-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 JDM601_4322 3e225af6c188c415d6bd0fda0cd324c5 950 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 215 950 1.4E-211 T 12-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 JDM601_4322 3e225af6c188c415d6bd0fda0cd324c5 950 Gene3D G3DSA:3.40.50.620 215 676 3.8E-189 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JDM601_4322 3e225af6c188c415d6bd0fda0cd324c5 950 PRINTS PR00985 Leucyl-tRNA synthetase signature 221 237 3.0E-53 T 12-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 JDM601_4322 3e225af6c188c415d6bd0fda0cd324c5 950 PRINTS PR00985 Leucyl-tRNA synthetase signature 254 267 3.0E-53 T 12-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 JDM601_4322 3e225af6c188c415d6bd0fda0cd324c5 950 PRINTS PR00985 Leucyl-tRNA synthetase signature 283 302 3.0E-53 T 12-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 JDM601_4322 3e225af6c188c415d6bd0fda0cd324c5 950 PRINTS PR00985 Leucyl-tRNA synthetase signature 148 165 3.0E-53 T 12-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 JDM601_4322 3e225af6c188c415d6bd0fda0cd324c5 950 PRINTS PR00985 Leucyl-tRNA synthetase signature 634 656 3.0E-53 T 12-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 JDM601_4322 3e225af6c188c415d6bd0fda0cd324c5 950 PRINTS PR00985 Leucyl-tRNA synthetase signature 667 677 3.0E-53 T 12-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 JDM601_4322 3e225af6c188c415d6bd0fda0cd324c5 950 PRINTS PR00985 Leucyl-tRNA synthetase signature 582 600 3.0E-53 T 12-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 JDM601_4322 3e225af6c188c415d6bd0fda0cd324c5 950 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 64 74 - T 12-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 JDM601_2917 959ac767e99f5db72a41e46a6e499b0c 1044 Gene3D G3DSA:1.10.10.160 116 220 1.2E-28 T 12-10-2018 IPR013986 DExx box DNA helicase domain superfamily JDM601_2917 959ac767e99f5db72a41e46a6e499b0c 1044 SUPERFAMILY SSF52540 14 707 5.78E-74 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_2917 959ac767e99f5db72a41e46a6e499b0c 1044 Pfam PF00580 UvrD/REP helicase N-terminal domain 21 298 2.0E-22 T 12-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 JDM601_2917 959ac767e99f5db72a41e46a6e499b0c 1044 Gene3D G3DSA:3.40.50.300 315 702 3.8E-30 T 12-10-2018 JDM601_2917 959ac767e99f5db72a41e46a6e499b0c 1044 Gene3D G3DSA:1.10.486.10 417 595 3.8E-30 T 12-10-2018 JDM601_2917 959ac767e99f5db72a41e46a6e499b0c 1044 Pfam PF13361 UvrD-like helicase C-terminal domain 308 684 5.8E-16 T 12-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 JDM601_2917 959ac767e99f5db72a41e46a6e499b0c 1044 Gene3D G3DSA:3.40.50.300 21 296 1.2E-28 T 12-10-2018 JDM601_2917 959ac767e99f5db72a41e46a6e499b0c 1044 Pfam PF12705 PD-(D/E)XK nuclease superfamily 798 1036 7.8E-45 T 12-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type JDM601_0647 76a2e3b5af608b10a2e317f0b2f1f55e 252 SUPERFAMILY SSF53335 73 250 3.99E-33 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JDM601_0647 76a2e3b5af608b10a2e317f0b2f1f55e 252 Gene3D G3DSA:3.40.50.150 59 247 1.2E-35 T 12-10-2018 JDM601_0647 76a2e3b5af608b10a2e317f0b2f1f55e 252 Pfam PF08241 Methyltransferase domain 97 204 3.2E-20 T 12-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 JDM601_2315 29d651ff40edf2a97a933c72ac5f618b 329 Gene3D G3DSA:3.40.50.1370 5 305 1.9E-88 T 12-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 JDM601_2315 29d651ff40edf2a97a933c72ac5f618b 329 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 3 310 39.471 T 12-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 JDM601_2315 29d651ff40edf2a97a933c72ac5f618b 329 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 51 58 - T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 JDM601_2315 29d651ff40edf2a97a933c72ac5f618b 329 Gene3D G3DSA:3.40.50.1370 141 295 1.9E-88 T 12-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 JDM601_2315 29d651ff40edf2a97a933c72ac5f618b 329 PRINTS PR00101 Aspartate carbamoyltransferase signature 41 63 1.4E-31 T 12-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 JDM601_2315 29d651ff40edf2a97a933c72ac5f618b 329 PRINTS PR00101 Aspartate carbamoyltransferase signature 289 303 1.4E-31 T 12-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 JDM601_2315 29d651ff40edf2a97a933c72ac5f618b 329 PRINTS PR00101 Aspartate carbamoyltransferase signature 79 88 1.4E-31 T 12-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 JDM601_2315 29d651ff40edf2a97a933c72ac5f618b 329 PRINTS PR00101 Aspartate carbamoyltransferase signature 224 233 1.4E-31 T 12-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 JDM601_2315 29d651ff40edf2a97a933c72ac5f618b 329 PRINTS PR00101 Aspartate carbamoyltransferase signature 140 157 1.4E-31 T 12-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 JDM601_2315 29d651ff40edf2a97a933c72ac5f618b 329 PRINTS PR00101 Aspartate carbamoyltransferase signature 265 270 1.4E-31 T 12-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 JDM601_2315 29d651ff40edf2a97a933c72ac5f618b 329 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 273 296 2.3E-19 T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 JDM601_2315 29d651ff40edf2a97a933c72ac5f618b 329 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 261 270 2.3E-19 T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 JDM601_2315 29d651ff40edf2a97a933c72ac5f618b 329 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 51 70 2.3E-19 T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 JDM601_2315 29d651ff40edf2a97a933c72ac5f618b 329 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 141 152 2.3E-19 T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 JDM601_2315 29d651ff40edf2a97a933c72ac5f618b 329 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 4 153 4.8E-39 T 12-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 JDM601_2315 29d651ff40edf2a97a933c72ac5f618b 329 SUPERFAMILY SSF53671 2 308 4.71E-91 T 12-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 JDM601_2315 29d651ff40edf2a97a933c72ac5f618b 329 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 4 307 9.8E-86 T 12-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 JDM601_2315 29d651ff40edf2a97a933c72ac5f618b 329 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 161 306 2.9E-21 T 12-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 JDM601_3410 b865579689a3a1d69a3cd1229db9062f 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 2.1E-48 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3410 b865579689a3a1d69a3cd1229db9062f 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 2.1E-48 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3410 b865579689a3a1d69a3cd1229db9062f 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 208 228 2.1E-48 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3410 b865579689a3a1d69a3cd1229db9062f 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 2.1E-48 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3410 b865579689a3a1d69a3cd1229db9062f 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 2.1E-48 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3410 b865579689a3a1d69a3cd1229db9062f 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 2.1E-48 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3410 b865579689a3a1d69a3cd1229db9062f 246 SUPERFAMILY SSF51735 6 246 1.15E-81 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_3410 b865579689a3a1d69a3cd1229db9062f 246 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 245 1.1E-66 T 12-10-2018 JDM601_3410 b865579689a3a1d69a3cd1229db9062f 246 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 141 169 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 JDM601_3410 b865579689a3a1d69a3cd1229db9062f 246 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 190 3.3E-7 T 12-10-2018 JDM601_3410 b865579689a3a1d69a3cd1229db9062f 246 Gene3D G3DSA:3.40.50.720 2 246 3.2E-83 T 12-10-2018 JDM601_3410 b865579689a3a1d69a3cd1229db9062f 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 2.0E-14 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3410 b865579689a3a1d69a3cd1229db9062f 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 2.0E-14 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3410 b865579689a3a1d69a3cd1229db9062f 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 2.0E-14 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2393 9962b4bd27a632930725961a4176bed3 374 SUPERFAMILY SSF53756 2 363 2.94E-75 T 12-10-2018 JDM601_2393 9962b4bd27a632930725961a4176bed3 374 Pfam PF13439 Glycosyltransferase Family 4 14 172 4.4E-25 T 12-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 JDM601_2393 9962b4bd27a632930725961a4176bed3 374 Gene3D G3DSA:3.40.50.2000 11 360 1.1E-131 T 12-10-2018 JDM601_2393 9962b4bd27a632930725961a4176bed3 374 Pfam PF13692 Glycosyl transferases group 1 189 329 3.2E-32 T 12-10-2018 JDM601_2393 9962b4bd27a632930725961a4176bed3 374 Gene3D G3DSA:3.40.50.2000 171 347 1.1E-131 T 12-10-2018 JDM601_4118 fee8d6a709fb5c1d71e0c18f70054419 637 Gene3D G3DSA:3.30.300.30 492 633 1.2E-50 T 12-10-2018 JDM601_4118 fee8d6a709fb5c1d71e0c18f70054419 637 SUPERFAMILY SSF56801 26 621 3.27E-92 T 12-10-2018 JDM601_4118 fee8d6a709fb5c1d71e0c18f70054419 637 Pfam PF00501 AMP-binding enzyme 33 497 1.9E-66 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 JDM601_4118 fee8d6a709fb5c1d71e0c18f70054419 637 Gene3D G3DSA:3.40.50.12780 10 491 6.2E-191 T 12-10-2018 JDM601_2555 1ae22840d00b6ef8972e113b83fcec8d 280 SUPERFAMILY SSF140459 6 126 3.4E-35 T 12-10-2018 JDM601_2555 1ae22840d00b6ef8972e113b83fcec8d 280 Gene3D G3DSA:1.20.1260.20 1 127 1.4E-37 T 12-10-2018 IPR038332 PPE superfamily JDM601_2555 1ae22840d00b6ef8972e113b83fcec8d 280 Pfam PF00823 PPE family 3 113 3.3E-33 T 12-10-2018 IPR000030 PPE family JDM601_4071 52df0ca075825348660cf3c0a2feef30 202 SUPERFAMILY SSF55729 2 183 4.45E-36 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase JDM601_4071 52df0ca075825348660cf3c0a2feef30 202 Gene3D G3DSA:3.40.630.30 1 194 2.4E-44 T 12-10-2018 JDM601_4071 52df0ca075825348660cf3c0a2feef30 202 SMART SM01006 30 77 4.9E-10 T 12-10-2018 IPR019432 Siderophore biosynthesis protein, conserved domain JDM601_4071 52df0ca075825348660cf3c0a2feef30 202 Pfam PF13523 Acetyltransferase (GNAT) domain 36 175 1.1E-30 T 12-10-2018 JDM601_2789 dbb188516a2f154b1c85699102af68c0 79 Gene3D G3DSA:3.40.30.10 1 79 2.1E-29 T 12-10-2018 JDM601_2789 dbb188516a2f154b1c85699102af68c0 79 TIGRFAM TIGR02194 GlrX_NrdH: glutaredoxin-like protein NrdH 3 73 1.4E-34 T 12-10-2018 IPR011909 Glutaredoxin-like protein NrdH GO:0045454 JDM601_2789 dbb188516a2f154b1c85699102af68c0 79 SUPERFAMILY SSF52833 1 72 9.89E-20 T 12-10-2018 IPR036249 Thioredoxin-like superfamily JDM601_2789 dbb188516a2f154b1c85699102af68c0 79 Pfam PF00462 Glutaredoxin 3 61 1.1E-15 T 12-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 JDM601_3133 d1d0c198973f6fb45f7757a9af53a2e6 536 Gene3D G3DSA:3.40.120.10 298 425 5.8E-29 T 12-10-2018 JDM601_3133 d1d0c198973f6fb45f7757a9af53a2e6 536 Gene3D G3DSA:3.40.120.10 26 175 1.1E-43 T 12-10-2018 JDM601_3133 d1d0c198973f6fb45f7757a9af53a2e6 536 SUPERFAMILY SSF53738 190 288 1.06E-19 T 12-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JDM601_3133 d1d0c198973f6fb45f7757a9af53a2e6 536 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 204 288 1.7E-20 T 12-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JDM601_3133 d1d0c198973f6fb45f7757a9af53a2e6 536 SUPERFAMILY SSF53738 25 179 2.75E-43 T 12-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JDM601_3133 d1d0c198973f6fb45f7757a9af53a2e6 536 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 36 170 7.6E-41 T 12-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JDM601_3133 d1d0c198973f6fb45f7757a9af53a2e6 536 Gene3D G3DSA:3.40.120.10 192 294 6.1E-20 T 12-10-2018 JDM601_3133 d1d0c198973f6fb45f7757a9af53a2e6 536 SUPERFAMILY SSF53738 281 425 1.88E-27 T 12-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JDM601_3133 d1d0c198973f6fb45f7757a9af53a2e6 536 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 301 419 4.7E-17 T 12-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JDM601_3133 d1d0c198973f6fb45f7757a9af53a2e6 536 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 485 510 8.2E-7 T 12-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JDM601_3133 d1d0c198973f6fb45f7757a9af53a2e6 536 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 206 225 3.2E-10 T 12-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JDM601_3133 d1d0c198973f6fb45f7757a9af53a2e6 536 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 130 144 3.2E-10 T 12-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JDM601_3133 d1d0c198973f6fb45f7757a9af53a2e6 536 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 273 288 3.2E-10 T 12-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JDM601_3133 d1d0c198973f6fb45f7757a9af53a2e6 536 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 131 140 - T 12-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JDM601_3133 d1d0c198973f6fb45f7757a9af53a2e6 536 SUPERFAMILY SSF55957 428 512 7.72E-10 T 12-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JDM601_3133 d1d0c198973f6fb45f7757a9af53a2e6 536 Gene3D G3DSA:3.30.310.50 426 525 3.0E-5 T 12-10-2018 JDM601_3288 8a44d67642178697e6ff01e4147b542f 190 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 4 189 2.0E-66 T 12-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 JDM601_3288 8a44d67642178697e6ff01e4147b542f 190 TIGRFAM TIGR01221 rmlC: dTDP-4-dehydrorhamnose 3,5-epimerase 5 178 1.1E-51 T 12-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 JDM601_3288 8a44d67642178697e6ff01e4147b542f 190 Pfam PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase 6 177 2.9E-64 T 12-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 JDM601_3288 8a44d67642178697e6ff01e4147b542f 190 SUPERFAMILY SSF51182 3 187 2.25E-70 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily JDM601_3288 8a44d67642178697e6ff01e4147b542f 190 Gene3D G3DSA:2.60.120.10 1 190 1.6E-71 T 12-10-2018 IPR014710 RmlC-like jelly roll fold JDM601_3412 73e160f485b66c329e5a3773a7bda978 273 Gene3D G3DSA:3.40.50.720 1 273 5.6E-85 T 12-10-2018 JDM601_3412 73e160f485b66c329e5a3773a7bda978 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 144 160 1.6E-34 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3412 73e160f485b66c329e5a3773a7bda978 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 1.6E-34 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3412 73e160f485b66c329e5a3773a7bda978 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 191 208 1.6E-34 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3412 73e160f485b66c329e5a3773a7bda978 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 96 107 1.6E-34 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3412 73e160f485b66c329e5a3773a7bda978 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 170 189 1.6E-34 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3412 73e160f485b66c329e5a3773a7bda978 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 234 254 1.6E-34 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3412 73e160f485b66c329e5a3773a7bda978 273 TIGRFAM TIGR03971 SDR_subfam_1: SDR family mycofactocin-dependent oxidoreductase 5 271 1.8E-99 T 12-10-2018 IPR023985 Mycofactocin-dependent oxidoreductase JDM601_3412 73e160f485b66c329e5a3773a7bda978 273 SUPERFAMILY SSF51735 2 272 3.08E-66 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_3412 73e160f485b66c329e5a3773a7bda978 273 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 271 1.8E-44 T 12-10-2018 JDM601_3412 73e160f485b66c329e5a3773a7bda978 273 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 157 185 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 JDM601_3412 73e160f485b66c329e5a3773a7bda978 273 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 96 107 2.3E-8 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3412 73e160f485b66c329e5a3773a7bda978 273 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 150 158 2.3E-8 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3412 73e160f485b66c329e5a3773a7bda978 273 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 170 189 2.3E-8 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2762 62f88d36427deddca2bc86280c9496d6 323 Pfam PF08241 Methyltransferase domain 78 175 1.1E-24 T 12-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 JDM601_2762 62f88d36427deddca2bc86280c9496d6 323 SUPERFAMILY SSF53335 38 321 6.33E-37 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JDM601_1544 92e584d021bf5447d3c49a801b0a3591 430 Pfam PF13434 L-lysine 6-monooxygenase (NADPH-requiring) 87 282 1.1E-9 T 12-10-2018 IPR025700 L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase JDM601_1544 92e584d021bf5447d3c49a801b0a3591 430 SUPERFAMILY SSF51905 4 237 5.61E-8 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_1544 92e584d021bf5447d3c49a801b0a3591 430 Gene3D G3DSA:3.50.50.60 2 411 1.8E-40 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_1544 92e584d021bf5447d3c49a801b0a3591 430 SUPERFAMILY SSF51735 194 335 5.9E-5 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_4287 de6ee46acf644974aa7cccf3e9381e5c 238 Pfam PF02405 Permease MlaE 20 231 1.0E-55 T 12-10-2018 IPR030802 ABC transporter permease MalE GO:0043190 JDM601_3243 a6f613ccea41c84cdfd1c4fe4612030d 386 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 39 49 - T 12-10-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 JDM601_3243 a6f613ccea41c84cdfd1c4fe4612030d 386 Gene3D G3DSA:2.40.37.10 16 378 8.0E-134 T 12-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 JDM601_3243 a6f613ccea41c84cdfd1c4fe4612030d 386 PRINTS PR00992 Alanine racemase signature 70 88 2.6E-69 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 JDM601_3243 a6f613ccea41c84cdfd1c4fe4612030d 386 PRINTS PR00992 Alanine racemase signature 304 321 2.6E-69 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 JDM601_3243 a6f613ccea41c84cdfd1c4fe4612030d 386 PRINTS PR00992 Alanine racemase signature 211 238 2.6E-69 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 JDM601_3243 a6f613ccea41c84cdfd1c4fe4612030d 386 PRINTS PR00992 Alanine racemase signature 361 374 2.6E-69 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 JDM601_3243 a6f613ccea41c84cdfd1c4fe4612030d 386 PRINTS PR00992 Alanine racemase signature 34 50 2.6E-69 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 JDM601_3243 a6f613ccea41c84cdfd1c4fe4612030d 386 PRINTS PR00992 Alanine racemase signature 131 143 2.6E-69 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 JDM601_3243 a6f613ccea41c84cdfd1c4fe4612030d 386 PRINTS PR00992 Alanine racemase signature 266 281 2.6E-69 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 JDM601_3243 a6f613ccea41c84cdfd1c4fe4612030d 386 PRINTS PR00992 Alanine racemase signature 168 179 2.6E-69 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 JDM601_3243 a6f613ccea41c84cdfd1c4fe4612030d 386 PRINTS PR00992 Alanine racemase signature 283 298 2.6E-69 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 JDM601_3243 a6f613ccea41c84cdfd1c4fe4612030d 386 SUPERFAMILY SSF50621 244 381 2.72E-46 T 12-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 JDM601_3243 a6f613ccea41c84cdfd1c4fe4612030d 386 SUPERFAMILY SSF51419 16 251 4.97E-64 T 12-10-2018 IPR029066 PLP-binding barrel JDM601_3243 a6f613ccea41c84cdfd1c4fe4612030d 386 Hamap MF_01201 Alanine racemase. 9 379 32.717 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 JDM601_3243 a6f613ccea41c84cdfd1c4fe4612030d 386 Gene3D G3DSA:3.20.20.10 18 233 8.0E-134 T 12-10-2018 IPR029066 PLP-binding barrel JDM601_3243 a6f613ccea41c84cdfd1c4fe4612030d 386 Pfam PF01168 Alanine racemase, N-terminal domain 16 238 1.4E-67 T 12-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 JDM601_3243 a6f613ccea41c84cdfd1c4fe4612030d 386 TIGRFAM TIGR00492 alr: alanine racemase 15 378 1.3E-96 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 JDM601_3243 a6f613ccea41c84cdfd1c4fe4612030d 386 SMART SM01005 250 379 1.5E-64 T 12-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 JDM601_3243 a6f613ccea41c84cdfd1c4fe4612030d 386 Pfam PF00842 Alanine racemase, C-terminal domain 250 378 2.4E-41 T 12-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 JDM601_2569 4e3b66c0fcf24aff623e0db726d54514 585 SUPERFAMILY SSF55826 221 392 4.19E-9 T 12-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 JDM601_2569 4e3b66c0fcf24aff623e0db726d54514 585 SUPERFAMILY SSF52954 476 570 3.27E-24 T 12-10-2018 JDM601_2569 4e3b66c0fcf24aff623e0db726d54514 585 Gene3D G3DSA:3.90.960.10 242 401 7.5E-206 T 12-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 JDM601_2569 4e3b66c0fcf24aff623e0db726d54514 585 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 96 470 9.2E-37 T 12-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 JDM601_2569 4e3b66c0fcf24aff623e0db726d54514 585 Pfam PF04073 Aminoacyl-tRNA editing domain 262 391 4.9E-20 T 12-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 JDM601_2569 4e3b66c0fcf24aff623e0db726d54514 585 Hamap MF_01569 Proline--tRNA ligase [proS]. 3 582 35.929 T 12-10-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 JDM601_2569 4e3b66c0fcf24aff623e0db726d54514 585 Pfam PF03129 Anticodon binding domain 491 569 3.0E-14 T 12-10-2018 IPR004154 Anticodon-binding JDM601_2569 4e3b66c0fcf24aff623e0db726d54514 585 SUPERFAMILY SSF55681 12 489 4.35E-84 T 12-10-2018 JDM601_2569 4e3b66c0fcf24aff623e0db726d54514 585 Gene3D G3DSA:3.30.930.10 13 477 7.5E-206 T 12-10-2018 JDM601_2569 4e3b66c0fcf24aff623e0db726d54514 585 PRINTS PR01046 Prolyl-tRNA synthetase signature 70 88 8.6E-15 T 12-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 JDM601_2569 4e3b66c0fcf24aff623e0db726d54514 585 PRINTS PR01046 Prolyl-tRNA synthetase signature 106 117 8.6E-15 T 12-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 JDM601_2569 4e3b66c0fcf24aff623e0db726d54514 585 PRINTS PR01046 Prolyl-tRNA synthetase signature 146 157 8.6E-15 T 12-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 JDM601_2569 4e3b66c0fcf24aff623e0db726d54514 585 PRINTS PR01046 Prolyl-tRNA synthetase signature 136 144 8.6E-15 T 12-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 JDM601_2569 4e3b66c0fcf24aff623e0db726d54514 585 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 4 569 9.0E-163 T 12-10-2018 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 JDM601_2569 4e3b66c0fcf24aff623e0db726d54514 585 Gene3D G3DSA:3.40.50.800 5 564 7.5E-206 T 12-10-2018 IPR036621 Anticodon-binding domain superfamily JDM601_0572 ad7157c586506ad98c63507617f29dd3 291 Pfam PF00106 short chain dehydrogenase 15 142 4.5E-16 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0572 ad7157c586506ad98c63507617f29dd3 291 Gene3D G3DSA:3.40.50.720 1 291 2.1E-78 T 12-10-2018 JDM601_0572 ad7157c586506ad98c63507617f29dd3 291 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 123 139 5.2E-13 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0572 ad7157c586506ad98c63507617f29dd3 291 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 15 32 5.2E-13 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0572 ad7157c586506ad98c63507617f29dd3 291 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 186 203 5.2E-13 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0572 ad7157c586506ad98c63507617f29dd3 291 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 163 182 5.2E-13 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0572 ad7157c586506ad98c63507617f29dd3 291 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 5.2E-13 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0572 ad7157c586506ad98c63507617f29dd3 291 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 129 137 7.5E-5 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0572 ad7157c586506ad98c63507617f29dd3 291 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 163 182 7.5E-5 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0572 ad7157c586506ad98c63507617f29dd3 291 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 7.5E-5 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0572 ad7157c586506ad98c63507617f29dd3 291 SUPERFAMILY SSF51735 12 237 2.1E-49 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_2243 d93507c59e3fa8975c17e715dd659622 281 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 113 133 - T 12-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 JDM601_2243 d93507c59e3fa8975c17e715dd659622 281 SUPERFAMILY SSF52096 7 274 7.1E-70 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily JDM601_2243 d93507c59e3fa8975c17e715dd659622 281 Pfam PF00378 Enoyl-CoA hydratase/isomerase 19 274 1.0E-44 T 12-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 JDM601_2243 d93507c59e3fa8975c17e715dd659622 281 Gene3D G3DSA:1.10.12.10 216 276 5.7E-37 T 12-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal JDM601_2243 d93507c59e3fa8975c17e715dd659622 281 Gene3D G3DSA:3.90.226.10 8 215 2.6E-74 T 12-10-2018 JDM601_0913 71b00b9617bb6fa017bc1065f5d11e8e 217 SUPERFAMILY SSF46894 147 215 7.14E-22 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 JDM601_0913 71b00b9617bb6fa017bc1065f5d11e8e 217 ProSitePatterns PS00622 LuxR-type HTH domain signature. 169 196 - T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JDM601_0913 71b00b9617bb6fa017bc1065f5d11e8e 217 Gene3D G3DSA:3.40.50.12740 5 215 1.6E-66 T 12-10-2018 JDM601_0913 71b00b9617bb6fa017bc1065f5d11e8e 217 Pfam PF00072 Response regulator receiver domain 7 118 5.1E-30 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JDM601_0913 71b00b9617bb6fa017bc1065f5d11e8e 217 SUPERFAMILY SSF52172 4 126 1.42E-34 T 12-10-2018 IPR011006 CheY-like superfamily JDM601_0913 71b00b9617bb6fa017bc1065f5d11e8e 217 Pfam PF00196 Bacterial regulatory proteins, luxR family 154 209 1.7E-19 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JDM601_0913 71b00b9617bb6fa017bc1065f5d11e8e 217 SMART SM00448 5 118 8.6E-32 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JDM601_0913 71b00b9617bb6fa017bc1065f5d11e8e 217 SMART SM00421 152 209 1.8E-23 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JDM601_0913 71b00b9617bb6fa017bc1065f5d11e8e 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 155 169 3.4E-14 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JDM601_0913 71b00b9617bb6fa017bc1065f5d11e8e 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 169 185 3.4E-14 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JDM601_0913 71b00b9617bb6fa017bc1065f5d11e8e 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 185 197 3.4E-14 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JDM601_2198 d623c0960fb2d25ddd84b0ff5ac0ffcc 452 PRINTS PR00385 P450 superfamily signature 384 395 1.0E-6 T 12-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_2198 d623c0960fb2d25ddd84b0ff5ac0ffcc 452 PRINTS PR00385 P450 superfamily signature 375 384 1.0E-6 T 12-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_2198 d623c0960fb2d25ddd84b0ff5ac0ffcc 452 PRINTS PR00385 P450 superfamily signature 274 291 1.0E-6 T 12-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_2198 d623c0960fb2d25ddd84b0ff5ac0ffcc 452 PRINTS PR00385 P450 superfamily signature 309 320 1.0E-6 T 12-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_2198 d623c0960fb2d25ddd84b0ff5ac0ffcc 452 Gene3D G3DSA:1.10.630.10 22 448 3.5E-119 T 12-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_2198 d623c0960fb2d25ddd84b0ff5ac0ffcc 452 Pfam PF00067 Cytochrome P450 75 402 3.7E-30 T 12-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_2198 d623c0960fb2d25ddd84b0ff5ac0ffcc 452 PRINTS PR00359 B-class P450 signature 326 353 2.6E-45 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_2198 d623c0960fb2d25ddd84b0ff5ac0ffcc 452 PRINTS PR00359 B-class P450 signature 309 320 2.6E-45 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_2198 d623c0960fb2d25ddd84b0ff5ac0ffcc 452 PRINTS PR00359 B-class P450 signature 229 251 2.6E-45 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_2198 d623c0960fb2d25ddd84b0ff5ac0ffcc 452 PRINTS PR00359 B-class P450 signature 384 395 2.6E-45 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_2198 d623c0960fb2d25ddd84b0ff5ac0ffcc 452 PRINTS PR00359 B-class P450 signature 375 384 2.6E-45 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_2198 d623c0960fb2d25ddd84b0ff5ac0ffcc 452 PRINTS PR00359 B-class P450 signature 354 369 2.6E-45 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_2198 d623c0960fb2d25ddd84b0ff5ac0ffcc 452 PRINTS PR00359 B-class P450 signature 166 182 2.6E-45 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_2198 d623c0960fb2d25ddd84b0ff5ac0ffcc 452 PRINTS PR00359 B-class P450 signature 183 198 2.6E-45 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_2198 d623c0960fb2d25ddd84b0ff5ac0ffcc 452 PRINTS PR00359 B-class P450 signature 120 131 2.6E-45 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_2198 d623c0960fb2d25ddd84b0ff5ac0ffcc 452 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 377 386 - T 12-10-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 JDM601_2198 d623c0960fb2d25ddd84b0ff5ac0ffcc 452 SUPERFAMILY SSF48264 48 434 2.36E-89 T 12-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_0499 9d057880084ece822ea9ef582831d3e8 343 PIRSF PIRSF016753 31 343 2.1E-115 T 12-10-2018 IPR016676 Phospholipid/glycerol acyltransferase, predicted JDM601_0499 9d057880084ece822ea9ef582831d3e8 343 SUPERFAMILY SSF69593 94 336 1.15E-38 T 12-10-2018 JDM601_0499 9d057880084ece822ea9ef582831d3e8 343 SMART SM00563 129 248 1.0E-22 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 JDM601_0499 9d057880084ece822ea9ef582831d3e8 343 Pfam PF01553 Acyltransferase 114 245 3.5E-20 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 JDM601_1878 06f50c7b3f48edbf3002ef2f39055832 547 Gene3D G3DSA:3.40.50.10380 6 259 3.2E-108 T 12-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 JDM601_1878 06f50c7b3f48edbf3002ef2f39055832 547 SMART SM01274 72 252 6.5E-98 T 12-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 JDM601_1878 06f50c7b3f48edbf3002ef2f39055832 547 SMART SM00919 262 518 3.4E-107 T 12-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 JDM601_1878 06f50c7b3f48edbf3002ef2f39055832 547 PIRSF PIRSF000106 1 547 5.6E-205 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 JDM601_1878 06f50c7b3f48edbf3002ef2f39055832 547 Pfam PF00390 Malic enzyme, N-terminal domain 72 252 1.4E-73 T 12-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 JDM601_1878 06f50c7b3f48edbf3002ef2f39055832 547 SUPERFAMILY SSF51735 262 545 2.68E-85 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_1878 06f50c7b3f48edbf3002ef2f39055832 547 Gene3D G3DSA:3.40.50.720 260 547 3.3E-97 T 12-10-2018 JDM601_1878 06f50c7b3f48edbf3002ef2f39055832 547 PRINTS PR00072 Malic enzyme signature 174 196 1.8E-72 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 JDM601_1878 06f50c7b3f48edbf3002ef2f39055832 547 PRINTS PR00072 Malic enzyme signature 78 102 1.8E-72 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 JDM601_1878 06f50c7b3f48edbf3002ef2f39055832 547 PRINTS PR00072 Malic enzyme signature 138 167 1.8E-72 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 JDM601_1878 06f50c7b3f48edbf3002ef2f39055832 547 PRINTS PR00072 Malic enzyme signature 395 411 1.8E-72 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 JDM601_1878 06f50c7b3f48edbf3002ef2f39055832 547 PRINTS PR00072 Malic enzyme signature 258 274 1.8E-72 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 JDM601_1878 06f50c7b3f48edbf3002ef2f39055832 547 PRINTS PR00072 Malic enzyme signature 289 305 1.8E-72 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 JDM601_1878 06f50c7b3f48edbf3002ef2f39055832 547 PRINTS PR00072 Malic enzyme signature 233 251 1.8E-72 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 JDM601_1878 06f50c7b3f48edbf3002ef2f39055832 547 SUPERFAMILY SSF53223 5 261 9.35E-100 T 12-10-2018 JDM601_1878 06f50c7b3f48edbf3002ef2f39055832 547 Pfam PF03949 Malic enzyme, NAD binding domain 262 517 7.2E-91 T 12-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 JDM601_0028 b03966ff3dca9d6ea49fc5b69ea06309 203 Gene3D G3DSA:1.10.357.10 4 201 4.5E-21 T 12-10-2018 JDM601_0028 b03966ff3dca9d6ea49fc5b69ea06309 203 SUPERFAMILY SSF48498 84 193 1.16E-5 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily JDM601_0028 b03966ff3dca9d6ea49fc5b69ea06309 203 SUPERFAMILY SSF46689 10 75 4.19E-15 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JDM601_0028 b03966ff3dca9d6ea49fc5b69ea06309 203 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 15 28 1.2E-7 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_0028 b03966ff3dca9d6ea49fc5b69ea06309 203 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 36 59 1.2E-7 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_0028 b03966ff3dca9d6ea49fc5b69ea06309 203 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 58 1.5E-13 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_1602 976a9fbec4820bc7bd7cdf2d331ee2a4 247 Pfam PF07298 NnrU protein 54 200 9.5E-9 T 12-10-2018 IPR009915 NnrU domain JDM601_1602 976a9fbec4820bc7bd7cdf2d331ee2a4 247 Gene3D G3DSA:1.20.120.1630 50 239 4.1E-9 T 12-10-2018 JDM601_2632 ec760596f98a762fe08a7da974d25fdb 139 Pfam PF13577 SnoaL-like domain 6 129 1.3E-29 T 12-10-2018 IPR037401 SnoaL-like domain JDM601_2632 ec760596f98a762fe08a7da974d25fdb 139 SUPERFAMILY SSF54427 5 134 2.29E-34 T 12-10-2018 IPR032710 NTF2-like domain superfamily JDM601_2632 ec760596f98a762fe08a7da974d25fdb 139 Gene3D G3DSA:3.10.450.50 3 136 2.8E-32 T 12-10-2018 JDM601_1228 2b4141f488be23f453fc769d8cf68693 272 Pfam PF03167 Uracil DNA glycosylase superfamily 91 261 2.4E-29 T 12-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 JDM601_1228 2b4141f488be23f453fc769d8cf68693 272 SUPERFAMILY SSF52141 58 265 4.25E-42 T 12-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 JDM601_1228 2b4141f488be23f453fc769d8cf68693 272 SMART SM00986 91 261 8.5E-33 T 12-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 JDM601_1228 2b4141f488be23f453fc769d8cf68693 272 SMART SM00987 91 261 8.5E-33 T 12-10-2018 JDM601_1228 2b4141f488be23f453fc769d8cf68693 272 Gene3D G3DSA:3.40.470.10 48 270 2.4E-63 T 12-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 JDM601_2760 926b9506b3e84fc5ca76a9753cb14f6c 233 Gene3D G3DSA:3.30.565.40 28 146 1.7E-48 T 12-10-2018 JDM601_2760 926b9506b3e84fc5ca76a9753cb14f6c 233 Gene3D G3DSA:3.90.640.20 147 232 7.8E-26 T 12-10-2018 IPR037126 PdaC/RsiV-like superfamily JDM601_2760 926b9506b3e84fc5ca76a9753cb14f6c 233 Pfam PF11738 Protein of unknown function (DUF3298) 150 225 3.9E-14 T 12-10-2018 IPR021729 Domain of unknown function DUF3298 JDM601_2213 b66c8319046a7a43b0aac2029975d545 1669 Gene3D G3DSA:3.10.129.110 916 1017 3.9E-14 T 12-10-2018 JDM601_2213 b66c8319046a7a43b0aac2029975d545 1669 SUPERFAMILY SSF53901 2 294 6.77E-73 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 JDM601_2213 b66c8319046a7a43b0aac2029975d545 1669 Gene3D G3DSA:3.40.50.720 1020 1524 1.2E-97 T 12-10-2018 JDM601_2213 b66c8319046a7a43b0aac2029975d545 1669 SMART SM01294 1554 1620 1.0E-7 T 12-10-2018 JDM601_2213 b66c8319046a7a43b0aac2029975d545 1669 Gene3D G3DSA:3.10.129.110 784 915 1.8E-24 T 12-10-2018 JDM601_2213 b66c8319046a7a43b0aac2029975d545 1669 SUPERFAMILY SSF52151 437 719 2.33E-56 T 12-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase JDM601_2213 b66c8319046a7a43b0aac2029975d545 1669 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 294 385 1.1E-9 T 12-10-2018 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 JDM601_2213 b66c8319046a7a43b0aac2029975d545 1669 Gene3D G3DSA:1.10.1200.10 1545 1629 2.1E-19 T 12-10-2018 IPR036736 ACP-like superfamily JDM601_2213 b66c8319046a7a43b0aac2029975d545 1669 SMART SM00826 786 940 7.1E-14 T 12-10-2018 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 JDM601_2213 b66c8319046a7a43b0aac2029975d545 1669 SUPERFAMILY SSF51735 1270 1494 4.55E-39 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_2213 b66c8319046a7a43b0aac2029975d545 1669 SUPERFAMILY SSF55048 562 623 2.22E-7 T 12-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding JDM601_2213 b66c8319046a7a43b0aac2029975d545 1669 Pfam PF00698 Acyl transferase domain 438 751 1.4E-82 T 12-10-2018 IPR014043 Acyl transferase JDM601_2213 b66c8319046a7a43b0aac2029975d545 1669 Gene3D G3DSA:3.40.366.20 355 748 4.1E-117 T 12-10-2018 JDM601_2213 b66c8319046a7a43b0aac2029975d545 1669 Gene3D G3DSA:3.40.47.10 1 354 8.3E-144 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 JDM601_2213 b66c8319046a7a43b0aac2029975d545 1669 Pfam PF14765 Polyketide synthase dehydratase 786 915 7.1E-18 T 12-10-2018 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 JDM601_2213 b66c8319046a7a43b0aac2029975d545 1669 Pfam PF14765 Polyketide synthase dehydratase 917 1017 1.9E-16 T 12-10-2018 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 JDM601_2213 b66c8319046a7a43b0aac2029975d545 1669 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 1272 1450 2.3E-38 T 12-10-2018 JDM601_2213 b66c8319046a7a43b0aac2029975d545 1669 SMART SM00823 Phosphopantetheine attachment site 1553 1624 6.8E-14 T 12-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 JDM601_2213 b66c8319046a7a43b0aac2029975d545 1669 SUPERFAMILY SSF47336 1547 1629 6.81E-15 T 12-10-2018 IPR036736 ACP-like superfamily JDM601_2213 b66c8319046a7a43b0aac2029975d545 1669 Gene3D G3DSA:3.30.70.250 558 624 4.1E-117 T 12-10-2018 JDM601_2213 b66c8319046a7a43b0aac2029975d545 1669 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 167 283 3.7E-42 T 12-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal JDM601_2213 b66c8319046a7a43b0aac2029975d545 1669 SUPERFAMILY SSF51735 1024 1253 2.05E-19 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_2213 b66c8319046a7a43b0aac2029975d545 1669 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 440 733 1.6E-86 T 12-10-2018 IPR020801 Polyketide synthase, acyl transferase domain JDM601_2213 b66c8319046a7a43b0aac2029975d545 1669 Pfam PF08659 KR domain 1272 1449 2.5E-54 T 12-10-2018 IPR013968 Polyketide synthase, ketoreductase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 JDM601_2213 b66c8319046a7a43b0aac2029975d545 1669 Pfam PF00550 Phosphopantetheine attachment site 1555 1620 1.3E-12 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain JDM601_2213 b66c8319046a7a43b0aac2029975d545 1669 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 1 159 6.2E-55 T 12-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal JDM601_2213 b66c8319046a7a43b0aac2029975d545 1669 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 72 88 - T 12-10-2018 IPR018201 Beta-ketoacyl synthase, active site JDM601_2213 b66c8319046a7a43b0aac2029975d545 1669 SMART SM00825 Beta-ketoacyl synthase 1 336 4.0E-129 T 12-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain JDM601_1774 7d923bd9ee8ed9393c65613c58e37eef 288 SUPERFAMILY SSF159659 9 262 2.35E-88 T 12-10-2018 JDM601_1774 7d923bd9ee8ed9393c65613c58e37eef 288 Gene3D G3DSA:1.10.287.100 221 259 3.7E-90 T 12-10-2018 JDM601_1774 7d923bd9ee8ed9393c65613c58e37eef 288 PIRSF PIRSF028754 1 288 1.0E-121 T 12-10-2018 IPR008492 Protein of unknown function DUF774 JDM601_1774 7d923bd9ee8ed9393c65613c58e37eef 288 Gene3D G3DSA:3.40.50.10900 17 220 3.7E-90 T 12-10-2018 IPR038389 Proteasome assembly chaperone 2 superfamily JDM601_1774 7d923bd9ee8ed9393c65613c58e37eef 288 Pfam PF09754 PAC2 family 22 239 3.1E-50 T 12-10-2018 IPR019151 Proteasome assembly chaperone 2 JDM601_3376 d47be7d69d400b2769f3adb8ff39b116 739 Gene3D G3DSA:1.20.140.10 221 359 3.5E-22 T 12-10-2018 JDM601_3376 d47be7d69d400b2769f3adb8ff39b116 739 SUPERFAMILY SSF47203 223 354 1.56E-23 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 JDM601_3376 d47be7d69d400b2769f3adb8ff39b116 739 SUPERFAMILY SSF56645 407 603 3.53E-52 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 JDM601_3376 d47be7d69d400b2769f3adb8ff39b116 739 Gene3D G3DSA:2.40.110.10 486 596 1.0E-33 T 12-10-2018 JDM601_3376 d47be7d69d400b2769f3adb8ff39b116 739 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 5 104 1.9E-9 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 JDM601_3376 d47be7d69d400b2769f3adb8ff39b116 739 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 374 482 2.2E-6 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 JDM601_3376 d47be7d69d400b2769f3adb8ff39b116 739 Gene3D G3DSA:2.40.110.10 123 219 6.2E-9 T 12-10-2018 JDM601_3376 d47be7d69d400b2769f3adb8ff39b116 739 Gene3D G3DSA:1.10.540.10 370 483 7.6E-8 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 JDM601_3376 d47be7d69d400b2769f3adb8ff39b116 739 Gene3D G3DSA:1.10.540.10 1 116 3.7E-16 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 JDM601_3376 d47be7d69d400b2769f3adb8ff39b116 739 Gene3D G3DSA:1.20.140.10 597 739 1.0E-16 T 12-10-2018 JDM601_3376 d47be7d69d400b2769f3adb8ff39b116 739 SUPERFAMILY SSF56645 3 207 3.4E-20 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 JDM601_3376 d47be7d69d400b2769f3adb8ff39b116 739 SUPERFAMILY SSF47203 594 736 4.04E-11 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 JDM601_3376 d47be7d69d400b2769f3adb8ff39b116 739 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 486 579 1.6E-17 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 JDM601_3376 d47be7d69d400b2769f3adb8ff39b116 739 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 224 338 1.7E-15 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 JDM601_3376 d47be7d69d400b2769f3adb8ff39b116 739 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 593 733 2.3E-8 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 JDM601_4239 f44e9f70dcfef83270c56e7e8f080a3c 273 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 22 249 6.3E-61 T 12-10-2018 JDM601_4239 f44e9f70dcfef83270c56e7e8f080a3c 273 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 144 172 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 JDM601_4239 f44e9f70dcfef83270c56e7e8f080a3c 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 3.7E-38 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_4239 f44e9f70dcfef83270c56e7e8f080a3c 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 3.7E-38 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_4239 f44e9f70dcfef83270c56e7e8f080a3c 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 3.7E-38 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_4239 f44e9f70dcfef83270c56e7e8f080a3c 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 131 147 3.7E-38 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_4239 f44e9f70dcfef83270c56e7e8f080a3c 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 212 232 3.7E-38 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_4239 f44e9f70dcfef83270c56e7e8f080a3c 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 14 31 3.7E-38 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_4239 f44e9f70dcfef83270c56e7e8f080a3c 273 Gene3D G3DSA:3.40.50.720 3 254 3.4E-74 T 12-10-2018 JDM601_4239 f44e9f70dcfef83270c56e7e8f080a3c 273 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 1.9E-11 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_4239 f44e9f70dcfef83270c56e7e8f080a3c 273 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 1.9E-11 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_4239 f44e9f70dcfef83270c56e7e8f080a3c 273 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 137 145 1.9E-11 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_4239 f44e9f70dcfef83270c56e7e8f080a3c 273 SUPERFAMILY SSF51735 11 250 1.06E-75 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_3635 14f8ed1c66e3399050eaefbf0b5289ac 392 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 232 385 1.2E-38 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 JDM601_3635 14f8ed1c66e3399050eaefbf0b5289ac 392 Gene3D G3DSA:1.20.140.10 235 392 2.4E-41 T 12-10-2018 JDM601_3635 14f8ed1c66e3399050eaefbf0b5289ac 392 SUPERFAMILY SSF56645 3 244 1.96E-69 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 JDM601_3635 14f8ed1c66e3399050eaefbf0b5289ac 392 Gene3D G3DSA:2.40.110.10 125 234 5.6E-36 T 12-10-2018 JDM601_3635 14f8ed1c66e3399050eaefbf0b5289ac 392 SUPERFAMILY SSF47203 232 390 5.15E-24 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 JDM601_3635 14f8ed1c66e3399050eaefbf0b5289ac 392 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 126 214 1.0E-21 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 JDM601_3635 14f8ed1c66e3399050eaefbf0b5289ac 392 Gene3D G3DSA:1.10.540.10 2 121 1.1E-34 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 JDM601_3635 14f8ed1c66e3399050eaefbf0b5289ac 392 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 122 3.9E-23 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 JDM601_4178 3a9de9ff9794046905ee9d09fc207e9d 474 Pfam PF00120 Glutamine synthetase, catalytic domain 102 471 1.5E-134 T 12-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 JDM601_4178 3a9de9ff9794046905ee9d09fc207e9d 474 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 14 94 4.9E-27 T 12-10-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 JDM601_4178 3a9de9ff9794046905ee9d09fc207e9d 474 Gene3D G3DSA:3.10.20.70 2 103 2.2E-38 T 12-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 JDM601_4178 3a9de9ff9794046905ee9d09fc207e9d 474 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 261 276 - T 12-10-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 JDM601_4178 3a9de9ff9794046905ee9d09fc207e9d 474 ProSitePatterns PS00180 Glutamine synthetase signature 1. 49 67 - T 12-10-2018 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 JDM601_4178 3a9de9ff9794046905ee9d09fc207e9d 474 ProSitePatterns PS00182 Glutamine synthetase class-I adenylation site. 390 402 - T 12-10-2018 IPR001637 Glutamine synthetase class-I, adenylation site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 JDM601_4178 3a9de9ff9794046905ee9d09fc207e9d 474 SMART SM01230 101 383 1.7E-150 T 12-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 JDM601_4178 3a9de9ff9794046905ee9d09fc207e9d 474 Gene3D G3DSA:3.30.590.10 104 462 3.4E-156 T 12-10-2018 JDM601_4178 3a9de9ff9794046905ee9d09fc207e9d 474 SUPERFAMILY SSF54368 3 100 1.29E-32 T 12-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 JDM601_4178 3a9de9ff9794046905ee9d09fc207e9d 474 SUPERFAMILY SSF55931 102 474 2.45E-137 T 12-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 JDM601_4178 3a9de9ff9794046905ee9d09fc207e9d 474 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 4 473 2.8E-204 T 12-10-2018 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 JDM601_2977 b310a63b11078c2c9722621baece6a19 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 90 101 2.8E-11 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2977 b310a63b11078c2c9722621baece6a19 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 163 182 2.8E-11 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2977 b310a63b11078c2c9722621baece6a19 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 143 151 2.8E-11 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2977 b310a63b11078c2c9722621baece6a19 256 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 150 178 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 JDM601_2977 b310a63b11078c2c9722621baece6a19 256 Gene3D G3DSA:3.40.50.720 2 255 4.4E-80 T 12-10-2018 JDM601_2977 b310a63b11078c2c9722621baece6a19 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 217 237 1.6E-33 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2977 b310a63b11078c2c9722621baece6a19 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 16 33 1.6E-33 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2977 b310a63b11078c2c9722621baece6a19 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 184 201 1.6E-33 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2977 b310a63b11078c2c9722621baece6a19 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 137 153 1.6E-33 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2977 b310a63b11078c2c9722621baece6a19 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 163 182 1.6E-33 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2977 b310a63b11078c2c9722621baece6a19 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 90 101 1.6E-33 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2977 b310a63b11078c2c9722621baece6a19 256 SUPERFAMILY SSF51735 14 255 6.05E-79 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_2977 b310a63b11078c2c9722621baece6a19 256 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 23 253 1.6E-58 T 12-10-2018 JDM601_2898 89632ae847e1abb8b0e77d743e036a76 423 Pfam PF02470 MlaD protein 58 132 1.7E-13 T 12-10-2018 IPR003399 Mce/MlaD JDM601_3652 1d8ebf2d33c795249f92bb35e3dba1c6 409 Gene3D G3DSA:1.10.630.10 2 408 4.5E-124 T 12-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_3652 1d8ebf2d33c795249f92bb35e3dba1c6 409 SUPERFAMILY SSF48264 28 403 3.14E-89 T 12-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_3652 1d8ebf2d33c795249f92bb35e3dba1c6 409 PRINTS PR00385 P450 superfamily signature 342 351 5.1E-5 T 12-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_3652 1d8ebf2d33c795249f92bb35e3dba1c6 409 PRINTS PR00385 P450 superfamily signature 351 362 5.1E-5 T 12-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_3652 1d8ebf2d33c795249f92bb35e3dba1c6 409 PRINTS PR00385 P450 superfamily signature 241 258 5.1E-5 T 12-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_3652 1d8ebf2d33c795249f92bb35e3dba1c6 409 PRINTS PR00385 P450 superfamily signature 276 287 5.1E-5 T 12-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_3652 1d8ebf2d33c795249f92bb35e3dba1c6 409 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 344 353 - T 12-10-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 JDM601_3652 1d8ebf2d33c795249f92bb35e3dba1c6 409 Pfam PF00067 Cytochrome P450 188 372 1.0E-22 T 12-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_3652 1d8ebf2d33c795249f92bb35e3dba1c6 409 PRINTS PR00359 B-class P450 signature 87 98 1.8E-50 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3652 1d8ebf2d33c795249f92bb35e3dba1c6 409 PRINTS PR00359 B-class P450 signature 293 320 1.8E-50 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3652 1d8ebf2d33c795249f92bb35e3dba1c6 409 PRINTS PR00359 B-class P450 signature 351 362 1.8E-50 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3652 1d8ebf2d33c795249f92bb35e3dba1c6 409 PRINTS PR00359 B-class P450 signature 150 165 1.8E-50 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3652 1d8ebf2d33c795249f92bb35e3dba1c6 409 PRINTS PR00359 B-class P450 signature 195 217 1.8E-50 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3652 1d8ebf2d33c795249f92bb35e3dba1c6 409 PRINTS PR00359 B-class P450 signature 321 336 1.8E-50 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3652 1d8ebf2d33c795249f92bb35e3dba1c6 409 PRINTS PR00359 B-class P450 signature 133 149 1.8E-50 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3652 1d8ebf2d33c795249f92bb35e3dba1c6 409 PRINTS PR00359 B-class P450 signature 276 287 1.8E-50 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3652 1d8ebf2d33c795249f92bb35e3dba1c6 409 PRINTS PR00359 B-class P450 signature 342 351 1.8E-50 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_0370 817d5a8ff92b76ee5736d2a6d48aab69 284 Gene3D G3DSA:3.40.50.720 1 237 2.1E-70 T 12-10-2018 JDM601_0370 817d5a8ff92b76ee5736d2a6d48aab69 284 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 7.9E-13 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0370 817d5a8ff92b76ee5736d2a6d48aab69 284 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 7.9E-13 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0370 817d5a8ff92b76ee5736d2a6d48aab69 284 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 7.9E-13 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0370 817d5a8ff92b76ee5736d2a6d48aab69 284 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 188 1.3E-4 T 12-10-2018 JDM601_0370 817d5a8ff92b76ee5736d2a6d48aab69 284 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 JDM601_0370 817d5a8ff92b76ee5736d2a6d48aab69 284 SUPERFAMILY SSF51735 3 251 4.58E-70 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_0370 817d5a8ff92b76ee5736d2a6d48aab69 284 Pfam PF00106 short chain dehydrogenase 7 193 1.7E-55 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0370 817d5a8ff92b76ee5736d2a6d48aab69 284 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 2.1E-31 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0370 817d5a8ff92b76ee5736d2a6d48aab69 284 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 200 220 2.1E-31 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0370 817d5a8ff92b76ee5736d2a6d48aab69 284 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 2.1E-31 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0370 817d5a8ff92b76ee5736d2a6d48aab69 284 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 2.1E-31 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0370 817d5a8ff92b76ee5736d2a6d48aab69 284 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 2.1E-31 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0370 817d5a8ff92b76ee5736d2a6d48aab69 284 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 2.1E-31 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3385 8ff4cde026e5e44e6d9f475b58562000 272 Gene3D G3DSA:1.10.10.60 172 271 1.3E-21 T 12-10-2018 JDM601_3385 8ff4cde026e5e44e6d9f475b58562000 272 SUPERFAMILY SSF51182 22 120 1.3E-10 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily JDM601_3385 8ff4cde026e5e44e6d9f475b58562000 272 SMART SM00342 183 266 3.0E-23 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 JDM601_3385 8ff4cde026e5e44e6d9f475b58562000 272 Gene3D G3DSA:2.60.120.10 24 103 5.9E-6 T 12-10-2018 IPR014710 RmlC-like jelly roll fold JDM601_3385 8ff4cde026e5e44e6d9f475b58562000 272 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 220 262 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 JDM601_3385 8ff4cde026e5e44e6d9f475b58562000 272 Pfam PF02311 AraC-like ligand binding domain 37 120 7.6E-6 T 12-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 JDM601_3385 8ff4cde026e5e44e6d9f475b58562000 272 SUPERFAMILY SSF46689 220 269 4.3E-10 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JDM601_3385 8ff4cde026e5e44e6d9f475b58562000 272 Pfam PF12833 Helix-turn-helix domain 191 268 3.3E-22 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 JDM601_1037 76fb5523c1acf3a015a9a0d467ca7798 290 Gene3D G3DSA:3.40.50.300 1 290 2.1E-89 T 12-10-2018 JDM601_1037 76fb5523c1acf3a015a9a0d467ca7798 290 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 70 207 6.2E-11 T 12-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 JDM601_1037 76fb5523c1acf3a015a9a0d467ca7798 290 Hamap MF_00215 Pantothenate kinase [coaA]. 1 290 163.648 T 12-10-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 JDM601_1037 76fb5523c1acf3a015a9a0d467ca7798 290 TIGRFAM TIGR00554 panK_bact: pantothenate kinase 2 289 4.3E-112 T 12-10-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 JDM601_1037 76fb5523c1acf3a015a9a0d467ca7798 290 PIRSF PIRSF000545 1 290 4.0E-132 T 12-10-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 JDM601_1037 76fb5523c1acf3a015a9a0d467ca7798 290 SUPERFAMILY SSF52540 3 288 3.55E-64 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_3703 a15901a45105b5915e0276bc3815df8c 239 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 154 2.2E-12 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3703 a15901a45105b5915e0276bc3815df8c 239 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 61 72 2.2E-12 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3703 a15901a45105b5915e0276bc3815df8c 239 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 115 123 2.2E-12 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3703 a15901a45105b5915e0276bc3815df8c 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 190 210 2.6E-32 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3703 a15901a45105b5915e0276bc3815df8c 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 172 2.6E-32 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3703 a15901a45105b5915e0276bc3815df8c 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 61 72 2.6E-32 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3703 a15901a45105b5915e0276bc3815df8c 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 109 125 2.6E-32 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3703 a15901a45105b5915e0276bc3815df8c 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 2 19 2.6E-32 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3703 a15901a45105b5915e0276bc3815df8c 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 135 154 2.6E-32 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3703 a15901a45105b5915e0276bc3815df8c 239 Gene3D G3DSA:3.40.50.720 1 228 3.2E-63 T 12-10-2018 JDM601_3703 a15901a45105b5915e0276bc3815df8c 239 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 122 150 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 JDM601_3703 a15901a45105b5915e0276bc3815df8c 239 SUPERFAMILY SSF51735 1 225 1.84E-65 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_3703 a15901a45105b5915e0276bc3815df8c 239 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 5 225 1.2E-51 T 12-10-2018 JDM601_3166 dcbdc21b07487785c00f5d2b4e259d17 404 PIRSF PIRSF036428 3 403 9.9E-123 T 12-10-2018 IPR006365 Cobalamin (vitamin B12) biosynthesis CobL/Precorrin-6Y C(5,15)-methyltransferase GO:0008276|GO:0009236 KEGG: 00860+2.1.1.132 JDM601_3166 dcbdc21b07487785c00f5d2b4e259d17 404 SUPERFAMILY SSF53790 8 209 1.57E-32 T 12-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 JDM601_3166 dcbdc21b07487785c00f5d2b4e259d17 404 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 7 190 3.2E-17 T 12-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 JDM601_3166 dcbdc21b07487785c00f5d2b4e259d17 404 TIGRFAM TIGR02467 CbiE: precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit 10 206 2.0E-36 T 12-10-2018 IPR012818 Cobalamin (vitamin B12) biosynthesis CbiE, precorrin-6Y methyltransferase GO:0008276|GO:0009236 JDM601_3166 dcbdc21b07487785c00f5d2b4e259d17 404 SUPERFAMILY SSF53335 222 399 3.93E-27 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JDM601_3166 dcbdc21b07487785c00f5d2b4e259d17 404 TIGRFAM TIGR02469 CbiT: precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit 233 351 7.3E-30 T 12-10-2018 IPR014008 Cobalamin biosynthesis, precorrin-6Y methyltransferase, CbiT subunit GO:0008276|GO:0009236 KEGG: 00860+2.1.1.196|MetaCyc: PWY-7377 JDM601_3166 dcbdc21b07487785c00f5d2b4e259d17 404 Gene3D G3DSA:3.40.1010.10 4 109 5.4E-21 T 12-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 JDM601_3166 dcbdc21b07487785c00f5d2b4e259d17 404 Gene3D G3DSA:3.40.50.150 227 402 4.6E-68 T 12-10-2018 JDM601_0450 d38e5ed43a8fe782824e51815134ae96 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 135 153 3.8E-34 T 12-10-2018 JDM601_0450 d38e5ed43a8fe782824e51815134ae96 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 173 191 3.8E-34 T 12-10-2018 JDM601_0450 d38e5ed43a8fe782824e51815134ae96 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 262 278 3.8E-34 T 12-10-2018 JDM601_0450 d38e5ed43a8fe782824e51815134ae96 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 291 313 3.8E-34 T 12-10-2018 JDM601_0450 d38e5ed43a8fe782824e51815134ae96 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 3.8E-34 T 12-10-2018 JDM601_0450 d38e5ed43a8fe782824e51815134ae96 466 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 347 454 5.7E-35 T 12-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 JDM601_0450 d38e5ed43a8fe782824e51815134ae96 466 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 3 465 1.6E-160 T 12-10-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 JDM601_0450 d38e5ed43a8fe782824e51815134ae96 466 SUPERFAMILY SSF51905 2 369 4.32E-60 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_0450 d38e5ed43a8fe782824e51815134ae96 466 Gene3D G3DSA:3.30.390.30 345 466 7.8E-46 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 JDM601_0450 d38e5ed43a8fe782824e51815134ae96 466 Gene3D G3DSA:3.50.50.60 147 269 3.5E-125 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_0450 d38e5ed43a8fe782824e51815134ae96 466 PIRSF PIRSF000350 1 459 4.4E-86 T 12-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 JDM601_0450 d38e5ed43a8fe782824e51815134ae96 466 SUPERFAMILY SSF55424 343 465 1.27E-38 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 JDM601_0450 d38e5ed43a8fe782824e51815134ae96 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 9.1E-66 T 12-10-2018 JDM601_0450 d38e5ed43a8fe782824e51815134ae96 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 37 52 9.1E-66 T 12-10-2018 JDM601_0450 d38e5ed43a8fe782824e51815134ae96 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 173 198 9.1E-66 T 12-10-2018 JDM601_0450 d38e5ed43a8fe782824e51815134ae96 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 343 364 9.1E-66 T 12-10-2018 JDM601_0450 d38e5ed43a8fe782824e51815134ae96 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 138 147 9.1E-66 T 12-10-2018 JDM601_0450 d38e5ed43a8fe782824e51815134ae96 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 430 450 9.1E-66 T 12-10-2018 JDM601_0450 d38e5ed43a8fe782824e51815134ae96 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 306 313 9.1E-66 T 12-10-2018 JDM601_0450 d38e5ed43a8fe782824e51815134ae96 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 263 277 9.1E-66 T 12-10-2018 JDM601_0450 d38e5ed43a8fe782824e51815134ae96 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 408 423 9.1E-66 T 12-10-2018 JDM601_0450 d38e5ed43a8fe782824e51815134ae96 466 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 4 326 3.1E-64 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JDM601_0450 d38e5ed43a8fe782824e51815134ae96 466 Gene3D G3DSA:3.50.50.60 4 331 3.5E-125 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_0450 d38e5ed43a8fe782824e51815134ae96 466 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 38 48 - T 12-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 JDM601_3057 284d1ef4fc5b9074cdfd6c5142a242cb 516 Pfam PF02720 Domain of unknown function (DUF222) 42 366 3.1E-76 T 12-10-2018 IPR003870 Domain of unknown function DUF222 JDM601_3057 284d1ef4fc5b9074cdfd6c5142a242cb 516 ProDom PD008243 RV1792C/MT1741/MB1728C RV1945/MT1995 MB1980 MB0098C RV3466/MT3572 VERY RV1128C/MT1160 RV1148C/MT1183 MB1159C RV0095C 9 74 0.002 T 12-10-2018 JDM601_0279 c553d0d8dca8b71a63957685feca6563 272 PIRSF PIRSF015626 1 272 8.2E-87 T 12-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 JDM601_0279 c553d0d8dca8b71a63957685feca6563 272 Gene3D G3DSA:3.40.140.10 122 272 2.3E-53 T 12-10-2018 JDM601_0279 c553d0d8dca8b71a63957685feca6563 272 Pfam PF02634 FdhD/NarQ family 26 270 1.8E-81 T 12-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 JDM601_0279 c553d0d8dca8b71a63957685feca6563 272 TIGRFAM TIGR00129 fdhD_narQ: formate dehydrogenase family accessory protein FdhD 22 270 4.0E-48 T 12-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 JDM601_0279 c553d0d8dca8b71a63957685feca6563 272 Gene3D G3DSA:3.10.20.10 28 118 1.0E-5 T 12-10-2018 JDM601_0279 c553d0d8dca8b71a63957685feca6563 272 Hamap MF_00187 Sulfur carrier protein FdhD [fdhD]. 2 271 33.675 T 12-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 JDM601_0279 c553d0d8dca8b71a63957685feca6563 272 SUPERFAMILY SSF53927 5 271 5.11E-80 T 12-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 JDM601_1505 f9fbabbdcfe61c51f67cee5422ba9d74 142 SUPERFAMILY SSF54631 1 139 4.93E-31 T 12-10-2018 JDM601_1505 f9fbabbdcfe61c51f67cee5422ba9d74 142 Gene3D G3DSA:3.10.580.10 1 141 2.5E-42 T 12-10-2018 JDM601_1505 f9fbabbdcfe61c51f67cee5422ba9d74 142 SMART SM00116 13 60 3.0E-4 T 12-10-2018 IPR000644 CBS domain JDM601_1505 f9fbabbdcfe61c51f67cee5422ba9d74 142 SMART SM00116 78 125 5.6E-7 T 12-10-2018 IPR000644 CBS domain JDM601_1505 f9fbabbdcfe61c51f67cee5422ba9d74 142 Pfam PF00571 CBS domain 71 123 8.5E-10 T 12-10-2018 IPR000644 CBS domain JDM601_1505 f9fbabbdcfe61c51f67cee5422ba9d74 142 Pfam PF00571 CBS domain 14 59 6.6E-7 T 12-10-2018 IPR000644 CBS domain JDM601_2946 f7dedfd4e493ebb045f9bffc32beec5a 208 SUPERFAMILY SSF46689 15 91 5.64E-20 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JDM601_2946 f7dedfd4e493ebb045f9bffc32beec5a 208 ProSitePatterns PS01081 TetR-type HTH domain signature. 38 69 - T 12-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site JDM601_2946 f7dedfd4e493ebb045f9bffc32beec5a 208 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 47 70 9.8E-9 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_2946 f7dedfd4e493ebb045f9bffc32beec5a 208 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 26 39 9.8E-9 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_2946 f7dedfd4e493ebb045f9bffc32beec5a 208 Gene3D G3DSA:1.10.10.60 9 68 3.0E-18 T 12-10-2018 JDM601_2946 f7dedfd4e493ebb045f9bffc32beec5a 208 Pfam PF00440 Bacterial regulatory proteins, tetR family 26 71 3.4E-18 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_2946 f7dedfd4e493ebb045f9bffc32beec5a 208 Gene3D G3DSA:1.10.357.10 69 207 6.1E-21 T 12-10-2018 JDM601_2946 f7dedfd4e493ebb045f9bffc32beec5a 208 SUPERFAMILY SSF48498 94 207 1.97E-13 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily JDM601_3043 9871e86b42771a275da0157861933a44 296 SUPERFAMILY SSF52821 14 153 2.49E-35 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily JDM601_3043 9871e86b42771a275da0157861933a44 296 Gene3D G3DSA:3.40.250.10 156 296 1.7E-43 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily JDM601_3043 9871e86b42771a275da0157861933a44 296 SUPERFAMILY SSF52821 163 288 7.99E-32 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily JDM601_3043 9871e86b42771a275da0157861933a44 296 Gene3D G3DSA:3.40.250.10 3 155 3.0E-43 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily JDM601_3043 9871e86b42771a275da0157861933a44 296 SMART SM00450 158 283 2.1E-20 T 12-10-2018 IPR001763 Rhodanese-like domain JDM601_3043 9871e86b42771a275da0157861933a44 296 SMART SM00450 21 135 2.4E-19 T 12-10-2018 IPR001763 Rhodanese-like domain JDM601_3043 9871e86b42771a275da0157861933a44 296 ProSitePatterns PS00683 Rhodanese C-terminal signature. 267 277 - T 12-10-2018 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350|MetaCyc: PWY-7927|Reactome: R-HSA-1614558 JDM601_3043 9871e86b42771a275da0157861933a44 296 ProSitePatterns PS00380 Rhodanese signature 1. 47 58 - T 12-10-2018 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350|MetaCyc: PWY-7927|Reactome: R-HSA-1614558 JDM601_3043 9871e86b42771a275da0157861933a44 296 Pfam PF00581 Rhodanese-like domain 22 131 1.0E-13 T 12-10-2018 IPR001763 Rhodanese-like domain JDM601_3043 9871e86b42771a275da0157861933a44 296 Pfam PF00581 Rhodanese-like domain 164 279 8.9E-14 T 12-10-2018 IPR001763 Rhodanese-like domain JDM601_2787 a936aa269539da850da846bf37ec9e84 704 TIGRFAM TIGR04170 RNR_1b_NrdE: ribonucleoside-diphosphate reductase, class 1b, alpha subunit 5 704 0.0 T 12-10-2018 IPR026459 Ribonucleotide reductase, class 1b, subunit NrdE KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 JDM601_2787 a936aa269539da850da846bf37ec9e84 704 PRINTS PR01183 Ribonucleotide reductase large chain signature 455 477 8.6E-34 T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 JDM601_2787 a936aa269539da850da846bf37ec9e84 704 PRINTS PR01183 Ribonucleotide reductase large chain signature 241 260 8.6E-34 T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 JDM601_2787 a936aa269539da850da846bf37ec9e84 704 PRINTS PR01183 Ribonucleotide reductase large chain signature 372 383 8.6E-34 T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 JDM601_2787 a936aa269539da850da846bf37ec9e84 704 PRINTS PR01183 Ribonucleotide reductase large chain signature 483 506 8.6E-34 T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 JDM601_2787 a936aa269539da850da846bf37ec9e84 704 PRINTS PR01183 Ribonucleotide reductase large chain signature 567 594 8.6E-34 T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 JDM601_2787 a936aa269539da850da846bf37ec9e84 704 PRINTS PR01183 Ribonucleotide reductase large chain signature 416 439 8.6E-34 T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 JDM601_2787 a936aa269539da850da846bf37ec9e84 704 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 556 578 - T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 JDM601_2787 a936aa269539da850da846bf37ec9e84 704 SUPERFAMILY SSF51998 166 688 1.16E-185 T 12-10-2018 JDM601_2787 a936aa269539da850da846bf37ec9e84 704 Pfam PF02867 Ribonucleotide reductase, barrel domain 166 683 3.9E-143 T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 JDM601_2787 a936aa269539da850da846bf37ec9e84 704 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 89 161 1.6E-11 T 12-10-2018 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 JDM601_2787 a936aa269539da850da846bf37ec9e84 704 Pfam PF08343 Ribonucleotide reductase N-terminal 6 87 1.6E-30 T 12-10-2018 IPR013554 Ribonucleotide reductase N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 JDM601_2787 a936aa269539da850da846bf37ec9e84 704 SUPERFAMILY SSF48168 5 164 1.96E-61 T 12-10-2018 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 JDM601_2787 a936aa269539da850da846bf37ec9e84 704 Gene3D G3DSA:1.10.1650.20 284 335 3.3E-29 T 12-10-2018 JDM601_2787 a936aa269539da850da846bf37ec9e84 704 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 93 686 6.2E-159 T 12-10-2018 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 JDM601_0533 3a6e6f5c575f49c8c86c2676d1d4c0a4 258 TIGRFAM TIGR01694 MTAP: methylthioadenosine phosphorylase 1 234 4.8E-90 T 12-10-2018 IPR010044 Methylthioadenosine phosphorylase (MTAP) GO:0017061 Reactome: R-HSA-1237112|Reactome: R-HSA-8950505 JDM601_0533 3a6e6f5c575f49c8c86c2676d1d4c0a4 258 Pfam PF01048 Phosphorylase superfamily 3 208 3.2E-37 T 12-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 JDM601_0533 3a6e6f5c575f49c8c86c2676d1d4c0a4 258 SUPERFAMILY SSF53167 1 250 1.78E-72 T 12-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 JDM601_0533 3a6e6f5c575f49c8c86c2676d1d4c0a4 258 Hamap MF_01963 S-methyl-5'-thioadenosine phosphorylase [mtnP]. 1 253 37.139 T 12-10-2018 IPR010044 Methylthioadenosine phosphorylase (MTAP) GO:0017061 Reactome: R-HSA-1237112|Reactome: R-HSA-8950505 JDM601_0533 3a6e6f5c575f49c8c86c2676d1d4c0a4 258 Gene3D G3DSA:3.40.50.1580 1 251 1.4E-80 T 12-10-2018 JDM601_2502 7203daa210e116e2a2f8f8faeabadb71 560 Gene3D G3DSA:3.40.50.10710 216 374 4.7E-163 T 12-10-2018 JDM601_2502 7203daa210e116e2a2f8f8faeabadb71 560 Pfam PF12706 Beta-lactamase superfamily domain 67 174 4.9E-11 T 12-10-2018 IPR001279 Metallo-beta-lactamase JDM601_2502 7203daa210e116e2a2f8f8faeabadb71 560 TIGRFAM TIGR00649 MG423: beta-CASP ribonuclease, RNase J family 19 557 6.2E-131 T 12-10-2018 IPR004613 Ribonuclease J GO:0003723|GO:0046872 JDM601_2502 7203daa210e116e2a2f8f8faeabadb71 560 SUPERFAMILY SSF56281 18 433 1.97E-88 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like JDM601_2502 7203daa210e116e2a2f8f8faeabadb71 560 Gene3D G3DSA:3.60.15.10 19 445 4.7E-163 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like JDM601_2502 7203daa210e116e2a2f8f8faeabadb71 560 SMART SM00849 30 224 2.7E-22 T 12-10-2018 IPR001279 Metallo-beta-lactamase JDM601_2502 7203daa210e116e2a2f8f8faeabadb71 560 Hamap MF_01491 Ribonuclease J [rnj]. 13 560 39.549 T 12-10-2018 IPR030854 Ribonuclease J, bacteria GO:0004521|GO:0004534|GO:0006396|GO:0008270|GO:0090501 JDM601_2502 7203daa210e116e2a2f8f8faeabadb71 560 Gene3D G3DSA:3.10.20.580 458 560 1.1E-14 T 12-10-2018 JDM601_2502 7203daa210e116e2a2f8f8faeabadb71 560 PIRSF PIRSF004803 13 560 1.3E-181 T 12-10-2018 IPR030854 Ribonuclease J, bacteria GO:0004521|GO:0004534|GO:0006396|GO:0008270|GO:0090501 JDM601_2502 7203daa210e116e2a2f8f8faeabadb71 560 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 370 414 4.7E-10 T 12-10-2018 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain JDM601_2848 4003a31dd290276789e82882d8737116 270 Gene3D G3DSA:3.40.190.80 155 268 2.3E-23 T 12-10-2018 JDM601_2848 4003a31dd290276789e82882d8737116 270 Gene3D G3DSA:3.30.540.10 3 145 4.4E-42 T 12-10-2018 JDM601_2848 4003a31dd290276789e82882d8737116 270 PRINTS PR00377 Inositol monophosphatase superfamily signature 90 106 4.2E-24 T 12-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 JDM601_2848 4003a31dd290276789e82882d8737116 270 PRINTS PR00377 Inositol monophosphatase superfamily signature 219 243 4.2E-24 T 12-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 JDM601_2848 4003a31dd290276789e82882d8737116 270 PRINTS PR00377 Inositol monophosphatase superfamily signature 48 68 4.2E-24 T 12-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 JDM601_2848 4003a31dd290276789e82882d8737116 270 PRINTS PR00377 Inositol monophosphatase superfamily signature 144 167 4.2E-24 T 12-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 JDM601_2848 4003a31dd290276789e82882d8737116 270 PRINTS PR00377 Inositol monophosphatase superfamily signature 70 86 4.2E-24 T 12-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 JDM601_2848 4003a31dd290276789e82882d8737116 270 Pfam PF00459 Inositol monophosphatase family 17 266 2.3E-50 T 12-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 JDM601_2848 4003a31dd290276789e82882d8737116 270 SUPERFAMILY SSF56655 12 267 3.01E-77 T 12-10-2018 JDM601_2848 4003a31dd290276789e82882d8737116 270 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 90 103 - T 12-10-2018 IPR020583 Inositol monophosphatase, metal-binding site JDM601_2848 4003a31dd290276789e82882d8737116 270 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 222 236 - T 12-10-2018 IPR020550 Inositol monophosphatase, conserved site GO:0046854 JDM601_2848 4003a31dd290276789e82882d8737116 270 TIGRFAM TIGR02067 his_9_HisN: histidinol-phosphatase 16 267 1.6E-89 T 12-10-2018 IPR011809 Histidinol-phosphate phosphatase, putative, inositol monophosphatase GO:0004401 KEGG: 00340+3.1.3.15 JDM601_1682 f4fda720ed04f490df08f4526d6861aa 478 SMART SM01230 105 387 3.1E-145 T 12-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 JDM601_1682 f4fda720ed04f490df08f4526d6861aa 478 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 265 280 - T 12-10-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 JDM601_1682 f4fda720ed04f490df08f4526d6861aa 478 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 8 477 3.7E-200 T 12-10-2018 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 JDM601_1682 f4fda720ed04f490df08f4526d6861aa 478 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 17 98 2.7E-27 T 12-10-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 JDM601_1682 f4fda720ed04f490df08f4526d6861aa 478 ProSitePatterns PS00182 Glutamine synthetase class-I adenylation site. 394 406 - T 12-10-2018 IPR001637 Glutamine synthetase class-I, adenylation site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 JDM601_1682 f4fda720ed04f490df08f4526d6861aa 478 SUPERFAMILY SSF55931 106 478 1.18E-135 T 12-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 JDM601_1682 f4fda720ed04f490df08f4526d6861aa 478 ProSitePatterns PS00180 Glutamine synthetase signature 1. 53 71 - T 12-10-2018 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 JDM601_1682 f4fda720ed04f490df08f4526d6861aa 478 SUPERFAMILY SSF54368 5 104 1.57E-33 T 12-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 JDM601_1682 f4fda720ed04f490df08f4526d6861aa 478 Gene3D G3DSA:3.30.590.10 108 466 4.4E-151 T 12-10-2018 JDM601_1682 f4fda720ed04f490df08f4526d6861aa 478 Pfam PF00120 Glutamine synthetase, catalytic domain 106 475 1.8E-131 T 12-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 JDM601_1682 f4fda720ed04f490df08f4526d6861aa 478 Gene3D G3DSA:3.10.20.70 5 107 4.0E-40 T 12-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 JDM601_3745 73fea8ab9c6e8bead1fb93984d565ac8 395 Gene3D G3DSA:3.40.47.10 1 392 7.6E-98 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 JDM601_3745 73fea8ab9c6e8bead1fb93984d565ac8 395 Pfam PF00108 Thiolase, N-terminal domain 1 181 2.6E-15 T 12-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 JDM601_3745 73fea8ab9c6e8bead1fb93984d565ac8 395 Pfam PF02803 Thiolase, C-terminal domain 269 368 4.2E-11 T 12-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 JDM601_3745 73fea8ab9c6e8bead1fb93984d565ac8 395 PIRSF PIRSF000429 1 392 4.8E-51 T 12-10-2018 IPR002155 Thiolase GO:0016747 JDM601_3745 73fea8ab9c6e8bead1fb93984d565ac8 395 ProSitePatterns PS00737 Thiolases signature 2. 332 348 - T 12-10-2018 IPR020613 Thiolase, conserved site GO:0016747 JDM601_3745 73fea8ab9c6e8bead1fb93984d565ac8 395 SUPERFAMILY SSF53901 11 391 6.39E-39 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 JDM601_4335 df90ab43bb158fc3c57d5c8429469b8c 206 SUPERFAMILY SSF88659 111 172 2.4E-13 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like JDM601_4335 df90ab43bb158fc3c57d5c8429469b8c 206 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 21 170 1.8E-22 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 JDM601_4335 df90ab43bb158fc3c57d5c8429469b8c 206 Gene3D G3DSA:1.10.1740.10 3 116 1.4E-28 T 12-10-2018 JDM601_4335 df90ab43bb158fc3c57d5c8429469b8c 206 Pfam PF08281 Sigma-70, region 4 117 168 1.2E-13 T 12-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 JDM601_4335 df90ab43bb158fc3c57d5c8429469b8c 206 SUPERFAMILY SSF88946 4 105 1.19E-29 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 JDM601_4335 df90ab43bb158fc3c57d5c8429469b8c 206 Pfam PF04542 Sigma-70 region 2 26 92 3.9E-18 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 JDM601_4335 df90ab43bb158fc3c57d5c8429469b8c 206 Gene3D G3DSA:1.10.10.10 117 178 5.7E-17 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JDM601_3333 5758bb56ace59c24da584fba489ed9d4 199 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 12 114 2.3E-48 T 12-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JDM601_3333 5758bb56ace59c24da584fba489ed9d4 199 Pfam PF00237 Ribosomal protein L22p/L17e 12 114 7.3E-35 T 12-10-2018 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 JDM601_3333 5758bb56ace59c24da584fba489ed9d4 199 ProSitePatterns PS00464 Ribosomal protein L22 signature. 90 114 - T 12-10-2018 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JDM601_3333 5758bb56ace59c24da584fba489ed9d4 199 Gene3D G3DSA:3.90.470.10 6 139 3.7E-46 T 12-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 JDM601_3333 5758bb56ace59c24da584fba489ed9d4 199 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 8 117 28.519 T 12-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JDM601_3333 5758bb56ace59c24da584fba489ed9d4 199 SUPERFAMILY SSF54843 8 117 2.49E-40 T 12-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 JDM601_3707 d592a13aab07d9d8174e9b9432aa3d1a 356 Pfam PF03060 Nitronate monooxygenase 5 343 6.6E-101 T 12-10-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 JDM601_3707 d592a13aab07d9d8174e9b9432aa3d1a 356 SUPERFAMILY SSF51412 4 349 6.26E-59 T 12-10-2018 JDM601_3707 d592a13aab07d9d8174e9b9432aa3d1a 356 Gene3D G3DSA:3.20.20.70 4 355 1.5E-92 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JDM601_2905 c7d4a8e94fc251fe65eeb9c5ef250ccc 980 Pfam PF03699 Uncharacterised protein family (UPF0182) 15 813 4.8E-264 T 12-10-2018 IPR005372 Uncharacterised protein family UPF0182 GO:0016021 JDM601_2905 c7d4a8e94fc251fe65eeb9c5ef250ccc 980 Hamap MF_01600 UPF0182 protein . 3 897 17.465 T 12-10-2018 IPR005372 Uncharacterised protein family UPF0182 GO:0016021 JDM601_1500 5859244b054132a6e23f29d8267d5ab8 283 Pfam PF10531 SLBB domain 123 175 3.4E-9 T 12-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 JDM601_1500 5859244b054132a6e23f29d8267d5ab8 283 Gene3D G3DSA:3.10.560.10 113 181 9.7E-6 T 12-10-2018 JDM601_1500 5859244b054132a6e23f29d8267d5ab8 283 TIGRFAM TIGR00426 TIGR00426: competence protein ComEA helix-hairpin-helix repeat region 220 281 1.6E-17 T 12-10-2018 IPR004509 Competence protein ComEA, helix-hairpin-helix domain JDM601_1500 5859244b054132a6e23f29d8267d5ab8 283 Pfam PF12836 Helix-hairpin-helix motif 220 282 9.8E-22 T 12-10-2018 JDM601_1500 5859244b054132a6e23f29d8267d5ab8 283 SMART SM00278 261 280 87.0 T 12-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 JDM601_1500 5859244b054132a6e23f29d8267d5ab8 283 SMART SM00278 231 250 0.011 T 12-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 JDM601_1500 5859244b054132a6e23f29d8267d5ab8 283 Gene3D G3DSA:1.10.150.320 207 282 2.0E-24 T 12-10-2018 JDM601_1500 5859244b054132a6e23f29d8267d5ab8 283 SUPERFAMILY SSF47781 204 280 4.0E-27 T 12-10-2018 IPR010994 RuvA domain 2-like JDM601_1746 119d4a733ef8f87c6f6e10b2cad2d97c 387 Gene3D G3DSA:3.30.1330.20 218 322 1.6E-38 T 12-10-2018 IPR037103 Tubulin/FtsZ, C-terminal domain superfamily Reactome: R-HSA-380320 JDM601_1746 119d4a733ef8f87c6f6e10b2cad2d97c 387 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 6 324 38.013 T 12-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 JDM601_1746 119d4a733ef8f87c6f6e10b2cad2d97c 387 SUPERFAMILY SSF55307 201 314 1.51E-42 T 12-10-2018 IPR008280 Tubulin/FtsZ, C-terminal Reactome: R-HSA-380320 JDM601_1746 119d4a733ef8f87c6f6e10b2cad2d97c 387 SMART SM00865 204 321 1.3E-54 T 12-10-2018 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-380320 JDM601_1746 119d4a733ef8f87c6f6e10b2cad2d97c 387 ProSitePatterns PS01134 FtsZ protein signature 1. 41 75 - T 12-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 JDM601_1746 119d4a733ef8f87c6f6e10b2cad2d97c 387 SUPERFAMILY SSF52490 9 205 1.7E-66 T 12-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 JDM601_1746 119d4a733ef8f87c6f6e10b2cad2d97c 387 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 11 169 1.5E-39 T 12-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 JDM601_1746 119d4a733ef8f87c6f6e10b2cad2d97c 387 PRINTS PR00423 Cell division protein FtsZ signature 186 208 8.0E-51 T 12-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 JDM601_1746 119d4a733ef8f87c6f6e10b2cad2d97c 387 PRINTS PR00423 Cell division protein FtsZ signature 123 144 8.0E-51 T 12-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 JDM601_1746 119d4a733ef8f87c6f6e10b2cad2d97c 387 PRINTS PR00423 Cell division protein FtsZ signature 95 115 8.0E-51 T 12-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 JDM601_1746 119d4a733ef8f87c6f6e10b2cad2d97c 387 PRINTS PR00423 Cell division protein FtsZ signature 209 230 8.0E-51 T 12-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 JDM601_1746 119d4a733ef8f87c6f6e10b2cad2d97c 387 Gene3D G3DSA:3.40.50.1440 1 217 6.9E-82 T 12-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 JDM601_1746 119d4a733ef8f87c6f6e10b2cad2d97c 387 ProSitePatterns PS01135 FtsZ protein signature 2. 94 115 - T 12-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 JDM601_1746 119d4a733ef8f87c6f6e10b2cad2d97c 387 SMART SM00864 10 202 4.0E-107 T 12-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 JDM601_1746 119d4a733ef8f87c6f6e10b2cad2d97c 387 Pfam PF12327 FtsZ family, C-terminal domain 219 313 4.6E-35 T 12-10-2018 IPR024757 Cell division protein FtsZ, C-terminal JDM601_1746 119d4a733ef8f87c6f6e10b2cad2d97c 387 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 8 315 3.0E-125 T 12-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 JDM601_1396 79c4f0d9798167f26f5d40e329e97582 266 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 JDM601_1396 79c4f0d9798167f26f5d40e329e97582 266 Pfam PF00106 short chain dehydrogenase 10 195 6.3E-38 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_1396 79c4f0d9798167f26f5d40e329e97582 266 PIRSF PIRSF000126 3 264 4.8E-67 T 12-10-2018 JDM601_1396 79c4f0d9798167f26f5d40e329e97582 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 4.2E-17 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_1396 79c4f0d9798167f26f5d40e329e97582 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 4.2E-17 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_1396 79c4f0d9798167f26f5d40e329e97582 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 4.2E-17 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_1396 79c4f0d9798167f26f5d40e329e97582 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 4.2E-17 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_1396 79c4f0d9798167f26f5d40e329e97582 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 4.2E-17 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_1396 79c4f0d9798167f26f5d40e329e97582 266 Gene3D G3DSA:3.40.50.720 6 258 4.9E-50 T 12-10-2018 JDM601_1396 79c4f0d9798167f26f5d40e329e97582 266 SUPERFAMILY SSF51735 8 255 3.22E-51 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_3871 db2f47d0317f4db8d3edac0f3e9094ad 469 SMART SM00840 342 403 1.1E-10 T 12-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 JDM601_3871 db2f47d0317f4db8d3edac0f3e9094ad 469 Pfam PF09190 DALR domain 342 394 4.0E-6 T 12-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 JDM601_3871 db2f47d0317f4db8d3edac0f3e9094ad 469 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 193 211 2.3E-26 T 12-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 JDM601_3871 db2f47d0317f4db8d3edac0f3e9094ad 469 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 30 41 2.3E-26 T 12-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 JDM601_3871 db2f47d0317f4db8d3edac0f3e9094ad 469 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 66 75 2.3E-26 T 12-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 JDM601_3871 db2f47d0317f4db8d3edac0f3e9094ad 469 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 224 245 2.3E-26 T 12-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 JDM601_3871 db2f47d0317f4db8d3edac0f3e9094ad 469 SUPERFAMILY SSF47323 321 462 1.44E-28 T 12-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 JDM601_3871 db2f47d0317f4db8d3edac0f3e9094ad 469 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 7 461 2.8E-129 T 12-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 JDM601_3871 db2f47d0317f4db8d3edac0f3e9094ad 469 Gene3D G3DSA:1.20.120.640 307 463 1.3E-26 T 12-10-2018 JDM601_3871 db2f47d0317f4db8d3edac0f3e9094ad 469 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 21 314 7.7E-127 T 12-10-2018 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 JDM601_3871 db2f47d0317f4db8d3edac0f3e9094ad 469 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 7 464 34.76 T 12-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 JDM601_3871 db2f47d0317f4db8d3edac0f3e9094ad 469 Gene3D G3DSA:3.40.50.620 1 306 9.8E-123 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JDM601_3871 db2f47d0317f4db8d3edac0f3e9094ad 469 SUPERFAMILY SSF52374 8 315 9.12E-93 T 12-10-2018 JDM601_4222 a4d2d2d0d3136dfb6ec237e01c84bc8b 311 Gene3D G3DSA:3.40.50.720 1 295 4.6E-66 T 12-10-2018 JDM601_4222 a4d2d2d0d3136dfb6ec237e01c84bc8b 311 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 8.2E-17 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_4222 a4d2d2d0d3136dfb6ec237e01c84bc8b 311 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 131 147 8.2E-17 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_4222 a4d2d2d0d3136dfb6ec237e01c84bc8b 311 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 165 184 8.2E-17 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_4222 a4d2d2d0d3136dfb6ec237e01c84bc8b 311 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 8.2E-17 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_4222 a4d2d2d0d3136dfb6ec237e01c84bc8b 311 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 152 180 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 JDM601_4222 a4d2d2d0d3136dfb6ec237e01c84bc8b 311 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 137 145 5.8E-5 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_4222 a4d2d2d0d3136dfb6ec237e01c84bc8b 311 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 165 184 5.8E-5 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_4222 a4d2d2d0d3136dfb6ec237e01c84bc8b 311 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 5.8E-5 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_4222 a4d2d2d0d3136dfb6ec237e01c84bc8b 311 Pfam PF00106 short chain dehydrogenase 7 211 8.2E-41 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_4222 a4d2d2d0d3136dfb6ec237e01c84bc8b 311 SUPERFAMILY SSF51735 1 276 3.42E-55 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_1857 6e63b60533c8b1f22d8b27c2305b434f 318 Hamap MF_01807 Tyrosine recombinase XerD [xerD]. 11 317 57.704 T 12-10-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 JDM601_1857 6e63b60533c8b1f22d8b27c2305b434f 318 Gene3D G3DSA:1.10.150.130 12 113 1.8E-14 T 12-10-2018 IPR010998 Integrase/recombinase, N-terminal JDM601_1857 6e63b60533c8b1f22d8b27c2305b434f 318 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 15 105 3.5E-21 T 12-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 JDM601_1857 6e63b60533c8b1f22d8b27c2305b434f 318 SUPERFAMILY SSF56349 122 314 3.24E-54 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 JDM601_1857 6e63b60533c8b1f22d8b27c2305b434f 318 SUPERFAMILY SSF47823 15 110 4.12E-14 T 12-10-2018 JDM601_1857 6e63b60533c8b1f22d8b27c2305b434f 318 Gene3D G3DSA:1.10.443.10 126 310 9.0E-61 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 JDM601_1857 6e63b60533c8b1f22d8b27c2305b434f 318 Pfam PF00589 Phage integrase family 127 301 3.0E-46 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 JDM601_1857 6e63b60533c8b1f22d8b27c2305b434f 318 TIGRFAM TIGR02225 recomb_XerD: tyrosine recombinase XerD 17 317 1.1E-101 T 12-10-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 JDM601_1857 6e63b60533c8b1f22d8b27c2305b434f 318 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 13 317 53.735 T 12-10-2018 IPR023009 Tyrosine recombinase XerC/XerD JDM601_1820 a362f4705c8317405184834e7a87c823 177 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 56 139 1.2E-31 T 12-10-2018 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 JDM601_1820 a362f4705c8317405184834e7a87c823 177 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 2 47 1.3E-19 T 12-10-2018 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 JDM601_1820 a362f4705c8317405184834e7a87c823 177 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 1 140 2.6E-51 T 12-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 JDM601_1820 a362f4705c8317405184834e7a87c823 177 Gene3D G3DSA:3.30.110.10 48 142 5.3E-32 T 12-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 JDM601_1820 a362f4705c8317405184834e7a87c823 177 SUPERFAMILY SSF54364 2 50 3.66E-18 T 12-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 JDM601_1820 a362f4705c8317405184834e7a87c823 177 Gene3D G3DSA:3.10.20.80 1 47 3.2E-20 T 12-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 JDM601_1820 a362f4705c8317405184834e7a87c823 177 ProSitePatterns PS00938 Initiation factor 3 signature. 30 43 - T 12-10-2018 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 JDM601_1820 a362f4705c8317405184834e7a87c823 177 SUPERFAMILY SSF55200 57 140 7.85E-29 T 12-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 JDM601_1647 6345557bb16f2ad11e2f47d6fd9995ac 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 85 96 3.3E-16 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_1647 6345557bb16f2ad11e2f47d6fd9995ac 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 3.3E-16 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_1647 6345557bb16f2ad11e2f47d6fd9995ac 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 3.3E-16 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_1647 6345557bb16f2ad11e2f47d6fd9995ac 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 3.3E-16 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_1647 6345557bb16f2ad11e2f47d6fd9995ac 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 211 231 3.3E-16 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_1647 6345557bb16f2ad11e2f47d6fd9995ac 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 85 96 9.5E-5 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_1647 6345557bb16f2ad11e2f47d6fd9995ac 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 9.5E-5 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_1647 6345557bb16f2ad11e2f47d6fd9995ac 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 9.5E-5 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_1647 6345557bb16f2ad11e2f47d6fd9995ac 249 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 247 3.2E-45 T 12-10-2018 JDM601_1647 6345557bb16f2ad11e2f47d6fd9995ac 249 SUPERFAMILY SSF51735 2 248 1.52E-54 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_1647 6345557bb16f2ad11e2f47d6fd9995ac 249 Gene3D G3DSA:3.40.50.720 1 249 3.2E-58 T 12-10-2018 JDM601_2109 e21c74c31b6cf513ed8be98be060b4a1 249 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 JDM601_2109 e21c74c31b6cf513ed8be98be060b4a1 249 Gene3D G3DSA:3.40.50.720 3 247 4.5E-38 T 12-10-2018 JDM601_2109 e21c74c31b6cf513ed8be98be060b4a1 249 Pfam PF00106 short chain dehydrogenase 9 194 3.8E-25 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2109 e21c74c31b6cf513ed8be98be060b4a1 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 1.5E-9 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2109 e21c74c31b6cf513ed8be98be060b4a1 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 1.5E-9 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2109 e21c74c31b6cf513ed8be98be060b4a1 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 1.5E-9 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2109 e21c74c31b6cf513ed8be98be060b4a1 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 1.5E-9 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2109 e21c74c31b6cf513ed8be98be060b4a1 249 SUPERFAMILY SSF51735 9 247 1.47E-38 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_3616 a1224bebb42507958f35ffffc48917c0 286 SUPERFAMILY SSF53474 14 284 6.83E-58 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_3616 a1224bebb42507958f35ffffc48917c0 286 Gene3D G3DSA:3.40.50.1820 7 286 2.4E-68 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_3616 a1224bebb42507958f35ffffc48917c0 286 Pfam PF12697 Alpha/beta hydrolase family 32 275 1.9E-20 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 JDM601_3616 a1224bebb42507958f35ffffc48917c0 286 PRINTS PR00111 Alpha/beta hydrolase fold signature 115 128 1.0E-19 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 JDM601_3616 a1224bebb42507958f35ffffc48917c0 286 PRINTS PR00111 Alpha/beta hydrolase fold signature 229 243 1.0E-19 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 JDM601_3616 a1224bebb42507958f35ffffc48917c0 286 PRINTS PR00111 Alpha/beta hydrolase fold signature 101 114 1.0E-19 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 JDM601_3616 a1224bebb42507958f35ffffc48917c0 286 PRINTS PR00111 Alpha/beta hydrolase fold signature 58 73 1.0E-19 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 JDM601_1216 a5d9c1dc36d96618629206c19eb57b1d 1228 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 1081 1227 1.1E-39 T 12-10-2018 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 JDM601_1216 a5d9c1dc36d96618629206c19eb57b1d 1228 Gene3D G3DSA:3.40.50.12470 834 1088 7.4E-112 T 12-10-2018 JDM601_1216 a5d9c1dc36d96618629206c19eb57b1d 1228 SUPERFAMILY SSF52518 866 1083 1.57E-42 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold JDM601_1216 a5d9c1dc36d96618629206c19eb57b1d 1228 SUPERFAMILY SSF52518 399 813 3.09E-83 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold JDM601_1216 a5d9c1dc36d96618629206c19eb57b1d 1228 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 357 1226 3.5E-298 T 12-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 JDM601_1216 a5d9c1dc36d96618629206c19eb57b1d 1228 PIRSF PIRSF000157 1 1228 0.0 T 12-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 JDM601_1216 a5d9c1dc36d96618629206c19eb57b1d 1228 SMART SM00861 877 1076 1.2E-45 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain JDM601_1216 a5d9c1dc36d96618629206c19eb57b1d 1228 SUPERFAMILY SSF52777 89 332 8.9E-52 T 12-10-2018 JDM601_1216 a5d9c1dc36d96618629206c19eb57b1d 1228 Pfam PF02779 Transketolase, pyrimidine binding domain 876 1076 1.9E-52 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain JDM601_1216 a5d9c1dc36d96618629206c19eb57b1d 1228 Gene3D G3DSA:3.40.50.970 445 812 1.0E-144 T 12-10-2018 JDM601_1216 a5d9c1dc36d96618629206c19eb57b1d 1228 Pfam PF00676 Dehydrogenase E1 component 486 810 1.1E-54 T 12-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 JDM601_1216 a5d9c1dc36d96618629206c19eb57b1d 1228 Gene3D G3DSA:1.10.287.1150 359 444 1.1E-30 T 12-10-2018 JDM601_1216 a5d9c1dc36d96618629206c19eb57b1d 1228 Gene3D G3DSA:3.40.50.11610 1089 1228 5.0E-43 T 12-10-2018 JDM601_1216 a5d9c1dc36d96618629206c19eb57b1d 1228 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 99 332 1.7E-52 T 12-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 JDM601_1216 a5d9c1dc36d96618629206c19eb57b1d 1228 Pfam PF16078 2-oxoglutarate dehydrogenase N-terminus 5 37 3.9E-11 T 12-10-2018 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 JDM601_1216 a5d9c1dc36d96618629206c19eb57b1d 1228 Gene3D G3DSA:3.30.559.10 81 340 3.1E-48 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 JDM601_2763 98245c2fda68e7864b07a81036ff5865 344 SUPERFAMILY SSF53254 35 246 4.58E-21 T 12-10-2018 IPR029033 Histidine phosphatase superfamily JDM601_2763 98245c2fda68e7864b07a81036ff5865 344 SMART SM00855 35 200 4.2E-8 T 12-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 JDM601_2763 98245c2fda68e7864b07a81036ff5865 344 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 38 137 2.0E-14 T 12-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 JDM601_2763 98245c2fda68e7864b07a81036ff5865 344 Gene3D G3DSA:3.40.50.1240 28 200 9.0E-17 T 12-10-2018 IPR029033 Histidine phosphatase superfamily JDM601_2763 98245c2fda68e7864b07a81036ff5865 344 PIRSF PIRSF000709 28 137 6.4E-4 T 12-10-2018 JDM601_1479 b681583ff5324a03cbd876e842ab72ff 721 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 541 705 8.8E-26 T 12-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 JDM601_1479 b681583ff5324a03cbd876e842ab72ff 721 Pfam PF00672 HAMP domain 456 504 4.5E-15 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JDM601_1479 b681583ff5324a03cbd876e842ab72ff 721 SMART SM00044 512 701 5.4E-16 T 12-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 JDM601_1479 b681583ff5324a03cbd876e842ab72ff 721 SUPERFAMILY SSF55073 534 709 1.41E-35 T 12-10-2018 IPR029787 Nucleotide cyclase JDM601_1479 b681583ff5324a03cbd876e842ab72ff 721 SUPERFAMILY SSF158472 456 505 9.02E-11 T 12-10-2018 JDM601_1479 b681583ff5324a03cbd876e842ab72ff 721 Gene3D G3DSA:3.30.70.1230 536 717 3.2E-34 T 12-10-2018 IPR029787 Nucleotide cyclase JDM601_1479 b681583ff5324a03cbd876e842ab72ff 721 SMART SM00304 456 508 7.4E-16 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JDM601_1479 b681583ff5324a03cbd876e842ab72ff 721 Gene3D G3DSA:1.20.1480.50 417 515 2.1E-18 T 12-10-2018 JDM601_1149 11cb66779fc6b2fb11bdfff041d73358 1240 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 62 80 - T 12-10-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 JDM601_1149 11cb66779fc6b2fb11bdfff041d73358 1240 Pfam PF01568 Molydopterin dinucleotide binding domain 1093 1202 1.8E-19 T 12-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 JDM601_1149 11cb66779fc6b2fb11bdfff041d73358 1240 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 780 797 - T 12-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 JDM601_1149 11cb66779fc6b2fb11bdfff041d73358 1240 SMART SM00926 57 119 8.3E-4 T 12-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 JDM601_1149 11cb66779fc6b2fb11bdfff041d73358 1240 Pfam PF00384 Molybdopterin oxidoreductase 122 835 1.1E-134 T 12-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 JDM601_1149 11cb66779fc6b2fb11bdfff041d73358 1240 SUPERFAMILY SSF53706 19 1071 0.0 T 12-10-2018 JDM601_1149 11cb66779fc6b2fb11bdfff041d73358 1240 SUPERFAMILY SSF50692 1093 1234 2.71E-40 T 12-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily JDM601_1149 11cb66779fc6b2fb11bdfff041d73358 1240 TIGRFAM TIGR01580 narG: nitrate reductase, alpha subunit 23 1237 0.0 T 12-10-2018 IPR006468 Nitrate reductase, alpha subunit GO:0008940|GO:0009325|GO:0042126|GO:0055114 KEGG: 00910+1.7.5.1|MetaCyc: PWY-6748 JDM601_1149 11cb66779fc6b2fb11bdfff041d73358 1240 Gene3D G3DSA:3.40.50.12440 58 1239 0.0 T 12-10-2018 JDM601_3895 c2e767be5ccca991469d564471df9c96 173 SUPERFAMILY SSF55083 1 146 1.44E-35 T 12-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 JDM601_3895 c2e767be5ccca991469d564471df9c96 173 Gene3D G3DSA:3.30.70.560 1 171 2.4E-37 T 12-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 JDM601_3895 c2e767be5ccca991469d564471df9c96 173 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 85 96 - T 12-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 JDM601_3895 c2e767be5ccca991469d564471df9c96 173 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 4 136 1.3E-33 T 12-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 JDM601_3895 c2e767be5ccca991469d564471df9c96 173 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 5 136 8.1E-29 T 12-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 JDM601_2657 5af520f62546e56ee3df4bb8caf01f20 233 Pfam PF00035 Double-stranded RNA binding motif 162 225 2.1E-17 T 12-10-2018 IPR014720 Double-stranded RNA-binding domain JDM601_2657 5af520f62546e56ee3df4bb8caf01f20 233 SUPERFAMILY SSF54768 116 227 9.43E-27 T 12-10-2018 JDM601_2657 5af520f62546e56ee3df4bb8caf01f20 233 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 16 226 1.5E-66 T 12-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 JDM601_2657 5af520f62546e56ee3df4bb8caf01f20 233 SMART SM00358 162 228 8.4E-23 T 12-10-2018 IPR014720 Double-stranded RNA-binding domain JDM601_2657 5af520f62546e56ee3df4bb8caf01f20 233 Gene3D G3DSA:1.10.1520.10 1 155 8.1E-47 T 12-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 JDM601_2657 5af520f62546e56ee3df4bb8caf01f20 233 Gene3D G3DSA:3.30.160.20 158 229 7.4E-22 T 12-10-2018 JDM601_2657 5af520f62546e56ee3df4bb8caf01f20 233 SMART SM00535 19 155 1.2E-48 T 12-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 JDM601_2657 5af520f62546e56ee3df4bb8caf01f20 233 SUPERFAMILY SSF69065 9 163 6.28E-42 T 12-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 JDM601_2657 5af520f62546e56ee3df4bb8caf01f20 233 Pfam PF14622 Ribonuclease-III-like 18 144 7.0E-34 T 12-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 JDM601_2657 5af520f62546e56ee3df4bb8caf01f20 233 ProSitePatterns PS00517 Ribonuclease III family signature. 41 49 - T 12-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 JDM601_2657 5af520f62546e56ee3df4bb8caf01f20 233 Hamap MF_00104 Ribonuclease 3 [rnc]. 8 224 28.325 T 12-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 JDM601_1628 48c7d302c7eba3183c3965bc522b1350 463 Gene3D G3DSA:3.30.465.40 21 229 5.7E-62 T 12-10-2018 JDM601_1628 48c7d302c7eba3183c3965bc522b1350 463 Gene3D G3DSA:1.10.45.10 423 462 3.8E-11 T 12-10-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 JDM601_1628 48c7d302c7eba3183c3965bc522b1350 463 SUPERFAMILY SSF55103 225 463 1.96E-49 T 12-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 JDM601_1628 48c7d302c7eba3183c3965bc522b1350 463 Pfam PF02913 FAD linked oxidases, C-terminal domain 223 460 1.1E-51 T 12-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 JDM601_1628 48c7d302c7eba3183c3965bc522b1350 463 Gene3D G3DSA:3.30.70.2740 345 422 8.2E-13 T 12-10-2018 JDM601_1628 48c7d302c7eba3183c3965bc522b1350 463 Pfam PF01565 FAD binding domain 47 185 6.1E-38 T 12-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 JDM601_1628 48c7d302c7eba3183c3965bc522b1350 463 SUPERFAMILY SSF56176 8 220 4.64E-59 T 12-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 JDM601_0858 53190e98aa6f45770b8023d5f3ea6b49 1426 Pfam PF00702 haloacid dehalogenase-like hydrolase 866 1141 1.6E-23 T 12-10-2018 JDM601_0858 53190e98aa6f45770b8023d5f3ea6b49 1426 SUPERFAMILY SSF81653 662 767 2.48E-24 T 12-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 JDM601_0858 53190e98aa6f45770b8023d5f3ea6b49 1426 Gene3D G3DSA:3.40.1110.10 953 1033 1.3E-63 T 12-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 JDM601_0858 53190e98aa6f45770b8023d5f3ea6b49 1426 Gene3D G3DSA:1.20.1110.10 602 865 2.7E-62 T 12-10-2018 JDM601_0858 53190e98aa6f45770b8023d5f3ea6b49 1426 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 1100 1116 1.9E-11 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 JDM601_0858 53190e98aa6f45770b8023d5f3ea6b49 1426 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 1160 1185 1.9E-11 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 JDM601_0858 53190e98aa6f45770b8023d5f3ea6b49 1426 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 1128 1144 1.9E-11 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 JDM601_0858 53190e98aa6f45770b8023d5f3ea6b49 1426 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 977 995 1.9E-11 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 JDM601_0858 53190e98aa6f45770b8023d5f3ea6b49 1426 SUPERFAMILY SSF81660 881 998 6.21E-6 T 12-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 JDM601_0858 53190e98aa6f45770b8023d5f3ea6b49 1426 SUPERFAMILY SSF81665 595 1360 4.32E-43 T 12-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 JDM601_0858 53190e98aa6f45770b8023d5f3ea6b49 1426 Gene3D G3DSA:3.40.50.1000 866 878 2.7E-62 T 12-10-2018 IPR023214 HAD superfamily JDM601_0858 53190e98aa6f45770b8023d5f3ea6b49 1426 Pfam PF00122 E1-E2 ATPase 659 847 8.2E-41 T 12-10-2018 JDM601_0858 53190e98aa6f45770b8023d5f3ea6b49 1426 SUPERFAMILY SSF56784 867 1232 3.59E-38 T 12-10-2018 IPR036412 HAD-like superfamily JDM601_0858 53190e98aa6f45770b8023d5f3ea6b49 1426 Gene3D G3DSA:1.20.1110.10 1167 1279 1.3E-63 T 12-10-2018 JDM601_0858 53190e98aa6f45770b8023d5f3ea6b49 1426 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 1152 1164 1.5E-26 T 12-10-2018 JDM601_0858 53190e98aa6f45770b8023d5f3ea6b49 1426 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 1026 1037 1.5E-26 T 12-10-2018 JDM601_0858 53190e98aa6f45770b8023d5f3ea6b49 1426 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 1048 1058 1.5E-26 T 12-10-2018 JDM601_0858 53190e98aa6f45770b8023d5f3ea6b49 1426 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 709 723 1.5E-26 T 12-10-2018 JDM601_0858 53190e98aa6f45770b8023d5f3ea6b49 1426 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 1128 1147 1.5E-26 T 12-10-2018 JDM601_0858 53190e98aa6f45770b8023d5f3ea6b49 1426 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 869 883 1.5E-26 T 12-10-2018 JDM601_0858 53190e98aa6f45770b8023d5f3ea6b49 1426 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 632 998 2.3E-30 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 JDM601_0858 53190e98aa6f45770b8023d5f3ea6b49 1426 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 1096 1210 4.1E-23 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 JDM601_0858 53190e98aa6f45770b8023d5f3ea6b49 1426 Gene3D G3DSA:2.70.150.10 595 772 2.7E-62 T 12-10-2018 JDM601_0858 53190e98aa6f45770b8023d5f3ea6b49 1426 Gene3D G3DSA:3.40.1110.10 879 890 2.7E-62 T 12-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 JDM601_0858 53190e98aa6f45770b8023d5f3ea6b49 1426 Pfam PF00689 Cation transporting ATPase, C-terminus 1213 1361 2.6E-11 T 12-10-2018 IPR006068 Cation-transporting P-type ATPase, C-terminal Reactome: R-HSA-936837 JDM601_0858 53190e98aa6f45770b8023d5f3ea6b49 1426 Gene3D G3DSA:3.40.50.1000 1034 1166 1.3E-63 T 12-10-2018 IPR023214 HAD superfamily JDM601_1625 98b5e65681b18ec204cff07ed4bde7e7 463 Pfam PF02720 Domain of unknown function (DUF222) 48 375 1.0E-69 T 12-10-2018 IPR003870 Domain of unknown function DUF222 JDM601_1326 4d4e801defd596c32659039a9070526e 393 ProSitePatterns PS00737 Thiolases signature 2. 339 355 - T 12-10-2018 IPR020613 Thiolase, conserved site GO:0016747 JDM601_1326 4d4e801defd596c32659039a9070526e 393 SUPERFAMILY SSF53901 5 270 1.4E-81 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 JDM601_1326 4d4e801defd596c32659039a9070526e 393 Pfam PF00108 Thiolase, N-terminal domain 5 262 5.7E-96 T 12-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 JDM601_1326 4d4e801defd596c32659039a9070526e 393 PIRSF PIRSF000429 1 393 5.9E-111 T 12-10-2018 IPR002155 Thiolase GO:0016747 JDM601_1326 4d4e801defd596c32659039a9070526e 393 Gene3D G3DSA:3.40.47.10 5 276 1.0E-134 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 JDM601_1326 4d4e801defd596c32659039a9070526e 393 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 390 2.2E-132 T 12-10-2018 IPR002155 Thiolase GO:0016747 JDM601_1326 4d4e801defd596c32659039a9070526e 393 Pfam PF02803 Thiolase, C-terminal domain 272 391 6.1E-41 T 12-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 JDM601_1326 4d4e801defd596c32659039a9070526e 393 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 84 102 - T 12-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 JDM601_1326 4d4e801defd596c32659039a9070526e 393 ProSitePatterns PS00099 Thiolases active site. 374 387 - T 12-10-2018 IPR020610 Thiolase, active site GO:0016747 JDM601_1326 4d4e801defd596c32659039a9070526e 393 Gene3D G3DSA:3.40.47.10 126 389 1.0E-134 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 JDM601_1326 4d4e801defd596c32659039a9070526e 393 SUPERFAMILY SSF53901 272 390 2.63E-33 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 JDM601_2424 03b4dfab420a187f762b4bf1191e23cd 349 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 25 34 - T 12-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 JDM601_2424 03b4dfab420a187f762b4bf1191e23cd 349 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 9 349 43.773 T 12-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 JDM601_2424 03b4dfab420a187f762b4bf1191e23cd 349 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 142 158 - T 12-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 JDM601_2424 03b4dfab420a187f762b4bf1191e23cd 349 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 12 348 1.6E-123 T 12-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 JDM601_2424 03b4dfab420a187f762b4bf1191e23cd 349 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 9 348 3.2E-121 T 12-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 JDM601_2424 03b4dfab420a187f762b4bf1191e23cd 349 Gene3D G3DSA:3.20.20.210 1 349 8.9E-140 T 12-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 JDM601_2424 03b4dfab420a187f762b4bf1191e23cd 349 SUPERFAMILY SSF51726 10 348 2.27E-97 T 12-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 JDM601_0186 dda95757729d13f7b3ed3035a79da0be 397 Gene3D G3DSA:3.40.50.1820 95 370 4.3E-58 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_0186 dda95757729d13f7b3ed3035a79da0be 397 ProSitePatterns PS00122 Carboxylesterases type-B serine active site. 214 229 - T 12-10-2018 IPR019826 Carboxylesterase type B, active site JDM601_0186 dda95757729d13f7b3ed3035a79da0be 397 Pfam PF07859 alpha/beta hydrolase fold 149 362 2.8E-22 T 12-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 JDM601_0186 dda95757729d13f7b3ed3035a79da0be 397 SUPERFAMILY SSF53474 88 368 1.51E-50 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_1870 ecc91c82e2e5a1f73a51b99602e7f38c 82 Gene3D G3DSA:1.10.443.10 1 58 3.6E-18 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 JDM601_1870 ecc91c82e2e5a1f73a51b99602e7f38c 82 SUPERFAMILY SSF56349 1 55 1.47E-16 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 JDM601_1870 ecc91c82e2e5a1f73a51b99602e7f38c 82 Pfam PF00589 Phage integrase family 2 44 5.1E-11 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 JDM601_1812 0d1c3818c199248bc5f5bc5690dea986 148 Pfam PF00582 Universal stress protein family 3 145 1.6E-25 T 12-10-2018 IPR006016 UspA JDM601_1812 0d1c3818c199248bc5f5bc5690dea986 148 SUPERFAMILY SSF52402 2 145 2.26E-30 T 12-10-2018 JDM601_1812 0d1c3818c199248bc5f5bc5690dea986 148 Gene3D G3DSA:3.40.50.620 1 148 3.3E-48 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JDM601_1812 0d1c3818c199248bc5f5bc5690dea986 148 PRINTS PR01438 Universal stress protein signature 123 145 5.2E-17 T 12-10-2018 IPR006015 Universal stress protein A JDM601_1812 0d1c3818c199248bc5f5bc5690dea986 148 PRINTS PR01438 Universal stress protein signature 4 22 5.2E-17 T 12-10-2018 IPR006015 Universal stress protein A JDM601_1812 0d1c3818c199248bc5f5bc5690dea986 148 PRINTS PR01438 Universal stress protein signature 105 117 5.2E-17 T 12-10-2018 IPR006015 Universal stress protein A JDM601_0188 9efd14e892247093255447db6f9aa7f7 545 Gene3D G3DSA:3.30.300.310 446 545 3.2E-32 T 12-10-2018 JDM601_0188 9efd14e892247093255447db6f9aa7f7 545 Gene3D G3DSA:3.40.50.12780 43 445 4.9E-77 T 12-10-2018 JDM601_0188 9efd14e892247093255447db6f9aa7f7 545 SUPERFAMILY SSF56801 52 543 2.09E-118 T 12-10-2018 JDM601_0188 9efd14e892247093255447db6f9aa7f7 545 Pfam PF00501 AMP-binding enzyme 54 449 6.3E-65 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 JDM601_0188 9efd14e892247093255447db6f9aa7f7 545 ProSitePatterns PS00455 Putative AMP-binding domain signature. 204 215 - T 12-10-2018 IPR020845 AMP-binding, conserved site JDM601_0188 9efd14e892247093255447db6f9aa7f7 545 Pfam PF13193 AMP-binding enzyme C-terminal domain 458 533 3.6E-23 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain JDM601_4199 4ab4a1059b1bbae2e1d44fde1bc123c7 223 Gene3D G3DSA:1.20.120.450 3 149 1.1E-7 T 12-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes JDM601_4199 4ab4a1059b1bbae2e1d44fde1bc123c7 223 Pfam PF11716 Mycothiol maleylpyruvate isomerase N-terminal domain 7 97 2.2E-11 T 12-10-2018 IPR024344 Mycothiol-dependent maleylpyruvate isomerase, metal-binding domain GO:0046872 JDM601_4199 4ab4a1059b1bbae2e1d44fde1bc123c7 223 TIGRFAM TIGR03083 TIGR03083: uncharacterized Actinobacterial protein TIGR03083 6 183 5.5E-17 T 12-10-2018 IPR017517 Conserved hypothetical protein CHP03083, actinobacterial-type JDM601_4199 4ab4a1059b1bbae2e1d44fde1bc123c7 223 SUPERFAMILY SSF109854 4 122 4.35E-11 T 12-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes JDM601_1085 94b2d0c8449d7cbb80ec66d964973d44 1338 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 1092 1111 2.5E-27 T 12-10-2018 JDM601_1085 94b2d0c8449d7cbb80ec66d964973d44 1338 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 1012 1022 2.5E-27 T 12-10-2018 JDM601_1085 94b2d0c8449d7cbb80ec66d964973d44 1338 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 827 841 2.5E-27 T 12-10-2018 JDM601_1085 94b2d0c8449d7cbb80ec66d964973d44 1338 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 990 1001 2.5E-27 T 12-10-2018 JDM601_1085 94b2d0c8449d7cbb80ec66d964973d44 1338 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 1116 1128 2.5E-27 T 12-10-2018 JDM601_1085 94b2d0c8449d7cbb80ec66d964973d44 1338 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 667 681 2.5E-27 T 12-10-2018 JDM601_1085 94b2d0c8449d7cbb80ec66d964973d44 1338 Pfam PF00689 Cation transporting ATPase, C-terminus 1177 1326 2.6E-16 T 12-10-2018 IPR006068 Cation-transporting P-type ATPase, C-terminal Reactome: R-HSA-936837 JDM601_1085 94b2d0c8449d7cbb80ec66d964973d44 1338 SUPERFAMILY SSF81653 628 728 4.58E-23 T 12-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 JDM601_1085 94b2d0c8449d7cbb80ec66d964973d44 1338 Pfam PF00122 E1-E2 ATPase 621 806 1.4E-37 T 12-10-2018 JDM601_1085 94b2d0c8449d7cbb80ec66d964973d44 1338 Gene3D G3DSA:3.40.1110.10 912 997 5.0E-71 T 12-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 JDM601_1085 94b2d0c8449d7cbb80ec66d964973d44 1338 Gene3D G3DSA:3.40.1110.10 837 878 4.9E-61 T 12-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 JDM601_1085 94b2d0c8449d7cbb80ec66d964973d44 1338 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 1059 1173 7.6E-23 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 JDM601_1085 94b2d0c8449d7cbb80ec66d964973d44 1338 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 591 846 1.6E-28 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 JDM601_1085 94b2d0c8449d7cbb80ec66d964973d44 1338 SUPERFAMILY SSF81665 512 1324 9.02E-46 T 12-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 JDM601_1085 94b2d0c8449d7cbb80ec66d964973d44 1338 SUPERFAMILY SSF56784 825 1196 1.31E-41 T 12-10-2018 IPR036412 HAD-like superfamily JDM601_1085 94b2d0c8449d7cbb80ec66d964973d44 1338 Gene3D G3DSA:3.40.50.1000 998 1137 5.0E-71 T 12-10-2018 IPR023214 HAD superfamily JDM601_1085 94b2d0c8449d7cbb80ec66d964973d44 1338 Gene3D G3DSA:3.40.50.1000 824 836 4.9E-61 T 12-10-2018 IPR023214 HAD superfamily JDM601_1085 94b2d0c8449d7cbb80ec66d964973d44 1338 Gene3D G3DSA:1.20.1110.10 1138 1293 5.0E-71 T 12-10-2018 JDM601_1085 94b2d0c8449d7cbb80ec66d964973d44 1338 Gene3D G3DSA:2.70.150.10 553 730 4.9E-61 T 12-10-2018 JDM601_1085 94b2d0c8449d7cbb80ec66d964973d44 1338 PRINTS PR00121 Sodium/potassium-transporting ATPase signature 820 841 7.7E-5 T 12-10-2018 JDM601_1085 94b2d0c8449d7cbb80ec66d964973d44 1338 PRINTS PR00121 Sodium/potassium-transporting ATPase signature 1305 1325 7.7E-5 T 12-10-2018 JDM601_1085 94b2d0c8449d7cbb80ec66d964973d44 1338 Pfam PF00702 haloacid dehalogenase-like hydrolase 823 1105 1.4E-20 T 12-10-2018 JDM601_1085 94b2d0c8449d7cbb80ec66d964973d44 1338 Gene3D G3DSA:1.20.1110.10 555 823 4.9E-61 T 12-10-2018 JDM601_2369 4b206c911e3777c64287913590cbbd2f 291 SUPERFAMILY SSF50891 125 289 2.78E-33 T 12-10-2018 IPR029000 Cyclophilin-like domain superfamily JDM601_2369 4b206c911e3777c64287913590cbbd2f 291 Gene3D G3DSA:2.40.100.10 122 290 5.9E-39 T 12-10-2018 IPR029000 Cyclophilin-like domain superfamily JDM601_2369 4b206c911e3777c64287913590cbbd2f 291 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 126 289 3.2E-24 T 12-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 JDM601_2369 4b206c911e3777c64287913590cbbd2f 291 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 219 234 7.2E-6 T 12-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 JDM601_2369 4b206c911e3777c64287913590cbbd2f 291 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 139 154 7.2E-6 T 12-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 JDM601_2588 45ef4f4ec6644fcc86ebc543876a9326 390 SUPERFAMILY SSF51717 46 219 1.26E-9 T 12-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 JDM601_2588 45ef4f4ec6644fcc86ebc543876a9326 390 Gene3D G3DSA:3.30.413.10 272 372 1.7E-36 T 12-10-2018 JDM601_2588 45ef4f4ec6644fcc86ebc543876a9326 390 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 16 367 33.376 T 12-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 JDM601_2588 45ef4f4ec6644fcc86ebc543876a9326 390 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 18 360 2.6E-129 T 12-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 JDM601_2588 45ef4f4ec6644fcc86ebc543876a9326 390 Pfam PF04551 GcpE protein 21 361 8.6E-132 T 12-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 JDM601_2588 45ef4f4ec6644fcc86ebc543876a9326 390 SUPERFAMILY SSF56014 276 359 1.22E-12 T 12-10-2018 JDM601_2588 45ef4f4ec6644fcc86ebc543876a9326 390 PIRSF PIRSF004640 11 371 1.1E-143 T 12-10-2018 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 JDM601_2588 45ef4f4ec6644fcc86ebc543876a9326 390 Gene3D G3DSA:3.20.20.20 10 271 2.5E-103 T 12-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 JDM601_1220 2b1366c5b7486317eb84926e05dcc812 547 Pfam PF00270 DEAD/DEAH box helicase 15 178 2.6E-48 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 JDM601_1220 2b1366c5b7486317eb84926e05dcc812 547 SUPERFAMILY SSF52540 59 345 4.27E-74 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_1220 2b1366c5b7486317eb84926e05dcc812 547 Gene3D G3DSA:3.40.50.300 198 415 3.8E-52 T 12-10-2018 JDM601_1220 2b1366c5b7486317eb84926e05dcc812 547 Gene3D G3DSA:3.40.50.300 1 196 4.0E-69 T 12-10-2018 JDM601_1220 2b1366c5b7486317eb84926e05dcc812 547 Gene3D G3DSA:3.30.70.330 456 528 1.3E-12 T 12-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily JDM601_1220 2b1366c5b7486317eb84926e05dcc812 547 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 138 146 - T 12-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site JDM601_1220 2b1366c5b7486317eb84926e05dcc812 547 SMART SM00487 9 207 8.3E-63 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain JDM601_1220 2b1366c5b7486317eb84926e05dcc812 547 Hamap MF_00964 ATP-dependent RNA helicase DeaD [deaD]. 1 527 42.466 T 12-10-2018 IPR028618 ATP-dependent RNA helicase DeaD GO:0000027|GO:0004004|GO:0070417 JDM601_1220 2b1366c5b7486317eb84926e05dcc812 547 Pfam PF00271 Helicase conserved C-terminal domain 216 324 8.8E-28 T 12-10-2018 IPR001650 Helicase, C-terminal JDM601_1220 2b1366c5b7486317eb84926e05dcc812 547 SMART SM00490 243 324 5.4E-32 T 12-10-2018 IPR001650 Helicase, C-terminal JDM601_1220 2b1366c5b7486317eb84926e05dcc812 547 Pfam PF03880 DbpA RNA binding domain 455 525 4.4E-21 T 12-10-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain JDM601_1385 53b7d0edd77bfc62fbcf7ffc857491e2 448 Pfam PF07687 Peptidase dimerisation domain 191 343 6.6E-18 T 12-10-2018 IPR011650 Peptidase M20, dimerisation domain JDM601_1385 53b7d0edd77bfc62fbcf7ffc857491e2 448 SUPERFAMILY SSF53187 2 443 5.19E-59 T 12-10-2018 JDM601_1385 53b7d0edd77bfc62fbcf7ffc857491e2 448 Gene3D G3DSA:3.30.70.360 199 362 3.9E-125 T 12-10-2018 JDM601_1385 53b7d0edd77bfc62fbcf7ffc857491e2 448 Gene3D G3DSA:3.40.630.10 18 432 3.9E-125 T 12-10-2018 JDM601_1385 53b7d0edd77bfc62fbcf7ffc857491e2 448 Pfam PF01546 Peptidase family M20/M25/M40 82 440 4.7E-35 T 12-10-2018 IPR002933 Peptidase M20 GO:0016787 JDM601_3775 ed83f56576685261839499d67ce50cc6 175 Gene3D G3DSA:1.10.10.60 1 36 4.5E-7 T 12-10-2018 JDM601_3775 ed83f56576685261839499d67ce50cc6 175 SUPERFAMILY SSF48498 54 169 4.77E-13 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily JDM601_3775 ed83f56576685261839499d67ce50cc6 175 Gene3D G3DSA:1.10.357.10 37 170 1.0E-21 T 12-10-2018 JDM601_3775 ed83f56576685261839499d67ce50cc6 175 SUPERFAMILY SSF46689 2 44 1.23E-8 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JDM601_3775 ed83f56576685261839499d67ce50cc6 175 Pfam PF00440 Bacterial regulatory proteins, tetR family 3 40 2.1E-8 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_3775 ed83f56576685261839499d67ce50cc6 175 Pfam PF16859 Bacterial transcriptional repressor C-terminal 50 154 7.8E-12 T 12-10-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal JDM601_3878 aae8c4a0ab09f9eb06a60f723bbf5852 396 SUPERFAMILY SSF52540 2 217 4.87E-43 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_3878 aae8c4a0ab09f9eb06a60f723bbf5852 396 SMART SM00382 14 168 2.5E-6 T 12-10-2018 IPR003593 AAA+ ATPase domain JDM601_3878 aae8c4a0ab09f9eb06a60f723bbf5852 396 Gene3D G3DSA:3.30.230.10 249 379 4.0E-12 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup JDM601_3878 aae8c4a0ab09f9eb06a60f723bbf5852 396 Pfam PF13541 Subunit ChlI of Mg-chelatase 262 351 1.7E-7 T 12-10-2018 JDM601_3878 aae8c4a0ab09f9eb06a60f723bbf5852 396 TIGRFAM TIGR00416 sms: DNA repair protein RadA 2 371 1.3E-129 T 12-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 JDM601_3878 aae8c4a0ab09f9eb06a60f723bbf5852 396 Gene3D G3DSA:3.40.50.300 1 203 4.4E-36 T 12-10-2018 JDM601_3878 aae8c4a0ab09f9eb06a60f723bbf5852 396 SUPERFAMILY SSF54211 179 378 2.12E-30 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold JDM601_3878 aae8c4a0ab09f9eb06a60f723bbf5852 396 PRINTS PR01874 DNA repair protein radA signature 246 269 4.1E-69 T 12-10-2018 JDM601_3878 aae8c4a0ab09f9eb06a60f723bbf5852 396 PRINTS PR01874 DNA repair protein radA signature 137 165 4.1E-69 T 12-10-2018 JDM601_3878 aae8c4a0ab09f9eb06a60f723bbf5852 396 PRINTS PR01874 DNA repair protein radA signature 172 198 4.1E-69 T 12-10-2018 JDM601_3878 aae8c4a0ab09f9eb06a60f723bbf5852 396 PRINTS PR01874 DNA repair protein radA signature 48 65 4.1E-69 T 12-10-2018 JDM601_3878 aae8c4a0ab09f9eb06a60f723bbf5852 396 PRINTS PR01874 DNA repair protein radA signature 6 34 4.1E-69 T 12-10-2018 JDM601_3878 aae8c4a0ab09f9eb06a60f723bbf5852 396 PRINTS PR01874 DNA repair protein radA signature 98 122 4.1E-69 T 12-10-2018 JDM601_3878 aae8c4a0ab09f9eb06a60f723bbf5852 396 Pfam PF13481 AAA domain 8 146 3.6E-14 T 12-10-2018 JDM601_1532 9e8bb24191cb77c8ca5412082075de2d 527 SUPERFAMILY SSF56801 13 521 2.75E-78 T 12-10-2018 JDM601_1532 9e8bb24191cb77c8ca5412082075de2d 527 ProSitePatterns PS00455 Putative AMP-binding domain signature. 158 169 - T 12-10-2018 IPR020845 AMP-binding, conserved site JDM601_1532 9e8bb24191cb77c8ca5412082075de2d 527 Pfam PF00501 AMP-binding enzyme 18 428 2.1E-49 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 JDM601_1532 9e8bb24191cb77c8ca5412082075de2d 527 Gene3D G3DSA:3.40.50.12780 2 422 4.2E-82 T 12-10-2018 JDM601_1532 9e8bb24191cb77c8ca5412082075de2d 527 Gene3D G3DSA:3.30.300.30 423 526 9.2E-21 T 12-10-2018 JDM601_3533 b8f60691c59ed603e4a142c3a1a98078 660 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 136 148 - T 12-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 JDM601_3533 b8f60691c59ed603e4a142c3a1a98078 660 SMART SM00220 17 278 1.3E-59 T 12-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 JDM601_3533 b8f60691c59ed603e4a142c3a1a98078 660 SUPERFAMILY SSF101898 420 656 4.18E-48 T 12-10-2018 JDM601_3533 b8f60691c59ed603e4a142c3a1a98078 660 Gene3D G3DSA:2.120.10.30 399 660 1.7E-96 T 12-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like JDM601_3533 b8f60691c59ed603e4a142c3a1a98078 660 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 23 46 - T 12-10-2018 IPR017441 Protein kinase, ATP binding site GO:0005524 JDM601_3533 b8f60691c59ed603e4a142c3a1a98078 660 Gene3D G3DSA:3.30.200.20 7 96 9.5E-30 T 12-10-2018 JDM601_3533 b8f60691c59ed603e4a142c3a1a98078 660 SUPERFAMILY SSF56112 14 281 2.83E-68 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily JDM601_3533 b8f60691c59ed603e4a142c3a1a98078 660 Pfam PF00069 Protein kinase domain 19 226 1.6E-43 T 12-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 JDM601_3533 b8f60691c59ed603e4a142c3a1a98078 660 Pfam PF08450 SMP-30/Gluconolaconase/LRE-like region 468 657 4.8E-8 T 12-10-2018 IPR013658 SMP-30/Gluconolactonase/LRE-like region JDM601_3533 b8f60691c59ed603e4a142c3a1a98078 660 Gene3D G3DSA:1.10.510.10 98 292 2.2E-49 T 12-10-2018 JDM601_0113 e1257dbdda5a3a5f48c13bc714acc17b 250 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 29 209 6.0E-28 T 12-10-2018 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 JDM601_0113 e1257dbdda5a3a5f48c13bc714acc17b 250 SUPERFAMILY SSF51621 2 247 7.22E-56 T 12-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 JDM601_0113 e1257dbdda5a3a5f48c13bc714acc17b 250 Gene3D G3DSA:3.20.20.60 1 249 1.1E-59 T 12-10-2018 JDM601_1253 2dce2f0dbaca2653671c2159806f3468 382 SUPERFAMILY SSF56645 7 201 7.59E-29 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 JDM601_1253 2dce2f0dbaca2653671c2159806f3468 382 PIRSF PIRSF016578 1 382 9.5E-115 T 12-10-2018 JDM601_1253 2dce2f0dbaca2653671c2159806f3468 382 SUPERFAMILY SSF47203 225 358 7.23E-13 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 JDM601_1253 2dce2f0dbaca2653671c2159806f3468 382 Pfam PF08028 Acyl-CoA dehydrogenase, C-terminal domain 233 363 4.3E-28 T 12-10-2018 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain JDM601_1253 2dce2f0dbaca2653671c2159806f3468 382 Gene3D G3DSA:1.20.140.10 207 382 4.4E-38 T 12-10-2018 JDM601_1253 2dce2f0dbaca2653671c2159806f3468 382 Gene3D G3DSA:2.40.110.10 108 202 1.8E-30 T 12-10-2018 JDM601_1253 2dce2f0dbaca2653671c2159806f3468 382 Gene3D G3DSA:1.10.540.10 1 107 7.2E-30 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 JDM601_0358 1899a5d6566fa1e9326ca35cb42738fe 296 SUPERFAMILY SSF54427 188 294 1.55E-5 T 12-10-2018 IPR032710 NTF2-like domain superfamily JDM601_2853 2d183a0e4e6ea605e70fcdc54bc94dae 402 SUPERFAMILY SSF89796 6 402 2.88E-130 T 12-10-2018 IPR023606 CoA-transferase family III domain superfamily JDM601_2853 2d183a0e4e6ea605e70fcdc54bc94dae 402 Pfam PF02515 CoA-transferase family III 8 377 3.3E-122 T 12-10-2018 IPR003673 CoA-transferase family III GO:0003824 JDM601_2853 2d183a0e4e6ea605e70fcdc54bc94dae 402 Gene3D G3DSA:3.30.1540.10 235 327 4.1E-133 T 12-10-2018 JDM601_2853 2d183a0e4e6ea605e70fcdc54bc94dae 402 Gene3D G3DSA:3.40.50.10540 8 396 4.1E-133 T 12-10-2018 IPR023606 CoA-transferase family III domain superfamily JDM601_0825 a584ec932465a58be303552cd60a2a8e 590 Gene3D G3DSA:1.20.1560.10 7 337 1.1E-82 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JDM601_0825 a584ec932465a58be303552cd60a2a8e 590 ProSitePatterns PS00211 ABC transporters family signature. 487 501 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JDM601_0825 a584ec932465a58be303552cd60a2a8e 590 SMART SM00382 375 561 4.5E-18 T 12-10-2018 IPR003593 AAA+ ATPase domain JDM601_0825 a584ec932465a58be303552cd60a2a8e 590 Pfam PF00005 ABC transporter 367 515 1.0E-30 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JDM601_0825 a584ec932465a58be303552cd60a2a8e 590 Gene3D G3DSA:3.40.50.300 341 588 5.6E-86 T 12-10-2018 JDM601_0825 a584ec932465a58be303552cd60a2a8e 590 Pfam PF00664 ABC transporter transmembrane region 31 304 1.8E-40 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 JDM601_0825 a584ec932465a58be303552cd60a2a8e 590 SUPERFAMILY SSF52540 340 584 4.93E-82 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_0825 a584ec932465a58be303552cd60a2a8e 590 SUPERFAMILY SSF90123 18 337 7.85E-74 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JDM601_3314 479c7aacedd92a5da65aba75e60c6151 62 Gene3D G3DSA:3.30.1390.20 1 59 1.7E-24 T 12-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily JDM601_3314 479c7aacedd92a5da65aba75e60c6151 62 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 1 58 19.0 T 12-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JDM601_3314 479c7aacedd92a5da65aba75e60c6151 62 Pfam PF00327 Ribosomal protein L30p/L7e 4 54 5.4E-19 T 12-10-2018 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain JDM601_3314 479c7aacedd92a5da65aba75e60c6151 62 ProSitePatterns PS00634 Ribosomal protein L30 signature. 22 54 - T 12-10-2018 IPR018038 Ribosomal protein L30, conserved site JDM601_3314 479c7aacedd92a5da65aba75e60c6151 62 PIRSF PIRSF002211 1 60 8.8E-28 T 12-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JDM601_3314 479c7aacedd92a5da65aba75e60c6151 62 SUPERFAMILY SSF55129 1 58 6.67E-20 T 12-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily JDM601_3314 479c7aacedd92a5da65aba75e60c6151 62 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 4 57 7.5E-20 T 12-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JDM601_4086 3fdb7503d59da5ad6286ca03a9901faa 368 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 34 130 7.3E-18 T 12-10-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain JDM601_4086 3fdb7503d59da5ad6286ca03a9901faa 368 SMART SM00922 149 241 2.1E-20 T 12-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal JDM601_4086 3fdb7503d59da5ad6286ca03a9901faa 368 Pfam PF13378 Enolase C-terminal domain-like 153 359 9.9E-49 T 12-10-2018 IPR029065 Enolase C-terminal domain-like JDM601_4086 3fdb7503d59da5ad6286ca03a9901faa 368 SUPERFAMILY SSF51604 118 366 2.23E-58 T 12-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily JDM601_4086 3fdb7503d59da5ad6286ca03a9901faa 368 Gene3D G3DSA:3.30.390.10 2 127 8.5E-36 T 12-10-2018 IPR029017 Enolase-like, N-terminal JDM601_4086 3fdb7503d59da5ad6286ca03a9901faa 368 Gene3D G3DSA:3.20.20.120 128 367 1.3E-61 T 12-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily JDM601_4086 3fdb7503d59da5ad6286ca03a9901faa 368 SUPERFAMILY SSF54826 6 131 4.82E-31 T 12-10-2018 JDM601_2140 356b3055916aa8a08cda97058305ff4f 118 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 36 108 6.0E-33 T 12-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 JDM601_2140 356b3055916aa8a08cda97058305ff4f 118 Gene3D G3DSA:3.10.20.400 2 100 1.1E-37 T 12-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 JDM601_2140 356b3055916aa8a08cda97058305ff4f 118 Hamap MF_01021 Phosphoribosyl-AMP cyclohydrolase [hisI]. 10 113 30.306 T 12-10-2018 IPR026660 Phosphoribosyl-AMP cyclohydrolase GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 JDM601_2140 356b3055916aa8a08cda97058305ff4f 118 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 59 113 9.0E-23 T 12-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 JDM601_2140 356b3055916aa8a08cda97058305ff4f 118 SUPERFAMILY SSF141734 9 113 1.83E-43 T 12-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 JDM601_1674 b2dbb03ca57612fce3e586dbc7b4d750 358 Pfam PF05235 CHAD domain 14 68 3.4E-8 T 12-10-2018 IPR007899 CHAD domain JDM601_1674 b2dbb03ca57612fce3e586dbc7b4d750 358 Pfam PF05235 CHAD domain 133 306 4.3E-33 T 12-10-2018 IPR007899 CHAD domain JDM601_1674 b2dbb03ca57612fce3e586dbc7b4d750 358 SMART SM00880 13 339 4.4E-35 T 12-10-2018 IPR007899 CHAD domain JDM601_1674 b2dbb03ca57612fce3e586dbc7b4d750 358 Gene3D G3DSA:1.40.20.10 124 354 3.5E-34 T 12-10-2018 IPR038186 CHAD domain superfamily JDM601_1674 b2dbb03ca57612fce3e586dbc7b4d750 358 Gene3D G3DSA:1.40.20.10 2 61 1.2E-7 T 12-10-2018 IPR038186 CHAD domain superfamily JDM601_3575 05e93355f34a6929feeed972c47b6316 212 Gene3D G3DSA:3.60.15.10 1 187 1.7E-30 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like JDM601_3575 05e93355f34a6929feeed972c47b6316 212 SMART SM00849 6 177 1.4E-12 T 12-10-2018 IPR001279 Metallo-beta-lactamase JDM601_3575 05e93355f34a6929feeed972c47b6316 212 SUPERFAMILY SSF56281 1 181 7.47E-23 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like JDM601_3575 05e93355f34a6929feeed972c47b6316 212 Pfam PF13483 Beta-lactamase superfamily domain 2 177 1.0E-20 T 12-10-2018 JDM601_2338 889862d2f2ad50ddc1f560daca5898c3 263 TIGRFAM TIGR01809 Shik-DH-AROM: shikimate-5-dehydrogenase 1 259 1.6E-86 T 12-10-2018 IPR010110 Shikimate dehydrogenase, AroM-type GO:0004764|GO:0005737|GO:0055114 KEGG: 00400+1.1.1.25+4.2.1.10+2.7.1.71+2.5.1.19+4.2.3.4|MetaCyc: PWY-6163|MetaCyc: PWY-6164|MetaCyc: PWY-6416|MetaCyc: PWY-6707 JDM601_2338 889862d2f2ad50ddc1f560daca5898c3 263 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 1 83 6.4E-20 T 12-10-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 JDM601_2338 889862d2f2ad50ddc1f560daca5898c3 263 Gene3D G3DSA:3.40.50.10860 1 251 2.5E-83 T 12-10-2018 JDM601_2338 889862d2f2ad50ddc1f560daca5898c3 263 SUPERFAMILY SSF53223 1 95 6.33E-24 T 12-10-2018 JDM601_2338 889862d2f2ad50ddc1f560daca5898c3 263 Gene3D G3DSA:3.40.50.720 96 237 2.5E-83 T 12-10-2018 JDM601_2338 889862d2f2ad50ddc1f560daca5898c3 263 SUPERFAMILY SSF51735 113 258 1.14E-24 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_2513 79e2018112b0bee22caf2168573fa591 342 Gene3D G3DSA:3.90.1200.10 110 335 8.0E-63 T 12-10-2018 JDM601_2513 79e2018112b0bee22caf2168573fa591 342 Gene3D G3DSA:3.30.200.20 8 107 2.8E-24 T 12-10-2018 JDM601_2513 79e2018112b0bee22caf2168573fa591 342 SUPERFAMILY SSF56112 8 315 1.31E-56 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily JDM601_2513 79e2018112b0bee22caf2168573fa591 342 Pfam PF01636 Phosphotransferase enzyme family 31 262 3.6E-45 T 12-10-2018 IPR002575 Aminoglycoside phosphotransferase JDM601_2956 a0e3eb60fcfb5af55dcc66964f61f4f9 249 Gene3D G3DSA:3.90.1680.10 1 245 4.6E-69 T 12-10-2018 IPR036590 SOS response associated peptidase-like JDM601_2956 a0e3eb60fcfb5af55dcc66964f61f4f9 249 Pfam PF02586 SOS response associated peptidase (SRAP) 1 228 1.2E-60 T 12-10-2018 IPR003738 SOS response associated peptidase (SRAP) JDM601_2956 a0e3eb60fcfb5af55dcc66964f61f4f9 249 SUPERFAMILY SSF143081 2 234 8.89E-63 T 12-10-2018 IPR036590 SOS response associated peptidase-like JDM601_1688 41c310dea4182ce38dc9b2253081a6c6 587 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 351 578 3.9E-70 T 12-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 JDM601_1688 41c310dea4182ce38dc9b2253081a6c6 587 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 160 189 - T 12-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 JDM601_1688 41c310dea4182ce38dc9b2253081a6c6 587 SUPERFAMILY SSF47005 276 319 9.68E-13 T 12-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 JDM601_1688 41c310dea4182ce38dc9b2253081a6c6 587 SUPERFAMILY SSF52777 338 578 1.11E-72 T 12-10-2018 JDM601_1688 41c310dea4182ce38dc9b2253081a6c6 587 Gene3D G3DSA:2.40.50.100 131 231 4.6E-25 T 12-10-2018 JDM601_1688 41c310dea4182ce38dc9b2253081a6c6 587 Gene3D G3DSA:2.40.50.100 2 102 2.5E-28 T 12-10-2018 JDM601_1688 41c310dea4182ce38dc9b2253081a6c6 587 SUPERFAMILY SSF51230 1 96 3.93E-28 T 12-10-2018 IPR011053 Single hybrid motif JDM601_1688 41c310dea4182ce38dc9b2253081a6c6 587 Pfam PF02817 e3 binding domain 281 315 4.5E-15 T 12-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 JDM601_1688 41c310dea4182ce38dc9b2253081a6c6 587 Pfam PF00364 Biotin-requiring enzyme 138 209 1.6E-20 T 12-10-2018 IPR000089 Biotin/lipoyl attachment JDM601_1688 41c310dea4182ce38dc9b2253081a6c6 587 Pfam PF00364 Biotin-requiring enzyme 5 76 1.4E-22 T 12-10-2018 IPR000089 Biotin/lipoyl attachment JDM601_1688 41c310dea4182ce38dc9b2253081a6c6 587 TIGRFAM TIGR02927 SucB_Actino: 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase 1 587 3.0E-280 T 12-10-2018 IPR014276 2-oxoglutarate dehydrogenase, E2 component KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00620+2.3.1.12 JDM601_1688 41c310dea4182ce38dc9b2253081a6c6 587 Gene3D G3DSA:3.30.559.10 333 584 5.4E-79 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 JDM601_1688 41c310dea4182ce38dc9b2253081a6c6 587 Gene3D G3DSA:4.10.320.10 275 320 1.4E-16 T 12-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 JDM601_1688 41c310dea4182ce38dc9b2253081a6c6 587 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 12-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 JDM601_1688 41c310dea4182ce38dc9b2253081a6c6 587 SUPERFAMILY SSF51230 137 228 4.84E-26 T 12-10-2018 IPR011053 Single hybrid motif JDM601_0378 a62a434397e5e5e9220c93a673d8c7fe 131 Pfam PF16525 Haemophore, haem-binding 37 113 2.3E-27 T 12-10-2018 IPR032407 Haemophore, haem-binding GO:0020037 JDM601_0378 a62a434397e5e5e9220c93a673d8c7fe 131 Gene3D G3DSA:1.20.20.20 34 129 4.6E-23 T 12-10-2018 IPR038378 Haemophore, haem-binding domain superfamily JDM601_0378 a62a434397e5e5e9220c93a673d8c7fe 131 TIGRFAM TIGR04529 MTB_hemophore: hemophore-related protein, Rv0203/Rv1174c family 39 114 5.3E-23 T 12-10-2018 IPR032407 Haemophore, haem-binding GO:0020037 JDM601_0799 efa1c00ead5445482e64c09266895007 646 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 165 261 5.4E-20 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 JDM601_0799 efa1c00ead5445482e64c09266895007 646 SUPERFAMILY SSF47203 275 434 9.99E-39 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 JDM601_0799 efa1c00ead5445482e64c09266895007 646 Gene3D G3DSA:1.20.140.10 488 601 2.2E-15 T 12-10-2018 JDM601_0799 efa1c00ead5445482e64c09266895007 646 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 56 161 1.1E-18 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 JDM601_0799 efa1c00ead5445482e64c09266895007 646 Gene3D G3DSA:2.40.110.10 164 274 9.9E-128 T 12-10-2018 JDM601_0799 efa1c00ead5445482e64c09266895007 646 Gene3D G3DSA:1.10.540.10 50 163 9.9E-128 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 JDM601_0799 efa1c00ead5445482e64c09266895007 646 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 275 433 1.6E-33 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 JDM601_0799 efa1c00ead5445482e64c09266895007 646 Gene3D G3DSA:1.20.140.10 275 431 9.9E-128 T 12-10-2018 JDM601_0799 efa1c00ead5445482e64c09266895007 646 SUPERFAMILY SSF56645 29 285 5.76E-58 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 JDM601_3369 5679a22e6fa8902806f7715c1b5c1bad 141 Pfam PF01796 DUF35 OB-fold domain, acyl-CoA-associated 51 117 2.4E-13 T 12-10-2018 IPR002878 Domain of unknown function DUF35, OB-fold, C-terminal JDM601_3369 5679a22e6fa8902806f7715c1b5c1bad 141 Pfam PF12172 Rubredoxin-like zinc ribbon domain (DUF35_N) 15 46 3.5E-9 T 12-10-2018 IPR022002 Domain of unknown function DUF35, rubredoxin-like zinc ribbon domain, N-terminal JDM601_3369 5679a22e6fa8902806f7715c1b5c1bad 141 SUPERFAMILY SSF50249 17 123 1.88E-22 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold JDM601_0878 284fe3efcd72262e13b2e19ed585ca83 201 SUPERFAMILY SSF46689 23 77 3.4E-13 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JDM601_0878 284fe3efcd72262e13b2e19ed585ca83 201 Pfam PF16859 Bacterial transcriptional repressor C-terminal 81 191 8.9E-27 T 12-10-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal JDM601_0878 284fe3efcd72262e13b2e19ed585ca83 201 Gene3D G3DSA:1.10.10.60 15 62 8.4E-16 T 12-10-2018 JDM601_0878 284fe3efcd72262e13b2e19ed585ca83 201 Pfam PF00440 Bacterial regulatory proteins, tetR family 24 70 9.5E-15 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_0878 284fe3efcd72262e13b2e19ed585ca83 201 Gene3D G3DSA:1.10.357.10 63 199 9.6E-29 T 12-10-2018 JDM601_0878 284fe3efcd72262e13b2e19ed585ca83 201 SUPERFAMILY SSF48498 85 194 6.16E-20 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily JDM601_0878 284fe3efcd72262e13b2e19ed585ca83 201 ProSitePatterns PS01081 TetR-type HTH domain signature. 36 67 - T 12-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site JDM601_0878 284fe3efcd72262e13b2e19ed585ca83 201 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 45 68 4.0E-6 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_0878 284fe3efcd72262e13b2e19ed585ca83 201 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 24 37 4.0E-6 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_0559 051e5cb51ca19a568c847db9d0ecce75 341 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 9 163 1.2E-45 T 12-10-2018 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 JDM601_0559 051e5cb51ca19a568c847db9d0ecce75 341 SUPERFAMILY SSF48179 183 335 1.41E-46 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 JDM601_0559 051e5cb51ca19a568c847db9d0ecce75 341 Gene3D G3DSA:1.10.1040.10 193 337 1.9E-46 T 12-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 JDM601_0559 051e5cb51ca19a568c847db9d0ecce75 341 Gene3D G3DSA:3.40.50.720 2 191 1.8E-55 T 12-10-2018 JDM601_0559 051e5cb51ca19a568c847db9d0ecce75 341 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 184 324 1.8E-48 T 12-10-2018 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 JDM601_0559 051e5cb51ca19a568c847db9d0ecce75 341 PIRSF PIRSF000114 2 336 2.1E-101 T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 JDM601_0559 051e5cb51ca19a568c847db9d0ecce75 341 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 8 326 34.676 T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 JDM601_0559 051e5cb51ca19a568c847db9d0ecce75 341 SUPERFAMILY SSF51735 8 184 5.71E-41 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_0559 051e5cb51ca19a568c847db9d0ecce75 341 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 192 213 - T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 JDM601_0559 051e5cb51ca19a568c847db9d0ecce75 341 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 242 259 3.7E-43 T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 JDM601_0559 051e5cb51ca19a568c847db9d0ecce75 341 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 62 89 3.7E-43 T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 JDM601_0559 051e5cb51ca19a568c847db9d0ecce75 341 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 177 201 3.7E-43 T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 JDM601_0559 051e5cb51ca19a568c847db9d0ecce75 341 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 137 157 3.7E-43 T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 JDM601_0559 051e5cb51ca19a568c847db9d0ecce75 341 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 12 29 3.7E-43 T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 JDM601_0559 051e5cb51ca19a568c847db9d0ecce75 341 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 202 226 3.7E-43 T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 JDM601_1476 3b5466d74ae9d288ef3594482c81c6a0 684 PIRSF PIRSF006630 13 674 7.5E-174 T 12-10-2018 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 JDM601_1476 3b5466d74ae9d288ef3594482c81c6a0 684 Pfam PF02540 NAD synthase 351 524 1.2E-22 T 12-10-2018 IPR022310 NAD/GMP synthase JDM601_1476 3b5466d74ae9d288ef3594482c81c6a0 684 Gene3D G3DSA:3.60.110.10 4 326 5.9E-86 T 12-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily JDM601_1476 3b5466d74ae9d288ef3594482c81c6a0 684 SUPERFAMILY SSF52402 328 652 5.35E-62 T 12-10-2018 JDM601_1476 3b5466d74ae9d288ef3594482c81c6a0 684 SUPERFAMILY SSF56317 15 299 4.71E-44 T 12-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily JDM601_1476 3b5466d74ae9d288ef3594482c81c6a0 684 Hamap MF_02090 Glutamine-dependent NAD(+) synthetase [nadE]. 16 672 27.916 T 12-10-2018 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 JDM601_1476 3b5466d74ae9d288ef3594482c81c6a0 684 Gene3D G3DSA:1.10.10.1140 562 684 1.1E-51 T 12-10-2018 JDM601_1476 3b5466d74ae9d288ef3594482c81c6a0 684 Gene3D G3DSA:3.40.50.620 327 547 7.4E-65 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JDM601_1476 3b5466d74ae9d288ef3594482c81c6a0 684 Pfam PF00795 Carbon-nitrogen hydrolase 17 284 1.3E-14 T 12-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 JDM601_2510 9878fcb95d23066cfd50998b3131d9a6 266 PRINTS PR00108 Thymidylate synthase family signature 118 137 1.1E-46 T 12-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 JDM601_2510 9878fcb95d23066cfd50998b3131d9a6 266 PRINTS PR00108 Thymidylate synthase family signature 45 66 1.1E-46 T 12-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 JDM601_2510 9878fcb95d23066cfd50998b3131d9a6 266 PRINTS PR00108 Thymidylate synthase family signature 144 159 1.1E-46 T 12-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 JDM601_2510 9878fcb95d23066cfd50998b3131d9a6 266 PRINTS PR00108 Thymidylate synthase family signature 200 217 1.1E-46 T 12-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 JDM601_2510 9878fcb95d23066cfd50998b3131d9a6 266 PRINTS PR00108 Thymidylate synthase family signature 162 188 1.1E-46 T 12-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 JDM601_2510 9878fcb95d23066cfd50998b3131d9a6 266 Gene3D G3DSA:3.30.572.10 4 266 5.5E-124 T 12-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 JDM601_2510 9878fcb95d23066cfd50998b3131d9a6 266 SUPERFAMILY SSF55831 5 266 7.33E-122 T 12-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 JDM601_2510 9878fcb95d23066cfd50998b3131d9a6 266 Hamap MF_00008 Thymidylate synthase [thyA]. 4 266 38.575 T 12-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 JDM601_2510 9878fcb95d23066cfd50998b3131d9a6 266 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 7 88 2.6E-37 T 12-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 JDM601_2510 9878fcb95d23066cfd50998b3131d9a6 266 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 88 266 3.0E-89 T 12-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 JDM601_2510 9878fcb95d23066cfd50998b3131d9a6 266 ProSitePatterns PS00091 Thymidylate synthase active site. 129 157 - T 12-10-2018 IPR020940 Thymidylate synthase, active site GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 JDM601_2510 9878fcb95d23066cfd50998b3131d9a6 266 Pfam PF00303 Thymidylate synthase 6 266 1.6E-117 T 12-10-2018 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 JDM601_3846 29907619da324018499146d7477cd8c5 378 Gene3D G3DSA:3.20.20.70 1 372 5.4E-88 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JDM601_3846 29907619da324018499146d7477cd8c5 378 Pfam PF03060 Nitronate monooxygenase 7 363 2.0E-47 T 12-10-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 JDM601_3846 29907619da324018499146d7477cd8c5 378 SUPERFAMILY SSF51412 2 369 6.56E-48 T 12-10-2018 JDM601_1444 952552c6295e0aa74d13b274dd982e0e 267 Pfam PF06827 Zinc finger found in FPG and IleRS 239 266 5.7E-6 T 12-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 JDM601_1444 952552c6295e0aa74d13b274dd982e0e 267 ProSitePatterns PS01242 Zinc finger FPG-type signature. 242 266 - T 12-10-2018 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 JDM601_1444 952552c6295e0aa74d13b274dd982e0e 267 SUPERFAMILY SSF46946 124 208 1.62E-23 T 12-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 JDM601_1444 952552c6295e0aa74d13b274dd982e0e 267 SMART SM00898 2 111 1.1E-11 T 12-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 JDM601_1444 952552c6295e0aa74d13b274dd982e0e 267 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 125 210 7.6E-22 T 12-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 JDM601_1444 952552c6295e0aa74d13b274dd982e0e 267 SMART SM01232 125 217 1.2E-32 T 12-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 JDM601_1444 952552c6295e0aa74d13b274dd982e0e 267 Gene3D G3DSA:1.10.8.50 127 267 1.9E-39 T 12-10-2018 JDM601_1444 952552c6295e0aa74d13b274dd982e0e 267 SUPERFAMILY SSF81624 2 126 1.38E-19 T 12-10-2018 IPR035937 MutM-like, N-terminal JDM601_1444 952552c6295e0aa74d13b274dd982e0e 267 Gene3D G3DSA:3.20.190.10 2 105 1.2E-7 T 12-10-2018 IPR035937 MutM-like, N-terminal JDM601_1444 952552c6295e0aa74d13b274dd982e0e 267 SUPERFAMILY SSF57716 231 266 3.57E-11 T 12-10-2018 JDM601_1286 a757b717fa8bd053dbf7ba03b78e1495 363 Gene3D G3DSA:1.20.1260.20 2 175 4.0E-67 T 12-10-2018 IPR038332 PPE superfamily JDM601_1286 a757b717fa8bd053dbf7ba03b78e1495 363 SUPERFAMILY SSF140459 3 174 5.23E-63 T 12-10-2018 JDM601_1286 a757b717fa8bd053dbf7ba03b78e1495 363 Pfam PF12484 Polymorphic PE/PPE proteins C terminal 274 359 3.5E-13 T 12-10-2018 IPR022171 PPE family, C-terminal JDM601_1286 a757b717fa8bd053dbf7ba03b78e1495 363 Pfam PF00823 PPE family 6 163 1.1E-62 T 12-10-2018 IPR000030 PPE family JDM601_3841 04d8d743a7e8429600bb94f4dec15602 275 SUPERFAMILY SSF53474 18 271 5.9E-39 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_3841 04d8d743a7e8429600bb94f4dec15602 275 Gene3D G3DSA:3.40.50.1820 25 271 2.1E-38 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_3841 04d8d743a7e8429600bb94f4dec15602 275 Pfam PF12146 Serine aminopeptidase, S33 32 258 5.0E-22 T 12-10-2018 IPR022742 Serine aminopeptidase, S33 JDM601_3841 04d8d743a7e8429600bb94f4dec15602 275 PRINTS PR00111 Alpha/beta hydrolase fold signature 56 71 1.5E-5 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 JDM601_3841 04d8d743a7e8429600bb94f4dec15602 275 PRINTS PR00111 Alpha/beta hydrolase fold signature 217 231 1.5E-5 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 JDM601_3841 04d8d743a7e8429600bb94f4dec15602 275 PRINTS PR00111 Alpha/beta hydrolase fold signature 101 114 1.5E-5 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 JDM601_0546 5caad7c90a3afc1eb326f0dbf1b6033c 61 Gene3D G3DSA:3.20.20.30 1 53 8.5E-6 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 JDM601_0546 5caad7c90a3afc1eb326f0dbf1b6033c 61 SUPERFAMILY SSF51679 1 50 2.75E-6 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 JDM601_0593 cf806dcb1a290109cdab1b7033148655 259 ProSitePatterns PS00135 Serine proteases, trypsin family, serine active site. 193 204 - T 12-10-2018 IPR033116 Serine proteases, trypsin family, serine active site JDM601_0593 cf806dcb1a290109cdab1b7033148655 259 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 85 90 - T 12-10-2018 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 JDM601_0593 cf806dcb1a290109cdab1b7033148655 259 Gene3D G3DSA:2.40.10.10 65 252 9.9E-17 T 12-10-2018 JDM601_0593 cf806dcb1a290109cdab1b7033148655 259 Gene3D G3DSA:2.40.10.10 145 242 9.9E-17 T 12-10-2018 JDM601_0593 cf806dcb1a290109cdab1b7033148655 259 SUPERFAMILY SSF50494 64 241 1.02E-18 T 12-10-2018 IPR009003 Peptidase S1, PA clan JDM601_1206 2679cf0c2634a54feb8d4bd2ecf47821 471 Pfam PF01547 Bacterial extracellular solute-binding protein 82 382 2.0E-28 T 12-10-2018 IPR006059 Bacterial extracellular solute-binding protein JDM601_1206 2679cf0c2634a54feb8d4bd2ecf47821 471 SUPERFAMILY SSF53850 40 442 1.86E-59 T 12-10-2018 JDM601_1036 3419d2b8cd494a277fc8126af2b15903 179 Pfam PF05305 Protein of unknown function (DUF732) 9 97 4.5E-9 T 12-10-2018 IPR007969 Domain of unknown function DUF732 JDM601_1036 3419d2b8cd494a277fc8126af2b15903 179 PRINTS PR01217 Proline rich extensin signature 95 107 4.8E-12 T 12-10-2018 JDM601_1036 3419d2b8cd494a277fc8126af2b15903 179 PRINTS PR01217 Proline rich extensin signature 142 163 4.8E-12 T 12-10-2018 JDM601_1036 3419d2b8cd494a277fc8126af2b15903 179 PRINTS PR01217 Proline rich extensin signature 110 126 4.8E-12 T 12-10-2018 JDM601_1036 3419d2b8cd494a277fc8126af2b15903 179 PRINTS PR01217 Proline rich extensin signature 130 142 4.8E-12 T 12-10-2018 JDM601_0228 8ef9c693d24dbdcb6617b5e18c376a32 321 Pfam PF01965 DJ-1/PfpI family 4 179 5.8E-21 T 12-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 JDM601_0228 8ef9c693d24dbdcb6617b5e18c376a32 321 SMART SM00342 234 317 9.9E-26 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 JDM601_0228 8ef9c693d24dbdcb6617b5e18c376a32 321 Gene3D G3DSA:1.10.10.60 213 269 8.4E-11 T 12-10-2018 JDM601_0228 8ef9c693d24dbdcb6617b5e18c376a32 321 SUPERFAMILY SSF46689 270 320 1.16E-9 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JDM601_0228 8ef9c693d24dbdcb6617b5e18c376a32 321 Gene3D G3DSA:1.10.10.60 270 320 3.6E-11 T 12-10-2018 JDM601_0228 8ef9c693d24dbdcb6617b5e18c376a32 321 Gene3D G3DSA:3.40.50.880 2 207 1.3E-60 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like JDM601_0228 8ef9c693d24dbdcb6617b5e18c376a32 321 Pfam PF12833 Helix-turn-helix domain 240 318 3.3E-22 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 JDM601_0228 8ef9c693d24dbdcb6617b5e18c376a32 321 SUPERFAMILY SSF52317 3 199 1.36E-46 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like JDM601_0228 8ef9c693d24dbdcb6617b5e18c376a32 321 SUPERFAMILY SSF46689 220 267 2.51E-8 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JDM601_0158 360567ee7a103e1f9f42a829bc8100ba 97 Pfam PF02583 Metal-sensitive transcriptional repressor 12 92 2.9E-30 T 12-10-2018 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 JDM601_0158 360567ee7a103e1f9f42a829bc8100ba 97 Gene3D G3DSA:1.20.58.1000 8 97 2.3E-35 T 12-10-2018 IPR038390 Metal-sensitive transcriptional repressor superfamily JDM601_3379 80d0a705f4863a3435775bc0128c3526 306 Pfam PF09339 IclR helix-turn-helix domain 20 69 5.7E-7 T 12-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 JDM601_3379 80d0a705f4863a3435775bc0128c3526 306 SUPERFAMILY SSF46785 19 87 2.59E-10 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JDM601_3379 80d0a705f4863a3435775bc0128c3526 306 SUPERFAMILY SSF55781 91 291 3.38E-14 T 12-10-2018 JDM601_3379 80d0a705f4863a3435775bc0128c3526 306 Gene3D G3DSA:1.10.10.10 14 84 2.5E-15 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JDM601_3379 80d0a705f4863a3435775bc0128c3526 306 SMART SM00346 14 102 0.0082 T 12-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 JDM601_2012 1dc3fee16fd8cce0a49bd2ac90ecaf62 146 Pfam PF05423 Mycobacterium membrane protein 9 146 2.7E-42 T 12-10-2018 IPR008693 Transport accessory protein MmpS JDM601_2012 1dc3fee16fd8cce0a49bd2ac90ecaf62 146 Gene3D G3DSA:2.60.40.2880 57 146 2.6E-33 T 12-10-2018 IPR038468 Transport accessory protein MmpS, soluble domain superfamily JDM601_3659 4a59603146e7c6e8bb6c1916c2ddfc05 343 Pfam PF00296 Luciferase-like monooxygenase 14 324 2.2E-69 T 12-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 JDM601_3659 4a59603146e7c6e8bb6c1916c2ddfc05 343 SUPERFAMILY SSF51679 1 338 1.12E-64 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 JDM601_3659 4a59603146e7c6e8bb6c1916c2ddfc05 343 TIGRFAM TIGR03559 F420_Rv3520c: probable F420-dependent oxidoreductase, Rv3520c family 2 328 1.7E-151 T 12-10-2018 IPR019951 F420-dependent oxidoreductase-predicted, Rv3520c JDM601_3659 4a59603146e7c6e8bb6c1916c2ddfc05 343 Gene3D G3DSA:3.20.20.30 1 342 3.9E-81 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 JDM601_3011 4ebc85aeed1c777ac7ec4bec454da727 449 Gene3D G3DSA:3.90.1660.10 61 242 7.4E-63 T 12-10-2018 JDM601_3011 4ebc85aeed1c777ac7ec4bec454da727 449 TIGRFAM TIGR03553 F420_FbiB_CTERM: F420 biosynthesis protein FbiB, C-terminal domain 256 449 6.9E-98 T 12-10-2018 IPR019943 Coenzyme F420 biosynthesis protein FbiB, C-terminal GO:0016881 KEGG: 00680+6.3.2.31+6.3.2.34|MetaCyc: PWY-5199 JDM601_3011 4ebc85aeed1c777ac7ec4bec454da727 449 Gene3D G3DSA:3.40.109.10 245 448 1.6E-55 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 JDM601_3011 4ebc85aeed1c777ac7ec4bec454da727 449 SUPERFAMILY SSF55469 257 444 1.02E-36 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 JDM601_3011 4ebc85aeed1c777ac7ec4bec454da727 449 Gene3D G3DSA:3.30.1330.100 17 229 7.4E-63 T 12-10-2018 JDM601_3011 4ebc85aeed1c777ac7ec4bec454da727 449 Pfam PF00881 Nitroreductase family 261 429 5.6E-26 T 12-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 JDM601_3011 4ebc85aeed1c777ac7ec4bec454da727 449 Hamap MF_01259 Coenzyme F420:L-glutamate ligase [fbiB]. 18 449 54.068 T 12-10-2018 IPR023661 Coenzyme F420:L-glutamate ligase, Actinobacteria GO:0043773|GO:0046872|GO:0051188 KEGG: 00680+6.3.2.31+6.3.2.34|MetaCyc: PWY-5199 JDM601_3011 4ebc85aeed1c777ac7ec4bec454da727 449 TIGRFAM TIGR01916 F420_cofE: coenzyme F420-0:L-glutamate ligase 13 243 2.6E-78 T 12-10-2018 IPR008225 Coenzyme F420:L-glutamate ligase GO:0043773|GO:0046872|GO:0051188 KEGG: 00680+6.3.2.31+6.3.2.34|MetaCyc: PWY-5199 JDM601_3011 4ebc85aeed1c777ac7ec4bec454da727 449 SUPERFAMILY SSF144010 14 248 1.7E-65 T 12-10-2018 JDM601_3011 4ebc85aeed1c777ac7ec4bec454da727 449 Pfam PF01996 F420-0:Gamma-glutamyl ligase 74 220 4.3E-32 T 12-10-2018 IPR002847 Coenzyme F420:L-glutamate ligase-like domain KEGG: 00680+6.3.2.31+6.3.2.34|MetaCyc: PWY-5199 JDM601_3011 4ebc85aeed1c777ac7ec4bec454da727 449 Pfam PF01996 F420-0:Gamma-glutamyl ligase 23 63 2.6E-6 T 12-10-2018 IPR002847 Coenzyme F420:L-glutamate ligase-like domain KEGG: 00680+6.3.2.31+6.3.2.34|MetaCyc: PWY-5199 JDM601_3557 d2cee2ec6847ddcc7d890db40a32aa65 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 7.0E-37 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3557 d2cee2ec6847ddcc7d890db40a32aa65 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 7.0E-37 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3557 d2cee2ec6847ddcc7d890db40a32aa65 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 7.0E-37 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3557 d2cee2ec6847ddcc7d890db40a32aa65 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 7.0E-37 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3557 d2cee2ec6847ddcc7d890db40a32aa65 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 7.0E-37 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3557 d2cee2ec6847ddcc7d890db40a32aa65 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 7.0E-37 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3557 d2cee2ec6847ddcc7d890db40a32aa65 252 Gene3D G3DSA:3.40.50.720 2 252 1.8E-78 T 12-10-2018 JDM601_3557 d2cee2ec6847ddcc7d890db40a32aa65 252 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 143 171 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 JDM601_3557 d2cee2ec6847ddcc7d890db40a32aa65 252 SUPERFAMILY SSF51735 8 251 4.92E-76 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_3557 d2cee2ec6847ddcc7d890db40a32aa65 252 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 8 187 3.9E-5 T 12-10-2018 JDM601_3557 d2cee2ec6847ddcc7d890db40a32aa65 252 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 249 1.1E-59 T 12-10-2018 JDM601_3557 d2cee2ec6847ddcc7d890db40a32aa65 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 4.2E-9 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3557 d2cee2ec6847ddcc7d890db40a32aa65 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 4.2E-9 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3557 d2cee2ec6847ddcc7d890db40a32aa65 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 4.2E-9 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_1411 71ff3755b2a23a40476c57b765805500 209 Gene3D G3DSA:1.10.357.10 68 208 2.0E-19 T 12-10-2018 JDM601_1411 71ff3755b2a23a40476c57b765805500 209 SUPERFAMILY SSF48498 89 203 9.2E-16 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily JDM601_1411 71ff3755b2a23a40476c57b765805500 209 Pfam PF16859 Bacterial transcriptional repressor C-terminal 88 194 1.1E-14 T 12-10-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal JDM601_1411 71ff3755b2a23a40476c57b765805500 209 Pfam PF00440 Bacterial regulatory proteins, tetR family 29 73 8.0E-16 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_1411 71ff3755b2a23a40476c57b765805500 209 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 29 42 1.7E-6 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_1411 71ff3755b2a23a40476c57b765805500 209 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 50 73 1.7E-6 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_1411 71ff3755b2a23a40476c57b765805500 209 ProSitePatterns PS01081 TetR-type HTH domain signature. 41 72 - T 12-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site JDM601_1411 71ff3755b2a23a40476c57b765805500 209 SUPERFAMILY SSF46689 19 76 6.48E-16 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JDM601_1411 71ff3755b2a23a40476c57b765805500 209 Gene3D G3DSA:1.10.10.60 14 67 3.0E-22 T 12-10-2018 JDM601_0552 19fd3f24f70994928489c3fe471752bb 230 Pfam PF01209 ubiE/COQ5 methyltransferase family 11 227 2.0E-58 T 12-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 JDM601_0552 19fd3f24f70994928489c3fe471752bb 230 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 13 227 1.6E-71 T 12-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 JDM601_0552 19fd3f24f70994928489c3fe471752bb 230 SUPERFAMILY SSF53335 4 223 3.56E-39 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JDM601_0552 19fd3f24f70994928489c3fe471752bb 230 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 24 39 - T 12-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 JDM601_0552 19fd3f24f70994928489c3fe471752bb 230 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 4 227 32.93 T 12-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 JDM601_0552 19fd3f24f70994928489c3fe471752bb 230 Gene3D G3DSA:3.40.50.150 19 228 3.2E-54 T 12-10-2018 JDM601_2515 696007eec8e2b114d5a3cc4aa3fcda79 406 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 11 130 3.6E-9 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 JDM601_2515 696007eec8e2b114d5a3cc4aa3fcda79 406 Gene3D G3DSA:1.20.140.10 248 405 1.6E-41 T 12-10-2018 JDM601_2515 696007eec8e2b114d5a3cc4aa3fcda79 406 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 247 397 2.2E-36 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 JDM601_2515 696007eec8e2b114d5a3cc4aa3fcda79 406 SUPERFAMILY SSF47203 245 402 3.22E-46 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 JDM601_2515 696007eec8e2b114d5a3cc4aa3fcda79 406 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 135 235 2.4E-17 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 JDM601_2515 696007eec8e2b114d5a3cc4aa3fcda79 406 Gene3D G3DSA:2.40.110.10 134 247 2.8E-44 T 12-10-2018 JDM601_2515 696007eec8e2b114d5a3cc4aa3fcda79 406 SUPERFAMILY SSF56645 5 260 3.8E-57 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 JDM601_2515 696007eec8e2b114d5a3cc4aa3fcda79 406 Gene3D G3DSA:1.10.540.10 2 133 7.7E-45 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 JDM601_2135 f0b5b5acf46fcedca16fc54707851bcf 511 PRINTS PR00095 Anthranilate synthase component I signature 338 351 2.2E-24 T 12-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 JDM601_2135 f0b5b5acf46fcedca16fc54707851bcf 511 PRINTS PR00095 Anthranilate synthase component I signature 352 365 2.2E-24 T 12-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 JDM601_2135 f0b5b5acf46fcedca16fc54707851bcf 511 PRINTS PR00095 Anthranilate synthase component I signature 432 446 2.2E-24 T 12-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 JDM601_2135 f0b5b5acf46fcedca16fc54707851bcf 511 PRINTS PR00095 Anthranilate synthase component I signature 447 461 2.2E-24 T 12-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 JDM601_2135 f0b5b5acf46fcedca16fc54707851bcf 511 Pfam PF00425 chorismate binding enzyme 232 490 6.5E-93 T 12-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal JDM601_2135 f0b5b5acf46fcedca16fc54707851bcf 511 TIGRFAM TIGR00564 trpE_most: anthranilate synthase component I 33 498 5.6E-163 T 12-10-2018 IPR005256 Anthranilate synthase component I, PabB-like GO:0000162|GO:0004049 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 JDM601_2135 f0b5b5acf46fcedca16fc54707851bcf 511 SUPERFAMILY SSF56322 23 498 2.22E-148 T 12-10-2018 IPR005801 ADC synthase GO:0009058 JDM601_2135 f0b5b5acf46fcedca16fc54707851bcf 511 Gene3D G3DSA:3.60.120.10 3 509 6.5E-206 T 12-10-2018 IPR005801 ADC synthase GO:0009058 JDM601_2135 f0b5b5acf46fcedca16fc54707851bcf 511 Pfam PF04715 Anthranilate synthase component I, N terminal region 34 175 6.8E-33 T 12-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 JDM601_2501 8a3aac34a8317333d709cc36ef5cd1e6 272 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 268 9.2E-42 T 12-10-2018 JDM601_2501 8a3aac34a8317333d709cc36ef5cd1e6 272 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 154 182 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 JDM601_2501 8a3aac34a8317333d709cc36ef5cd1e6 272 Gene3D G3DSA:3.40.50.720 1 271 2.1E-78 T 12-10-2018 JDM601_2501 8a3aac34a8317333d709cc36ef5cd1e6 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 188 205 1.7E-31 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2501 8a3aac34a8317333d709cc36ef5cd1e6 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 94 105 1.7E-31 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2501 8a3aac34a8317333d709cc36ef5cd1e6 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 232 252 1.7E-31 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2501 8a3aac34a8317333d709cc36ef5cd1e6 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 1.7E-31 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2501 8a3aac34a8317333d709cc36ef5cd1e6 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 186 1.7E-31 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2501 8a3aac34a8317333d709cc36ef5cd1e6 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 137 153 1.7E-31 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2501 8a3aac34a8317333d709cc36ef5cd1e6 272 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 94 105 7.1E-7 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2501 8a3aac34a8317333d709cc36ef5cd1e6 272 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 143 151 7.1E-7 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2501 8a3aac34a8317333d709cc36ef5cd1e6 272 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 167 186 7.1E-7 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2501 8a3aac34a8317333d709cc36ef5cd1e6 272 TIGRFAM TIGR03971 SDR_subfam_1: SDR family mycofactocin-dependent oxidoreductase 4 270 2.6E-111 T 12-10-2018 IPR023985 Mycofactocin-dependent oxidoreductase JDM601_2501 8a3aac34a8317333d709cc36ef5cd1e6 272 SUPERFAMILY SSF51735 5 269 1.27E-61 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_3773 b61f5c8614cf2178bd5d225dd2ee306a 870 Pfam PF00391 PEP-utilising enzyme, mobile domain 793 864 2.8E-22 T 12-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 JDM601_3773 b61f5c8614cf2178bd5d225dd2ee306a 870 SUPERFAMILY SSF51735 1 298 1.83E-47 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_3773 b61f5c8614cf2178bd5d225dd2ee306a 870 SUPERFAMILY SSF52009 766 867 1.7E-28 T 12-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 JDM601_3773 b61f5c8614cf2178bd5d225dd2ee306a 870 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 202 2.3E-21 T 12-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 JDM601_3773 b61f5c8614cf2178bd5d225dd2ee306a 870 Gene3D G3DSA:3.40.50.720 1 303 2.2E-47 T 12-10-2018 JDM601_3773 b61f5c8614cf2178bd5d225dd2ee306a 870 Gene3D G3DSA:3.50.30.10 764 870 4.0E-34 T 12-10-2018 JDM601_1741 1763208d14720654429ba96176f2cfd5 508 SUPERFAMILY SSF53623 110 327 2.75E-41 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 JDM601_1741 1763208d14720654429ba96176f2cfd5 508 SUPERFAMILY SSF51984 7 93 1.57E-13 T 12-10-2018 JDM601_1741 1763208d14720654429ba96176f2cfd5 508 Gene3D G3DSA:3.40.1190.10 93 329 2.9E-47 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 JDM601_1741 1763208d14720654429ba96176f2cfd5 508 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 9 504 31.457 T 12-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 JDM601_1741 1763208d14720654429ba96176f2cfd5 508 Pfam PF02875 Mur ligase family, glutamate ligase domain 331 397 1.6E-7 T 12-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 JDM601_1741 1763208d14720654429ba96176f2cfd5 508 Pfam PF08245 Mur ligase middle domain 116 243 4.1E-18 T 12-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 JDM601_1741 1763208d14720654429ba96176f2cfd5 508 Gene3D G3DSA:3.40.50.720 6 91 6.0E-13 T 12-10-2018 JDM601_1741 1763208d14720654429ba96176f2cfd5 508 SUPERFAMILY SSF53244 331 503 5.49E-28 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 JDM601_1741 1763208d14720654429ba96176f2cfd5 508 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 176 502 4.0E-82 T 12-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 JDM601_1903 fd2af2865c2fd2d64e48dc1dd738ff1a 98 TIGRFAM TIGR03930 WXG100_ESAT6: WXG100 family type VII secretion target 5 93 1.5E-16 T 12-10-2018 IPR010310 Type VII secretion system ESAT-6-like JDM601_1903 fd2af2865c2fd2d64e48dc1dd738ff1a 98 Gene3D G3DSA:1.10.287.1060 1 98 4.4E-56 T 12-10-2018 JDM601_1903 fd2af2865c2fd2d64e48dc1dd738ff1a 98 SUPERFAMILY SSF140453 4 97 6.67E-18 T 12-10-2018 IPR036689 ESAT-6-like superfamily JDM601_1903 fd2af2865c2fd2d64e48dc1dd738ff1a 98 Pfam PF06013 Proteins of 100 residues with WXG 5 89 1.0E-16 T 12-10-2018 IPR010310 Type VII secretion system ESAT-6-like JDM601_3169 a1e634d526f24d9f935b828d4c46c8f2 778 Pfam PF00155 Aminotransferase class I and II 460 773 3.0E-24 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 JDM601_3169 a1e634d526f24d9f935b828d4c46c8f2 778 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 246 424 4.7E-21 T 12-10-2018 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 JDM601_3169 a1e634d526f24d9f935b828d4c46c8f2 778 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 636 649 - T 12-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 JDM601_3169 a1e634d526f24d9f935b828d4c46c8f2 778 Gene3D G3DSA:3.40.50.300 1 180 2.3E-20 T 12-10-2018 JDM601_3169 a1e634d526f24d9f935b828d4c46c8f2 778 Gene3D G3DSA:3.90.1150.10 459 773 9.2E-73 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 JDM601_3169 a1e634d526f24d9f935b828d4c46c8f2 778 Gene3D G3DSA:3.40.50.880 245 438 2.1E-7 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like JDM601_3169 a1e634d526f24d9f935b828d4c46c8f2 778 SUPERFAMILY SSF52540 1 191 2.31E-40 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_3169 a1e634d526f24d9f935b828d4c46c8f2 778 TIGRFAM TIGR00379 cobB: cobyrinic acid a,c-diamide synthase 2 433 1.1E-114 T 12-10-2018 IPR004484 Cobyrinic acid a,c-diamide synthase CbiA GO:0009236|GO:0042242 JDM601_3169 a1e634d526f24d9f935b828d4c46c8f2 778 SUPERFAMILY SSF52317 243 438 7.76E-28 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like JDM601_3169 a1e634d526f24d9f935b828d4c46c8f2 778 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 1 183 1.9E-14 T 12-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain JDM601_3169 a1e634d526f24d9f935b828d4c46c8f2 778 SUPERFAMILY SSF53383 453 777 6.12E-52 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase JDM601_3169 a1e634d526f24d9f935b828d4c46c8f2 778 Hamap MF_00027 Hydrogenobyrinate a,c-diamide synthase [cobB]. 1 426 38.907 T 12-10-2018 IPR004484 Cobyrinic acid a,c-diamide synthase CbiA GO:0009236|GO:0042242 JDM601_3169 a1e634d526f24d9f935b828d4c46c8f2 778 Gene3D G3DSA:3.40.640.10 471 684 9.2E-73 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 JDM601_0721 604bdb37577934e2628429e59bd98e21 260 Pfam PF00378 Enoyl-CoA hydratase/isomerase 9 220 2.8E-46 T 12-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 JDM601_0721 604bdb37577934e2628429e59bd98e21 260 SUPERFAMILY SSF52096 3 219 3.81E-63 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily JDM601_0721 604bdb37577934e2628429e59bd98e21 260 Gene3D G3DSA:3.90.226.10 1 260 1.6E-106 T 12-10-2018 JDM601_1272 79802ab32a63e0a2a4d6e7806ca22d06 381 Pfam PF00149 Calcineurin-like phosphoesterase 1 170 1.1E-12 T 12-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 JDM601_1272 79802ab32a63e0a2a4d6e7806ca22d06 381 Gene3D G3DSA:3.60.21.10 1 250 6.7E-33 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like JDM601_1272 79802ab32a63e0a2a4d6e7806ca22d06 381 PIRSF PIRSF033093 1 381 3.0E-153 T 12-10-2018 IPR014577 Uncharacterised conserved protein UCP033093, metallophosphoesterase-type JDM601_1272 79802ab32a63e0a2a4d6e7806ca22d06 381 SUPERFAMILY SSF56300 1 311 5.97E-39 T 12-10-2018 JDM601_1805 d9204662994de0d192b7ec262d328dff 479 SUPERFAMILY SSF50249 207 289 2.64E-27 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold JDM601_1805 d9204662994de0d192b7ec262d328dff 479 Gene3D G3DSA:2.40.50.140 204 283 3.6E-30 T 12-10-2018 JDM601_1805 d9204662994de0d192b7ec262d328dff 479 Pfam PF00575 S1 RNA binding domain 121 188 1.6E-14 T 12-10-2018 IPR003029 S1 domain GO:0003676 JDM601_1805 d9204662994de0d192b7ec262d328dff 479 Pfam PF00575 S1 RNA binding domain 291 363 1.6E-22 T 12-10-2018 IPR003029 S1 domain GO:0003676 JDM601_1805 d9204662994de0d192b7ec262d328dff 479 Pfam PF00575 S1 RNA binding domain 206 277 1.0E-26 T 12-10-2018 IPR003029 S1 domain GO:0003676 JDM601_1805 d9204662994de0d192b7ec262d328dff 479 Pfam PF00575 S1 RNA binding domain 33 105 1.0E-15 T 12-10-2018 IPR003029 S1 domain GO:0003676 JDM601_1805 d9204662994de0d192b7ec262d328dff 479 SMART SM00316 207 277 2.5E-28 T 12-10-2018 IPR022967 RNA-binding domain, S1 JDM601_1805 d9204662994de0d192b7ec262d328dff 479 SMART SM00316 292 363 1.5E-23 T 12-10-2018 IPR022967 RNA-binding domain, S1 JDM601_1805 d9204662994de0d192b7ec262d328dff 479 SMART SM00316 34 105 7.5E-17 T 12-10-2018 IPR022967 RNA-binding domain, S1 JDM601_1805 d9204662994de0d192b7ec262d328dff 479 SMART SM00316 121 188 2.1E-9 T 12-10-2018 IPR022967 RNA-binding domain, S1 JDM601_1805 d9204662994de0d192b7ec262d328dff 479 Gene3D G3DSA:2.40.50.140 284 368 2.2E-28 T 12-10-2018 JDM601_1805 d9204662994de0d192b7ec262d328dff 479 PRINTS PR00681 Ribosomal protein S1 signature 172 192 1.5E-87 T 12-10-2018 JDM601_1805 d9204662994de0d192b7ec262d328dff 479 PRINTS PR00681 Ribosomal protein S1 signature 346 364 1.5E-87 T 12-10-2018 JDM601_1805 d9204662994de0d192b7ec262d328dff 479 PRINTS PR00681 Ribosomal protein S1 signature 54 68 1.5E-87 T 12-10-2018 JDM601_1805 d9204662994de0d192b7ec262d328dff 479 PRINTS PR00681 Ribosomal protein S1 signature 102 121 1.5E-87 T 12-10-2018 JDM601_1805 d9204662994de0d192b7ec262d328dff 479 PRINTS PR00681 Ribosomal protein S1 signature 143 160 1.5E-87 T 12-10-2018 JDM601_1805 d9204662994de0d192b7ec262d328dff 479 PRINTS PR00681 Ribosomal protein S1 signature 36 54 1.5E-87 T 12-10-2018 JDM601_1805 d9204662994de0d192b7ec262d328dff 479 PRINTS PR00681 Ribosomal protein S1 signature 229 250 1.5E-87 T 12-10-2018 JDM601_1805 d9204662994de0d192b7ec262d328dff 479 PRINTS PR00681 Ribosomal protein S1 signature 307 326 1.5E-87 T 12-10-2018 JDM601_1805 d9204662994de0d192b7ec262d328dff 479 PRINTS PR00681 Ribosomal protein S1 signature 126 142 1.5E-87 T 12-10-2018 JDM601_1805 d9204662994de0d192b7ec262d328dff 479 Gene3D G3DSA:2.40.50.140 21 117 3.1E-23 T 12-10-2018 JDM601_1805 d9204662994de0d192b7ec262d328dff 479 Gene3D G3DSA:2.40.50.140 118 200 1.2E-10 T 12-10-2018 JDM601_1805 d9204662994de0d192b7ec262d328dff 479 SUPERFAMILY SSF50249 107 191 2.98E-14 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold JDM601_1805 d9204662994de0d192b7ec262d328dff 479 SUPERFAMILY SSF50249 28 130 1.12E-22 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold JDM601_1805 d9204662994de0d192b7ec262d328dff 479 SUPERFAMILY SSF50249 277 365 5.08E-24 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold JDM601_1828 7fb4ce77e20e630bf753d9794274cf45 828 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 822 39.206 T 12-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 JDM601_1828 7fb4ce77e20e630bf753d9794274cf45 828 Gene3D G3DSA:3.30.56.10 413 485 9.4E-18 T 12-10-2018 JDM601_1828 7fb4ce77e20e630bf753d9794274cf45 828 SUPERFAMILY SSF54991 733 828 2.22E-27 T 12-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 JDM601_1828 7fb4ce77e20e630bf753d9794274cf45 828 SUPERFAMILY SSF46955 414 485 5.68E-15 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily JDM601_1828 7fb4ce77e20e630bf753d9794274cf45 828 SUPERFAMILY SSF50249 44 197 1.32E-35 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold JDM601_1828 7fb4ce77e20e630bf753d9794274cf45 828 Pfam PF03484 tRNA synthetase B5 domain 417 481 4.0E-15 T 12-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 JDM601_1828 7fb4ce77e20e630bf753d9794274cf45 828 SUPERFAMILY SSF56037 205 401 1.54E-58 T 12-10-2018 JDM601_1828 7fb4ce77e20e630bf753d9794274cf45 828 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 828 4.5E-167 T 12-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 JDM601_1828 7fb4ce77e20e630bf753d9794274cf45 828 Pfam PF03147 Ferredoxin-fold anticodon binding domain 735 828 6.4E-26 T 12-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 JDM601_1828 7fb4ce77e20e630bf753d9794274cf45 828 Gene3D G3DSA:2.40.50.140 44 161 2.7E-55 T 12-10-2018 JDM601_1828 7fb4ce77e20e630bf753d9794274cf45 828 SMART SM00873 219 392 1.8E-71 T 12-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 JDM601_1828 7fb4ce77e20e630bf753d9794274cf45 828 Gene3D G3DSA:3.50.40.10 206 401 9.2E-63 T 12-10-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 KEGG: 00970+6.1.1.20 JDM601_1828 7fb4ce77e20e630bf753d9794274cf45 828 SMART SM00874 413 481 3.7E-20 T 12-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 JDM601_1828 7fb4ce77e20e630bf753d9794274cf45 828 Gene3D G3DSA:3.30.56.10 7 187 2.7E-55 T 12-10-2018 JDM601_1828 7fb4ce77e20e630bf753d9794274cf45 828 SMART SM00896 735 828 4.1E-42 T 12-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 JDM601_1828 7fb4ce77e20e630bf753d9794274cf45 828 SUPERFAMILY SSF55681 477 723 1.49E-35 T 12-10-2018 JDM601_1828 7fb4ce77e20e630bf753d9794274cf45 828 Pfam PF03483 B3/4 domain 221 392 1.1E-56 T 12-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 JDM601_1828 7fb4ce77e20e630bf753d9794274cf45 828 Gene3D G3DSA:3.30.70.380 737 828 2.8E-27 T 12-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 JDM601_1828 7fb4ce77e20e630bf753d9794274cf45 828 Pfam PF01588 Putative tRNA binding domain 51 147 8.3E-20 T 12-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 JDM601_1828 7fb4ce77e20e630bf753d9794274cf45 828 Gene3D G3DSA:3.30.930.10 496 724 1.3E-48 T 12-10-2018 JDM601_3453 e0ef5046a2204dbf89551f9d963e66bc 329 Gene3D G3DSA:3.50.30.50 73 329 3.8E-24 T 12-10-2018 IPR037175 Kynurenine formamidase superfamily GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 JDM601_3453 e0ef5046a2204dbf89551f9d963e66bc 329 Pfam PF04199 Putative cyclase 108 260 3.3E-22 T 12-10-2018 IPR007325 Kynurenine formamidase/cyclase-like GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 JDM601_3453 e0ef5046a2204dbf89551f9d963e66bc 329 SUPERFAMILY SSF102198 103 328 3.4E-26 T 12-10-2018 IPR037175 Kynurenine formamidase superfamily GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 JDM601_1742 fb6ffc24e14c4591c75ca2ee6d405f31 522 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 48 400 4.3E-117 T 12-10-2018 IPR013437 Probable peptidoglycan glycosyltransferase FtsW GO:0009252|GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 JDM601_1742 fb6ffc24e14c4591c75ca2ee6d405f31 522 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 359 383 - T 12-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 JDM601_1742 fb6ffc24e14c4591c75ca2ee6d405f31 522 Pfam PF01098 Cell cycle protein 47 401 5.1E-121 T 12-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 JDM601_3237 6edcfc715becae802b62903833f7aa23 539 Gene3D G3DSA:3.50.7.10 190 370 1.0E-205 T 12-10-2018 IPR027409 GroEL-like apical domain superfamily JDM601_3237 6edcfc715becae802b62903833f7aa23 539 TIGRFAM TIGR02348 GroEL: chaperonin GroL 2 524 1.7E-219 T 12-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 JDM601_3237 6edcfc715becae802b62903833f7aa23 539 PRINTS PR00298 60kDa chaperonin signature 26 52 1.1E-65 T 12-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 JDM601_3237 6edcfc715becae802b62903833f7aa23 539 PRINTS PR00298 60kDa chaperonin signature 266 289 1.1E-65 T 12-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 JDM601_3237 6edcfc715becae802b62903833f7aa23 539 PRINTS PR00298 60kDa chaperonin signature 396 417 1.1E-65 T 12-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 JDM601_3237 6edcfc715becae802b62903833f7aa23 539 PRINTS PR00298 60kDa chaperonin signature 82 109 1.1E-65 T 12-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 JDM601_3237 6edcfc715becae802b62903833f7aa23 539 PRINTS PR00298 60kDa chaperonin signature 348 373 1.1E-65 T 12-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 JDM601_3237 6edcfc715becae802b62903833f7aa23 539 SUPERFAMILY SSF54849 136 202 2.75E-21 T 12-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily JDM601_3237 6edcfc715becae802b62903833f7aa23 539 Gene3D G3DSA:1.10.560.10 7 520 1.0E-205 T 12-10-2018 IPR027413 GroEL-like equatorial domain superfamily JDM601_3237 6edcfc715becae802b62903833f7aa23 539 Pfam PF00118 TCP-1/cpn60 chaperonin family 22 524 2.3E-84 T 12-10-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 JDM601_3237 6edcfc715becae802b62903833f7aa23 539 Hamap MF_00600 60 kDa chaperonin [groL]. 1 537 38.445 T 12-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 JDM601_3237 6edcfc715becae802b62903833f7aa23 539 SUPERFAMILY SSF48592 6 520 2.33E-68 T 12-10-2018 IPR027413 GroEL-like equatorial domain superfamily JDM601_3237 6edcfc715becae802b62903833f7aa23 539 ProSitePatterns PS00296 Chaperonins cpn60 signature. 403 414 - T 12-10-2018 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 JDM601_3237 6edcfc715becae802b62903833f7aa23 539 Gene3D G3DSA:3.30.260.10 135 408 1.0E-205 T 12-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily JDM601_3237 6edcfc715becae802b62903833f7aa23 539 SUPERFAMILY SSF52029 183 374 1.45E-72 T 12-10-2018 IPR027409 GroEL-like apical domain superfamily JDM601_0268 5e9ec2c5ac941d97239be5bcaa3bb27c 325 Gene3D G3DSA:3.30.1330.10 1 159 1.0E-49 T 12-10-2018 IPR036921 PurM-like, N-terminal domain superfamily JDM601_0268 5e9ec2c5ac941d97239be5bcaa3bb27c 325 SUPERFAMILY SSF56042 159 323 1.5E-37 T 12-10-2018 IPR036676 PurM-like, C-terminal domain superfamily JDM601_0268 5e9ec2c5ac941d97239be5bcaa3bb27c 325 Pfam PF00586 AIR synthase related protein, N-terminal domain 46 152 6.2E-19 T 12-10-2018 IPR016188 PurM-like, N-terminal domain JDM601_0268 5e9ec2c5ac941d97239be5bcaa3bb27c 325 Gene3D G3DSA:3.90.650.10 160 310 5.9E-40 T 12-10-2018 IPR036676 PurM-like, C-terminal domain superfamily JDM601_0268 5e9ec2c5ac941d97239be5bcaa3bb27c 325 Pfam PF02769 AIR synthase related protein, C-terminal domain 166 304 1.2E-16 T 12-10-2018 IPR010918 PurM-like, C-terminal domain JDM601_0268 5e9ec2c5ac941d97239be5bcaa3bb27c 325 Hamap MF_00625 Selenide, water dikinase [selD]. 2 325 36.116 T 12-10-2018 IPR023061 Selenophosphate synthetase, class I GO:0004756|GO:0005524|GO:0016260 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 JDM601_0268 5e9ec2c5ac941d97239be5bcaa3bb27c 325 SUPERFAMILY SSF55326 4 157 5.08E-40 T 12-10-2018 IPR036921 PurM-like, N-terminal domain superfamily JDM601_0268 5e9ec2c5ac941d97239be5bcaa3bb27c 325 TIGRFAM TIGR00476 selD: selenide, water dikinase 4 306 1.8E-116 T 12-10-2018 IPR004536 Selenophosphate synthetase GO:0005524 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 JDM601_0268 5e9ec2c5ac941d97239be5bcaa3bb27c 325 PIRSF PIRSF036407 1 308 1.6E-100 T 12-10-2018 IPR004536 Selenophosphate synthetase GO:0005524 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 JDM601_1740 bb564d4d7f27f8b5b7060eed86c544f3 359 ProSitePatterns PS01348 MraY family signature 2. 179 190 - T 12-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 JDM601_1740 bb564d4d7f27f8b5b7060eed86c544f3 359 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 16 342 7.9E-83 T 12-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 JDM601_1740 bb564d4d7f27f8b5b7060eed86c544f3 359 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 3 350 22.825 T 12-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 JDM601_1740 bb564d4d7f27f8b5b7060eed86c544f3 359 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 46 58 3.3E-5 T 12-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 JDM601_1740 bb564d4d7f27f8b5b7060eed86c544f3 359 Pfam PF00953 Glycosyl transferase family 4 86 276 6.2E-39 T 12-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 JDM601_1740 bb564d4d7f27f8b5b7060eed86c544f3 359 ProSitePatterns PS01347 MraY family signature 1. 46 58 - T 12-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 JDM601_1761 70c1103d8ed1ce6885688ac24030a52f 166 Pfam PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family 74 163 1.2E-25 T 12-10-2018 IPR007269 Isoprenylcysteine carboxyl methyltransferase GO:0004671|GO:0006481|GO:0016021 Reactome: R-HSA-163841 JDM601_1761 70c1103d8ed1ce6885688ac24030a52f 166 Gene3D G3DSA:1.20.120.1630 2 164 1.0E-16 T 12-10-2018 JDM601_4344 7c3732d509d18f2e6a112e2c8a2dfe63 348 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 19 253 3.9E-56 T 12-10-2018 IPR028055 Membrane insertase YidC/Oxa1, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JDM601_4344 7c3732d509d18f2e6a112e2c8a2dfe63 348 Pfam PF02096 60Kd inner membrane protein 20 253 3.0E-49 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 JDM601_1632 5c969e9060b03ba47b96fdc9a4d80007 499 Gene3D G3DSA:3.30.420.40 153 316 2.6E-40 T 12-10-2018 JDM601_1632 5c969e9060b03ba47b96fdc9a4d80007 499 Pfam PF00012 Hsp70 protein 154 329 4.2E-16 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 JDM601_1632 5c969e9060b03ba47b96fdc9a4d80007 499 PRINTS PR01217 Proline rich extensin signature 383 399 4.4E-11 T 12-10-2018 JDM601_1632 5c969e9060b03ba47b96fdc9a4d80007 499 PRINTS PR01217 Proline rich extensin signature 361 382 4.4E-11 T 12-10-2018 JDM601_1632 5c969e9060b03ba47b96fdc9a4d80007 499 PRINTS PR01217 Proline rich extensin signature 463 488 4.4E-11 T 12-10-2018 JDM601_1632 5c969e9060b03ba47b96fdc9a4d80007 499 PRINTS PR01217 Proline rich extensin signature 336 348 4.4E-11 T 12-10-2018 JDM601_1632 5c969e9060b03ba47b96fdc9a4d80007 499 Gene3D G3DSA:3.90.640.10 191 266 2.6E-40 T 12-10-2018 JDM601_1632 5c969e9060b03ba47b96fdc9a4d80007 499 Gene3D G3DSA:3.30.420.40 47 328 2.6E-40 T 12-10-2018 JDM601_1632 5c969e9060b03ba47b96fdc9a4d80007 499 SUPERFAMILY SSF53067 154 329 6.77E-29 T 12-10-2018 JDM601_4187 62cfad2a585404c0ea2473d45ce03df7 247 SUPERFAMILY SSF141523 124 245 1.44E-28 T 12-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like JDM601_4187 62cfad2a585404c0ea2473d45ce03df7 247 Gene3D G3DSA:2.60.40.3710 19 119 4.8E-24 T 12-10-2018 JDM601_4187 62cfad2a585404c0ea2473d45ce03df7 247 Gene3D G3DSA:2.40.440.10 120 247 1.1E-46 T 12-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like JDM601_4187 62cfad2a585404c0ea2473d45ce03df7 247 Pfam PF03734 L,D-transpeptidase catalytic domain 125 245 1.5E-17 T 12-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 JDM601_1700 8c2bd568d284bc10497ce44476b8295a 324 Pfam PF00294 pfkB family carbohydrate kinase 13 295 2.1E-49 T 12-10-2018 IPR011611 Carbohydrate kinase PfkB JDM601_1700 8c2bd568d284bc10497ce44476b8295a 324 SUPERFAMILY SSF53613 2 298 8.11E-53 T 12-10-2018 IPR029056 Ribokinase-like JDM601_1700 8c2bd568d284bc10497ce44476b8295a 324 Gene3D G3DSA:3.40.1190.20 1 320 3.6E-79 T 12-10-2018 IPR029056 Ribokinase-like JDM601_1700 8c2bd568d284bc10497ce44476b8295a 324 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 47 71 - T 12-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 JDM601_3990 2ac5a396e0e1259776867aaeb6841957 349 SMART SM00859 7 122 5.8E-36 T 12-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 JDM601_3990 2ac5a396e0e1259776867aaeb6841957 349 PIRSF PIRSF000148 5 349 4.8E-109 T 12-10-2018 JDM601_3990 2ac5a396e0e1259776867aaeb6841957 349 Gene3D G3DSA:3.30.360.10 133 334 9.5E-135 T 12-10-2018 JDM601_3990 2ac5a396e0e1259776867aaeb6841957 349 SUPERFAMILY SSF55347 134 334 2.06E-58 T 12-10-2018 JDM601_3990 2ac5a396e0e1259776867aaeb6841957 349 Gene3D G3DSA:3.40.50.720 8 345 9.5E-135 T 12-10-2018 JDM601_3990 2ac5a396e0e1259776867aaeb6841957 349 SUPERFAMILY SSF51735 6 161 9.53E-45 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_3990 2ac5a396e0e1259776867aaeb6841957 349 TIGRFAM TIGR01296 asd_B: aspartate-semialdehyde dehydrogenase 7 347 8.9E-142 T 12-10-2018 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 JDM601_3990 2ac5a396e0e1259776867aaeb6841957 349 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 144 333 5.2E-49 T 12-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 JDM601_3990 2ac5a396e0e1259776867aaeb6841957 349 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 248 262 - T 12-10-2018 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 JDM601_3990 2ac5a396e0e1259776867aaeb6841957 349 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 8 117 1.1E-28 T 12-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 JDM601_3990 2ac5a396e0e1259776867aaeb6841957 349 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 5 347 34.674 T 12-10-2018 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 JDM601_1023 f1e484af184c9c07a9d7849e663d5a48 464 SMART SM00116 343 396 2.1E-4 T 12-10-2018 IPR000644 CBS domain JDM601_1023 f1e484af184c9c07a9d7849e663d5a48 464 SMART SM00116 413 458 2.2 T 12-10-2018 IPR000644 CBS domain JDM601_1023 f1e484af184c9c07a9d7849e663d5a48 464 TIGRFAM TIGR01137 cysta_beta: cystathionine beta-synthase 4 458 6.3E-199 T 12-10-2018 IPR005857 Cystathionine beta-synthase GO:0004122|GO:0005737|GO:0019343 KEGG: 00260+4.2.1.22|KEGG: 00270+4.2.1.22|MetaCyc: PWY-801 JDM601_1023 f1e484af184c9c07a9d7849e663d5a48 464 Pfam PF00571 CBS domain 413 458 3.3E-6 T 12-10-2018 IPR000644 CBS domain JDM601_1023 f1e484af184c9c07a9d7849e663d5a48 464 Pfam PF00571 CBS domain 342 395 4.3E-7 T 12-10-2018 IPR000644 CBS domain JDM601_1023 f1e484af184c9c07a9d7849e663d5a48 464 SUPERFAMILY SSF54631 333 458 3.54E-19 T 12-10-2018 JDM601_1023 f1e484af184c9c07a9d7849e663d5a48 464 SUPERFAMILY SSF53686 1 317 1.3E-91 T 12-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme JDM601_1023 f1e484af184c9c07a9d7849e663d5a48 464 Gene3D G3DSA:3.10.580.10 323 462 2.2E-19 T 12-10-2018 JDM601_1023 f1e484af184c9c07a9d7849e663d5a48 464 Gene3D G3DSA:3.40.50.1100 9 304 1.5E-115 T 12-10-2018 JDM601_1023 f1e484af184c9c07a9d7849e663d5a48 464 Gene3D G3DSA:3.40.50.1100 41 154 1.5E-115 T 12-10-2018 JDM601_1023 f1e484af184c9c07a9d7849e663d5a48 464 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 8 295 8.8E-63 T 12-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme JDM601_1068 71f13314ed79f8c2536a89d22791dc02 399 SUPERFAMILY SSF103473 8 387 2.62E-53 T 12-10-2018 IPR036259 MFS transporter superfamily JDM601_1068 71f13314ed79f8c2536a89d22791dc02 399 Gene3D G3DSA:1.20.1250.20 11 387 2.3E-45 T 12-10-2018 JDM601_1068 71f13314ed79f8c2536a89d22791dc02 399 Pfam PF07690 Major Facilitator Superfamily 22 237 8.9E-27 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 JDM601_0679 3fa88cdb95667e5311ada9a5a1fb4094 233 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 59 2.1E-12 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_0679 3fa88cdb95667e5311ada9a5a1fb4094 233 SUPERFAMILY SSF46689 5 70 1.69E-14 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JDM601_0679 3fa88cdb95667e5311ada9a5a1fb4094 233 Gene3D G3DSA:1.10.357.10 3 212 1.6E-40 T 12-10-2018 JDM601_0679 3fa88cdb95667e5311ada9a5a1fb4094 233 SUPERFAMILY SSF48498 82 199 2.74E-22 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily JDM601_0679 3fa88cdb95667e5311ada9a5a1fb4094 233 Pfam PF13305 WHG domain 85 189 2.9E-11 T 12-10-2018 IPR025996 WHG domain JDM601_0679 3fa88cdb95667e5311ada9a5a1fb4094 233 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 34 57 6.5E-6 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_0679 3fa88cdb95667e5311ada9a5a1fb4094 233 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 13 26 6.5E-6 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_0211 84c6131baf9485a85de238d4161f8194 152 SMART SM00347 31 134 8.0E-16 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 JDM601_0211 84c6131baf9485a85de238d4161f8194 152 SUPERFAMILY SSF46785 4 148 6.83E-28 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JDM601_0211 84c6131baf9485a85de238d4161f8194 152 Pfam PF12802 MarR family 36 97 1.6E-14 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 JDM601_0211 84c6131baf9485a85de238d4161f8194 152 Gene3D G3DSA:1.10.10.10 5 151 3.8E-37 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JDM601_1841 b172e1a317171ed4e184b5bb54935bce 996 SUPERFAMILY SSF56801 440 960 2.35E-45 T 12-10-2018 JDM601_1841 b172e1a317171ed4e184b5bb54935bce 996 Pfam PF00501 AMP-binding enzyme 455 804 1.6E-23 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 JDM601_1841 b172e1a317171ed4e184b5bb54935bce 996 Gene3D G3DSA:3.40.50.12780 435 861 4.4E-32 T 12-10-2018 JDM601_1841 b172e1a317171ed4e184b5bb54935bce 996 Gene3D G3DSA:3.40.50.1820 59 346 1.4E-19 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_1841 b172e1a317171ed4e184b5bb54935bce 996 SUPERFAMILY SSF53474 52 358 2.4E-30 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_1841 b172e1a317171ed4e184b5bb54935bce 996 Pfam PF12697 Alpha/beta hydrolase family 70 341 4.8E-6 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 JDM601_1177 65724ff6b46ca02ac2c3b4070644467c 306 SUPERFAMILY SSF51161 66 286 4.57E-40 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily JDM601_1177 65724ff6b46ca02ac2c3b4070644467c 306 Gene3D G3DSA:2.160.10.10 140 299 2.5E-70 T 12-10-2018 JDM601_1177 65724ff6b46ca02ac2c3b4070644467c 306 Gene3D G3DSA:3.30.70.2010 1 99 2.0E-36 T 12-10-2018 JDM601_1177 65724ff6b46ca02ac2c3b4070644467c 306 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 221 253 2.7E-15 T 12-10-2018 IPR001451 Hexapeptide repeat JDM601_1177 65724ff6b46ca02ac2c3b4070644467c 306 Pfam PF14789 Tetrahydrodipicolinate N-succinyltransferase middle 100 139 7.5E-21 T 12-10-2018 IPR032784 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, middle domain KEGG: 00300+2.3.1.117 JDM601_1177 65724ff6b46ca02ac2c3b4070644467c 306 Hamap MF_02122 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [dapD]. 1 304 42.374 T 12-10-2018 IPR026586 Type 2 tetrahydrodipicolinate N-succinyltransferase family GO:0008666 KEGG: 00300+2.3.1.117 JDM601_1177 65724ff6b46ca02ac2c3b4070644467c 306 Gene3D G3DSA:3.30.60.70 100 139 5.9E-26 T 12-10-2018 IPR038361 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, middle domain superfamily KEGG: 00300+2.3.1.117 JDM601_1177 65724ff6b46ca02ac2c3b4070644467c 306 TIGRFAM TIGR03535 DapD_actino: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 1 306 1.7E-156 T 12-10-2018 IPR019875 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, actinobacteria KEGG: 00300+2.3.1.117 JDM601_3426 b788283db51030ad9224c488c81b612b 524 Pfam PF13193 AMP-binding enzyme C-terminal domain 428 505 7.3E-14 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain JDM601_3426 b788283db51030ad9224c488c81b612b 524 Gene3D G3DSA:3.30.300.310 415 520 2.7E-28 T 12-10-2018 JDM601_3426 b788283db51030ad9224c488c81b612b 524 Gene3D G3DSA:3.40.50.12780 32 412 7.6E-78 T 12-10-2018 JDM601_3426 b788283db51030ad9224c488c81b612b 524 Pfam PF00501 AMP-binding enzyme 51 419 1.1E-64 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 JDM601_3426 b788283db51030ad9224c488c81b612b 524 SUPERFAMILY SSF56801 11 516 3.92E-108 T 12-10-2018 JDM601_2625 a94d0b4adea1ddf991c8d9a826d97ec3 282 SUPERFAMILY SSF51306 60 273 2.62E-45 T 12-10-2018 IPR036286 LexA/Signal peptidase-like superfamily JDM601_2625 a94d0b4adea1ddf991c8d9a826d97ec3 282 Gene3D G3DSA:2.10.109.10 194 276 7.2E-9 T 12-10-2018 JDM601_2625 a94d0b4adea1ddf991c8d9a826d97ec3 282 Gene3D G3DSA:2.10.109.10 57 174 5.1E-13 T 12-10-2018 JDM601_2625 a94d0b4adea1ddf991c8d9a826d97ec3 282 ProSitePatterns PS00501 Signal peptidases I serine active site. 70 77 - T 12-10-2018 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: R-HSA-1799339|Reactome: R-HSA-381771|Reactome: R-HSA-400511|Reactome: R-HSA-422085 JDM601_2625 a94d0b4adea1ddf991c8d9a826d97ec3 282 Pfam PF10502 Signal peptidase, peptidase S26 139 223 4.3E-5 T 12-10-2018 IPR019533 Peptidase S26 JDM601_2625 a94d0b4adea1ddf991c8d9a826d97ec3 282 Pfam PF00717 Peptidase S24-like 68 114 5.3E-8 T 12-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C JDM601_2625 a94d0b4adea1ddf991c8d9a826d97ec3 282 ProSitePatterns PS00761 Signal peptidases I signature 3. 209 222 - T 12-10-2018 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 JDM601_2625 a94d0b4adea1ddf991c8d9a826d97ec3 282 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 47 266 1.6E-34 T 12-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 JDM601_2625 a94d0b4adea1ddf991c8d9a826d97ec3 282 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 148 160 7.6E-22 T 12-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 JDM601_2625 a94d0b4adea1ddf991c8d9a826d97ec3 282 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 204 223 7.6E-22 T 12-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 JDM601_2625 a94d0b4adea1ddf991c8d9a826d97ec3 282 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 61 77 7.6E-22 T 12-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 JDM601_4099 49fb7fd72c112ce39cb52eeaf533e82c 258 SUPERFAMILY SSF51735 10 256 1.2E-35 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_4099 49fb7fd72c112ce39cb52eeaf533e82c 258 Pfam PF00106 short chain dehydrogenase 12 207 3.5E-25 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_4099 49fb7fd72c112ce39cb52eeaf533e82c 258 Gene3D G3DSA:3.40.50.720 12 252 2.9E-32 T 12-10-2018 JDM601_4099 49fb7fd72c112ce39cb52eeaf533e82c 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 164 183 7.8E-12 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_4099 49fb7fd72c112ce39cb52eeaf533e82c 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 185 202 7.8E-12 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_4099 49fb7fd72c112ce39cb52eeaf533e82c 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 7.8E-12 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_4099 49fb7fd72c112ce39cb52eeaf533e82c 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 138 154 7.8E-12 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_4099 49fb7fd72c112ce39cb52eeaf533e82c 258 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 151 179 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 JDM601_1663 fc18720ef47580f063a3e0458d6427de 227 Gene3D G3DSA:3.40.50.1000 12 196 9.1E-56 T 12-10-2018 IPR023214 HAD superfamily JDM601_1663 fc18720ef47580f063a3e0458d6427de 227 SUPERFAMILY SSF56784 10 225 4.07E-46 T 12-10-2018 IPR036412 HAD-like superfamily JDM601_1663 fc18720ef47580f063a3e0458d6427de 227 Pfam PF13419 Haloacid dehalogenase-like hydrolase 12 188 1.8E-28 T 12-10-2018 JDM601_1663 fc18720ef47580f063a3e0458d6427de 227 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 150 170 1.8E-5 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 JDM601_1663 fc18720ef47580f063a3e0458d6427de 227 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 177 190 1.8E-5 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 JDM601_1663 fc18720ef47580f063a3e0458d6427de 227 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 9 20 1.8E-5 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 JDM601_1663 fc18720ef47580f063a3e0458d6427de 227 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 101 114 1.8E-5 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 JDM601_1663 fc18720ef47580f063a3e0458d6427de 227 Gene3D G3DSA:1.10.150.240 23 87 9.1E-56 T 12-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 JDM601_3814 7db5553b0d3e6a876ff847631a6f8ca7 507 Pfam PF00501 AMP-binding enzyme 5 394 1.7E-72 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 JDM601_3814 7db5553b0d3e6a876ff847631a6f8ca7 507 Pfam PF13193 AMP-binding enzyme C-terminal domain 404 479 1.4E-10 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain JDM601_3814 7db5553b0d3e6a876ff847631a6f8ca7 507 Gene3D G3DSA:3.30.300.310 392 492 9.7E-23 T 12-10-2018 JDM601_3814 7db5553b0d3e6a876ff847631a6f8ca7 507 ProSitePatterns PS00455 Putative AMP-binding domain signature. 148 159 - T 12-10-2018 IPR020845 AMP-binding, conserved site JDM601_3814 7db5553b0d3e6a876ff847631a6f8ca7 507 SUPERFAMILY SSF56801 5 489 2.35E-112 T 12-10-2018 JDM601_3814 7db5553b0d3e6a876ff847631a6f8ca7 507 Gene3D G3DSA:3.40.50.12780 3 391 4.6E-86 T 12-10-2018 JDM601_2321 a5c84a398f9f69b8a8d5bf982a16c02d 243 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JDM601_2321 a5c84a398f9f69b8a8d5bf982a16c02d 243 SUPERFAMILY SSF52540 7 210 1.0E-61 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_2321 a5c84a398f9f69b8a8d5bf982a16c02d 243 Pfam PF00005 ABC transporter 23 161 1.9E-27 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JDM601_2321 a5c84a398f9f69b8a8d5bf982a16c02d 243 SMART SM00382 31 211 6.6E-17 T 12-10-2018 IPR003593 AAA+ ATPase domain JDM601_2321 a5c84a398f9f69b8a8d5bf982a16c02d 243 Gene3D G3DSA:3.40.50.300 5 232 8.2E-60 T 12-10-2018 JDM601_2022 1143c13232dbed7e510c66a73b4d745a 185 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 95 182 2.5E-14 T 12-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain JDM601_2022 1143c13232dbed7e510c66a73b4d745a 185 Gene3D G3DSA:3.10.50.40 71 185 2.3E-23 T 12-10-2018 JDM601_2022 1143c13232dbed7e510c66a73b4d745a 185 SUPERFAMILY SSF54534 81 183 1.02E-23 T 12-10-2018 JDM601_2721 8edf226c37538ace2bfd607e90375f34 170 SUPERFAMILY SSF55021 8 79 2.65E-22 T 12-10-2018 JDM601_2721 8edf226c37538ace2bfd607e90375f34 170 Pfam PF10369 Small subunit of acetolactate synthase 89 162 3.5E-26 T 12-10-2018 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 JDM601_2721 8edf226c37538ace2bfd607e90375f34 170 Gene3D G3DSA:3.30.70.1150 88 167 1.4E-27 T 12-10-2018 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal JDM601_2721 8edf226c37538ace2bfd607e90375f34 170 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 6 80 6.0E-33 T 12-10-2018 JDM601_2721 8edf226c37538ace2bfd607e90375f34 170 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 7 163 4.1E-61 T 12-10-2018 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 JDM601_2721 8edf226c37538ace2bfd607e90375f34 170 Gene3D G3DSA:3.30.70.260 5 84 2.3E-35 T 12-10-2018 JDM601_2721 8edf226c37538ace2bfd607e90375f34 170 Pfam PF13710 ACT domain 16 78 7.7E-19 T 12-10-2018 JDM601_2721 8edf226c37538ace2bfd607e90375f34 170 SUPERFAMILY SSF55021 84 165 2.75E-24 T 12-10-2018 JDM601_2742 0d764c816d71a3a3880833b324d7c9d5 399 Pfam PF00266 Aminotransferase class-V 2 371 4.8E-61 T 12-10-2018 IPR000192 Aminotransferase class V domain JDM601_2742 0d764c816d71a3a3880833b324d7c9d5 399 Gene3D G3DSA:3.40.640.10 13 261 1.5E-143 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 JDM601_2742 0d764c816d71a3a3880833b324d7c9d5 399 PIRSF PIRSF005572 1 386 5.0E-111 T 12-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 JDM601_2742 0d764c816d71a3a3880833b324d7c9d5 399 Gene3D G3DSA:3.90.1150.10 3 373 1.5E-143 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 JDM601_2742 0d764c816d71a3a3880833b324d7c9d5 399 SUPERFAMILY SSF53383 1 380 3.9E-92 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase JDM601_0067 9ff413e69b6baed4818cdf07efa0ab8e 117 SUPERFAMILY SSF54593 3 114 4.97E-20 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase JDM601_0067 9ff413e69b6baed4818cdf07efa0ab8e 117 Gene3D G3DSA:3.10.180.10 1 115 5.5E-18 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase JDM601_0067 9ff413e69b6baed4818cdf07efa0ab8e 117 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 8 109 1.6E-12 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain JDM601_1834 fb707d0b7471fef1831b9340a257929b 311 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 46 65 7.6E-27 T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 JDM601_1834 fb707d0b7471fef1831b9340a257929b 311 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 260 269 7.6E-27 T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 JDM601_1834 fb707d0b7471fef1831b9340a257929b 311 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 272 295 7.6E-27 T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 JDM601_1834 fb707d0b7471fef1831b9340a257929b 311 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 128 139 7.6E-27 T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 JDM601_1834 fb707d0b7471fef1831b9340a257929b 311 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 150 305 4.9E-55 T 12-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 JDM601_1834 fb707d0b7471fef1831b9340a257929b 311 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 46 53 - T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 JDM601_1834 fb707d0b7471fef1831b9340a257929b 311 PRINTS PR00102 Ornithine carbamoyltransferase signature 77 90 1.0E-28 T 12-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 JDM601_1834 fb707d0b7471fef1831b9340a257929b 311 PRINTS PR00102 Ornithine carbamoyltransferase signature 224 234 1.0E-28 T 12-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 JDM601_1834 fb707d0b7471fef1831b9340a257929b 311 PRINTS PR00102 Ornithine carbamoyltransferase signature 44 58 1.0E-28 T 12-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 JDM601_1834 fb707d0b7471fef1831b9340a257929b 311 PRINTS PR00102 Ornithine carbamoyltransferase signature 286 297 1.0E-28 T 12-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 JDM601_1834 fb707d0b7471fef1831b9340a257929b 311 PRINTS PR00102 Ornithine carbamoyltransferase signature 117 131 1.0E-28 T 12-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 JDM601_1834 fb707d0b7471fef1831b9340a257929b 311 Gene3D G3DSA:3.40.50.1370 9 304 5.3E-121 T 12-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 JDM601_1834 fb707d0b7471fef1831b9340a257929b 311 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 3 141 4.6E-45 T 12-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 JDM601_1834 fb707d0b7471fef1831b9340a257929b 311 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 2 308 77.151 T 12-10-2018 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 JDM601_1834 fb707d0b7471fef1831b9340a257929b 311 Gene3D G3DSA:3.40.50.1370 131 294 5.3E-121 T 12-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 JDM601_1834 fb707d0b7471fef1831b9340a257929b 311 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 3 307 3.0E-115 T 12-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 JDM601_1834 fb707d0b7471fef1831b9340a257929b 311 SUPERFAMILY SSF53671 2 308 6.15E-99 T 12-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 JDM601_2305 d4cfa743c037558e6152461983f501d8 414 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 186 381 6.9E-65 T 12-10-2018 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 JDM601_2305 d4cfa743c037558e6152461983f501d8 414 Gene3D G3DSA:3.40.50.1950 1 181 3.9E-51 T 12-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 JDM601_2305 d4cfa743c037558e6152461983f501d8 414 SUPERFAMILY SSF52507 2 172 4.45E-54 T 12-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 JDM601_2305 d4cfa743c037558e6152461983f501d8 414 Gene3D G3DSA:3.40.50.10300 182 414 1.1E-89 T 12-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 JDM601_2305 d4cfa743c037558e6152461983f501d8 414 SUPERFAMILY SSF102645 185 410 1.7E-62 T 12-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 JDM601_2305 d4cfa743c037558e6152461983f501d8 414 Pfam PF02441 Flavoprotein 4 169 6.7E-38 T 12-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 JDM601_2305 d4cfa743c037558e6152461983f501d8 414 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 2 406 2.3E-112 T 12-10-2018 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|MetaCyc: PWY-7851 JDM601_3106 161ab9d00dbd6b470f86284fc7bf4f0b 145 Pfam PF13581 Histidine kinase-like ATPase domain 23 100 5.3E-7 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JDM601_3106 161ab9d00dbd6b470f86284fc7bf4f0b 145 Gene3D G3DSA:3.30.565.10 14 143 8.3E-7 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JDM601_3334 d5fd25a9fe0caf2c58015a34c3c6112f 93 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 12-10-2018 IPR020934 Ribosomal protein S19 conserved site GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JDM601_3334 d5fd25a9fe0caf2c58015a34c3c6112f 93 Pfam PF00203 Ribosomal protein S19 3 83 1.3E-36 T 12-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JDM601_3334 d5fd25a9fe0caf2c58015a34c3c6112f 93 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 3.2E-24 T 12-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JDM601_3334 d5fd25a9fe0caf2c58015a34c3c6112f 93 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 3.2E-24 T 12-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JDM601_3334 d5fd25a9fe0caf2c58015a34c3c6112f 93 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 3.2E-24 T 12-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JDM601_3334 d5fd25a9fe0caf2c58015a34c3c6112f 93 PIRSF PIRSF002144 1 93 4.2E-32 T 12-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JDM601_3334 d5fd25a9fe0caf2c58015a34c3c6112f 93 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 25.275 T 12-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JDM601_3334 d5fd25a9fe0caf2c58015a34c3c6112f 93 Gene3D G3DSA:3.30.860.10 1 93 5.1E-40 T 12-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JDM601_3334 d5fd25a9fe0caf2c58015a34c3c6112f 93 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 92 5.6E-48 T 12-10-2018 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 JDM601_3334 d5fd25a9fe0caf2c58015a34c3c6112f 93 SUPERFAMILY SSF54570 3 83 4.58E-35 T 12-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JDM601_3144 03ad19e09979b8ada5972332e463bbeb 155 SUPERFAMILY SSF81343 25 152 2.4E-30 T 12-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 JDM601_3144 03ad19e09979b8ada5972332e463bbeb 155 Gene3D G3DSA:1.20.1300.10 35 149 4.7E-22 T 12-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 JDM601_3144 03ad19e09979b8ada5972332e463bbeb 155 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 31 140 5.8E-14 T 12-10-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 JDM601_3605 825c6d55e34aaa9a5ddc4a21e1bc3776 68 Gene3D G3DSA:3.30.70.20 2 66 6.5E-19 T 12-10-2018 JDM601_3605 825c6d55e34aaa9a5ddc4a21e1bc3776 68 Pfam PF13459 4Fe-4S single cluster domain 5 63 7.1E-13 T 12-10-2018 JDM601_3605 825c6d55e34aaa9a5ddc4a21e1bc3776 68 PRINTS PR00352 3Fe-4S ferredoxin signature 18 28 8.4E-5 T 12-10-2018 IPR001080 3Fe-4S ferredoxin GO:0005506|GO:0009055 JDM601_3605 825c6d55e34aaa9a5ddc4a21e1bc3776 68 PRINTS PR00352 3Fe-4S ferredoxin signature 49 61 8.4E-5 T 12-10-2018 IPR001080 3Fe-4S ferredoxin GO:0005506|GO:0009055 JDM601_3605 825c6d55e34aaa9a5ddc4a21e1bc3776 68 PRINTS PR00352 3Fe-4S ferredoxin signature 7 18 8.4E-5 T 12-10-2018 IPR001080 3Fe-4S ferredoxin GO:0005506|GO:0009055 JDM601_3605 825c6d55e34aaa9a5ddc4a21e1bc3776 68 SUPERFAMILY SSF54862 4 64 2.22E-12 T 12-10-2018 JDM601_2687 7ec34fafaae542e2d0b86309e27575b5 730 Gene3D G3DSA:3.30.1840.10 42 358 5.7E-119 T 12-10-2018 IPR036830 Polyphosphate kinase middle domain superfamily KEGG: 00190+2.7.4.1 JDM601_2687 7ec34fafaae542e2d0b86309e27575b5 730 Pfam PF13090 Polyphosphate kinase C-terminal domain 378 724 9.6E-147 T 12-10-2018 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 JDM601_2687 7ec34fafaae542e2d0b86309e27575b5 730 Pfam PF13089 Polyphosphate kinase N-terminal domain 49 155 9.5E-37 T 12-10-2018 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 JDM601_2687 7ec34fafaae542e2d0b86309e27575b5 730 Gene3D G3DSA:3.30.870.10 549 729 2.6E-56 T 12-10-2018 JDM601_2687 7ec34fafaae542e2d0b86309e27575b5 730 Hamap MF_00347 Polyphosphate kinase [ppk]. 46 729 28.593 T 12-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 JDM601_2687 7ec34fafaae542e2d0b86309e27575b5 730 SUPERFAMILY SSF143724 152 357 6.87E-67 T 12-10-2018 JDM601_2687 7ec34fafaae542e2d0b86309e27575b5 730 SUPERFAMILY SSF140356 47 150 2.49E-36 T 12-10-2018 IPR036832 Polyphosphate kinase N-terminal domain superfamily KEGG: 00190+2.7.4.1 JDM601_2687 7ec34fafaae542e2d0b86309e27575b5 730 PIRSF PIRSF015589 28 730 1.6E-269 T 12-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 JDM601_2687 7ec34fafaae542e2d0b86309e27575b5 730 Pfam PF02503 Polyphosphate kinase middle domain 164 367 1.8E-70 T 12-10-2018 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 JDM601_2687 7ec34fafaae542e2d0b86309e27575b5 730 Gene3D G3DSA:3.30.870.10 363 548 2.8E-74 T 12-10-2018 JDM601_2687 7ec34fafaae542e2d0b86309e27575b5 730 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 48 725 8.3E-248 T 12-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 JDM601_2687 7ec34fafaae542e2d0b86309e27575b5 730 SUPERFAMILY SSF56024 369 546 1.66E-56 T 12-10-2018 JDM601_2687 7ec34fafaae542e2d0b86309e27575b5 730 SUPERFAMILY SSF56024 549 728 2.47E-59 T 12-10-2018 JDM601_2714 1e1a0332d942bc6787eb5a6ec72c7562 183 TIGRFAM TIGR02423 protocat_alph: protocatechuate 3,4-dioxygenase, alpha subunit 7 178 4.8E-56 T 12-10-2018 IPR012786 Protocatechuate 3,4-dioxygenase, alpha subunit GO:0005506|GO:0018578|GO:0019439|GO:0055114 KEGG: 00362+1.13.11.3|KEGG: 00624+1.13.11.3|MetaCyc: PWY-6041 JDM601_2714 1e1a0332d942bc6787eb5a6ec72c7562 183 Gene3D G3DSA:2.60.130.10 1 179 3.3E-57 T 12-10-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 JDM601_2714 1e1a0332d942bc6787eb5a6ec72c7562 183 SUPERFAMILY SSF49482 2 178 6.28E-44 T 12-10-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 JDM601_2714 1e1a0332d942bc6787eb5a6ec72c7562 183 Pfam PF00775 Dioxygenase 35 105 2.9E-13 T 12-10-2018 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 JDM601_1687 e11bf64582e24e06c22f772d604157bc 303 SUPERFAMILY SSF51735 6 289 1.13E-35 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_1687 e11bf64582e24e06c22f772d604157bc 303 Pfam PF01370 NAD dependent epimerase/dehydratase family 7 215 1.1E-10 T 12-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 JDM601_1687 e11bf64582e24e06c22f772d604157bc 303 Gene3D G3DSA:3.40.50.720 5 287 7.6E-72 T 12-10-2018 JDM601_1687 e11bf64582e24e06c22f772d604157bc 303 TIGRFAM TIGR01777 yfcH: TIGR01777 family protein 6 293 3.5E-96 T 12-10-2018 IPR010099 Epimerase family protein SDR39U1 JDM601_1687 e11bf64582e24e06c22f772d604157bc 303 Pfam PF08338 Domain of unknown function (DUF1731) 249 294 3.3E-17 T 12-10-2018 IPR013549 Domain of unknown function DUF1731 JDM601_3030 1bef8679c5dc494022b5c7aa1755a314 193 SUPERFAMILY SSF109854 3 117 3.66E-12 T 12-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes JDM601_3030 1bef8679c5dc494022b5c7aa1755a314 193 Pfam PF11716 Mycothiol maleylpyruvate isomerase N-terminal domain 9 84 7.8E-7 T 12-10-2018 IPR024344 Mycothiol-dependent maleylpyruvate isomerase, metal-binding domain GO:0046872 JDM601_3030 1bef8679c5dc494022b5c7aa1755a314 193 Gene3D G3DSA:1.20.120.450 1 126 2.1E-8 T 12-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes JDM601_3030 1bef8679c5dc494022b5c7aa1755a314 193 TIGRFAM TIGR03083 TIGR03083: uncharacterized Actinobacterial protein TIGR03083 8 180 1.3E-14 T 12-10-2018 IPR017517 Conserved hypothetical protein CHP03083, actinobacterial-type JDM601_0415 4db321c31027dc77a3330e999ae83220 267 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 265 1.4E-49 T 12-10-2018 JDM601_0415 4db321c31027dc77a3330e999ae83220 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 228 248 1.8E-30 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0415 4db321c31027dc77a3330e999ae83220 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 186 1.8E-30 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0415 4db321c31027dc77a3330e999ae83220 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 95 106 1.8E-30 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0415 4db321c31027dc77a3330e999ae83220 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 188 205 1.8E-30 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0415 4db321c31027dc77a3330e999ae83220 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 141 157 1.8E-30 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0415 4db321c31027dc77a3330e999ae83220 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 1.8E-30 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0415 4db321c31027dc77a3330e999ae83220 267 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 154 182 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 JDM601_0415 4db321c31027dc77a3330e999ae83220 267 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 167 186 7.8E-11 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0415 4db321c31027dc77a3330e999ae83220 267 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 95 106 7.8E-11 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0415 4db321c31027dc77a3330e999ae83220 267 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 147 155 7.8E-11 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0415 4db321c31027dc77a3330e999ae83220 267 Gene3D G3DSA:3.40.50.720 1 266 1.1E-73 T 12-10-2018 JDM601_0415 4db321c31027dc77a3330e999ae83220 267 TIGRFAM TIGR03971 SDR_subfam_1: SDR family mycofactocin-dependent oxidoreductase 5 266 4.3E-103 T 12-10-2018 IPR023985 Mycofactocin-dependent oxidoreductase JDM601_0415 4db321c31027dc77a3330e999ae83220 267 SUPERFAMILY SSF51735 7 266 4.89E-67 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_1443 1af7f880dd09a82c3f44f02bb189bd19 162 SUPERFAMILY SSF89623 4 154 1.83E-53 T 12-10-2018 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 JDM601_1443 1af7f880dd09a82c3f44f02bb189bd19 162 Pfam PF02502 Ribose/Galactose Isomerase 6 143 7.8E-46 T 12-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 JDM601_1443 1af7f880dd09a82c3f44f02bb189bd19 162 Gene3D G3DSA:3.40.1400.10 1 162 8.4E-61 T 12-10-2018 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 JDM601_1443 1af7f880dd09a82c3f44f02bb189bd19 162 TIGRFAM TIGR02133 RPI_actino: ribose 5-phosphate isomerase 4 150 1.9E-67 T 12-10-2018 IPR011860 Ribose 5-phosphate isomerase GO:0004751 JDM601_1443 1af7f880dd09a82c3f44f02bb189bd19 162 PIRSF PIRSF005384 4 152 3.1E-51 T 12-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 JDM601_1443 1af7f880dd09a82c3f44f02bb189bd19 162 TIGRFAM TIGR00689 rpiB_lacA_lacB: sugar-phosphate isomerase, RpiB/LacA/LacB family 6 150 1.7E-57 T 12-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 JDM601_2958 4a91074ba8207eef5dd00bbf8d2c87a3 325 Pfam PF00296 Luciferase-like monooxygenase 2 285 1.4E-30 T 12-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 JDM601_2958 4a91074ba8207eef5dd00bbf8d2c87a3 325 SUPERFAMILY SSF51679 2 293 2.22E-60 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 JDM601_2958 4a91074ba8207eef5dd00bbf8d2c87a3 325 TIGRFAM TIGR03558 oxido_grp_1: luciferase family oxidoreductase, group 1 2 296 5.0E-97 T 12-10-2018 IPR019949 Luciferase family oxidoreductase, group 1 JDM601_2958 4a91074ba8207eef5dd00bbf8d2c87a3 325 Gene3D G3DSA:3.20.20.30 1 303 3.8E-74 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 JDM601_1127 691495809c36426797297e7946aaaeba 127 Pfam PF02661 Fic/DOC family 6 83 6.0E-6 T 12-10-2018 IPR003812 Fido domain JDM601_1127 691495809c36426797297e7946aaaeba 127 Gene3D G3DSA:1.20.120.1870 2 126 7.5E-25 T 12-10-2018 JDM601_2793 b5515ce5ccd8a9185ac255b555c8c69a 491 Gene3D G3DSA:1.10.630.10 50 490 5.4E-105 T 12-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_2793 b5515ce5ccd8a9185ac255b555c8c69a 491 SUPERFAMILY SSF48264 54 490 9.82E-102 T 12-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_2793 b5515ce5ccd8a9185ac255b555c8c69a 491 PRINTS PR00465 E-class P450 group IV signature 293 319 1.0E-21 T 12-10-2018 IPR002403 Cytochrome P450, E-class, group IV GO:0004497|GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_2793 b5515ce5ccd8a9185ac255b555c8c69a 491 PRINTS PR00465 E-class P450 group IV signature 438 456 1.0E-21 T 12-10-2018 IPR002403 Cytochrome P450, E-class, group IV GO:0004497|GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_2793 b5515ce5ccd8a9185ac255b555c8c69a 491 PRINTS PR00465 E-class P450 group IV signature 422 438 1.0E-21 T 12-10-2018 IPR002403 Cytochrome P450, E-class, group IV GO:0004497|GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_2793 b5515ce5ccd8a9185ac255b555c8c69a 491 PRINTS PR00465 E-class P450 group IV signature 348 364 1.0E-21 T 12-10-2018 IPR002403 Cytochrome P450, E-class, group IV GO:0004497|GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_2793 b5515ce5ccd8a9185ac255b555c8c69a 491 PRINTS PR00465 E-class P450 group IV signature 381 395 1.0E-21 T 12-10-2018 IPR002403 Cytochrome P450, E-class, group IV GO:0004497|GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_2793 b5515ce5ccd8a9185ac255b555c8c69a 491 PRINTS PR00465 E-class P450 group IV signature 397 415 1.0E-21 T 12-10-2018 IPR002403 Cytochrome P450, E-class, group IV GO:0004497|GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_2793 b5515ce5ccd8a9185ac255b555c8c69a 491 PRINTS PR00465 E-class P450 group IV signature 88 105 1.0E-21 T 12-10-2018 IPR002403 Cytochrome P450, E-class, group IV GO:0004497|GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_2793 b5515ce5ccd8a9185ac255b555c8c69a 491 PRINTS PR00385 P450 superfamily signature 353 364 4.1E-6 T 12-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_2793 b5515ce5ccd8a9185ac255b555c8c69a 491 PRINTS PR00385 P450 superfamily signature 429 438 4.1E-6 T 12-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_2793 b5515ce5ccd8a9185ac255b555c8c69a 491 PRINTS PR00385 P450 superfamily signature 438 449 4.1E-6 T 12-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_2793 b5515ce5ccd8a9185ac255b555c8c69a 491 PRINTS PR00385 P450 superfamily signature 302 319 4.1E-6 T 12-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_2793 b5515ce5ccd8a9185ac255b555c8c69a 491 Pfam PF00067 Cytochrome P450 62 465 9.9E-66 T 12-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_2793 b5515ce5ccd8a9185ac255b555c8c69a 491 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 431 440 - T 12-10-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 JDM601_2737 884d411c14af8a3d3dab5a009d17b2f1 693 Hamap MF_01588 DNA ligase [ligA]. 10 682 49.885 T 12-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 JDM601_2737 884d411c14af8a3d3dab5a009d17b2f1 693 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 416 444 1.5E-6 T 12-10-2018 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 JDM601_2737 884d411c14af8a3d3dab5a009d17b2f1 693 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 19 677 7.2E-235 T 12-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 JDM601_2737 884d411c14af8a3d3dab5a009d17b2f1 693 SUPERFAMILY SSF47781 412 599 3.15E-51 T 12-10-2018 IPR010994 RuvA domain 2-like JDM601_2737 884d411c14af8a3d3dab5a009d17b2f1 693 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 330 407 6.4E-30 T 12-10-2018 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 JDM601_2737 884d411c14af8a3d3dab5a009d17b2f1 693 Gene3D G3DSA:3.30.470.90 77 326 7.5E-99 T 12-10-2018 JDM601_2737 884d411c14af8a3d3dab5a009d17b2f1 693 Gene3D G3DSA:1.10.150.20 442 520 1.6E-12 T 12-10-2018 JDM601_2737 884d411c14af8a3d3dab5a009d17b2f1 693 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 610 681 6.6E-12 T 12-10-2018 IPR001357 BRCT domain JDM601_2737 884d411c14af8a3d3dab5a009d17b2f1 693 PIRSF PIRSF001604 4 686 4.3E-225 T 12-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 JDM601_2737 884d411c14af8a3d3dab5a009d17b2f1 693 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 12 327 1.7E-116 T 12-10-2018 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 JDM601_2737 884d411c14af8a3d3dab5a009d17b2f1 693 Gene3D G3DSA:1.10.287.610 1 76 1.5E-27 T 12-10-2018 JDM601_2737 884d411c14af8a3d3dab5a009d17b2f1 693 SMART SM00292 608 685 4.5E-13 T 12-10-2018 IPR001357 BRCT domain JDM601_2737 884d411c14af8a3d3dab5a009d17b2f1 693 Gene3D G3DSA:2.40.50.140 327 398 4.5E-27 T 12-10-2018 JDM601_2737 884d411c14af8a3d3dab5a009d17b2f1 693 SMART SM00532 11 458 1.1E-246 T 12-10-2018 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 JDM601_2737 884d411c14af8a3d3dab5a009d17b2f1 693 SUPERFAMILY SSF56091 11 325 2.47E-108 T 12-10-2018 JDM601_2737 884d411c14af8a3d3dab5a009d17b2f1 693 Gene3D G3DSA:3.40.50.10190 606 687 1.4E-23 T 12-10-2018 IPR036420 BRCT domain superfamily JDM601_2737 884d411c14af8a3d3dab5a009d17b2f1 693 Gene3D G3DSA:1.10.150.20 521 601 2.1E-28 T 12-10-2018 JDM601_2737 884d411c14af8a3d3dab5a009d17b2f1 693 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 122 151 - T 12-10-2018 IPR018239 NAD-dependent DNA ligase, active site JDM601_2737 884d411c14af8a3d3dab5a009d17b2f1 693 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 340 355 - T 12-10-2018 IPR033136 NAD-dependent DNA ligase, conserved site JDM601_2737 884d411c14af8a3d3dab5a009d17b2f1 693 Gene3D G3DSA:2.20.70.80 400 439 1.9E-5 T 12-10-2018 JDM601_2737 884d411c14af8a3d3dab5a009d17b2f1 693 SUPERFAMILY SSF52113 611 685 4.09E-17 T 12-10-2018 IPR036420 BRCT domain superfamily JDM601_2737 884d411c14af8a3d3dab5a009d17b2f1 693 SUPERFAMILY SSF50249 326 409 1.03E-25 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold JDM601_2737 884d411c14af8a3d3dab5a009d17b2f1 693 Pfam PF12826 Helix-hairpin-helix motif 526 589 2.1E-22 T 12-10-2018 JDM601_1430 98b2e011ddb3e8ddb31ea4a05acbcaf5 154 Pfam PF00436 Single-strand binding protein family 6 103 3.1E-15 T 12-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 JDM601_1430 98b2e011ddb3e8ddb31ea4a05acbcaf5 154 Gene3D G3DSA:2.40.50.140 2 116 3.3E-39 T 12-10-2018 JDM601_1430 98b2e011ddb3e8ddb31ea4a05acbcaf5 154 SUPERFAMILY SSF50249 7 144 1.3E-23 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold JDM601_3512 15aeafa1d4d34bec7a30d11d90fd16a9 356 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 13 76 3.1E-6 T 12-10-2018 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 JDM601_3512 15aeafa1d4d34bec7a30d11d90fd16a9 356 Gene3D G3DSA:3.40.50.720 7 163 5.2E-19 T 12-10-2018 JDM601_3512 15aeafa1d4d34bec7a30d11d90fd16a9 356 SUPERFAMILY SSF51735 7 144 3.33E-13 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_4263 cefbca4dbd037b46e6ccd6e3db6faabc 383 Gene3D G3DSA:1.20.140.10 245 383 2.0E-9 T 12-10-2018 JDM601_4263 cefbca4dbd037b46e6ccd6e3db6faabc 383 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 134 146 - T 12-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 JDM601_4263 cefbca4dbd037b46e6ccd6e3db6faabc 383 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 284 380 2.4E-5 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 JDM601_4263 cefbca4dbd037b46e6ccd6e3db6faabc 383 Gene3D G3DSA:1.10.540.10 4 129 1.5E-27 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 JDM601_4263 cefbca4dbd037b46e6ccd6e3db6faabc 383 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 133 225 3.0E-19 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 JDM601_4263 cefbca4dbd037b46e6ccd6e3db6faabc 383 SUPERFAMILY SSF56645 17 250 6.28E-62 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 JDM601_4263 cefbca4dbd037b46e6ccd6e3db6faabc 383 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 18 128 1.9E-23 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 JDM601_4263 cefbca4dbd037b46e6ccd6e3db6faabc 383 Gene3D G3DSA:2.40.110.10 132 244 1.1E-31 T 12-10-2018 JDM601_4263 cefbca4dbd037b46e6ccd6e3db6faabc 383 SUPERFAMILY SSF47203 240 379 4.38E-5 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 JDM601_2668 4eddc7c73f96e90215e61b8599612a14 159 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 2 157 33.194 T 12-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 JDM601_2668 4eddc7c73f96e90215e61b8599612a14 159 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 4 155 3.4E-59 T 12-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 JDM601_2668 4eddc7c73f96e90215e61b8599612a14 159 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 4 63 9.8E-19 T 12-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 JDM601_2668 4eddc7c73f96e90215e61b8599612a14 159 SUPERFAMILY SSF52374 4 154 4.56E-44 T 12-10-2018 JDM601_2668 4eddc7c73f96e90215e61b8599612a14 159 Gene3D G3DSA:3.40.50.620 1 158 4.1E-55 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JDM601_2668 4eddc7c73f96e90215e61b8599612a14 159 Pfam PF01467 Cytidylyltransferase-like 6 131 6.2E-22 T 12-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 JDM601_2668 4eddc7c73f96e90215e61b8599612a14 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 20 41 1.2E-51 T 12-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 JDM601_2668 4eddc7c73f96e90215e61b8599612a14 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 85 101 1.2E-51 T 12-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 JDM601_2668 4eddc7c73f96e90215e61b8599612a14 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 2 20 1.2E-51 T 12-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 JDM601_2668 4eddc7c73f96e90215e61b8599612a14 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 111 133 1.2E-51 T 12-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 JDM601_2668 4eddc7c73f96e90215e61b8599612a14 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 49 73 1.2E-51 T 12-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 JDM601_2668 4eddc7c73f96e90215e61b8599612a14 159 ProDom PD016147 LIGASE LYASE CITRATE PRO-3S-LYASE SYNTHETASE TRANSFERASE CYTIDYLTRANSFERASE-RELATED:CITRATE ACETATE:SH-CITRATE CITC PLASMID 11 76 7.0E-4 T 12-10-2018 JDM601_3569 dbac4e4251b5a000059c31de7393ef18 767 SUPERFAMILY SSF56042 218 451 1.39E-52 T 12-10-2018 IPR036676 PurM-like, C-terminal domain superfamily JDM601_3569 dbac4e4251b5a000059c31de7393ef18 767 SUPERFAMILY SSF55326 25 211 1.18E-49 T 12-10-2018 IPR036921 PurM-like, N-terminal domain superfamily JDM601_3569 dbac4e4251b5a000059c31de7393ef18 767 SUPERFAMILY SSF56042 598 765 4.64E-37 T 12-10-2018 IPR036676 PurM-like, C-terminal domain superfamily JDM601_3569 dbac4e4251b5a000059c31de7393ef18 767 SUPERFAMILY SSF55326 420 591 1.14E-53 T 12-10-2018 IPR036921 PurM-like, N-terminal domain superfamily JDM601_3569 dbac4e4251b5a000059c31de7393ef18 767 Pfam PF02769 AIR synthase related protein, C-terminal domain 598 736 2.3E-22 T 12-10-2018 IPR010918 PurM-like, C-terminal domain JDM601_3569 dbac4e4251b5a000059c31de7393ef18 767 Pfam PF02769 AIR synthase related protein, C-terminal domain 219 378 2.6E-33 T 12-10-2018 IPR010918 PurM-like, C-terminal domain JDM601_3569 dbac4e4251b5a000059c31de7393ef18 767 PIRSF PIRSF001587 12 767 4.8E-280 T 12-10-2018 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 JDM601_3569 dbac4e4251b5a000059c31de7393ef18 767 Gene3D G3DSA:3.30.1330.10 56 210 7.3E-129 T 12-10-2018 IPR036921 PurM-like, N-terminal domain superfamily JDM601_3569 dbac4e4251b5a000059c31de7393ef18 767 Hamap MF_00420 Phosphoribosylformylglycinamidine synthase subunit PurL [purL]. 1 767 306.679 T 12-10-2018 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 JDM601_3569 dbac4e4251b5a000059c31de7393ef18 767 Gene3D G3DSA:3.90.650.10 42 387 7.3E-129 T 12-10-2018 IPR036676 PurM-like, C-terminal domain superfamily JDM601_3569 dbac4e4251b5a000059c31de7393ef18 767 TIGRFAM TIGR01736 FGAM_synth_II: phosphoribosylformylglycinamidine synthase II 30 763 2.5E-253 T 12-10-2018 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 JDM601_3569 dbac4e4251b5a000059c31de7393ef18 767 Pfam PF00586 AIR synthase related protein, N-terminal domain 480 584 3.9E-23 T 12-10-2018 IPR016188 PurM-like, N-terminal domain JDM601_3569 dbac4e4251b5a000059c31de7393ef18 767 Pfam PF00586 AIR synthase related protein, N-terminal domain 104 205 3.3E-24 T 12-10-2018 IPR016188 PurM-like, N-terminal domain JDM601_3569 dbac4e4251b5a000059c31de7393ef18 767 Gene3D G3DSA:3.90.650.10 597 764 3.3E-37 T 12-10-2018 IPR036676 PurM-like, C-terminal domain superfamily JDM601_3569 dbac4e4251b5a000059c31de7393ef18 767 Gene3D G3DSA:3.30.1330.10 409 587 5.0E-57 T 12-10-2018 IPR036921 PurM-like, N-terminal domain superfamily JDM601_0367 58238522d71b05ec322db785a649dac5 421 SUPERFAMILY SSF56059 131 411 7.95E-39 T 12-10-2018 JDM601_0367 58238522d71b05ec322db785a649dac5 421 Gene3D G3DSA:3.30.470.20 210 419 7.9E-37 T 12-10-2018 JDM601_0367 58238522d71b05ec322db785a649dac5 421 SUPERFAMILY SSF52440 20 118 4.32E-18 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily JDM601_0367 58238522d71b05ec322db785a649dac5 421 Pfam PF02222 ATP-grasp domain 135 315 2.1E-25 T 12-10-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type JDM601_0367 58238522d71b05ec322db785a649dac5 421 Gene3D G3DSA:3.40.50.20 16 134 2.7E-32 T 12-10-2018 JDM601_0367 58238522d71b05ec322db785a649dac5 421 Gene3D G3DSA:3.30.1490.20 135 209 3.9E-21 T 12-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 JDM601_4227 afd8714fe85c1611a8e736b2642104ac 334 SUPERFAMILY SSF54637 14 146 1.41E-25 T 12-10-2018 IPR029069 HotDog domain superfamily JDM601_4227 afd8714fe85c1611a8e736b2642104ac 334 Gene3D G3DSA:3.10.129.10 2 146 5.4E-36 T 12-10-2018 JDM601_4227 afd8714fe85c1611a8e736b2642104ac 334 Pfam PF13452 N-terminal half of MaoC dehydratase 5 132 2.3E-28 T 12-10-2018 IPR039569 N-terminal of MaoC-like dehydratase Reactome: R-HSA-193368|Reactome: R-HSA-2046106|Reactome: R-HSA-389887|Reactome: R-HSA-390247|Reactome: R-HSA-9033241|Reactome: R-HSA-9033500 JDM601_4227 afd8714fe85c1611a8e736b2642104ac 334 SUPERFAMILY SSF54637 195 308 1.54E-21 T 12-10-2018 IPR029069 HotDog domain superfamily JDM601_4227 afd8714fe85c1611a8e736b2642104ac 334 Pfam PF01575 MaoC like domain 212 299 2.6E-18 T 12-10-2018 IPR002539 MaoC-like dehydratase domain JDM601_4227 afd8714fe85c1611a8e736b2642104ac 334 Gene3D G3DSA:3.10.129.10 193 334 1.1E-37 T 12-10-2018 JDM601_4147 aa07fd75e382f1065379bc75ebb7f726 229 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 5 202 1.1E-37 T 12-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 JDM601_4147 aa07fd75e382f1065379bc75ebb7f726 229 SMART SM00855 4 163 2.1E-18 T 12-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 JDM601_4147 aa07fd75e382f1065379bc75ebb7f726 229 SUPERFAMILY SSF53254 2 205 1.85E-41 T 12-10-2018 IPR029033 Histidine phosphatase superfamily JDM601_4147 aa07fd75e382f1065379bc75ebb7f726 229 Gene3D G3DSA:3.40.50.1240 1 206 3.0E-33 T 12-10-2018 IPR029033 Histidine phosphatase superfamily JDM601_4147 aa07fd75e382f1065379bc75ebb7f726 229 PIRSF PIRSF000709 2 174 2.7E-4 T 12-10-2018 JDM601_0422 1351e640cea2e15552596116ac106e78 405 Gene3D G3DSA:2.40.340.10 332 398 2.4E-117 T 12-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 JDM601_0422 1351e640cea2e15552596116ac106e78 405 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 177 317 2.5E-29 T 12-10-2018 IPR001453 MoaB/Mog domain JDM601_0422 1351e640cea2e15552596116ac106e78 405 Gene3D G3DSA:3.40.980.10 174 331 2.4E-117 T 12-10-2018 IPR036425 MoaB/Mog-like domain superfamily JDM601_0422 1351e640cea2e15552596116ac106e78 405 Pfam PF03454 MoeA C-terminal region (domain IV) 335 403 8.9E-15 T 12-10-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 JDM601_0422 1351e640cea2e15552596116ac106e78 405 SMART SM00852 179 321 9.6E-38 T 12-10-2018 IPR001453 MoaB/Mog domain JDM601_0422 1351e640cea2e15552596116ac106e78 405 Pfam PF00994 Probable molybdopterin binding domain 180 321 4.0E-25 T 12-10-2018 IPR001453 MoaB/Mog domain JDM601_0422 1351e640cea2e15552596116ac106e78 405 SUPERFAMILY SSF63867 330 403 2.22E-15 T 12-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 JDM601_0422 1351e640cea2e15552596116ac106e78 405 SUPERFAMILY SSF63882 1 175 2.09E-49 T 12-10-2018 IPR036135 MoeA, N-terminal and linker domain superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 JDM601_0422 1351e640cea2e15552596116ac106e78 405 Gene3D G3DSA:2.170.190.11 44 140 2.4E-117 T 12-10-2018 JDM601_0422 1351e640cea2e15552596116ac106e78 405 Pfam PF03453 MoeA N-terminal region (domain I and II) 3 166 3.7E-41 T 12-10-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 JDM601_0422 1351e640cea2e15552596116ac106e78 405 SUPERFAMILY SSF53218 177 326 2.22E-36 T 12-10-2018 IPR036425 MoaB/Mog-like domain superfamily JDM601_0422 1351e640cea2e15552596116ac106e78 405 Gene3D G3DSA:3.90.105.10 22 173 2.4E-117 T 12-10-2018 JDM601_2195 1d84bd353396ae9ebadfddf5ce38a074 498 Gene3D G3DSA:3.50.50.60 1 257 1.5E-66 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_2195 1d84bd353396ae9ebadfddf5ce38a074 498 SUPERFAMILY SSF51905 285 452 2.37E-13 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_2195 1d84bd353396ae9ebadfddf5ce38a074 498 Pfam PF13738 Pyridine nucleotide-disulphide oxidoreductase 12 217 1.2E-15 T 12-10-2018 JDM601_2195 1d84bd353396ae9ebadfddf5ce38a074 498 SUPERFAMILY SSF51905 7 236 5.08E-53 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_2195 1d84bd353396ae9ebadfddf5ce38a074 498 Gene3D G3DSA:3.50.50.60 315 487 8.7E-24 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_2195 1d84bd353396ae9ebadfddf5ce38a074 498 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 176 201 1.5E-7 T 12-10-2018 JDM601_2195 1d84bd353396ae9ebadfddf5ce38a074 498 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 10 32 1.5E-7 T 12-10-2018 JDM601_2195 1d84bd353396ae9ebadfddf5ce38a074 498 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 135 144 1.5E-7 T 12-10-2018 JDM601_2195 1d84bd353396ae9ebadfddf5ce38a074 498 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 11 30 6.8E-5 T 12-10-2018 JDM601_2195 1d84bd353396ae9ebadfddf5ce38a074 498 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 176 194 6.8E-5 T 12-10-2018 JDM601_2496 2532691c74f53b1e77a465713a64c258 146 Pfam PF00583 Acetyltransferase (GNAT) family 21 99 1.3E-11 T 12-10-2018 IPR000182 GNAT domain JDM601_2496 2532691c74f53b1e77a465713a64c258 146 SUPERFAMILY SSF55729 22 103 1.29E-19 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase JDM601_2496 2532691c74f53b1e77a465713a64c258 146 Gene3D G3DSA:3.40.630.30 2 123 6.4E-25 T 12-10-2018 JDM601_3767 a02c8f43bad80a59b1377078a084537a 358 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 101 192 7.0E-20 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 JDM601_3767 a02c8f43bad80a59b1377078a084537a 358 SUPERFAMILY SSF56645 14 216 3.53E-46 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 JDM601_3767 a02c8f43bad80a59b1377078a084537a 358 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 209 352 1.5E-16 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 JDM601_3767 a02c8f43bad80a59b1377078a084537a 358 SUPERFAMILY SSF47203 205 356 7.25E-19 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 JDM601_3767 a02c8f43bad80a59b1377078a084537a 358 Gene3D G3DSA:2.40.110.10 99 208 2.4E-32 T 12-10-2018 JDM601_3767 a02c8f43bad80a59b1377078a084537a 358 Gene3D G3DSA:1.10.540.10 1 96 7.0E-7 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 JDM601_3767 a02c8f43bad80a59b1377078a084537a 358 Gene3D G3DSA:1.20.140.10 209 358 2.2E-28 T 12-10-2018 JDM601_2821 394510dd55d04ed8ae956c2022ad5fc8 458 SUPERFAMILY SSF53300 3 183 1.53E-25 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily JDM601_2821 394510dd55d04ed8ae956c2022ad5fc8 458 SMART SM00327 2 185 9.0E-17 T 12-10-2018 IPR002035 von Willebrand factor, type A JDM601_2821 394510dd55d04ed8ae956c2022ad5fc8 458 Gene3D G3DSA:3.40.50.410 1 195 2.1E-35 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily JDM601_2821 394510dd55d04ed8ae956c2022ad5fc8 458 Pfam PF00092 von Willebrand factor type A domain 4 180 1.0E-12 T 12-10-2018 IPR002035 von Willebrand factor, type A JDM601_0516 68a5ea24087e92fd4ec9a29dd4d734ae 461 Gene3D G3DSA:1.20.1260.20 1 174 7.1E-62 T 12-10-2018 IPR038332 PPE superfamily JDM601_0516 68a5ea24087e92fd4ec9a29dd4d734ae 461 SUPERFAMILY SSF140459 2 173 1.39E-58 T 12-10-2018 JDM601_0516 68a5ea24087e92fd4ec9a29dd4d734ae 461 Pfam PF00823 PPE family 5 161 8.6E-57 T 12-10-2018 IPR000030 PPE family JDM601_0516 68a5ea24087e92fd4ec9a29dd4d734ae 461 Pfam PF09851 Short C-terminal domain 433 459 1.8E-6 T 12-10-2018 IPR018649 SHOCT domain JDM601_0516 68a5ea24087e92fd4ec9a29dd4d734ae 461 Pfam PF12484 Polymorphic PE/PPE proteins C terminal 318 391 2.4E-7 T 12-10-2018 IPR022171 PPE family, C-terminal JDM601_3360 2024db3ee77e4f5fd145482408244d90 549 Pfam PF13193 AMP-binding enzyme C-terminal domain 461 536 1.3E-15 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain JDM601_3360 2024db3ee77e4f5fd145482408244d90 549 Pfam PF00501 AMP-binding enzyme 16 451 3.0E-46 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 JDM601_3360 2024db3ee77e4f5fd145482408244d90 549 Gene3D G3DSA:3.40.50.12780 3 445 5.7E-66 T 12-10-2018 JDM601_3360 2024db3ee77e4f5fd145482408244d90 549 SUPERFAMILY SSF56801 6 548 6.8E-99 T 12-10-2018 JDM601_3360 2024db3ee77e4f5fd145482408244d90 549 ProSitePatterns PS00455 Putative AMP-binding domain signature. 185 196 - T 12-10-2018 IPR020845 AMP-binding, conserved site JDM601_3360 2024db3ee77e4f5fd145482408244d90 549 Gene3D G3DSA:3.30.300.30 448 549 1.3E-23 T 12-10-2018 JDM601_0198 9a5cdbf21c60df8d088e84447a6c1225 504 Pfam PF02720 Domain of unknown function (DUF222) 31 369 3.2E-50 T 12-10-2018 IPR003870 Domain of unknown function DUF222 JDM601_0198 9a5cdbf21c60df8d088e84447a6c1225 504 SMART SM00507 360 412 1.1E-6 T 12-10-2018 IPR003615 HNH nuclease JDM601_1365 e13d360ea311c491533a81cc30fe562f 185 Gene3D G3DSA:3.40.470.10 1 179 6.5E-38 T 12-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 JDM601_1365 e13d360ea311c491533a81cc30fe562f 185 SUPERFAMILY SSF52141 13 171 8.18E-31 T 12-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 JDM601_1365 e13d360ea311c491533a81cc30fe562f 185 Pfam PF03167 Uracil DNA glycosylase superfamily 15 173 4.7E-31 T 12-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 JDM601_1365 e13d360ea311c491533a81cc30fe562f 185 SMART SM00987 15 174 6.7E-14 T 12-10-2018 JDM601_1365 e13d360ea311c491533a81cc30fe562f 185 SMART SM00986 15 174 6.7E-14 T 12-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 JDM601_1992 40d7867deb56752c3dd003e6bd413092 220 SUPERFAMILY SSF55166 40 208 1.37E-49 T 12-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 JDM601_1992 40d7867deb56752c3dd003e6bd413092 220 Gene3D G3DSA:3.30.1380.10 39 211 1.1E-43 T 12-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 JDM601_1992 40d7867deb56752c3dd003e6bd413092 220 Pfam PF01427 D-ala-D-ala dipeptidase 39 219 9.3E-54 T 12-10-2018 IPR000755 D-alanyl-D-alanine dipeptidase GO:0005618|GO:0006508|GO:0008237|GO:0016805 MetaCyc: PWY-6454|MetaCyc: PWY-6455 JDM601_1992 40d7867deb56752c3dd003e6bd413092 220 PIRSF PIRSF026671 9 212 3.2E-52 T 12-10-2018 IPR000755 D-alanyl-D-alanine dipeptidase GO:0005618|GO:0006508|GO:0008237|GO:0016805 MetaCyc: PWY-6454|MetaCyc: PWY-6455 JDM601_1992 40d7867deb56752c3dd003e6bd413092 220 Hamap MF_01924 D-alanyl-D-alanine dipeptidase [ddpX]. 41 218 25.98 T 12-10-2018 IPR000755 D-alanyl-D-alanine dipeptidase GO:0005618|GO:0006508|GO:0008237|GO:0016805 MetaCyc: PWY-6454|MetaCyc: PWY-6455 JDM601_2271 3bb8d4d9312012635b540a0dbc0a10d7 246 SUPERFAMILY SSF100950 3 243 9.57E-67 T 12-10-2018 IPR037171 NagB/RpiA transferase-like JDM601_2271 3bb8d4d9312012635b540a0dbc0a10d7 246 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 9 233 3.8E-71 T 12-10-2018 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 JDM601_2271 3bb8d4d9312012635b540a0dbc0a10d7 246 TIGRFAM TIGR01198 pgl: 6-phosphogluconolactonase 6 242 7.5E-75 T 12-10-2018 IPR005900 6-phosphogluconolactonase, DevB-type GO:0005975|GO:0006098|GO:0017057 KEGG: 00030+3.1.1.31 JDM601_2271 3bb8d4d9312012635b540a0dbc0a10d7 246 Gene3D G3DSA:3.40.50.1360 1 245 6.0E-94 T 12-10-2018 JDM601_0343 76f7c7c5a176168d48d59081545d52d1 389 SUPERFAMILY SSF52343 244 385 4.71E-24 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain JDM601_0343 76f7c7c5a176168d48d59081545d52d1 389 Gene3D G3DSA:1.10.490.10 6 136 5.4E-20 T 12-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 JDM601_0343 76f7c7c5a176168d48d59081545d52d1 389 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 174 184 2.0E-5 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 JDM601_0343 76f7c7c5a176168d48d59081545d52d1 389 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 276 285 2.0E-5 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 JDM601_0343 76f7c7c5a176168d48d59081545d52d1 389 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 251 270 2.0E-5 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 JDM601_0343 76f7c7c5a176168d48d59081545d52d1 389 Pfam PF00175 Oxidoreductase NAD-binding domain 252 368 7.7E-7 T 12-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 JDM601_0343 76f7c7c5a176168d48d59081545d52d1 389 PRINTS PR00410 Phenol hydroxylase reductase family signature 174 186 2.4E-11 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 JDM601_0343 76f7c7c5a176168d48d59081545d52d1 389 PRINTS PR00410 Phenol hydroxylase reductase family signature 251 270 2.4E-11 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 JDM601_0343 76f7c7c5a176168d48d59081545d52d1 389 PRINTS PR00410 Phenol hydroxylase reductase family signature 276 285 2.4E-11 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 JDM601_0343 76f7c7c5a176168d48d59081545d52d1 389 Gene3D G3DSA:2.40.30.10 142 239 1.0E-19 T 12-10-2018 JDM601_0343 76f7c7c5a176168d48d59081545d52d1 389 Pfam PF00970 Oxidoreductase FAD-binding domain 150 241 2.8E-15 T 12-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 JDM601_0343 76f7c7c5a176168d48d59081545d52d1 389 SUPERFAMILY SSF46458 9 138 8.34E-23 T 12-10-2018 IPR009050 Globin-like superfamily JDM601_0343 76f7c7c5a176168d48d59081545d52d1 389 Gene3D G3DSA:3.40.50.80 246 387 4.1E-21 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain JDM601_0343 76f7c7c5a176168d48d59081545d52d1 389 Pfam PF00042 Globin 18 103 2.4E-6 T 12-10-2018 IPR000971 Globin GO:0020037 JDM601_0343 76f7c7c5a176168d48d59081545d52d1 389 SUPERFAMILY SSF63380 146 241 1.04E-21 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel JDM601_0541 21a4102abdb54eda6b98bc7ebc1d14b0 300 Pfam PF00378 Enoyl-CoA hydratase/isomerase 34 294 3.7E-52 T 12-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 JDM601_0541 21a4102abdb54eda6b98bc7ebc1d14b0 300 SUPERFAMILY SSF52096 19 296 1.77E-76 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily JDM601_0541 21a4102abdb54eda6b98bc7ebc1d14b0 300 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 137 157 - T 12-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 JDM601_0541 21a4102abdb54eda6b98bc7ebc1d14b0 300 Hamap MF_01934 1,4-dihydroxy-2-naphthoyl-CoA synthase [menB]. 11 299 52.723 T 12-10-2018 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837 JDM601_0541 21a4102abdb54eda6b98bc7ebc1d14b0 300 TIGRFAM TIGR01929 menB: naphthoate synthase 20 296 3.9E-136 T 12-10-2018 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837 JDM601_0541 21a4102abdb54eda6b98bc7ebc1d14b0 300 Gene3D G3DSA:1.10.12.10 240 288 3.4E-27 T 12-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal JDM601_0541 21a4102abdb54eda6b98bc7ebc1d14b0 300 Gene3D G3DSA:3.90.226.10 3 239 7.6E-95 T 12-10-2018 JDM601_3848 1fbb2f84c0126d0def6d9bbcaa87fbba 137 Pfam PF01796 DUF35 OB-fold domain, acyl-CoA-associated 59 122 2.3E-17 T 12-10-2018 IPR002878 Domain of unknown function DUF35, OB-fold, C-terminal JDM601_3848 1fbb2f84c0126d0def6d9bbcaa87fbba 137 SUPERFAMILY SSF50249 5 128 1.01E-32 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold JDM601_3848 1fbb2f84c0126d0def6d9bbcaa87fbba 137 Pfam PF12172 Rubredoxin-like zinc ribbon domain (DUF35_N) 20 55 1.7E-11 T 12-10-2018 IPR022002 Domain of unknown function DUF35, rubredoxin-like zinc ribbon domain, N-terminal JDM601_1616 91bddcd96097864aec19af626f6c1e37 362 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 14 77 2.1E-6 T 12-10-2018 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 JDM601_1616 91bddcd96097864aec19af626f6c1e37 362 Gene3D G3DSA:3.40.50.720 3 174 7.0E-15 T 12-10-2018 JDM601_1616 91bddcd96097864aec19af626f6c1e37 362 SUPERFAMILY SSF51735 7 154 4.24E-14 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_0644 5cae9961707d8973fc44e102ad0c3a90 1101 SUPERFAMILY SSF52540 6 326 9.56E-72 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_0644 5cae9961707d8973fc44e102ad0c3a90 1101 PIRSF PIRSF000980 6 1088 4.7E-297 T 12-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 JDM601_0644 5cae9961707d8973fc44e102ad0c3a90 1101 Gene3D G3DSA:1.10.10.160 92 197 2.2E-45 T 12-10-2018 IPR013986 DExx box DNA helicase domain superfamily JDM601_0644 5cae9961707d8973fc44e102ad0c3a90 1101 SUPERFAMILY SSF52980 793 1097 5.31E-63 T 12-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 JDM601_0644 5cae9961707d8973fc44e102ad0c3a90 1101 SUPERFAMILY SSF52540 331 762 1.21E-72 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_0644 5cae9961707d8973fc44e102ad0c3a90 1101 TIGRFAM TIGR01450 recC: exodeoxyribonuclease V, gamma subunit 7 1050 0.0 T 12-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 JDM601_0644 5cae9961707d8973fc44e102ad0c3a90 1101 Gene3D G3DSA:3.40.50.300 317 760 7.9E-124 T 12-10-2018 JDM601_0644 5cae9961707d8973fc44e102ad0c3a90 1101 Pfam PF04257 Exodeoxyribonuclease V, gamma subunit 7 757 4.9E-196 T 12-10-2018 JDM601_0644 5cae9961707d8973fc44e102ad0c3a90 1101 Hamap MF_01486 RecBCD enzyme subunit RecC [recC]. 6 1101 15.82 T 12-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 JDM601_0644 5cae9961707d8973fc44e102ad0c3a90 1101 Gene3D G3DSA:3.40.50.10930 9 259 2.2E-45 T 12-10-2018 JDM601_0644 5cae9961707d8973fc44e102ad0c3a90 1101 Gene3D G3DSA:1.10.486.10 432 640 7.9E-124 T 12-10-2018 JDM601_2739 edb5b6b9045fff5ba133e15f48f326ae 334 Gene3D G3DSA:3.20.20.210 70 328 4.5E-24 T 12-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 JDM601_2739 edb5b6b9045fff5ba133e15f48f326ae 334 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 6 324 5.3E-50 T 12-10-2018 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 JDM601_2739 edb5b6b9045fff5ba133e15f48f326ae 334 SUPERFAMILY SSF51726 85 315 1.96E-26 T 12-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 JDM601_3757 2257469b4da8c53219f5242bd09eaf5b 236 Gene3D G3DSA:1.20.120.530 71 228 2.1E-27 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal JDM601_3757 2257469b4da8c53219f5242bd09eaf5b 236 SUPERFAMILY SSF46785 2 67 3.45E-15 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JDM601_3757 2257469b4da8c53219f5242bd09eaf5b 236 Pfam PF07729 FCD domain 88 216 4.0E-19 T 12-10-2018 IPR011711 GntR, C-terminal JDM601_3757 2257469b4da8c53219f5242bd09eaf5b 236 SMART SM00345 2 63 5.5E-13 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 JDM601_3757 2257469b4da8c53219f5242bd09eaf5b 236 SMART SM00895 88 217 2.1E-18 T 12-10-2018 IPR011711 GntR, C-terminal JDM601_3757 2257469b4da8c53219f5242bd09eaf5b 236 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 21 35 2.6E-7 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 JDM601_3757 2257469b4da8c53219f5242bd09eaf5b 236 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 35 51 2.6E-7 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 JDM601_3757 2257469b4da8c53219f5242bd09eaf5b 236 Gene3D G3DSA:1.10.10.10 1 65 1.7E-17 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JDM601_3757 2257469b4da8c53219f5242bd09eaf5b 236 SUPERFAMILY SSF48008 86 223 1.18E-19 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal JDM601_3757 2257469b4da8c53219f5242bd09eaf5b 236 Pfam PF00392 Bacterial regulatory proteins, gntR family 2 57 4.7E-16 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 JDM601_3671 0512a980bb1f7ce9b65756ed5e58e105 262 Gene3D G3DSA:3.40.50.720 1 262 1.4E-73 T 12-10-2018 JDM601_3671 0512a980bb1f7ce9b65756ed5e58e105 262 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 85 96 6.1E-8 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3671 0512a980bb1f7ce9b65756ed5e58e105 262 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 6.1E-8 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3671 0512a980bb1f7ce9b65756ed5e58e105 262 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 6.1E-8 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3671 0512a980bb1f7ce9b65756ed5e58e105 262 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 258 7.2E-54 T 12-10-2018 JDM601_3671 0512a980bb1f7ce9b65756ed5e58e105 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 2.0E-29 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3671 0512a980bb1f7ce9b65756ed5e58e105 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 2.0E-29 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3671 0512a980bb1f7ce9b65756ed5e58e105 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 2.0E-29 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3671 0512a980bb1f7ce9b65756ed5e58e105 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 223 243 2.0E-29 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3671 0512a980bb1f7ce9b65756ed5e58e105 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 2.0E-29 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3671 0512a980bb1f7ce9b65756ed5e58e105 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 85 96 2.0E-29 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3671 0512a980bb1f7ce9b65756ed5e58e105 262 SUPERFAMILY SSF51735 8 259 1.9E-70 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_3524 a17f550289f68a336f209f48c0b640d1 291 SUPERFAMILY SSF51735 17 264 6.46E-67 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_3524 a17f550289f68a336f209f48c0b640d1 291 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 159 187 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 JDM601_3524 a17f550289f68a336f209f48c0b640d1 291 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 25 263 1.2E-54 T 12-10-2018 JDM601_3524 a17f550289f68a336f209f48c0b640d1 291 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 172 191 1.4E-7 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3524 a17f550289f68a336f209f48c0b640d1 291 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 95 106 1.4E-7 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3524 a17f550289f68a336f209f48c0b640d1 291 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 160 1.4E-7 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3524 a17f550289f68a336f209f48c0b640d1 291 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 95 106 3.5E-31 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3524 a17f550289f68a336f209f48c0b640d1 291 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 146 162 3.5E-31 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3524 a17f550289f68a336f209f48c0b640d1 291 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 21 38 3.5E-31 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3524 a17f550289f68a336f209f48c0b640d1 291 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 191 3.5E-31 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3524 a17f550289f68a336f209f48c0b640d1 291 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 193 210 3.5E-31 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3524 a17f550289f68a336f209f48c0b640d1 291 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 226 246 3.5E-31 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3524 a17f550289f68a336f209f48c0b640d1 291 Gene3D G3DSA:3.40.50.720 10 284 1.8E-66 T 12-10-2018 JDM601_3135 89cbbd3bb5bfe74ed7cab533ee61b794 456 SUPERFAMILY SSF53474 53 188 7.66E-6 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_3135 89cbbd3bb5bfe74ed7cab533ee61b794 456 Gene3D G3DSA:3.40.50.1820 61 230 1.6E-7 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_3135 89cbbd3bb5bfe74ed7cab533ee61b794 456 Pfam PF08237 PE-PPE domain 76 311 1.6E-49 T 12-10-2018 IPR013228 PE-PPE, C-terminal JDM601_0089 dbe6dec1aa789c44368872c716fd345e 131 Pfam PF04248 Domain of unknown function (DUF427) 29 122 1.2E-31 T 12-10-2018 IPR007361 Domain of unknown function DUF427 JDM601_0089 dbe6dec1aa789c44368872c716fd345e 131 Gene3D G3DSA:2.170.150.40 15 128 1.3E-37 T 12-10-2018 JDM601_0095 d745ea488d63f46746dd7a250b2e864f 458 Gene3D G3DSA:3.40.309.10 216 409 1.9E-164 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 JDM601_0095 d745ea488d63f46746dd7a250b2e864f 458 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 212 219 - T 12-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 JDM601_0095 d745ea488d63f46746dd7a250b2e864f 458 SUPERFAMILY SSF53720 6 438 3.4E-120 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 JDM601_0095 d745ea488d63f46746dd7a250b2e864f 458 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 240 251 - T 12-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 JDM601_0095 d745ea488d63f46746dd7a250b2e864f 458 Pfam PF00171 Aldehyde dehydrogenase family 3 429 3.9E-91 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 JDM601_0095 d745ea488d63f46746dd7a250b2e864f 458 Gene3D G3DSA:3.40.605.10 16 429 1.9E-164 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 JDM601_0095 d745ea488d63f46746dd7a250b2e864f 458 PIRSF PIRSF036492 1 458 2.8E-176 T 12-10-2018 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent GO:0006081|GO:0055114 JDM601_3595 46d1877c9c095c3bdc64facec3c8b0d9 292 SUPERFAMILY SSF51735 9 257 3.64E-53 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_3595 46d1877c9c095c3bdc64facec3c8b0d9 292 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 85 96 8.8E-10 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3595 46d1877c9c095c3bdc64facec3c8b0d9 292 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 159 178 8.8E-10 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3595 46d1877c9c095c3bdc64facec3c8b0d9 292 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 140 148 8.8E-10 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3595 46d1877c9c095c3bdc64facec3c8b0d9 292 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 1.3E-24 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3595 46d1877c9c095c3bdc64facec3c8b0d9 292 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 134 150 1.3E-24 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3595 46d1877c9c095c3bdc64facec3c8b0d9 292 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 1.3E-24 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3595 46d1877c9c095c3bdc64facec3c8b0d9 292 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 1.3E-24 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3595 46d1877c9c095c3bdc64facec3c8b0d9 292 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 85 96 1.3E-24 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3595 46d1877c9c095c3bdc64facec3c8b0d9 292 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 18 257 6.6E-39 T 12-10-2018 JDM601_3595 46d1877c9c095c3bdc64facec3c8b0d9 292 Gene3D G3DSA:3.40.50.720 6 287 1.0E-56 T 12-10-2018 JDM601_2225 106d37e148cc628067cf5e83f6a28199 232 PRINTS PR00783 Major intrinsic protein family signature 80 99 6.5E-39 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 JDM601_2225 106d37e148cc628067cf5e83f6a28199 232 PRINTS PR00783 Major intrinsic protein family signature 124 142 6.5E-39 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 JDM601_2225 106d37e148cc628067cf5e83f6a28199 232 PRINTS PR00783 Major intrinsic protein family signature 156 178 6.5E-39 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 JDM601_2225 106d37e148cc628067cf5e83f6a28199 232 PRINTS PR00783 Major intrinsic protein family signature 194 214 6.5E-39 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 JDM601_2225 106d37e148cc628067cf5e83f6a28199 232 PRINTS PR00783 Major intrinsic protein family signature 9 28 6.5E-39 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 JDM601_2225 106d37e148cc628067cf5e83f6a28199 232 PRINTS PR00783 Major intrinsic protein family signature 43 67 6.5E-39 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 JDM601_2225 106d37e148cc628067cf5e83f6a28199 232 Pfam PF00230 Major intrinsic protein 5 211 2.9E-35 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 JDM601_2225 106d37e148cc628067cf5e83f6a28199 232 Gene3D G3DSA:1.20.1080.10 2 228 2.4E-52 T 12-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 JDM601_2225 106d37e148cc628067cf5e83f6a28199 232 ProSitePatterns PS00221 MIP family signature. 61 69 - T 12-10-2018 IPR022357 Major intrinsic protein, conserved site Reactome: R-HSA-432047 JDM601_2225 106d37e148cc628067cf5e83f6a28199 232 ProSitePatterns PS00221 MIP family signature. 173 181 - T 12-10-2018 IPR022357 Major intrinsic protein, conserved site Reactome: R-HSA-432047 JDM601_2225 106d37e148cc628067cf5e83f6a28199 232 SUPERFAMILY SSF81338 5 222 6.41E-51 T 12-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 JDM601_3373 e1f4389f6f4541a97c1d124fe93f19e5 161 SUPERFAMILY SSF54427 3 141 1.85E-35 T 12-10-2018 IPR032710 NTF2-like domain superfamily JDM601_3373 e1f4389f6f4541a97c1d124fe93f19e5 161 Pfam PF13577 SnoaL-like domain 6 125 2.0E-26 T 12-10-2018 IPR037401 SnoaL-like domain JDM601_3373 e1f4389f6f4541a97c1d124fe93f19e5 161 Gene3D G3DSA:3.10.450.50 1 145 3.1E-45 T 12-10-2018 JDM601_0983 72460930030ce2a6ddcb15b4251a6477 1223 Gene3D G3DSA:2.30.30.840 518 581 2.2E-226 T 12-10-2018 JDM601_0983 72460930030ce2a6ddcb15b4251a6477 1223 Pfam PF02559 CarD-like/TRCF domain 515 615 6.7E-29 T 12-10-2018 IPR003711 CarD-like/TRCF domain JDM601_0983 72460930030ce2a6ddcb15b4251a6477 1223 SMART SM00982 1049 1148 5.3E-37 T 12-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 JDM601_0983 72460930030ce2a6ddcb15b4251a6477 1223 SUPERFAMILY SSF141259 508 583 4.71E-17 T 12-10-2018 IPR036101 CarD-like/TRCF domain superfamily JDM601_0983 72460930030ce2a6ddcb15b4251a6477 1223 Pfam PF00270 DEAD/DEAH box helicase 666 806 8.0E-15 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 JDM601_0983 72460930030ce2a6ddcb15b4251a6477 1223 SMART SM00487 640 830 6.1E-27 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain JDM601_0983 72460930030ce2a6ddcb15b4251a6477 1223 Pfam PF03461 TRCF domain 1050 1125 1.5E-22 T 12-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 JDM601_0983 72460930030ce2a6ddcb15b4251a6477 1223 SMART SM01058 514 616 2.0E-45 T 12-10-2018 IPR003711 CarD-like/TRCF domain JDM601_0983 72460930030ce2a6ddcb15b4251a6477 1223 Pfam PF00271 Helicase conserved C-terminal domain 849 949 4.5E-14 T 12-10-2018 IPR001650 Helicase, C-terminal JDM601_0983 72460930030ce2a6ddcb15b4251a6477 1223 Gene3D G3DSA:3.30.2060.10 155 241 2.3E-53 T 12-10-2018 JDM601_0983 72460930030ce2a6ddcb15b4251a6477 1223 SUPERFAMILY SSF143517 1040 1159 2.48E-29 T 12-10-2018 IPR037235 TRCF-like, C-terminal domain JDM601_0983 72460930030ce2a6ddcb15b4251a6477 1223 SUPERFAMILY SSF52540 565 823 4.58E-57 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_0983 72460930030ce2a6ddcb15b4251a6477 1223 Gene3D G3DSA:3.40.50.300 582 821 2.2E-226 T 12-10-2018 JDM601_0983 72460930030ce2a6ddcb15b4251a6477 1223 Gene3D G3DSA:3.40.50.11180 52 326 2.3E-53 T 12-10-2018 JDM601_0983 72460930030ce2a6ddcb15b4251a6477 1223 SUPERFAMILY SSF52540 822 1030 2.66E-46 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_0983 72460930030ce2a6ddcb15b4251a6477 1223 SUPERFAMILY SSF52540 27 342 1.1E-64 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_0983 72460930030ce2a6ddcb15b4251a6477 1223 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 171 1122 0.0 T 12-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 JDM601_0983 72460930030ce2a6ddcb15b4251a6477 1223 Gene3D G3DSA:3.40.50.300 515 1028 2.2E-226 T 12-10-2018 JDM601_0983 72460930030ce2a6ddcb15b4251a6477 1223 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 53 1147 27.324 T 12-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 JDM601_0983 72460930030ce2a6ddcb15b4251a6477 1223 Gene3D G3DSA:3.90.1150.50 1045 1157 9.2E-24 T 12-10-2018 IPR037235 TRCF-like, C-terminal domain JDM601_0983 72460930030ce2a6ddcb15b4251a6477 1223 SUPERFAMILY SSF52540 392 496 7.96E-9 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_0983 72460930030ce2a6ddcb15b4251a6477 1223 SMART SM00490 866 950 7.9E-16 T 12-10-2018 IPR001650 Helicase, C-terminal JDM601_1132 29ed74275f75bf726cd7f431f4d6f6ea 289 Gene3D G3DSA:3.40.50.1820 3 286 1.6E-71 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_1132 29ed74275f75bf726cd7f431f4d6f6ea 289 PRINTS PR00412 Epoxide hydrolase signature 99 112 2.7E-9 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 JDM601_1132 29ed74275f75bf726cd7f431f4d6f6ea 289 PRINTS PR00412 Epoxide hydrolase signature 113 126 2.7E-9 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 JDM601_1132 29ed74275f75bf726cd7f431f4d6f6ea 289 PRINTS PR00412 Epoxide hydrolase signature 225 241 2.7E-9 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 JDM601_1132 29ed74275f75bf726cd7f431f4d6f6ea 289 PRINTS PR00412 Epoxide hydrolase signature 258 280 2.7E-9 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 JDM601_1132 29ed74275f75bf726cd7f431f4d6f6ea 289 PRINTS PR00412 Epoxide hydrolase signature 54 69 2.7E-9 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 JDM601_1132 29ed74275f75bf726cd7f431f4d6f6ea 289 SUPERFAMILY SSF53474 6 281 4.22E-60 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_1132 29ed74275f75bf726cd7f431f4d6f6ea 289 PRINTS PR00111 Alpha/beta hydrolase fold signature 227 241 1.1E-20 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 JDM601_1132 29ed74275f75bf726cd7f431f4d6f6ea 289 PRINTS PR00111 Alpha/beta hydrolase fold signature 99 112 1.1E-20 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 JDM601_1132 29ed74275f75bf726cd7f431f4d6f6ea 289 PRINTS PR00111 Alpha/beta hydrolase fold signature 113 126 1.1E-20 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 JDM601_1132 29ed74275f75bf726cd7f431f4d6f6ea 289 PRINTS PR00111 Alpha/beta hydrolase fold signature 54 69 1.1E-20 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 JDM601_1132 29ed74275f75bf726cd7f431f4d6f6ea 289 Pfam PF00561 alpha/beta hydrolase fold 27 128 3.9E-20 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 JDM601_4145 e0df3cc4914f764143b1176916d314b2 112 Pfam PF06262 Zincin-like metallopeptidase 26 111 4.4E-33 T 12-10-2018 IPR010428 Zincin-like metallopeptidase JDM601_4145 e0df3cc4914f764143b1176916d314b2 112 Gene3D G3DSA:3.30.2010.20 1 111 1.6E-40 T 12-10-2018 IPR038555 Zincin-like metallopeptidase superfamily JDM601_4145 e0df3cc4914f764143b1176916d314b2 112 SUPERFAMILY SSF55486 1 111 1.01E-35 T 12-10-2018 JDM601_0066 f92b8e3037961496e1044a81f763c977 560 Gene3D G3DSA:3.40.1000.70 369 558 8.4E-37 T 12-10-2018 IPR038232 PknH-like extracellular domain superfamily KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1 JDM601_0066 f92b8e3037961496e1044a81f763c977 560 SUPERFAMILY SSF56112 9 314 6.88E-66 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily JDM601_0066 f92b8e3037961496e1044a81f763c977 560 Pfam PF00069 Protein kinase domain 13 270 3.9E-44 T 12-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 JDM601_0066 f92b8e3037961496e1044a81f763c977 560 Gene3D G3DSA:1.10.510.10 99 284 1.1E-47 T 12-10-2018 JDM601_0066 f92b8e3037961496e1044a81f763c977 560 Pfam PF14032 PknH-like extracellular domain 372 556 6.7E-34 T 12-10-2018 IPR026954 PknH-like extracellular domain KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1 JDM601_0066 f92b8e3037961496e1044a81f763c977 560 Gene3D G3DSA:3.30.200.20 3 93 1.8E-30 T 12-10-2018 JDM601_0066 f92b8e3037961496e1044a81f763c977 560 SMART SM00220 13 278 1.0E-57 T 12-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 JDM601_0066 f92b8e3037961496e1044a81f763c977 560 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 132 144 - T 12-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 JDM601_3509 bbc181bfac71732d4a6430bd74d82930 390 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 235 386 1.6E-15 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 JDM601_3509 bbc181bfac71732d4a6430bd74d82930 390 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 127 223 5.9E-22 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 JDM601_3509 bbc181bfac71732d4a6430bd74d82930 390 Gene3D G3DSA:1.20.140.10 239 390 6.0E-24 T 12-10-2018 JDM601_3509 bbc181bfac71732d4a6430bd74d82930 390 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 9 123 2.8E-16 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 JDM601_3509 bbc181bfac71732d4a6430bd74d82930 390 Gene3D G3DSA:1.10.540.10 2 121 1.8E-22 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 JDM601_3509 bbc181bfac71732d4a6430bd74d82930 390 SUPERFAMILY SSF47203 235 388 4.83E-15 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 JDM601_3509 bbc181bfac71732d4a6430bd74d82930 390 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 129 141 - T 12-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 JDM601_3509 bbc181bfac71732d4a6430bd74d82930 390 Gene3D G3DSA:2.40.110.10 126 238 8.0E-37 T 12-10-2018 JDM601_3509 bbc181bfac71732d4a6430bd74d82930 390 SUPERFAMILY SSF56645 3 248 2.88E-69 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 JDM601_1895 34ce5e158cf9b50d0a58a1cbc0ffc827 98 Gene3D G3DSA:1.10.287.1060 1 98 7.5E-56 T 12-10-2018 JDM601_1895 34ce5e158cf9b50d0a58a1cbc0ffc827 98 TIGRFAM TIGR03930 WXG100_ESAT6: WXG100 family type VII secretion target 5 93 1.5E-16 T 12-10-2018 IPR010310 Type VII secretion system ESAT-6-like JDM601_1895 34ce5e158cf9b50d0a58a1cbc0ffc827 98 SUPERFAMILY SSF140453 4 97 6.67E-18 T 12-10-2018 IPR036689 ESAT-6-like superfamily JDM601_1895 34ce5e158cf9b50d0a58a1cbc0ffc827 98 Pfam PF06013 Proteins of 100 residues with WXG 5 89 1.0E-16 T 12-10-2018 IPR010310 Type VII secretion system ESAT-6-like JDM601_1000 34ce5e158cf9b50d0a58a1cbc0ffc827 98 Gene3D G3DSA:1.10.287.1060 1 98 7.5E-56 T 12-10-2018 JDM601_1000 34ce5e158cf9b50d0a58a1cbc0ffc827 98 TIGRFAM TIGR03930 WXG100_ESAT6: WXG100 family type VII secretion target 5 93 1.5E-16 T 12-10-2018 IPR010310 Type VII secretion system ESAT-6-like JDM601_1000 34ce5e158cf9b50d0a58a1cbc0ffc827 98 SUPERFAMILY SSF140453 4 97 6.67E-18 T 12-10-2018 IPR036689 ESAT-6-like superfamily JDM601_1000 34ce5e158cf9b50d0a58a1cbc0ffc827 98 Pfam PF06013 Proteins of 100 residues with WXG 5 89 1.0E-16 T 12-10-2018 IPR010310 Type VII secretion system ESAT-6-like JDM601_2656 585e11a4b3aaacfd9a1c257cdf789f13 278 SUPERFAMILY SSF57716 229 277 9.51E-17 T 12-10-2018 JDM601_2656 585e11a4b3aaacfd9a1c257cdf789f13 278 SUPERFAMILY SSF46946 136 226 6.18E-26 T 12-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 JDM601_2656 585e11a4b3aaacfd9a1c257cdf789f13 278 Gene3D G3DSA:1.10.8.50 139 278 5.4E-45 T 12-10-2018 JDM601_2656 585e11a4b3aaacfd9a1c257cdf789f13 278 ProSitePatterns PS01242 Zinc finger FPG-type signature. 253 277 - T 12-10-2018 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 JDM601_2656 585e11a4b3aaacfd9a1c257cdf789f13 278 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 277 1.3E-98 T 12-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 JDM601_2656 585e11a4b3aaacfd9a1c257cdf789f13 278 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 278 41.514 T 12-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 JDM601_2656 585e11a4b3aaacfd9a1c257cdf789f13 278 SUPERFAMILY SSF81624 2 146 1.23E-33 T 12-10-2018 IPR035937 MutM-like, N-terminal JDM601_2656 585e11a4b3aaacfd9a1c257cdf789f13 278 SMART SM00898 2 118 6.5E-41 T 12-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 JDM601_2656 585e11a4b3aaacfd9a1c257cdf789f13 278 SMART SM01232 137 229 4.4E-41 T 12-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 JDM601_2656 585e11a4b3aaacfd9a1c257cdf789f13 278 Pfam PF06827 Zinc finger found in FPG and IleRS 251 277 3.7E-9 T 12-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 JDM601_2656 585e11a4b3aaacfd9a1c257cdf789f13 278 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 117 5.4E-34 T 12-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 JDM601_2656 585e11a4b3aaacfd9a1c257cdf789f13 278 Gene3D G3DSA:3.20.190.10 1 126 6.2E-35 T 12-10-2018 IPR035937 MutM-like, N-terminal JDM601_2656 585e11a4b3aaacfd9a1c257cdf789f13 278 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 137 224 4.7E-25 T 12-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 JDM601_1178 94cff072981cbb09788377ff9dc104d1 358 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 64 73 - T 12-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 JDM601_1178 94cff072981cbb09788377ff9dc104d1 358 Gene3D G3DSA:3.30.70.360 170 280 1.7E-95 T 12-10-2018 JDM601_1178 94cff072981cbb09788377ff9dc104d1 358 Gene3D G3DSA:3.40.630.10 15 345 1.7E-95 T 12-10-2018 JDM601_1178 94cff072981cbb09788377ff9dc104d1 358 SUPERFAMILY SSF53187 7 357 3.14E-41 T 12-10-2018 JDM601_1178 94cff072981cbb09788377ff9dc104d1 358 TIGRFAM TIGR01900 dapE-gram_pos: succinyl-diaminopimelate desuccinylase 5 356 9.9E-155 T 12-10-2018 IPR010174 Succinyl-diaminopimelate desuccinylase, DapE GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 JDM601_1178 94cff072981cbb09788377ff9dc104d1 358 Pfam PF01546 Peptidase family M20/M25/M40 65 356 5.3E-19 T 12-10-2018 IPR002933 Peptidase M20 GO:0016787 JDM601_1178 94cff072981cbb09788377ff9dc104d1 358 SUPERFAMILY SSF55031 170 273 2.99E-19 T 12-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain JDM601_1178 94cff072981cbb09788377ff9dc104d1 358 Pfam PF07687 Peptidase dimerisation domain 170 268 1.1E-12 T 12-10-2018 IPR011650 Peptidase M20, dimerisation domain JDM601_0984 b7b39c052f292a9e4289ec4a8350b653 294 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 109 183 5.3E-22 T 12-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core JDM601_0984 b7b39c052f292a9e4289ec4a8350b653 294 SUPERFAMILY SSF101386 92 184 3.55E-17 T 12-10-2018 JDM601_0984 b7b39c052f292a9e4289ec4a8350b653 294 Gene3D G3DSA:1.10.287.1080 89 204 7.7E-32 T 12-10-2018 JDM601_2160 66f2f6595f089aee0b215d42026c1f6a 167 SUPERFAMILY SSF55144 7 137 1.83E-11 T 12-10-2018 IPR009097 Cyclic phosphodiesterase JDM601_2160 66f2f6595f089aee0b215d42026c1f6a 167 Gene3D G3DSA:3.90.1140.10 5 156 1.8E-9 T 12-10-2018 JDM601_2160 66f2f6595f089aee0b215d42026c1f6a 167 Pfam PF13563 2'-5' RNA ligase superfamily 29 139 2.7E-7 T 12-10-2018 JDM601_3064 8f8048dda0e92b03e7ebcd011bb5cc79 316 Pfam PF14417 MEDS: MEthanogen/methylotroph, DcmR Sensory domain 12 156 9.0E-28 T 12-10-2018 IPR025847 MEDS domain JDM601_3064 8f8048dda0e92b03e7ebcd011bb5cc79 316 Gene3D G3DSA:3.30.565.10 192 316 8.5E-24 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JDM601_3064 8f8048dda0e92b03e7ebcd011bb5cc79 316 SUPERFAMILY SSF55874 218 310 6.02E-10 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JDM601_3064 8f8048dda0e92b03e7ebcd011bb5cc79 316 Pfam PF13581 Histidine kinase-like ATPase domain 197 307 1.7E-13 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JDM601_4306 54483d8db016d61f86f0851aeddb0306 84 TIGRFAM TIGR00165 S18: ribosomal protein bS18 17 81 6.3E-28 T 12-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JDM601_4306 54483d8db016d61f86f0851aeddb0306 84 ProSitePatterns PS00057 Ribosomal protein S18 signature. 30 53 - T 12-10-2018 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JDM601_4306 54483d8db016d61f86f0851aeddb0306 84 Pfam PF01084 Ribosomal protein S18 26 77 4.5E-23 T 12-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JDM601_4306 54483d8db016d61f86f0851aeddb0306 84 Gene3D G3DSA:4.10.640.10 1 84 2.3E-28 T 12-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JDM601_4306 54483d8db016d61f86f0851aeddb0306 84 PRINTS PR00974 Ribosomal protein S18 family signature 37 47 1.4E-16 T 12-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JDM601_4306 54483d8db016d61f86f0851aeddb0306 84 PRINTS PR00974 Ribosomal protein S18 family signature 69 79 1.4E-16 T 12-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JDM601_4306 54483d8db016d61f86f0851aeddb0306 84 PRINTS PR00974 Ribosomal protein S18 family signature 47 54 1.4E-16 T 12-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JDM601_4306 54483d8db016d61f86f0851aeddb0306 84 PRINTS PR00974 Ribosomal protein S18 family signature 55 69 1.4E-16 T 12-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JDM601_4306 54483d8db016d61f86f0851aeddb0306 84 SUPERFAMILY SSF46911 10 81 1.05E-25 T 12-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JDM601_4306 54483d8db016d61f86f0851aeddb0306 84 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 3 82 20.386 T 12-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JDM601_4306 54483d8db016d61f86f0851aeddb0306 84 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 30 81 5.0E-24 T 12-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JDM601_2749 caf0b00d412b350bf0258fb5f900c8c9 263 ProSitePatterns PS01065 Electron transfer flavoprotein beta-subunit signature. 160 180 - T 12-10-2018 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 JDM601_2749 caf0b00d412b350bf0258fb5f900c8c9 263 SMART SM00893 24 216 8.3E-51 T 12-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 JDM601_2749 caf0b00d412b350bf0258fb5f900c8c9 263 SUPERFAMILY SSF52402 3 257 5.37E-68 T 12-10-2018 JDM601_2749 caf0b00d412b350bf0258fb5f900c8c9 263 Pfam PF01012 Electron transfer flavoprotein domain 25 211 2.8E-42 T 12-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 JDM601_2749 caf0b00d412b350bf0258fb5f900c8c9 263 Gene3D G3DSA:3.40.50.620 2 261 3.3E-78 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JDM601_2749 caf0b00d412b350bf0258fb5f900c8c9 263 PIRSF PIRSF000090 2 263 8.1E-83 T 12-10-2018 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 JDM601_1771 fb6f298184da09201384669ddb8c9f45 260 Pfam PF00459 Inositol monophosphatase family 40 239 5.6E-29 T 12-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 JDM601_1771 fb6f298184da09201384669ddb8c9f45 260 SUPERFAMILY SSF56655 5 256 2.23E-51 T 12-10-2018 JDM601_1771 fb6f298184da09201384669ddb8c9f45 260 Gene3D G3DSA:3.30.540.10 4 138 4.2E-21 T 12-10-2018 JDM601_1771 fb6f298184da09201384669ddb8c9f45 260 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 78 91 - T 12-10-2018 IPR020583 Inositol monophosphatase, metal-binding site JDM601_1771 fb6f298184da09201384669ddb8c9f45 260 Gene3D G3DSA:3.40.190.80 147 256 1.1E-17 T 12-10-2018 JDM601_3796 e5e33fadbef3b7f6f50dc14af0e850ef 254 Pfam PF02405 Permease MlaE 41 241 3.9E-53 T 12-10-2018 IPR030802 ABC transporter permease MalE GO:0043190 JDM601_1570 864585d3e77f7a5b4ca7289e77571c26 465 Pfam PF03129 Anticodon binding domain 371 458 2.5E-21 T 12-10-2018 IPR004154 Anticodon-binding JDM601_1570 864585d3e77f7a5b4ca7289e77571c26 465 PRINTS PR01043 Glycyl-tRNA synthetase signature 322 334 6.6E-55 T 12-10-2018 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 JDM601_1570 864585d3e77f7a5b4ca7289e77571c26 465 PRINTS PR01043 Glycyl-tRNA synthetase signature 24 38 6.6E-55 T 12-10-2018 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 JDM601_1570 864585d3e77f7a5b4ca7289e77571c26 465 PRINTS PR01043 Glycyl-tRNA synthetase signature 212 222 6.6E-55 T 12-10-2018 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 JDM601_1570 864585d3e77f7a5b4ca7289e77571c26 465 PRINTS PR01043 Glycyl-tRNA synthetase signature 195 212 6.6E-55 T 12-10-2018 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 JDM601_1570 864585d3e77f7a5b4ca7289e77571c26 465 PRINTS PR01043 Glycyl-tRNA synthetase signature 142 154 6.6E-55 T 12-10-2018 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 JDM601_1570 864585d3e77f7a5b4ca7289e77571c26 465 PRINTS PR01043 Glycyl-tRNA synthetase signature 163 180 6.6E-55 T 12-10-2018 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 JDM601_1570 864585d3e77f7a5b4ca7289e77571c26 465 PRINTS PR01043 Glycyl-tRNA synthetase signature 408 427 6.6E-55 T 12-10-2018 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 JDM601_1570 864585d3e77f7a5b4ca7289e77571c26 465 SUPERFAMILY SSF55681 5 374 2.29E-117 T 12-10-2018 JDM601_1570 864585d3e77f7a5b4ca7289e77571c26 465 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 162 298 3.5E-7 T 12-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 JDM601_1570 864585d3e77f7a5b4ca7289e77571c26 465 TIGRFAM TIGR00389 glyS_dimeric: glycine--tRNA ligase 6 241 3.1E-82 T 12-10-2018 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 JDM601_1570 864585d3e77f7a5b4ca7289e77571c26 465 Hamap MF_00253_B Glycine--tRNA ligase [glyQS]. 2 463 48.751 T 12-10-2018 IPR022961 Glycine-tRNA ligase, bacterial GO:0004820 KEGG: 00970+6.1.1.14 JDM601_1570 864585d3e77f7a5b4ca7289e77571c26 465 Gene3D G3DSA:3.40.50.800 369 464 1.0E-31 T 12-10-2018 IPR036621 Anticodon-binding domain superfamily JDM601_1570 864585d3e77f7a5b4ca7289e77571c26 465 SUPERFAMILY SSF52954 358 463 3.32E-33 T 12-10-2018 JDM601_2751 0378d09cc58468ac962727e54cb47d71 509 Gene3D G3DSA:3.20.110.10 7 388 1.6E-110 T 12-10-2018 IPR027291 Glycoside hydrolase 38, N-terminal domain superfamily JDM601_2751 0378d09cc58468ac962727e54cb47d71 509 Pfam PF09210 Domain of unknown function (DUF1957) 417 505 1.8E-21 T 12-10-2018 IPR015293 Domain of unknown function DUF1957 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 JDM601_2751 0378d09cc58468ac962727e54cb47d71 509 SUPERFAMILY SSF88688 395 508 5.89E-22 T 12-10-2018 IPR028995 Glycoside hydrolase families 57/38, central domain superfamily JDM601_2751 0378d09cc58468ac962727e54cb47d71 509 SUPERFAMILY SSF88713 9 388 1.33E-94 T 12-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 JDM601_2751 0378d09cc58468ac962727e54cb47d71 509 Gene3D G3DSA:1.20.1430.10 400 508 1.5E-17 T 12-10-2018 IPR037090 Glycoside hydrolase families 57, central domain KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 JDM601_2751 0378d09cc58468ac962727e54cb47d71 509 Pfam PF03065 Glycosyl hydrolase family 57 13 337 3.4E-20 T 12-10-2018 IPR004300 Glycoside hydrolase family 57, N-terminal domain GO:0003824|GO:0005975 JDM601_2161 95b386f16b56215d00b0d306aff8191f 222 Gene3D G3DSA:3.40.50.300 1 222 1.5E-60 T 12-10-2018 JDM601_2161 95b386f16b56215d00b0d306aff8191f 222 SUPERFAMILY SSF52540 1 176 2.66E-34 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_2161 95b386f16b56215d00b0d306aff8191f 222 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 1 203 20.621 T 12-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 JDM601_2161 95b386f16b56215d00b0d306aff8191f 222 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 2 164 1.7E-30 T 12-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 JDM601_2161 95b386f16b56215d00b0d306aff8191f 222 Pfam PF13500 AAA domain 1 178 2.1E-28 T 12-10-2018 JDM601_2161 95b386f16b56215d00b0d306aff8191f 222 PIRSF PIRSF006755 1 191 6.7E-34 T 12-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 JDM601_3831 3486310f5181be86516d1a0fe9ec8e4a 375 SUPERFAMILY SSF53822 32 353 5.05E-34 T 12-10-2018 IPR028082 Periplasmic binding protein-like I JDM601_3831 3486310f5181be86516d1a0fe9ec8e4a 375 Pfam PF13458 Periplasmic binding protein 31 346 6.5E-25 T 12-10-2018 IPR028081 Leucine-binding protein domain JDM601_3831 3486310f5181be86516d1a0fe9ec8e4a 375 Gene3D G3DSA:3.40.50.2300 33 328 1.6E-30 T 12-10-2018 JDM601_3831 3486310f5181be86516d1a0fe9ec8e4a 375 Gene3D G3DSA:3.40.50.2300 131 264 1.6E-30 T 12-10-2018 JDM601_0437 5d4bc75092dfb7afa571a999d156fbda 576 Gene3D G3DSA:2.30.40.10 497 559 2.3E-7 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 JDM601_0437 5d4bc75092dfb7afa571a999d156fbda 576 Gene3D G3DSA:3.20.20.140 59 357 1.2E-53 T 12-10-2018 JDM601_0437 5d4bc75092dfb7afa571a999d156fbda 576 Pfam PF07969 Amidohydrolase family 47 553 1.6E-54 T 12-10-2018 IPR013108 Amidohydrolase 3 JDM601_0437 5d4bc75092dfb7afa571a999d156fbda 576 SUPERFAMILY SSF51556 58 500 4.01E-64 T 12-10-2018 IPR032466 Metal-dependent hydrolase JDM601_0437 5d4bc75092dfb7afa571a999d156fbda 576 SUPERFAMILY SSF51338 6 566 9.92E-21 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 JDM601_0437 5d4bc75092dfb7afa571a999d156fbda 576 Gene3D G3DSA:2.30.40.10 2 58 5.1E-5 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 JDM601_0437 5d4bc75092dfb7afa571a999d156fbda 576 Gene3D G3DSA:3.20.20.140 435 560 2.3E-7 T 12-10-2018 JDM601_2320 7aab52bb311610ac0be14bad64742997 900 SUPERFAMILY SSF48371 617 862 1.38E-31 T 12-10-2018 IPR016024 Armadillo-type fold JDM601_2320 7aab52bb311610ac0be14bad64742997 900 Gene3D G3DSA:3.50.50.90 342 566 2.9E-40 T 12-10-2018 JDM601_2320 7aab52bb311610ac0be14bad64742997 900 Gene3D G3DSA:3.50.50.90 5 294 6.5E-72 T 12-10-2018 JDM601_2320 7aab52bb311610ac0be14bad64742997 900 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 363 385 5.3E-11 T 12-10-2018 JDM601_2320 7aab52bb311610ac0be14bad64742997 900 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 17 36 5.3E-11 T 12-10-2018 JDM601_2320 7aab52bb311610ac0be14bad64742997 900 Pfam PF13646 HEAT repeats 625 678 1.4E-7 T 12-10-2018 JDM601_2320 7aab52bb311610ac0be14bad64742997 900 Pfam PF13646 HEAT repeats 749 817 5.4E-8 T 12-10-2018 JDM601_2320 7aab52bb311610ac0be14bad64742997 900 Gene3D G3DSA:1.25.10.10 778 897 1.0E-16 T 12-10-2018 IPR011989 Armadillo-like helical JDM601_2320 7aab52bb311610ac0be14bad64742997 900 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 378 385 3.6E-8 T 12-10-2018 JDM601_2320 7aab52bb311610ac0be14bad64742997 900 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 16 38 3.6E-8 T 12-10-2018 JDM601_2320 7aab52bb311610ac0be14bad64742997 900 Pfam PF02910 Fumarate reductase flavoprotein C-term 449 558 2.0E-11 T 12-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 JDM601_2320 7aab52bb311610ac0be14bad64742997 900 Pfam PF00890 FAD binding domain 16 387 7.2E-38 T 12-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 JDM601_2320 7aab52bb311610ac0be14bad64742997 900 SUPERFAMILY SSF46977 434 561 2.35E-33 T 12-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 JDM601_2320 7aab52bb311610ac0be14bad64742997 900 Gene3D G3DSA:1.25.10.10 619 777 1.5E-15 T 12-10-2018 IPR011989 Armadillo-like helical JDM601_2320 7aab52bb311610ac0be14bad64742997 900 SUPERFAMILY SSF51905 5 435 3.39E-57 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_2320 7aab52bb311610ac0be14bad64742997 900 SMART SM00567 E-Z type HEAT repeats 785 815 1.8 T 12-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 JDM601_2320 7aab52bb311610ac0be14bad64742997 900 SMART SM00567 E-Z type HEAT repeats 728 754 790.0 T 12-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 JDM601_2320 7aab52bb311610ac0be14bad64742997 900 SMART SM00567 E-Z type HEAT repeats 817 846 0.035 T 12-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 JDM601_2320 7aab52bb311610ac0be14bad64742997 900 SMART SM00567 E-Z type HEAT repeats 608 633 1000.0 T 12-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 JDM601_2320 7aab52bb311610ac0be14bad64742997 900 SMART SM00567 E-Z type HEAT repeats 635 664 260.0 T 12-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 JDM601_2985 4f0dfe458614f45da88968c6f5dd522b 549 SMART SM00304 231 283 3.9E-12 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JDM601_2985 4f0dfe458614f45da88968c6f5dd522b 549 SMART SM00388 291 358 1.0E-16 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JDM601_2985 4f0dfe458614f45da88968c6f5dd522b 549 Pfam PF00672 HAMP domain 231 279 7.4E-8 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JDM601_2985 4f0dfe458614f45da88968c6f5dd522b 549 PRINTS PR00344 Bacterial sensor protein C-terminal signature 475 493 1.2E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JDM601_2985 4f0dfe458614f45da88968c6f5dd522b 549 PRINTS PR00344 Bacterial sensor protein C-terminal signature 440 454 1.2E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JDM601_2985 4f0dfe458614f45da88968c6f5dd522b 549 PRINTS PR00344 Bacterial sensor protein C-terminal signature 458 468 1.2E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JDM601_2985 4f0dfe458614f45da88968c6f5dd522b 549 PRINTS PR00344 Bacterial sensor protein C-terminal signature 499 512 1.2E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JDM601_2985 4f0dfe458614f45da88968c6f5dd522b 549 Gene3D G3DSA:1.20.1480.50 198 285 2.9E-11 T 12-10-2018 JDM601_2985 4f0dfe458614f45da88968c6f5dd522b 549 SUPERFAMILY SSF47384 274 358 2.35E-17 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 JDM601_2985 4f0dfe458614f45da88968c6f5dd522b 549 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 405 513 7.9E-20 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JDM601_2985 4f0dfe458614f45da88968c6f5dd522b 549 SMART SM00387 404 515 4.4E-31 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JDM601_2985 4f0dfe458614f45da88968c6f5dd522b 549 SUPERFAMILY SSF55874 347 517 3.8E-43 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JDM601_2985 4f0dfe458614f45da88968c6f5dd522b 549 Gene3D G3DSA:1.10.287.130 286 362 4.4E-18 T 12-10-2018 JDM601_2985 4f0dfe458614f45da88968c6f5dd522b 549 Pfam PF00512 His Kinase A (phospho-acceptor) domain 292 358 3.6E-16 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JDM601_2985 4f0dfe458614f45da88968c6f5dd522b 549 Gene3D G3DSA:3.30.565.10 363 515 7.8E-38 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JDM601_2985 4f0dfe458614f45da88968c6f5dd522b 549 SUPERFAMILY SSF158472 231 281 1.7E-8 T 12-10-2018 JDM601_2914 4f7ae592dd298437da1e99e053074477 304 Pfam PF09297 NADH pyrophosphatase zinc ribbon domain 129 159 1.2E-6 T 12-10-2018 IPR015376 Zinc ribbon, NADH pyrophosphatase GO:0016787|GO:0046872 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381|MetaCyc: PWY-7761 JDM601_2914 4f7ae592dd298437da1e99e053074477 304 Gene3D G3DSA:3.90.79.10 161 304 4.0E-36 T 12-10-2018 JDM601_2914 4f7ae592dd298437da1e99e053074477 304 ProSitePatterns PS00893 Nudix box signature. 195 216 - T 12-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 JDM601_2914 4f7ae592dd298437da1e99e053074477 304 Pfam PF00293 NUDIX domain 164 272 2.6E-18 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 JDM601_2914 4f7ae592dd298437da1e99e053074477 304 SUPERFAMILY SSF55811 114 280 5.96E-41 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 JDM601_2914 4f7ae592dd298437da1e99e053074477 304 Pfam PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain 44 126 2.7E-5 T 12-10-2018 IPR015375 NADH pyrophosphatase-like, N-terminal GO:0016787 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381|MetaCyc: PWY-7761 JDM601_1549 f6776bf716da5de1b95d53696da5e294 347 Gene3D G3DSA:1.10.10.10 2 86 1.0E-30 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JDM601_1549 f6776bf716da5de1b95d53696da5e294 347 PIRSF PIRSF005485 1 347 3.8E-101 T 12-10-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 JDM601_1549 f6776bf716da5de1b95d53696da5e294 347 SUPERFAMILY SSF55781 73 345 5.49E-53 T 12-10-2018 JDM601_1549 f6776bf716da5de1b95d53696da5e294 347 Gene3D G3DSA:3.30.450.40 106 340 2.2E-37 T 12-10-2018 IPR029016 GAF-like domain superfamily JDM601_1549 f6776bf716da5de1b95d53696da5e294 347 SUPERFAMILY SSF46785 5 84 1.36E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JDM601_1549 f6776bf716da5de1b95d53696da5e294 347 Gene3D G3DSA:3.30.390.60 129 236 2.2E-37 T 12-10-2018 IPR023120 Winged helix-turn-helix transcription repressor, HrcA, inserted dimerising domain superfamily JDM601_1549 f6776bf716da5de1b95d53696da5e294 347 Hamap MF_00081 Heat-inducible transcription repressor HrcA [hrcA]. 3 337 27.129 T 12-10-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 JDM601_1549 f6776bf716da5de1b95d53696da5e294 347 TIGRFAM TIGR00331 hrcA: heat-inducible transcription repressor HrcA 5 342 3.8E-86 T 12-10-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 JDM601_1549 f6776bf716da5de1b95d53696da5e294 347 Pfam PF01628 HrcA protein C terminal domain 105 330 1.9E-60 T 12-10-2018 IPR021153 Heat-inducible transcription repressor HrcA, C-terminal GO:0003677|GO:0006355 JDM601_0960 b4678989d27179c059583f15f83d1e06 320 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 23 178 1.1E-16 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 JDM601_0960 b4678989d27179c059583f15f83d1e06 320 Pfam PF08281 Sigma-70, region 4 126 176 2.1E-11 T 12-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 JDM601_0960 b4678989d27179c059583f15f83d1e06 320 TIGRFAM TIGR02957 SigX4: RNA polymerase sigma-70 factor, TIGR02957 family 26 308 1.4E-100 T 12-10-2018 IPR014303 RNA polymerase sigma-70, ECF type JDM601_0960 b4678989d27179c059583f15f83d1e06 320 Gene3D G3DSA:3.10.450.50 187 317 5.2E-8 T 12-10-2018 JDM601_0960 b4678989d27179c059583f15f83d1e06 320 SUPERFAMILY SSF88946 20 106 9.81E-9 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 JDM601_0960 b4678989d27179c059583f15f83d1e06 320 Gene3D G3DSA:1.10.10.10 108 181 2.2E-12 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JDM601_0960 b4678989d27179c059583f15f83d1e06 320 SUPERFAMILY SSF54427 189 310 1.45E-14 T 12-10-2018 IPR032710 NTF2-like domain superfamily JDM601_0960 b4678989d27179c059583f15f83d1e06 320 SUPERFAMILY SSF88659 101 180 5.61E-13 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like JDM601_0960 b4678989d27179c059583f15f83d1e06 320 Pfam PF04542 Sigma-70 region 2 29 92 7.0E-9 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 JDM601_4151 e54a95ac5872657855a41f083d2e84ad 759 Pfam PF00150 Cellulase (glycosyl hydrolase family 5) 346 639 8.7E-31 T 12-10-2018 IPR001547 Glycoside hydrolase, family 5 GO:0004553|GO:0005975 JDM601_4151 e54a95ac5872657855a41f083d2e84ad 759 Gene3D G3DSA:2.60.40.1180 317 754 9.0E-155 T 12-10-2018 IPR013780 Glycosyl hydrolase, all-beta JDM601_4151 e54a95ac5872657855a41f083d2e84ad 759 Gene3D G3DSA:3.20.20.80 327 675 9.0E-155 T 12-10-2018 JDM601_4151 e54a95ac5872657855a41f083d2e84ad 759 SUPERFAMILY SSF51445 310 641 5.36E-48 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily JDM601_1056 9c57f118ba95f5be8574252c0b17e922 372 Gene3D G3DSA:3.40.50.720 4 351 5.8E-75 T 12-10-2018 JDM601_1056 9c57f118ba95f5be8574252c0b17e922 372 Pfam PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family 14 273 3.1E-59 T 12-10-2018 IPR002225 3-beta hydroxysteroid dehydrogenase/isomerase GO:0003854|GO:0006694|GO:0016616|GO:0055114 JDM601_1056 9c57f118ba95f5be8574252c0b17e922 372 SUPERFAMILY SSF51735 12 351 3.36E-64 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_0874 6953b14610cfd00c06c5809fc43058d2 408 Pfam PF01566 Natural resistance-associated macrophage protein 30 378 8.6E-111 T 12-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 JDM601_0874 6953b14610cfd00c06c5809fc43058d2 408 PRINTS PR00447 Natural resistance-associated macrophage protein signature 117 136 4.0E-28 T 12-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 JDM601_0874 6953b14610cfd00c06c5809fc43058d2 408 PRINTS PR00447 Natural resistance-associated macrophage protein signature 143 164 4.0E-28 T 12-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 JDM601_0874 6953b14610cfd00c06c5809fc43058d2 408 PRINTS PR00447 Natural resistance-associated macrophage protein signature 192 215 4.0E-28 T 12-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 JDM601_0874 6953b14610cfd00c06c5809fc43058d2 408 PRINTS PR00447 Natural resistance-associated macrophage protein signature 89 115 4.0E-28 T 12-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 JDM601_0874 6953b14610cfd00c06c5809fc43058d2 408 PRINTS PR00447 Natural resistance-associated macrophage protein signature 294 313 4.0E-28 T 12-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 JDM601_0874 6953b14610cfd00c06c5809fc43058d2 408 TIGRFAM TIGR01197 nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 11 372 2.0E-85 T 12-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 JDM601_1208 593a1ec89941ba9cee6819556be07405 275 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 82 266 1.3E-19 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 JDM601_1208 593a1ec89941ba9cee6819556be07405 275 Gene3D G3DSA:1.10.3720.10 3 266 1.0E-61 T 12-10-2018 IPR035906 MetI-like superfamily JDM601_1208 593a1ec89941ba9cee6819556be07405 275 SUPERFAMILY SSF161098 3 275 6.43E-71 T 12-10-2018 IPR035906 MetI-like superfamily JDM601_0451 3f9def2189ab7b35aacab01520d40f6f 295 SUPERFAMILY SSF53335 19 293 1.33E-69 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JDM601_0451 3f9def2189ab7b35aacab01520d40f6f 295 Pfam PF02353 Mycolic acid cyclopropane synthetase 14 289 2.6E-103 T 12-10-2018 JDM601_0451 3f9def2189ab7b35aacab01520d40f6f 295 Gene3D G3DSA:3.40.50.150 18 295 4.2E-92 T 12-10-2018 JDM601_0451 3f9def2189ab7b35aacab01520d40f6f 295 PIRSF PIRSF003085 3 295 4.4E-97 T 12-10-2018 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 JDM601_0401 626e5efc517efd9ef300f7c9f3563e1f 276 SUPERFAMILY SSF56219 4 267 2.22E-67 T 12-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily JDM601_0401 626e5efc517efd9ef300f7c9f3563e1f 276 Gene3D G3DSA:3.60.10.10 4 268 6.2E-66 T 12-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily JDM601_0401 626e5efc517efd9ef300f7c9f3563e1f 276 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 4 266 2.2E-57 T 12-10-2018 JDM601_0401 626e5efc517efd9ef300f7c9f3563e1f 276 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 4 267 9.7E-78 T 12-10-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 JDM601_0401 626e5efc517efd9ef300f7c9f3563e1f 276 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 7 260 4.6E-19 T 12-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase JDM601_1652 015a7f7f3a1e0c3fd2260093727b5711 292 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 6 284 2.9E-14 T 12-10-2018 IPR020801 Polyketide synthase, acyl transferase domain JDM601_1652 015a7f7f3a1e0c3fd2260093727b5711 292 Gene3D G3DSA:3.30.70.250 117 180 2.3E-78 T 12-10-2018 JDM601_1652 015a7f7f3a1e0c3fd2260093727b5711 292 Gene3D G3DSA:3.40.366.10 7 270 2.3E-78 T 12-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 JDM601_1652 015a7f7f3a1e0c3fd2260093727b5711 292 Pfam PF00698 Acyl transferase domain 34 273 2.1E-21 T 12-10-2018 IPR014043 Acyl transferase JDM601_1652 015a7f7f3a1e0c3fd2260093727b5711 292 SUPERFAMILY SSF55048 119 172 6.93E-11 T 12-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding JDM601_1652 015a7f7f3a1e0c3fd2260093727b5711 292 SUPERFAMILY SSF52151 7 290 3.92E-49 T 12-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase JDM601_1765 662eeac5bd2084dc6d0cdd24d6e79065 543 Gene3D G3DSA:1.10.10.1320 13 75 3.0E-25 T 12-10-2018 JDM601_1765 662eeac5bd2084dc6d0cdd24d6e79065 543 Pfam PF03055 Retinal pigment epithelial membrane protein 115 541 5.2E-96 T 12-10-2018 IPR004294 Carotenoid oxygenase GO:0016702|GO:0055114 JDM601_1765 662eeac5bd2084dc6d0cdd24d6e79065 543 Pfam PF13490 Putative zinc-finger 22 47 3.0E-6 T 12-10-2018 IPR027383 Putative zinc-finger JDM601_4217 050267a626fe97ac0bb894fed28e0572 393 Pfam PF08028 Acyl-CoA dehydrogenase, C-terminal domain 237 368 8.6E-42 T 12-10-2018 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain JDM601_4217 050267a626fe97ac0bb894fed28e0572 393 SUPERFAMILY SSF47203 227 364 5.15E-18 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 JDM601_4217 050267a626fe97ac0bb894fed28e0572 393 Gene3D G3DSA:2.40.110.10 108 207 1.5E-33 T 12-10-2018 JDM601_4217 050267a626fe97ac0bb894fed28e0572 393 Gene3D G3DSA:1.20.140.10 209 393 6.7E-51 T 12-10-2018 JDM601_4217 050267a626fe97ac0bb894fed28e0572 393 PIRSF PIRSF016578 1 392 6.6E-133 T 12-10-2018 JDM601_4217 050267a626fe97ac0bb894fed28e0572 393 SUPERFAMILY SSF56645 11 204 1.02E-24 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 JDM601_4217 050267a626fe97ac0bb894fed28e0572 393 Gene3D G3DSA:1.10.540.10 1 107 2.3E-26 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 JDM601_1435 0f7d618ec3c232d7c698b91e5d1f5cb8 135 ProSitePatterns PS01213 Protozoan/cyanobacterial globins signature. 58 82 - T 12-10-2018 IPR019795 Globin, bacterial-like, conserved site GO:0015671|GO:0019825 JDM601_1435 0f7d618ec3c232d7c698b91e5d1f5cb8 135 Gene3D G3DSA:1.10.490.10 9 135 1.5E-48 T 12-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 JDM601_1435 0f7d618ec3c232d7c698b91e5d1f5cb8 135 SUPERFAMILY SSF46458 10 134 2.26E-37 T 12-10-2018 IPR009050 Globin-like superfamily JDM601_1435 0f7d618ec3c232d7c698b91e5d1f5cb8 135 Pfam PF01152 Bacterial-like globin 11 128 7.6E-39 T 12-10-2018 IPR001486 Truncated hemoglobin GO:0019825 JDM601_1467 ad5f37238d9565526ee638a2e5f88637 481 TIGRFAM TIGR03595 Obg_CgtA_exten: Obg family GTPase CgtA, C-terminal extension 367 436 1.7E-26 T 12-10-2018 IPR015349 GTP-binding protein OBG, C-terminal GO:0000166 JDM601_1467 ad5f37238d9565526ee638a2e5f88637 481 Gene3D G3DSA:3.40.50.300 160 350 6.5E-45 T 12-10-2018 JDM601_1467 ad5f37238d9565526ee638a2e5f88637 481 SUPERFAMILY SSF82051 4 157 3.01E-47 T 12-10-2018 IPR036726 GTP1/OBG domain superfamily JDM601_1467 ad5f37238d9565526ee638a2e5f88637 481 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 4 340 1.4E-123 T 12-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 JDM601_1467 ad5f37238d9565526ee638a2e5f88637 481 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 210 225 2.4E-33 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 JDM601_1467 ad5f37238d9565526ee638a2e5f88637 481 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 183 201 2.4E-33 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 JDM601_1467 ad5f37238d9565526ee638a2e5f88637 481 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 227 245 2.4E-33 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 JDM601_1467 ad5f37238d9565526ee638a2e5f88637 481 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 162 182 2.4E-33 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 JDM601_1467 ad5f37238d9565526ee638a2e5f88637 481 Hamap MF_01454 GTPase Obg [obg]. 3 341 43.972 T 12-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 JDM601_1467 ad5f37238d9565526ee638a2e5f88637 481 Gene3D G3DSA:2.40.240.60 365 438 5.5E-21 T 12-10-2018 IPR036346 GTP-binding protein OBG, C-terminal domain superfamily JDM601_1467 ad5f37238d9565526ee638a2e5f88637 481 Gene3D G3DSA:2.70.210.12 1 158 1.5E-50 T 12-10-2018 IPR036726 GTP1/OBG domain superfamily JDM601_1467 ad5f37238d9565526ee638a2e5f88637 481 SUPERFAMILY SSF52540 151 348 2.46E-45 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_1467 ad5f37238d9565526ee638a2e5f88637 481 Pfam PF01926 50S ribosome-binding GTPase 161 293 8.7E-20 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 JDM601_1467 ad5f37238d9565526ee638a2e5f88637 481 Pfam PF09269 Domain of unknown function (DUF1967) 367 435 3.5E-24 T 12-10-2018 IPR015349 GTP-binding protein OBG, C-terminal GO:0000166 JDM601_1467 ad5f37238d9565526ee638a2e5f88637 481 SUPERFAMILY SSF102741 365 437 2.62E-22 T 12-10-2018 IPR036346 GTP-binding protein OBG, C-terminal domain superfamily JDM601_1467 ad5f37238d9565526ee638a2e5f88637 481 Pfam PF01018 GTP1/OBG 5 158 5.6E-51 T 12-10-2018 IPR006169 GTP1/OBG domain JDM601_1467 ad5f37238d9565526ee638a2e5f88637 481 ProSitePatterns PS00905 GTP1/OBG family signature. 212 225 - T 12-10-2018 IPR006074 GTP1/OBG, conserved site GO:0005525 JDM601_1400 b6db9bfe5e4f18233014030072eb1835 511 Pfam PF00501 AMP-binding enzyme 3 409 2.2E-109 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 JDM601_1400 b6db9bfe5e4f18233014030072eb1835 511 ProSitePatterns PS00455 Putative AMP-binding domain signature. 158 169 - T 12-10-2018 IPR020845 AMP-binding, conserved site JDM601_1400 b6db9bfe5e4f18233014030072eb1835 511 Gene3D G3DSA:3.30.300.30 405 508 1.6E-30 T 12-10-2018 JDM601_1400 b6db9bfe5e4f18233014030072eb1835 511 SUPERFAMILY SSF56801 2 506 9.42E-158 T 12-10-2018 JDM601_1400 b6db9bfe5e4f18233014030072eb1835 511 Pfam PF13193 AMP-binding enzyme C-terminal domain 418 494 2.6E-18 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain JDM601_1400 b6db9bfe5e4f18233014030072eb1835 511 Gene3D G3DSA:3.40.50.12780 1 404 2.4E-120 T 12-10-2018 JDM601_0772 700bb8ff373a8f2d327420041811caf3 1119 SUPERFAMILY SSF52540 233 802 2.9E-29 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_0772 700bb8ff373a8f2d327420041811caf3 1119 ProSitePatterns PS00690 DEAH-box subfamily ATP-dependent helicases signature. 326 335 - T 12-10-2018 IPR002464 DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site JDM601_0772 700bb8ff373a8f2d327420041811caf3 1119 SMART SM00490 682 800 4.9E-9 T 12-10-2018 IPR001650 Helicase, C-terminal JDM601_0772 700bb8ff373a8f2d327420041811caf3 1119 SMART SM00487 216 396 5.3E-8 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain JDM601_0772 700bb8ff373a8f2d327420041811caf3 1119 Pfam PF00176 SNF2 family N-terminal domain 326 381 1.1E-6 T 12-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 JDM601_0772 700bb8ff373a8f2d327420041811caf3 1119 Pfam PF00271 Helicase conserved C-terminal domain 745 800 7.2E-12 T 12-10-2018 IPR001650 Helicase, C-terminal JDM601_0772 700bb8ff373a8f2d327420041811caf3 1119 Gene3D G3DSA:3.40.50.10810 218 441 7.6E-20 T 12-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily JDM601_0772 700bb8ff373a8f2d327420041811caf3 1119 Gene3D G3DSA:3.40.50.300 590 825 2.3E-24 T 12-10-2018 JDM601_0772 700bb8ff373a8f2d327420041811caf3 1119 SUPERFAMILY SSF56024 100 176 5.97E-9 T 12-10-2018 JDM601_0772 700bb8ff373a8f2d327420041811caf3 1119 Pfam PF13091 PLD-like domain 6 169 2.7E-10 T 12-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 JDM601_3476 3ba519dad145534b446192dd6c35921a 396 SUPERFAMILY SSF53901 6 116 5.44E-6 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 JDM601_3476 3ba519dad145534b446192dd6c35921a 396 SUPERFAMILY SSF50249 283 371 8.74E-9 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold JDM601_3476 3ba519dad145534b446192dd6c35921a 396 Pfam PF01796 DUF35 OB-fold domain, acyl-CoA-associated 306 367 5.5E-7 T 12-10-2018 IPR002878 Domain of unknown function DUF35, OB-fold, C-terminal JDM601_3476 3ba519dad145534b446192dd6c35921a 396 Gene3D G3DSA:3.40.47.10 4 136 1.7E-6 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 JDM601_4261 c97b3de952077bae03dd065b4dcd8eef 473 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 246 253 - T 12-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 JDM601_4261 c97b3de952077bae03dd065b4dcd8eef 473 Gene3D G3DSA:3.40.605.10 13 468 7.1E-159 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 JDM601_4261 c97b3de952077bae03dd065b4dcd8eef 473 Pfam PF00171 Aldehyde dehydrogenase family 17 469 2.7E-153 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 JDM601_4261 c97b3de952077bae03dd065b4dcd8eef 473 Gene3D G3DSA:3.40.309.10 251 440 7.1E-159 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 JDM601_4261 c97b3de952077bae03dd065b4dcd8eef 473 SUPERFAMILY SSF53720 7 470 7.46E-148 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 JDM601_4261 c97b3de952077bae03dd065b4dcd8eef 473 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 274 285 - T 12-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 JDM601_1361 3badadb818cbc39dcffd76eb05e80f34 1038 Pfam PF04851 Type III restriction enzyme, res subunit 291 493 2.8E-13 T 12-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 JDM601_1361 3badadb818cbc39dcffd76eb05e80f34 1038 Gene3D G3DSA:3.40.50.300 515 763 4.0E-23 T 12-10-2018 JDM601_1361 3badadb818cbc39dcffd76eb05e80f34 1038 SUPERFAMILY SSF52540 257 538 1.27E-20 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_1361 3badadb818cbc39dcffd76eb05e80f34 1038 Gene3D G3DSA:3.90.1570.50 115 274 2.5E-5 T 12-10-2018 JDM601_1361 3badadb818cbc39dcffd76eb05e80f34 1038 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 46 219 4.6E-12 T 12-10-2018 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 JDM601_1361 3badadb818cbc39dcffd76eb05e80f34 1038 SMART SM00487 286 515 1.1E-9 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain JDM601_2937 5482991b1cc0e746dec9521c6a4455a2 244 SUPERFAMILY SSF88659 168 224 1.08E-16 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like JDM601_2937 5482991b1cc0e746dec9521c6a4455a2 244 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 66 223 3.9E-25 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 JDM601_2937 5482991b1cc0e746dec9521c6a4455a2 244 Gene3D G3DSA:1.10.10.10 161 229 2.9E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JDM601_2937 5482991b1cc0e746dec9521c6a4455a2 244 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 83 114 - T 12-10-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 JDM601_2937 5482991b1cc0e746dec9521c6a4455a2 244 Gene3D G3DSA:1.10.1740.10 46 131 1.2E-33 T 12-10-2018 JDM601_2937 5482991b1cc0e746dec9521c6a4455a2 244 SUPERFAMILY SSF88946 46 144 7.06E-23 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 JDM601_2937 5482991b1cc0e746dec9521c6a4455a2 244 Pfam PF08281 Sigma-70, region 4 169 220 2.3E-16 T 12-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 JDM601_2937 5482991b1cc0e746dec9521c6a4455a2 244 TIGRFAM TIGR02947 SigH_actino: RNA polymerase sigma-70 factor, TIGR02947 family 48 235 8.4E-107 T 12-10-2018 IPR014293 RNA polymerase sigma-70, actinobacteria GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 JDM601_2937 5482991b1cc0e746dec9521c6a4455a2 244 Pfam PF04542 Sigma-70 region 2 66 128 1.6E-17 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 JDM601_0860 b0d2980729e03d399c283398c6d80cb8 262 SMART SM00065 39 191 8.3E-7 T 12-10-2018 IPR003018 GAF domain GO:0005515 JDM601_0860 b0d2980729e03d399c283398c6d80cb8 262 Pfam PF13185 GAF domain 39 181 9.1E-16 T 12-10-2018 IPR003018 GAF domain GO:0005515 JDM601_0860 b0d2980729e03d399c283398c6d80cb8 262 Pfam PF03861 ANTAR domain 195 248 3.9E-18 T 12-10-2018 IPR005561 ANTAR domain GO:0003723 JDM601_0860 b0d2980729e03d399c283398c6d80cb8 262 SMART SM01012 193 248 3.0E-19 T 12-10-2018 IPR005561 ANTAR domain GO:0003723 JDM601_0860 b0d2980729e03d399c283398c6d80cb8 262 SUPERFAMILY SSF52172 178 248 6.46E-9 T 12-10-2018 IPR011006 CheY-like superfamily JDM601_0860 b0d2980729e03d399c283398c6d80cb8 262 Gene3D G3DSA:1.10.10.10 195 255 6.7E-11 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JDM601_0860 b0d2980729e03d399c283398c6d80cb8 262 PIRSF PIRSF036625 7 260 1.0E-53 T 12-10-2018 IPR012074 GAF-ANTAR transcription anti-termination regulator, putative JDM601_0860 b0d2980729e03d399c283398c6d80cb8 262 SUPERFAMILY SSF55781 40 193 9.38E-21 T 12-10-2018 JDM601_0860 b0d2980729e03d399c283398c6d80cb8 262 Gene3D G3DSA:3.30.450.40 20 194 4.2E-24 T 12-10-2018 IPR029016 GAF-like domain superfamily JDM601_1469 2a8fcf20b4d183ef1c99bc99ab9bddc4 217 SUPERFAMILY SSF46689 10 81 1.26E-11 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JDM601_1469 2a8fcf20b4d183ef1c99bc99ab9bddc4 217 SUPERFAMILY SSF48498 90 205 7.71E-28 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily JDM601_1469 2a8fcf20b4d183ef1c99bc99ab9bddc4 217 Gene3D G3DSA:1.10.10.60 2 66 1.0E-10 T 12-10-2018 JDM601_1469 2a8fcf20b4d183ef1c99bc99ab9bddc4 217 Pfam PF00440 Bacterial regulatory proteins, tetR family 23 69 2.0E-8 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_1469 2a8fcf20b4d183ef1c99bc99ab9bddc4 217 Gene3D G3DSA:1.10.357.10 67 212 2.3E-35 T 12-10-2018 JDM601_1503 d2b97bd1bfe739bb2d7db37e18e74e66 86 SUPERFAMILY SSF46992 3 86 9.68E-29 T 12-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 JDM601_1503 d2b97bd1bfe739bb2d7db37e18e74e66 86 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 12 86 2.0E-22 T 12-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 JDM601_1503 d2b97bd1bfe739bb2d7db37e18e74e66 86 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 16.994 T 12-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 JDM601_1503 d2b97bd1bfe739bb2d7db37e18e74e66 86 TIGRFAM TIGR00029 S20: ribosomal protein bS20 2 86 1.3E-24 T 12-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 JDM601_1503 d2b97bd1bfe739bb2d7db37e18e74e66 86 Pfam PF01649 Ribosomal protein S20 2 84 1.2E-27 T 12-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 JDM601_1503 d2b97bd1bfe739bb2d7db37e18e74e66 86 Gene3D G3DSA:1.20.58.110 1 86 9.9E-29 T 12-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 JDM601_1328 eacb9aa4cc1e6a761be35a062f0b55ea 740 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 130 216 1.9E-21 T 12-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 JDM601_1328 eacb9aa4cc1e6a761be35a062f0b55ea 740 SUPERFAMILY SSF81296 16 119 5.13E-18 T 12-10-2018 IPR014756 Immunoglobulin E-set JDM601_1328 eacb9aa4cc1e6a761be35a062f0b55ea 740 SUPERFAMILY SSF51011 632 734 1.46E-33 T 12-10-2018 JDM601_1328 eacb9aa4cc1e6a761be35a062f0b55ea 740 Gene3D G3DSA:2.60.40.1180 632 735 3.8E-39 T 12-10-2018 IPR013780 Glycosyl hydrolase, all-beta JDM601_1328 eacb9aa4cc1e6a761be35a062f0b55ea 740 SUPERFAMILY SSF51445 191 625 2.16E-111 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily JDM601_1328 eacb9aa4cc1e6a761be35a062f0b55ea 740 PIRSF PIRSF000463 8 740 2.0E-273 T 12-10-2018 IPR037439 1,4-alpha-glucan-branching enzyme GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900|Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 JDM601_1328 eacb9aa4cc1e6a761be35a062f0b55ea 740 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 637 734 1.2E-21 T 12-10-2018 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 JDM601_1328 eacb9aa4cc1e6a761be35a062f0b55ea 740 Gene3D G3DSA:3.20.20.80 232 631 1.6E-178 T 12-10-2018 JDM601_1328 eacb9aa4cc1e6a761be35a062f0b55ea 740 Hamap MF_00685 1,4-alpha-glucan branching enzyme GlgB [glgB]. 106 735 43.013 T 12-10-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 JDM601_1328 eacb9aa4cc1e6a761be35a062f0b55ea 740 Pfam PF00128 Alpha amylase, catalytic domain 280 348 2.8E-8 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 JDM601_1328 eacb9aa4cc1e6a761be35a062f0b55ea 740 TIGRFAM TIGR01515 branching_enzym: 1,4-alpha-glucan branching enzyme 114 732 3.2E-260 T 12-10-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 JDM601_1328 eacb9aa4cc1e6a761be35a062f0b55ea 740 SUPERFAMILY SSF81296 148 205 8.4E-10 T 12-10-2018 IPR014756 Immunoglobulin E-set JDM601_1328 eacb9aa4cc1e6a761be35a062f0b55ea 740 SMART SM00642 259 618 9.0E-8 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 JDM601_1328 eacb9aa4cc1e6a761be35a062f0b55ea 740 Gene3D G3DSA:2.60.40.10 4 231 3.6E-72 T 12-10-2018 IPR013783 Immunoglobulin-like fold JDM601_4207 52b7a8c8d3a772df43eda5fa7dd10cf1 170 Gene3D G3DSA:3.30.530.20 19 169 1.5E-24 T 12-10-2018 IPR023393 START-like domain superfamily JDM601_4207 52b7a8c8d3a772df43eda5fa7dd10cf1 170 Pfam PF10604 Polyketide cyclase / dehydrase and lipid transport 21 156 6.5E-23 T 12-10-2018 IPR019587 Polyketide cyclase/dehydrase JDM601_4207 52b7a8c8d3a772df43eda5fa7dd10cf1 170 SUPERFAMILY SSF55961 21 160 5.5E-26 T 12-10-2018 JDM601_3843 4e8b85fbd2fc978a12b860fc4bec943f 788 Gene3D G3DSA:3.40.50.10540 1 329 6.0E-80 T 12-10-2018 IPR023606 CoA-transferase family III domain superfamily JDM601_3843 4e8b85fbd2fc978a12b860fc4bec943f 788 Gene3D G3DSA:3.30.1540.10 614 707 7.4E-108 T 12-10-2018 JDM601_3843 4e8b85fbd2fc978a12b860fc4bec943f 788 Pfam PF02515 CoA-transferase family III 1 364 1.8E-71 T 12-10-2018 IPR003673 CoA-transferase family III GO:0003824 JDM601_3843 4e8b85fbd2fc978a12b860fc4bec943f 788 Pfam PF02515 CoA-transferase family III 387 757 7.3E-90 T 12-10-2018 IPR003673 CoA-transferase family III GO:0003824 JDM601_3843 4e8b85fbd2fc978a12b860fc4bec943f 788 SUPERFAMILY SSF89796 383 781 2.75E-89 T 12-10-2018 IPR023606 CoA-transferase family III domain superfamily JDM601_3843 4e8b85fbd2fc978a12b860fc4bec943f 788 SUPERFAMILY SSF89796 5 372 9.81E-77 T 12-10-2018 IPR023606 CoA-transferase family III domain superfamily JDM601_3843 4e8b85fbd2fc978a12b860fc4bec943f 788 Gene3D G3DSA:3.30.1540.10 216 309 6.0E-80 T 12-10-2018 JDM601_3843 4e8b85fbd2fc978a12b860fc4bec943f 788 Gene3D G3DSA:3.40.50.10540 386 775 7.4E-108 T 12-10-2018 IPR023606 CoA-transferase family III domain superfamily JDM601_3677 3017dd25e0d1ed03d46630508d34e477 238 Pfam PF07110 EthD domain 126 194 8.7E-6 T 12-10-2018 IPR009799 EthD domain JDM601_3677 3017dd25e0d1ed03d46630508d34e477 238 SUPERFAMILY SSF54909 118 203 3.75E-8 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel JDM601_2722 57a979c8a2c20a57ced73bd844158b2a 580 SUPERFAMILY SSF52518 1 182 4.48E-61 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold JDM601_2722 57a979c8a2c20a57ced73bd844158b2a 580 Gene3D G3DSA:3.40.50.970 359 569 1.2E-69 T 12-10-2018 JDM601_2722 57a979c8a2c20a57ced73bd844158b2a 580 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 424 443 - T 12-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 JDM601_2722 57a979c8a2c20a57ced73bd844158b2a 580 SUPERFAMILY SSF52518 364 565 1.97E-67 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold JDM601_2722 57a979c8a2c20a57ced73bd844158b2a 580 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 1 562 6.4E-232 T 12-10-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 JDM601_2722 57a979c8a2c20a57ced73bd844158b2a 580 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 191 326 3.1E-49 T 12-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 JDM601_2722 57a979c8a2c20a57ced73bd844158b2a 580 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 387 540 4.3E-50 T 12-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 JDM601_2722 57a979c8a2c20a57ced73bd844158b2a 580 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 1 167 8.9E-56 T 12-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 JDM601_2722 57a979c8a2c20a57ced73bd844158b2a 580 Gene3D G3DSA:3.40.50.1220 184 353 1.1E-62 T 12-10-2018 JDM601_2722 57a979c8a2c20a57ced73bd844158b2a 580 SUPERFAMILY SSF52467 184 355 9.63E-62 T 12-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily JDM601_2722 57a979c8a2c20a57ced73bd844158b2a 580 Gene3D G3DSA:3.40.50.970 1 173 1.0E-67 T 12-10-2018 JDM601_2494 e5d81cad01be0200375c127dc413e0be 113 Pfam PF13560 Helix-turn-helix domain 9 67 1.4E-12 T 12-10-2018 JDM601_2494 e5d81cad01be0200375c127dc413e0be 113 SMART SM00530 12 67 9.6E-10 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 JDM601_2494 e5d81cad01be0200375c127dc413e0be 113 Gene3D G3DSA:1.10.260.40 3 76 1.2E-17 T 12-10-2018 JDM601_2494 e5d81cad01be0200375c127dc413e0be 113 SUPERFAMILY SSF47413 4 71 2.42E-14 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 JDM601_3431 c0c9a9d7f912d3dd215731de0fabb429 279 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 171 190 6.4E-8 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3431 c0c9a9d7f912d3dd215731de0fabb429 279 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 96 107 6.4E-8 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3431 c0c9a9d7f912d3dd215731de0fabb429 279 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 159 6.4E-8 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3431 c0c9a9d7f912d3dd215731de0fabb429 279 TIGRFAM TIGR03971 SDR_subfam_1: SDR family mycofactocin-dependent oxidoreductase 5 278 5.9E-117 T 12-10-2018 IPR023985 Mycofactocin-dependent oxidoreductase JDM601_3431 c0c9a9d7f912d3dd215731de0fabb429 279 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 240 260 2.1E-27 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3431 c0c9a9d7f912d3dd215731de0fabb429 279 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 2.1E-27 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3431 c0c9a9d7f912d3dd215731de0fabb429 279 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 96 107 2.1E-27 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3431 c0c9a9d7f912d3dd215731de0fabb429 279 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 145 161 2.1E-27 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3431 c0c9a9d7f912d3dd215731de0fabb429 279 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 190 2.1E-27 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3431 c0c9a9d7f912d3dd215731de0fabb429 279 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 192 209 2.1E-27 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3431 c0c9a9d7f912d3dd215731de0fabb429 279 Gene3D G3DSA:3.40.50.720 1 279 2.0E-83 T 12-10-2018 JDM601_3431 c0c9a9d7f912d3dd215731de0fabb429 279 SUPERFAMILY SSF51735 6 277 3.66E-67 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_3431 c0c9a9d7f912d3dd215731de0fabb429 279 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 158 186 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 JDM601_3431 c0c9a9d7f912d3dd215731de0fabb429 279 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 275 3.2E-48 T 12-10-2018 JDM601_4321 dfc2b3ca13574aef2c1c80812ab3b911 221 SUPERFAMILY SSF51735 3 209 4.57E-51 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_4321 dfc2b3ca13574aef2c1c80812ab3b911 221 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 67 78 1.2E-6 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_4321 dfc2b3ca13574aef2c1c80812ab3b911 221 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 119 127 1.2E-6 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_4321 dfc2b3ca13574aef2c1c80812ab3b911 221 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 139 158 1.2E-6 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_4321 dfc2b3ca13574aef2c1c80812ab3b911 221 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 126 154 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 JDM601_4321 dfc2b3ca13574aef2c1c80812ab3b911 221 Pfam PF00106 short chain dehydrogenase 3 179 1.2E-39 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_4321 dfc2b3ca13574aef2c1c80812ab3b911 221 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 113 129 3.0E-22 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_4321 dfc2b3ca13574aef2c1c80812ab3b911 221 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 175 3.0E-22 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_4321 dfc2b3ca13574aef2c1c80812ab3b911 221 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 3.0E-22 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_4321 dfc2b3ca13574aef2c1c80812ab3b911 221 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 67 78 3.0E-22 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_4321 dfc2b3ca13574aef2c1c80812ab3b911 221 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 139 158 3.0E-22 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_4321 dfc2b3ca13574aef2c1c80812ab3b911 221 Gene3D G3DSA:3.40.50.720 2 221 1.2E-56 T 12-10-2018 JDM601_0876 0e7a46ab4d47739edd0bf011c9eabbf1 263 Gene3D G3DSA:3.40.50.720 1 255 5.4E-76 T 12-10-2018 JDM601_0876 0e7a46ab4d47739edd0bf011c9eabbf1 263 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 17 252 1.3E-59 T 12-10-2018 JDM601_0876 0e7a46ab4d47739edd0bf011c9eabbf1 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 12 29 2.0E-38 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0876 0e7a46ab4d47739edd0bf011c9eabbf1 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 86 97 2.0E-38 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0876 0e7a46ab4d47739edd0bf011c9eabbf1 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 2.0E-38 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0876 0e7a46ab4d47739edd0bf011c9eabbf1 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 160 179 2.0E-38 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0876 0e7a46ab4d47739edd0bf011c9eabbf1 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 215 235 2.0E-38 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0876 0e7a46ab4d47739edd0bf011c9eabbf1 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 134 150 2.0E-38 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0876 0e7a46ab4d47739edd0bf011c9eabbf1 263 SUPERFAMILY SSF51735 10 252 4.88E-76 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_0876 0e7a46ab4d47739edd0bf011c9eabbf1 263 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 147 175 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 JDM601_0876 0e7a46ab4d47739edd0bf011c9eabbf1 263 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 11 190 0.0064 T 12-10-2018 JDM601_0876 0e7a46ab4d47739edd0bf011c9eabbf1 263 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 86 97 8.4E-8 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0876 0e7a46ab4d47739edd0bf011c9eabbf1 263 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 160 179 8.4E-8 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0876 0e7a46ab4d47739edd0bf011c9eabbf1 263 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 140 148 8.4E-8 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2517 db7e54d393f4ae70480f9b0ed6a58ad3 212 Gene3D G3DSA:1.10.10.60 4 66 1.6E-15 T 12-10-2018 JDM601_2517 db7e54d393f4ae70480f9b0ed6a58ad3 212 SUPERFAMILY SSF48498 90 206 7.31E-23 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily JDM601_2517 db7e54d393f4ae70480f9b0ed6a58ad3 212 Pfam PF00440 Bacterial regulatory proteins, tetR family 25 71 2.0E-12 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_2517 db7e54d393f4ae70480f9b0ed6a58ad3 212 SUPERFAMILY SSF46689 12 95 2.05E-18 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JDM601_2517 db7e54d393f4ae70480f9b0ed6a58ad3 212 Gene3D G3DSA:1.10.357.10 67 209 4.0E-35 T 12-10-2018 JDM601_2517 db7e54d393f4ae70480f9b0ed6a58ad3 212 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 46 69 6.0E-8 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_2517 db7e54d393f4ae70480f9b0ed6a58ad3 212 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 25 38 6.0E-8 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_3824 8c3f27bbfab64f5f321c97b129e35b5c 260 Gene3D G3DSA:3.40.50.720 2 253 2.6E-46 T 12-10-2018 JDM601_3824 8c3f27bbfab64f5f321c97b129e35b5c 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 77 88 1.5E-6 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3824 8c3f27bbfab64f5f321c97b129e35b5c 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 150 169 1.5E-6 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3824 8c3f27bbfab64f5f321c97b129e35b5c 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 130 138 1.5E-6 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3824 8c3f27bbfab64f5f321c97b129e35b5c 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 124 140 4.7E-20 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3824 8c3f27bbfab64f5f321c97b129e35b5c 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 150 169 4.7E-20 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3824 8c3f27bbfab64f5f321c97b129e35b5c 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 77 88 4.7E-20 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3824 8c3f27bbfab64f5f321c97b129e35b5c 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 188 4.7E-20 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3824 8c3f27bbfab64f5f321c97b129e35b5c 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 4.7E-20 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3824 8c3f27bbfab64f5f321c97b129e35b5c 260 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 137 165 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 JDM601_3824 8c3f27bbfab64f5f321c97b129e35b5c 260 SUPERFAMILY SSF51735 1 235 1.74E-47 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_3824 8c3f27bbfab64f5f321c97b129e35b5c 260 Pfam PF00106 short chain dehydrogenase 2 189 3.2E-40 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0500 01582b3f792c05f6ad70e1a579621022 175 PIRSF PIRSF018072 1 153 1.3E-55 T 12-10-2018 IPR016709 Uncharacterised protein family UPF0336 JDM601_0500 01582b3f792c05f6ad70e1a579621022 175 Gene3D G3DSA:3.10.129.10 5 160 2.0E-42 T 12-10-2018 JDM601_0500 01582b3f792c05f6ad70e1a579621022 175 Pfam PF13452 N-terminal half of MaoC dehydratase 11 140 1.0E-30 T 12-10-2018 IPR039569 N-terminal of MaoC-like dehydratase Reactome: R-HSA-193368|Reactome: R-HSA-2046106|Reactome: R-HSA-389887|Reactome: R-HSA-390247|Reactome: R-HSA-9033241|Reactome: R-HSA-9033500 JDM601_0500 01582b3f792c05f6ad70e1a579621022 175 SUPERFAMILY SSF54637 11 146 5.57E-37 T 12-10-2018 IPR029069 HotDog domain superfamily JDM601_0500 01582b3f792c05f6ad70e1a579621022 175 Hamap MF_00799 UPF0336 protein . 1 151 33.571 T 12-10-2018 IPR016709 Uncharacterised protein family UPF0336 JDM601_1092 9c0a96c95c610216c145994c8d5ea360 431 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 28 41 2.6E-9 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_1092 9c0a96c95c610216c145994c8d5ea360 431 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 48 71 2.6E-9 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_1092 9c0a96c95c610216c145994c8d5ea360 431 SUPERFAMILY SSF46689 242 320 1.1E-12 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JDM601_1092 9c0a96c95c610216c145994c8d5ea360 431 Gene3D G3DSA:1.10.10.60 18 63 1.2E-15 T 12-10-2018 JDM601_1092 9c0a96c95c610216c145994c8d5ea360 431 Pfam PF00440 Bacterial regulatory proteins, tetR family 249 294 3.6E-12 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_1092 9c0a96c95c610216c145994c8d5ea360 431 Pfam PF00440 Bacterial regulatory proteins, tetR family 28 73 6.2E-13 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_1092 9c0a96c95c610216c145994c8d5ea360 431 Gene3D G3DSA:1.10.357.10 65 212 1.6E-15 T 12-10-2018 JDM601_1092 9c0a96c95c610216c145994c8d5ea360 431 SUPERFAMILY SSF48498 100 210 5.56E-6 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily JDM601_1092 9c0a96c95c610216c145994c8d5ea360 431 Gene3D G3DSA:1.10.357.10 291 426 7.8E-9 T 12-10-2018 JDM601_1092 9c0a96c95c610216c145994c8d5ea360 431 Gene3D G3DSA:1.10.10.60 238 290 6.3E-14 T 12-10-2018 JDM601_1092 9c0a96c95c610216c145994c8d5ea360 431 SUPERFAMILY SSF46689 21 87 6.98E-16 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JDM601_1297 91058c6234f1d4673ec39b9eec999db4 80 Pfam PF01197 Ribosomal protein L31 1 66 5.6E-32 T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JDM601_1297 91058c6234f1d4673ec39b9eec999db4 80 PRINTS PR01249 Ribosomal protein L31 signature 2 19 2.9E-22 T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JDM601_1297 91058c6234f1d4673ec39b9eec999db4 80 PRINTS PR01249 Ribosomal protein L31 signature 32 47 2.9E-22 T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JDM601_1297 91058c6234f1d4673ec39b9eec999db4 80 PRINTS PR01249 Ribosomal protein L31 signature 47 65 2.9E-22 T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JDM601_1297 91058c6234f1d4673ec39b9eec999db4 80 Gene3D G3DSA:2.30.170.50 1 70 5.4E-31 T 12-10-2018 JDM601_1297 91058c6234f1d4673ec39b9eec999db4 80 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 67 8.7E-33 T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JDM601_1297 91058c6234f1d4673ec39b9eec999db4 80 SUPERFAMILY SSF143800 1 67 1.57E-25 T 12-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JDM601_1297 91058c6234f1d4673ec39b9eec999db4 80 Hamap MF_00501 50S ribosomal protein L31 [rpmE]. 1 69 31.025 T 12-10-2018 IPR027491 Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 JDM601_1297 91058c6234f1d4673ec39b9eec999db4 80 ProSitePatterns PS01143 Ribosomal protein L31 signature. 36 57 - T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JDM601_4318 c47caf10aec944dd1da2484544d74866 593 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 84 299 9.0E-43 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF JDM601_4318 c47caf10aec944dd1da2484544d74866 593 SMART SM00062 83 302 1.3E-47 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF JDM601_4318 c47caf10aec944dd1da2484544d74866 593 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 363 461 2.0E-18 T 12-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 JDM601_4318 c47caf10aec944dd1da2484544d74866 593 SUPERFAMILY SSF161098 363 571 7.72E-35 T 12-10-2018 IPR035906 MetI-like superfamily JDM601_4318 c47caf10aec944dd1da2484544d74866 593 Gene3D G3DSA:3.40.190.10 170 263 5.8E-46 T 12-10-2018 JDM601_4318 c47caf10aec944dd1da2484544d74866 593 Gene3D G3DSA:1.10.3720.10 350 573 4.8E-44 T 12-10-2018 IPR035906 MetI-like superfamily JDM601_4318 c47caf10aec944dd1da2484544d74866 593 Gene3D G3DSA:3.40.190.10 86 298 5.8E-46 T 12-10-2018 JDM601_4318 c47caf10aec944dd1da2484544d74866 593 SUPERFAMILY SSF53850 81 305 9.78E-47 T 12-10-2018 JDM601_4318 c47caf10aec944dd1da2484544d74866 593 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 386 571 8.4E-21 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 JDM601_3418 2d76be2e450c10847a0d8e7baac55a78 263 Gene3D G3DSA:3.40.50.300 9 176 1.7E-33 T 12-10-2018 JDM601_3418 2d76be2e450c10847a0d8e7baac55a78 263 SUPERFAMILY SSF52540 14 225 1.42E-32 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_3418 2d76be2e450c10847a0d8e7baac55a78 263 Pfam PF07728 AAA domain (dynein-related subfamily) 25 159 1.2E-34 T 12-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 JDM601_3418 2d76be2e450c10847a0d8e7baac55a78 263 Pfam PF08406 CbbQ/NirQ/NorQ C-terminal 172 256 2.1E-19 T 12-10-2018 IPR013615 CbbQ/NirQ/NorQ, C-terminal JDM601_2246 ef80d76d2cf4caff3da05318acabed7d 1596 Pfam PF00689 Cation transporting ATPase, C-terminus 1408 1569 7.0E-15 T 12-10-2018 IPR006068 Cation-transporting P-type ATPase, C-terminal Reactome: R-HSA-936837 JDM601_2246 ef80d76d2cf4caff3da05318acabed7d 1596 Gene3D G3DSA:2.70.150.10 829 946 7.5E-31 T 12-10-2018 JDM601_2246 ef80d76d2cf4caff3da05318acabed7d 1596 SUPERFAMILY SSF81653 846 942 6.15E-21 T 12-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 JDM601_2246 ef80d76d2cf4caff3da05318acabed7d 1596 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 1172 1190 6.0E-17 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 JDM601_2246 ef80d76d2cf4caff3da05318acabed7d 1596 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 1320 1336 6.0E-17 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 JDM601_2246 ef80d76d2cf4caff3da05318acabed7d 1596 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 1352 1377 6.0E-17 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 JDM601_2246 ef80d76d2cf4caff3da05318acabed7d 1596 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 1292 1308 6.0E-17 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 JDM601_2246 ef80d76d2cf4caff3da05318acabed7d 1596 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 1288 1400 3.8E-26 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 JDM601_2246 ef80d76d2cf4caff3da05318acabed7d 1596 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 849 1066 1.1E-29 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 JDM601_2246 ef80d76d2cf4caff3da05318acabed7d 1596 SUPERFAMILY SSF56784 1043 1426 3.81E-46 T 12-10-2018 IPR036412 HAD-like superfamily JDM601_2246 ef80d76d2cf4caff3da05318acabed7d 1596 SUPERFAMILY SSF81665 761 1570 8.5E-51 T 12-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 JDM601_2246 ef80d76d2cf4caff3da05318acabed7d 1596 Pfam PF00702 haloacid dehalogenase-like hydrolase 1041 1334 9.8E-28 T 12-10-2018 JDM601_2246 ef80d76d2cf4caff3da05318acabed7d 1596 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 1047 1053 - T 12-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 JDM601_2246 ef80d76d2cf4caff3da05318acabed7d 1596 Gene3D G3DSA:3.40.50.1000 1220 1364 4.9E-41 T 12-10-2018 IPR023214 HAD superfamily JDM601_2246 ef80d76d2cf4caff3da05318acabed7d 1596 Gene3D G3DSA:1.20.1110.10 947 1064 8.4E-19 T 12-10-2018 JDM601_2246 ef80d76d2cf4caff3da05318acabed7d 1596 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 1344 1356 2.0E-27 T 12-10-2018 JDM601_2246 ef80d76d2cf4caff3da05318acabed7d 1596 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 1219 1230 2.0E-27 T 12-10-2018 JDM601_2246 ef80d76d2cf4caff3da05318acabed7d 1596 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 1045 1059 2.0E-27 T 12-10-2018 JDM601_2246 ef80d76d2cf4caff3da05318acabed7d 1596 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 886 900 2.0E-27 T 12-10-2018 JDM601_2246 ef80d76d2cf4caff3da05318acabed7d 1596 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 1241 1251 2.0E-27 T 12-10-2018 JDM601_2246 ef80d76d2cf4caff3da05318acabed7d 1596 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 1320 1339 2.0E-27 T 12-10-2018 JDM601_2246 ef80d76d2cf4caff3da05318acabed7d 1596 Gene3D G3DSA:3.40.1110.10 1067 1219 1.8E-23 T 12-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 JDM601_2246 ef80d76d2cf4caff3da05318acabed7d 1596 Pfam PF00122 E1-E2 ATPase 844 1025 1.3E-38 T 12-10-2018 JDM601_4289 2eef31cb798ef2010a381e54d9df64bc 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 147 166 1.7E-22 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_4289 2eef31cb798ef2010a381e54d9df64bc 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 74 85 1.7E-22 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_4289 2eef31cb798ef2010a381e54d9df64bc 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 121 137 1.7E-22 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_4289 2eef31cb798ef2010a381e54d9df64bc 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 168 185 1.7E-22 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_4289 2eef31cb798ef2010a381e54d9df64bc 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 219 239 1.7E-22 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_4289 2eef31cb798ef2010a381e54d9df64bc 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 25 42 1.7E-22 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_4289 2eef31cb798ef2010a381e54d9df64bc 257 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 1 163 1.8E-4 T 12-10-2018 JDM601_4289 2eef31cb798ef2010a381e54d9df64bc 257 SUPERFAMILY SSF51735 1 257 2.76E-63 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_4289 2eef31cb798ef2010a381e54d9df64bc 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 147 166 1.1E-8 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_4289 2eef31cb798ef2010a381e54d9df64bc 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 74 85 1.1E-8 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_4289 2eef31cb798ef2010a381e54d9df64bc 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 127 135 1.1E-8 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_4289 2eef31cb798ef2010a381e54d9df64bc 257 Gene3D G3DSA:3.40.50.720 1 257 6.5E-67 T 12-10-2018 JDM601_4289 2eef31cb798ef2010a381e54d9df64bc 257 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 8 256 9.0E-48 T 12-10-2018 JDM601_4289 2eef31cb798ef2010a381e54d9df64bc 257 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 134 162 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 JDM601_4148 a59a9ebf4252cc2e3f9fd17d89a0af46 291 Gene3D G3DSA:3.40.190.10 1 98 2.1E-30 T 12-10-2018 JDM601_4148 a59a9ebf4252cc2e3f9fd17d89a0af46 291 ProSitePatterns PS00858 Prephenate dehydratase signature 2. 229 236 - T 12-10-2018 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 JDM601_4148 a59a9ebf4252cc2e3f9fd17d89a0af46 291 SUPERFAMILY SSF53850 3 196 8.15E-45 T 12-10-2018 JDM601_4148 a59a9ebf4252cc2e3f9fd17d89a0af46 291 Pfam PF01842 ACT domain 203 267 1.1E-11 T 12-10-2018 IPR002912 ACT domain JDM601_4148 a59a9ebf4252cc2e3f9fd17d89a0af46 291 PIRSF PIRSF001500 1 283 5.4E-56 T 12-10-2018 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 JDM601_4148 a59a9ebf4252cc2e3f9fd17d89a0af46 291 Pfam PF00800 Prephenate dehydratase 4 189 1.6E-43 T 12-10-2018 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 JDM601_4148 a59a9ebf4252cc2e3f9fd17d89a0af46 291 Gene3D G3DSA:3.40.190.10 99 179 1.8E-20 T 12-10-2018 JDM601_4148 a59a9ebf4252cc2e3f9fd17d89a0af46 291 SUPERFAMILY SSF55021 189 281 2.75E-24 T 12-10-2018 JDM601_4148 a59a9ebf4252cc2e3f9fd17d89a0af46 291 Gene3D G3DSA:3.30.70.260 193 284 1.7E-29 T 12-10-2018 JDM601_0664 50a65f0f5e54782d8454871d08d96de1 235 Gene3D G3DSA:3.30.190.20 25 225 1.1E-79 T 12-10-2018 JDM601_0664 50a65f0f5e54782d8454871d08d96de1 235 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 139 - T 12-10-2018 IPR023673 Ribosomal protein L1, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JDM601_0664 50a65f0f5e54782d8454871d08d96de1 235 PIRSF PIRSF002155 1 227 1.6E-71 T 12-10-2018 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JDM601_0664 50a65f0f5e54782d8454871d08d96de1 235 SUPERFAMILY SSF56808 6 226 3.53E-81 T 12-10-2018 IPR023674 Ribosomal protein L1-like JDM601_0664 50a65f0f5e54782d8454871d08d96de1 235 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 226 3.4E-101 T 12-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 JDM601_0664 50a65f0f5e54782d8454871d08d96de1 235 Pfam PF00687 Ribosomal protein L1p/L10e family 31 220 6.2E-52 T 12-10-2018 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein JDM601_0664 50a65f0f5e54782d8454871d08d96de1 235 Gene3D G3DSA:3.40.50.790 68 159 1.1E-79 T 12-10-2018 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich JDM601_0664 50a65f0f5e54782d8454871d08d96de1 235 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 229 41.606 T 12-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 JDM601_1659 51e670be3b28823f2b349380284be973 287 Pfam PF00296 Luciferase-like monooxygenase 18 261 5.4E-17 T 12-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 JDM601_1659 51e670be3b28823f2b349380284be973 287 Gene3D G3DSA:3.20.20.30 12 130 1.9E-15 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 JDM601_1659 51e670be3b28823f2b349380284be973 287 Gene3D G3DSA:3.20.20.30 131 286 2.1E-9 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 JDM601_1659 51e670be3b28823f2b349380284be973 287 TIGRFAM TIGR03620 F420_MSMEG_4141: probable F420-dependent oxidoreductase, MSMEG_4141 family 5 285 5.8E-111 T 12-10-2018 IPR019922 Luciferase-like, F420-dependent oxidoreductase, MSMEG4141, predicted JDM601_1659 51e670be3b28823f2b349380284be973 287 SUPERFAMILY SSF51679 8 286 2.69E-37 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 JDM601_1848 74a9cb673dc6e55d72b7edb05dca4214 542 SUPERFAMILY SSF48452 25 187 1.68E-6 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JDM601_1848 74a9cb673dc6e55d72b7edb05dca4214 542 TIGRFAM TIGR01460 HAD-SF-IIA: HAD hydrolase, family IIA 215 434 2.9E-30 T 12-10-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA JDM601_1848 74a9cb673dc6e55d72b7edb05dca4214 542 Gene3D G3DSA:1.25.40.10 6 198 7.2E-10 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JDM601_1848 74a9cb673dc6e55d72b7edb05dca4214 542 Gene3D G3DSA:3.40.50.1000 276 387 9.4E-78 T 12-10-2018 IPR023214 HAD superfamily JDM601_1848 74a9cb673dc6e55d72b7edb05dca4214 542 Gene3D G3DSA:3.40.50.1000 212 439 9.4E-78 T 12-10-2018 IPR023214 HAD superfamily JDM601_1848 74a9cb673dc6e55d72b7edb05dca4214 542 SUPERFAMILY SSF56784 211 460 2.02E-47 T 12-10-2018 IPR036412 HAD-like superfamily JDM601_1848 74a9cb673dc6e55d72b7edb05dca4214 542 Pfam PF13344 Haloacid dehalogenase-like hydrolase 214 312 7.4E-19 T 12-10-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA JDM601_1848 74a9cb673dc6e55d72b7edb05dca4214 542 Pfam PF13242 HAD-hyrolase-like 387 459 2.2E-12 T 12-10-2018 JDM601_1848 74a9cb673dc6e55d72b7edb05dca4214 542 Gene3D G3DSA:3.30.300.290 464 542 1.4E-28 T 12-10-2018 JDM601_4176 564ef5729bc18d2ce071e1264fd4b8c0 1519 SUPERFAMILY SSF51395 444 1214 2.93E-263 T 12-10-2018 JDM601_4176 564ef5729bc18d2ce071e1264fd4b8c0 1519 Pfam PF01493 GXGXG motif 1260 1445 2.3E-81 T 12-10-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0016491|GO:0055114 JDM601_4176 564ef5729bc18d2ce071e1264fd4b8c0 1519 Gene3D G3DSA:3.60.20.10 1 436 2.6E-166 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal JDM601_4176 564ef5729bc18d2ce071e1264fd4b8c0 1519 SUPERFAMILY SSF69336 1229 1497 1.11E-92 T 12-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 JDM601_4176 564ef5729bc18d2ce071e1264fd4b8c0 1519 SUPERFAMILY SSF56235 2 430 1.54E-140 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal JDM601_4176 564ef5729bc18d2ce071e1264fd4b8c0 1519 Pfam PF01645 Conserved region in glutamate synthase 810 1179 3.0E-153 T 12-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 JDM601_4176 564ef5729bc18d2ce071e1264fd4b8c0 1519 Gene3D G3DSA:2.160.20.60 1232 1508 1.7E-109 T 12-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 JDM601_4176 564ef5729bc18d2ce071e1264fd4b8c0 1519 Gene3D G3DSA:3.20.20.70 437 796 4.9E-132 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JDM601_4176 564ef5729bc18d2ce071e1264fd4b8c0 1519 Gene3D G3DSA:3.20.20.70 797 1227 6.0E-191 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JDM601_4176 564ef5729bc18d2ce071e1264fd4b8c0 1519 Pfam PF00310 Glutamine amidotransferases class-II 1 427 1.8E-169 T 12-10-2018 IPR017932 Glutamine amidotransferase type 2 domain JDM601_4176 564ef5729bc18d2ce071e1264fd4b8c0 1519 Pfam PF04898 Glutamate synthase central domain 454 746 3.5E-110 T 12-10-2018 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 JDM601_0528 c3169f1d2ed733b340a615ea05b0b6d2 447 SUPERFAMILY SSF52540 194 430 8.24E-30 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_0528 c3169f1d2ed733b340a615ea05b0b6d2 447 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 196 405 4.0E-11 T 12-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain JDM601_0528 c3169f1d2ed733b340a615ea05b0b6d2 447 Gene3D G3DSA:3.40.50.300 194 432 8.6E-36 T 12-10-2018 JDM601_1813 2716fcbd7e6a3aac91768c3815214e6c 228 Gene3D G3DSA:3.60.15.10 29 226 1.8E-48 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like JDM601_1813 2716fcbd7e6a3aac91768c3815214e6c 228 Pfam PF00753 Metallo-beta-lactamase superfamily 36 207 2.1E-13 T 12-10-2018 IPR001279 Metallo-beta-lactamase JDM601_1813 2716fcbd7e6a3aac91768c3815214e6c 228 SUPERFAMILY SSF56281 33 224 1.23E-46 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like JDM601_1813 2716fcbd7e6a3aac91768c3815214e6c 228 SMART SM00849 39 207 2.4E-30 T 12-10-2018 IPR001279 Metallo-beta-lactamase JDM601_3526 5db19ce55cdf8e696e9ea110b9013e97 333 Gene3D G3DSA:1.10.620.20 1 281 9.4E-112 T 12-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 JDM601_3526 5db19ce55cdf8e696e9ea110b9013e97 333 SUPERFAMILY SSF47240 1 319 4.28E-84 T 12-10-2018 IPR009078 Ferritin-like superfamily JDM601_3526 5db19ce55cdf8e696e9ea110b9013e97 333 Pfam PF03405 Fatty acid desaturase 7 315 8.2E-85 T 12-10-2018 IPR005067 Fatty acid desaturase, type 2 GO:0006631|GO:0045300|GO:0055114 JDM601_3526 5db19ce55cdf8e696e9ea110b9013e97 333 PIRSF PIRSF000346 1 327 1.4E-105 T 12-10-2018 IPR005067 Fatty acid desaturase, type 2 GO:0006631|GO:0045300|GO:0055114 JDM601_2307 92113957c8ec2bbdc8d7223dadae8955 186 SUPERFAMILY SSF52540 2 179 4.29E-53 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_2307 92113957c8ec2bbdc8d7223dadae8955 186 Gene3D G3DSA:3.40.50.300 1 174 5.5E-61 T 12-10-2018 JDM601_2307 92113957c8ec2bbdc8d7223dadae8955 186 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 1 178 9.5E-61 T 12-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 JDM601_2307 92113957c8ec2bbdc8d7223dadae8955 186 Pfam PF00625 Guanylate kinase 2 178 4.0E-37 T 12-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit JDM601_2307 92113957c8ec2bbdc8d7223dadae8955 186 Gene3D G3DSA:3.30.63.10 30 93 5.5E-61 T 12-10-2018 JDM601_2307 92113957c8ec2bbdc8d7223dadae8955 186 Hamap MF_00328 Guanylate kinase [gmk]. 1 182 32.695 T 12-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 JDM601_2307 92113957c8ec2bbdc8d7223dadae8955 186 SMART SM00072 1 182 5.9E-61 T 12-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit JDM601_2307 92113957c8ec2bbdc8d7223dadae8955 186 ProSitePatterns PS00856 Guanylate kinase-like signature. 33 50 - T 12-10-2018 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 JDM601_0733 abfc5bd0e6deda9b4f5bcf2352e6c340 336 SUPERFAMILY SSF47203 193 335 5.96E-35 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 JDM601_0733 abfc5bd0e6deda9b4f5bcf2352e6c340 336 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 17 99 5.4E-10 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 JDM601_0733 abfc5bd0e6deda9b4f5bcf2352e6c340 336 Gene3D G3DSA:1.20.140.10 195 336 1.2E-36 T 12-10-2018 JDM601_0733 abfc5bd0e6deda9b4f5bcf2352e6c340 336 SUPERFAMILY SSF56645 4 155 7.05E-17 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 JDM601_0733 abfc5bd0e6deda9b4f5bcf2352e6c340 336 Gene3D G3DSA:1.10.540.10 2 104 5.9E-16 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 JDM601_0733 abfc5bd0e6deda9b4f5bcf2352e6c340 336 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 196 335 5.3E-26 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 JDM601_2873 ebf83578b0fc2f50027a2958de7e8d4f 357 PRINTS PR00406 Cytochrome B5 reductase signature 237 245 1.1E-10 T 12-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 JDM601_2873 ebf83578b0fc2f50027a2958de7e8d4f 357 PRINTS PR00406 Cytochrome B5 reductase signature 67 78 1.1E-10 T 12-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 JDM601_2873 ebf83578b0fc2f50027a2958de7e8d4f 357 PRINTS PR00406 Cytochrome B5 reductase signature 88 95 1.1E-10 T 12-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 JDM601_2873 ebf83578b0fc2f50027a2958de7e8d4f 357 PRINTS PR00406 Cytochrome B5 reductase signature 147 166 1.1E-10 T 12-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 JDM601_2873 ebf83578b0fc2f50027a2958de7e8d4f 357 Gene3D G3DSA:2.40.30.10 39 131 2.9E-19 T 12-10-2018 JDM601_2873 ebf83578b0fc2f50027a2958de7e8d4f 357 Gene3D G3DSA:3.40.50.80 142 267 5.6E-21 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain JDM601_2873 ebf83578b0fc2f50027a2958de7e8d4f 357 SUPERFAMILY SSF63380 41 138 2.02E-21 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel JDM601_2873 ebf83578b0fc2f50027a2958de7e8d4f 357 SUPERFAMILY SSF52343 134 271 4.98E-27 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain JDM601_2873 ebf83578b0fc2f50027a2958de7e8d4f 357 SUPERFAMILY SSF54292 259 356 2.23E-15 T 12-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 JDM601_2873 ebf83578b0fc2f50027a2958de7e8d4f 357 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 282 348 7.9E-6 T 12-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 JDM601_2873 ebf83578b0fc2f50027a2958de7e8d4f 357 Gene3D G3DSA:3.10.20.30 276 357 1.3E-11 T 12-10-2018 IPR012675 Beta-grasp domain superfamily JDM601_2873 ebf83578b0fc2f50027a2958de7e8d4f 357 Pfam PF00970 Oxidoreductase FAD-binding domain 55 136 7.9E-10 T 12-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 JDM601_2873 ebf83578b0fc2f50027a2958de7e8d4f 357 Pfam PF00175 Oxidoreductase NAD-binding domain 148 251 3.9E-11 T 12-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 JDM601_2873 ebf83578b0fc2f50027a2958de7e8d4f 357 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 88 95 3.6E-8 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 JDM601_2873 ebf83578b0fc2f50027a2958de7e8d4f 357 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 187 198 3.6E-8 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 JDM601_2873 ebf83578b0fc2f50027a2958de7e8d4f 357 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 69 79 3.6E-8 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 JDM601_2873 ebf83578b0fc2f50027a2958de7e8d4f 357 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 147 166 3.6E-8 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 JDM601_2873 ebf83578b0fc2f50027a2958de7e8d4f 357 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 237 245 3.6E-8 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 JDM601_3855 c5c83c11f4ab69a80452d71c87450642 362 SUPERFAMILY SSF52343 112 245 1.44E-31 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain JDM601_3855 c5c83c11f4ab69a80452d71c87450642 362 SUPERFAMILY SSF54292 238 356 5.37E-26 T 12-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 JDM601_3855 c5c83c11f4ab69a80452d71c87450642 362 Gene3D G3DSA:3.40.50.80 123 252 2.1E-30 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain JDM601_3855 c5c83c11f4ab69a80452d71c87450642 362 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 278 351 1.4E-13 T 12-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 JDM601_3855 c5c83c11f4ab69a80452d71c87450642 362 Pfam PF00175 Oxidoreductase NAD-binding domain 132 229 1.4E-13 T 12-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 JDM601_3855 c5c83c11f4ab69a80452d71c87450642 362 SUPERFAMILY SSF63380 14 121 1.86E-22 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel JDM601_3855 c5c83c11f4ab69a80452d71c87450642 362 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 72 79 2.2E-7 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 JDM601_3855 c5c83c11f4ab69a80452d71c87450642 362 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 155 164 2.2E-7 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 JDM601_3855 c5c83c11f4ab69a80452d71c87450642 362 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 215 223 2.2E-7 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 JDM601_3855 c5c83c11f4ab69a80452d71c87450642 362 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 131 150 2.2E-7 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 JDM601_3855 c5c83c11f4ab69a80452d71c87450642 362 Gene3D G3DSA:3.10.20.30 254 362 2.8E-27 T 12-10-2018 IPR012675 Beta-grasp domain superfamily JDM601_3855 c5c83c11f4ab69a80452d71c87450642 362 PRINTS PR00410 Phenol hydroxylase reductase family signature 52 64 9.1E-10 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 JDM601_3855 c5c83c11f4ab69a80452d71c87450642 362 PRINTS PR00410 Phenol hydroxylase reductase family signature 131 150 9.1E-10 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 JDM601_3855 c5c83c11f4ab69a80452d71c87450642 362 PRINTS PR00410 Phenol hydroxylase reductase family signature 116 125 9.1E-10 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 JDM601_3855 c5c83c11f4ab69a80452d71c87450642 362 PRINTS PR00410 Phenol hydroxylase reductase family signature 215 223 9.1E-10 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 JDM601_3855 c5c83c11f4ab69a80452d71c87450642 362 Gene3D G3DSA:2.40.30.10 12 122 1.5E-24 T 12-10-2018 JDM601_3855 c5c83c11f4ab69a80452d71c87450642 362 Pfam PF00970 Oxidoreductase FAD-binding domain 46 121 1.3E-8 T 12-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 JDM601_3855 c5c83c11f4ab69a80452d71c87450642 362 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 309 317 - T 12-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 JDM601_3907 b9549b749ea4f41d66796b7c482a1090 323 SUPERFAMILY SSF82829 210 305 4.05E-11 T 12-10-2018 JDM601_3907 b9549b749ea4f41d66796b7c482a1090 323 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 10 308 18.271 T 12-10-2018 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 JDM601_3907 b9549b749ea4f41d66796b7c482a1090 323 Pfam PF09179 TilS substrate binding domain 246 301 7.3E-9 T 12-10-2018 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 JDM601_3907 b9549b749ea4f41d66796b7c482a1090 323 Pfam PF01171 PP-loop family 28 196 6.3E-28 T 12-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 JDM601_3907 b9549b749ea4f41d66796b7c482a1090 323 SUPERFAMILY SSF52402 20 230 7.07E-41 T 12-10-2018 JDM601_3907 b9549b749ea4f41d66796b7c482a1090 323 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 29 201 1.5E-33 T 12-10-2018 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 JDM601_3907 b9549b749ea4f41d66796b7c482a1090 323 Gene3D G3DSA:3.40.50.620 17 232 7.9E-55 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JDM601_0697 3771d79b308afb97e0aafccef01d22a3 396 Pfam PF03144 Elongation factor Tu domain 2 226 295 4.5E-16 T 12-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 JDM601_0697 3771d79b308afb97e0aafccef01d22a3 396 PRINTS PR00315 GTP-binding elongation factor signature 14 27 7.4E-24 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JDM601_0697 3771d79b308afb97e0aafccef01d22a3 396 PRINTS PR00315 GTP-binding elongation factor signature 96 107 7.4E-24 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JDM601_0697 3771d79b308afb97e0aafccef01d22a3 396 PRINTS PR00315 GTP-binding elongation factor signature 133 142 7.4E-24 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JDM601_0697 3771d79b308afb97e0aafccef01d22a3 396 PRINTS PR00315 GTP-binding elongation factor signature 80 90 7.4E-24 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JDM601_0697 3771d79b308afb97e0aafccef01d22a3 396 PRINTS PR00315 GTP-binding elongation factor signature 60 68 7.4E-24 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JDM601_0697 3771d79b308afb97e0aafccef01d22a3 396 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 53 68 - T 12-10-2018 IPR031157 Tr-type G domain, conserved site JDM601_0697 3771d79b308afb97e0aafccef01d22a3 396 SUPERFAMILY SSF50447 206 303 6.45E-31 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily JDM601_0697 3771d79b308afb97e0aafccef01d22a3 396 SUPERFAMILY SSF52540 4 215 1.66E-59 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_0697 3771d79b308afb97e0aafccef01d22a3 396 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 2 396 8.8E-216 T 12-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 JDM601_0697 3771d79b308afb97e0aafccef01d22a3 396 SUPERFAMILY SSF50465 304 396 1.32E-34 T 12-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal JDM601_0697 3771d79b308afb97e0aafccef01d22a3 396 Gene3D G3DSA:2.40.30.10 340 395 7.6E-29 T 12-10-2018 JDM601_0697 3771d79b308afb97e0aafccef01d22a3 396 Gene3D G3DSA:2.40.30.10 207 336 2.0E-53 T 12-10-2018 JDM601_0697 3771d79b308afb97e0aafccef01d22a3 396 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 157 1.6E-14 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 JDM601_0697 3771d79b308afb97e0aafccef01d22a3 396 Gene3D G3DSA:3.40.50.300 1 204 2.0E-69 T 12-10-2018 JDM601_0697 3771d79b308afb97e0aafccef01d22a3 396 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 396 59.039 T 12-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 JDM601_0697 3771d79b308afb97e0aafccef01d22a3 396 Pfam PF00009 Elongation factor Tu GTP binding domain 10 202 7.6E-59 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JDM601_0697 3771d79b308afb97e0aafccef01d22a3 396 Pfam PF03143 Elongation factor Tu C-terminal domain 301 394 1.4E-31 T 12-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal JDM601_3391 c3dc7c2051187c9e87db5a85389b5da0 416 Pfam PF04909 Amidohydrolase 97 400 1.2E-23 T 12-10-2018 IPR006680 Amidohydrolase-related GO:0016787 JDM601_3391 c3dc7c2051187c9e87db5a85389b5da0 416 SUPERFAMILY SSF51556 10 400 6.53E-58 T 12-10-2018 IPR032466 Metal-dependent hydrolase JDM601_3391 c3dc7c2051187c9e87db5a85389b5da0 416 Gene3D G3DSA:3.20.20.140 6 400 3.9E-105 T 12-10-2018 JDM601_2893 89af476c3b73403b12b38ee7918470a1 481 Pfam PF02470 MlaD protein 48 124 1.5E-6 T 12-10-2018 IPR003399 Mce/MlaD JDM601_2893 89af476c3b73403b12b38ee7918470a1 481 Pfam PF11887 Cholesterol uptake porter CUP1 of Mce4, putative 176 373 6.9E-21 T 12-10-2018 IPR024516 Mammalian cell entry, C-terminal JDM601_0054 198a4da5285ded7e6eadb9447c99612f 105 SUPERFAMILY SSF140453 4 99 2.88E-10 T 12-10-2018 IPR036689 ESAT-6-like superfamily JDM601_0054 198a4da5285ded7e6eadb9447c99612f 105 Pfam PF06013 Proteins of 100 residues with WXG 4 89 2.3E-11 T 12-10-2018 IPR010310 Type VII secretion system ESAT-6-like JDM601_0054 198a4da5285ded7e6eadb9447c99612f 105 Gene3D G3DSA:1.10.287.850 1 99 1.6E-7 T 12-10-2018 JDM601_0753 570bec34fb9b065e698170102c097842 186 SUPERFAMILY SSF46689 140 181 3.05E-7 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JDM601_0753 570bec34fb9b065e698170102c097842 186 SMART SM00857 3 138 4.6E-60 T 12-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 JDM601_0753 570bec34fb9b065e698170102c097842 186 SUPERFAMILY SSF53041 1 137 2.35E-45 T 12-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 JDM601_0753 570bec34fb9b065e698170102c097842 186 Gene3D G3DSA:3.40.50.1390 2 127 2.3E-47 T 12-10-2018 JDM601_0753 570bec34fb9b065e698170102c097842 186 Gene3D G3DSA:1.10.10.60 139 184 5.6E-6 T 12-10-2018 JDM601_0753 570bec34fb9b065e698170102c097842 186 Pfam PF02796 Helix-turn-helix domain of resolvase 140 183 1.7E-11 T 12-10-2018 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 JDM601_0753 570bec34fb9b065e698170102c097842 186 ProSitePatterns PS00397 Site-specific recombinases active site. 6 14 - T 12-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 JDM601_0753 570bec34fb9b065e698170102c097842 186 Pfam PF00239 Resolvase, N terminal domain 3 138 7.7E-48 T 12-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 JDM601_1491 b252d409efd5d246286ff91b08e941da 283 Gene3D G3DSA:3.40.50.10170 1 146 1.1E-34 T 12-10-2018 JDM601_1491 b252d409efd5d246286ff91b08e941da 283 Pfam PF02645 Uncharacterised protein, DegV family COG1307 3 272 1.8E-69 T 12-10-2018 IPR003797 DegV JDM601_1491 b252d409efd5d246286ff91b08e941da 283 TIGRFAM TIGR00762 DegV: EDD domain protein, DegV family 4 272 1.5E-70 T 12-10-2018 IPR003797 DegV JDM601_1491 b252d409efd5d246286ff91b08e941da 283 Gene3D G3DSA:3.30.1180.10 148 273 6.0E-31 T 12-10-2018 JDM601_1491 b252d409efd5d246286ff91b08e941da 283 SUPERFAMILY SSF82549 1 273 3.92E-67 T 12-10-2018 JDM601_3129 6c020c5923d9ac8d856cde2ae33254aa 392 SUPERFAMILY SSF53187 15 386 1.67E-73 T 12-10-2018 JDM601_3129 6c020c5923d9ac8d856cde2ae33254aa 392 Gene3D G3DSA:3.30.70.360 186 300 1.7E-109 T 12-10-2018 JDM601_3129 6c020c5923d9ac8d856cde2ae33254aa 392 Pfam PF01546 Peptidase family M20/M25/M40 78 387 1.1E-26 T 12-10-2018 IPR002933 Peptidase M20 GO:0016787 JDM601_3129 6c020c5923d9ac8d856cde2ae33254aa 392 Gene3D G3DSA:3.40.630.10 21 375 1.7E-109 T 12-10-2018 JDM601_3129 6c020c5923d9ac8d856cde2ae33254aa 392 SUPERFAMILY SSF55031 187 304 1.05E-18 T 12-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain JDM601_3129 6c020c5923d9ac8d856cde2ae33254aa 392 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 21 378 9.3E-96 T 12-10-2018 IPR017439 Amidohydrolase GO:0016787 JDM601_3129 6c020c5923d9ac8d856cde2ae33254aa 392 PIRSF PIRSF005962 11 391 7.6E-97 T 12-10-2018 IPR017439 Amidohydrolase GO:0016787 JDM601_3847 72850473dff6b8be7f557859203b03b1 365 SUPERFAMILY SSF53901 1 207 1.39E-13 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 JDM601_3847 72850473dff6b8be7f557859203b03b1 365 Gene3D G3DSA:3.40.47.10 1 362 8.7E-79 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 JDM601_3847 72850473dff6b8be7f557859203b03b1 365 SUPERFAMILY SSF53901 227 346 1.13E-14 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 JDM601_3847 72850473dff6b8be7f557859203b03b1 365 PIRSF PIRSF000429 1 322 1.0E-16 T 12-10-2018 IPR002155 Thiolase GO:0016747 JDM601_1566 8435bd09066f04b65748d90fd86cb2a1 295 SUPERFAMILY SSF64005 62 288 7.59E-82 T 12-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 JDM601_1566 8435bd09066f04b65748d90fd86cb2a1 295 Gene3D G3DSA:3.40.1180.10 23 288 7.2E-101 T 12-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 JDM601_1566 8435bd09066f04b65748d90fd86cb2a1 295 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 66 294 37.002 T 12-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 JDM601_1566 8435bd09066f04b65748d90fd86cb2a1 295 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 239 256 - T 12-10-2018 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 Reactome: R-HSA-446199|Reactome: R-HSA-4755609 JDM601_1566 8435bd09066f04b65748d90fd86cb2a1 295 Pfam PF01255 Putative undecaprenyl diphosphate synthase 73 293 1.1E-72 T 12-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 JDM601_1566 8435bd09066f04b65748d90fd86cb2a1 295 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 66 293 4.7E-73 T 12-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 JDM601_3240 e0a5891265ee360ce2dc035b2a141358 361 Pfam PF00583 Acetyltransferase (GNAT) family 252 336 1.2E-16 T 12-10-2018 IPR000182 GNAT domain JDM601_3240 e0a5891265ee360ce2dc035b2a141358 361 Gene3D G3DSA:3.40.630.30 218 361 4.4E-34 T 12-10-2018 JDM601_3240 e0a5891265ee360ce2dc035b2a141358 361 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 5 200 3.0E-44 T 12-10-2018 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB GO:0002949 JDM601_3240 e0a5891265ee360ce2dc035b2a141358 361 Gene3D G3DSA:3.30.420.40 4 133 6.6E-30 T 12-10-2018 JDM601_3240 e0a5891265ee360ce2dc035b2a141358 361 SUPERFAMILY SSF55729 107 346 2.24E-29 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase JDM601_3240 e0a5891265ee360ce2dc035b2a141358 361 SUPERFAMILY SSF53067 5 106 8.42E-18 T 12-10-2018 JDM601_3240 e0a5891265ee360ce2dc035b2a141358 361 Pfam PF00814 Glycoprotease family 39 147 4.5E-24 T 12-10-2018 IPR000905 Gcp-like domain JDM601_3240 e0a5891265ee360ce2dc035b2a141358 361 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 224 355 1.2E-32 T 12-10-2018 IPR006464 N-acetyltransferase RimI/Ard1 GO:0006474|GO:0016407 JDM601_3364 3990195ead959914b44a3959f09c4a96 403 PRINTS PR00385 P450 superfamily signature 342 351 7.4E-6 T 12-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_3364 3990195ead959914b44a3959f09c4a96 403 PRINTS PR00385 P450 superfamily signature 276 287 7.4E-6 T 12-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_3364 3990195ead959914b44a3959f09c4a96 403 PRINTS PR00385 P450 superfamily signature 351 362 7.4E-6 T 12-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_3364 3990195ead959914b44a3959f09c4a96 403 PRINTS PR00385 P450 superfamily signature 241 258 7.4E-6 T 12-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_3364 3990195ead959914b44a3959f09c4a96 403 PRINTS PR00359 B-class P450 signature 94 105 4.3E-38 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3364 3990195ead959914b44a3959f09c4a96 403 PRINTS PR00359 B-class P450 signature 158 173 4.3E-38 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3364 3990195ead959914b44a3959f09c4a96 403 PRINTS PR00359 B-class P450 signature 321 336 4.3E-38 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3364 3990195ead959914b44a3959f09c4a96 403 PRINTS PR00359 B-class P450 signature 342 351 4.3E-38 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3364 3990195ead959914b44a3959f09c4a96 403 PRINTS PR00359 B-class P450 signature 195 217 4.3E-38 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3364 3990195ead959914b44a3959f09c4a96 403 PRINTS PR00359 B-class P450 signature 276 287 4.3E-38 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3364 3990195ead959914b44a3959f09c4a96 403 PRINTS PR00359 B-class P450 signature 351 362 4.3E-38 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3364 3990195ead959914b44a3959f09c4a96 403 PRINTS PR00359 B-class P450 signature 293 320 4.3E-38 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3364 3990195ead959914b44a3959f09c4a96 403 PRINTS PR00359 B-class P450 signature 141 157 4.3E-38 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3364 3990195ead959914b44a3959f09c4a96 403 Gene3D G3DSA:1.10.630.10 3 403 9.2E-103 T 12-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_3364 3990195ead959914b44a3959f09c4a96 403 Pfam PF00067 Cytochrome P450 188 371 1.3E-25 T 12-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_3364 3990195ead959914b44a3959f09c4a96 403 SUPERFAMILY SSF48264 18 403 2.1E-86 T 12-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_1482 62622304dd0d3192d112d6b9f02fd39d 302 SMART SM00382 48 216 1.6E-5 T 12-10-2018 IPR003593 AAA+ ATPase domain JDM601_1482 62622304dd0d3192d112d6b9f02fd39d 302 Pfam PF07728 AAA domain (dynein-related subfamily) 52 205 2.6E-10 T 12-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 JDM601_1482 62622304dd0d3192d112d6b9f02fd39d 302 SUPERFAMILY SSF52540 46 291 6.19E-33 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_1912 b00914dc4737fcade5171268857d34dc 219 Gene3D G3DSA:2.40.10.10 32 105 5.2E-11 T 12-10-2018 JDM601_1912 b00914dc4737fcade5171268857d34dc 219 SUPERFAMILY SSF50494 52 196 2.69E-16 T 12-10-2018 IPR009003 Peptidase S1, PA clan JDM601_1912 b00914dc4737fcade5171268857d34dc 219 Gene3D G3DSA:2.40.10.10 106 175 5.2E-11 T 12-10-2018 JDM601_0942 3e90c637802edff2ee06a2b618754879 423 Pfam PF03453 MoeA N-terminal region (domain I and II) 3 178 9.5E-40 T 12-10-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 JDM601_0942 3e90c637802edff2ee06a2b618754879 423 Gene3D G3DSA:2.40.340.10 340 416 2.6E-20 T 12-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 JDM601_0942 3e90c637802edff2ee06a2b618754879 423 SUPERFAMILY SSF63867 340 419 2.62E-16 T 12-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 JDM601_0942 3e90c637802edff2ee06a2b618754879 423 Gene3D G3DSA:2.170.190.11 44 152 1.7E-85 T 12-10-2018 JDM601_0942 3e90c637802edff2ee06a2b618754879 423 SMART SM00852 191 330 1.2E-18 T 12-10-2018 IPR001453 MoaB/Mog domain JDM601_0942 3e90c637802edff2ee06a2b618754879 423 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 188 326 9.2E-26 T 12-10-2018 IPR001453 MoaB/Mog domain JDM601_0942 3e90c637802edff2ee06a2b618754879 423 Pfam PF03454 MoeA C-terminal region (domain IV) 343 419 7.7E-18 T 12-10-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 JDM601_0942 3e90c637802edff2ee06a2b618754879 423 SUPERFAMILY SSF53218 188 333 1.83E-29 T 12-10-2018 IPR036425 MoaB/Mog-like domain superfamily JDM601_0942 3e90c637802edff2ee06a2b618754879 423 SUPERFAMILY SSF63882 2 187 1.11E-42 T 12-10-2018 IPR036135 MoeA, N-terminal and linker domain superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 JDM601_0942 3e90c637802edff2ee06a2b618754879 423 Gene3D G3DSA:3.40.980.10 186 329 1.7E-85 T 12-10-2018 IPR036425 MoaB/Mog-like domain superfamily JDM601_0942 3e90c637802edff2ee06a2b618754879 423 Pfam PF00994 Probable molybdopterin binding domain 192 329 7.8E-18 T 12-10-2018 IPR001453 MoaB/Mog domain JDM601_0942 3e90c637802edff2ee06a2b618754879 423 Gene3D G3DSA:3.90.105.10 22 185 1.7E-85 T 12-10-2018 JDM601_2670 d6c5773d50bb71ba2bb67f83612e7d9f 1127 Gene3D G3DSA:2.40.50.100 1050 1126 2.0E-20 T 12-10-2018 JDM601_2670 d6c5773d50bb71ba2bb67f83612e7d9f 1127 Gene3D G3DSA:3.20.20.70 475 991 1.5E-231 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JDM601_2670 d6c5773d50bb71ba2bb67f83612e7d9f 1127 PIRSF PIRSF001594 1 1127 0.0 T 12-10-2018 IPR005930 Pyruvate carboxylase GO:0004736|GO:0005524|GO:0006090|GO:0006094|GO:0009374 KEGG: 00020+6.4.1.1|KEGG: 00620+6.4.1.1|KEGG: 00720+6.4.1.1|MetaCyc: PWY-5750|MetaCyc: PWY-6142|MetaCyc: PWY-6146|Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 JDM601_2670 d6c5773d50bb71ba2bb67f83612e7d9f 1127 SUPERFAMILY SSF51569 517 828 1.01E-74 T 12-10-2018 JDM601_2670 d6c5773d50bb71ba2bb67f83612e7d9f 1127 SMART SM00878 339 445 4.6E-59 T 12-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 JDM601_2670 d6c5773d50bb71ba2bb67f83612e7d9f 1127 Gene3D G3DSA:3.30.470.130 1 453 6.8E-184 T 12-10-2018 JDM601_2670 d6c5773d50bb71ba2bb67f83612e7d9f 1127 SUPERFAMILY SSF51246 334 450 5.18E-40 T 12-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 JDM601_2670 d6c5773d50bb71ba2bb67f83612e7d9f 1127 Gene3D G3DSA:3.10.600.10 458 1042 1.5E-231 T 12-10-2018 JDM601_2670 d6c5773d50bb71ba2bb67f83612e7d9f 1127 Pfam PF00364 Biotin-requiring enzyme 1068 1126 1.0E-14 T 12-10-2018 IPR000089 Biotin/lipoyl attachment JDM601_2670 d6c5773d50bb71ba2bb67f83612e7d9f 1127 SUPERFAMILY SSF89000 825 993 6.28E-39 T 12-10-2018 JDM601_2670 d6c5773d50bb71ba2bb67f83612e7d9f 1127 Pfam PF02436 Conserved carboxylase domain 820 1009 4.5E-54 T 12-10-2018 IPR003379 Carboxylase, conserved domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 JDM601_2670 d6c5773d50bb71ba2bb67f83612e7d9f 1127 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 117 323 1.4E-68 T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 JDM601_2670 d6c5773d50bb71ba2bb67f83612e7d9f 1127 SUPERFAMILY SSF52440 2 111 5.47E-41 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily JDM601_2670 d6c5773d50bb71ba2bb67f83612e7d9f 1127 SUPERFAMILY SSF51230 1050 1126 1.13E-17 T 12-10-2018 IPR011053 Single hybrid motif JDM601_2670 d6c5773d50bb71ba2bb67f83612e7d9f 1127 SUPERFAMILY SSF56059 84 355 1.47E-65 T 12-10-2018 JDM601_2670 d6c5773d50bb71ba2bb67f83612e7d9f 1127 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 1083 1100 - T 12-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 JDM601_2670 d6c5773d50bb71ba2bb67f83612e7d9f 1127 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 JDM601_2670 d6c5773d50bb71ba2bb67f83612e7d9f 1127 Pfam PF00289 Biotin carboxylase, N-terminal domain 2 111 6.8E-40 T 12-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 JDM601_2670 d6c5773d50bb71ba2bb67f83612e7d9f 1127 Pfam PF00682 HMGL-like 524 795 1.6E-25 T 12-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 JDM601_2670 d6c5773d50bb71ba2bb67f83612e7d9f 1127 TIGRFAM TIGR01235 pyruv_carbox: pyruvate carboxylase 4 1126 0.0 T 12-10-2018 IPR005930 Pyruvate carboxylase GO:0004736|GO:0005524|GO:0006090|GO:0006094|GO:0009374 KEGG: 00020+6.4.1.1|KEGG: 00620+6.4.1.1|KEGG: 00720+6.4.1.1|MetaCyc: PWY-5750|MetaCyc: PWY-6142|MetaCyc: PWY-6146|Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 JDM601_2670 d6c5773d50bb71ba2bb67f83612e7d9f 1127 Pfam PF02785 Biotin carboxylase C-terminal domain 339 446 5.1E-37 T 12-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 JDM601_3024 54922cca98f9e2bc624d9a2a976c7bc2 664 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 136 148 - T 12-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 JDM601_3024 54922cca98f9e2bc624d9a2a976c7bc2 664 SUPERFAMILY SSF56112 14 275 2.63E-57 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily JDM601_3024 54922cca98f9e2bc624d9a2a976c7bc2 664 Gene3D G3DSA:3.30.200.20 15 96 3.7E-20 T 12-10-2018 JDM601_3024 54922cca98f9e2bc624d9a2a976c7bc2 664 Gene3D G3DSA:2.120.10.30 403 663 1.4E-91 T 12-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like JDM601_3024 54922cca98f9e2bc624d9a2a976c7bc2 664 Pfam PF00069 Protein kinase domain 17 264 9.6E-36 T 12-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 JDM601_3024 54922cca98f9e2bc624d9a2a976c7bc2 664 Pfam PF01436 NHL repeat 593 617 1.1E-4 T 12-10-2018 IPR001258 NHL repeat GO:0005515 JDM601_3024 54922cca98f9e2bc624d9a2a976c7bc2 664 Pfam PF01436 NHL repeat 507 527 2.1E-4 T 12-10-2018 IPR001258 NHL repeat GO:0005515 JDM601_3024 54922cca98f9e2bc624d9a2a976c7bc2 664 Pfam PF01436 NHL repeat 633 659 6.9E-5 T 12-10-2018 IPR001258 NHL repeat GO:0005515 JDM601_3024 54922cca98f9e2bc624d9a2a976c7bc2 664 Pfam PF01436 NHL repeat 549 575 1.3E-7 T 12-10-2018 IPR001258 NHL repeat GO:0005515 JDM601_3024 54922cca98f9e2bc624d9a2a976c7bc2 664 Gene3D G3DSA:1.10.510.10 98 291 1.2E-41 T 12-10-2018 JDM601_3024 54922cca98f9e2bc624d9a2a976c7bc2 664 SUPERFAMILY SSF63829 426 661 3.2E-32 T 12-10-2018 JDM601_3024 54922cca98f9e2bc624d9a2a976c7bc2 664 SMART SM00220 17 277 5.3E-40 T 12-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 JDM601_0988 ed0dd95e36387d19eebfa06b9b3834d8 429 Pfam PF03952 Enolase, N-terminal domain 4 133 2.1E-57 T 12-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 JDM601_0988 ed0dd95e36387d19eebfa06b9b3834d8 429 Hamap MF_00318 Enolase [eno]. 2 409 45.518 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 JDM601_0988 ed0dd95e36387d19eebfa06b9b3834d8 429 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 422 2.2E-203 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 JDM601_0988 ed0dd95e36387d19eebfa06b9b3834d8 429 SMART SM01192 138 423 2.1E-207 T 12-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 JDM601_0988 ed0dd95e36387d19eebfa06b9b3834d8 429 PIRSF PIRSF001400 2 422 4.2E-188 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 JDM601_0988 ed0dd95e36387d19eebfa06b9b3834d8 429 SMART SM01193 4 133 7.5E-88 T 12-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 JDM601_0988 ed0dd95e36387d19eebfa06b9b3834d8 429 SUPERFAMILY SSF54826 3 137 8.08E-52 T 12-10-2018 JDM601_0988 ed0dd95e36387d19eebfa06b9b3834d8 429 PRINTS PR00148 Enolase signature 37 51 4.6E-49 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 JDM601_0988 ed0dd95e36387d19eebfa06b9b3834d8 429 PRINTS PR00148 Enolase signature 361 378 4.6E-49 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 JDM601_0988 ed0dd95e36387d19eebfa06b9b3834d8 429 PRINTS PR00148 Enolase signature 332 346 4.6E-49 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 JDM601_0988 ed0dd95e36387d19eebfa06b9b3834d8 429 PRINTS PR00148 Enolase signature 160 173 4.6E-49 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 JDM601_0988 ed0dd95e36387d19eebfa06b9b3834d8 429 PRINTS PR00148 Enolase signature 309 320 4.6E-49 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 JDM601_0988 ed0dd95e36387d19eebfa06b9b3834d8 429 PRINTS PR00148 Enolase signature 106 122 4.6E-49 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 JDM601_0988 ed0dd95e36387d19eebfa06b9b3834d8 429 Gene3D G3DSA:3.20.20.120 127 428 9.0E-131 T 12-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily JDM601_0988 ed0dd95e36387d19eebfa06b9b3834d8 429 SUPERFAMILY SSF51604 137 419 5.17E-123 T 12-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily JDM601_0988 ed0dd95e36387d19eebfa06b9b3834d8 429 ProSitePatterns PS00164 Enolase signature. 332 345 - T 12-10-2018 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: R-HSA-70171|Reactome: R-HSA-70263 JDM601_0988 ed0dd95e36387d19eebfa06b9b3834d8 429 Gene3D G3DSA:3.30.390.10 1 126 3.7E-53 T 12-10-2018 IPR029017 Enolase-like, N-terminal JDM601_0988 ed0dd95e36387d19eebfa06b9b3834d8 429 Pfam PF00113 Enolase, C-terminal TIM barrel domain 139 418 1.2E-126 T 12-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 JDM601_3805 f5112b73d7bda6101fda009c41a1f738 375 Pfam PF13458 Periplasmic binding protein 29 343 5.6E-24 T 12-10-2018 IPR028081 Leucine-binding protein domain JDM601_3805 f5112b73d7bda6101fda009c41a1f738 375 Gene3D G3DSA:3.40.50.2300 131 264 6.8E-34 T 12-10-2018 JDM601_3805 f5112b73d7bda6101fda009c41a1f738 375 Gene3D G3DSA:3.40.50.2300 33 328 6.8E-34 T 12-10-2018 JDM601_3805 f5112b73d7bda6101fda009c41a1f738 375 SUPERFAMILY SSF53822 28 369 2.99E-36 T 12-10-2018 IPR028082 Periplasmic binding protein-like I JDM601_2747 b0520da1928c34962eb009d92a877fa8 924 Gene3D G3DSA:1.10.10.10 838 916 5.9E-18 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JDM601_2747 b0520da1928c34962eb009d92a877fa8 924 SMART SM00421 860 917 5.0E-17 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JDM601_2747 b0520da1928c34962eb009d92a877fa8 924 SUPERFAMILY SSF46894 854 914 1.53E-14 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 JDM601_2747 b0520da1928c34962eb009d92a877fa8 924 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 863 877 8.3E-8 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JDM601_2747 b0520da1928c34962eb009d92a877fa8 924 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 877 893 8.3E-8 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JDM601_2747 b0520da1928c34962eb009d92a877fa8 924 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 893 905 8.3E-8 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JDM601_2747 b0520da1928c34962eb009d92a877fa8 924 Pfam PF13191 AAA ATPase domain 13 170 4.5E-17 T 12-10-2018 JDM601_2747 b0520da1928c34962eb009d92a877fa8 924 Pfam PF00196 Bacterial regulatory proteins, luxR family 862 913 6.9E-13 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JDM601_2747 b0520da1928c34962eb009d92a877fa8 924 SUPERFAMILY SSF52540 4 229 7.24E-8 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_2201 9b1518e7e405bc2ee892c3b70f5f10cd 554 SUPERFAMILY SSF51735 8 253 4.35E-56 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_2201 9b1518e7e405bc2ee892c3b70f5f10cd 554 Gene3D G3DSA:3.40.50.720 8 254 5.3E-54 T 12-10-2018 JDM601_2201 9b1518e7e405bc2ee892c3b70f5f10cd 554 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 5.0E-24 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2201 9b1518e7e405bc2ee892c3b70f5f10cd 554 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 5.0E-24 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2201 9b1518e7e405bc2ee892c3b70f5f10cd 554 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 5.0E-24 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2201 9b1518e7e405bc2ee892c3b70f5f10cd 554 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 5.0E-24 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2201 9b1518e7e405bc2ee892c3b70f5f10cd 554 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 5.0E-24 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2201 9b1518e7e405bc2ee892c3b70f5f10cd 554 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 10 187 0.0038 T 12-10-2018 JDM601_2201 9b1518e7e405bc2ee892c3b70f5f10cd 554 Pfam PF12697 Alpha/beta hydrolase family 311 536 1.2E-22 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 JDM601_2201 9b1518e7e405bc2ee892c3b70f5f10cd 554 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 143 171 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 JDM601_2201 9b1518e7e405bc2ee892c3b70f5f10cd 554 SUPERFAMILY SSF53474 302 551 1.07E-36 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_2201 9b1518e7e405bc2ee892c3b70f5f10cd 554 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 4.1E-9 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2201 9b1518e7e405bc2ee892c3b70f5f10cd 554 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 4.1E-9 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2201 9b1518e7e405bc2ee892c3b70f5f10cd 554 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 4.1E-9 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2201 9b1518e7e405bc2ee892c3b70f5f10cd 554 Pfam PF00106 short chain dehydrogenase 11 194 7.4E-44 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2201 9b1518e7e405bc2ee892c3b70f5f10cd 554 Gene3D G3DSA:3.40.50.1820 298 550 3.5E-38 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_2281 4d356c9c56f0cd21fec4f00dfdc8f1b4 311 PIRSF PIRSF005052 23 311 3.6E-110 T 12-10-2018 IPR005337 RapZ-like family GO:0005524 JDM601_2281 4d356c9c56f0cd21fec4f00dfdc8f1b4 311 Pfam PF03668 P-loop ATPase protein family 23 311 3.0E-122 T 12-10-2018 IPR005337 RapZ-like family GO:0005524 JDM601_2281 4d356c9c56f0cd21fec4f00dfdc8f1b4 311 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 23 310 40.343 T 12-10-2018 IPR005337 RapZ-like family GO:0005524 JDM601_2281 4d356c9c56f0cd21fec4f00dfdc8f1b4 311 SUPERFAMILY SSF52540 25 175 4.75E-12 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_3411 be976ea4a884254bb5a7af4071976c20 387 SUPERFAMILY SSF56645 5 241 8.12E-65 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 JDM601_3411 be976ea4a884254bb5a7af4071976c20 387 SUPERFAMILY SSF47203 231 381 5.32E-48 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 JDM601_3411 be976ea4a884254bb5a7af4071976c20 387 PIRSF PIRSF016578 2 379 1.0E-12 T 12-10-2018 JDM601_3411 be976ea4a884254bb5a7af4071976c20 387 Gene3D G3DSA:2.40.110.10 122 234 2.8E-33 T 12-10-2018 JDM601_3411 be976ea4a884254bb5a7af4071976c20 387 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 233 378 2.4E-42 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 JDM601_3411 be976ea4a884254bb5a7af4071976c20 387 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 7 118 2.2E-25 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 JDM601_3411 be976ea4a884254bb5a7af4071976c20 387 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 122 218 1.7E-24 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 JDM601_3411 be976ea4a884254bb5a7af4071976c20 387 Gene3D G3DSA:1.10.540.10 2 119 2.8E-26 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 JDM601_3411 be976ea4a884254bb5a7af4071976c20 387 Gene3D G3DSA:1.20.140.10 235 382 2.4E-46 T 12-10-2018 JDM601_3084 5afb4e9626417d218e9b5fa225b4e276 311 SUPERFAMILY SSF53474 40 306 3.37E-28 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_3084 5afb4e9626417d218e9b5fa225b4e276 311 Gene3D G3DSA:3.40.50.1820 35 307 7.0E-78 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_3084 5afb4e9626417d218e9b5fa225b4e276 311 Pfam PF00756 Putative esterase 45 301 4.4E-57 T 12-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 JDM601_0491 42a4b81d834cf8b526d71adbab24ccf1 313 Gene3D G3DSA:3.30.420.40 6 284 2.2E-65 T 12-10-2018 JDM601_0491 42a4b81d834cf8b526d71adbab24ccf1 313 SUPERFAMILY SSF53067 114 290 3.04E-35 T 12-10-2018 JDM601_0491 42a4b81d834cf8b526d71adbab24ccf1 313 SUPERFAMILY SSF53067 5 109 1.81E-21 T 12-10-2018 JDM601_0491 42a4b81d834cf8b526d71adbab24ccf1 313 Pfam PF02541 Ppx/GppA phosphatase family 1 290 1.7E-87 T 12-10-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 JDM601_0491 42a4b81d834cf8b526d71adbab24ccf1 313 Gene3D G3DSA:3.30.420.150 92 277 2.2E-65 T 12-10-2018 JDM601_0258 a3c1f3ea3201431eda02eba5315f4253 556 Gene3D G3DSA:3.30.300.310 459 556 1.3E-32 T 12-10-2018 JDM601_0258 a3c1f3ea3201431eda02eba5315f4253 556 ProSitePatterns PS00455 Putative AMP-binding domain signature. 220 231 - T 12-10-2018 IPR020845 AMP-binding, conserved site JDM601_0258 a3c1f3ea3201431eda02eba5315f4253 556 Gene3D G3DSA:3.40.50.12780 60 456 2.0E-81 T 12-10-2018 JDM601_0258 a3c1f3ea3201431eda02eba5315f4253 556 SUPERFAMILY SSF56801 66 555 1.83E-123 T 12-10-2018 JDM601_0258 a3c1f3ea3201431eda02eba5315f4253 556 Pfam PF00501 AMP-binding enzyme 66 463 2.3E-72 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 JDM601_0258 a3c1f3ea3201431eda02eba5315f4253 556 Pfam PF13193 AMP-binding enzyme C-terminal domain 472 547 1.1E-18 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain JDM601_2842 c771c4cc224a1256894685bad08a3590 230 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JDM601_2842 c771c4cc224a1256894685bad08a3590 230 TIGRFAM TIGR02673 FtsE: cell division ATP-binding protein FtsE 2 215 4.3E-87 T 12-10-2018 IPR005286 Cell division protein FtsE, ATP-binding GO:0005524|GO:0051301 JDM601_2842 c771c4cc224a1256894685bad08a3590 230 Pfam PF00005 ABC transporter 20 167 4.5E-34 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JDM601_2842 c771c4cc224a1256894685bad08a3590 230 SMART SM00382 29 216 8.2E-16 T 12-10-2018 IPR003593 AAA+ ATPase domain JDM601_2842 c771c4cc224a1256894685bad08a3590 230 Gene3D G3DSA:3.40.50.300 1 226 3.7E-66 T 12-10-2018 JDM601_2842 c771c4cc224a1256894685bad08a3590 230 SUPERFAMILY SSF52540 2 221 5.45E-68 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_2010 f5d4dfa6e1edc8b1441c2b3a061da7ad 956 SUPERFAMILY SSF82866 714 923 1.22E-27 T 12-10-2018 JDM601_2010 f5d4dfa6e1edc8b1441c2b3a061da7ad 956 TIGRFAM TIGR00833 actII: transport protein 17 923 1.6E-298 T 12-10-2018 IPR004707 Membrane transport protein MmpL family GO:0016021 JDM601_2010 f5d4dfa6e1edc8b1441c2b3a061da7ad 956 SUPERFAMILY SSF82866 131 348 3.92E-25 T 12-10-2018 JDM601_2010 f5d4dfa6e1edc8b1441c2b3a061da7ad 956 Pfam PF03176 MMPL family 596 924 4.1E-93 T 12-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 JDM601_2010 f5d4dfa6e1edc8b1441c2b3a061da7ad 956 Pfam PF03176 MMPL family 51 376 8.8E-100 T 12-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 JDM601_4081 1a69eb9ed655408fd9a465b209b9d757 267 SMART SM00382 61 248 1.1E-5 T 12-10-2018 IPR003593 AAA+ ATPase domain JDM601_4081 1a69eb9ed655408fd9a465b209b9d757 267 Gene3D G3DSA:3.40.50.300 41 266 3.7E-38 T 12-10-2018 JDM601_4081 1a69eb9ed655408fd9a465b209b9d757 267 SUPERFAMILY SSF52540 50 247 1.97E-39 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_4081 1a69eb9ed655408fd9a465b209b9d757 267 Pfam PF00005 ABC transporter 52 182 9.0E-18 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JDM601_0512 224cb255ee1faa2234b61bedc299fed1 707 Pfam PF00403 Heavy-metal-associated domain 12 68 1.3E-12 T 12-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 JDM601_0512 224cb255ee1faa2234b61bedc299fed1 707 Gene3D G3DSA:3.40.1110.10 428 530 1.4E-74 T 12-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 JDM601_0512 224cb255ee1faa2234b61bedc299fed1 707 Gene3D G3DSA:3.30.70.100 8 72 2.1E-18 T 12-10-2018 JDM601_0512 224cb255ee1faa2234b61bedc299fed1 707 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 134 703 4.0E-160 T 12-10-2018 JDM601_0512 224cb255ee1faa2234b61bedc299fed1 707 SUPERFAMILY SSF56784 415 700 2.74E-53 T 12-10-2018 IPR036412 HAD-like superfamily JDM601_0512 224cb255ee1faa2234b61bedc299fed1 707 Gene3D G3DSA:3.40.50.1000 398 652 1.4E-74 T 12-10-2018 IPR023214 HAD superfamily JDM601_0512 224cb255ee1faa2234b61bedc299fed1 707 PRINTS PR00943 Copper-transporting ATPase signature 49 69 9.7E-10 T 12-10-2018 JDM601_0512 224cb255ee1faa2234b61bedc299fed1 707 PRINTS PR00943 Copper-transporting ATPase signature 577 594 9.7E-10 T 12-10-2018 JDM601_0512 224cb255ee1faa2234b61bedc299fed1 707 PRINTS PR00943 Copper-transporting ATPase signature 340 354 9.7E-10 T 12-10-2018 JDM601_0512 224cb255ee1faa2234b61bedc299fed1 707 PRINTS PR00943 Copper-transporting ATPase signature 183 202 9.7E-10 T 12-10-2018 JDM601_0512 224cb255ee1faa2234b61bedc299fed1 707 PRINTS PR00943 Copper-transporting ATPase signature 400 415 9.7E-10 T 12-10-2018 JDM601_0512 224cb255ee1faa2234b61bedc299fed1 707 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 545 555 1.4E-24 T 12-10-2018 JDM601_0512 224cb255ee1faa2234b61bedc299fed1 707 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 267 281 1.4E-24 T 12-10-2018 JDM601_0512 224cb255ee1faa2234b61bedc299fed1 707 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 623 635 1.4E-24 T 12-10-2018 JDM601_0512 224cb255ee1faa2234b61bedc299fed1 707 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 600 619 1.4E-24 T 12-10-2018 JDM601_0512 224cb255ee1faa2234b61bedc299fed1 707 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 417 431 1.4E-24 T 12-10-2018 JDM601_0512 224cb255ee1faa2234b61bedc299fed1 707 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 523 534 1.4E-24 T 12-10-2018 JDM601_0512 224cb255ee1faa2234b61bedc299fed1 707 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 186 683 4.0E-76 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 JDM601_0512 224cb255ee1faa2234b61bedc299fed1 707 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 168 703 4.3E-119 T 12-10-2018 JDM601_0512 224cb255ee1faa2234b61bedc299fed1 707 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 152 702 3.7E-170 T 12-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 JDM601_0512 224cb255ee1faa2234b61bedc299fed1 707 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 419 425 - T 12-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 JDM601_0512 224cb255ee1faa2234b61bedc299fed1 707 ProSitePatterns PS01047 Heavy-metal-associated domain. 12 40 - T 12-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 JDM601_0512 224cb255ee1faa2234b61bedc299fed1 707 SUPERFAMILY SSF81653 230 317 9.55E-24 T 12-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 JDM601_0512 224cb255ee1faa2234b61bedc299fed1 707 SUPERFAMILY SSF81665 164 409 2.09E-12 T 12-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 JDM601_0512 224cb255ee1faa2234b61bedc299fed1 707 Pfam PF00702 haloacid dehalogenase-like hydrolase 413 614 4.1E-38 T 12-10-2018 JDM601_0512 224cb255ee1faa2234b61bedc299fed1 707 SUPERFAMILY SSF55008 3 73 2.36E-18 T 12-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 JDM601_0512 224cb255ee1faa2234b61bedc299fed1 707 Pfam PF00122 E1-E2 ATPase 218 395 3.6E-51 T 12-10-2018 JDM601_0512 224cb255ee1faa2234b61bedc299fed1 707 Gene3D G3DSA:2.70.150.20 201 321 5.6E-36 T 12-10-2018 JDM601_2419 4a075bfa5e1ab62035dac5d1487bf25a 397 Pfam PF09594 Glycosyltransferase family 87 55 289 2.6E-40 T 12-10-2018 IPR018584 Glycosyltransferase family 87 GO:0016758 JDM601_4296 99293e5b31e5db6241a564c2f2f96c7c 326 Pfam PF08237 PE-PPE domain 101 219 6.4E-10 T 12-10-2018 IPR013228 PE-PPE, C-terminal JDM601_4296 99293e5b31e5db6241a564c2f2f96c7c 326 SUPERFAMILY SSF53474 70 243 1.04E-10 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_4296 99293e5b31e5db6241a564c2f2f96c7c 326 Gene3D G3DSA:3.40.50.1820 39 233 3.1E-10 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_0671 2d7a4b61898ddf85604233c600ec5825 1395 Gene3D G3DSA:3.20.110.10 86 385 7.0E-50 T 12-10-2018 IPR027291 Glycoside hydrolase 38, N-terminal domain superfamily JDM601_0671 2d7a4b61898ddf85604233c600ec5825 1395 SUPERFAMILY SSF88688 392 490 7.52E-20 T 12-10-2018 IPR028995 Glycoside hydrolase families 57/38, central domain superfamily JDM601_0671 2d7a4b61898ddf85604233c600ec5825 1395 Pfam PF10633 NPCBM-associated, NEW3 domain of alpha-galactosidase 1183 1257 1.6E-14 T 12-10-2018 IPR018905 Alpha-galactosidase, NEW3 domain JDM601_0671 2d7a4b61898ddf85604233c600ec5825 1395 Gene3D G3DSA:1.20.1270.50 397 492 1.3E-14 T 12-10-2018 IPR037094 Glycoside hydrolase family 38, central domain superfamily GO:0004559|GO:0006013 JDM601_0671 2d7a4b61898ddf85604233c600ec5825 1395 Pfam PF07748 Glycosyl hydrolases family 38 C-terminal domain 502 713 1.7E-6 T 12-10-2018 IPR011682 Glycosyl hydrolase family 38, C-terminal GO:0004559|GO:0006013 JDM601_0671 2d7a4b61898ddf85604233c600ec5825 1395 Pfam PF01074 Glycosyl hydrolases family 38 N-terminal domain 90 394 9.8E-67 T 12-10-2018 IPR000602 Glycoside hydrolase family 38, N-terminal domain GO:0004559|GO:0006013 JDM601_0671 2d7a4b61898ddf85604233c600ec5825 1395 Pfam PF09261 Alpha mannosidase middle domain 393 468 1.8E-13 T 12-10-2018 IPR015341 Glycoside hydrolase family 38, central domain GO:0004559|GO:0006013 JDM601_0671 2d7a4b61898ddf85604233c600ec5825 1395 SUPERFAMILY SSF74650 496 730 4.71E-30 T 12-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 JDM601_0671 2d7a4b61898ddf85604233c600ec5825 1395 SUPERFAMILY SSF88713 84 392 1.02E-53 T 12-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 JDM601_0671 2d7a4b61898ddf85604233c600ec5825 1395 SUPERFAMILY SSF74650 927 1109 6.28E-5 T 12-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 JDM601_0671 2d7a4b61898ddf85604233c600ec5825 1395 SMART SM00872 392 470 9.0E-18 T 12-10-2018 IPR015341 Glycoside hydrolase family 38, central domain GO:0004559|GO:0006013 JDM601_0671 2d7a4b61898ddf85604233c600ec5825 1395 Gene3D G3DSA:2.60.40.10 1166 1264 2.4E-5 T 12-10-2018 IPR013783 Immunoglobulin-like fold JDM601_2805 e3579b986c1b25ce3948b08cd4fe2b0f 230 Pfam PF00392 Bacterial regulatory proteins, gntR family 2 38 4.3E-9 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 JDM601_2805 e3579b986c1b25ce3948b08cd4fe2b0f 230 Gene3D G3DSA:1.20.120.530 53 205 4.1E-21 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal JDM601_2805 e3579b986c1b25ce3948b08cd4fe2b0f 230 Gene3D G3DSA:1.10.10.10 1 52 5.7E-9 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JDM601_2805 e3579b986c1b25ce3948b08cd4fe2b0f 230 SUPERFAMILY SSF46785 2 48 3.5E-7 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JDM601_2805 e3579b986c1b25ce3948b08cd4fe2b0f 230 SMART SM00895 69 201 1.2E-12 T 12-10-2018 IPR011711 GntR, C-terminal JDM601_2805 e3579b986c1b25ce3948b08cd4fe2b0f 230 SUPERFAMILY SSF48008 67 204 6.02E-15 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal JDM601_2805 e3579b986c1b25ce3948b08cd4fe2b0f 230 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 16 32 1.1E-6 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 JDM601_2805 e3579b986c1b25ce3948b08cd4fe2b0f 230 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 2 16 1.1E-6 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 JDM601_2805 e3579b986c1b25ce3948b08cd4fe2b0f 230 Pfam PF07729 FCD domain 73 200 5.5E-15 T 12-10-2018 IPR011711 GntR, C-terminal JDM601_0182 0b5f8b74e305a997484cd00f8c107fa9 322 SUPERFAMILY SSF54637 4 152 1.34E-28 T 12-10-2018 IPR029069 HotDog domain superfamily JDM601_0182 0b5f8b74e305a997484cd00f8c107fa9 322 SUPERFAMILY SSF54637 205 321 2.24E-25 T 12-10-2018 IPR029069 HotDog domain superfamily JDM601_0182 0b5f8b74e305a997484cd00f8c107fa9 322 PIRSF PIRSF021494 2 322 4.8E-122 T 12-10-2018 IPR016790 Thiol ester hydratase, Rv0216, predicted KEGG: 00630+4.2.1.148|KEGG: 00660+4.2.1.148|KEGG: 00720+4.2.1.148|MetaCyc: PWY-5741|MetaCyc: PWY-5744|MetaCyc: PWY-6728|MetaCyc: PWY-7854 JDM601_0182 0b5f8b74e305a997484cd00f8c107fa9 322 Gene3D G3DSA:3.10.129.10 2 152 7.9E-35 T 12-10-2018 JDM601_0182 0b5f8b74e305a997484cd00f8c107fa9 322 Gene3D G3DSA:3.10.129.10 181 322 8.6E-47 T 12-10-2018 JDM601_4337 fac66354dd71cf99cabc2b2a9625149f 331 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 150 168 2.2E-38 T 12-10-2018 JDM601_4337 fac66354dd71cf99cabc2b2a9625149f 331 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 10 29 2.2E-38 T 12-10-2018 JDM601_4337 fac66354dd71cf99cabc2b2a9625149f 331 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 108 126 2.2E-38 T 12-10-2018 JDM601_4337 fac66354dd71cf99cabc2b2a9625149f 331 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 234 250 2.2E-38 T 12-10-2018 JDM601_4337 fac66354dd71cf99cabc2b2a9625149f 331 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 261 283 2.2E-38 T 12-10-2018 JDM601_4337 fac66354dd71cf99cabc2b2a9625149f 331 SUPERFAMILY SSF51905 3 308 3.56E-56 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_4337 fac66354dd71cf99cabc2b2a9625149f 331 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 297 7.4E-49 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JDM601_4337 fac66354dd71cf99cabc2b2a9625149f 331 Gene3D G3DSA:3.50.50.60 9 302 2.1E-127 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_4337 fac66354dd71cf99cabc2b2a9625149f 331 Gene3D G3DSA:3.50.50.60 120 242 2.1E-127 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_4337 fac66354dd71cf99cabc2b2a9625149f 331 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 8 308 1.8E-123 T 12-10-2018 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00450+1.8.1.9 JDM601_4337 fac66354dd71cf99cabc2b2a9625149f 331 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 42 57 3.4E-78 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 JDM601_4337 fac66354dd71cf99cabc2b2a9625149f 331 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 271 289 3.4E-78 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 JDM601_4337 fac66354dd71cf99cabc2b2a9625149f 331 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 109 117 3.4E-78 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 JDM601_4337 fac66354dd71cf99cabc2b2a9625149f 331 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 146 170 3.4E-78 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 JDM601_4337 fac66354dd71cf99cabc2b2a9625149f 331 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 9 31 3.4E-78 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 JDM601_4337 fac66354dd71cf99cabc2b2a9625149f 331 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 236 257 3.4E-78 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 JDM601_4337 fac66354dd71cf99cabc2b2a9625149f 331 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 131 143 3.4E-78 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 JDM601_4337 fac66354dd71cf99cabc2b2a9625149f 331 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 63 73 3.4E-78 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 JDM601_4337 fac66354dd71cf99cabc2b2a9625149f 331 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 198 214 3.4E-78 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 JDM601_4337 fac66354dd71cf99cabc2b2a9625149f 331 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 138 158 - T 12-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 JDM601_2114 964449d11923bf1a0eb7408e93fa3d0d 928 Gene3D G3DSA:3.40.50.300 8 197 3.2E-59 T 12-10-2018 JDM601_2114 964449d11923bf1a0eb7408e93fa3d0d 928 SUPERFAMILY SSF52540 35 443 2.09E-41 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_2114 964449d11923bf1a0eb7408e93fa3d0d 928 Pfam PF00271 Helicase conserved C-terminal domain 357 429 3.2E-4 T 12-10-2018 IPR001650 Helicase, C-terminal JDM601_2114 964449d11923bf1a0eb7408e93fa3d0d 928 SMART SM00490 344 429 2.3E-12 T 12-10-2018 IPR001650 Helicase, C-terminal JDM601_2114 964449d11923bf1a0eb7408e93fa3d0d 928 SMART SM00487 20 202 9.3E-28 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain JDM601_2114 964449d11923bf1a0eb7408e93fa3d0d 928 SMART SM01142 745 928 2.2E-64 T 12-10-2018 IPR012961 ATP-dependent RNA helicase Ski2, C-terminal JDM601_2114 964449d11923bf1a0eb7408e93fa3d0d 928 Pfam PF00270 DEAD/DEAH box helicase 26 173 1.6E-16 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 JDM601_2114 964449d11923bf1a0eb7408e93fa3d0d 928 Gene3D G3DSA:1.10.3380.30 700 920 8.8E-15 T 12-10-2018 JDM601_2114 964449d11923bf1a0eb7408e93fa3d0d 928 Gene3D G3DSA:3.40.50.300 198 459 4.6E-52 T 12-10-2018 JDM601_2114 964449d11923bf1a0eb7408e93fa3d0d 928 Pfam PF08148 DSHCT (NUC185) domain 749 923 5.6E-39 T 12-10-2018 IPR012961 ATP-dependent RNA helicase Ski2, C-terminal JDM601_1341 c9a30de659ed36f70f7adb2cc18dd05c 268 Gene3D G3DSA:3.40.50.1860 2 250 7.2E-94 T 12-10-2018 JDM601_1341 c9a30de659ed36f70f7adb2cc18dd05c 268 Hamap MF_00258 Glutamate racemase [murI]. 1 252 35.492 T 12-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 JDM601_1341 c9a30de659ed36f70f7adb2cc18dd05c 268 Pfam PF01177 Asp/Glu/Hydantoin racemase 2 210 3.9E-34 T 12-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 JDM601_1341 c9a30de659ed36f70f7adb2cc18dd05c 268 TIGRFAM TIGR00067 glut_race: glutamate racemase 2 248 1.0E-67 T 12-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 JDM601_1341 c9a30de659ed36f70f7adb2cc18dd05c 268 SUPERFAMILY SSF53681 105 254 1.64E-39 T 12-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 JDM601_1341 c9a30de659ed36f70f7adb2cc18dd05c 268 SUPERFAMILY SSF53681 2 103 3.6E-33 T 12-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 JDM601_1341 c9a30de659ed36f70f7adb2cc18dd05c 268 Gene3D G3DSA:3.40.50.1860 91 202 7.2E-94 T 12-10-2018 JDM601_1341 c9a30de659ed36f70f7adb2cc18dd05c 268 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 175 185 - T 12-10-2018 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 JDM601_1341 c9a30de659ed36f70f7adb2cc18dd05c 268 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 66 74 - T 12-10-2018 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 JDM601_0904 30fa431fc584fa01a9d286a3f7da2d52 203 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 7 192 7.7E-66 T 12-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 JDM601_0904 30fa431fc584fa01a9d286a3f7da2d52 203 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 8 191 27.646 T 12-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 JDM601_0904 30fa431fc584fa01a9d286a3f7da2d52 203 Gene3D G3DSA:3.40.50.170 1 203 1.0E-80 T 12-10-2018 JDM601_0904 30fa431fc584fa01a9d286a3f7da2d52 203 Pfam PF00551 Formyl transferase 8 185 9.2E-44 T 12-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 JDM601_0904 30fa431fc584fa01a9d286a3f7da2d52 203 SUPERFAMILY SSF53328 8 201 2.49E-55 T 12-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 JDM601_2930 a9f780eabafcfc142fc465ed996886c0 371 SUPERFAMILY SSF56322 66 362 3.14E-82 T 12-10-2018 IPR005801 ADC synthase GO:0009058 JDM601_2930 a9f780eabafcfc142fc465ed996886c0 371 TIGRFAM TIGR00543 isochor_syn: isochorismate synthase 86 360 2.2E-73 T 12-10-2018 IPR004561 Isochorismate synthase GO:0008909|GO:0009058 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 JDM601_2930 a9f780eabafcfc142fc465ed996886c0 371 Gene3D G3DSA:3.60.120.10 2 363 1.4E-107 T 12-10-2018 IPR005801 ADC synthase GO:0009058 JDM601_2930 a9f780eabafcfc142fc465ed996886c0 371 Pfam PF00425 chorismate binding enzyme 89 352 5.3E-69 T 12-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal JDM601_1675 f277c2b1a32748aad4bf6645d2981c31 244 Pfam PF02548 Ketopantoate hydroxymethyltransferase 1 239 2.2E-101 T 12-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 JDM601_1675 f277c2b1a32748aad4bf6645d2981c31 244 PIRSF PIRSF000388 1 244 2.1E-107 T 12-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 JDM601_1675 f277c2b1a32748aad4bf6645d2981c31 244 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 1 244 38.799 T 12-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 JDM601_1675 f277c2b1a32748aad4bf6645d2981c31 244 SUPERFAMILY SSF51621 1 243 3.93E-95 T 12-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 JDM601_1675 f277c2b1a32748aad4bf6645d2981c31 244 Gene3D G3DSA:3.20.20.60 1 244 2.0E-104 T 12-10-2018 JDM601_1675 f277c2b1a32748aad4bf6645d2981c31 244 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 1 244 3.0E-90 T 12-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 JDM601_3734 d6f6df1c8fa8f0077b5b58954e947075 394 Pfam PF00067 Cytochrome P450 195 358 1.3E-23 T 12-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_3734 d6f6df1c8fa8f0077b5b58954e947075 394 PRINTS PR00385 P450 superfamily signature 338 349 1.7E-7 T 12-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_3734 d6f6df1c8fa8f0077b5b58954e947075 394 PRINTS PR00385 P450 superfamily signature 329 338 1.7E-7 T 12-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_3734 d6f6df1c8fa8f0077b5b58954e947075 394 PRINTS PR00385 P450 superfamily signature 225 242 1.7E-7 T 12-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_3734 d6f6df1c8fa8f0077b5b58954e947075 394 PRINTS PR00385 P450 superfamily signature 260 271 1.7E-7 T 12-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_3734 d6f6df1c8fa8f0077b5b58954e947075 394 SUPERFAMILY SSF48264 18 389 1.31E-86 T 12-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_3734 d6f6df1c8fa8f0077b5b58954e947075 394 PRINTS PR00359 B-class P450 signature 78 89 1.1E-43 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3734 d6f6df1c8fa8f0077b5b58954e947075 394 PRINTS PR00359 B-class P450 signature 179 201 1.1E-43 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3734 d6f6df1c8fa8f0077b5b58954e947075 394 PRINTS PR00359 B-class P450 signature 338 349 1.1E-43 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3734 d6f6df1c8fa8f0077b5b58954e947075 394 PRINTS PR00359 B-class P450 signature 329 338 1.1E-43 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3734 d6f6df1c8fa8f0077b5b58954e947075 394 PRINTS PR00359 B-class P450 signature 305 320 1.1E-43 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3734 d6f6df1c8fa8f0077b5b58954e947075 394 PRINTS PR00359 B-class P450 signature 141 156 1.1E-43 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3734 d6f6df1c8fa8f0077b5b58954e947075 394 PRINTS PR00359 B-class P450 signature 124 140 1.1E-43 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3734 d6f6df1c8fa8f0077b5b58954e947075 394 PRINTS PR00359 B-class P450 signature 260 271 1.1E-43 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3734 d6f6df1c8fa8f0077b5b58954e947075 394 PRINTS PR00359 B-class P450 signature 277 304 1.1E-43 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3734 d6f6df1c8fa8f0077b5b58954e947075 394 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 331 340 - T 12-10-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 JDM601_3734 d6f6df1c8fa8f0077b5b58954e947075 394 Gene3D G3DSA:1.10.630.10 3 393 1.7E-112 T 12-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_2090 2e32683cdae472a204062026937e6d99 293 SUPERFAMILY SSF88946 3 87 5.1E-13 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 JDM601_2090 2e32683cdae472a204062026937e6d99 293 Pfam PF08281 Sigma-70, region 4 105 157 8.7E-10 T 12-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 JDM601_2090 2e32683cdae472a204062026937e6d99 293 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 8 157 1.1E-14 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 JDM601_2090 2e32683cdae472a204062026937e6d99 293 SUPERFAMILY SSF88659 102 158 1.44E-10 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like JDM601_2090 2e32683cdae472a204062026937e6d99 293 SUPERFAMILY SSF54427 170 289 3.76E-9 T 12-10-2018 IPR032710 NTF2-like domain superfamily JDM601_2090 2e32683cdae472a204062026937e6d99 293 Gene3D G3DSA:1.10.1740.10 3 78 3.2E-10 T 12-10-2018 JDM601_2090 2e32683cdae472a204062026937e6d99 293 Pfam PF04542 Sigma-70 region 2 11 76 2.2E-11 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 JDM601_2090 2e32683cdae472a204062026937e6d99 293 Gene3D G3DSA:1.10.10.10 87 160 9.2E-11 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JDM601_2973 ce4bff97bc921b71326aaf9ef3ee2197 221 Gene3D G3DSA:3.40.50.2020 86 221 1.5E-12 T 12-10-2018 JDM601_2973 ce4bff97bc921b71326aaf9ef3ee2197 221 SUPERFAMILY SSF53271 52 220 1.28E-16 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like JDM601_2973 ce4bff97bc921b71326aaf9ef3ee2197 221 Pfam PF00156 Phosphoribosyl transferase domain 168 219 1.1E-7 T 12-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 JDM601_2897 cc9e2969e1474d498f829543fed81f22 371 TIGRFAM TIGR00996 Mtu_fam_mce: virulence factor Mce family protein 17 285 1.2E-41 T 12-10-2018 IPR005693 Virulence factor Mce protein JDM601_2897 cc9e2969e1474d498f829543fed81f22 371 Pfam PF02470 MlaD protein 44 118 2.0E-12 T 12-10-2018 IPR003399 Mce/MlaD JDM601_1279 dfeffa0d90ccdcd8904b8c9f5382bd01 315 Hamap MF_00064 Sulfate adenylyltransferase subunit 2 [cysD]. 20 315 53.934 T 12-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 JDM601_1279 dfeffa0d90ccdcd8904b8c9f5382bd01 315 Gene3D G3DSA:3.40.50.620 23 225 6.9E-56 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JDM601_1279 dfeffa0d90ccdcd8904b8c9f5382bd01 315 PIRSF PIRSF002936 16 315 6.9E-138 T 12-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 JDM601_1279 dfeffa0d90ccdcd8904b8c9f5382bd01 315 TIGRFAM TIGR02039 CysD: sulfate adenylyltransferase, small subunit 25 315 3.8E-143 T 12-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 JDM601_1279 dfeffa0d90ccdcd8904b8c9f5382bd01 315 SUPERFAMILY SSF52402 20 223 7.06E-64 T 12-10-2018 JDM601_1279 dfeffa0d90ccdcd8904b8c9f5382bd01 315 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 46 268 2.6E-48 T 12-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 JDM601_3858 f338426a27c6ad8ea7b4f481b666e35f 761 Gene3D G3DSA:3.30.1590.10 92 210 1.1E-140 T 12-10-2018 JDM601_3858 f338426a27c6ad8ea7b4f481b666e35f 761 TIGRFAM TIGR02401 trehalose_TreY: malto-oligosyltrehalose synthase 2 757 2.9E-266 T 12-10-2018 IPR012767 Maltooligosyl trehalose synthase KEGG: 00500+5.4.99.15|MetaCyc: PWY-2661 JDM601_3858 f338426a27c6ad8ea7b4f481b666e35f 761 Gene3D G3DSA:3.20.20.80 3 646 1.1E-140 T 12-10-2018 JDM601_3858 f338426a27c6ad8ea7b4f481b666e35f 761 SMART SM00642 16 653 1.2E-7 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 JDM601_3858 f338426a27c6ad8ea7b4f481b666e35f 761 Gene3D G3DSA:1.10.10.470 498 594 1.1E-140 T 12-10-2018 JDM601_3858 f338426a27c6ad8ea7b4f481b666e35f 761 Gene3D G3DSA:1.10.150.200 318 454 1.1E-140 T 12-10-2018 JDM601_3858 f338426a27c6ad8ea7b4f481b666e35f 761 Pfam PF00128 Alpha amylase, catalytic domain 27 98 3.1E-15 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 JDM601_3858 f338426a27c6ad8ea7b4f481b666e35f 761 SUPERFAMILY SSF51445 7 673 7.36E-116 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily JDM601_1453 34a03ea0bb376c626d96cbdaa2b34263 361 Gene3D G3DSA:3.40.50.970 50 227 1.8E-24 T 12-10-2018 JDM601_1453 34a03ea0bb376c626d96cbdaa2b34263 361 SUPERFAMILY SSF52518 30 360 3.4E-78 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold JDM601_1453 34a03ea0bb376c626d96cbdaa2b34263 361 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 76 223 2.9E-29 T 12-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 JDM601_2296 1b192064d1618f856570e6808c9e36a5 327 Gene3D G3DSA:3.40.109.10 104 327 1.1E-50 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 JDM601_2296 1b192064d1618f856570e6808c9e36a5 327 SUPERFAMILY SSF55469 6 96 1.57E-7 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 JDM601_2296 1b192064d1618f856570e6808c9e36a5 327 Pfam PF00881 Nitroreductase family 219 302 7.6E-6 T 12-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 JDM601_2296 1b192064d1618f856570e6808c9e36a5 327 SUPERFAMILY SSF55469 6 323 3.99E-18 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 JDM601_2296 1b192064d1618f856570e6808c9e36a5 327 Gene3D G3DSA:3.40.109.10 2 102 5.3E-35 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 JDM601_2720 edeefcee441d94cc0ad6881c39e4d4e2 337 SUPERFAMILY SSF51735 4 184 7.53E-66 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_2720 edeefcee441d94cc0ad6881c39e4d4e2 337 Hamap MF_00435 Ketol-acid reductoisomerase (NADP(+)) [ilvC]. 3 330 44.605 T 12-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 JDM601_2720 edeefcee441d94cc0ad6881c39e4d4e2 337 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 16 179 3.3E-67 T 12-10-2018 IPR013116 Ketol-acid reductoisomerase, N-terminal KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 JDM601_2720 edeefcee441d94cc0ad6881c39e4d4e2 337 PIRSF PIRSF000116 3 207 5.0E-39 T 12-10-2018 IPR014359 Ketol-acid reductoisomerase, prokaryotic GO:0004455|GO:0009082|GO:0050661|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 JDM601_2720 edeefcee441d94cc0ad6881c39e4d4e2 337 PIRSF PIRSF000116 204 334 1.4E-17 T 12-10-2018 IPR014359 Ketol-acid reductoisomerase, prokaryotic GO:0004455|GO:0009082|GO:0050661|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 JDM601_2720 edeefcee441d94cc0ad6881c39e4d4e2 337 Gene3D G3DSA:3.40.50.720 1 183 2.7E-70 T 12-10-2018 JDM601_2720 edeefcee441d94cc0ad6881c39e4d4e2 337 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 16 328 2.0E-118 T 12-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 JDM601_2720 edeefcee441d94cc0ad6881c39e4d4e2 337 SUPERFAMILY SSF48179 185 330 3.74E-66 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 JDM601_2720 edeefcee441d94cc0ad6881c39e4d4e2 337 Gene3D G3DSA:1.10.3730.40 184 337 1.9E-72 T 12-10-2018 JDM601_2720 edeefcee441d94cc0ad6881c39e4d4e2 337 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 185 328 1.6E-61 T 12-10-2018 IPR000506 Ketol-acid reductoisomerase, C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 JDM601_1040 4474c1285b1d1f41990526d9198c1983 254 Gene3D G3DSA:1.10.620.20 1 254 1.2E-94 T 12-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 JDM601_1040 4474c1285b1d1f41990526d9198c1983 254 PIRSF PIRSF000346 1 251 8.4E-68 T 12-10-2018 IPR005067 Fatty acid desaturase, type 2 GO:0006631|GO:0045300|GO:0055114 JDM601_1040 4474c1285b1d1f41990526d9198c1983 254 SUPERFAMILY SSF47240 9 251 3.58E-58 T 12-10-2018 IPR009078 Ferritin-like superfamily JDM601_1040 4474c1285b1d1f41990526d9198c1983 254 Pfam PF03405 Fatty acid desaturase 9 249 7.3E-30 T 12-10-2018 IPR005067 Fatty acid desaturase, type 2 GO:0006631|GO:0045300|GO:0055114 JDM601_2372 8cc74ddac863841df6f532ae24ebd635 552 Gene3D G3DSA:3.90.76.10 73 176 4.4E-15 T 12-10-2018 JDM601_2372 8cc74ddac863841df6f532ae24ebd635 552 Gene3D G3DSA:3.10.105.10 316 519 2.3E-19 T 12-10-2018 JDM601_2372 8cc74ddac863841df6f532ae24ebd635 552 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 98 382 6.9E-13 T 12-10-2018 IPR000914 Solute-binding protein family 5 domain JDM601_2372 8cc74ddac863841df6f532ae24ebd635 552 Gene3D G3DSA:3.40.190.10 192 305 2.1E-6 T 12-10-2018 JDM601_2372 8cc74ddac863841df6f532ae24ebd635 552 SUPERFAMILY SSF53850 37 548 1.39E-43 T 12-10-2018 JDM601_2270 5ecc52255d55fe0d082ffa86ed499f4e 306 Pfam PF10128 Glucose-6-phosphate dehydrogenase subunit 55 297 3.6E-76 T 12-10-2018 IPR004555 Glucose-6-phosphate dehydrogenase assembly protein OpcA JDM601_2270 5ecc52255d55fe0d082ffa86ed499f4e 306 TIGRFAM TIGR00534 OpcA: glucose-6-phosphate dehydrogenase assembly protein OpcA 1 305 7.8E-104 T 12-10-2018 IPR004555 Glucose-6-phosphate dehydrogenase assembly protein OpcA JDM601_3246 818d17726f6cd55b26e28dfd2f1c5487 492 Pfam PF01256 Carbohydrate kinase 234 395 7.2E-47 T 12-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 JDM601_3246 818d17726f6cd55b26e28dfd2f1c5487 492 Pfam PF01256 Carbohydrate kinase 411 482 4.6E-16 T 12-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 JDM601_3246 818d17726f6cd55b26e28dfd2f1c5487 492 ProSitePatterns PS01049 YjeF C-terminal domain signature 1. 292 302 - T 12-10-2018 IPR017953 Carbohydrate kinase, predicted, conserved site JDM601_3246 818d17726f6cd55b26e28dfd2f1c5487 492 SUPERFAMILY SSF64153 3 231 2.35E-45 T 12-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 JDM601_3246 818d17726f6cd55b26e28dfd2f1c5487 492 SUPERFAMILY SSF53613 212 491 2.12E-56 T 12-10-2018 IPR029056 Ribokinase-like JDM601_3246 818d17726f6cd55b26e28dfd2f1c5487 492 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 210 490 20.374 T 12-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 JDM601_3246 818d17726f6cd55b26e28dfd2f1c5487 492 Gene3D G3DSA:3.40.50.10260 5 205 5.0E-43 T 12-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 JDM601_3246 818d17726f6cd55b26e28dfd2f1c5487 492 Hamap MF_01966 NAD(P)H-hydrate epimerase [nnrE]. 4 200 18.803 T 12-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 JDM601_3246 818d17726f6cd55b26e28dfd2f1c5487 492 PIRSF PIRSF017184 409 492 5.8E-13 T 12-10-2018 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 JDM601_3246 818d17726f6cd55b26e28dfd2f1c5487 492 PIRSF PIRSF017184 3 404 2.5E-76 T 12-10-2018 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 JDM601_3246 818d17726f6cd55b26e28dfd2f1c5487 492 Pfam PF03853 YjeF-related protein N-terminus 25 182 1.9E-34 T 12-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 JDM601_3246 818d17726f6cd55b26e28dfd2f1c5487 492 ProSitePatterns PS01050 YjeF C-terminal domain signature 2. 427 437 - T 12-10-2018 IPR017953 Carbohydrate kinase, predicted, conserved site JDM601_3246 818d17726f6cd55b26e28dfd2f1c5487 492 Gene3D G3DSA:3.40.1190.20 207 492 4.2E-75 T 12-10-2018 IPR029056 Ribokinase-like JDM601_3442 39788830b6da52e39ae2278caaae5a13 427 Pfam PF00067 Cytochrome P450 251 388 8.2E-22 T 12-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_3442 39788830b6da52e39ae2278caaae5a13 427 Gene3D G3DSA:1.10.630.10 2 427 3.4E-97 T 12-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_3442 39788830b6da52e39ae2278caaae5a13 427 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 361 370 - T 12-10-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 JDM601_3442 39788830b6da52e39ae2278caaae5a13 427 SUPERFAMILY SSF48264 18 427 4.32E-79 T 12-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_3442 39788830b6da52e39ae2278caaae5a13 427 PRINTS PR00359 B-class P450 signature 210 232 1.4E-38 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3442 39788830b6da52e39ae2278caaae5a13 427 PRINTS PR00359 B-class P450 signature 309 336 1.4E-38 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3442 39788830b6da52e39ae2278caaae5a13 427 PRINTS PR00359 B-class P450 signature 368 379 1.4E-38 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3442 39788830b6da52e39ae2278caaae5a13 427 PRINTS PR00359 B-class P450 signature 152 168 1.4E-38 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3442 39788830b6da52e39ae2278caaae5a13 427 PRINTS PR00359 B-class P450 signature 292 303 1.4E-38 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3442 39788830b6da52e39ae2278caaae5a13 427 PRINTS PR00359 B-class P450 signature 359 368 1.4E-38 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3442 39788830b6da52e39ae2278caaae5a13 427 PRINTS PR00359 B-class P450 signature 337 352 1.4E-38 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3442 39788830b6da52e39ae2278caaae5a13 427 PRINTS PR00359 B-class P450 signature 169 184 1.4E-38 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3442 39788830b6da52e39ae2278caaae5a13 427 PRINTS PR00359 B-class P450 signature 106 117 1.4E-38 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3442 39788830b6da52e39ae2278caaae5a13 427 PRINTS PR00385 P450 superfamily signature 359 368 2.9E-5 T 12-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_3442 39788830b6da52e39ae2278caaae5a13 427 PRINTS PR00385 P450 superfamily signature 292 303 2.9E-5 T 12-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_3442 39788830b6da52e39ae2278caaae5a13 427 PRINTS PR00385 P450 superfamily signature 368 379 2.9E-5 T 12-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_3442 39788830b6da52e39ae2278caaae5a13 427 PRINTS PR00385 P450 superfamily signature 257 274 2.9E-5 T 12-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_1057 26a1454c1a0003395f2bf306ec176449 54 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 1 31 7.0E-9 T 12-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 JDM601_1057 26a1454c1a0003395f2bf306ec176449 54 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 1 45 6.5E-16 T 12-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 JDM601_1057 26a1454c1a0003395f2bf306ec176449 54 SUPERFAMILY SSF116842 1 46 1.44E-11 T 12-10-2018 JDM601_1057 26a1454c1a0003395f2bf306ec176449 54 Gene3D G3DSA:1.10.287.1040 1 53 1.9E-11 T 12-10-2018 IPR037004 Exonuclease VII, small subunit superfamily GO:0006308|GO:0008855|GO:0009318 JDM601_1057 26a1454c1a0003395f2bf306ec176449 54 Pfam PF02609 Exonuclease VII small subunit 1 41 2.1E-13 T 12-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 JDM601_1057 26a1454c1a0003395f2bf306ec176449 54 PIRSF PIRSF006488 1 54 9.2E-19 T 12-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 JDM601_0338 a27e6cdf6f2b2af9632b6f87e34f5155 615 Gene3D G3DSA:3.90.640.10 200 288 2.4E-149 T 12-10-2018 JDM601_0338 a27e6cdf6f2b2af9632b6f87e34f5155 615 SUPERFAMILY SSF53067 3 159 1.15E-57 T 12-10-2018 JDM601_0338 a27e6cdf6f2b2af9632b6f87e34f5155 615 SUPERFAMILY SSF100920 358 514 8.37E-64 T 12-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 JDM601_0338 a27e6cdf6f2b2af9632b6f87e34f5155 615 Gene3D G3DSA:3.30.420.40 162 339 2.4E-149 T 12-10-2018 JDM601_0338 a27e6cdf6f2b2af9632b6f87e34f5155 615 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 310 324 - T 12-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 JDM601_0338 a27e6cdf6f2b2af9632b6f87e34f5155 615 Gene3D G3DSA:1.20.1270.10 481 586 6.2E-32 T 12-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 JDM601_0338 a27e6cdf6f2b2af9632b6f87e34f5155 615 Gene3D G3DSA:2.60.34.10 351 480 2.4E-61 T 12-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 JDM601_0338 a27e6cdf6f2b2af9632b6f87e34f5155 615 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 4 582 2.0E-274 T 12-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 JDM601_0338 a27e6cdf6f2b2af9632b6f87e34f5155 615 PRINTS PR00301 70kDa heat shock protein signature 307 323 2.2E-77 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 JDM601_0338 a27e6cdf6f2b2af9632b6f87e34f5155 615 PRINTS PR00301 70kDa heat shock protein signature 362 381 2.2E-77 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 JDM601_0338 a27e6cdf6f2b2af9632b6f87e34f5155 615 PRINTS PR00301 70kDa heat shock protein signature 114 134 2.2E-77 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 JDM601_0338 a27e6cdf6f2b2af9632b6f87e34f5155 615 PRINTS PR00301 70kDa heat shock protein signature 339 359 2.2E-77 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 JDM601_0338 a27e6cdf6f2b2af9632b6f87e34f5155 615 PRINTS PR00301 70kDa heat shock protein signature 443 459 2.2E-77 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 JDM601_0338 a27e6cdf6f2b2af9632b6f87e34f5155 615 PRINTS PR00301 70kDa heat shock protein signature 31 43 2.2E-77 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 JDM601_0338 a27e6cdf6f2b2af9632b6f87e34f5155 615 PRINTS PR00301 70kDa heat shock protein signature 54 62 2.2E-77 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 JDM601_0338 a27e6cdf6f2b2af9632b6f87e34f5155 615 PRINTS PR00301 70kDa heat shock protein signature 174 184 2.2E-77 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 JDM601_0338 a27e6cdf6f2b2af9632b6f87e34f5155 615 PRINTS PR00301 70kDa heat shock protein signature 3 16 2.2E-77 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 JDM601_0338 a27e6cdf6f2b2af9632b6f87e34f5155 615 Pfam PF00012 Hsp70 protein 78 582 8.1E-218 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 JDM601_0338 a27e6cdf6f2b2af9632b6f87e34f5155 615 SUPERFAMILY SSF53067 162 356 4.02E-63 T 12-10-2018 JDM601_0338 a27e6cdf6f2b2af9632b6f87e34f5155 615 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 12-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 JDM601_0338 a27e6cdf6f2b2af9632b6f87e34f5155 615 SUPERFAMILY SSF100934 481 583 5.1E-14 T 12-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 JDM601_0338 a27e6cdf6f2b2af9632b6f87e34f5155 615 Gene3D G3DSA:3.30.420.40 5 350 2.4E-149 T 12-10-2018 JDM601_0338 a27e6cdf6f2b2af9632b6f87e34f5155 615 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 168 181 - T 12-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 JDM601_0338 a27e6cdf6f2b2af9632b6f87e34f5155 615 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 611 36.269 T 12-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 JDM601_0435 9eb99404296b212221dc43c6a05b927a 338 Gene3D G3DSA:3.20.20.100 1 330 2.4E-111 T 12-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily JDM601_0435 9eb99404296b212221dc43c6a05b927a 338 SUPERFAMILY SSF51430 1 317 3.93E-96 T 12-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily JDM601_0435 9eb99404296b212221dc43c6a05b927a 338 Pfam PF00248 Aldo/keto reductase family 15 315 3.3E-72 T 12-10-2018 IPR023210 NADP-dependent oxidoreductase domain JDM601_3338 8da68b06db69a8e3442c5ac9ae7bb6d6 205 ProSitePatterns PS00474 Ribosomal protein L3 signature. 94 117 - T 12-10-2018 IPR019926 Ribosomal protein L3, conserved site JDM601_3338 8da68b06db69a8e3442c5ac9ae7bb6d6 205 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 1 197 2.0E-83 T 12-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JDM601_3338 8da68b06db69a8e3442c5ac9ae7bb6d6 205 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 1 200 35.086 T 12-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JDM601_3338 8da68b06db69a8e3442c5ac9ae7bb6d6 205 Gene3D G3DSA:2.40.50.620 22 88 1.6E-16 T 12-10-2018 JDM601_3338 8da68b06db69a8e3442c5ac9ae7bb6d6 205 Gene3D G3DSA:2.40.30.10 114 203 7.7E-18 T 12-10-2018 JDM601_3338 8da68b06db69a8e3442c5ac9ae7bb6d6 205 Pfam PF00297 Ribosomal protein L3 87 175 2.1E-16 T 12-10-2018 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JDM601_3338 8da68b06db69a8e3442c5ac9ae7bb6d6 205 SUPERFAMILY SSF50447 1 204 8.83E-77 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily JDM601_3760 109a04f414551e08a1103ad7b34f8cb4 280 SUPERFAMILY SSF51556 9 278 1.78E-62 T 12-10-2018 IPR032466 Metal-dependent hydrolase JDM601_3760 109a04f414551e08a1103ad7b34f8cb4 280 Gene3D G3DSA:3.20.20.140 7 278 3.2E-65 T 12-10-2018 JDM601_3760 109a04f414551e08a1103ad7b34f8cb4 280 Pfam PF04909 Amidohydrolase 73 277 1.8E-43 T 12-10-2018 IPR006680 Amidohydrolase-related GO:0016787 JDM601_1552 53cfabf2675433cca16d44779b21fbd9 215 Pfam PF13649 Methyltransferase domain 47 143 4.0E-17 T 12-10-2018 JDM601_1552 53cfabf2675433cca16d44779b21fbd9 215 Gene3D G3DSA:3.40.50.150 16 211 7.8E-32 T 12-10-2018 JDM601_1552 53cfabf2675433cca16d44779b21fbd9 215 SUPERFAMILY SSF53335 23 195 2.89E-30 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JDM601_0340 8bceb86122131396567ef50709271b85 399 SUPERFAMILY SSF46565 8 103 8.77E-23 T 12-10-2018 IPR036869 Chaperone J-domain superfamily JDM601_0340 8bceb86122131396567ef50709271b85 399 SUPERFAMILY SSF57938 167 242 3.53E-18 T 12-10-2018 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily JDM601_0340 8bceb86122131396567ef50709271b85 399 Gene3D G3DSA:2.10.230.10 178 244 2.7E-19 T 12-10-2018 JDM601_0340 8bceb86122131396567ef50709271b85 399 SMART SM00271 9 67 1.2E-18 T 12-10-2018 IPR001623 DnaJ domain JDM601_0340 8bceb86122131396567ef50709271b85 399 SUPERFAMILY SSF49493 146 299 1.83E-19 T 12-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 JDM601_0340 8bceb86122131396567ef50709271b85 399 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 7 392 36.693 T 12-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 JDM601_0340 8bceb86122131396567ef50709271b85 399 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 10 382 8.7E-117 T 12-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 JDM601_0340 8bceb86122131396567ef50709271b85 399 Pfam PF01556 DnaJ C terminal domain 154 365 3.3E-37 T 12-10-2018 IPR002939 Chaperone DnaJ, C-terminal JDM601_0340 8bceb86122131396567ef50709271b85 399 PRINTS PR00625 DnaJ domain signature 12 30 1.9E-15 T 12-10-2018 IPR001623 DnaJ domain JDM601_0340 8bceb86122131396567ef50709271b85 399 PRINTS PR00625 DnaJ domain signature 47 67 1.9E-15 T 12-10-2018 IPR001623 DnaJ domain JDM601_0340 8bceb86122131396567ef50709271b85 399 PRINTS PR00625 DnaJ domain signature 30 45 1.9E-15 T 12-10-2018 IPR001623 DnaJ domain JDM601_0340 8bceb86122131396567ef50709271b85 399 PRINTS PR00625 DnaJ domain signature 67 86 1.9E-15 T 12-10-2018 IPR001623 DnaJ domain JDM601_0340 8bceb86122131396567ef50709271b85 399 Pfam PF00684 DnaJ central domain 180 240 3.7E-12 T 12-10-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 JDM601_0340 8bceb86122131396567ef50709271b85 399 Gene3D G3DSA:1.10.287.110 1 79 1.5E-22 T 12-10-2018 IPR036869 Chaperone J-domain superfamily JDM601_0340 8bceb86122131396567ef50709271b85 399 SUPERFAMILY SSF49493 292 375 1.07E-21 T 12-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 JDM601_0340 8bceb86122131396567ef50709271b85 399 Gene3D G3DSA:2.60.260.20 290 389 3.9E-27 T 12-10-2018 JDM601_0340 8bceb86122131396567ef50709271b85 399 Pfam PF00226 DnaJ domain 10 72 2.1E-19 T 12-10-2018 IPR001623 DnaJ domain JDM601_0115 00ec6900418e3de5e3c9cf117e4e2aef 371 Pfam PF00107 Zinc-binding dehydrogenase 207 322 1.9E-14 T 12-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 JDM601_0115 00ec6900418e3de5e3c9cf117e4e2aef 371 Gene3D G3DSA:3.40.50.720 184 313 3.0E-100 T 12-10-2018 JDM601_0115 00ec6900418e3de5e3c9cf117e4e2aef 371 SUPERFAMILY SSF51735 169 335 2.15E-31 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_0115 00ec6900418e3de5e3c9cf117e4e2aef 371 Gene3D G3DSA:3.90.180.10 21 365 3.0E-100 T 12-10-2018 JDM601_0115 00ec6900418e3de5e3c9cf117e4e2aef 371 SUPERFAMILY SSF50129 321 370 2.02E-6 T 12-10-2018 IPR011032 GroES-like superfamily JDM601_0115 00ec6900418e3de5e3c9cf117e4e2aef 371 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 36 163 7.1E-22 T 12-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 JDM601_0115 00ec6900418e3de5e3c9cf117e4e2aef 371 SMART SM00829 19 368 3.4E-4 T 12-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 JDM601_0115 00ec6900418e3de5e3c9cf117e4e2aef 371 SUPERFAMILY SSF50129 14 202 1.34E-50 T 12-10-2018 IPR011032 GroES-like superfamily JDM601_0310 e7b61ffa11dcd19d48badf65462e2404 392 Pfam PF00823 PPE family 8 164 1.4E-61 T 12-10-2018 IPR000030 PPE family JDM601_0310 e7b61ffa11dcd19d48badf65462e2404 392 Pfam PF12484 Polymorphic PE/PPE proteins C terminal 304 388 1.3E-8 T 12-10-2018 IPR022171 PPE family, C-terminal JDM601_0310 e7b61ffa11dcd19d48badf65462e2404 392 SUPERFAMILY SSF140459 5 177 2.12E-62 T 12-10-2018 JDM601_0310 e7b61ffa11dcd19d48badf65462e2404 392 Gene3D G3DSA:1.20.1260.20 4 177 5.2E-68 T 12-10-2018 IPR038332 PPE superfamily JDM601_1407 9386dfe6823be7a1d707f6cbba3c277b 268 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 11 211 9.8E-25 T 12-10-2018 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 JDM601_1407 9386dfe6823be7a1d707f6cbba3c277b 268 Gene3D G3DSA:3.20.20.60 1 222 6.9E-76 T 12-10-2018 JDM601_1407 9386dfe6823be7a1d707f6cbba3c277b 268 PIRSF PIRSF015582 1 268 4.3E-70 T 12-10-2018 IPR011206 Citrate lyase beta subunit-like JDM601_1407 9386dfe6823be7a1d707f6cbba3c277b 268 SUPERFAMILY SSF51621 7 223 3.04E-57 T 12-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 JDM601_1856 578bc4110249e37e90466b94e8343803 207 Pfam PF00293 NUDIX domain 45 157 7.3E-12 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 JDM601_1856 578bc4110249e37e90466b94e8343803 207 Gene3D G3DSA:3.90.79.10 1 207 1.1E-62 T 12-10-2018 JDM601_1856 578bc4110249e37e90466b94e8343803 207 SUPERFAMILY SSF55811 7 180 8.53E-45 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 JDM601_1263 75f90c2344599e300948fa06cc71c05a 99 SUPERFAMILY SSF47413 31 96 2.65E-15 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 JDM601_1263 75f90c2344599e300948fa06cc71c05a 99 Pfam PF01381 Helix-turn-helix 42 89 7.7E-14 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 JDM601_1263 75f90c2344599e300948fa06cc71c05a 99 Gene3D G3DSA:1.10.260.40 33 95 2.4E-15 T 12-10-2018 JDM601_1263 75f90c2344599e300948fa06cc71c05a 99 SMART SM00530 40 95 4.3E-13 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 JDM601_0419 10d159948891af1037afee6fcbfd04f2 191 TIGRFAM TIGR01806 CM_mono2: putative chorismate mutase 31 144 3.2E-32 T 12-10-2018 IPR008240 Chorismate mutase, periplasmic KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 JDM601_0419 10d159948891af1037afee6fcbfd04f2 191 Gene3D G3DSA:1.20.140.170 30 191 1.6E-47 T 12-10-2018 JDM601_0419 10d159948891af1037afee6fcbfd04f2 191 PIRSF PIRSF026640 5 191 8.7E-53 T 12-10-2018 IPR008240 Chorismate mutase, periplasmic KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 JDM601_0419 10d159948891af1037afee6fcbfd04f2 191 Pfam PF01817 Chorismate mutase type II 37 105 1.5E-9 T 12-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 JDM601_0419 10d159948891af1037afee6fcbfd04f2 191 SMART SM00830 28 108 3.4E-15 T 12-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 JDM601_0419 10d159948891af1037afee6fcbfd04f2 191 SUPERFAMILY SSF48600 35 190 4.5E-37 T 12-10-2018 IPR036263 Chorismate mutase type II superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 JDM601_2543 2d5e34a9dd64918a601c992a443e811d 289 Pfam PF00106 short chain dehydrogenase 8 201 6.5E-40 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2543 2d5e34a9dd64918a601c992a443e811d 289 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 150 158 1.1E-8 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2543 2d5e34a9dd64918a601c992a443e811d 289 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 171 190 1.1E-8 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2543 2d5e34a9dd64918a601c992a443e811d 289 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 91 102 1.1E-8 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2543 2d5e34a9dd64918a601c992a443e811d 289 SUPERFAMILY SSF51735 3 261 1.84E-57 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_2543 2d5e34a9dd64918a601c992a443e811d 289 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 205 2.9E-4 T 12-10-2018 JDM601_2543 2d5e34a9dd64918a601c992a443e811d 289 Gene3D G3DSA:3.40.50.720 3 289 7.7E-71 T 12-10-2018 JDM601_2543 2d5e34a9dd64918a601c992a443e811d 289 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 91 102 2.9E-23 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2543 2d5e34a9dd64918a601c992a443e811d 289 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 190 2.9E-23 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2543 2d5e34a9dd64918a601c992a443e811d 289 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 224 244 2.9E-23 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2543 2d5e34a9dd64918a601c992a443e811d 289 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 144 160 2.9E-23 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2543 2d5e34a9dd64918a601c992a443e811d 289 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 2.9E-23 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2543 2d5e34a9dd64918a601c992a443e811d 289 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 192 209 2.9E-23 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_4020 a9db90f2ffd19e366a7522ed35cee9e5 124 Pfam PF03965 Penicillinase repressor 7 116 3.3E-23 T 12-10-2018 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 JDM601_4020 a9db90f2ffd19e366a7522ed35cee9e5 124 Gene3D G3DSA:1.10.10.10 1 71 3.6E-27 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JDM601_4020 a9db90f2ffd19e366a7522ed35cee9e5 124 SUPERFAMILY SSF46785 4 119 3.43E-24 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JDM601_2732 3d921ed9c5f34eafb8b7f054e7ebeb9f 343 Gene3D G3DSA:3.40.50.450 3 324 1.3E-110 T 12-10-2018 JDM601_2732 3d921ed9c5f34eafb8b7f054e7ebeb9f 343 ProSitePatterns PS00433 Phosphofructokinase signature. 267 285 - T 12-10-2018 IPR015912 Phosphofructokinase, conserved site GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 JDM601_2732 3d921ed9c5f34eafb8b7f054e7ebeb9f 343 SUPERFAMILY SSF53784 1 333 6.54E-120 T 12-10-2018 IPR035966 Phosphofructokinase superfamily GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 JDM601_2732 3d921ed9c5f34eafb8b7f054e7ebeb9f 343 Gene3D G3DSA:3.40.50.460 141 279 1.3E-110 T 12-10-2018 JDM601_2732 3d921ed9c5f34eafb8b7f054e7ebeb9f 343 TIGRFAM TIGR02483 PFK_mixed: phosphofructokinase 2 324 5.9E-141 T 12-10-2018 IPR012829 Phosphofructokinase, mixed-substrate PFK group III GO:0006096|GO:0047334 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 JDM601_2732 3d921ed9c5f34eafb8b7f054e7ebeb9f 343 PIRSF PIRSF000532 1 341 8.7E-113 T 12-10-2018 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type GO:0005524|GO:0006002|GO:0006096|GO:0008443 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 JDM601_2732 3d921ed9c5f34eafb8b7f054e7ebeb9f 343 Hamap MF_01976 Pyrophosphate--fructose 6-phosphate 1-phosphotransferase [pfp]. 1 343 43.549 T 12-10-2018 IPR012829 Phosphofructokinase, mixed-substrate PFK group III GO:0006096|GO:0047334 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 JDM601_2732 3d921ed9c5f34eafb8b7f054e7ebeb9f 343 Pfam PF00365 Phosphofructokinase 2 298 1.0E-103 T 12-10-2018 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 JDM601_2732 3d921ed9c5f34eafb8b7f054e7ebeb9f 343 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 5 24 5.1E-76 T 12-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 JDM601_2732 3d921ed9c5f34eafb8b7f054e7ebeb9f 343 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 177 194 5.1E-76 T 12-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 JDM601_2732 3d921ed9c5f34eafb8b7f054e7ebeb9f 343 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 94 110 5.1E-76 T 12-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 JDM601_2732 3d921ed9c5f34eafb8b7f054e7ebeb9f 343 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 139 157 5.1E-76 T 12-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 JDM601_2732 3d921ed9c5f34eafb8b7f054e7ebeb9f 343 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 213 225 5.1E-76 T 12-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 JDM601_2732 3d921ed9c5f34eafb8b7f054e7ebeb9f 343 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 31 44 5.1E-76 T 12-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 JDM601_2732 3d921ed9c5f34eafb8b7f054e7ebeb9f 343 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 159 175 5.1E-76 T 12-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 JDM601_2732 3d921ed9c5f34eafb8b7f054e7ebeb9f 343 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 263 285 5.1E-76 T 12-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 JDM601_2732 3d921ed9c5f34eafb8b7f054e7ebeb9f 343 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 121 138 5.1E-76 T 12-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 JDM601_4305 2a679c4368de00339d672d48de61ae0b 152 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 12-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JDM601_4305 2a679c4368de00339d672d48de61ae0b 152 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 46 3.2E-20 T 12-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JDM601_4305 2a679c4368de00339d672d48de61ae0b 152 Gene3D G3DSA:3.40.5.10 1 59 1.1E-21 T 12-10-2018 IPR036935 Ribosomal protein L9, N-terminal domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JDM601_4305 2a679c4368de00339d672d48de61ae0b 152 SUPERFAMILY SSF55658 1 57 4.01E-17 T 12-10-2018 IPR009027 Ribosomal protein L9/RNase H1, N-terminal JDM601_4305 2a679c4368de00339d672d48de61ae0b 152 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 151 24.565 T 12-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 JDM601_4305 2a679c4368de00339d672d48de61ae0b 152 Pfam PF03948 Ribosomal protein L9, C-terminal domain 64 149 4.6E-23 T 12-10-2018 IPR020069 Ribosomal protein L9, C-terminal JDM601_4305 2a679c4368de00339d672d48de61ae0b 152 Gene3D G3DSA:3.10.430.100 62 151 5.7E-23 T 12-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily JDM601_4305 2a679c4368de00339d672d48de61ae0b 152 SUPERFAMILY SSF55653 61 150 1.29E-21 T 12-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily JDM601_4305 2a679c4368de00339d672d48de61ae0b 152 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 150 7.0E-36 T 12-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 JDM601_1062 759c23233b995b7cd77b0e5ac600e7f9 350 Pfam PF01926 50S ribosome-binding GTPase 1 114 3.7E-21 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 JDM601_1062 759c23233b995b7cd77b0e5ac600e7f9 350 SUPERFAMILY SSF52540 1 288 6.75E-70 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_1062 759c23233b995b7cd77b0e5ac600e7f9 350 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 350 1.5E-126 T 12-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 JDM601_1062 759c23233b995b7cd77b0e5ac600e7f9 350 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 80 98 5.3E-21 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 JDM601_1062 759c23233b995b7cd77b0e5ac600e7f9 350 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 63 78 5.3E-21 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 JDM601_1062 759c23233b995b7cd77b0e5ac600e7f9 350 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 19 37 5.3E-21 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 JDM601_1062 759c23233b995b7cd77b0e5ac600e7f9 350 Gene3D G3DSA:3.10.20.30 41 348 1.4E-134 T 12-10-2018 IPR012675 Beta-grasp domain superfamily JDM601_1062 759c23233b995b7cd77b0e5ac600e7f9 350 Gene3D G3DSA:1.10.150.300 106 189 1.4E-134 T 12-10-2018 IPR023192 TGS-like domain superfamily Reactome: R-HSA-114608 JDM601_1062 759c23233b995b7cd77b0e5ac600e7f9 350 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 1 350 40.506 T 12-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 JDM601_1062 759c23233b995b7cd77b0e5ac600e7f9 350 Gene3D G3DSA:3.40.50.300 1 265 1.4E-134 T 12-10-2018 JDM601_1062 759c23233b995b7cd77b0e5ac600e7f9 350 Pfam PF06071 Protein of unknown function (DUF933) 266 349 9.5E-40 T 12-10-2018 IPR013029 YchF, C-terminal domain Reactome: R-HSA-114608 JDM601_1062 759c23233b995b7cd77b0e5ac600e7f9 350 SUPERFAMILY SSF81271 266 350 1.77E-35 T 12-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 JDM601_1062 759c23233b995b7cd77b0e5ac600e7f9 350 PIRSF PIRSF006641 1 350 4.1E-134 T 12-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 JDM601_1685 8e84a0073f5e14e74d3ab090a300b91b 282 SMART SM00729 37 243 1.3E-15 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 JDM601_1685 8e84a0073f5e14e74d3ab090a300b91b 282 PIRSF PIRSF005963 1 280 4.7E-115 T 12-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 JDM601_1685 8e84a0073f5e14e74d3ab090a300b91b 282 Gene3D G3DSA:3.20.20.70 39 226 4.3E-17 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JDM601_1685 8e84a0073f5e14e74d3ab090a300b91b 282 SUPERFAMILY SSF102114 2 274 4.45E-62 T 12-10-2018 JDM601_1685 8e84a0073f5e14e74d3ab090a300b91b 282 Pfam PF04055 Radical SAM superfamily 45 201 4.7E-11 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 JDM601_1685 8e84a0073f5e14e74d3ab090a300b91b 282 Hamap MF_00206 Lipoyl synthase [lipA]. 1 273 131.455 T 12-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 JDM601_0267 9317beecc5551e4f2b6434f1c5e591d1 437 Gene3D G3DSA:3.90.1150.110 10 424 4.2E-118 T 12-10-2018 JDM601_0267 9317beecc5551e4f2b6434f1c5e591d1 437 Gene3D G3DSA:3.40.640.10 86 345 4.2E-118 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 JDM601_0267 9317beecc5551e4f2b6434f1c5e591d1 437 Hamap MF_00423 L-seryl-tRNA(Sec) selenium transferase [selA]. 1 437 170.162 T 12-10-2018 IPR004534 L-seryl-tRNA(Sec) selenium transferase GO:0001514|GO:0004125|GO:0005737 KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 JDM601_0267 9317beecc5551e4f2b6434f1c5e591d1 437 Pfam PF12390 Selenocysteine synthase N terminal 7 46 1.9E-6 T 12-10-2018 IPR025862 L-seryl-tRNA selenium transferase N-terminal domain KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 JDM601_0267 9317beecc5551e4f2b6434f1c5e591d1 437 SUPERFAMILY SSF53383 71 357 2.59E-36 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase JDM601_0267 9317beecc5551e4f2b6434f1c5e591d1 437 TIGRFAM TIGR00474 selA: L-seryl-tRNA(Sec) selenium transferase 8 433 3.1E-125 T 12-10-2018 IPR004534 L-seryl-tRNA(Sec) selenium transferase GO:0001514|GO:0004125|GO:0005737 KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 JDM601_0267 9317beecc5551e4f2b6434f1c5e591d1 437 Pfam PF03841 L-seryl-tRNA selenium transferase 74 420 4.5E-101 T 12-10-2018 IPR018319 L-seryl-tRNA selenium transferase-like KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 JDM601_2184 ddfb3d189a35b0f9759f7490f14ed4ea 301 Gene3D G3DSA:3.30.2350.10 76 301 3.0E-66 T 12-10-2018 JDM601_2184 ddfb3d189a35b0f9759f7490f14ed4ea 301 SUPERFAMILY SSF55174 8 95 3.53E-5 T 12-10-2018 JDM601_2184 ddfb3d189a35b0f9759f7490f14ed4ea 301 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 7 300 3.8E-85 T 12-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 JDM601_2184 ddfb3d189a35b0f9759f7490f14ed4ea 301 Pfam PF00849 RNA pseudouridylate synthase 84 238 1.4E-32 T 12-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 JDM601_2184 ddfb3d189a35b0f9759f7490f14ed4ea 301 SUPERFAMILY SSF55120 68 300 6.08E-66 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 JDM601_2184 ddfb3d189a35b0f9759f7490f14ed4ea 301 Gene3D G3DSA:3.10.290.10 1 62 3.5E-7 T 12-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 JDM601_2184 ddfb3d189a35b0f9759f7490f14ed4ea 301 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 130 144 - T 12-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 JDM601_1899 4a588aa2ceff0c4c7f78ed9bb25b2caa 596 Pfam PF00082 Subtilase family 281 525 1.2E-18 T 12-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 JDM601_1899 4a588aa2ceff0c4c7f78ed9bb25b2caa 596 Gene3D G3DSA:3.40.50.200 238 540 2.0E-58 T 12-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 JDM601_1899 4a588aa2ceff0c4c7f78ed9bb25b2caa 596 Gene3D G3DSA:3.40.50.200 29 151 2.4E-23 T 12-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 JDM601_1899 4a588aa2ceff0c4c7f78ed9bb25b2caa 596 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 96 106 - T 12-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site JDM601_1899 4a588aa2ceff0c4c7f78ed9bb25b2caa 596 PRINTS PR01217 Proline rich extensin signature 152 173 2.6E-10 T 12-10-2018 JDM601_1899 4a588aa2ceff0c4c7f78ed9bb25b2caa 596 PRINTS PR01217 Proline rich extensin signature 190 207 2.6E-10 T 12-10-2018 JDM601_1899 4a588aa2ceff0c4c7f78ed9bb25b2caa 596 PRINTS PR01217 Proline rich extensin signature 209 234 2.6E-10 T 12-10-2018 JDM601_1899 4a588aa2ceff0c4c7f78ed9bb25b2caa 596 PRINTS PR01217 Proline rich extensin signature 173 189 2.6E-10 T 12-10-2018 JDM601_1899 4a588aa2ceff0c4c7f78ed9bb25b2caa 596 PRINTS PR01217 Proline rich extensin signature 41 53 2.6E-10 T 12-10-2018 JDM601_1899 4a588aa2ceff0c4c7f78ed9bb25b2caa 596 SUPERFAMILY SSF52743 71 535 3.11E-39 T 12-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 JDM601_2473 a30b408272bfa7b8875096fc4a2c78a4 152 SUPERFAMILY SSF55961 1 145 1.06E-26 T 12-10-2018 JDM601_2473 a30b408272bfa7b8875096fc4a2c78a4 152 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 11 124 1.7E-17 T 12-10-2018 IPR005031 Coenzyme Q-binding protein COQ10, START domain Reactome: R-HSA-611105 JDM601_2473 a30b408272bfa7b8875096fc4a2c78a4 152 Gene3D G3DSA:3.30.530.20 2 142 6.9E-36 T 12-10-2018 IPR023393 START-like domain superfamily JDM601_2128 e39207356b8ad229dde60ce245503313 472 PRINTS PR01050 Pyruvate kinase family signature 185 199 2.8E-63 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 JDM601_2128 e39207356b8ad229dde60ce245503313 472 PRINTS PR01050 Pyruvate kinase family signature 215 241 2.8E-63 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 JDM601_2128 e39207356b8ad229dde60ce245503313 472 PRINTS PR01050 Pyruvate kinase family signature 267 291 2.8E-63 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 JDM601_2128 e39207356b8ad229dde60ce245503313 472 PRINTS PR01050 Pyruvate kinase family signature 292 310 2.8E-63 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 JDM601_2128 e39207356b8ad229dde60ce245503313 472 PRINTS PR01050 Pyruvate kinase family signature 311 327 2.8E-63 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 JDM601_2128 e39207356b8ad229dde60ce245503313 472 PRINTS PR01050 Pyruvate kinase family signature 60 76 2.8E-63 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 JDM601_2128 e39207356b8ad229dde60ce245503313 472 PRINTS PR01050 Pyruvate kinase family signature 242 266 2.8E-63 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 JDM601_2128 e39207356b8ad229dde60ce245503313 472 Gene3D G3DSA:3.20.20.60 3 333 7.8E-167 T 12-10-2018 JDM601_2128 e39207356b8ad229dde60ce245503313 472 Pfam PF02887 Pyruvate kinase, alpha/beta domain 354 465 4.6E-23 T 12-10-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 JDM601_2128 e39207356b8ad229dde60ce245503313 472 ProSitePatterns PS00110 Pyruvate kinase active site signature. 213 225 - T 12-10-2018 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 JDM601_2128 e39207356b8ad229dde60ce245503313 472 SUPERFAMILY SSF50800 71 165 8.2E-25 T 12-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily JDM601_2128 e39207356b8ad229dde60ce245503313 472 SUPERFAMILY SSF51621 2 336 1.57E-95 T 12-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 JDM601_2128 e39207356b8ad229dde60ce245503313 472 Gene3D G3DSA:3.40.1380.20 334 462 7.8E-167 T 12-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 JDM601_2128 e39207356b8ad229dde60ce245503313 472 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 3 467 9.8E-168 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 JDM601_2128 e39207356b8ad229dde60ce245503313 472 Gene3D G3DSA:2.40.33.10 71 167 7.8E-167 T 12-10-2018 IPR015806 Pyruvate kinase, insert domain superfamily GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 JDM601_2128 e39207356b8ad229dde60ce245503313 472 Pfam PF00224 Pyruvate kinase, barrel domain 3 335 2.0E-119 T 12-10-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 JDM601_2128 e39207356b8ad229dde60ce245503313 472 SUPERFAMILY SSF52935 321 468 1.44E-34 T 12-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 JDM601_0433 9a3bb39fa8bc631780da2608e6a2e8e8 445 Gene3D G3DSA:3.60.15.10 1 267 8.4E-42 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like JDM601_0433 9a3bb39fa8bc631780da2608e6a2e8e8 445 SUPERFAMILY SSF56281 1 240 1.31E-28 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like JDM601_0433 9a3bb39fa8bc631780da2608e6a2e8e8 445 Pfam PF12706 Beta-lactamase superfamily domain 45 195 5.4E-16 T 12-10-2018 IPR001279 Metallo-beta-lactamase JDM601_0433 9a3bb39fa8bc631780da2608e6a2e8e8 445 SUPERFAMILY SSF52540 274 442 1.91E-38 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_0433 9a3bb39fa8bc631780da2608e6a2e8e8 445 SMART SM00849 35 237 2.8E-6 T 12-10-2018 IPR001279 Metallo-beta-lactamase JDM601_0433 9a3bb39fa8bc631780da2608e6a2e8e8 445 Pfam PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase 274 442 1.6E-52 T 12-10-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-6269|MetaCyc: PWY-7962|MetaCyc: PWY-7971|MetaCyc: PWY-7972 JDM601_0433 9a3bb39fa8bc631780da2608e6a2e8e8 445 Gene3D G3DSA:3.40.50.300 274 442 1.9E-50 T 12-10-2018 JDM601_1926 c45ad4f5783306f7e5ff32dc71f32151 943 Gene3D G3DSA:3.40.640.10 99 357 3.7E-106 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 JDM601_1926 c45ad4f5783306f7e5ff32dc71f32151 943 Gene3D G3DSA:3.40.640.10 508 730 1.3E-56 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 JDM601_1926 c45ad4f5783306f7e5ff32dc71f32151 943 TIGRFAM TIGR00461 gcvP: glycine dehydrogenase 12 936 0.0 T 12-10-2018 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 JDM601_1926 c45ad4f5783306f7e5ff32dc71f32151 943 Pfam PF02347 Glycine cleavage system P-protein 465 722 1.7E-10 T 12-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 JDM601_1926 c45ad4f5783306f7e5ff32dc71f32151 943 Pfam PF02347 Glycine cleavage system P-protein 11 440 3.1E-178 T 12-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 JDM601_1926 c45ad4f5783306f7e5ff32dc71f32151 943 SUPERFAMILY SSF53383 469 938 2.77E-93 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase JDM601_1926 c45ad4f5783306f7e5ff32dc71f32151 943 Hamap MF_00711 Glycine dehydrogenase (decarboxylating) [gcvP]. 3 942 24.642 T 12-10-2018 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 JDM601_1926 c45ad4f5783306f7e5ff32dc71f32151 943 SUPERFAMILY SSF53383 12 440 1.75E-96 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase JDM601_1926 c45ad4f5783306f7e5ff32dc71f32151 943 Gene3D G3DSA:3.90.1150.10 751 888 2.2E-36 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 JDM601_3735 6022cdddb990240e4db00f244948197a 63 Gene3D G3DSA:3.30.70.20 1 63 1.1E-16 T 12-10-2018 JDM601_3735 6022cdddb990240e4db00f244948197a 63 Pfam PF13459 4Fe-4S single cluster domain 3 61 1.6E-10 T 12-10-2018 JDM601_3735 6022cdddb990240e4db00f244948197a 63 SUPERFAMILY SSF54862 2 61 1.23E-10 T 12-10-2018 JDM601_3999 5de7b9462ac55ff4443cb1867a12f3a2 57 Pfam PF00301 Rubredoxin 4 50 5.7E-19 T 12-10-2018 IPR024935 Rubredoxin domain GO:0005506 JDM601_3999 5de7b9462ac55ff4443cb1867a12f3a2 57 ProSitePatterns PS00202 Rubredoxin signature. 33 43 - T 12-10-2018 IPR018527 Rubredoxin, iron-binding site GO:0046872 JDM601_3999 5de7b9462ac55ff4443cb1867a12f3a2 57 PRINTS PR00163 Rubredoxin signature 3 19 7.2E-6 T 12-10-2018 IPR024935 Rubredoxin domain GO:0005506 JDM601_3999 5de7b9462ac55ff4443cb1867a12f3a2 57 PRINTS PR00163 Rubredoxin signature 33 49 7.2E-6 T 12-10-2018 IPR024935 Rubredoxin domain GO:0005506 JDM601_3999 5de7b9462ac55ff4443cb1867a12f3a2 57 SUPERFAMILY SSF57802 2 54 2.86E-17 T 12-10-2018 JDM601_3999 5de7b9462ac55ff4443cb1867a12f3a2 57 Gene3D G3DSA:2.20.28.10 1 56 4.1E-24 T 12-10-2018 JDM601_4340 3c7bd778e8c4f95dc7c7570968eed9d5 406 SMART SM00646 255 370 7.6E-26 T 12-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 JDM601_4340 3c7bd778e8c4f95dc7c7570968eed9d5 406 Pfam PF01471 Putative peptidoglycan binding domain 20 83 2.9E-11 T 12-10-2018 IPR002477 Peptidoglycan binding-like JDM601_4340 3c7bd778e8c4f95dc7c7570968eed9d5 406 Pfam PF01471 Putative peptidoglycan binding domain 105 160 1.7E-15 T 12-10-2018 IPR002477 Peptidoglycan binding-like JDM601_4340 3c7bd778e8c4f95dc7c7570968eed9d5 406 SUPERFAMILY SSF47090 101 163 1.52E-18 T 12-10-2018 IPR036365 PGBD-like superfamily JDM601_4340 3c7bd778e8c4f95dc7c7570968eed9d5 406 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 193 370 7.3E-27 T 12-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 JDM601_4340 3c7bd778e8c4f95dc7c7570968eed9d5 406 Gene3D G3DSA:1.10.101.10 4 88 3.1E-12 T 12-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 JDM601_4340 3c7bd778e8c4f95dc7c7570968eed9d5 406 Gene3D G3DSA:1.10.101.10 98 163 2.4E-19 T 12-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 JDM601_4340 3c7bd778e8c4f95dc7c7570968eed9d5 406 SUPERFAMILY SSF53187 190 373 1.57E-35 T 12-10-2018 JDM601_4340 3c7bd778e8c4f95dc7c7570968eed9d5 406 Gene3D G3DSA:3.40.630.40 189 375 2.0E-29 T 12-10-2018 JDM601_4340 3c7bd778e8c4f95dc7c7570968eed9d5 406 SUPERFAMILY SSF47090 11 83 1.1E-12 T 12-10-2018 IPR036365 PGBD-like superfamily JDM601_3576 4c40f017c6997b6cb9ba755a0ad10360 551 Gene3D G3DSA:3.90.700.10 276 484 2.2E-56 T 12-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 JDM601_3576 4c40f017c6997b6cb9ba755a0ad10360 551 PIRSF PIRSF036654 2 550 3.3E-298 T 12-10-2018 IPR014614 Uncharacterised conserved protein UCP036654 GO:0016627|GO:0055114 JDM601_3576 4c40f017c6997b6cb9ba755a0ad10360 551 Pfam PF00890 FAD binding domain 8 532 1.1E-106 T 12-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 JDM601_3576 4c40f017c6997b6cb9ba755a0ad10360 551 Gene3D G3DSA:3.50.50.60 8 546 2.2E-56 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_3576 4c40f017c6997b6cb9ba755a0ad10360 551 SUPERFAMILY SSF51905 4 549 7.41E-37 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_3519 b3842e2b859df473b5897bc758b39265 476 Pfam PF00171 Aldehyde dehydrogenase family 13 467 7.3E-148 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 JDM601_3519 b3842e2b859df473b5897bc758b39265 476 Gene3D G3DSA:3.40.309.10 248 437 8.8E-154 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 JDM601_3519 b3842e2b859df473b5897bc758b39265 476 Gene3D G3DSA:3.40.605.10 26 464 8.8E-154 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 JDM601_3519 b3842e2b859df473b5897bc758b39265 476 SUPERFAMILY SSF53720 3 468 1.7E-147 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 JDM601_3959 2a6700f8f9972a20de600ada523529bc 383 Pfam PF02374 Anion-transporting ATPase 24 327 7.4E-27 T 12-10-2018 IPR025723 Anion-transporting ATPase-like domain Reactome: R-HSA-381038 JDM601_3959 2a6700f8f9972a20de600ada523529bc 383 SUPERFAMILY SSF52540 21 291 6.16E-32 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_2102 067eaedfbe067cbcac32df3efca46299 564 Pfam PF00795 Carbon-nitrogen hydrolase 255 511 3.9E-18 T 12-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 JDM601_2102 067eaedfbe067cbcac32df3efca46299 564 TIGRFAM TIGR00546 lnt: apolipoprotein N-acyltransferase 84 490 1.2E-89 T 12-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 JDM601_2102 067eaedfbe067cbcac32df3efca46299 564 Gene3D G3DSA:3.60.110.10 248 520 6.2E-18 T 12-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily JDM601_2102 067eaedfbe067cbcac32df3efca46299 564 SUPERFAMILY SSF56317 252 520 3.01E-40 T 12-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily JDM601_2102 067eaedfbe067cbcac32df3efca46299 564 Hamap MF_01148 Apolipoprotein N-acyltransferase [lnt]. 29 528 14.394 T 12-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 JDM601_4060 d24e2a26520e9d2811519b4ff639188f 287 Gene3D G3DSA:3.40.50.1820 5 277 4.7E-61 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_4060 d24e2a26520e9d2811519b4ff639188f 287 PRINTS PR00412 Epoxide hydrolase signature 111 124 9.0E-17 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 JDM601_4060 d24e2a26520e9d2811519b4ff639188f 287 PRINTS PR00412 Epoxide hydrolase signature 253 275 9.0E-17 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 JDM601_4060 d24e2a26520e9d2811519b4ff639188f 287 PRINTS PR00412 Epoxide hydrolase signature 31 49 9.0E-17 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 JDM601_4060 d24e2a26520e9d2811519b4ff639188f 287 PRINTS PR00412 Epoxide hydrolase signature 51 66 9.0E-17 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 JDM601_4060 d24e2a26520e9d2811519b4ff639188f 287 PRINTS PR00412 Epoxide hydrolase signature 97 110 9.0E-17 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 JDM601_4060 d24e2a26520e9d2811519b4ff639188f 287 Pfam PF12697 Alpha/beta hydrolase family 27 270 9.7E-20 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 JDM601_4060 d24e2a26520e9d2811519b4ff639188f 287 SUPERFAMILY SSF53474 6 278 1.41E-58 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_1399 302b5a691fc9639ac5fa73ddf77d32b3 216 SUPERFAMILY SSF48498 100 187 7.63E-7 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily JDM601_1399 302b5a691fc9639ac5fa73ddf77d32b3 216 Gene3D G3DSA:1.10.357.10 68 215 2.8E-41 T 12-10-2018 JDM601_1399 302b5a691fc9639ac5fa73ddf77d32b3 216 Gene3D G3DSA:1.10.10.60 24 66 6.6E-22 T 12-10-2018 JDM601_1399 302b5a691fc9639ac5fa73ddf77d32b3 216 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 51 74 7.5E-12 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_1399 302b5a691fc9639ac5fa73ddf77d32b3 216 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 30 43 7.5E-12 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_1399 302b5a691fc9639ac5fa73ddf77d32b3 216 SUPERFAMILY SSF46689 17 98 7.7E-19 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JDM601_1399 302b5a691fc9639ac5fa73ddf77d32b3 216 Pfam PF00440 Bacterial regulatory proteins, tetR family 30 76 9.4E-18 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_0651 d3f68182184e763a42d642db1d967dd9 152 Gene3D G3DSA:3.40.30.10 19 152 2.6E-32 T 12-10-2018 JDM601_0651 d3f68182184e763a42d642db1d967dd9 152 SUPERFAMILY SSF52833 22 147 8.07E-29 T 12-10-2018 IPR036249 Thioredoxin-like superfamily JDM601_0651 d3f68182184e763a42d642db1d967dd9 152 Pfam PF00578 AhpC/TSA family 23 131 1.3E-12 T 12-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 JDM601_0651 d3f68182184e763a42d642db1d967dd9 152 ProSitePatterns PS00194 Thioredoxin family active site. 45 63 - T 12-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 JDM601_3786 c8bcb971b6b84f46d83270c922c66835 257 Gene3D G3DSA:3.90.226.10 4 254 1.3E-55 T 12-10-2018 JDM601_3786 c8bcb971b6b84f46d83270c922c66835 257 SUPERFAMILY SSF52096 3 257 8.96E-57 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily JDM601_3786 c8bcb971b6b84f46d83270c922c66835 257 Pfam PF00378 Enoyl-CoA hydratase/isomerase 12 231 1.3E-36 T 12-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 JDM601_3215 b1ff15343fbf48622516434f4e694a77 320 ProSitePatterns PS01247 Inosine-uridine preferring nucleoside hydrolase family signature. 8 18 - T 12-10-2018 IPR015910 Inosine/uridine-preferring nucleoside hydrolase, conserved site GO:0016799 JDM601_3215 b1ff15343fbf48622516434f4e694a77 320 SUPERFAMILY SSF53590 3 309 6.93E-78 T 12-10-2018 IPR036452 Ribonucleoside hydrolase-like JDM601_3215 b1ff15343fbf48622516434f4e694a77 320 Gene3D G3DSA:3.90.245.10 1 312 2.6E-90 T 12-10-2018 IPR036452 Ribonucleoside hydrolase-like JDM601_3215 b1ff15343fbf48622516434f4e694a77 320 Pfam PF01156 Inosine-uridine preferring nucleoside hydrolase 4 303 1.4E-72 T 12-10-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain JDM601_2549 3058d6e522ac2009efe86f8bd6958dfe 292 Gene3D G3DSA:3.30.2350.10 4 224 2.4E-91 T 12-10-2018 JDM601_2549 3058d6e522ac2009efe86f8bd6958dfe 292 SUPERFAMILY SSF55120 3 224 4.16E-73 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 JDM601_2549 3058d6e522ac2009efe86f8bd6958dfe 292 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 4 215 1.3E-69 T 12-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 JDM601_2549 3058d6e522ac2009efe86f8bd6958dfe 292 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 24 176 4.9E-53 T 12-10-2018 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 JDM601_2549 3058d6e522ac2009efe86f8bd6958dfe 292 Pfam PF09142 tRNA Pseudouridine synthase II, C terminal 233 288 3.0E-24 T 12-10-2018 IPR015225 tRNA pseudouridine synthase II, TruB, subfamily 2, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 JDM601_2549 3058d6e522ac2009efe86f8bd6958dfe 292 Gene3D G3DSA:2.30.130.10 225 287 5.7E-28 T 12-10-2018 IPR036974 PUA domain superfamily GO:0003723 JDM601_2549 3058d6e522ac2009efe86f8bd6958dfe 292 SUPERFAMILY SSF88697 233 289 6.96E-17 T 12-10-2018 IPR015947 PUA-like superfamily JDM601_2549 3058d6e522ac2009efe86f8bd6958dfe 292 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 2 287 17.712 T 12-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 JDM601_2549 3058d6e522ac2009efe86f8bd6958dfe 292 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 177 218 2.3E-11 T 12-10-2018 IPR032819 tRNA pseudouridylate synthase B, C-terminal Reactome: R-HSA-171319|Reactome: R-HSA-6790901 JDM601_0408 4a923639155d19bb54d8ddeeb4f6dbed 214 Gene3D G3DSA:2.30.130.40 1 109 5.3E-27 T 12-10-2018 JDM601_0408 4a923639155d19bb54d8ddeeb4f6dbed 214 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 2 199 1.5E-16 T 12-10-2018 IPR003111 Lon, substrate-binding domain JDM601_0408 4a923639155d19bb54d8ddeeb4f6dbed 214 SUPERFAMILY SSF88697 1 200 4.14E-35 T 12-10-2018 IPR015947 PUA-like superfamily JDM601_0408 4a923639155d19bb54d8ddeeb4f6dbed 214 SMART SM00464 2 201 4.1E-17 T 12-10-2018 IPR003111 Lon, substrate-binding domain JDM601_3159 2a8da3c6ea3340886625300906183644 340 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 16 26 - T 12-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 JDM601_3159 2a8da3c6ea3340886625300906183644 340 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 21 37 6.0E-27 T 12-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 JDM601_3159 2a8da3c6ea3340886625300906183644 340 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 202 212 6.0E-27 T 12-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 JDM601_3159 2a8da3c6ea3340886625300906183644 340 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 72 91 6.0E-27 T 12-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 JDM601_3159 2a8da3c6ea3340886625300906183644 340 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 149 170 6.0E-27 T 12-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 JDM601_3159 2a8da3c6ea3340886625300906183644 340 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 7 335 5.0E-101 T 12-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 JDM601_3159 2a8da3c6ea3340886625300906183644 340 Gene3D G3DSA:3.40.50.620 10 334 1.5E-125 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JDM601_3159 2a8da3c6ea3340886625300906183644 340 SUPERFAMILY SSF52374 9 335 1.03E-94 T 12-10-2018 JDM601_3159 2a8da3c6ea3340886625300906183644 340 Pfam PF00579 tRNA synthetases class I (W and Y) 7 290 2.4E-83 T 12-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 JDM601_3159 2a8da3c6ea3340886625300906183644 340 Gene3D G3DSA:1.10.240.10 193 303 1.5E-125 T 12-10-2018 JDM601_3159 2a8da3c6ea3340886625300906183644 340 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 7 336 40.901 T 12-10-2018 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2|Reactome: R-HSA-379726 JDM601_1041 3d7f30ea03f3359af07ea89822d9c7d6 428 Gene3D G3DSA:3.40.50.1010 1 140 1.2E-17 T 12-10-2018 JDM601_1041 3d7f30ea03f3359af07ea89822d9c7d6 428 SUPERFAMILY SSF52540 156 376 1.63E-20 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_1041 3d7f30ea03f3359af07ea89822d9c7d6 428 SMART SM00670 1 125 6.1E-14 T 12-10-2018 IPR002716 PIN domain JDM601_1041 3d7f30ea03f3359af07ea89822d9c7d6 428 Pfam PF13638 PIN domain 1 138 4.2E-28 T 12-10-2018 IPR002716 PIN domain JDM601_1041 3d7f30ea03f3359af07ea89822d9c7d6 428 Gene3D G3DSA:3.40.50.300 213 420 6.1E-52 T 12-10-2018 JDM601_1041 3d7f30ea03f3359af07ea89822d9c7d6 428 Pfam PF02562 PhoH-like protein 215 419 2.8E-52 T 12-10-2018 IPR003714 PhoH-like protein GO:0005524 JDM601_1041 3d7f30ea03f3359af07ea89822d9c7d6 428 SUPERFAMILY SSF88723 1 133 1.65E-6 T 12-10-2018 IPR029060 PIN-like domain superfamily JDM601_3089 88a184c810b0fb4166bc35c35b670a9c 171 Gene3D G3DSA:3.40.50.880 1 170 9.0E-46 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like JDM601_3089 88a184c810b0fb4166bc35c35b670a9c 171 SUPERFAMILY SSF52317 1 166 2.87E-39 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like JDM601_3089 88a184c810b0fb4166bc35c35b670a9c 171 Pfam PF01965 DJ-1/PfpI family 1 162 3.0E-46 T 12-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 JDM601_3089 88a184c810b0fb4166bc35c35b670a9c 171 TIGRFAM TIGR01382 PfpI: intracellular protease, PfpI family 2 164 1.5E-43 T 12-10-2018 IPR006286 Deglycase PfpI JDM601_0914 b102b308d161007c8bb81559b3478d9c 948 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 222 248 6.2E-36 T 12-10-2018 JDM601_0914 b102b308d161007c8bb81559b3478d9c 948 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 399 418 6.2E-36 T 12-10-2018 JDM601_0914 b102b308d161007c8bb81559b3478d9c 948 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 137 158 6.2E-36 T 12-10-2018 JDM601_0914 b102b308d161007c8bb81559b3478d9c 948 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 55 80 6.2E-36 T 12-10-2018 JDM601_0914 b102b308d161007c8bb81559b3478d9c 948 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 200 221 6.2E-36 T 12-10-2018 JDM601_0914 b102b308d161007c8bb81559b3478d9c 948 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 290 302 6.2E-36 T 12-10-2018 JDM601_0914 b102b308d161007c8bb81559b3478d9c 948 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 90 110 6.2E-36 T 12-10-2018 JDM601_0914 b102b308d161007c8bb81559b3478d9c 948 Pfam PF13244 Domain of unknown function (DUF4040) 592 656 1.9E-20 T 12-10-2018 IPR025383 Domain of unknown function DUF4040 JDM601_0914 b102b308d161007c8bb81559b3478d9c 948 Pfam PF04039 Domain related to MnhB subunit of Na+/H+ antiporter 798 920 2.9E-30 T 12-10-2018 IPR007182 Na+/H+ antiporter MnhB subunit-related protein JDM601_0914 b102b308d161007c8bb81559b3478d9c 948 Pfam PF00361 Proton-conducting membrane transporter 113 381 1.9E-58 T 12-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 JDM601_0914 b102b308d161007c8bb81559b3478d9c 948 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 42 81 1.9E-5 T 12-10-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 JDM601_1956 8983ca2dee62296e623d72fc760abdf2 410 Gene3D G3DSA:3.50.50.60 116 241 2.9E-107 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_1956 8983ca2dee62296e623d72fc760abdf2 410 SUPERFAMILY SSF51905 4 182 5.11E-47 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_1956 8983ca2dee62296e623d72fc760abdf2 410 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 148 166 4.5E-25 T 12-10-2018 JDM601_1956 8983ca2dee62296e623d72fc760abdf2 410 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 234 250 4.5E-25 T 12-10-2018 JDM601_1956 8983ca2dee62296e623d72fc760abdf2 410 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 103 121 4.5E-25 T 12-10-2018 JDM601_1956 8983ca2dee62296e623d72fc760abdf2 410 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 4.5E-25 T 12-10-2018 JDM601_1956 8983ca2dee62296e623d72fc760abdf2 410 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 260 282 4.5E-25 T 12-10-2018 JDM601_1956 8983ca2dee62296e623d72fc760abdf2 410 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 303 1.4E-59 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JDM601_1956 8983ca2dee62296e623d72fc760abdf2 410 SUPERFAMILY SSF55424 318 408 1.92E-24 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 JDM601_1956 8983ca2dee62296e623d72fc760abdf2 410 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 7.7E-16 T 12-10-2018 JDM601_1956 8983ca2dee62296e623d72fc760abdf2 410 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 235 249 7.7E-16 T 12-10-2018 JDM601_1956 8983ca2dee62296e623d72fc760abdf2 410 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 148 173 7.7E-16 T 12-10-2018 JDM601_1956 8983ca2dee62296e623d72fc760abdf2 410 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 275 282 7.7E-16 T 12-10-2018 JDM601_1956 8983ca2dee62296e623d72fc760abdf2 410 Gene3D G3DSA:3.30.390.30 324 410 1.7E-21 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 JDM601_1956 8983ca2dee62296e623d72fc760abdf2 410 Pfam PF14759 Reductase C-terminal 324 408 2.7E-15 T 12-10-2018 IPR028202 Reductase, C-terminal JDM601_1956 8983ca2dee62296e623d72fc760abdf2 410 Gene3D G3DSA:3.50.50.60 8 312 2.9E-107 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_1956 8983ca2dee62296e623d72fc760abdf2 410 SUPERFAMILY SSF51905 149 314 1.3E-29 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_1842 ce2952b211e92a9140b2520547a0d7a6 206 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 23 36 6.5E-8 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_1842 ce2952b211e92a9140b2520547a0d7a6 206 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 44 67 6.5E-8 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_1842 ce2952b211e92a9140b2520547a0d7a6 206 Pfam PF00440 Bacterial regulatory proteins, tetR family 23 69 2.0E-14 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_1842 ce2952b211e92a9140b2520547a0d7a6 206 SUPERFAMILY SSF46689 10 77 6.16E-17 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JDM601_1842 ce2952b211e92a9140b2520547a0d7a6 206 SUPERFAMILY SSF48498 88 199 3.16E-26 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily JDM601_1842 ce2952b211e92a9140b2520547a0d7a6 206 Gene3D G3DSA:1.10.357.10 71 199 4.7E-28 T 12-10-2018 JDM601_1842 ce2952b211e92a9140b2520547a0d7a6 206 Gene3D G3DSA:1.10.10.60 9 69 8.8E-24 T 12-10-2018 JDM601_1048 05a8f5d284b766538f853696281cf644 430 Gene3D G3DSA:1.20.1250.20 1 416 4.7E-76 T 12-10-2018 JDM601_1048 05a8f5d284b766538f853696281cf644 430 Pfam PF07690 Major Facilitator Superfamily 9 379 1.1E-42 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 JDM601_1048 05a8f5d284b766538f853696281cf644 430 SUPERFAMILY SSF103473 3 414 1.31E-77 T 12-10-2018 IPR036259 MFS transporter superfamily JDM601_1833 dfb46115c4ba4ff06f393be5a9a37d15 392 SUPERFAMILY SSF53383 10 384 1.17E-118 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase JDM601_1833 dfb46115c4ba4ff06f393be5a9a37d15 392 PIRSF PIRSF000521 114 147 0.26 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 JDM601_1833 dfb46115c4ba4ff06f393be5a9a37d15 392 PIRSF PIRSF000521 162 386 2.2E-32 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 JDM601_1833 dfb46115c4ba4ff06f393be5a9a37d15 392 PIRSF PIRSF000521 19 121 1.4E-5 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 JDM601_1833 dfb46115c4ba4ff06f393be5a9a37d15 392 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 10 386 68.284 T 12-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 JDM601_1833 dfb46115c4ba4ff06f393be5a9a37d15 392 Pfam PF00202 Aminotransferase class-III 15 379 3.2E-105 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 JDM601_1833 dfb46115c4ba4ff06f393be5a9a37d15 392 Gene3D G3DSA:3.40.640.10 54 293 4.1E-136 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 JDM601_1833 dfb46115c4ba4ff06f393be5a9a37d15 392 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 211 248 - T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 JDM601_1833 dfb46115c4ba4ff06f393be5a9a37d15 392 Gene3D G3DSA:3.90.1150.10 19 376 4.1E-136 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 JDM601_1833 dfb46115c4ba4ff06f393be5a9a37d15 392 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 11 383 1.8E-147 T 12-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 JDM601_2546 c5d3bfb04f930a16aad104756d89c971 401 Pfam PF02803 Thiolase, C-terminal domain 275 379 5.0E-10 T 12-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 JDM601_2546 c5d3bfb04f930a16aad104756d89c971 401 PIRSF PIRSF000429 1 397 4.7E-66 T 12-10-2018 IPR002155 Thiolase GO:0016747 JDM601_2546 c5d3bfb04f930a16aad104756d89c971 401 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 85 103 - T 12-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 JDM601_2546 c5d3bfb04f930a16aad104756d89c971 401 Gene3D G3DSA:3.40.47.10 4 399 1.8E-120 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 JDM601_2546 c5d3bfb04f930a16aad104756d89c971 401 Pfam PF00108 Thiolase, N-terminal domain 5 232 5.5E-19 T 12-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 JDM601_2546 c5d3bfb04f930a16aad104756d89c971 401 SUPERFAMILY SSF53901 266 387 6.06E-30 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 JDM601_2546 c5d3bfb04f930a16aad104756d89c971 401 ProSitePatterns PS00737 Thiolases signature 2. 338 354 - T 12-10-2018 IPR020613 Thiolase, conserved site GO:0016747 JDM601_2546 c5d3bfb04f930a16aad104756d89c971 401 SUPERFAMILY SSF53901 5 241 1.39E-47 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 JDM601_2282 8e78374fd093eaf648d3703cbd973945 652 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 406 570 4.0E-50 T 12-10-2018 IPR001162 UvrC family homology region JDM601_2282 8e78374fd093eaf648d3703cbd973945 652 Gene3D G3DSA:3.40.1440.10 7 103 2.3E-28 T 12-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 JDM601_2282 8e78374fd093eaf648d3703cbd973945 652 Gene3D G3DSA:1.10.150.20 578 637 2.0E-21 T 12-10-2018 JDM601_2282 8e78374fd093eaf648d3703cbd973945 652 SUPERFAMILY SSF46600 194 247 4.45E-14 T 12-10-2018 IPR036876 UVR domain superfamily JDM601_2282 8e78374fd093eaf648d3703cbd973945 652 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 13 617 1.7E-152 T 12-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 JDM601_2282 8e78374fd093eaf648d3703cbd973945 652 SUPERFAMILY SSF82771 18 101 4.58E-22 T 12-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 JDM601_2282 8e78374fd093eaf648d3703cbd973945 652 Pfam PF14520 Helix-hairpin-helix domain 586 637 3.5E-10 T 12-10-2018 JDM601_2282 8e78374fd093eaf648d3703cbd973945 652 Gene3D G3DSA:3.30.420.340 399 577 3.7E-54 T 12-10-2018 IPR038476 UvrC homology region 2 superfamily JDM601_2282 8e78374fd093eaf648d3703cbd973945 652 SUPERFAMILY SSF47781 526 637 4.13E-25 T 12-10-2018 IPR010994 RuvA domain 2-like JDM601_2282 8e78374fd093eaf648d3703cbd973945 652 SMART SM00465 17 99 7.4E-22 T 12-10-2018 IPR000305 GIY-YIG endonuclease JDM601_2282 8e78374fd093eaf648d3703cbd973945 652 Pfam PF02151 UvrB/uvrC motif 208 242 3.9E-9 T 12-10-2018 IPR001943 UVR domain GO:0005515 JDM601_2282 8e78374fd093eaf648d3703cbd973945 652 SMART SM00278 616 635 0.0044 T 12-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 JDM601_2282 8e78374fd093eaf648d3703cbd973945 652 SMART SM00278 584 603 230.0 T 12-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 JDM601_2282 8e78374fd093eaf648d3703cbd973945 652 Pfam PF01541 GIY-YIG catalytic domain 18 92 1.8E-10 T 12-10-2018 IPR000305 GIY-YIG endonuclease JDM601_2282 8e78374fd093eaf648d3703cbd973945 652 Hamap MF_00203 UvrABC system protein C [uvrC]. 4 635 30.771 T 12-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 JDM601_2282 8e78374fd093eaf648d3703cbd973945 652 Gene3D G3DSA:4.10.860.10 201 245 5.5E-6 T 12-10-2018 JDM601_1590 d29c61d66c4c70506463f57763d489d0 270 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 83 263 1.1E-19 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 JDM601_1590 d29c61d66c4c70506463f57763d489d0 270 SUPERFAMILY SSF161098 5 270 4.71E-64 T 12-10-2018 IPR035906 MetI-like superfamily JDM601_1590 d29c61d66c4c70506463f57763d489d0 270 Gene3D G3DSA:1.10.3720.10 1 258 1.9E-62 T 12-10-2018 IPR035906 MetI-like superfamily JDM601_4044 138aaec780df106e012a676a5fc0e9e5 332 Gene3D G3DSA:3.30.200.20 2 93 1.7E-17 T 12-10-2018 JDM601_4044 138aaec780df106e012a676a5fc0e9e5 332 Pfam PF01636 Phosphotransferase enzyme family 14 247 1.9E-41 T 12-10-2018 IPR002575 Aminoglycoside phosphotransferase JDM601_4044 138aaec780df106e012a676a5fc0e9e5 332 SUPERFAMILY SSF56112 4 324 3.26E-52 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily JDM601_4044 138aaec780df106e012a676a5fc0e9e5 332 Gene3D G3DSA:3.90.1200.10 100 331 8.8E-61 T 12-10-2018 JDM601_3386 fac7d1ab7698aef9a45f5f77157eda0a 390 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 9 119 9.2E-10 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 JDM601_3386 fac7d1ab7698aef9a45f5f77157eda0a 390 SUPERFAMILY SSF47203 257 379 2.86E-7 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 JDM601_3386 fac7d1ab7698aef9a45f5f77157eda0a 390 Gene3D G3DSA:1.20.140.10 234 382 2.1E-12 T 12-10-2018 JDM601_3386 fac7d1ab7698aef9a45f5f77157eda0a 390 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 124 216 2.1E-20 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 JDM601_3386 fac7d1ab7698aef9a45f5f77157eda0a 390 SUPERFAMILY SSF56645 6 240 3.14E-51 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 JDM601_3386 fac7d1ab7698aef9a45f5f77157eda0a 390 Gene3D G3DSA:2.40.110.10 123 233 2.9E-31 T 12-10-2018 JDM601_3386 fac7d1ab7698aef9a45f5f77157eda0a 390 Gene3D G3DSA:1.10.540.10 6 121 1.8E-12 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 JDM601_2380 72f67afd4facfed7151130f85be5eb28 185 SUPERFAMILY SSF53098 2 158 2.81E-43 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily JDM601_2380 72f67afd4facfed7151130f85be5eb28 185 Gene3D G3DSA:3.30.420.10 1 162 4.8E-49 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 JDM601_2380 72f67afd4facfed7151130f85be5eb28 185 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 3 155 4.6E-33 T 12-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 JDM601_2380 72f67afd4facfed7151130f85be5eb28 185 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 4 17 2.1E-40 T 12-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 JDM601_2380 72f67afd4facfed7151130f85be5eb28 185 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 140 152 2.1E-40 T 12-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 JDM601_2380 72f67afd4facfed7151130f85be5eb28 185 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 84 100 2.1E-40 T 12-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 JDM601_2380 72f67afd4facfed7151130f85be5eb28 185 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 108 127 2.1E-40 T 12-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 JDM601_2380 72f67afd4facfed7151130f85be5eb28 185 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 62 78 2.1E-40 T 12-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 JDM601_2380 72f67afd4facfed7151130f85be5eb28 185 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 3 152 1.1E-61 T 12-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 JDM601_2380 72f67afd4facfed7151130f85be5eb28 185 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 114 149 - T 12-10-2018 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 JDM601_2380 72f67afd4facfed7151130f85be5eb28 185 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 1 155 45.184 T 12-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 JDM601_2607 92bdfea3ff2708787095f0ef9c70f020 493 SUPERFAMILY SSF56762 154 492 2.35E-82 T 12-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 JDM601_2607 92bdfea3ff2708787095f0ef9c70f020 493 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 59 120 2.0E-17 T 12-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 JDM601_2607 92bdfea3ff2708787095f0ef9c70f020 493 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 264 411 1.9E-19 T 12-10-2018 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 JDM601_2607 92bdfea3ff2708787095f0ef9c70f020 493 Pfam PF00374 Nickel-dependent hydrogenase 182 249 9.6E-8 T 12-10-2018 IPR001501 Nickel-dependent hydrogenase, large subunit GO:0016151 JDM601_2607 92bdfea3ff2708787095f0ef9c70f020 493 Gene3D G3DSA:3.30.460.80 11 103 9.9E-8 T 12-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 JDM601_2607 92bdfea3ff2708787095f0ef9c70f020 493 Gene3D G3DSA:1.10.645.20 145 492 7.0E-87 T 12-10-2018 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 JDM601_2607 92bdfea3ff2708787095f0ef9c70f020 493 ProSitePatterns PS00542 Respiratory chain NADH dehydrogenase 30 Kd subunit signature. 84 105 - T 12-10-2018 IPR020396 NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 JDM601_2607 92bdfea3ff2708787095f0ef9c70f020 493 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 14 121 5.0E-17 T 12-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 JDM601_2607 92bdfea3ff2708787095f0ef9c70f020 493 SUPERFAMILY SSF143243 11 158 5.36E-31 T 12-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 JDM601_2745 e81e34c4533d2a0b72b3c27adbdd1566 241 SUPERFAMILY SSF51735 6 237 6.67E-79 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_2745 e81e34c4533d2a0b72b3c27adbdd1566 241 Gene3D G3DSA:3.40.50.720 1 240 7.7E-82 T 12-10-2018 JDM601_2745 e81e34c4533d2a0b72b3c27adbdd1566 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 75 86 4.3E-40 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2745 e81e34c4533d2a0b72b3c27adbdd1566 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 202 222 4.3E-40 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2745 e81e34c4533d2a0b72b3c27adbdd1566 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 169 186 4.3E-40 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2745 e81e34c4533d2a0b72b3c27adbdd1566 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 148 167 4.3E-40 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2745 e81e34c4533d2a0b72b3c27adbdd1566 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 4.3E-40 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2745 e81e34c4533d2a0b72b3c27adbdd1566 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 122 138 4.3E-40 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2745 e81e34c4533d2a0b72b3c27adbdd1566 241 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 135 163 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 JDM601_2745 e81e34c4533d2a0b72b3c27adbdd1566 241 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 237 3.7E-59 T 12-10-2018 JDM601_2745 e81e34c4533d2a0b72b3c27adbdd1566 241 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 148 167 9.9E-11 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2745 e81e34c4533d2a0b72b3c27adbdd1566 241 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 128 136 9.9E-11 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2745 e81e34c4533d2a0b72b3c27adbdd1566 241 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 75 86 9.9E-11 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2745 e81e34c4533d2a0b72b3c27adbdd1566 241 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 196 1.2E-5 T 12-10-2018 JDM601_0866 770e77a3a5f8a4bd336b340a4ce4e95f 586 Pfam PF00174 Oxidoreductase molybdopterin binding domain 421 561 7.0E-34 T 12-10-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 JDM601_0866 770e77a3a5f8a4bd336b340a4ce4e95f 586 SUPERFAMILY SSF56524 398 580 4.84E-50 T 12-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 JDM601_0866 770e77a3a5f8a4bd336b340a4ce4e95f 586 Gene3D G3DSA:3.90.420.10 408 582 8.4E-52 T 12-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 JDM601_0866 770e77a3a5f8a4bd336b340a4ce4e95f 586 Pfam PF01292 Prokaryotic cytochrome b561 95 328 6.7E-18 T 12-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 JDM601_0866 770e77a3a5f8a4bd336b340a4ce4e95f 586 Gene3D G3DSA:1.20.950.20 169 324 3.5E-8 T 12-10-2018 JDM601_0866 770e77a3a5f8a4bd336b340a4ce4e95f 586 SUPERFAMILY SSF81342 94 332 5.81E-16 T 12-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 JDM601_1152 7a6fd1bb2d776b3be0570d2fcd84d614 249 Gene3D G3DSA:1.20.950.20 8 223 8.8E-75 T 12-10-2018 JDM601_1152 7a6fd1bb2d776b3be0570d2fcd84d614 249 Pfam PF02665 Nitrate reductase gamma subunit 11 231 6.7E-86 T 12-10-2018 IPR023234 NarG-like domain JDM601_1152 7a6fd1bb2d776b3be0570d2fcd84d614 249 TIGRFAM TIGR00351 narI: respiratory nitrate reductase, gamma subunit 11 231 6.0E-57 T 12-10-2018 IPR003816 Nitrate reductase, gamma subunit GO:0008940|GO:0009325|GO:0055114 JDM601_1152 7a6fd1bb2d776b3be0570d2fcd84d614 249 SUPERFAMILY SSF103501 12 231 5.23E-63 T 12-10-2018 IPR036197 NarG-like superfamily JDM601_2645 4cab4e7e6216a8139ec05603ecb6b1c4 239 Pfam PF00293 NUDIX domain 78 177 1.0E-14 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 JDM601_2645 4cab4e7e6216a8139ec05603ecb6b1c4 239 PRINTS PR00502 NUDIX hydrolase family signature 97 111 5.0E-7 T 12-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 JDM601_2645 4cab4e7e6216a8139ec05603ecb6b1c4 239 PRINTS PR00502 NUDIX hydrolase family signature 111 126 5.0E-7 T 12-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 JDM601_2645 4cab4e7e6216a8139ec05603ecb6b1c4 239 SUPERFAMILY SSF55811 68 179 1.35E-25 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 JDM601_2645 4cab4e7e6216a8139ec05603ecb6b1c4 239 ProSitePatterns PS00893 Nudix box signature. 102 123 - T 12-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 JDM601_0496 a4cab7bab06eac52dd0b584864baebe4 52 SUPERFAMILY SSF46955 2 47 8.79E-5 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily JDM601_0496 a4cab7bab06eac52dd0b584864baebe4 52 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 1 45 3.3E-18 T 12-10-2018 IPR010093 SinI-like, DNA-binding domain GO:0003677 JDM601_0496 a4cab7bab06eac52dd0b584864baebe4 52 Pfam PF12728 Helix-turn-helix domain 1 45 2.5E-12 T 12-10-2018 JDM601_0496 a4cab7bab06eac52dd0b584864baebe4 52 Gene3D G3DSA:1.10.1660.10 1 47 4.7E-10 T 12-10-2018 JDM601_2574 6544a9bfaea4bf28fe2c1f886f052e2b 598 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 292 458 1.2E-17 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 JDM601_2574 6544a9bfaea4bf28fe2c1f886f052e2b 598 SUPERFAMILY SSF56645 37 269 5.5E-45 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 JDM601_2574 6544a9bfaea4bf28fe2c1f886f052e2b 598 SUPERFAMILY SSF47203 296 477 1.47E-39 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 JDM601_2574 6544a9bfaea4bf28fe2c1f886f052e2b 598 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 162 269 6.6E-14 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 JDM601_2574 6544a9bfaea4bf28fe2c1f886f052e2b 598 Gene3D G3DSA:2.40.110.10 160 296 2.1E-22 T 12-10-2018 JDM601_2574 6544a9bfaea4bf28fe2c1f886f052e2b 598 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 479 593 2.3E-27 T 12-10-2018 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain JDM601_2574 6544a9bfaea4bf28fe2c1f886f052e2b 598 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 46 156 1.4E-6 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 JDM601_2574 6544a9bfaea4bf28fe2c1f886f052e2b 598 Gene3D G3DSA:1.10.540.10 24 158 5.3E-10 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 JDM601_2574 6544a9bfaea4bf28fe2c1f886f052e2b 598 Gene3D G3DSA:1.20.140.10 297 471 1.6E-41 T 12-10-2018 JDM601_2574 6544a9bfaea4bf28fe2c1f886f052e2b 598 Pfam PF12418 Acyl-CoA dehydrogenase N terminal 5 34 2.0E-9 T 12-10-2018 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria JDM601_3058 9018dc03d82d707a6ce31665c99a913b 334 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 138 166 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 JDM601_3058 9018dc03d82d707a6ce31665c99a913b 334 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 189 2.2E-4 T 12-10-2018 JDM601_3058 9018dc03d82d707a6ce31665c99a913b 334 Pfam PF00106 short chain dehydrogenase 3 189 2.4E-43 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3058 9018dc03d82d707a6ce31665c99a913b 334 Gene3D G3DSA:3.40.50.720 2 263 2.0E-57 T 12-10-2018 JDM601_3058 9018dc03d82d707a6ce31665c99a913b 334 SUPERFAMILY SSF51735 3 256 1.6E-57 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_3058 9018dc03d82d707a6ce31665c99a913b 334 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 1.5E-17 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3058 9018dc03d82d707a6ce31665c99a913b 334 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 1.5E-17 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3058 9018dc03d82d707a6ce31665c99a913b 334 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 1.5E-17 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3058 9018dc03d82d707a6ce31665c99a913b 334 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 204 224 1.5E-17 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3058 9018dc03d82d707a6ce31665c99a913b 334 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 1.5E-17 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_1487 d2c6dc1f6ad226302a9fabf444509b47 215 Pfam PF01467 Cytidylyltransferase-like 2 166 3.0E-32 T 12-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 JDM601_1487 d2c6dc1f6ad226302a9fabf444509b47 215 SUPERFAMILY SSF52374 2 192 5.0E-48 T 12-10-2018 JDM601_1487 d2c6dc1f6ad226302a9fabf444509b47 215 TIGRFAM TIGR00482 TIGR00482: nicotinate (nicotinamide) nucleotide adenylyltransferase 1 191 6.8E-58 T 12-10-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 JDM601_1487 d2c6dc1f6ad226302a9fabf444509b47 215 Gene3D G3DSA:3.40.50.620 1 191 8.1E-60 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JDM601_1487 d2c6dc1f6ad226302a9fabf444509b47 215 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 1 192 26.439 T 12-10-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 JDM601_1487 d2c6dc1f6ad226302a9fabf444509b47 215 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 2 61 6.6E-10 T 12-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 JDM601_0833 2c7cc75db3ed544fd0ee125b5a1eb0a3 272 Pfam PF00296 Luciferase-like monooxygenase 8 197 5.7E-24 T 12-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 JDM601_0833 2c7cc75db3ed544fd0ee125b5a1eb0a3 272 Gene3D G3DSA:3.20.20.30 127 272 1.0E-13 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 JDM601_0833 2c7cc75db3ed544fd0ee125b5a1eb0a3 272 Gene3D G3DSA:3.20.20.30 5 126 3.1E-29 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 JDM601_0833 2c7cc75db3ed544fd0ee125b5a1eb0a3 272 SUPERFAMILY SSF51679 4 269 7.95E-42 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 JDM601_0833 2c7cc75db3ed544fd0ee125b5a1eb0a3 272 TIGRFAM TIGR03621 F420_MSMEG_2516: probable F420-dependent oxidoreductase, MSMEG_2516 family 5 272 3.8E-101 T 12-10-2018 IPR019923 Luciferase-like, F420-dependent oxidoreductase, MSMEG2516, predicted JDM601_2725 c3f0b792f928709ff536e897d89a1782 129 ProDom PD072817 ANTIGEN WEIGHT MOLECULAR LOW CFP-6 CGL1269 SEQUENCING DIRECT 18 129 2.0E-35 T 12-10-2018 IPR020535 Low molecular weight antigen Cfp6 JDM601_2725 c3f0b792f928709ff536e897d89a1782 129 Pfam PF10756 Bacterial PH domain 56 126 2.6E-17 T 12-10-2018 IPR019692 Protein of unknown function DUF2581 JDM601_2122 6146a295e5312cb8155f32af4aea81a5 108 SUPERFAMILY SSF103481 9 106 2.75E-7 T 12-10-2018 JDM601_2122 6146a295e5312cb8155f32af4aea81a5 108 Hamap MF_00010 UPF0060 membrane protein YnfA [ynfA]. 3 108 21.049 T 12-10-2018 IPR003844 Uncharacterised protein family UPF0060 GO:0016020 JDM601_2122 6146a295e5312cb8155f32af4aea81a5 108 Pfam PF02694 Uncharacterised BCR, YnfA/UPF0060 family 2 108 7.2E-44 T 12-10-2018 IPR003844 Uncharacterised protein family UPF0060 GO:0016020 JDM601_0954 87947d85297bf456525fc936e4fa24ca 337 SUPERFAMILY SSF55729 156 298 6.97E-18 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase JDM601_0954 87947d85297bf456525fc936e4fa24ca 337 SMART SM00100 23 143 2.1E-17 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain JDM601_0954 87947d85297bf456525fc936e4fa24ca 337 Pfam PF00027 Cyclic nucleotide-binding domain 46 126 6.4E-12 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain JDM601_0954 87947d85297bf456525fc936e4fa24ca 337 ProSitePatterns PS00889 Cyclic nucleotide-binding domain signature 2. 90 107 - T 12-10-2018 IPR018488 Cyclic nucleotide-binding, conserved site JDM601_0954 87947d85297bf456525fc936e4fa24ca 337 Gene3D G3DSA:3.40.630.30 149 337 2.9E-45 T 12-10-2018 JDM601_0954 87947d85297bf456525fc936e4fa24ca 337 Pfam PF13302 Acetyltransferase (GNAT) domain 159 292 5.3E-9 T 12-10-2018 IPR000182 GNAT domain JDM601_0954 87947d85297bf456525fc936e4fa24ca 337 Gene3D G3DSA:2.60.120.10 4 148 4.5E-36 T 12-10-2018 IPR014710 RmlC-like jelly roll fold JDM601_0954 87947d85297bf456525fc936e4fa24ca 337 SUPERFAMILY SSF51206 18 142 2.23E-18 T 12-10-2018 IPR018490 Cyclic nucleotide-binding-like JDM601_1603 ea6355b8739df905a0c6e78aaceefd81 127 Pfam PF13564 DoxX-like family 7 114 1.5E-17 T 12-10-2018 IPR032808 DoxX family JDM601_3029 3fee218e6968ab6411e80174666e7a0b 375 Gene3D G3DSA:3.40.640.10 38 270 2.7E-114 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 JDM601_3029 3fee218e6968ab6411e80174666e7a0b 375 SUPERFAMILY SSF53383 10 373 5.18E-72 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase JDM601_3029 3fee218e6968ab6411e80174666e7a0b 375 PIRSF PIRSF000524 17 375 6.9E-45 T 12-10-2018 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832|Reactome: R-HSA-389661|Reactome: R-HSA-9033241 JDM601_3029 3fee218e6968ab6411e80174666e7a0b 375 Gene3D G3DSA:3.90.1150.10 271 369 2.7E-114 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 JDM601_3029 3fee218e6968ab6411e80174666e7a0b 375 Pfam PF00266 Aminotransferase class-V 22 308 3.9E-14 T 12-10-2018 IPR000192 Aminotransferase class V domain JDM601_2875 a2623b0bbdce6bc406236ed7fe847f33 162 SMART SM00903 10 157 4.6E-26 T 12-10-2018 IPR002563 Flavin reductase like domain GO:0010181 JDM601_2875 a2623b0bbdce6bc406236ed7fe847f33 162 Pfam PF01613 Flavin reductase like domain 17 142 2.0E-19 T 12-10-2018 IPR002563 Flavin reductase like domain GO:0010181 JDM601_2875 a2623b0bbdce6bc406236ed7fe847f33 162 SUPERFAMILY SSF50475 2 150 1.79E-37 T 12-10-2018 JDM601_2875 a2623b0bbdce6bc406236ed7fe847f33 162 Gene3D G3DSA:2.30.110.10 8 157 1.2E-29 T 12-10-2018 IPR012349 FMN-binding split barrel GO:0048037 JDM601_2757 cf6948d3598114707f94991579fd7ab2 377 Gene3D G3DSA:3.30.470.20 73 374 9.3E-26 T 12-10-2018 JDM601_2757 cf6948d3598114707f94991579fd7ab2 377 SUPERFAMILY SSF56059 77 275 2.65E-20 T 12-10-2018 JDM601_4115 21cbad5bccd107bc6388d8f7f27ddc2d 195 Pfam PF06965 Na+/H+ antiporter 1 1 168 1.1E-60 T 12-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 JDM601_4115 21cbad5bccd107bc6388d8f7f27ddc2d 195 Gene3D G3DSA:1.20.1530.10 1 185 7.9E-60 T 12-10-2018 IPR023171 Na/H antiporter domain superfamily JDM601_4242 2763620a6a214700e8be5314470f5ba2 323 Gene3D G3DSA:3.10.129.90 30 314 4.4E-75 T 12-10-2018 JDM601_4242 2763620a6a214700e8be5314470f5ba2 323 Pfam PF13622 Thioesterase-like superfamily 57 310 8.4E-47 T 12-10-2018 JDM601_4242 2763620a6a214700e8be5314470f5ba2 323 SUPERFAMILY SSF54637 151 312 1.72E-37 T 12-10-2018 IPR029069 HotDog domain superfamily JDM601_4242 2763620a6a214700e8be5314470f5ba2 323 SUPERFAMILY SSF54637 34 138 1.33E-29 T 12-10-2018 IPR029069 HotDog domain superfamily JDM601_0535 d75c96802964d3246acc8d7b2d26cb05 366 SUPERFAMILY SSF56801 18 364 6.8E-74 T 12-10-2018 JDM601_0535 d75c96802964d3246acc8d7b2d26cb05 366 Pfam PF13193 AMP-binding enzyme C-terminal domain 280 354 2.3E-18 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain JDM601_0535 d75c96802964d3246acc8d7b2d26cb05 366 Gene3D G3DSA:3.40.50.12780 11 263 5.7E-48 T 12-10-2018 JDM601_0535 d75c96802964d3246acc8d7b2d26cb05 366 ProSitePatterns PS00455 Putative AMP-binding domain signature. 47 58 - T 12-10-2018 IPR020845 AMP-binding, conserved site JDM601_0535 d75c96802964d3246acc8d7b2d26cb05 366 Gene3D G3DSA:3.30.300.310 266 366 1.2E-23 T 12-10-2018 JDM601_0535 d75c96802964d3246acc8d7b2d26cb05 366 Pfam PF00501 AMP-binding enzyme 38 270 2.7E-31 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 JDM601_3920 e33877c95ef284a9adb10fde8398faf8 314 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 133 161 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 JDM601_3920 e33877c95ef284a9adb10fde8398faf8 314 Gene3D G3DSA:3.90.25.10 178 305 5.0E-101 T 12-10-2018 JDM601_3920 e33877c95ef284a9adb10fde8398faf8 314 SUPERFAMILY SSF51735 2 310 9.16E-92 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_3920 e33877c95ef284a9adb10fde8398faf8 314 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 304 6.3E-58 T 12-10-2018 IPR016040 NAD(P)-binding domain JDM601_3920 e33877c95ef284a9adb10fde8398faf8 314 Gene3D G3DSA:3.40.50.720 4 241 5.0E-101 T 12-10-2018 JDM601_1028 21e86da82e8f2a2ffc680d11f99883af 289 SUPERFAMILY SSF102588 3 288 2.88E-71 T 12-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 JDM601_1028 21e86da82e8f2a2ffc680d11f99883af 289 Hamap MF_01482 Mycothiol S-conjugate amidase [mca]. 7 287 51.617 T 12-10-2018 IPR017811 Mycothiol S-conjugate amidase Mca GO:0010126 JDM601_1028 21e86da82e8f2a2ffc680d11f99883af 289 Gene3D G3DSA:3.40.50.10320 2 289 3.1E-78 T 12-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 JDM601_1028 21e86da82e8f2a2ffc680d11f99883af 289 Pfam PF02585 GlcNAc-PI de-N-acetylase 7 152 4.0E-26 T 12-10-2018 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related Reactome: R-HSA-162710 JDM601_1028 21e86da82e8f2a2ffc680d11f99883af 289 TIGRFAM TIGR03446 mycothiol_Mca: mycothiol conjugate amidase Mca 4 286 1.2E-154 T 12-10-2018 IPR017811 Mycothiol S-conjugate amidase Mca GO:0010126 JDM601_1748 5120e80e3bde2db88ba4c63b3954763f 221 Pfam PF04472 Cell division protein SepF 133 204 2.5E-24 T 12-10-2018 IPR007561 Cell division protein SepF/SepF-related GO:0090529 JDM601_1748 5120e80e3bde2db88ba4c63b3954763f 221 Gene3D G3DSA:3.30.110.150 130 212 1.5E-26 T 12-10-2018 IPR038594 SepF-like superfamily JDM601_1748 5120e80e3bde2db88ba4c63b3954763f 221 Hamap MF_01197 Cell division protein SepF [sepF]. 2 212 21.233 T 12-10-2018 IPR023052 Cell division protein SepF GO:0090529 JDM601_4315 1d3389d38eb52a73f36db421f2526abd 363 SUPERFAMILY SSF55347 194 306 1.7E-34 T 12-10-2018 JDM601_4315 1d3389d38eb52a73f36db421f2526abd 363 PIRSF PIRSF015578 1 362 1.2E-94 T 12-10-2018 IPR002587 Myo-inositol-1-phosphate synthase GO:0004512|GO:0006021|GO:0008654 KEGG: 00521+5.5.1.4|KEGG: 00562+5.5.1.4|MetaCyc: PWY-2301|MetaCyc: PWY-4661|MetaCyc: PWY-6372|MetaCyc: PWY-6580|MetaCyc: PWY-6664|Reactome: R-HSA-1855183 JDM601_4315 1d3389d38eb52a73f36db421f2526abd 363 TIGRFAM TIGR03450 mycothiol_INO1: inositol 1-phosphate synthase 8 361 6.2E-220 T 12-10-2018 IPR017815 Myo-inositol 1-phosphate synthase, actinobacteria JDM601_4315 1d3389d38eb52a73f36db421f2526abd 363 Pfam PF01658 Myo-inositol-1-phosphate synthase 195 307 2.9E-31 T 12-10-2018 IPR013021 Myo-inositol-1-phosphate synthase, GAPDH-like KEGG: 00521+5.5.1.4|KEGG: 00562+5.5.1.4|MetaCyc: PWY-2301|MetaCyc: PWY-4661|MetaCyc: PWY-6372|MetaCyc: PWY-6580|MetaCyc: PWY-6664|Reactome: R-HSA-1855183 JDM601_4315 1d3389d38eb52a73f36db421f2526abd 363 SUPERFAMILY SSF51735 7 363 6.14E-95 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_2685 ea5a62a8ead6f637597f8832474966b6 344 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 8 335 36.53 T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 JDM601_2685 ea5a62a8ead6f637597f8832474966b6 344 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 139 159 2.5E-46 T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 JDM601_2685 ea5a62a8ead6f637597f8832474966b6 344 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 62 89 2.5E-46 T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 JDM601_2685 ea5a62a8ead6f637597f8832474966b6 344 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 179 203 2.5E-46 T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 JDM601_2685 ea5a62a8ead6f637597f8832474966b6 344 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 204 228 2.5E-46 T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 JDM601_2685 ea5a62a8ead6f637597f8832474966b6 344 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 244 261 2.5E-46 T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 JDM601_2685 ea5a62a8ead6f637597f8832474966b6 344 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 12 29 2.5E-46 T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 JDM601_2685 ea5a62a8ead6f637597f8832474966b6 344 PIRSF PIRSF000114 3 344 6.7E-95 T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 JDM601_2685 ea5a62a8ead6f637597f8832474966b6 344 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 194 215 - T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 JDM601_2685 ea5a62a8ead6f637597f8832474966b6 344 SUPERFAMILY SSF48179 186 344 1.79E-48 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 JDM601_2685 ea5a62a8ead6f637597f8832474966b6 344 Gene3D G3DSA:1.10.1040.10 195 344 1.1E-45 T 12-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 JDM601_2685 ea5a62a8ead6f637597f8832474966b6 344 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 10 164 2.8E-51 T 12-10-2018 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 JDM601_2685 ea5a62a8ead6f637597f8832474966b6 344 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 186 333 6.3E-47 T 12-10-2018 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 JDM601_2685 ea5a62a8ead6f637597f8832474966b6 344 Gene3D G3DSA:3.40.50.720 3 193 8.7E-62 T 12-10-2018 JDM601_2685 ea5a62a8ead6f637597f8832474966b6 344 SUPERFAMILY SSF51735 10 184 8.79E-51 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_0087 c65b3799e6d00deef0a76ec40f57e4da 168 SUPERFAMILY SSF54427 3 136 1.66E-23 T 12-10-2018 IPR032710 NTF2-like domain superfamily JDM601_0087 c65b3799e6d00deef0a76ec40f57e4da 168 Gene3D G3DSA:3.10.450.50 7 146 9.8E-15 T 12-10-2018 JDM601_0087 c65b3799e6d00deef0a76ec40f57e4da 168 Pfam PF12680 SnoaL-like domain 23 126 2.1E-9 T 12-10-2018 IPR037401 SnoaL-like domain JDM601_1274 1484bb3f74121cd97f36eec030bf74ad 532 Gene3D G3DSA:3.40.190.10 37 513 2.9E-116 T 12-10-2018 JDM601_1274 1484bb3f74121cd97f36eec030bf74ad 532 Gene3D G3DSA:3.10.105.10 279 501 2.9E-116 T 12-10-2018 JDM601_1274 1484bb3f74121cd97f36eec030bf74ad 532 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 89 439 3.2E-50 T 12-10-2018 IPR000914 Solute-binding protein family 5 domain JDM601_1274 1484bb3f74121cd97f36eec030bf74ad 532 PIRSF PIRSF002741 3 528 9.0E-53 T 12-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 JDM601_1274 1484bb3f74121cd97f36eec030bf74ad 532 Gene3D G3DSA:3.90.76.10 64 176 2.9E-116 T 12-10-2018 JDM601_1274 1484bb3f74121cd97f36eec030bf74ad 532 SUPERFAMILY SSF53850 27 528 6.15E-82 T 12-10-2018 JDM601_0048 43bbe1b44f9b348822afdba9b34372bc 517 TIGRFAM TIGR03923 T7SS_EccE: type VII secretion protein EccE 20 338 3.3E-65 T 12-10-2018 IPR021368 Type VII secretion system protein EccE JDM601_0048 43bbe1b44f9b348822afdba9b34372bc 517 Pfam PF11203 Putative type VII ESX secretion system translocon, EccE 174 263 1.0E-18 T 12-10-2018 IPR021368 Type VII secretion system protein EccE JDM601_3771 52b864828b616979a2fecb58a77b3899 698 Pfam PF00384 Molybdopterin oxidoreductase 55 473 3.2E-26 T 12-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 JDM601_3771 52b864828b616979a2fecb58a77b3899 698 SMART SM00926 1 52 4.3E-9 T 12-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 JDM601_3771 52b864828b616979a2fecb58a77b3899 698 Gene3D G3DSA:3.40.50.740 65 478 4.7E-85 T 12-10-2018 JDM601_3771 52b864828b616979a2fecb58a77b3899 698 Gene3D G3DSA:2.20.25.90 1 57 4.8E-13 T 12-10-2018 JDM601_3771 52b864828b616979a2fecb58a77b3899 698 Gene3D G3DSA:2.40.40.20 548 697 1.4E-29 T 12-10-2018 JDM601_3771 52b864828b616979a2fecb58a77b3899 698 Gene3D G3DSA:3.40.228.10 130 328 4.7E-85 T 12-10-2018 JDM601_3771 52b864828b616979a2fecb58a77b3899 698 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 1 52 2.2E-11 T 12-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 JDM601_3771 52b864828b616979a2fecb58a77b3899 698 SUPERFAMILY SSF50692 557 693 3.39E-29 T 12-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily JDM601_3771 52b864828b616979a2fecb58a77b3899 698 Pfam PF01568 Molydopterin dinucleotide binding domain 565 683 2.7E-18 T 12-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 JDM601_3771 52b864828b616979a2fecb58a77b3899 698 SUPERFAMILY SSF53706 1 519 1.1E-104 T 12-10-2018 JDM601_4258 57789c50cf90cf5f2d8b44e4ee4acdc2 640 Gene3D G3DSA:3.50.50.60 459 622 6.9E-32 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_4258 57789c50cf90cf5f2d8b44e4ee4acdc2 640 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 142 164 1.2E-5 T 12-10-2018 JDM601_4258 57789c50cf90cf5f2d8b44e4ee4acdc2 640 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 311 336 1.2E-5 T 12-10-2018 JDM601_4258 57789c50cf90cf5f2d8b44e4ee4acdc2 640 SUPERFAMILY SSF51905 448 613 7.9E-14 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_4258 57789c50cf90cf5f2d8b44e4ee4acdc2 640 SUPERFAMILY SSF51905 138 380 5.34E-53 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_4258 57789c50cf90cf5f2d8b44e4ee4acdc2 640 Gene3D G3DSA:3.50.50.60 135 374 7.4E-64 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_4258 57789c50cf90cf5f2d8b44e4ee4acdc2 640 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 143 162 2.0E-5 T 12-10-2018 JDM601_4258 57789c50cf90cf5f2d8b44e4ee4acdc2 640 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 311 329 2.0E-5 T 12-10-2018 JDM601_4258 57789c50cf90cf5f2d8b44e4ee4acdc2 640 Pfam PF13738 Pyridine nucleotide-disulphide oxidoreductase 144 349 2.4E-16 T 12-10-2018 JDM601_3482 e6650e0013898b26257d095cb6e64aa0 66 Pfam PF13370 4Fe-4S single cluster domain of Ferredoxin I 2 43 4.6E-6 T 12-10-2018 JDM601_3482 e6650e0013898b26257d095cb6e64aa0 66 Gene3D G3DSA:3.30.70.20 1 46 5.9E-8 T 12-10-2018 JDM601_2954 04207747308260e0408cdc7badcf9ed8 449 Pfam PF09851 Short C-terminal domain 421 447 3.4E-7 T 12-10-2018 IPR018649 SHOCT domain JDM601_2954 04207747308260e0408cdc7badcf9ed8 449 Gene3D G3DSA:1.20.1260.20 1 173 1.4E-68 T 12-10-2018 IPR038332 PPE superfamily JDM601_2954 04207747308260e0408cdc7badcf9ed8 449 Pfam PF12484 Polymorphic PE/PPE proteins C terminal 298 369 3.4E-8 T 12-10-2018 IPR022171 PPE family, C-terminal JDM601_2954 04207747308260e0408cdc7badcf9ed8 449 SUPERFAMILY SSF140459 2 173 4.45E-63 T 12-10-2018 JDM601_2954 04207747308260e0408cdc7badcf9ed8 449 Pfam PF00823 PPE family 6 160 2.4E-60 T 12-10-2018 IPR000030 PPE family JDM601_1509 9e99b5f54ebf62ec0d2b9bcd6e3732af 255 Gene3D G3DSA:3.40.1000.70 37 252 2.6E-28 T 12-10-2018 IPR038232 PknH-like extracellular domain superfamily KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1 JDM601_1509 9e99b5f54ebf62ec0d2b9bcd6e3732af 255 Pfam PF14032 PknH-like extracellular domain 41 249 1.2E-39 T 12-10-2018 IPR026954 PknH-like extracellular domain KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1 JDM601_0819 fa18fa46b82b994a08072ae3ff245b03 334 Pfam PF00691 OmpA family 232 327 6.3E-21 T 12-10-2018 IPR006665 OmpA-like domain JDM601_0819 fa18fa46b82b994a08072ae3ff245b03 334 PRINTS PR01021 OMPA domain signature 263 278 1.6E-9 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 JDM601_0819 fa18fa46b82b994a08072ae3ff245b03 334 PRINTS PR01021 OMPA domain signature 278 294 1.6E-9 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 JDM601_0819 fa18fa46b82b994a08072ae3ff245b03 334 PRINTS PR01021 OMPA domain signature 233 255 1.6E-9 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 JDM601_0819 fa18fa46b82b994a08072ae3ff245b03 334 SUPERFAMILY SSF103088 223 333 9.94E-33 T 12-10-2018 IPR036737 OmpA-like domain superfamily JDM601_0819 fa18fa46b82b994a08072ae3ff245b03 334 Gene3D G3DSA:3.30.1330.60 206 334 4.2E-39 T 12-10-2018 IPR036737 OmpA-like domain superfamily JDM601_0819 fa18fa46b82b994a08072ae3ff245b03 334 Gene3D G3DSA:3.40.1520.20 58 167 2.7E-36 T 12-10-2018 JDM601_0819 fa18fa46b82b994a08072ae3ff245b03 334 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 166 184 9.0E-6 T 12-10-2018 JDM601_0819 fa18fa46b82b994a08072ae3ff245b03 334 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 316 334 9.0E-6 T 12-10-2018 JDM601_0819 fa18fa46b82b994a08072ae3ff245b03 334 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 296 315 9.0E-6 T 12-10-2018 JDM601_2911 3f7d9ffcb2dc28e4d7dd2293b54fea75 75 Pfam PF02467 Transcription factor WhiB 4 50 5.1E-15 T 12-10-2018 IPR034768 WhiB-like iron-sulfur binding domain JDM601_2911 3f7d9ffcb2dc28e4d7dd2293b54fea75 75 Hamap MF_01479 Transcriptional regulator WhiB [whiB]. 1 64 14.946 T 12-10-2018 IPR003482 Transcription factor WhiB JDM601_0931 2c511a75a80cf275745aff8ae31476fc 57 SUPERFAMILY SSF57829 1 38 3.66E-8 T 12-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 JDM601_0931 2c511a75a80cf275745aff8ae31476fc 57 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 48 4.2E-13 T 12-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JDM601_0931 2c511a75a80cf275745aff8ae31476fc 57 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 53 13.295 T 12-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JDM601_0931 2c511a75a80cf275745aff8ae31476fc 57 Pfam PF01783 Ribosomal L32p protein family 2 46 6.3E-13 T 12-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JDM601_1299 7ce978dc5567a03dabc4616e52bb419a 278 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 179 185 - T 12-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 JDM601_1299 7ce978dc5567a03dabc4616e52bb419a 278 Gene3D G3DSA:3.40.50.150 82 278 9.3E-48 T 12-10-2018 JDM601_1299 7ce978dc5567a03dabc4616e52bb419a 278 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 1 274 39.206 T 12-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 JDM601_1299 7ce978dc5567a03dabc4616e52bb419a 278 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 52 276 6.7E-42 T 12-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 JDM601_1299 7ce978dc5567a03dabc4616e52bb419a 278 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 23 270 3.0E-63 T 12-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 JDM601_1299 7ce978dc5567a03dabc4616e52bb419a 278 SUPERFAMILY SSF53335 3 271 2.46E-44 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JDM601_1299 7ce978dc5567a03dabc4616e52bb419a 278 Pfam PF05175 Methyltransferase small domain 107 196 7.2E-11 T 12-10-2018 IPR007848 Methyltransferase small domain GO:0008168 JDM601_1299 7ce978dc5567a03dabc4616e52bb419a 278 Gene3D G3DSA:1.10.8.10 1 81 9.6E-11 T 12-10-2018 JDM601_1622 f8015795d9bd63d63672c394bbb374c1 508 Pfam PF13193 AMP-binding enzyme C-terminal domain 419 497 4.4E-19 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain JDM601_1622 f8015795d9bd63d63672c394bbb374c1 508 Pfam PF00501 AMP-binding enzyme 6 410 9.3E-76 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 JDM601_1622 f8015795d9bd63d63672c394bbb374c1 508 SUPERFAMILY SSF56801 5 508 4.84E-128 T 12-10-2018 JDM601_1622 f8015795d9bd63d63672c394bbb374c1 508 Gene3D G3DSA:3.30.300.310 407 508 2.6E-30 T 12-10-2018 JDM601_1622 f8015795d9bd63d63672c394bbb374c1 508 Gene3D G3DSA:3.40.50.12780 4 402 6.8E-95 T 12-10-2018 JDM601_1622 f8015795d9bd63d63672c394bbb374c1 508 ProSitePatterns PS00455 Putative AMP-binding domain signature. 156 167 - T 12-10-2018 IPR020845 AMP-binding, conserved site JDM601_1188 9b38c25f377fa014d9a9ef1f09ed50ff 404 ProSitePatterns PS00808 ADP-glucose pyrophosphorylase signature 1. 13 32 - T 12-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 JDM601_1188 9b38c25f377fa014d9a9ef1f09ed50ff 404 Hamap MF_00624 Glucose-1-phosphate adenylyltransferase [glgC]. 4 404 47.361 T 12-10-2018 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 JDM601_1188 9b38c25f377fa014d9a9ef1f09ed50ff 404 Gene3D G3DSA:3.90.550.10 1 291 1.6E-82 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases JDM601_1188 9b38c25f377fa014d9a9ef1f09ed50ff 404 ProSitePatterns PS00810 ADP-glucose pyrophosphorylase signature 3. 196 206 - T 12-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 JDM601_1188 9b38c25f377fa014d9a9ef1f09ed50ff 404 SUPERFAMILY SSF53448 7 358 2.12E-71 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases JDM601_1188 9b38c25f377fa014d9a9ef1f09ed50ff 404 ProSitePatterns PS00809 ADP-glucose pyrophosphorylase signature 2. 98 106 - T 12-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 JDM601_1188 9b38c25f377fa014d9a9ef1f09ed50ff 404 TIGRFAM TIGR02091 glgC: glucose-1-phosphate adenylyltransferase 7 378 1.1E-143 T 12-10-2018 IPR011831 Glucose-1-phosphate adenylyltransferase GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 JDM601_1188 9b38c25f377fa014d9a9ef1f09ed50ff 404 Gene3D G3DSA:2.160.10.10 292 402 3.3E-33 T 12-10-2018 JDM601_1188 9b38c25f377fa014d9a9ef1f09ed50ff 404 Pfam PF00483 Nucleotidyl transferase 9 276 2.8E-71 T 12-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 JDM601_1188 9b38c25f377fa014d9a9ef1f09ed50ff 404 SUPERFAMILY SSF51161 301 398 6.79E-18 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily JDM601_0118 7810a47c976935fb76232b55261b67e2 143 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 7 133 3.0E-9 T 12-10-2018 IPR005031 Coenzyme Q-binding protein COQ10, START domain Reactome: R-HSA-611105 JDM601_0118 7810a47c976935fb76232b55261b67e2 143 SUPERFAMILY SSF55961 1 142 3.47E-24 T 12-10-2018 JDM601_0118 7810a47c976935fb76232b55261b67e2 143 Gene3D G3DSA:3.30.530.20 1 143 1.9E-15 T 12-10-2018 IPR023393 START-like domain superfamily JDM601_1669 6a2e7eee8399402608a4d1fde44b0328 311 SUPERFAMILY SSF53686 3 308 2.49E-103 T 12-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme JDM601_1669 6a2e7eee8399402608a4d1fde44b0328 311 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 9 294 1.8E-67 T 12-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme JDM601_1669 6a2e7eee8399402608a4d1fde44b0328 311 Gene3D G3DSA:3.40.50.1100 46 145 8.5E-124 T 12-10-2018 JDM601_1669 6a2e7eee8399402608a4d1fde44b0328 311 Gene3D G3DSA:3.40.50.1100 7 302 8.5E-124 T 12-10-2018 JDM601_1669 6a2e7eee8399402608a4d1fde44b0328 311 TIGRFAM TIGR01139 cysK: cysteine synthase A 9 306 7.4E-135 T 12-10-2018 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 JDM601_1669 6a2e7eee8399402608a4d1fde44b0328 311 TIGRFAM TIGR01136 cysKM: cysteine synthase 9 306 3.1E-131 T 12-10-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 JDM601_1669 6a2e7eee8399402608a4d1fde44b0328 311 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 34 52 - T 12-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 JDM601_2334 77bca27a9776af36f3fa2335981ece18 199 ProSitePatterns PS01128 Shikimate kinase signature. 51 76 - T 12-10-2018 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 JDM601_2334 77bca27a9776af36f3fa2335981ece18 199 SUPERFAMILY SSF52540 1 158 4.26E-25 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_2334 77bca27a9776af36f3fa2335981ece18 199 PRINTS PR01100 Shikimate kinase family signature 68 77 5.3E-10 T 12-10-2018 JDM601_2334 77bca27a9776af36f3fa2335981ece18 199 PRINTS PR01100 Shikimate kinase family signature 22 35 5.3E-10 T 12-10-2018 JDM601_2334 77bca27a9776af36f3fa2335981ece18 199 PRINTS PR01100 Shikimate kinase family signature 88 105 5.3E-10 T 12-10-2018 JDM601_2334 77bca27a9776af36f3fa2335981ece18 199 PRINTS PR01100 Shikimate kinase family signature 50 58 5.3E-10 T 12-10-2018 JDM601_2334 77bca27a9776af36f3fa2335981ece18 199 Gene3D G3DSA:3.40.50.300 1 170 3.9E-54 T 12-10-2018 JDM601_2334 77bca27a9776af36f3fa2335981ece18 199 Pfam PF01202 Shikimate kinase 4 159 2.8E-44 T 12-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 JDM601_2334 77bca27a9776af36f3fa2335981ece18 199 Hamap MF_00109 Shikimate kinase [aroK]. 1 160 23.113 T 12-10-2018 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 JDM601_3845 88381542a90d03107413f67a375d2d61 388 Gene3D G3DSA:1.10.12.10 330 388 1.5E-9 T 12-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal JDM601_3845 88381542a90d03107413f67a375d2d61 388 Gene3D G3DSA:3.90.226.10 125 328 7.8E-64 T 12-10-2018 JDM601_3845 88381542a90d03107413f67a375d2d61 388 Pfam PF00378 Enoyl-CoA hydratase/isomerase 143 387 7.4E-53 T 12-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 JDM601_3845 88381542a90d03107413f67a375d2d61 388 Gene3D G3DSA:2.40.50.840 36 113 2.3E-20 T 12-10-2018 JDM601_3845 88381542a90d03107413f67a375d2d61 388 SUPERFAMILY SSF52096 129 388 9.42E-74 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily JDM601_3845 88381542a90d03107413f67a375d2d61 388 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 228 248 - T 12-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 JDM601_1155 ac94be480b4f9c403d065c87422c1224 129 Gene3D G3DSA:1.10.10.10 3 126 1.7E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JDM601_1155 ac94be480b4f9c403d065c87422c1224 129 SUPERFAMILY SSF46785 13 122 7.8E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JDM601_1155 ac94be480b4f9c403d065c87422c1224 129 SMART SM00347 27 125 1.1E-7 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 JDM601_1155 ac94be480b4f9c403d065c87422c1224 129 Pfam PF12802 MarR family 33 93 2.7E-14 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 JDM601_4316 50c19f8bbc476ffcb6744608adfca9b3 291 Gene3D G3DSA:3.40.50.1820 4 290 8.7E-79 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_4316 50c19f8bbc476ffcb6744608adfca9b3 291 Pfam PF12697 Alpha/beta hydrolase family 48 284 3.7E-19 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 JDM601_4316 50c19f8bbc476ffcb6744608adfca9b3 291 PRINTS PR00111 Alpha/beta hydrolase fold signature 128 141 2.3E-8 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 JDM601_4316 50c19f8bbc476ffcb6744608adfca9b3 291 PRINTS PR00111 Alpha/beta hydrolase fold signature 236 250 2.3E-8 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 JDM601_4316 50c19f8bbc476ffcb6744608adfca9b3 291 PRINTS PR00111 Alpha/beta hydrolase fold signature 69 84 2.3E-8 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 JDM601_4316 50c19f8bbc476ffcb6744608adfca9b3 291 PRINTS PR00111 Alpha/beta hydrolase fold signature 114 127 2.3E-8 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 JDM601_4316 50c19f8bbc476ffcb6744608adfca9b3 291 SUPERFAMILY SSF53474 36 289 2.54E-43 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_3115 e26d13b8a418bf66451fe67f8686e87a 1509 Pfam PF08494 DEAD/H associated 653 845 6.3E-75 T 12-10-2018 IPR013701 DEAD/H associated GO:0005524|GO:0016818 JDM601_3115 e26d13b8a418bf66451fe67f8686e87a 1509 Pfam PF06224 Winged helix DNA-binding domain 895 1094 3.4E-6 T 12-10-2018 IPR009351 Protein of unknown function DUF1006 JDM601_3115 e26d13b8a418bf66451fe67f8686e87a 1509 SMART SM00487 23 243 6.3E-38 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain JDM601_3115 e26d13b8a418bf66451fe67f8686e87a 1509 SUPERFAMILY SSF52540 36 395 2.98E-49 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_3115 e26d13b8a418bf66451fe67f8686e87a 1509 Gene3D G3DSA:3.40.50.300 7 230 8.7E-59 T 12-10-2018 JDM601_3115 e26d13b8a418bf66451fe67f8686e87a 1509 Pfam PF00271 Helicase conserved C-terminal domain 327 392 2.0E-12 T 12-10-2018 IPR001650 Helicase, C-terminal JDM601_3115 e26d13b8a418bf66451fe67f8686e87a 1509 Pfam PF00270 DEAD/DEAH box helicase 28 212 1.6E-26 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 JDM601_3115 e26d13b8a418bf66451fe67f8686e87a 1509 Gene3D G3DSA:3.40.50.300 259 411 1.4E-25 T 12-10-2018 JDM601_3115 e26d13b8a418bf66451fe67f8686e87a 1509 SMART SM00382 40 379 0.0012 T 12-10-2018 IPR003593 AAA+ ATPase domain JDM601_3115 e26d13b8a418bf66451fe67f8686e87a 1509 SMART SM00490 317 392 8.6E-12 T 12-10-2018 IPR001650 Helicase, C-terminal JDM601_2671 4d77bf54e82c8ab3835cdd7ae44213ba 205 SMART SM00756 20 161 6.1E-55 T 12-10-2018 IPR012932 Vitamin K epoxide reductase Reactome: R-HSA-6806664 JDM601_2671 4d77bf54e82c8ab3835cdd7ae44213ba 205 Gene3D G3DSA:1.20.1440.130 17 171 4.2E-18 T 12-10-2018 IPR038354 VKOR domain superfamily Reactome: R-HSA-6806664 JDM601_2671 4d77bf54e82c8ab3835cdd7ae44213ba 205 Pfam PF07884 Vitamin K epoxide reductase family 26 157 7.0E-31 T 12-10-2018 IPR012932 Vitamin K epoxide reductase Reactome: R-HSA-6806664 JDM601_0214 5b22c89f1e0a8fcbd2659e06f1c78118 227 Gene3D G3DSA:1.10.357.10 1 197 3.3E-36 T 12-10-2018 JDM601_0214 5b22c89f1e0a8fcbd2659e06f1c78118 227 ProSitePatterns PS01081 TetR-type HTH domain signature. 29 59 - T 12-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site JDM601_0214 5b22c89f1e0a8fcbd2659e06f1c78118 227 Pfam PF00440 Bacterial regulatory proteins, tetR family 18 60 1.1E-11 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_0214 5b22c89f1e0a8fcbd2659e06f1c78118 227 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 38 61 1.6E-7 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_0214 5b22c89f1e0a8fcbd2659e06f1c78118 227 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 17 30 1.6E-7 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_0214 5b22c89f1e0a8fcbd2659e06f1c78118 227 SUPERFAMILY SSF46689 3 85 6.16E-16 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JDM601_0214 5b22c89f1e0a8fcbd2659e06f1c78118 227 SUPERFAMILY SSF48498 88 170 1.57E-8 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily JDM601_2972 1f4841dbac8a363806e2d2682a875620 231 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 27 122 2.6E-20 T 12-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 JDM601_2972 1f4841dbac8a363806e2d2682a875620 231 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 26 128 1.1E-27 T 12-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 JDM601_2972 1f4841dbac8a363806e2d2682a875620 231 Gene3D G3DSA:3.30.505.50 185 230 1.3E-19 T 12-10-2018 IPR038416 Sigma 54 modulation/S30EA ribosomal protein, C-terminal domain superfamily JDM601_2972 1f4841dbac8a363806e2d2682a875620 231 Pfam PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus 172 227 1.2E-24 T 12-10-2018 IPR032528 Sigma 54 modulation/S30EA ribosomal protein, C-terminal JDM601_2972 1f4841dbac8a363806e2d2682a875620 231 Gene3D G3DSA:3.30.160.100 26 126 7.7E-22 T 12-10-2018 IPR036567 Ribosome hibernation promotion factor-like JDM601_2972 1f4841dbac8a363806e2d2682a875620 231 SUPERFAMILY SSF69754 26 134 3.92E-23 T 12-10-2018 IPR036567 Ribosome hibernation promotion factor-like JDM601_2972 1f4841dbac8a363806e2d2682a875620 231 Hamap MF_00839 Ribosome hibernation promoting factor [hpf]. 25 231 22.402 T 12-10-2018 IPR034694 Ribosome hibernation promoting factor, long/plastid JDM601_3498 d3c0bb2d55a539e2cccbf0604e32c14f 69 SUPERFAMILY SSF54862 5 66 9.14E-10 T 12-10-2018 JDM601_3498 d3c0bb2d55a539e2cccbf0604e32c14f 69 Gene3D G3DSA:3.30.70.20 2 67 5.0E-15 T 12-10-2018 JDM601_3498 d3c0bb2d55a539e2cccbf0604e32c14f 69 Pfam PF13459 4Fe-4S single cluster domain 6 64 1.1E-9 T 12-10-2018 JDM601_0662 f2cd0a8fbf58155cbab79f2e4e2e96e7 264 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 72 264 23.477 T 12-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 JDM601_0662 f2cd0a8fbf58155cbab79f2e4e2e96e7 264 Gene3D G3DSA:3.30.70.940 69 187 1.2E-39 T 12-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 JDM601_0662 f2cd0a8fbf58155cbab79f2e4e2e96e7 264 ProSitePatterns PS01014 Transcription termination factor nusG signature. 247 256 - T 12-10-2018 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site JDM601_0662 f2cd0a8fbf58155cbab79f2e4e2e96e7 264 Gene3D G3DSA:2.30.30.30 203 264 8.4E-25 T 12-10-2018 IPR014722 Ribosomal protein L2, domain 2 JDM601_0662 f2cd0a8fbf58155cbab79f2e4e2e96e7 264 PRINTS PR00338 Transcription termination factor NUSG signature 127 139 2.0E-19 T 12-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 JDM601_0662 f2cd0a8fbf58155cbab79f2e4e2e96e7 264 PRINTS PR00338 Transcription termination factor NUSG signature 222 237 2.0E-19 T 12-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 JDM601_0662 f2cd0a8fbf58155cbab79f2e4e2e96e7 264 PRINTS PR00338 Transcription termination factor NUSG signature 240 256 2.0E-19 T 12-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 JDM601_0662 f2cd0a8fbf58155cbab79f2e4e2e96e7 264 SUPERFAMILY SSF50104 208 264 9.63E-17 T 12-10-2018 IPR008991 Translation protein SH3-like domain superfamily JDM601_0662 f2cd0a8fbf58155cbab79f2e4e2e96e7 264 Pfam PF02357 Transcription termination factor nusG 74 176 7.8E-25 T 12-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 JDM601_0662 f2cd0a8fbf58155cbab79f2e4e2e96e7 264 SMART SM00738 72 180 1.1E-49 T 12-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 JDM601_0662 f2cd0a8fbf58155cbab79f2e4e2e96e7 264 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 75 264 7.1E-66 T 12-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 JDM601_0662 f2cd0a8fbf58155cbab79f2e4e2e96e7 264 SUPERFAMILY SSF82679 74 177 4.97E-36 T 12-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 JDM601_4140 cd938f489c6e5c3cfef4aec4944d3f92 966 SUPERFAMILY SSF82866 154 353 5.36E-25 T 12-10-2018 JDM601_4140 cd938f489c6e5c3cfef4aec4944d3f92 966 Gene3D G3DSA:1.20.1640.10 196 342 1.3E-5 T 12-10-2018 JDM601_4140 cd938f489c6e5c3cfef4aec4944d3f92 966 Pfam PF03176 MMPL family 610 936 5.7E-101 T 12-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 JDM601_4140 cd938f489c6e5c3cfef4aec4944d3f92 966 Pfam PF03176 MMPL family 55 384 1.3E-103 T 12-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 JDM601_4140 cd938f489c6e5c3cfef4aec4944d3f92 966 TIGRFAM TIGR00833 actII: transport protein 21 931 1.5E-294 T 12-10-2018 IPR004707 Membrane transport protein MmpL family GO:0016021 JDM601_4140 cd938f489c6e5c3cfef4aec4944d3f92 966 Gene3D G3DSA:3.30.70.1440 141 195 1.3E-5 T 12-10-2018 JDM601_4140 cd938f489c6e5c3cfef4aec4944d3f92 966 SUPERFAMILY SSF82866 722 931 1.31E-30 T 12-10-2018 JDM601_1054 912155d45ad94ac192b1fb820be37954 266 Gene3D G3DSA:3.40.50.1820 17 263 7.3E-16 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_1054 912155d45ad94ac192b1fb820be37954 266 Pfam PF01738 Dienelactone hydrolase family 29 146 9.2E-9 T 12-10-2018 IPR002925 Dienelactone hydrolase GO:0016787 JDM601_1054 912155d45ad94ac192b1fb820be37954 266 SUPERFAMILY SSF53474 17 233 6.9E-16 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_1161 792922746b0ec888261fa4d01c7d6398 859 Hamap MF_01611 FO synthase subunit 1 [cofG]. 76 408 50.689 T 12-10-2018 IPR019939 CofG family GO:0009108|GO:0016765|GO:0051539 KEGG: 00680+2.5.1.77 JDM601_1161 792922746b0ec888261fa4d01c7d6398 859 SUPERFAMILY SSF102114 501 810 1.09E-43 T 12-10-2018 JDM601_1161 792922746b0ec888261fa4d01c7d6398 859 TIGRFAM TIGR00423 TIGR00423: radical SAM domain protein, CofH subfamily 536 844 3.1E-111 T 12-10-2018 IPR020050 FO synthase, subunit 2 GO:0016765 KEGG: 00680+2.5.1.77 JDM601_1161 792922746b0ec888261fa4d01c7d6398 859 Hamap MF_01612 FO synthase subunit 2 [cofH]. 488 847 50.246 T 12-10-2018 IPR019940 CofH family GO:0016765 KEGG: 00680+2.5.1.77 JDM601_1161 792922746b0ec888261fa4d01c7d6398 859 Gene3D G3DSA:3.20.20.70 8 337 7.8E-51 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JDM601_1161 792922746b0ec888261fa4d01c7d6398 859 Gene3D G3DSA:3.20.20.70 485 839 2.7E-47 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JDM601_1161 792922746b0ec888261fa4d01c7d6398 859 Pfam PF04055 Radical SAM superfamily 544 705 2.4E-10 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 JDM601_1161 792922746b0ec888261fa4d01c7d6398 859 SUPERFAMILY SSF102114 33 383 1.05E-35 T 12-10-2018 JDM601_1161 792922746b0ec888261fa4d01c7d6398 859 TIGRFAM TIGR03551 F420_cofH: 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase, CofH subunit 502 845 2.8E-158 T 12-10-2018 IPR019940 CofH family GO:0016765 KEGG: 00680+2.5.1.77 JDM601_1161 792922746b0ec888261fa4d01c7d6398 859 SMART SM00729 80 317 3.9E-4 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 JDM601_1161 792922746b0ec888261fa4d01c7d6398 859 TIGRFAM TIGR03550 F420_cofG: 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase, CofG subunit 77 406 3.6E-144 T 12-10-2018 IPR019939 CofG family GO:0009108|GO:0016765|GO:0051539 KEGG: 00680+2.5.1.77 JDM601_1161 792922746b0ec888261fa4d01c7d6398 859 Pfam PF04055 Radical SAM superfamily 84 267 5.0E-10 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 JDM601_1943 44381c5f9fbec88bd4143fb14556e7e4 461 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 15 339 6.8E-58 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JDM601_1943 44381c5f9fbec88bd4143fb14556e7e4 461 Gene3D G3DSA:3.50.50.100 5 427 9.6E-109 T 12-10-2018 JDM601_1943 44381c5f9fbec88bd4143fb14556e7e4 461 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 172 197 7.6E-9 T 12-10-2018 JDM601_1943 44381c5f9fbec88bd4143fb14556e7e4 461 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 16 38 7.6E-9 T 12-10-2018 JDM601_1943 44381c5f9fbec88bd4143fb14556e7e4 461 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 317 324 7.6E-9 T 12-10-2018 JDM601_1943 44381c5f9fbec88bd4143fb14556e7e4 461 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 302 324 6.3E-12 T 12-10-2018 JDM601_1943 44381c5f9fbec88bd4143fb14556e7e4 461 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 112 130 6.3E-12 T 12-10-2018 JDM601_1943 44381c5f9fbec88bd4143fb14556e7e4 461 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 172 190 6.3E-12 T 12-10-2018 JDM601_1943 44381c5f9fbec88bd4143fb14556e7e4 461 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 17 36 6.3E-12 T 12-10-2018 JDM601_1943 44381c5f9fbec88bd4143fb14556e7e4 461 SUPERFAMILY SSF51905 12 351 6.29E-34 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_1104 8330b0e10d92509312f724129fca1b79 264 Pfam PF17198 Spirocyclase AveC-like 33 259 3.6E-86 T 12-10-2018 IPR033459 Spirocyclase AveC-like JDM601_3424 8bb04b506af44c5624bf2de32a01045d 485 Gene3D G3DSA:3.30.300.310 387 485 3.5E-32 T 12-10-2018 JDM601_3424 8bb04b506af44c5624bf2de32a01045d 485 SUPERFAMILY SSF56801 4 482 5.1E-141 T 12-10-2018 JDM601_3424 8bb04b506af44c5624bf2de32a01045d 485 Pfam PF13193 AMP-binding enzyme C-terminal domain 399 473 2.9E-21 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain JDM601_3424 8bb04b506af44c5624bf2de32a01045d 485 Pfam PF00501 AMP-binding enzyme 16 390 1.2E-94 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 JDM601_3424 8bb04b506af44c5624bf2de32a01045d 485 Gene3D G3DSA:3.40.50.12780 1 386 1.5E-104 T 12-10-2018 JDM601_3424 8bb04b506af44c5624bf2de32a01045d 485 ProSitePatterns PS00455 Putative AMP-binding domain signature. 151 162 - T 12-10-2018 IPR020845 AMP-binding, conserved site JDM601_2240 27a954225e5e75722fcb23f70e9ff219 187 Gene3D G3DSA:1.10.357.10 3 187 1.1E-57 T 12-10-2018 JDM601_2240 27a954225e5e75722fcb23f70e9ff219 187 SUPERFAMILY SSF46689 2 73 5.64E-17 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JDM601_2240 27a954225e5e75722fcb23f70e9ff219 187 ProSitePatterns PS01081 TetR-type HTH domain signature. 28 58 - T 12-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site JDM601_2240 27a954225e5e75722fcb23f70e9ff219 187 SUPERFAMILY SSF48498 78 181 1.7E-7 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily JDM601_2240 27a954225e5e75722fcb23f70e9ff219 187 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 62 6.4E-15 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_2240 27a954225e5e75722fcb23f70e9ff219 187 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 1.6E-7 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_2240 27a954225e5e75722fcb23f70e9ff219 187 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 1.6E-7 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_0966 a21c86a100c6d1eeac654ad13a3c91bd 380 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 26 287 2.0E-76 T 12-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 JDM601_0966 a21c86a100c6d1eeac654ad13a3c91bd 380 SMART SM00650 41 216 3.6E-66 T 12-10-2018 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 JDM601_0966 a21c86a100c6d1eeac654ad13a3c91bd 380 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 57 84 - T 12-10-2018 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 JDM601_0966 a21c86a100c6d1eeac654ad13a3c91bd 380 Pfam PF00398 Ribosomal RNA adenine dimethylase 28 286 1.2E-40 T 12-10-2018 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm JDM601_0966 a21c86a100c6d1eeac654ad13a3c91bd 380 Gene3D G3DSA:1.10.8.100 227 291 1.7E-16 T 12-10-2018 IPR023165 rRNA adenine dimethylase-like Reactome: R-HSA-2151201|Reactome: R-HSA-6793080 JDM601_0966 a21c86a100c6d1eeac654ad13a3c91bd 380 Gene3D G3DSA:3.40.50.150 3 218 3.0E-57 T 12-10-2018 JDM601_0966 a21c86a100c6d1eeac654ad13a3c91bd 380 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 25 290 47.913 T 12-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 JDM601_0966 a21c86a100c6d1eeac654ad13a3c91bd 380 SUPERFAMILY SSF53335 25 287 4.96E-60 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JDM601_0202 5c98b54e3339d137d199e5b12e146195 203 Gene3D G3DSA:1.20.120.80 26 203 2.9E-49 T 12-10-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 JDM601_0202 5c98b54e3339d137d199e5b12e146195 203 Pfam PF00510 Cytochrome c oxidase subunit III 31 201 1.1E-11 T 12-10-2018 IPR000298 Cytochrome c oxidase subunit III-like GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 JDM601_0202 5c98b54e3339d137d199e5b12e146195 203 SUPERFAMILY SSF81452 25 202 5.1E-43 T 12-10-2018 IPR035973 Cytochrome c oxidase subunit III-like superfamily GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 JDM601_4059 3a561f27d55726befdabe038027cbb33 412 Pfam PF00144 Beta-lactamase 45 398 1.4E-61 T 12-10-2018 IPR001466 Beta-lactamase-related JDM601_4059 3a561f27d55726befdabe038027cbb33 412 Gene3D G3DSA:3.40.710.30 30 409 1.2E-78 T 12-10-2018 JDM601_4059 3a561f27d55726befdabe038027cbb33 412 SUPERFAMILY SSF56601 33 392 1.56E-65 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like JDM601_2107 9526d0c7bc4f54747fee7350d98f1edc 128 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 6 83 3.1E-10 T 12-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 JDM601_2107 9526d0c7bc4f54747fee7350d98f1edc 128 Gene3D G3DSA:2.30.110.10 6 110 2.7E-17 T 12-10-2018 IPR012349 FMN-binding split barrel GO:0048037 JDM601_2107 9526d0c7bc4f54747fee7350d98f1edc 128 TIGRFAM TIGR03666 Rv2061_F420: PPOX class probable F420-dependent enzyme, Rv2061 family 2 127 5.0E-53 T 12-10-2018 IPR019965 PPOX class F420-dependent enzyme, family Rv2061, putative JDM601_2107 9526d0c7bc4f54747fee7350d98f1edc 128 SUPERFAMILY SSF50475 7 116 3.18E-18 T 12-10-2018 JDM601_3505 996660c952b41be86c88e879e50352e3 406 Gene3D G3DSA:3.20.20.140 56 364 2.1E-126 T 12-10-2018 JDM601_3505 996660c952b41be86c88e879e50352e3 406 SUPERFAMILY SSF51556 54 365 1.28E-91 T 12-10-2018 IPR032466 Metal-dependent hydrolase JDM601_3505 996660c952b41be86c88e879e50352e3 406 SUPERFAMILY SSF51338 15 66 7.64E-8 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 JDM601_3505 996660c952b41be86c88e879e50352e3 406 Gene3D G3DSA:2.30.40.10 11 402 2.1E-126 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 JDM601_3505 996660c952b41be86c88e879e50352e3 406 Pfam PF01979 Amidohydrolase family 50 401 2.0E-33 T 12-10-2018 IPR006680 Amidohydrolase-related GO:0016787 JDM601_3505 996660c952b41be86c88e879e50352e3 406 SUPERFAMILY SSF51338 344 404 1.84E-18 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 JDM601_2306 f7b6e712cfb3f9088e6610a93ed852d7 108 SUPERFAMILY SSF63562 33 105 1.73E-21 T 12-10-2018 IPR036161 RPB6/omega subunit-like superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 JDM601_2306 f7b6e712cfb3f9088e6610a93ed852d7 108 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 33 103 1.6E-25 T 12-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JDM601_2306 f7b6e712cfb3f9088e6610a93ed852d7 108 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 33 105 14.304 T 12-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JDM601_2306 f7b6e712cfb3f9088e6610a93ed852d7 108 Pfam PF01192 RNA polymerase Rpb6 40 102 3.2E-13 T 12-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 JDM601_2306 f7b6e712cfb3f9088e6610a93ed852d7 108 SMART SM01409 40 104 2.7E-12 T 12-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 JDM601_2306 f7b6e712cfb3f9088e6610a93ed852d7 108 Gene3D G3DSA:3.90.940.10 33 108 2.1E-17 T 12-10-2018 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 JDM601_3072 779a8b1c4acc99cbb409cb55478a00f0 605 SUPERFAMILY SSF52467 190 361 4.83E-38 T 12-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily JDM601_3072 779a8b1c4acc99cbb409cb55478a00f0 605 Gene3D G3DSA:3.40.50.970 354 589 1.6E-54 T 12-10-2018 JDM601_3072 779a8b1c4acc99cbb409cb55478a00f0 605 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 388 543 2.0E-27 T 12-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 JDM601_3072 779a8b1c4acc99cbb409cb55478a00f0 605 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 3 169 2.1E-39 T 12-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 JDM601_3072 779a8b1c4acc99cbb409cb55478a00f0 605 SUPERFAMILY SSF52518 364 559 2.11E-51 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold JDM601_3072 779a8b1c4acc99cbb409cb55478a00f0 605 Gene3D G3DSA:3.40.50.970 2 176 5.5E-48 T 12-10-2018 JDM601_3072 779a8b1c4acc99cbb409cb55478a00f0 605 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 198 328 8.1E-25 T 12-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 JDM601_3072 779a8b1c4acc99cbb409cb55478a00f0 605 SUPERFAMILY SSF52518 3 176 9.16E-42 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold JDM601_3072 779a8b1c4acc99cbb409cb55478a00f0 605 Gene3D G3DSA:3.40.50.1220 187 342 2.3E-39 T 12-10-2018 JDM601_3491 85649047d6d2633b529d783c8f316c4c 432 Gene3D G3DSA:3.40.50.11540 57 227 3.7E-53 T 12-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 JDM601_3491 85649047d6d2633b529d783c8f316c4c 432 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 52 215 8.8E-35 T 12-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 JDM601_3491 85649047d6d2633b529d783c8f316c4c 432 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 323 406 2.8E-15 T 12-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 JDM601_3491 85649047d6d2633b529d783c8f316c4c 432 SUPERFAMILY SSF142019 31 236 5.23E-50 T 12-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 JDM601_3491 85649047d6d2633b529d783c8f316c4c 432 SUPERFAMILY SSF142984 239 317 5.23E-12 T 12-10-2018 JDM601_3491 85649047d6d2633b529d783c8f316c4c 432 Gene3D G3DSA:3.10.20.600 228 318 9.0E-14 T 12-10-2018 JDM601_3491 85649047d6d2633b529d783c8f316c4c 432 SMART SM00928 321 366 6.5E-7 T 12-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 JDM601_3491 85649047d6d2633b529d783c8f316c4c 432 SUPERFAMILY SSF140490 317 414 1.83E-18 T 12-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 JDM601_3491 85649047d6d2633b529d783c8f316c4c 432 Gene3D G3DSA:1.20.1440.230 320 420 2.3E-11 T 12-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 JDM601_0927 e6c64ef4628c1d57b50cca64fd2e5b54 658 SUPERFAMILY SSF51230 580 650 6.15E-20 T 12-10-2018 IPR011053 Single hybrid motif JDM601_0927 e6c64ef4628c1d57b50cca64fd2e5b54 658 SUPERFAMILY SSF52440 1 110 9.35E-40 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily JDM601_0927 e6c64ef4628c1d57b50cca64fd2e5b54 658 SUPERFAMILY SSF51246 319 442 7.85E-32 T 12-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 JDM601_0927 e6c64ef4628c1d57b50cca64fd2e5b54 658 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 105 5.9E-39 T 12-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 JDM601_0927 e6c64ef4628c1d57b50cca64fd2e5b54 658 Gene3D G3DSA:3.30.470.130 1 446 4.7E-172 T 12-10-2018 JDM601_0927 e6c64ef4628c1d57b50cca64fd2e5b54 658 Pfam PF02785 Biotin carboxylase C-terminal domain 324 440 2.4E-29 T 12-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 JDM601_0927 e6c64ef4628c1d57b50cca64fd2e5b54 658 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 312 6.3E-60 T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 JDM601_0927 e6c64ef4628c1d57b50cca64fd2e5b54 658 Gene3D G3DSA:2.40.50.100 583 653 6.2E-22 T 12-10-2018 JDM601_0927 e6c64ef4628c1d57b50cca64fd2e5b54 658 Pfam PF00364 Biotin-requiring enzyme 586 648 3.5E-15 T 12-10-2018 IPR000089 Biotin/lipoyl attachment JDM601_0927 e6c64ef4628c1d57b50cca64fd2e5b54 658 SUPERFAMILY SSF56059 80 320 6.01E-56 T 12-10-2018 JDM601_0927 e6c64ef4628c1d57b50cca64fd2e5b54 658 SMART SM00878 324 440 5.2E-45 T 12-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 JDM601_0927 e6c64ef4628c1d57b50cca64fd2e5b54 658 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 606 623 - T 12-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 JDM601_0927 e6c64ef4628c1d57b50cca64fd2e5b54 658 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 276 283 - T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 JDM601_0077 beb0b2d091e225035d80d8837a88707a 70 SUPERFAMILY SSF50331 1 69 1.21E-18 T 12-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal JDM601_0077 beb0b2d091e225035d80d8837a88707a 70 TIGRFAM TIGR00638 Mop: molybdenum-pterin binding domain 1 69 1.7E-19 T 12-10-2018 IPR004606 Molybdenum-pterin binding GO:0015689 JDM601_0077 beb0b2d091e225035d80d8837a88707a 70 Pfam PF03459 TOBE domain 4 66 6.7E-16 T 12-10-2018 IPR005116 Transport-associated OB, type 1 JDM601_0077 beb0b2d091e225035d80d8837a88707a 70 Gene3D G3DSA:2.40.50.100 1 67 4.0E-21 T 12-10-2018 JDM601_1846 fe4bbe5ad0361c74b84023905662ba50 203 Gene3D G3DSA:3.10.300.10 2 197 1.1E-50 T 12-10-2018 IPR036995 Methylpurine-DNA glycosylase superfamily GO:0003677|GO:0003905|GO:0006284 Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 JDM601_1846 fe4bbe5ad0361c74b84023905662ba50 203 Pfam PF02245 Methylpurine-DNA glycosylase (MPG) 8 185 8.1E-55 T 12-10-2018 IPR003180 Methylpurine-DNA glycosylase GO:0003677|GO:0003905|GO:0006284 Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 JDM601_1846 fe4bbe5ad0361c74b84023905662ba50 203 SUPERFAMILY SSF50486 6 195 1.96E-54 T 12-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 JDM601_1846 fe4bbe5ad0361c74b84023905662ba50 203 TIGRFAM TIGR00567 3mg: DNA-3-methyladenine glycosylase 5 188 3.1E-60 T 12-10-2018 IPR003180 Methylpurine-DNA glycosylase GO:0003677|GO:0003905|GO:0006284 Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 JDM601_1846 fe4bbe5ad0361c74b84023905662ba50 203 Hamap MF_00527 Putative 3-methyladenine DNA glycosylase. 1 188 28.588 T 12-10-2018 IPR003180 Methylpurine-DNA glycosylase GO:0003677|GO:0003905|GO:0006284 Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 JDM601_4285 c91b6342e497939229d4f88a7da090ad 381 TIGRFAM TIGR00996 Mtu_fam_mce: virulence factor Mce family protein 1 276 2.1E-55 T 12-10-2018 IPR005693 Virulence factor Mce protein JDM601_4285 c91b6342e497939229d4f88a7da090ad 381 Pfam PF02470 MlaD protein 23 100 1.9E-10 T 12-10-2018 IPR003399 Mce/MlaD JDM601_4285 c91b6342e497939229d4f88a7da090ad 381 Pfam PF11887 Cholesterol uptake porter CUP1 of Mce4, putative 129 337 3.4E-47 T 12-10-2018 IPR024516 Mammalian cell entry, C-terminal JDM601_3231 68bdc529f404ddafb51b3570bc9b21f6 312 Pfam PF08237 PE-PPE domain 85 176 3.8E-10 T 12-10-2018 IPR013228 PE-PPE, C-terminal JDM601_0911 bcfa502353230d027e92e09209476862 457 Gene3D G3DSA:1.20.1260.20 1 174 9.2E-64 T 12-10-2018 IPR038332 PPE superfamily JDM601_0911 bcfa502353230d027e92e09209476862 457 Pfam PF00823 PPE family 5 161 4.4E-59 T 12-10-2018 IPR000030 PPE family JDM601_0911 bcfa502353230d027e92e09209476862 457 Pfam PF09851 Short C-terminal domain 429 454 1.6E-6 T 12-10-2018 IPR018649 SHOCT domain JDM601_0911 bcfa502353230d027e92e09209476862 457 Pfam PF12484 Polymorphic PE/PPE proteins C terminal 312 381 5.3E-7 T 12-10-2018 IPR022171 PPE family, C-terminal JDM601_0911 bcfa502353230d027e92e09209476862 457 SUPERFAMILY SSF140459 2 173 3.66E-60 T 12-10-2018 JDM601_2265 2f16393e0141d30258b30a9ffd531446 293 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 4 286 18.655 T 12-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 JDM601_2265 2f16393e0141d30258b30a9ffd531446 293 Pfam PF01040 UbiA prenyltransferase family 20 269 2.7E-59 T 12-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 JDM601_2265 2f16393e0141d30258b30a9ffd531446 293 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 7 285 6.1E-97 T 12-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 JDM601_2265 2f16393e0141d30258b30a9ffd531446 293 Gene3D G3DSA:1.10.357.140 16 170 7.1E-17 T 12-10-2018 JDM601_3154 42a58d83173aeeb14feee823e19b8cd9 474 ProSitePatterns PS00216 Sugar transport proteins signature 1. 309 325 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 JDM601_3154 42a58d83173aeeb14feee823e19b8cd9 474 PRINTS PR00171 Sugar transporter signature 264 274 3.8E-15 T 12-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 JDM601_3154 42a58d83173aeeb14feee823e19b8cd9 474 PRINTS PR00171 Sugar transporter signature 355 376 3.8E-15 T 12-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 JDM601_3154 42a58d83173aeeb14feee823e19b8cd9 474 PRINTS PR00171 Sugar transporter signature 25 35 3.8E-15 T 12-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 JDM601_3154 42a58d83173aeeb14feee823e19b8cd9 474 PRINTS PR00171 Sugar transporter signature 108 127 3.8E-15 T 12-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 JDM601_3154 42a58d83173aeeb14feee823e19b8cd9 474 PRINTS PR00171 Sugar transporter signature 378 390 3.8E-15 T 12-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 JDM601_3154 42a58d83173aeeb14feee823e19b8cd9 474 TIGRFAM TIGR00879 SP: MFS transporter, sugar porter (SP) family 7 450 3.2E-88 T 12-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 JDM601_3154 42a58d83173aeeb14feee823e19b8cd9 474 Pfam PF00083 Sugar (and other) transporter 19 454 1.9E-90 T 12-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 JDM601_3154 42a58d83173aeeb14feee823e19b8cd9 474 Gene3D G3DSA:1.20.1250.20 6 457 6.9E-106 T 12-10-2018 JDM601_3154 42a58d83173aeeb14feee823e19b8cd9 474 SUPERFAMILY SSF103473 8 451 1.83E-63 T 12-10-2018 IPR036259 MFS transporter superfamily JDM601_3154 42a58d83173aeeb14feee823e19b8cd9 474 ProSitePatterns PS00217 Sugar transport proteins signature 2. 113 138 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 JDM601_4341 c2f20a60db9d89a1fd8853d0b919c791 333 Gene3D G3DSA:1.10.10.2830 148 262 1.6E-34 T 12-10-2018 JDM601_4341 c2f20a60db9d89a1fd8853d0b919c791 333 SUPERFAMILY SSF109709 153 262 5.75E-31 T 12-10-2018 JDM601_4341 c2f20a60db9d89a1fd8853d0b919c791 333 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 63 247 1.1E-62 T 12-10-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 JDM601_4341 c2f20a60db9d89a1fd8853d0b919c791 333 Gene3D G3DSA:3.90.1530.30 79 147 2.7E-25 T 12-10-2018 JDM601_4341 c2f20a60db9d89a1fd8853d0b919c791 333 SUPERFAMILY SSF110849 61 164 4.97E-28 T 12-10-2018 IPR036086 ParB/Sulfiredoxin superfamily JDM601_4341 c2f20a60db9d89a1fd8853d0b919c791 333 SMART SM00470 66 161 7.8E-35 T 12-10-2018 IPR003115 ParB/Sulfiredoxin JDM601_4341 c2f20a60db9d89a1fd8853d0b919c791 333 Pfam PF02195 ParB-like nuclease domain 67 161 3.0E-24 T 12-10-2018 IPR003115 ParB/Sulfiredoxin JDM601_1996 e2b3883da3562043bb2d15b3970bb3e9 152 SUPERFAMILY SSF52091 36 133 7.46E-12 T 12-10-2018 IPR036513 STAS domain superfamily JDM601_1996 e2b3883da3562043bb2d15b3970bb3e9 152 Gene3D G3DSA:3.30.750.24 23 139 3.9E-15 T 12-10-2018 IPR036513 STAS domain superfamily JDM601_1996 e2b3883da3562043bb2d15b3970bb3e9 152 Pfam PF13466 STAS domain 39 111 8.7E-10 T 12-10-2018 IPR002645 STAS domain JDM601_3719 df52b4fb617fb0383271906cfc6f5208 321 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 7 104 5.7E-11 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 JDM601_3719 df52b4fb617fb0383271906cfc6f5208 321 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 183 320 4.0E-23 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 JDM601_3719 df52b4fb617fb0383271906cfc6f5208 321 Gene3D G3DSA:1.20.140.10 183 321 8.2E-30 T 12-10-2018 JDM601_3719 df52b4fb617fb0383271906cfc6f5208 321 Gene3D G3DSA:1.10.540.10 2 117 7.7E-21 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 JDM601_3719 df52b4fb617fb0383271906cfc6f5208 321 SUPERFAMILY SSF47203 183 320 6.6E-32 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 JDM601_3719 df52b4fb617fb0383271906cfc6f5208 321 SUPERFAMILY SSF56645 3 122 2.4E-17 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 JDM601_3021 5ea25623b6d98c352ab7b092ccdc05e0 734 ProSitePatterns PS01229 Hypothetical cof family signature 2. 614 636 - T 12-10-2018 JDM601_3021 5ea25623b6d98c352ab7b092ccdc05e0 734 Gene3D G3DSA:3.40.1110.10 423 545 5.3E-90 T 12-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 JDM601_3021 5ea25623b6d98c352ab7b092ccdc05e0 734 Pfam PF00122 E1-E2 ATPase 233 392 4.4E-41 T 12-10-2018 JDM601_3021 5ea25623b6d98c352ab7b092ccdc05e0 734 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 561 571 5.9E-27 T 12-10-2018 JDM601_3021 5ea25623b6d98c352ab7b092ccdc05e0 734 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 538 549 5.9E-27 T 12-10-2018 JDM601_3021 5ea25623b6d98c352ab7b092ccdc05e0 734 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 638 650 5.9E-27 T 12-10-2018 JDM601_3021 5ea25623b6d98c352ab7b092ccdc05e0 734 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 412 426 5.9E-27 T 12-10-2018 JDM601_3021 5ea25623b6d98c352ab7b092ccdc05e0 734 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 270 284 5.9E-27 T 12-10-2018 JDM601_3021 5ea25623b6d98c352ab7b092ccdc05e0 734 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 614 633 5.9E-27 T 12-10-2018 JDM601_3021 5ea25623b6d98c352ab7b092ccdc05e0 734 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 163 717 5.4E-171 T 12-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 JDM601_3021 5ea25623b6d98c352ab7b092ccdc05e0 734 SUPERFAMILY SSF81653 233 319 1.31E-20 T 12-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 JDM601_3021 5ea25623b6d98c352ab7b092ccdc05e0 734 SUPERFAMILY SSF56784 411 714 2.75E-55 T 12-10-2018 IPR036412 HAD-like superfamily JDM601_3021 5ea25623b6d98c352ab7b092ccdc05e0 734 Gene3D G3DSA:2.70.150.20 201 324 1.0E-28 T 12-10-2018 JDM601_3021 5ea25623b6d98c352ab7b092ccdc05e0 734 Gene3D G3DSA:3.40.50.1000 393 665 5.3E-90 T 12-10-2018 IPR023214 HAD superfamily JDM601_3021 5ea25623b6d98c352ab7b092ccdc05e0 734 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 414 420 - T 12-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 JDM601_3021 5ea25623b6d98c352ab7b092ccdc05e0 734 Pfam PF00702 haloacid dehalogenase-like hydrolase 408 628 1.4E-43 T 12-10-2018 JDM601_3021 5ea25623b6d98c352ab7b092ccdc05e0 734 SUPERFAMILY SSF81665 168 430 2.75E-5 T 12-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 JDM601_3021 5ea25623b6d98c352ab7b092ccdc05e0 734 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 234 695 3.4E-75 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 JDM601_3021 5ea25623b6d98c352ab7b092ccdc05e0 734 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 144 717 6.9E-126 T 12-10-2018 JDM601_1716 32e57e63d8e350f19baed7b878d5eb55 600 Gene3D G3DSA:3.40.50.12780 11 310 4.6E-49 T 12-10-2018 JDM601_1716 32e57e63d8e350f19baed7b878d5eb55 600 Pfam PF00501 AMP-binding enzyme 24 467 2.2E-96 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 JDM601_1716 32e57e63d8e350f19baed7b878d5eb55 600 ProSitePatterns PS00455 Putative AMP-binding domain signature. 186 197 - T 12-10-2018 IPR020845 AMP-binding, conserved site JDM601_1716 32e57e63d8e350f19baed7b878d5eb55 600 SUPERFAMILY SSF56801 15 598 1.1E-115 T 12-10-2018 JDM601_1716 32e57e63d8e350f19baed7b878d5eb55 600 Gene3D G3DSA:3.30.300.30 465 599 2.5E-5 T 12-10-2018 JDM601_1716 32e57e63d8e350f19baed7b878d5eb55 600 Gene3D G3DSA:3.40.50.12780 311 460 2.1E-36 T 12-10-2018 JDM601_2933 e2c241cc67bf210ec3e74159cf1e3285 495 SUPERFAMILY SSF55874 350 485 5.89E-18 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JDM601_2933 e2c241cc67bf210ec3e74159cf1e3285 495 Gene3D G3DSA:3.30.565.10 348 493 2.0E-23 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JDM601_2933 e2c241cc67bf210ec3e74159cf1e3285 495 SMART SM00387 387 488 1.9E-7 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JDM601_2933 e2c241cc67bf210ec3e74159cf1e3285 495 Gene3D G3DSA:3.30.450.280 1 129 2.5E-45 T 12-10-2018 IPR038424 Signal transduction histidine kinase, N-terminal domain superfamily JDM601_2933 e2c241cc67bf210ec3e74159cf1e3285 495 Pfam PF07568 Histidine kinase 293 361 3.9E-21 T 12-10-2018 IPR011495 Signal transduction histidine kinase, subgroup 2, dimerisation and phosphoacceptor domain JDM601_2933 e2c241cc67bf210ec3e74159cf1e3285 495 Pfam PF12282 Signal transduction histidine kinase 4 144 2.4E-46 T 12-10-2018 IPR022066 Signal transduction histidine kinase, N-terminal JDM601_2933 e2c241cc67bf210ec3e74159cf1e3285 495 Pfam PF08448 PAS fold 171 279 6.1E-6 T 12-10-2018 IPR013656 PAS fold-4 JDM601_2933 e2c241cc67bf210ec3e74159cf1e3285 495 Gene3D G3DSA:3.30.450.20 130 279 2.5E-41 T 12-10-2018 JDM601_2933 e2c241cc67bf210ec3e74159cf1e3285 495 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 390 486 1.3E-8 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JDM601_3365 2cd6c348d6388e70341f90d887ee9038 507 Gene3D G3DSA:3.40.605.10 23 497 2.0E-150 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 JDM601_3365 2cd6c348d6388e70341f90d887ee9038 507 SUPERFAMILY SSF53720 18 503 1.31E-139 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 JDM601_3365 2cd6c348d6388e70341f90d887ee9038 507 Gene3D G3DSA:3.40.309.10 275 469 2.0E-150 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 JDM601_3365 2cd6c348d6388e70341f90d887ee9038 507 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 270 277 - T 12-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 JDM601_3365 2cd6c348d6388e70341f90d887ee9038 507 Pfam PF00171 Aldehyde dehydrogenase family 33 499 7.3E-139 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 JDM601_2434 1748c81de03bd4dd817b50d22c6da988 233 PIRSF PIRSF010219 3 224 5.2E-80 T 12-10-2018 IPR016566 Uncharacterised conserved protein UCP010219 JDM601_2434 1748c81de03bd4dd817b50d22c6da988 233 Pfam PF11361 Protein of unknown function (DUF3159) 28 212 1.2E-66 T 12-10-2018 IPR016566 Uncharacterised conserved protein UCP010219 JDM601_2915 837d40c641d96aebe1bbd31dc2c0b36c 358 SUPERFAMILY SSF81324 40 171 9.29E-23 T 12-10-2018 JDM601_2915 837d40c641d96aebe1bbd31dc2c0b36c 358 SUPERFAMILY SSF51735 146 291 3.44E-25 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_2915 837d40c641d96aebe1bbd31dc2c0b36c 358 Pfam PF02254 TrkA-N domain 151 268 6.4E-25 T 12-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 JDM601_2915 837d40c641d96aebe1bbd31dc2c0b36c 358 Pfam PF07885 Ion channel 49 130 3.9E-14 T 12-10-2018 IPR013099 Potassium channel domain JDM601_2915 837d40c641d96aebe1bbd31dc2c0b36c 358 Gene3D G3DSA:3.40.50.720 143 284 2.1E-36 T 12-10-2018 JDM601_2915 837d40c641d96aebe1bbd31dc2c0b36c 358 Gene3D G3DSA:1.10.287.70 39 142 9.2E-17 T 12-10-2018 JDM601_1793 666799bd641a8a26a9ea17cd476cdd40 84 SUPERFAMILY SSF47598 5 67 1.11E-11 T 12-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 JDM601_0311 c82cb6ed34b55182f7b5b264c6020259 416 Pfam PF00823 PPE family 6 161 4.4E-63 T 12-10-2018 IPR000030 PPE family JDM601_0311 c82cb6ed34b55182f7b5b264c6020259 416 Gene3D G3DSA:1.20.1260.20 1 174 2.5E-67 T 12-10-2018 IPR038332 PPE superfamily JDM601_0311 c82cb6ed34b55182f7b5b264c6020259 416 Pfam PF12484 Polymorphic PE/PPE proteins C terminal 292 364 6.3E-9 T 12-10-2018 IPR022171 PPE family, C-terminal JDM601_0311 c82cb6ed34b55182f7b5b264c6020259 416 SUPERFAMILY SSF140459 2 174 1.54E-62 T 12-10-2018 JDM601_3741 28101290e577dc15606c3576a1165fc0 875 SUPERFAMILY SSF52009 765 868 3.66E-27 T 12-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 JDM601_3741 28101290e577dc15606c3576a1165fc0 875 Pfam PF00391 PEP-utilising enzyme, mobile domain 794 865 1.3E-21 T 12-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 JDM601_3741 28101290e577dc15606c3576a1165fc0 875 Pfam PF01370 NAD dependent epimerase/dehydratase family 5 208 1.1E-23 T 12-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 JDM601_3741 28101290e577dc15606c3576a1165fc0 875 Gene3D G3DSA:3.40.50.720 2 308 3.3E-53 T 12-10-2018 JDM601_3741 28101290e577dc15606c3576a1165fc0 875 SUPERFAMILY SSF51735 1 302 2.3E-51 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_3741 28101290e577dc15606c3576a1165fc0 875 Gene3D G3DSA:3.50.30.10 767 874 8.5E-32 T 12-10-2018 JDM601_3741 28101290e577dc15606c3576a1165fc0 875 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 142 3.5E-5 T 12-10-2018 JDM601_1001 18bb78ebcb8ee9adda40dc164feaff12 424 SUPERFAMILY SSF140459 3 175 8.11E-57 T 12-10-2018 JDM601_1001 18bb78ebcb8ee9adda40dc164feaff12 424 Gene3D G3DSA:1.20.1260.20 2 175 4.4E-61 T 12-10-2018 IPR038332 PPE superfamily JDM601_1001 18bb78ebcb8ee9adda40dc164feaff12 424 Pfam PF00823 PPE family 7 162 1.1E-55 T 12-10-2018 IPR000030 PPE family JDM601_1001 18bb78ebcb8ee9adda40dc164feaff12 424 Pfam PF12484 Polymorphic PE/PPE proteins C terminal 339 420 1.6E-17 T 12-10-2018 IPR022171 PPE family, C-terminal JDM601_1760 bc28f05257aaf42c50dc12dfb90604c4 346 PIRSF PIRSF000451 1 346 5.0E-108 T 12-10-2018 IPR011141 Polyketide synthase, type III GO:0009058|GO:0016747 JDM601_1760 bc28f05257aaf42c50dc12dfb90604c4 346 Pfam PF00195 Chalcone and stilbene synthases, N-terminal domain 66 195 1.9E-16 T 12-10-2018 IPR001099 Chalcone/stilbene synthase, N-terminal JDM601_1760 bc28f05257aaf42c50dc12dfb90604c4 346 Pfam PF02797 Chalcone and stilbene synthases, C-terminal domain 212 345 7.7E-17 T 12-10-2018 IPR012328 Chalcone/stilbene synthase, C-terminal JDM601_1760 bc28f05257aaf42c50dc12dfb90604c4 346 SUPERFAMILY SSF53901 9 346 1.28E-45 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 JDM601_1760 bc28f05257aaf42c50dc12dfb90604c4 346 Gene3D G3DSA:3.40.47.10 5 202 1.8E-60 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 JDM601_1760 bc28f05257aaf42c50dc12dfb90604c4 346 Gene3D G3DSA:3.40.47.10 203 346 1.5E-38 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 JDM601_0474 c0e4032fd713c208373c3d896763ef31 404 Gene3D G3DSA:3.30.420.40 82 213 2.5E-19 T 12-10-2018 JDM601_0474 c0e4032fd713c208373c3d896763ef31 404 Pfam PF00480 ROK family 84 347 2.5E-16 T 12-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 JDM601_0474 c0e4032fd713c208373c3d896763ef31 404 SUPERFAMILY SSF46785 13 77 4.58E-9 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JDM601_0474 c0e4032fd713c208373c3d896763ef31 404 Gene3D G3DSA:3.30.420.40 214 360 2.8E-17 T 12-10-2018 JDM601_0474 c0e4032fd713c208373c3d896763ef31 404 Gene3D G3DSA:1.10.10.10 8 77 2.3E-11 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JDM601_0474 c0e4032fd713c208373c3d896763ef31 404 SUPERFAMILY SSF53067 83 373 8.25E-27 T 12-10-2018 JDM601_3585 a90a3743efcbfb320becdef7db445a41 584 Gene3D G3DSA:3.40.50.720 151 299 9.5E-24 T 12-10-2018 JDM601_3585 a90a3743efcbfb320becdef7db445a41 584 SUPERFAMILY SSF51735 319 434 1.67E-8 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_3585 a90a3743efcbfb320becdef7db445a41 584 SUPERFAMILY SSF116726 506 546 1.96E-5 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 JDM601_3585 a90a3743efcbfb320becdef7db445a41 584 Gene3D G3DSA:1.10.287.70 38 142 6.5E-6 T 12-10-2018 JDM601_3585 a90a3743efcbfb320becdef7db445a41 584 Gene3D G3DSA:3.40.50.720 351 428 1.5E-7 T 12-10-2018 JDM601_3585 a90a3743efcbfb320becdef7db445a41 584 SUPERFAMILY SSF51735 155 299 8.66E-21 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_3585 a90a3743efcbfb320becdef7db445a41 584 Pfam PF02254 TrkA-N domain 156 268 1.6E-17 T 12-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 JDM601_3585 a90a3743efcbfb320becdef7db445a41 584 SUPERFAMILY SSF81324 36 176 9.42E-11 T 12-10-2018 JDM601_3080 4f66cfa97f5686b082b41e46a40d671d 329 Pfam PF00534 Glycosyl transferases group 1 220 302 1.8E-7 T 12-10-2018 IPR001296 Glycosyl transferase, family 1 JDM601_3080 4f66cfa97f5686b082b41e46a40d671d 329 Gene3D G3DSA:3.40.50.2000 182 323 1.6E-14 T 12-10-2018 JDM601_3080 4f66cfa97f5686b082b41e46a40d671d 329 SUPERFAMILY SSF53756 39 321 2.67E-17 T 12-10-2018 JDM601_0036 cdf514611e133a1ab311662d5b899a52 325 PIRSF PIRSF006232 17 303 1.2E-73 T 12-10-2018 IPR012093 Pirin Reactome: R-HSA-8935690 JDM601_0036 cdf514611e133a1ab311662d5b899a52 325 Gene3D G3DSA:2.60.120.10 30 265 1.4E-60 T 12-10-2018 IPR014710 RmlC-like jelly roll fold JDM601_0036 cdf514611e133a1ab311662d5b899a52 325 Pfam PF02678 Pirin 37 140 4.6E-30 T 12-10-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 JDM601_0036 cdf514611e133a1ab311662d5b899a52 325 SUPERFAMILY SSF51182 36 302 3.21E-64 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily JDM601_0036 cdf514611e133a1ab311662d5b899a52 325 Pfam PF05726 Pirin C-terminal cupin domain 192 290 1.4E-13 T 12-10-2018 IPR008778 Pirin, C-terminal domain Reactome: R-HSA-8935690 JDM601_1650 5e5a9f118991c3469db4d7d3052d6d1f 403 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 1 241 1.9E-48 T 12-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal JDM601_1650 5e5a9f118991c3469db4d7d3052d6d1f 403 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 249 360 6.8E-32 T 12-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal JDM601_1650 5e5a9f118991c3469db4d7d3052d6d1f 403 SMART SM00825 Beta-ketoacyl synthase 1 394 4.3E-11 T 12-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain JDM601_1650 5e5a9f118991c3469db4d7d3052d6d1f 403 SUPERFAMILY SSF53901 1 246 1.78E-57 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 JDM601_1650 5e5a9f118991c3469db4d7d3052d6d1f 403 Gene3D G3DSA:3.40.47.10 1 252 7.0E-68 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 JDM601_1650 5e5a9f118991c3469db4d7d3052d6d1f 403 Gene3D G3DSA:3.40.47.10 254 403 1.6E-52 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 JDM601_1650 5e5a9f118991c3469db4d7d3052d6d1f 403 SUPERFAMILY SSF53901 208 403 1.17E-62 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 JDM601_2472 14794f69f25fc2d7a76a903bd6134ac6 390 Pfam PF03993 Domain of Unknown Function (DUF349) 77 151 6.2E-12 T 12-10-2018 IPR007139 Protein of unknown function DUF349 JDM601_2472 14794f69f25fc2d7a76a903bd6134ac6 390 Pfam PF03993 Domain of Unknown Function (DUF349) 155 226 1.6E-17 T 12-10-2018 IPR007139 Protein of unknown function DUF349 JDM601_2472 14794f69f25fc2d7a76a903bd6134ac6 390 Pfam PF03993 Domain of Unknown Function (DUF349) 232 304 2.2E-19 T 12-10-2018 IPR007139 Protein of unknown function DUF349 JDM601_2437 76f3af97ac23f191633405f54ed86efb 228 SUPERFAMILY SSF53474 3 203 9.2E-17 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_2437 76f3af97ac23f191633405f54ed86efb 228 Gene3D G3DSA:3.40.50.1820 1 214 1.3E-14 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_4292 43257a7f4f76b273ab062557de64ff46 245 SUPERFAMILY SSF51445 44 189 3.16E-5 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily JDM601_4292 43257a7f4f76b273ab062557de64ff46 245 Gene3D G3DSA:3.20.20.80 21 242 2.1E-61 T 12-10-2018 JDM601_4292 43257a7f4f76b273ab062557de64ff46 245 Pfam PF08924 Domain of unknown function (DUF1906) 39 166 3.5E-25 T 12-10-2018 IPR015020 Protein of unknown function DUF1906 JDM601_4143 6c173aad0a87003241cc7e3090f78e9e 420 SUPERFAMILY SSF46589 2 111 5.13E-22 T 12-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 JDM601_4143 6c173aad0a87003241cc7e3090f78e9e 420 TIGRFAM TIGR00414 serS: serine--tRNA ligase 2 410 8.4E-124 T 12-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 JDM601_4143 6c173aad0a87003241cc7e3090f78e9e 420 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 415 38.191 T 12-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 JDM601_4143 6c173aad0a87003241cc7e3090f78e9e 420 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 218 393 5.1E-26 T 12-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 JDM601_4143 6c173aad0a87003241cc7e3090f78e9e 420 SUPERFAMILY SSF55681 119 417 3.32E-85 T 12-10-2018 JDM601_4143 6c173aad0a87003241cc7e3090f78e9e 420 Gene3D G3DSA:3.30.930.10 105 419 2.9E-113 T 12-10-2018 JDM601_4143 6c173aad0a87003241cc7e3090f78e9e 420 PRINTS PR00981 Seryl-tRNA synthetase signature 346 362 1.6E-30 T 12-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 JDM601_4143 6c173aad0a87003241cc7e3090f78e9e 420 PRINTS PR00981 Seryl-tRNA synthetase signature 271 284 1.6E-30 T 12-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 JDM601_4143 6c173aad0a87003241cc7e3090f78e9e 420 PRINTS PR00981 Seryl-tRNA synthetase signature 311 324 1.6E-30 T 12-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 JDM601_4143 6c173aad0a87003241cc7e3090f78e9e 420 PRINTS PR00981 Seryl-tRNA synthetase signature 259 271 1.6E-30 T 12-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 JDM601_4143 6c173aad0a87003241cc7e3090f78e9e 420 PRINTS PR00981 Seryl-tRNA synthetase signature 328 344 1.6E-30 T 12-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 JDM601_4143 6c173aad0a87003241cc7e3090f78e9e 420 PIRSF PIRSF001529 1 417 4.0E-130 T 12-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 JDM601_4143 6c173aad0a87003241cc7e3090f78e9e 420 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 106 1.8E-23 T 12-10-2018 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: R-HSA-2408557|Reactome: R-HSA-379716 JDM601_4143 6c173aad0a87003241cc7e3090f78e9e 420 Gene3D G3DSA:1.10.287.40 1 103 5.1E-19 T 12-10-2018 JDM601_0284 5c17a644b2915d1960f8c64e22024998 258 Gene3D G3DSA:3.30.70.2200 9 168 7.1E-14 T 12-10-2018 JDM601_3303 6d7ea3e601ffb4665d48500e915f7300 302 TIGRFAM TIGR00027 mthyl_TIGR00027: methyltransferase, TIGR00027 family 17 280 6.9E-86 T 12-10-2018 IPR011610 S-adenosyl-L-methionine-dependent methyltransferase, putative GO:0008168 JDM601_3303 6d7ea3e601ffb4665d48500e915f7300 302 Gene3D G3DSA:3.40.50.150 2 293 1.6E-91 T 12-10-2018 JDM601_3303 6d7ea3e601ffb4665d48500e915f7300 302 SUPERFAMILY SSF53335 15 286 5.82E-78 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JDM601_3303 6d7ea3e601ffb4665d48500e915f7300 302 Pfam PF04072 Leucine carboxyl methyltransferase 19 202 1.4E-67 T 12-10-2018 IPR007213 Methyltransferase Ppm1/Ppm2/Tcmp GO:0008168|GO:0032259 JDM601_2916 68d6e7f7d1ac2d61b5b703f14633d3c8 1143 Gene3D G3DSA:3.40.50.300 230 370 1.8E-27 T 12-10-2018 JDM601_2916 68d6e7f7d1ac2d61b5b703f14633d3c8 1143 Pfam PF13361 UvrD-like helicase C-terminal domain 657 807 6.5E-16 T 12-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 JDM601_2916 68d6e7f7d1ac2d61b5b703f14633d3c8 1143 Pfam PF13361 UvrD-like helicase C-terminal domain 350 506 1.1E-9 T 12-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 JDM601_2916 68d6e7f7d1ac2d61b5b703f14633d3c8 1143 Gene3D G3DSA:3.40.50.300 14 190 6.7E-31 T 12-10-2018 JDM601_2916 68d6e7f7d1ac2d61b5b703f14633d3c8 1143 Pfam PF12705 PD-(D/E)XK nuclease superfamily 953 1107 4.1E-14 T 12-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type JDM601_2916 68d6e7f7d1ac2d61b5b703f14633d3c8 1143 SUPERFAMILY SSF52980 966 1103 8.58E-8 T 12-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 JDM601_2916 68d6e7f7d1ac2d61b5b703f14633d3c8 1143 SUPERFAMILY SSF52540 17 830 1.33E-106 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_2916 68d6e7f7d1ac2d61b5b703f14633d3c8 1143 Pfam PF00580 UvrD/REP helicase N-terminal domain 20 337 1.5E-40 T 12-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 JDM601_2916 68d6e7f7d1ac2d61b5b703f14633d3c8 1143 Gene3D G3DSA:3.40.50.300 399 499 6.1E-16 T 12-10-2018 JDM601_0253 af4cba94f4c9f1d6165f65b7f485b48c 403 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 9 127 1.9E-14 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 JDM601_0253 af4cba94f4c9f1d6165f65b7f485b48c 403 SUPERFAMILY SSF56645 4 254 1.22E-60 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 JDM601_0253 af4cba94f4c9f1d6165f65b7f485b48c 403 Gene3D G3DSA:1.20.140.10 246 390 4.3E-36 T 12-10-2018 JDM601_0253 af4cba94f4c9f1d6165f65b7f485b48c 403 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 131 230 1.2E-20 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 JDM601_0253 af4cba94f4c9f1d6165f65b7f485b48c 403 Gene3D G3DSA:1.10.540.10 1 129 1.3E-29 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 JDM601_0253 af4cba94f4c9f1d6165f65b7f485b48c 403 SUPERFAMILY SSF47203 240 394 4.51E-42 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 JDM601_0253 af4cba94f4c9f1d6165f65b7f485b48c 403 Gene3D G3DSA:2.40.110.10 130 245 9.6E-34 T 12-10-2018 JDM601_0253 af4cba94f4c9f1d6165f65b7f485b48c 403 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 242 389 8.8E-34 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 JDM601_1236 d80950e6e81ed70ef90c01cd39691cac 626 SUPERFAMILY SSF90123 21 375 1.44E-77 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JDM601_1236 d80950e6e81ed70ef90c01cd39691cac 626 Gene3D G3DSA:3.40.50.300 388 625 5.2E-89 T 12-10-2018 JDM601_1236 d80950e6e81ed70ef90c01cd39691cac 626 Pfam PF00664 ABC transporter transmembrane region 52 345 4.8E-58 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 JDM601_1236 d80950e6e81ed70ef90c01cd39691cac 626 SUPERFAMILY SSF52540 386 623 9.71E-89 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_1236 d80950e6e81ed70ef90c01cd39691cac 626 SMART SM00382 416 602 7.5E-16 T 12-10-2018 IPR003593 AAA+ ATPase domain JDM601_1236 d80950e6e81ed70ef90c01cd39691cac 626 ProSitePatterns PS00211 ABC transporters family signature. 528 542 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JDM601_1236 d80950e6e81ed70ef90c01cd39691cac 626 Pfam PF00005 ABC transporter 408 556 1.0E-30 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JDM601_2487 a462e7e1ed862f475095d557f0e78b21 389 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 288 373 2.9E-7 T 12-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 JDM601_2487 a462e7e1ed862f475095d557f0e78b21 389 Gene3D G3DSA:3.40.50.2000 219 372 2.3E-22 T 12-10-2018 JDM601_2487 a462e7e1ed862f475095d557f0e78b21 389 SUPERFAMILY SSF53756 1 382 1.03E-60 T 12-10-2018 JDM601_2487 a462e7e1ed862f475095d557f0e78b21 389 Gene3D G3DSA:3.40.50.2000 1 218 5.5E-26 T 12-10-2018 JDM601_2232 a6cf3b34b2013ab3d4247c3eb1456e54 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 1.0E-43 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2232 a6cf3b34b2013ab3d4247c3eb1456e54 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 227 1.0E-43 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2232 a6cf3b34b2013ab3d4247c3eb1456e54 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 17 34 1.0E-43 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2232 a6cf3b34b2013ab3d4247c3eb1456e54 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 1.0E-43 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2232 a6cf3b34b2013ab3d4247c3eb1456e54 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 1.0E-43 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2232 a6cf3b34b2013ab3d4247c3eb1456e54 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 1.0E-43 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2232 a6cf3b34b2013ab3d4247c3eb1456e54 247 Gene3D G3DSA:3.40.50.720 3 247 2.9E-82 T 12-10-2018 JDM601_2232 a6cf3b34b2013ab3d4247c3eb1456e54 247 SUPERFAMILY SSF51735 16 245 8.7E-76 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_2232 a6cf3b34b2013ab3d4247c3eb1456e54 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 1.3E-10 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2232 a6cf3b34b2013ab3d4247c3eb1456e54 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 1.3E-10 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2232 a6cf3b34b2013ab3d4247c3eb1456e54 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 1.3E-10 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2232 a6cf3b34b2013ab3d4247c3eb1456e54 247 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 25 243 4.5E-56 T 12-10-2018 JDM601_2232 a6cf3b34b2013ab3d4247c3eb1456e54 247 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 16 189 3.5E-7 T 12-10-2018 JDM601_2232 a6cf3b34b2013ab3d4247c3eb1456e54 247 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 JDM601_0534 b3050cba6009310f282d28ef32063860 678 PRINTS PR01228 Eggshell protein signature 487 505 4.7E-5 T 12-10-2018 JDM601_0534 b3050cba6009310f282d28ef32063860 678 PRINTS PR01228 Eggshell protein signature 451 461 4.7E-5 T 12-10-2018 JDM601_0534 b3050cba6009310f282d28ef32063860 678 PRINTS PR01228 Eggshell protein signature 353 364 4.7E-5 T 12-10-2018 JDM601_0534 b3050cba6009310f282d28ef32063860 678 PRINTS PR01228 Eggshell protein signature 426 441 4.7E-5 T 12-10-2018 JDM601_3340 8de015a8925567d05b1fef25ef2d0c60 160 Gene3D G3DSA:3.10.129.10 15 160 3.1E-42 T 12-10-2018 JDM601_3340 8de015a8925567d05b1fef25ef2d0c60 160 Pfam PF14539 Domain of unknown function (DUF4442) 20 157 1.9E-52 T 12-10-2018 IPR027961 Protein of unknown function DUF4442 JDM601_3340 8de015a8925567d05b1fef25ef2d0c60 160 SUPERFAMILY SSF54637 20 157 3.57E-19 T 12-10-2018 IPR029069 HotDog domain superfamily JDM601_1829 1e328e8e10c171a8e8343f05186f85d1 485 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 178 203 2.6E-45 T 12-10-2018 JDM601_1829 1e328e8e10c171a8e8343f05186f85d1 485 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 40 55 2.6E-45 T 12-10-2018 JDM601_1829 1e328e8e10c171a8e8343f05186f85d1 485 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 142 151 2.6E-45 T 12-10-2018 JDM601_1829 1e328e8e10c171a8e8343f05186f85d1 485 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 264 278 2.6E-45 T 12-10-2018 JDM601_1829 1e328e8e10c171a8e8343f05186f85d1 485 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 308 315 2.6E-45 T 12-10-2018 JDM601_1829 1e328e8e10c171a8e8343f05186f85d1 485 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 2.6E-45 T 12-10-2018 JDM601_1829 1e328e8e10c171a8e8343f05186f85d1 485 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 424 439 2.6E-45 T 12-10-2018 JDM601_1829 1e328e8e10c171a8e8343f05186f85d1 485 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 357 378 2.6E-45 T 12-10-2018 JDM601_1829 1e328e8e10c171a8e8343f05186f85d1 485 SUPERFAMILY SSF55424 357 477 1.08E-24 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 JDM601_1829 1e328e8e10c171a8e8343f05186f85d1 485 PIRSF PIRSF000350 1 474 1.6E-62 T 12-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 JDM601_1829 1e328e8e10c171a8e8343f05186f85d1 485 SUPERFAMILY SSF51905 3 336 5.7E-40 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_1829 1e328e8e10c171a8e8343f05186f85d1 485 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 139 157 5.4E-17 T 12-10-2018 JDM601_1829 1e328e8e10c171a8e8343f05186f85d1 485 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 5.4E-17 T 12-10-2018 JDM601_1829 1e328e8e10c171a8e8343f05186f85d1 485 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 263 279 5.4E-17 T 12-10-2018 JDM601_1829 1e328e8e10c171a8e8343f05186f85d1 485 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 178 196 5.4E-17 T 12-10-2018 JDM601_1829 1e328e8e10c171a8e8343f05186f85d1 485 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 316 2.3E-44 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JDM601_1829 1e328e8e10c171a8e8343f05186f85d1 485 Gene3D G3DSA:3.50.50.60 7 334 8.5E-82 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_1829 1e328e8e10c171a8e8343f05186f85d1 485 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 361 468 1.0E-20 T 12-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 JDM601_1829 1e328e8e10c171a8e8343f05186f85d1 485 Gene3D G3DSA:3.50.50.60 158 277 8.5E-82 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_1829 1e328e8e10c171a8e8343f05186f85d1 485 Gene3D G3DSA:3.30.390.30 360 482 9.2E-25 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 JDM601_0658 06ccb23765495fadce8c50ff00c8aa12 158 PIRSF PIRSF018072 2 150 9.8E-48 T 12-10-2018 IPR016709 Uncharacterised protein family UPF0336 JDM601_0658 06ccb23765495fadce8c50ff00c8aa12 158 Hamap MF_00799 UPF0336 protein . 1 148 31.061 T 12-10-2018 IPR016709 Uncharacterised protein family UPF0336 JDM601_0658 06ccb23765495fadce8c50ff00c8aa12 158 Gene3D G3DSA:3.10.129.10 1 158 1.4E-40 T 12-10-2018 JDM601_0658 06ccb23765495fadce8c50ff00c8aa12 158 SUPERFAMILY SSF54637 8 153 5.48E-32 T 12-10-2018 IPR029069 HotDog domain superfamily JDM601_0658 06ccb23765495fadce8c50ff00c8aa12 158 Pfam PF13452 N-terminal half of MaoC dehydratase 8 137 3.6E-27 T 12-10-2018 IPR039569 N-terminal of MaoC-like dehydratase Reactome: R-HSA-193368|Reactome: R-HSA-2046106|Reactome: R-HSA-389887|Reactome: R-HSA-390247|Reactome: R-HSA-9033241|Reactome: R-HSA-9033500 JDM601_2678 9b102843641f3fe04312b472b7ab90ab 554 TIGRFAM TIGR03599 YloV: DAK2 domain fusion protein YloV 15 554 4.6E-149 T 12-10-2018 IPR019986 DAK2 domain-containing protein YloV JDM601_2678 9b102843641f3fe04312b472b7ab90ab 554 SMART SM01120 40 213 3.3E-43 T 12-10-2018 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 JDM601_2678 9b102843641f3fe04312b472b7ab90ab 554 Pfam PF02734 DAK2 domain 40 212 1.2E-30 T 12-10-2018 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 JDM601_2678 9b102843641f3fe04312b472b7ab90ab 554 SUPERFAMILY SSF101473 10 214 2.88E-30 T 12-10-2018 IPR036117 DhaL domain superfamily GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 JDM601_2678 9b102843641f3fe04312b472b7ab90ab 554 Pfam PF13684 Dihydroxyacetone kinase family 243 554 5.3E-69 T 12-10-2018 IPR033470 Uncharacterised protein, DhaK domain JDM601_2678 9b102843641f3fe04312b472b7ab90ab 554 SMART SM01121 242 554 1.3E-84 T 12-10-2018 IPR033470 Uncharacterised protein, DhaK domain JDM601_2678 9b102843641f3fe04312b472b7ab90ab 554 Gene3D G3DSA:1.25.40.340 8 214 8.3E-9 T 12-10-2018 IPR036117 DhaL domain superfamily GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 JDM601_3744 e4a3584b2fdd396871c6278cfd995603 386 Pfam PF04909 Amidohydrolase 73 379 4.4E-36 T 12-10-2018 IPR006680 Amidohydrolase-related GO:0016787 JDM601_3744 e4a3584b2fdd396871c6278cfd995603 386 Gene3D G3DSA:3.20.20.140 4 377 4.2E-96 T 12-10-2018 JDM601_3744 e4a3584b2fdd396871c6278cfd995603 386 SUPERFAMILY SSF51556 9 380 2.17E-74 T 12-10-2018 IPR032466 Metal-dependent hydrolase JDM601_1344 67bcf6870b4f7d896ec75d31186acd96 202 Pfam PF01725 Ham1 family 3 194 3.2E-52 T 12-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 JDM601_1344 67bcf6870b4f7d896ec75d31186acd96 202 Gene3D G3DSA:3.90.950.10 1 201 9.7E-68 T 12-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like JDM601_1344 67bcf6870b4f7d896ec75d31186acd96 202 Hamap MF_01405 dITP/XTP pyrophosphatase. 1 199 45.625 T 12-10-2018 IPR020922 dITP/XTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.66 JDM601_1344 67bcf6870b4f7d896ec75d31186acd96 202 SUPERFAMILY SSF52972 1 198 1.18E-60 T 12-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like JDM601_0075 d1a31a0a4803a7371e35840141de7c9d 349 Gene3D G3DSA:2.40.30.10 37 133 1.7E-20 T 12-10-2018 JDM601_0075 d1a31a0a4803a7371e35840141de7c9d 349 SUPERFAMILY SSF63380 32 138 5.61E-21 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel JDM601_0075 d1a31a0a4803a7371e35840141de7c9d 349 Pfam PF00175 Oxidoreductase NAD-binding domain 148 245 8.4E-12 T 12-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 JDM601_0075 d1a31a0a4803a7371e35840141de7c9d 349 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 274 318 1.9E-5 T 12-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 JDM601_0075 d1a31a0a4803a7371e35840141de7c9d 349 Pfam PF00970 Oxidoreductase FAD-binding domain 58 130 1.3E-8 T 12-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 JDM601_0075 d1a31a0a4803a7371e35840141de7c9d 349 PRINTS PR00410 Phenol hydroxylase reductase family signature 147 166 5.0E-11 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 JDM601_0075 d1a31a0a4803a7371e35840141de7c9d 349 PRINTS PR00410 Phenol hydroxylase reductase family signature 231 239 5.0E-11 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 JDM601_0075 d1a31a0a4803a7371e35840141de7c9d 349 PRINTS PR00410 Phenol hydroxylase reductase family signature 69 81 5.0E-11 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 JDM601_0075 d1a31a0a4803a7371e35840141de7c9d 349 Gene3D G3DSA:3.40.50.80 141 260 7.8E-23 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain JDM601_0075 d1a31a0a4803a7371e35840141de7c9d 349 SUPERFAMILY SSF52343 134 261 1.02E-27 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain JDM601_0075 d1a31a0a4803a7371e35840141de7c9d 349 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 69 79 7.2E-6 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 JDM601_0075 d1a31a0a4803a7371e35840141de7c9d 349 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 88 95 7.2E-6 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 JDM601_0075 d1a31a0a4803a7371e35840141de7c9d 349 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 147 166 7.2E-6 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 JDM601_0075 d1a31a0a4803a7371e35840141de7c9d 349 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 184 195 7.2E-6 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 JDM601_0075 d1a31a0a4803a7371e35840141de7c9d 349 SUPERFAMILY SSF54292 253 349 6.69E-17 T 12-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 JDM601_0075 d1a31a0a4803a7371e35840141de7c9d 349 Gene3D G3DSA:3.10.20.30 261 349 3.3E-14 T 12-10-2018 IPR012675 Beta-grasp domain superfamily JDM601_4158 9eccc945ca43f7de0af918b0bd8b7198 206 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 4 84 5.5E-30 T 12-10-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 JDM601_4158 9eccc945ca43f7de0af918b0bd8b7198 206 PRINTS PR01703 Manganese superoxide dismutase signature 158 170 5.1E-20 T 12-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 JDM601_4158 9eccc945ca43f7de0af918b0bd8b7198 206 PRINTS PR01703 Manganese superoxide dismutase signature 67 80 5.1E-20 T 12-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 JDM601_4158 9eccc945ca43f7de0af918b0bd8b7198 206 PRINTS PR01703 Manganese superoxide dismutase signature 28 41 5.1E-20 T 12-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 JDM601_4158 9eccc945ca43f7de0af918b0bd8b7198 206 PRINTS PR01703 Manganese superoxide dismutase signature 7 18 5.1E-20 T 12-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 JDM601_4158 9eccc945ca43f7de0af918b0bd8b7198 206 PRINTS PR01703 Manganese superoxide dismutase signature 120 128 5.1E-20 T 12-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 JDM601_4158 9eccc945ca43f7de0af918b0bd8b7198 206 Gene3D G3DSA:1.10.287.990 21 84 1.4E-24 T 12-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 JDM601_4158 9eccc945ca43f7de0af918b0bd8b7198 206 Gene3D G3DSA:2.40.500.20 85 206 2.3E-47 T 12-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 JDM601_4158 9eccc945ca43f7de0af918b0bd8b7198 206 SUPERFAMILY SSF46609 3 88 7.07E-29 T 12-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 JDM601_4158 9eccc945ca43f7de0af918b0bd8b7198 206 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 160 167 - T 12-10-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 JDM601_4158 9eccc945ca43f7de0af918b0bd8b7198 206 SUPERFAMILY SSF54719 84 198 7.86E-44 T 12-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 JDM601_4158 9eccc945ca43f7de0af918b0bd8b7198 206 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 91 193 1.8E-34 T 12-10-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 JDM601_4158 9eccc945ca43f7de0af918b0bd8b7198 206 PIRSF PIRSF000349 1 202 6.3E-75 T 12-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 JDM601_2880 ad1ac8716173c203ecab93c03ad21b49 332 Pfam PF00296 Luciferase-like monooxygenase 11 307 6.8E-51 T 12-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 JDM601_2880 ad1ac8716173c203ecab93c03ad21b49 332 SUPERFAMILY SSF51679 10 315 9.42E-52 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 JDM601_2880 ad1ac8716173c203ecab93c03ad21b49 332 Gene3D G3DSA:3.20.20.30 4 329 1.9E-61 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 JDM601_2880 ad1ac8716173c203ecab93c03ad21b49 332 TIGRFAM TIGR03617 F420_MSMEG_2256: probable F420-dependent oxidoreductase, MSMEG_2256 family 17 331 2.3E-135 T 12-10-2018 IPR019919 Luciferase-like, F420-dependent oxidoreductase, MSMEG2256, predicted JDM601_2341 0f323bdf7673f9e5a5adc4d0fee7a614 901 Gene3D G3DSA:2.40.30.130 474 567 1.6E-10 T 12-10-2018 JDM601_2341 0f323bdf7673f9e5a5adc4d0fee7a614 901 Gene3D G3DSA:3.30.930.10 1 244 2.3E-90 T 12-10-2018 JDM601_2341 0f323bdf7673f9e5a5adc4d0fee7a614 901 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 899 167.271 T 12-10-2018 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 JDM601_2341 0f323bdf7673f9e5a5adc4d0fee7a614 901 Pfam PF01411 tRNA synthetases class II (A) 5 569 1.4E-201 T 12-10-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 JDM601_2341 0f323bdf7673f9e5a5adc4d0fee7a614 901 PRINTS PR00980 Alanyl-tRNA synthetase signature 281 297 1.0E-26 T 12-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 JDM601_2341 0f323bdf7673f9e5a5adc4d0fee7a614 901 PRINTS PR00980 Alanyl-tRNA synthetase signature 196 207 1.0E-26 T 12-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 JDM601_2341 0f323bdf7673f9e5a5adc4d0fee7a614 901 PRINTS PR00980 Alanyl-tRNA synthetase signature 69 80 1.0E-26 T 12-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 JDM601_2341 0f323bdf7673f9e5a5adc4d0fee7a614 901 PRINTS PR00980 Alanyl-tRNA synthetase signature 305 318 1.0E-26 T 12-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 JDM601_2341 0f323bdf7673f9e5a5adc4d0fee7a614 901 PRINTS PR00980 Alanyl-tRNA synthetase signature 229 242 1.0E-26 T 12-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 JDM601_2341 0f323bdf7673f9e5a5adc4d0fee7a614 901 SUPERFAMILY SSF55681 2 248 2.73E-86 T 12-10-2018 JDM601_2341 0f323bdf7673f9e5a5adc4d0fee7a614 901 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 5 878 1.2E-240 T 12-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 JDM601_2341 0f323bdf7673f9e5a5adc4d0fee7a614 901 Gene3D G3DSA:3.30.980.10 579 713 1.6E-40 T 12-10-2018 JDM601_2341 0f323bdf7673f9e5a5adc4d0fee7a614 901 SUPERFAMILY SSF50447 462 567 1.34E-15 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily JDM601_2341 0f323bdf7673f9e5a5adc4d0fee7a614 901 Gene3D G3DSA:3.30.54.20 639 693 1.6E-40 T 12-10-2018 JDM601_2341 0f323bdf7673f9e5a5adc4d0fee7a614 901 SMART SM00863 668 712 1.0E-18 T 12-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 JDM601_2341 0f323bdf7673f9e5a5adc4d0fee7a614 901 Pfam PF02272 DHHA1 domain 749 895 1.1E-15 T 12-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 JDM601_2341 0f323bdf7673f9e5a5adc4d0fee7a614 901 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 668 712 7.0E-15 T 12-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 JDM601_2341 0f323bdf7673f9e5a5adc4d0fee7a614 901 SUPERFAMILY SSF101353 249 444 9.55E-55 T 12-10-2018 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7 JDM601_2341 0f323bdf7673f9e5a5adc4d0fee7a614 901 SUPERFAMILY SSF55186 572 718 5.76E-42 T 12-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 JDM601_2341 0f323bdf7673f9e5a5adc4d0fee7a614 901 Gene3D G3DSA:3.10.310.40 780 896 5.3E-16 T 12-10-2018 JDM601_1817 a6a80af0c67337f42f16f9d30bebaa28 390 Pfam PF06224 Winged helix DNA-binding domain 34 371 7.0E-57 T 12-10-2018 IPR009351 Protein of unknown function DUF1006 JDM601_0247 dc4294d72dd89964f589c8b983e89f82 649 Pfam PF00916 Sulfate permease family 24 409 7.5E-48 T 12-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 JDM601_2292 28ad0635498be3ecbd78cba15f5fa846 309 SUPERFAMILY SSF53328 2 206 1.23E-55 T 12-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 JDM601_2292 28ad0635498be3ecbd78cba15f5fa846 309 Pfam PF00551 Formyl transferase 2 178 5.7E-28 T 12-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 JDM601_2292 28ad0635498be3ecbd78cba15f5fa846 309 Gene3D G3DSA:3.10.25.10 208 307 3.6E-21 T 12-10-2018 IPR037022 Formyl transferase, C-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 JDM601_2292 28ad0635498be3ecbd78cba15f5fa846 309 Gene3D G3DSA:3.40.50.170 1 206 6.9E-62 T 12-10-2018 JDM601_2292 28ad0635498be3ecbd78cba15f5fa846 309 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 2 303 6.6E-63 T 12-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 JDM601_2292 28ad0635498be3ecbd78cba15f5fa846 309 Pfam PF02911 Formyl transferase, C-terminal domain 204 301 1.7E-20 T 12-10-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 JDM601_2292 28ad0635498be3ecbd78cba15f5fa846 309 SUPERFAMILY SSF50486 205 304 1.11E-24 T 12-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 JDM601_2292 28ad0635498be3ecbd78cba15f5fa846 309 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 1 304 30.714 T 12-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 JDM601_4230 8410dbfd5a1c0ff2fc1b46202506e068 288 Pfam PF12697 Alpha/beta hydrolase family 28 278 2.0E-20 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 JDM601_4230 8410dbfd5a1c0ff2fc1b46202506e068 288 SUPERFAMILY SSF53474 9 286 3.06E-51 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_4230 8410dbfd5a1c0ff2fc1b46202506e068 288 Gene3D G3DSA:3.40.50.1820 5 287 6.1E-55 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_4230 8410dbfd5a1c0ff2fc1b46202506e068 288 PRINTS PR00412 Epoxide hydrolase signature 111 124 1.5E-5 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 JDM601_4230 8410dbfd5a1c0ff2fc1b46202506e068 288 PRINTS PR00412 Epoxide hydrolase signature 228 244 1.5E-5 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 JDM601_4230 8410dbfd5a1c0ff2fc1b46202506e068 288 PRINTS PR00412 Epoxide hydrolase signature 261 283 1.5E-5 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 JDM601_4230 8410dbfd5a1c0ff2fc1b46202506e068 288 PRINTS PR00412 Epoxide hydrolase signature 53 68 1.5E-5 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 JDM601_4230 8410dbfd5a1c0ff2fc1b46202506e068 288 PRINTS PR00111 Alpha/beta hydrolase fold signature 53 68 2.1E-5 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 JDM601_4230 8410dbfd5a1c0ff2fc1b46202506e068 288 PRINTS PR00111 Alpha/beta hydrolase fold signature 111 124 2.1E-5 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 JDM601_4230 8410dbfd5a1c0ff2fc1b46202506e068 288 PRINTS PR00111 Alpha/beta hydrolase fold signature 97 110 2.1E-5 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 JDM601_1749 87f0a67359e50ce9bb5420583b7640f0 96 Pfam PF02325 YGGT family 10 86 1.0E-11 T 12-10-2018 IPR003425 CCB3/YggT GO:0016020 JDM601_1402 e58a367608fb853173c7403348f55641 213 Gene3D G3DSA:3.40.1080.10 1 212 1.9E-104 T 12-10-2018 JDM601_1402 e58a367608fb853173c7403348f55641 213 SMART SM00882 6 202 2.2E-79 T 12-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 JDM601_1402 e58a367608fb853173c7403348f55641 213 TIGRFAM TIGR02428 pcaJ_scoB_fam: 3-oxoacid CoA-transferase, B subunit 4 208 4.7E-101 T 12-10-2018 IPR012791 3-oxoacid CoA-transferase, subunit B GO:0008410 Reactome: R-HSA-77108 JDM601_1402 e58a367608fb853173c7403348f55641 213 ProSitePatterns PS01274 Coenzyme A transferases signature 2. 44 52 - T 12-10-2018 IPR004164 Coenzyme A transferase active site GO:0008410 Reactome: R-HSA-77108 JDM601_1402 e58a367608fb853173c7403348f55641 213 Pfam PF01144 Coenzyme A transferase 7 201 4.7E-47 T 12-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 JDM601_1402 e58a367608fb853173c7403348f55641 213 SUPERFAMILY SSF100950 4 210 4.61E-74 T 12-10-2018 IPR037171 NagB/RpiA transferase-like JDM601_3248 316802d54b773bdb5ab21698bdc7bd52 646 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 311 329 1.7E-6 T 12-10-2018 JDM601_3248 316802d54b773bdb5ab21698bdc7bd52 646 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 143 162 1.7E-6 T 12-10-2018 JDM601_3248 316802d54b773bdb5ab21698bdc7bd52 646 SUPERFAMILY SSF51905 448 635 2.41E-16 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_3248 316802d54b773bdb5ab21698bdc7bd52 646 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 142 164 4.6E-9 T 12-10-2018 JDM601_3248 316802d54b773bdb5ab21698bdc7bd52 646 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 585 605 4.6E-9 T 12-10-2018 JDM601_3248 316802d54b773bdb5ab21698bdc7bd52 646 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 311 336 4.6E-9 T 12-10-2018 JDM601_3248 316802d54b773bdb5ab21698bdc7bd52 646 Gene3D G3DSA:3.50.50.60 469 640 7.6E-36 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_3248 316802d54b773bdb5ab21698bdc7bd52 646 SUPERFAMILY SSF51905 143 394 6.26E-53 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_3248 316802d54b773bdb5ab21698bdc7bd52 646 Gene3D G3DSA:3.50.50.60 135 367 3.1E-65 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_3248 316802d54b773bdb5ab21698bdc7bd52 646 Pfam PF00743 Flavin-binding monooxygenase-like 143 346 3.0E-15 T 12-10-2018 IPR020946 Flavin monooxygenase-like GO:0004499|GO:0050660|GO:0050661|GO:0055114 JDM601_4330 ed4b510d3ebf118d37ce8d2af0289bd9 176 SUPERFAMILY SSF103647 9 69 2.88E-6 T 12-10-2018 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 JDM601_4330 ed4b510d3ebf118d37ce8d2af0289bd9 176 SUPERFAMILY SSF103647 107 172 4.05E-8 T 12-10-2018 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 JDM601_2100 2afd532be12f59e9c80e00be885ecb96 111 Gene3D G3DSA:2.20.28.270 1 79 2.4E-37 T 12-10-2018 IPR038638 RbpA superfamily JDM601_2100 2afd532be12f59e9c80e00be885ecb96 111 Hamap MF_01483 RNA polymerase-binding protein RbpA [rbpA]. 16 111 22.077 T 12-10-2018 IPR025182 RNA polymerase-binding protein RbpA GO:0001000|GO:0045893 JDM601_2100 2afd532be12f59e9c80e00be885ecb96 111 Pfam PF13397 RNA polymerase-binding protein 4 105 1.6E-39 T 12-10-2018 IPR025182 RNA polymerase-binding protein RbpA GO:0001000|GO:0045893 JDM601_3438 1f53d85038cbb4ddb18ee4fe8b778336 412 PRINTS PR00385 P450 superfamily signature 352 361 5.7E-8 T 12-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_3438 1f53d85038cbb4ddb18ee4fe8b778336 412 PRINTS PR00385 P450 superfamily signature 361 372 5.7E-8 T 12-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_3438 1f53d85038cbb4ddb18ee4fe8b778336 412 PRINTS PR00385 P450 superfamily signature 285 296 5.7E-8 T 12-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_3438 1f53d85038cbb4ddb18ee4fe8b778336 412 PRINTS PR00385 P450 superfamily signature 245 262 5.7E-8 T 12-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_3438 1f53d85038cbb4ddb18ee4fe8b778336 412 Gene3D G3DSA:1.10.630.10 15 412 1.1E-105 T 12-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_3438 1f53d85038cbb4ddb18ee4fe8b778336 412 PRINTS PR00359 B-class P450 signature 163 178 9.2E-53 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3438 1f53d85038cbb4ddb18ee4fe8b778336 412 PRINTS PR00359 B-class P450 signature 361 372 9.2E-53 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3438 1f53d85038cbb4ddb18ee4fe8b778336 412 PRINTS PR00359 B-class P450 signature 200 222 9.2E-53 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3438 1f53d85038cbb4ddb18ee4fe8b778336 412 PRINTS PR00359 B-class P450 signature 285 296 9.2E-53 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3438 1f53d85038cbb4ddb18ee4fe8b778336 412 PRINTS PR00359 B-class P450 signature 303 330 9.2E-53 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3438 1f53d85038cbb4ddb18ee4fe8b778336 412 PRINTS PR00359 B-class P450 signature 331 346 9.2E-53 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3438 1f53d85038cbb4ddb18ee4fe8b778336 412 PRINTS PR00359 B-class P450 signature 352 361 9.2E-53 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3438 1f53d85038cbb4ddb18ee4fe8b778336 412 PRINTS PR00359 B-class P450 signature 99 110 9.2E-53 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3438 1f53d85038cbb4ddb18ee4fe8b778336 412 PRINTS PR00359 B-class P450 signature 146 162 9.2E-53 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3438 1f53d85038cbb4ddb18ee4fe8b778336 412 Pfam PF00067 Cytochrome P450 221 381 2.7E-22 T 12-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_3438 1f53d85038cbb4ddb18ee4fe8b778336 412 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 354 363 - T 12-10-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 JDM601_3438 1f53d85038cbb4ddb18ee4fe8b778336 412 SUPERFAMILY SSF48264 23 412 3.8E-82 T 12-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_2765 87e3c0e94565ed0dad563dc4f21e8b8c 340 PIRSF PIRSF000709 47 149 0.0014 T 12-10-2018 JDM601_2765 87e3c0e94565ed0dad563dc4f21e8b8c 340 SUPERFAMILY SSF53254 51 265 1.08E-25 T 12-10-2018 IPR029033 Histidine phosphatase superfamily JDM601_2765 87e3c0e94565ed0dad563dc4f21e8b8c 340 SMART SM00855 51 218 7.5E-11 T 12-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 JDM601_2765 87e3c0e94565ed0dad563dc4f21e8b8c 340 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 54 219 7.9E-19 T 12-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 JDM601_2765 87e3c0e94565ed0dad563dc4f21e8b8c 340 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 54 63 - T 12-10-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824 JDM601_2765 87e3c0e94565ed0dad563dc4f21e8b8c 340 Gene3D G3DSA:3.40.50.1240 43 251 3.8E-23 T 12-10-2018 IPR029033 Histidine phosphatase superfamily JDM601_1640 132a112007f82b511e70724a26268600 177 Pfam PF11343 Protein of unknown function (DUF3145) 21 174 1.5E-71 T 12-10-2018 IPR021491 Protein of unknown function DUF3145 JDM601_0953 f6fe6115b3f26b7ac60a16bb1d68bb30 450 Gene3D G3DSA:1.10.285.10 391 450 2.0E-6 T 12-10-2018 JDM601_0953 f6fe6115b3f26b7ac60a16bb1d68bb30 450 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 123 136 - T 12-10-2018 IPR033524 Leu/Phe/Val dehydrogenases active site Reactome: R-HSA-2151201|Reactome: R-HSA-70614 JDM601_0953 f6fe6115b3f26b7ac60a16bb1d68bb30 450 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 58 186 2.1E-48 T 12-10-2018 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 JDM601_0953 f6fe6115b3f26b7ac60a16bb1d68bb30 450 SMART SM00839 206 448 5.5E-83 T 12-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 JDM601_0953 f6fe6115b3f26b7ac60a16bb1d68bb30 450 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 204 448 1.1E-85 T 12-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 JDM601_0953 f6fe6115b3f26b7ac60a16bb1d68bb30 450 Gene3D G3DSA:1.10.285.10 9 386 4.7E-165 T 12-10-2018 JDM601_0953 f6fe6115b3f26b7ac60a16bb1d68bb30 450 PIRSF PIRSF000185 23 450 5.6E-115 T 12-10-2018 IPR014362 Glutamate dehydrogenase GO:0016639|GO:0055114 JDM601_0953 f6fe6115b3f26b7ac60a16bb1d68bb30 450 Gene3D G3DSA:3.40.50.720 211 375 4.7E-165 T 12-10-2018 JDM601_0953 f6fe6115b3f26b7ac60a16bb1d68bb30 450 Gene3D G3DSA:3.40.50.10860 56 191 4.7E-165 T 12-10-2018 JDM601_0953 f6fe6115b3f26b7ac60a16bb1d68bb30 450 SUPERFAMILY SSF51735 204 449 4.6E-72 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_0953 f6fe6115b3f26b7ac60a16bb1d68bb30 450 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 374 385 1.6E-30 T 12-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 JDM601_0953 f6fe6115b3f26b7ac60a16bb1d68bb30 450 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 115 129 1.6E-30 T 12-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 JDM601_0953 f6fe6115b3f26b7ac60a16bb1d68bb30 450 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 195 217 1.6E-30 T 12-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 JDM601_0953 f6fe6115b3f26b7ac60a16bb1d68bb30 450 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 237 257 1.6E-30 T 12-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 JDM601_0953 f6fe6115b3f26b7ac60a16bb1d68bb30 450 SUPERFAMILY SSF53223 9 198 6.72E-74 T 12-10-2018 JDM601_0543 2ef5acdac4124661a0c27239fecb9a42 487 TIGRFAM TIGR02946 acyl_WS_DGAT: acyltransferase, WS/DGAT/MGAT 4 483 2.2E-110 T 12-10-2018 IPR014292 Acyltransferase, WS/DGAT/MGAT GO:0016746|GO:0045017 KEGG: 00073+2.3.1.20|KEGG: 00561+2.3.1.20 JDM601_0543 2ef5acdac4124661a0c27239fecb9a42 487 Pfam PF06974 Protein of unknown function (DUF1298) 330 479 3.2E-22 T 12-10-2018 IPR009721 O-acyltransferase WSD1, C-terminal GO:0004144 KEGG: 00073+2.3.1.20|KEGG: 00561+2.3.1.20 JDM601_0543 2ef5acdac4124661a0c27239fecb9a42 487 SUPERFAMILY SSF52777 41 182 4.22E-10 T 12-10-2018 JDM601_0543 2ef5acdac4124661a0c27239fecb9a42 487 Pfam PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain 4 282 9.4E-52 T 12-10-2018 IPR004255 O-acyltransferase, WSD1, N-terminal GO:0004144|GO:0045017 KEGG: 00073+2.3.1.20|KEGG: 00561+2.3.1.20 JDM601_1418 955d45ef3402aed1fa976e7c520b9fcf 364 Pfam PF00676 Dehydrogenase E1 component 46 315 2.6E-82 T 12-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 JDM601_1418 955d45ef3402aed1fa976e7c520b9fcf 364 TIGRFAM TIGR03181 PDH_E1_alph_x: pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit 16 355 3.5E-133 T 12-10-2018 IPR017596 Pyruvate dehydrogenase E1 component subunit alpha/BCKADH E1-alpha KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 JDM601_1418 955d45ef3402aed1fa976e7c520b9fcf 364 Gene3D G3DSA:3.40.50.970 8 356 1.1E-118 T 12-10-2018 JDM601_1418 955d45ef3402aed1fa976e7c520b9fcf 364 SUPERFAMILY SSF52518 35 358 8.58E-102 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold JDM601_3960 628090ae110dd0ce230bb9af92f2f830 95 Hamap MF_01479 Transcriptional regulator WhiB [whiB]. 7 76 16.716 T 12-10-2018 IPR003482 Transcription factor WhiB JDM601_3960 628090ae110dd0ce230bb9af92f2f830 95 Pfam PF02467 Transcription factor WhiB 9 71 1.3E-22 T 12-10-2018 IPR034768 WhiB-like iron-sulfur binding domain JDM601_3409 ce2af36f5ff5ebd5ed10755391548239 406 Pfam PF02803 Thiolase, C-terminal domain 279 403 5.0E-41 T 12-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 JDM601_3409 ce2af36f5ff5ebd5ed10755391548239 406 Pfam PF00108 Thiolase, N-terminal domain 7 270 6.9E-64 T 12-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 JDM601_3409 ce2af36f5ff5ebd5ed10755391548239 406 Gene3D G3DSA:3.40.47.10 8 284 7.6E-150 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 JDM601_3409 ce2af36f5ff5ebd5ed10755391548239 406 PIRSF PIRSF000429 2 405 1.2E-126 T 12-10-2018 IPR002155 Thiolase GO:0016747 JDM601_3409 ce2af36f5ff5ebd5ed10755391548239 406 SUPERFAMILY SSF53901 6 278 7.8E-78 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 JDM601_3409 ce2af36f5ff5ebd5ed10755391548239 406 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 8 402 7.8E-129 T 12-10-2018 IPR002155 Thiolase GO:0016747 JDM601_3409 ce2af36f5ff5ebd5ed10755391548239 406 SUPERFAMILY SSF53901 279 403 3.49E-40 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 JDM601_3409 ce2af36f5ff5ebd5ed10755391548239 406 Gene3D G3DSA:3.40.47.10 142 402 7.6E-150 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 JDM601_0225 710ab56c6f9863437ea269097daf1b92 458 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 351 379 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 JDM601_0225 710ab56c6f9863437ea269097daf1b92 458 Gene3D G3DSA:3.40.50.720 33 211 6.6E-58 T 12-10-2018 JDM601_0225 710ab56c6f9863437ea269097daf1b92 458 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 344 352 4.7E-11 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0225 710ab56c6f9863437ea269097daf1b92 458 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 364 383 4.7E-11 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0225 710ab56c6f9863437ea269097daf1b92 458 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 291 302 4.7E-11 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0225 710ab56c6f9863437ea269097daf1b92 458 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 224 452 8.7E-49 T 12-10-2018 JDM601_0225 710ab56c6f9863437ea269097daf1b92 458 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 218 395 8.8E-6 T 12-10-2018 JDM601_0225 710ab56c6f9863437ea269097daf1b92 458 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 338 354 1.2E-35 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0225 710ab56c6f9863437ea269097daf1b92 458 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 291 302 1.2E-35 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0225 710ab56c6f9863437ea269097daf1b92 458 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 418 438 1.2E-35 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0225 710ab56c6f9863437ea269097daf1b92 458 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 364 383 1.2E-35 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0225 710ab56c6f9863437ea269097daf1b92 458 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 219 236 1.2E-35 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0225 710ab56c6f9863437ea269097daf1b92 458 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 385 402 1.2E-35 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0225 710ab56c6f9863437ea269097daf1b92 458 SUPERFAMILY SSF51735 214 455 2.49E-60 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_0225 710ab56c6f9863437ea269097daf1b92 458 Gene3D G3DSA:3.40.50.720 213 457 5.0E-71 T 12-10-2018 JDM601_2738 9423ef13ac2a79b2bb8c94f01fb1751a 131 Pfam PF04237 YjbR 22 118 5.6E-12 T 12-10-2018 IPR007351 Uncharacterised protein YjbR JDM601_2738 9423ef13ac2a79b2bb8c94f01fb1751a 131 SUPERFAMILY SSF142906 15 123 6.28E-9 T 12-10-2018 IPR038056 YjbR-like superfamily JDM601_0290 bdb184daf35abe90819c605ecaafa545 610 Gene3D G3DSA:3.40.50.300 298 492 3.8E-54 T 12-10-2018 JDM601_0290 bdb184daf35abe90819c605ecaafa545 610 Gene3D G3DSA:1.10.8.60 493 598 9.7E-12 T 12-10-2018 JDM601_0290 bdb184daf35abe90819c605ecaafa545 610 PRINTS PR00819 CbxX/CfqX superfamily signature 397 411 1.7E-53 T 12-10-2018 IPR000641 CbxX/CfqX GO:0005524 JDM601_0290 bdb184daf35abe90819c605ecaafa545 610 PRINTS PR00819 CbxX/CfqX superfamily signature 442 454 1.7E-53 T 12-10-2018 IPR000641 CbxX/CfqX GO:0005524 JDM601_0290 bdb184daf35abe90819c605ecaafa545 610 PRINTS PR00819 CbxX/CfqX superfamily signature 319 333 1.7E-53 T 12-10-2018 IPR000641 CbxX/CfqX GO:0005524 JDM601_0290 bdb184daf35abe90819c605ecaafa545 610 PRINTS PR00819 CbxX/CfqX superfamily signature 463 480 1.7E-53 T 12-10-2018 IPR000641 CbxX/CfqX GO:0005524 JDM601_0290 bdb184daf35abe90819c605ecaafa545 610 PRINTS PR00819 CbxX/CfqX superfamily signature 359 374 1.7E-53 T 12-10-2018 IPR000641 CbxX/CfqX GO:0005524 JDM601_0290 bdb184daf35abe90819c605ecaafa545 610 PRINTS PR00819 CbxX/CfqX superfamily signature 480 499 1.7E-53 T 12-10-2018 IPR000641 CbxX/CfqX GO:0005524 JDM601_0290 bdb184daf35abe90819c605ecaafa545 610 PRINTS PR00819 CbxX/CfqX superfamily signature 550 562 1.7E-53 T 12-10-2018 IPR000641 CbxX/CfqX GO:0005524 JDM601_0290 bdb184daf35abe90819c605ecaafa545 610 PRINTS PR00819 CbxX/CfqX superfamily signature 411 430 1.7E-53 T 12-10-2018 IPR000641 CbxX/CfqX GO:0005524 JDM601_0290 bdb184daf35abe90819c605ecaafa545 610 TIGRFAM TIGR03922 T7SS_EccA: type VII secretion AAA-ATPase EccA 50 602 1.6E-248 T 12-10-2018 IPR023835 Type VII secretion system AAA-ATPase, EccA JDM601_0290 bdb184daf35abe90819c605ecaafa545 610 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 361 492 6.2E-19 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 JDM601_0290 bdb184daf35abe90819c605ecaafa545 610 SMART SM00382 356 495 2.8E-5 T 12-10-2018 IPR003593 AAA+ ATPase domain JDM601_0290 bdb184daf35abe90819c605ecaafa545 610 SUPERFAMILY SSF52540 317 530 7.41E-34 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_0290 bdb184daf35abe90819c605ecaafa545 610 Gene3D G3DSA:1.25.40.10 31 297 3.1E-57 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JDM601_3759 1282bf06c5f9032f6a89af2b707a0ac6 383 SUPERFAMILY SSF47203 239 380 4.95E-12 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 JDM601_3759 1282bf06c5f9032f6a89af2b707a0ac6 383 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 133 227 2.9E-21 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 JDM601_3759 1282bf06c5f9032f6a89af2b707a0ac6 383 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 8 121 7.8E-11 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 JDM601_3759 1282bf06c5f9032f6a89af2b707a0ac6 383 Gene3D G3DSA:1.10.540.10 4 128 8.0E-18 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 JDM601_3759 1282bf06c5f9032f6a89af2b707a0ac6 383 Gene3D G3DSA:1.20.140.10 244 383 1.0E-17 T 12-10-2018 JDM601_3759 1282bf06c5f9032f6a89af2b707a0ac6 383 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 239 378 1.8E-10 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 JDM601_3759 1282bf06c5f9032f6a89af2b707a0ac6 383 SUPERFAMILY SSF56645 40 250 9.69E-58 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 JDM601_3759 1282bf06c5f9032f6a89af2b707a0ac6 383 Gene3D G3DSA:2.40.110.10 133 243 1.2E-34 T 12-10-2018 JDM601_3540 f96d1e1facaaaee2724da557954da5cd 305 Pfam PF00583 Acetyltransferase (GNAT) family 45 109 2.6E-7 T 12-10-2018 IPR000182 GNAT domain JDM601_3540 f96d1e1facaaaee2724da557954da5cd 305 Pfam PF00583 Acetyltransferase (GNAT) family 178 290 6.7E-11 T 12-10-2018 IPR000182 GNAT domain JDM601_3540 f96d1e1facaaaee2724da557954da5cd 305 PIRSF PIRSF021524 4 304 6.4E-96 T 12-10-2018 IPR017813 Mycothiol acetyltransferase GO:0016747 JDM601_3540 f96d1e1facaaaee2724da557954da5cd 305 Hamap MF_01698 Mycothiol acetyltransferase [mshD]. 9 301 34.671 T 12-10-2018 IPR017813 Mycothiol acetyltransferase GO:0016747 JDM601_3540 f96d1e1facaaaee2724da557954da5cd 305 Gene3D G3DSA:3.40.630.30 1 303 3.2E-97 T 12-10-2018 JDM601_3540 f96d1e1facaaaee2724da557954da5cd 305 SUPERFAMILY SSF55729 10 298 2.55E-41 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase JDM601_3540 f96d1e1facaaaee2724da557954da5cd 305 TIGRFAM TIGR03448 mycothiol_MshD: mycothiol synthase 6 299 5.0E-118 T 12-10-2018 IPR017813 Mycothiol acetyltransferase GO:0016747 JDM601_0086 7f254a1c76247ba9a6408b00c9168853 179 SUPERFAMILY SSF54593 5 152 6.85E-32 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase JDM601_0086 7f254a1c76247ba9a6408b00c9168853 179 Gene3D G3DSA:3.10.180.10 5 166 2.8E-35 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase JDM601_0086 7f254a1c76247ba9a6408b00c9168853 179 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 9 139 2.3E-14 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain JDM601_3594 6bbc6f6346a70bfe8f1f0944524a883a 425 SMART SM01209 104 295 2.0E-97 T 12-10-2018 JDM601_3594 6bbc6f6346a70bfe8f1f0944524a883a 425 Gene3D G3DSA:3.90.600.10 330 416 8.4E-26 T 12-10-2018 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 JDM601_3594 6bbc6f6346a70bfe8f1f0944524a883a 425 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 331 416 1.6E-25 T 12-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 JDM601_3594 6bbc6f6346a70bfe8f1f0944524a883a 425 Gene3D G3DSA:3.30.470.20 191 329 1.7E-48 T 12-10-2018 JDM601_3594 6bbc6f6346a70bfe8f1f0944524a883a 425 SUPERFAMILY SSF51246 329 418 3.85E-24 T 12-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 JDM601_3594 6bbc6f6346a70bfe8f1f0944524a883a 425 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 4 419 2.9E-145 T 12-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 JDM601_3594 6bbc6f6346a70bfe8f1f0944524a883a 425 SMART SM01210 330 419 7.5E-37 T 12-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 JDM601_3594 6bbc6f6346a70bfe8f1f0944524a883a 425 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 104 295 8.9E-63 T 12-10-2018 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 JDM601_3594 6bbc6f6346a70bfe8f1f0944524a883a 425 Gene3D G3DSA:3.40.50.20 5 96 3.0E-30 T 12-10-2018 JDM601_3594 6bbc6f6346a70bfe8f1f0944524a883a 425 SUPERFAMILY SSF52440 3 104 1.87E-30 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily JDM601_3594 6bbc6f6346a70bfe8f1f0944524a883a 425 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 4 419 39.038 T 12-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 JDM601_3594 6bbc6f6346a70bfe8f1f0944524a883a 425 Gene3D G3DSA:3.30.1490.20 123 190 9.7E-10 T 12-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 JDM601_3594 6bbc6f6346a70bfe8f1f0944524a883a 425 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 289 296 - T 12-10-2018 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 JDM601_3594 6bbc6f6346a70bfe8f1f0944524a883a 425 SUPERFAMILY SSF56059 105 318 4.65E-47 T 12-10-2018 JDM601_3594 6bbc6f6346a70bfe8f1f0944524a883a 425 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 4 103 3.5E-30 T 12-10-2018 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 JDM601_1485 49fd4047bcef13578e75065993568f37 883 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 852 864 3.7E-10 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JDM601_1485 49fd4047bcef13578e75065993568f37 883 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 822 836 3.7E-10 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JDM601_1485 49fd4047bcef13578e75065993568f37 883 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 836 852 3.7E-10 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JDM601_1485 49fd4047bcef13578e75065993568f37 883 Gene3D G3DSA:1.25.40.10 558 736 2.5E-7 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JDM601_1485 49fd4047bcef13578e75065993568f37 883 SMART SM00382 32 328 4.1E-7 T 12-10-2018 IPR003593 AAA+ ATPase domain JDM601_1485 49fd4047bcef13578e75065993568f37 883 ProSitePatterns PS00622 LuxR-type HTH domain signature. 836 863 - T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JDM601_1485 49fd4047bcef13578e75065993568f37 883 Pfam PF00196 Bacterial regulatory proteins, luxR family 822 875 3.8E-13 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JDM601_1485 49fd4047bcef13578e75065993568f37 883 Pfam PF13401 AAA domain 36 142 1.0E-6 T 12-10-2018 IPR003593 AAA+ ATPase domain JDM601_1485 49fd4047bcef13578e75065993568f37 883 SMART SM00421 819 876 3.5E-18 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JDM601_1485 49fd4047bcef13578e75065993568f37 883 SUPERFAMILY SSF52540 12 215 9.5E-16 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_1485 49fd4047bcef13578e75065993568f37 883 SUPERFAMILY SSF46894 815 876 1.9E-16 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 JDM601_1485 49fd4047bcef13578e75065993568f37 883 Gene3D G3DSA:3.40.50.300 1 159 3.9E-8 T 12-10-2018 JDM601_1485 49fd4047bcef13578e75065993568f37 883 Gene3D G3DSA:1.10.10.10 797 877 2.0E-18 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JDM601_1556 097426d560d7836ab06aa92d259d5d1e 432 SUPERFAMILY SSF56176 339 426 1.06E-10 T 12-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 JDM601_1556 097426d560d7836ab06aa92d259d5d1e 432 SMART SM01091 339 422 3.9E-17 T 12-10-2018 IPR005170 Transporter-associated domain JDM601_1556 097426d560d7836ab06aa92d259d5d1e 432 Gene3D G3DSA:3.10.580.10 180 329 1.3E-53 T 12-10-2018 JDM601_1556 097426d560d7836ab06aa92d259d5d1e 432 Pfam PF00571 CBS domain 202 255 0.0016 T 12-10-2018 IPR000644 CBS domain JDM601_1556 097426d560d7836ab06aa92d259d5d1e 432 Pfam PF00571 CBS domain 269 323 3.1E-5 T 12-10-2018 IPR000644 CBS domain JDM601_1556 097426d560d7836ab06aa92d259d5d1e 432 Pfam PF01595 Domain of unknown function DUF21 10 185 3.6E-30 T 12-10-2018 IPR002550 CNNM, transmembrane domain JDM601_1556 097426d560d7836ab06aa92d259d5d1e 432 Gene3D G3DSA:3.30.465.10 330 419 8.8E-16 T 12-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 JDM601_1556 097426d560d7836ab06aa92d259d5d1e 432 Pfam PF03471 Transporter associated domain 341 416 2.9E-10 T 12-10-2018 IPR005170 Transporter-associated domain JDM601_1556 097426d560d7836ab06aa92d259d5d1e 432 SUPERFAMILY SSF54631 196 332 6.7E-32 T 12-10-2018 JDM601_2686 ca34689a17d9cb27029b7e04ad95215f 224 Hamap MF_02114 2-phospho-L-lactate guanylyltransferase [cofC]. 10 214 22.552 T 12-10-2018 IPR002835 2-phospho-L-lactate guanylyltransferase, CofC GO:0016779 KEGG: 00680+2.7.7.68|MetaCyc: PWY-5198 JDM601_2686 ca34689a17d9cb27029b7e04ad95215f 224 TIGRFAM TIGR03552 F420_cofC: 2-phospho-L-lactate guanylyltransferase 12 207 2.9E-58 T 12-10-2018 IPR002835 2-phospho-L-lactate guanylyltransferase, CofC GO:0016779 KEGG: 00680+2.7.7.68|MetaCyc: PWY-5198 JDM601_2686 ca34689a17d9cb27029b7e04ad95215f 224 Gene3D G3DSA:3.90.550.10 9 180 1.2E-36 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases JDM601_2686 ca34689a17d9cb27029b7e04ad95215f 224 SUPERFAMILY SSF53448 13 210 4.5E-33 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases JDM601_2686 ca34689a17d9cb27029b7e04ad95215f 224 Pfam PF01983 Guanylyl transferase CofC like 12 170 1.5E-8 T 12-10-2018 IPR002835 2-phospho-L-lactate guanylyltransferase, CofC GO:0016779 KEGG: 00680+2.7.7.68|MetaCyc: PWY-5198 JDM601_3961 4dfe286e1fada094111352219dab1b10 800 SUPERFAMILY SSF53955 50 274 7.59E-59 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily JDM601_3961 4dfe286e1fada094111352219dab1b10 800 Gene3D G3DSA:3.30.10.20 690 754 1.3E-22 T 12-10-2018 JDM601_3961 4dfe286e1fada094111352219dab1b10 800 Pfam PF00905 Penicillin binding protein transpeptidase domain 355 609 5.2E-20 T 12-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 JDM601_3961 4dfe286e1fada094111352219dab1b10 800 Gene3D G3DSA:1.10.3810.10 53 260 6.8E-60 T 12-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 JDM601_3961 4dfe286e1fada094111352219dab1b10 800 Gene3D G3DSA:3.40.710.10 283 685 6.1E-63 T 12-10-2018 JDM601_3961 4dfe286e1fada094111352219dab1b10 800 SUPERFAMILY SSF56601 228 721 1.01E-69 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like JDM601_3961 4dfe286e1fada094111352219dab1b10 800 Pfam PF00912 Transglycosylase 60 246 2.6E-53 T 12-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 JDM601_3961 4dfe286e1fada094111352219dab1b10 800 Pfam PF03793 PASTA domain 692 751 2.2E-9 T 12-10-2018 IPR005543 PASTA domain JDM601_3961 4dfe286e1fada094111352219dab1b10 800 SMART SM00740 687 752 9.0E-10 T 12-10-2018 IPR005543 PASTA domain JDM601_0816 2e5325408de479df97f0a9750bb0e1b7 431 ProSitePatterns PS00480 Citrate synthase signature. 306 318 - T 12-10-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 JDM601_0816 2e5325408de479df97f0a9750bb0e1b7 431 Gene3D G3DSA:1.10.230.10 270 379 1.0E-142 T 12-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain JDM601_0816 2e5325408de479df97f0a9750bb0e1b7 431 Pfam PF00285 Citrate synthase, C-terminal domain 48 414 2.2E-134 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 JDM601_0816 2e5325408de479df97f0a9750bb0e1b7 431 SUPERFAMILY SSF48256 5 430 7.33E-158 T 12-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 JDM601_0816 2e5325408de479df97f0a9750bb0e1b7 431 Gene3D G3DSA:2.20.28.60 1 52 4.0E-21 T 12-10-2018 JDM601_0816 2e5325408de479df97f0a9750bb0e1b7 431 Gene3D G3DSA:1.10.580.10 59 414 1.0E-142 T 12-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 JDM601_0816 2e5325408de479df97f0a9750bb0e1b7 431 PIRSF PIRSF001369 39 431 5.2E-157 T 12-10-2018 IPR024176 Citrate synthase, bacterial-type JDM601_0816 2e5325408de479df97f0a9750bb0e1b7 431 TIGRFAM TIGR01798 cit_synth_I: citrate (Si)-synthase 16 425 2.0E-181 T 12-10-2018 IPR010953 Citrate synthase, type I GO:0004108|GO:0005737 JDM601_0816 2e5325408de479df97f0a9750bb0e1b7 431 PRINTS PR00143 Citrate synthase signature 382 396 1.1E-52 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 JDM601_0816 2e5325408de479df97f0a9750bb0e1b7 431 PRINTS PR00143 Citrate synthase signature 243 271 1.1E-52 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 JDM601_0816 2e5325408de479df97f0a9750bb0e1b7 431 PRINTS PR00143 Citrate synthase signature 221 236 1.1E-52 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 JDM601_0816 2e5325408de479df97f0a9750bb0e1b7 431 PRINTS PR00143 Citrate synthase signature 299 319 1.1E-52 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 JDM601_0816 2e5325408de479df97f0a9750bb0e1b7 431 PRINTS PR00143 Citrate synthase signature 167 180 1.1E-52 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 JDM601_0816 2e5325408de479df97f0a9750bb0e1b7 431 PRINTS PR00143 Citrate synthase signature 362 378 1.1E-52 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 JDM601_0005 346ee120b7bb8d36db8b1fc47ef4b28a 671 PRINTS PR00418 DNA topoisomerase II family signature 36 51 2.4E-69 T 12-10-2018 JDM601_0005 346ee120b7bb8d36db8b1fc47ef4b28a 671 PRINTS PR00418 DNA topoisomerase II family signature 113 127 2.4E-69 T 12-10-2018 JDM601_0005 346ee120b7bb8d36db8b1fc47ef4b28a 671 PRINTS PR00418 DNA topoisomerase II family signature 554 566 2.4E-69 T 12-10-2018 JDM601_0005 346ee120b7bb8d36db8b1fc47ef4b28a 671 PRINTS PR00418 DNA topoisomerase II family signature 450 464 2.4E-69 T 12-10-2018 JDM601_0005 346ee120b7bb8d36db8b1fc47ef4b28a 671 PRINTS PR00418 DNA topoisomerase II family signature 603 619 2.4E-69 T 12-10-2018 JDM601_0005 346ee120b7bb8d36db8b1fc47ef4b28a 671 PRINTS PR00418 DNA topoisomerase II family signature 534 551 2.4E-69 T 12-10-2018 JDM601_0005 346ee120b7bb8d36db8b1fc47ef4b28a 671 PRINTS PR00418 DNA topoisomerase II family signature 298 311 2.4E-69 T 12-10-2018 JDM601_0005 346ee120b7bb8d36db8b1fc47ef4b28a 671 PRINTS PR00418 DNA topoisomerase II family signature 71 84 2.4E-69 T 12-10-2018 JDM601_0005 346ee120b7bb8d36db8b1fc47ef4b28a 671 PRINTS PR00418 DNA topoisomerase II family signature 516 532 2.4E-69 T 12-10-2018 JDM601_0005 346ee120b7bb8d36db8b1fc47ef4b28a 671 Gene3D G3DSA:3.30.565.10 3 216 2.4E-80 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JDM601_0005 346ee120b7bb8d36db8b1fc47ef4b28a 671 SUPERFAMILY SSF54211 251 420 3.79E-60 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold JDM601_0005 346ee120b7bb8d36db8b1fc47ef4b28a 671 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 4 671 94.042 T 12-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 JDM601_0005 346ee120b7bb8d36db8b1fc47ef4b28a 671 SUPERFAMILY SSF55874 6 212 6.94E-66 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JDM601_0005 346ee120b7bb8d36db8b1fc47ef4b28a 671 Gene3D G3DSA:3.30.230.10 250 422 4.2E-76 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup JDM601_0005 346ee120b7bb8d36db8b1fc47ef4b28a 671 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 7 671 4.7E-296 T 12-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 JDM601_0005 346ee120b7bb8d36db8b1fc47ef4b28a 671 SMART SM00433 36 664 0.0 T 12-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 JDM601_0005 346ee120b7bb8d36db8b1fc47ef4b28a 671 Pfam PF00204 DNA gyrase B 251 419 2.2E-63 T 12-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 JDM601_0005 346ee120b7bb8d36db8b1fc47ef4b28a 671 PRINTS PR01159 DNA gyrase subunit B signature 194 207 8.7E-73 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 JDM601_0005 346ee120b7bb8d36db8b1fc47ef4b28a 671 PRINTS PR01159 DNA gyrase subunit B signature 7 17 8.7E-73 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 JDM601_0005 346ee120b7bb8d36db8b1fc47ef4b28a 671 PRINTS PR01159 DNA gyrase subunit B signature 179 194 8.7E-73 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 JDM601_0005 346ee120b7bb8d36db8b1fc47ef4b28a 671 PRINTS PR01159 DNA gyrase subunit B signature 390 404 8.7E-73 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 JDM601_0005 346ee120b7bb8d36db8b1fc47ef4b28a 671 PRINTS PR01159 DNA gyrase subunit B signature 342 358 8.7E-73 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 JDM601_0005 346ee120b7bb8d36db8b1fc47ef4b28a 671 PRINTS PR01159 DNA gyrase subunit B signature 500 509 8.7E-73 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 JDM601_0005 346ee120b7bb8d36db8b1fc47ef4b28a 671 PRINTS PR01159 DNA gyrase subunit B signature 404 424 8.7E-73 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 JDM601_0005 346ee120b7bb8d36db8b1fc47ef4b28a 671 PRINTS PR01159 DNA gyrase subunit B signature 624 636 8.7E-73 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 JDM601_0005 346ee120b7bb8d36db8b1fc47ef4b28a 671 PRINTS PR01159 DNA gyrase subunit B signature 250 272 8.7E-73 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 JDM601_0005 346ee120b7bb8d36db8b1fc47ef4b28a 671 PRINTS PR01159 DNA gyrase subunit B signature 640 656 8.7E-73 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 JDM601_0005 346ee120b7bb8d36db8b1fc47ef4b28a 671 SMART SM00387 32 174 5.5E-25 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JDM601_0005 346ee120b7bb8d36db8b1fc47ef4b28a 671 Gene3D G3DSA:3.40.50.670 429 671 7.8E-98 T 12-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 JDM601_0005 346ee120b7bb8d36db8b1fc47ef4b28a 671 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 34 172 2.5E-21 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JDM601_0005 346ee120b7bb8d36db8b1fc47ef4b28a 671 ProSitePatterns PS00177 DNA topoisomerase II signature. 452 460 - T 12-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 JDM601_0005 346ee120b7bb8d36db8b1fc47ef4b28a 671 Pfam PF01751 Toprim domain 449 559 1.5E-16 T 12-10-2018 IPR006171 TOPRIM domain JDM601_0005 346ee120b7bb8d36db8b1fc47ef4b28a 671 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 603 659 5.6E-26 T 12-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 JDM601_0005 346ee120b7bb8d36db8b1fc47ef4b28a 671 SUPERFAMILY SSF56719 424 666 1.86E-81 T 12-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 JDM601_3691 41dcbb69dca2eb8acc8eb4af1beaf7cf 337 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 202 325 9.4E-15 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 JDM601_3691 41dcbb69dca2eb8acc8eb4af1beaf7cf 337 Gene3D G3DSA:1.10.540.10 1 101 6.1E-15 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 JDM601_3691 41dcbb69dca2eb8acc8eb4af1beaf7cf 337 SUPERFAMILY SSF47203 201 324 6.12E-23 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 JDM601_3691 41dcbb69dca2eb8acc8eb4af1beaf7cf 337 Gene3D G3DSA:1.20.140.10 195 334 5.1E-23 T 12-10-2018 JDM601_3691 41dcbb69dca2eb8acc8eb4af1beaf7cf 337 SUPERFAMILY SSF56645 2 185 7.75E-22 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 JDM601_3691 41dcbb69dca2eb8acc8eb4af1beaf7cf 337 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 22 99 2.9E-10 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 JDM601_2794 4053310cb29caa38f7b6fd3a17b5a5ea 492 Gene3D G3DSA:1.10.630.10 52 491 1.0E-101 T 12-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_2794 4053310cb29caa38f7b6fd3a17b5a5ea 492 PRINTS PR00465 E-class P450 group IV signature 398 416 2.7E-23 T 12-10-2018 IPR002403 Cytochrome P450, E-class, group IV GO:0004497|GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_2794 4053310cb29caa38f7b6fd3a17b5a5ea 492 PRINTS PR00465 E-class P450 group IV signature 349 365 2.7E-23 T 12-10-2018 IPR002403 Cytochrome P450, E-class, group IV GO:0004497|GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_2794 4053310cb29caa38f7b6fd3a17b5a5ea 492 PRINTS PR00465 E-class P450 group IV signature 439 457 2.7E-23 T 12-10-2018 IPR002403 Cytochrome P450, E-class, group IV GO:0004497|GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_2794 4053310cb29caa38f7b6fd3a17b5a5ea 492 PRINTS PR00465 E-class P450 group IV signature 56 73 2.7E-23 T 12-10-2018 IPR002403 Cytochrome P450, E-class, group IV GO:0004497|GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_2794 4053310cb29caa38f7b6fd3a17b5a5ea 492 PRINTS PR00465 E-class P450 group IV signature 382 396 2.7E-23 T 12-10-2018 IPR002403 Cytochrome P450, E-class, group IV GO:0004497|GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_2794 4053310cb29caa38f7b6fd3a17b5a5ea 492 PRINTS PR00465 E-class P450 group IV signature 423 439 2.7E-23 T 12-10-2018 IPR002403 Cytochrome P450, E-class, group IV GO:0004497|GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_2794 4053310cb29caa38f7b6fd3a17b5a5ea 492 PRINTS PR00465 E-class P450 group IV signature 294 320 2.7E-23 T 12-10-2018 IPR002403 Cytochrome P450, E-class, group IV GO:0004497|GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_2794 4053310cb29caa38f7b6fd3a17b5a5ea 492 Pfam PF00067 Cytochrome P450 62 466 5.3E-66 T 12-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_2794 4053310cb29caa38f7b6fd3a17b5a5ea 492 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 432 441 - T 12-10-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 JDM601_2794 4053310cb29caa38f7b6fd3a17b5a5ea 492 SUPERFAMILY SSF48264 56 491 2.49E-99 T 12-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_3400 e4351fdc0bea8ffb3355dc446207f71c 268 Gene3D G3DSA:3.90.226.10 1 210 1.1E-80 T 12-10-2018 JDM601_3400 e4351fdc0bea8ffb3355dc446207f71c 268 SUPERFAMILY SSF52096 2 266 2.23E-71 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily JDM601_3400 e4351fdc0bea8ffb3355dc446207f71c 268 Gene3D G3DSA:1.10.12.10 211 268 4.6E-23 T 12-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal JDM601_3400 e4351fdc0bea8ffb3355dc446207f71c 268 Pfam PF00378 Enoyl-CoA hydratase/isomerase 16 266 7.6E-46 T 12-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 JDM601_1671 f8f27f1b1ce20f6ba627115ea213aaa6 239 Gene3D G3DSA:2.60.120.620 77 235 2.0E-8 T 12-10-2018 JDM601_1671 f8f27f1b1ce20f6ba627115ea213aaa6 239 Pfam PF09859 Oxygenase, catalysing oxidative methylation of damaged DNA 67 238 4.5E-80 T 12-10-2018 IPR018655 Protein of unknown function DUF2086 JDM601_1107 a1e5a827ffc3c378e9fa99016eca33e5 309 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 187 0.0045 T 12-10-2018 JDM601_1107 a1e5a827ffc3c378e9fa99016eca33e5 309 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 144 152 1.1E-6 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_1107 a1e5a827ffc3c378e9fa99016eca33e5 309 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 91 102 1.1E-6 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_1107 a1e5a827ffc3c378e9fa99016eca33e5 309 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 164 183 1.1E-6 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_1107 a1e5a827ffc3c378e9fa99016eca33e5 309 Pfam PF00106 short chain dehydrogenase 7 196 2.7E-36 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_1107 a1e5a827ffc3c378e9fa99016eca33e5 309 SUPERFAMILY SSF51735 1 262 6.15E-56 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_1107 a1e5a827ffc3c378e9fa99016eca33e5 309 Gene3D G3DSA:3.40.50.720 256 287 9.4E-65 T 12-10-2018 JDM601_1107 a1e5a827ffc3c378e9fa99016eca33e5 309 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 164 183 2.3E-24 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_1107 a1e5a827ffc3c378e9fa99016eca33e5 309 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 185 202 2.3E-24 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_1107 a1e5a827ffc3c378e9fa99016eca33e5 309 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 91 102 2.3E-24 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_1107 a1e5a827ffc3c378e9fa99016eca33e5 309 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 138 154 2.3E-24 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_1107 a1e5a827ffc3c378e9fa99016eca33e5 309 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 215 235 2.3E-24 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_1107 a1e5a827ffc3c378e9fa99016eca33e5 309 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 2.3E-24 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_1107 a1e5a827ffc3c378e9fa99016eca33e5 309 Gene3D G3DSA:3.40.50.720 8 255 9.4E-65 T 12-10-2018 JDM601_1814 fd44a290db54525601ee4cccc3a31d62 969 Gene3D G3DSA:3.40.50.300 627 946 1.3E-144 T 12-10-2018 JDM601_1814 fd44a290db54525601ee4cccc3a31d62 969 ProSitePatterns PS00211 ABC transporters family signature. 840 854 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JDM601_1814 fd44a290db54525601ee4cccc3a31d62 969 SUPERFAMILY SSF52540 11 580 1.55E-43 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_1814 fd44a290db54525601ee4cccc3a31d62 969 Gene3D G3DSA:3.30.190.20 131 248 2.8E-260 T 12-10-2018 JDM601_1814 fd44a290db54525601ee4cccc3a31d62 969 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 5 934 0.0 T 12-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 JDM601_1814 fd44a290db54525601ee4cccc3a31d62 969 ProSitePatterns PS00211 ABC transporters family signature. 498 512 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JDM601_1814 fd44a290db54525601ee4cccc3a31d62 969 Gene3D G3DSA:3.40.50.300 6 605 2.8E-260 T 12-10-2018 JDM601_1814 fd44a290db54525601ee4cccc3a31d62 969 Gene3D G3DSA:1.10.8.280 292 409 2.8E-260 T 12-10-2018 JDM601_1814 fd44a290db54525601ee4cccc3a31d62 969 Gene3D G3DSA:1.20.1580.10 91 503 2.8E-260 T 12-10-2018 JDM601_1814 fd44a290db54525601ee4cccc3a31d62 969 Hamap MF_00205 UvrABC system protein A [uvrA]. 2 950 22.858 T 12-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 JDM601_1814 fd44a290db54525601ee4cccc3a31d62 969 SUPERFAMILY SSF52540 629 924 4.33E-52 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_1814 fd44a290db54525601ee4cccc3a31d62 969 Pfam PF00005 ABC transporter 634 870 2.5E-9 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JDM601_1814 fd44a290db54525601ee4cccc3a31d62 969 Gene3D G3DSA:1.20.1580.10 702 840 1.3E-144 T 12-10-2018 JDM601_2340 2e3b4e18ba66827b2f26ee9270b550e9 150 Pfam PF03652 Holliday junction resolvase 1 134 1.7E-35 T 12-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 JDM601_2340 2e3b4e18ba66827b2f26ee9270b550e9 150 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 1 133 1.0E-25 T 12-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 JDM601_2340 2e3b4e18ba66827b2f26ee9270b550e9 150 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 1 136 18.427 T 12-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 JDM601_2340 2e3b4e18ba66827b2f26ee9270b550e9 150 Gene3D G3DSA:3.30.420.140 1 143 1.7E-38 T 12-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 JDM601_2340 2e3b4e18ba66827b2f26ee9270b550e9 150 SMART SM00732 1 101 1.7E-15 T 12-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 JDM601_2340 2e3b4e18ba66827b2f26ee9270b550e9 150 SUPERFAMILY SSF53098 1 135 4.7E-30 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily JDM601_0757 916850dd1f9de6c819ae16ada85fa307 1162 Gene3D G3DSA:3.40.50.300 436 640 9.6E-40 T 12-10-2018 JDM601_0757 916850dd1f9de6c819ae16ada85fa307 1162 Pfam PF13020 Domain of unknown function (DUF3883) 1039 1120 8.2E-13 T 12-10-2018 IPR024975 Domain of unknown function DUF3883 JDM601_0757 916850dd1f9de6c819ae16ada85fa307 1162 SUPERFAMILY SSF52540 104 295 3.99E-33 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_0757 916850dd1f9de6c819ae16ada85fa307 1162 Pfam PF00176 SNF2 family N-terminal domain 131 297 9.9E-12 T 12-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 JDM601_0757 916850dd1f9de6c819ae16ada85fa307 1162 Pfam PF00271 Helicase conserved C-terminal domain 509 609 9.6E-20 T 12-10-2018 IPR001650 Helicase, C-terminal JDM601_0757 916850dd1f9de6c819ae16ada85fa307 1162 SUPERFAMILY SSF52540 227 650 2.39E-46 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_0757 916850dd1f9de6c819ae16ada85fa307 1162 SMART SM00490 524 609 5.7E-20 T 12-10-2018 IPR001650 Helicase, C-terminal JDM601_0757 916850dd1f9de6c819ae16ada85fa307 1162 SMART SM00487 106 314 3.2E-19 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain JDM601_0757 916850dd1f9de6c819ae16ada85fa307 1162 Gene3D G3DSA:3.40.50.10810 107 377 4.8E-61 T 12-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily JDM601_1466 cb992f172457b5243cac595626954c7c 88 SUPERFAMILY SSF110324 2 81 1.6E-31 T 12-10-2018 JDM601_1466 cb992f172457b5243cac595626954c7c 88 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 83 27.291 T 12-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JDM601_1466 cb992f172457b5243cac595626954c7c 88 PRINTS PR00063 Ribosomal protein L27 signature 29 53 1.1E-35 T 12-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JDM601_1466 cb992f172457b5243cac595626954c7c 88 PRINTS PR00063 Ribosomal protein L27 signature 54 78 1.1E-35 T 12-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JDM601_1466 cb992f172457b5243cac595626954c7c 88 PRINTS PR00063 Ribosomal protein L27 signature 4 28 1.1E-35 T 12-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JDM601_1466 cb992f172457b5243cac595626954c7c 88 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 81 7.7E-36 T 12-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JDM601_1466 cb992f172457b5243cac595626954c7c 88 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 71 3.0E-16 T 12-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JDM601_1466 cb992f172457b5243cac595626954c7c 88 Pfam PF01016 Ribosomal L27 protein 2 80 6.6E-36 T 12-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JDM601_1466 cb992f172457b5243cac595626954c7c 88 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 12-10-2018 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 JDM601_1466 cb992f172457b5243cac595626954c7c 88 Gene3D G3DSA:2.40.50.100 20 84 1.2E-26 T 12-10-2018 JDM601_2947 57473428991169f730e77c7ef3cb0864 258 SMART SM00882 7 236 4.5E-82 T 12-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 JDM601_2947 57473428991169f730e77c7ef3cb0864 258 ProSitePatterns PS01273 Coenzyme A transferases signature 1. 19 34 - T 12-10-2018 IPR004163 Coenzyme A transferase binding site GO:0008410 Reactome: R-HSA-77108 JDM601_2947 57473428991169f730e77c7ef3cb0864 258 TIGRFAM TIGR02429 pcaI_scoA_fam: 3-oxoacid CoA-transferase, A subunit 3 237 2.1E-68 T 12-10-2018 IPR012792 3-oxoacid CoA-transferase, subunit A GO:0008410 Reactome: R-HSA-77108 JDM601_2947 57473428991169f730e77c7ef3cb0864 258 Pfam PF01144 Coenzyme A transferase 7 235 1.3E-67 T 12-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 JDM601_2947 57473428991169f730e77c7ef3cb0864 258 Gene3D G3DSA:3.40.1080.10 1 235 1.1E-95 T 12-10-2018 JDM601_2947 57473428991169f730e77c7ef3cb0864 258 SUPERFAMILY SSF100950 3 239 2.03E-83 T 12-10-2018 IPR037171 NagB/RpiA transferase-like JDM601_0357 1dab73d3c2bf0c947daa9e51c41f2186 343 Pfam PF01116 Fructose-bisphosphate aldolase class-II 9 340 5.6E-83 T 12-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 JDM601_0357 1dab73d3c2bf0c947daa9e51c41f2186 343 Gene3D G3DSA:3.20.20.70 1 343 2.8E-134 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JDM601_0357 1dab73d3c2bf0c947daa9e51c41f2186 343 SUPERFAMILY SSF51569 4 340 4.58E-99 T 12-10-2018 JDM601_0357 1dab73d3c2bf0c947daa9e51c41f2186 343 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 86 97 - T 12-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 JDM601_0357 1dab73d3c2bf0c947daa9e51c41f2186 343 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 10 340 3.6E-75 T 12-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 JDM601_0357 1dab73d3c2bf0c947daa9e51c41f2186 343 TIGRFAM TIGR01520 FruBisAldo_II_A: fructose-bisphosphate aldolase, class II 3 340 1.5E-150 T 12-10-2018 IPR006411 Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385 JDM601_0357 1dab73d3c2bf0c947daa9e51c41f2186 343 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 158 169 - T 12-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 JDM601_0357 1dab73d3c2bf0c947daa9e51c41f2186 343 PIRSF PIRSF001359 6 341 6.7E-66 T 12-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 JDM601_3514 f0f2b4d962cd8cd8a88981b4a54faa98 255 SUPERFAMILY SSF52096 9 253 3.42E-62 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily JDM601_3514 f0f2b4d962cd8cd8a88981b4a54faa98 255 Gene3D G3DSA:3.90.226.10 2 254 5.9E-87 T 12-10-2018 JDM601_3514 f0f2b4d962cd8cd8a88981b4a54faa98 255 Pfam PF00378 Enoyl-CoA hydratase/isomerase 18 243 5.9E-37 T 12-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 JDM601_0569 5f8c8813cb06e8f6f9a2a3d9297a57b5 134 Hamap MF_00265 tRNA(fMet)-specific endonuclease VapC [vapC]. 2 129 13.693 T 12-10-2018 IPR022907 VapC family GO:0004540 JDM601_0569 5f8c8813cb06e8f6f9a2a3d9297a57b5 134 Pfam PF01850 PIN domain 2 122 4.7E-16 T 12-10-2018 IPR002716 PIN domain JDM601_0569 5f8c8813cb06e8f6f9a2a3d9297a57b5 134 Gene3D G3DSA:3.40.50.1010 1 133 1.1E-34 T 12-10-2018 JDM601_0569 5f8c8813cb06e8f6f9a2a3d9297a57b5 134 SUPERFAMILY SSF88723 1 124 2.8E-19 T 12-10-2018 IPR029060 PIN-like domain superfamily JDM601_0432 a0e2f2fd1dec1e820e82392cca0a6109 133 ProDom PD086639 PYRIDOXAMINE 5'-PHOSPHATE MB0449C OXIDASE-RELATED RV0441C/MT0457 5 105 1.0E-22 T 12-10-2018 IPR020145 Uncharacterised protein family, MT0457 JDM601_0432 a0e2f2fd1dec1e820e82392cca0a6109 133 SUPERFAMILY SSF50475 11 108 2.24E-13 T 12-10-2018 JDM601_0432 a0e2f2fd1dec1e820e82392cca0a6109 133 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 12 92 1.0E-4 T 12-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 JDM601_0432 a0e2f2fd1dec1e820e82392cca0a6109 133 Gene3D G3DSA:2.30.110.10 8 119 1.3E-11 T 12-10-2018 IPR012349 FMN-binding split barrel GO:0048037 JDM601_2435 2ff31686ebe4f746f8be277f89c05102 220 Gene3D G3DSA:3.30.70.1450 136 217 6.4E-14 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 JDM601_2435 2ff31686ebe4f746f8be277f89c05102 220 Pfam PF02254 TrkA-N domain 3 118 1.7E-26 T 12-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 JDM601_2435 2ff31686ebe4f746f8be277f89c05102 220 SUPERFAMILY SSF116726 133 215 2.49E-12 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 JDM601_2435 2ff31686ebe4f746f8be277f89c05102 220 PRINTS PR00335 TrkA potassium uptake protein signature 48 58 2.0E-9 T 12-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 JDM601_2435 2ff31686ebe4f746f8be277f89c05102 220 PRINTS PR00335 TrkA potassium uptake protein signature 2 16 2.0E-9 T 12-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 JDM601_2435 2ff31686ebe4f746f8be277f89c05102 220 PRINTS PR00335 TrkA potassium uptake protein signature 19 33 2.0E-9 T 12-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 JDM601_2435 2ff31686ebe4f746f8be277f89c05102 220 PRINTS PR00335 TrkA potassium uptake protein signature 72 86 2.0E-9 T 12-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 JDM601_2435 2ff31686ebe4f746f8be277f89c05102 220 PRINTS PR00335 TrkA potassium uptake protein signature 59 69 2.0E-9 T 12-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 JDM601_2435 2ff31686ebe4f746f8be277f89c05102 220 Pfam PF02080 TrkA-C domain 150 216 3.3E-10 T 12-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 JDM601_2435 2ff31686ebe4f746f8be277f89c05102 220 Gene3D G3DSA:3.40.50.720 2 132 3.3E-31 T 12-10-2018 JDM601_2435 2ff31686ebe4f746f8be277f89c05102 220 SUPERFAMILY SSF51735 1 144 1.11E-31 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_2586 3fba6643561ebc03daed7bf9bcb4cc8c 593 SUPERFAMILY SSF54427 22 116 8.36E-7 T 12-10-2018 IPR032710 NTF2-like domain superfamily JDM601_2586 3fba6643561ebc03daed7bf9bcb4cc8c 593 Pfam PF00905 Penicillin binding protein transpeptidase domain 315 571 9.2E-40 T 12-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 JDM601_2586 3fba6643561ebc03daed7bf9bcb4cc8c 593 Pfam PF05223 NTF2-like N-terminal transpeptidase domain 21 128 7.2E-22 T 12-10-2018 IPR007887 NTF2-like N-terminal transpeptidase GO:0046677 JDM601_2586 3fba6643561ebc03daed7bf9bcb4cc8c 593 SUPERFAMILY SSF56601 295 586 7.51E-58 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like JDM601_2586 3fba6643561ebc03daed7bf9bcb4cc8c 593 Gene3D G3DSA:3.40.710.10 294 587 3.2E-60 T 12-10-2018 JDM601_3074 3569cd39b1643d2d72d5f13046ad00da 159 ProDom PD886639 ANTIGEN IMMUNOGENIC EXTRACELLULAR MPT63 MPB63 PRECURSOR IMMUNOPROTECTIVE SIGNAL SEQUENCING DIRECT 32 157 5.0E-38 T 12-10-2018 IPR015250 MPT63-like GO:0005615 JDM601_3074 3569cd39b1643d2d72d5f13046ad00da 159 Pfam PF09167 Domain of unknown function (DUF1942) 32 155 2.3E-49 T 12-10-2018 IPR015250 MPT63-like GO:0005615 JDM601_3074 3569cd39b1643d2d72d5f13046ad00da 159 SUPERFAMILY SSF81982 30 156 1.31E-46 T 12-10-2018 JDM601_3074 3569cd39b1643d2d72d5f13046ad00da 159 Gene3D G3DSA:2.60.40.1240 28 157 2.8E-46 T 12-10-2018 IPR029050 Immunoprotective extracellular, immunoglobulin-like domain superfamily JDM601_2397 d4b40c383d50ce896fd896906734e916 686 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 193 235 3.0E-11 T 12-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 JDM601_2397 d4b40c383d50ce896fd896906734e916 686 Gene3D G3DSA:3.30.930.10 241 563 4.7E-116 T 12-10-2018 JDM601_2397 d4b40c383d50ce896fd896906734e916 686 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 71 657 8.5E-191 T 12-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 JDM601_2397 d4b40c383d50ce896fd896906734e916 686 SMART SM00863 179 235 9.9E-17 T 12-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 JDM601_2397 d4b40c383d50ce896fd896906734e916 686 SUPERFAMILY SSF55186 63 256 2.88E-51 T 12-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 JDM601_2397 d4b40c383d50ce896fd896906734e916 686 Gene3D G3DSA:3.30.54.20 129 203 6.7E-57 T 12-10-2018 JDM601_2397 d4b40c383d50ce896fd896906734e916 686 SUPERFAMILY SSF55681 259 556 3.64E-93 T 12-10-2018 JDM601_2397 d4b40c383d50ce896fd896906734e916 686 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 354 560 1.7E-34 T 12-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 JDM601_2397 d4b40c383d50ce896fd896906734e916 686 Gene3D G3DSA:3.30.980.10 68 238 6.7E-57 T 12-10-2018 JDM601_2397 d4b40c383d50ce896fd896906734e916 686 PRINTS PR01047 Threonyl-tRNA synthetase signature 565 577 6.6E-52 T 12-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 JDM601_2397 d4b40c383d50ce896fd896906734e916 686 PRINTS PR01047 Threonyl-tRNA synthetase signature 538 551 6.6E-52 T 12-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 JDM601_2397 d4b40c383d50ce896fd896906734e916 686 PRINTS PR01047 Threonyl-tRNA synthetase signature 392 415 6.6E-52 T 12-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 JDM601_2397 d4b40c383d50ce896fd896906734e916 686 PRINTS PR01047 Threonyl-tRNA synthetase signature 359 387 6.6E-52 T 12-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 JDM601_2397 d4b40c383d50ce896fd896906734e916 686 PRINTS PR01047 Threonyl-tRNA synthetase signature 495 523 6.6E-52 T 12-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 JDM601_2397 d4b40c383d50ce896fd896906734e916 686 Pfam PF03129 Anticodon binding domain 572 659 2.5E-15 T 12-10-2018 IPR004154 Anticodon-binding JDM601_2397 d4b40c383d50ce896fd896906734e916 686 Gene3D G3DSA:3.40.50.800 564 670 9.2E-21 T 12-10-2018 IPR036621 Anticodon-binding domain superfamily JDM601_2397 d4b40c383d50ce896fd896906734e916 686 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 65 665 33.031 T 12-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 JDM601_2397 d4b40c383d50ce896fd896906734e916 686 SUPERFAMILY SSF52954 560 668 1.24E-26 T 12-10-2018 JDM601_3277 e5ee8674d7b42022c72c2a2a50ad03a1 209 ProSitePatterns PS00155 Cutinase, serine active site. 102 114 - T 12-10-2018 IPR011150 Cutinase, monofunctional GO:0005576|GO:0050525 JDM601_3277 e5ee8674d7b42022c72c2a2a50ad03a1 209 SUPERFAMILY SSF53474 30 208 1.56E-40 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_3277 e5ee8674d7b42022c72c2a2a50ad03a1 209 Gene3D G3DSA:3.40.50.1820 3 209 3.3E-50 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_3277 e5ee8674d7b42022c72c2a2a50ad03a1 209 SMART SM01110 29 209 1.7E-87 T 12-10-2018 IPR000675 Cutinase/acetylxylan esterase GO:0016787 JDM601_3277 e5ee8674d7b42022c72c2a2a50ad03a1 209 Pfam PF01083 Cutinase 31 207 2.9E-49 T 12-10-2018 IPR000675 Cutinase/acetylxylan esterase GO:0016787 JDM601_3451 fcaf7fbb2b632c5939199bb63fb6a839 275 PRINTS PR00412 Epoxide hydrolase signature 249 271 4.5E-5 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 JDM601_3451 fcaf7fbb2b632c5939199bb63fb6a839 275 PRINTS PR00412 Epoxide hydrolase signature 54 69 4.5E-5 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 JDM601_3451 fcaf7fbb2b632c5939199bb63fb6a839 275 Pfam PF12697 Alpha/beta hydrolase family 28 266 1.4E-19 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 JDM601_3451 fcaf7fbb2b632c5939199bb63fb6a839 275 SUPERFAMILY SSF53474 2 273 3.24E-46 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_3451 fcaf7fbb2b632c5939199bb63fb6a839 275 Gene3D G3DSA:3.40.50.1820 3 274 7.0E-58 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_3451 fcaf7fbb2b632c5939199bb63fb6a839 275 PRINTS PR00111 Alpha/beta hydrolase fold signature 99 112 5.6E-9 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 JDM601_3451 fcaf7fbb2b632c5939199bb63fb6a839 275 PRINTS PR00111 Alpha/beta hydrolase fold signature 218 232 5.6E-9 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 JDM601_3451 fcaf7fbb2b632c5939199bb63fb6a839 275 PRINTS PR00111 Alpha/beta hydrolase fold signature 54 69 5.6E-9 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 JDM601_0855 def73a4b917b4fe5fc61a1c0199efc3d 404 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 45 68 2.0E-9 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_0855 def73a4b917b4fe5fc61a1c0199efc3d 404 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 24 37 2.0E-9 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_0855 def73a4b917b4fe5fc61a1c0199efc3d 404 Pfam PF00440 Bacterial regulatory proteins, tetR family 24 69 5.6E-17 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_0855 def73a4b917b4fe5fc61a1c0199efc3d 404 Pfam PF00440 Bacterial regulatory proteins, tetR family 227 273 3.9E-11 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_0855 def73a4b917b4fe5fc61a1c0199efc3d 404 Gene3D G3DSA:1.10.10.60 18 60 1.9E-19 T 12-10-2018 JDM601_0855 def73a4b917b4fe5fc61a1c0199efc3d 404 Gene3D G3DSA:1.10.10.60 208 268 8.8E-14 T 12-10-2018 JDM601_0855 def73a4b917b4fe5fc61a1c0199efc3d 404 Gene3D G3DSA:1.10.357.10 269 401 2.2E-22 T 12-10-2018 JDM601_0855 def73a4b917b4fe5fc61a1c0199efc3d 404 Gene3D G3DSA:1.10.357.10 62 203 1.2E-22 T 12-10-2018 JDM601_0855 def73a4b917b4fe5fc61a1c0199efc3d 404 SUPERFAMILY SSF46689 12 96 6.62E-18 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JDM601_0855 def73a4b917b4fe5fc61a1c0199efc3d 404 SUPERFAMILY SSF46689 215 297 5.99E-16 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JDM601_4005 18231b83645db2e881bd923a140912c2 257 SUPERFAMILY SSF53187 38 247 9.42E-34 T 12-10-2018 JDM601_4005 18231b83645db2e881bd923a140912c2 257 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 41 244 9.6E-33 T 12-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 JDM601_4005 18231b83645db2e881bd923a140912c2 257 Gene3D G3DSA:3.40.630.40 36 252 2.4E-56 T 12-10-2018 JDM601_4005 18231b83645db2e881bd923a140912c2 257 SMART SM00646 123 244 1.5E-28 T 12-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 JDM601_1664 cac78427ff5e5537de44d0132632a09f 377 PIRSF PIRSF037489 1 371 7.7E-135 T 12-10-2018 IPR017221 GTP cyclohydrolase 1 type 2//Nif3, bacteria JDM601_1664 cac78427ff5e5537de44d0132632a09f 377 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 7 353 7.2E-61 T 12-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 JDM601_1664 cac78427ff5e5537de44d0132632a09f 377 SUPERFAMILY SSF102705 4 369 6.54E-106 T 12-10-2018 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily JDM601_1664 cac78427ff5e5537de44d0132632a09f 377 Gene3D G3DSA:3.40.1390.30 2 120 1.5E-23 T 12-10-2018 JDM601_1664 cac78427ff5e5537de44d0132632a09f 377 Gene3D G3DSA:3.40.1390.30 232 336 4.4E-10 T 12-10-2018 JDM601_1664 cac78427ff5e5537de44d0132632a09f 377 Gene3D G3DSA:3.30.70.120 132 231 1.1E-37 T 12-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal JDM601_1664 cac78427ff5e5537de44d0132632a09f 377 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 4 353 7.4E-40 T 12-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 JDM601_2151 f00c2fcda56b87429592625dbbcbc76a 522 TIGRFAM TIGR00551 nadB: L-aspartate oxidase 10 494 3.5E-181 T 12-10-2018 IPR005288 L-aspartate oxidase GO:0005737|GO:0008734|GO:0009435|GO:0055114 KEGG: 00250+1.4.3.16|KEGG: 00760+1.4.3.16|MetaCyc: PWY-5316|MetaCyc: PWY-7342 JDM601_2151 f00c2fcda56b87429592625dbbcbc76a 522 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 361 368 3.2E-6 T 12-10-2018 JDM601_2151 f00c2fcda56b87429592625dbbcbc76a 522 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 12 34 3.2E-6 T 12-10-2018 JDM601_2151 f00c2fcda56b87429592625dbbcbc76a 522 Gene3D G3DSA:1.20.58.100 412 490 2.1E-13 T 12-10-2018 JDM601_2151 f00c2fcda56b87429592625dbbcbc76a 522 SUPERFAMILY SSF51905 10 403 3.54E-51 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_2151 f00c2fcda56b87429592625dbbcbc76a 522 Pfam PF02910 Fumarate reductase flavoprotein C-term 422 501 3.3E-7 T 12-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 JDM601_2151 f00c2fcda56b87429592625dbbcbc76a 522 SUPERFAMILY SSF46977 417 512 3.79E-20 T 12-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 JDM601_2151 f00c2fcda56b87429592625dbbcbc76a 522 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 346 368 6.0E-9 T 12-10-2018 JDM601_2151 f00c2fcda56b87429592625dbbcbc76a 522 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 13 32 6.0E-9 T 12-10-2018 JDM601_2151 f00c2fcda56b87429592625dbbcbc76a 522 Gene3D G3DSA:3.90.700.10 239 338 3.7E-127 T 12-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 JDM601_2151 f00c2fcda56b87429592625dbbcbc76a 522 Gene3D G3DSA:3.50.50.60 12 394 3.7E-127 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_2151 f00c2fcda56b87429592625dbbcbc76a 522 SUPERFAMILY SSF56425 229 343 1.48E-31 T 12-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 JDM601_2151 f00c2fcda56b87429592625dbbcbc76a 522 Pfam PF00890 FAD binding domain 12 383 6.1E-86 T 12-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 JDM601_2084 6448329b76314b60d93997cf416a42af 354 Gene3D G3DSA:3.40.50.300 3 223 2.1E-62 T 12-10-2018 JDM601_2084 6448329b76314b60d93997cf416a42af 354 Pfam PF08402 TOBE domain 275 346 5.4E-6 T 12-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 JDM601_2084 6448329b76314b60d93997cf416a42af 354 SUPERFAMILY SSF52540 4 245 2.16E-82 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_2084 6448329b76314b60d93997cf416a42af 354 SMART SM00382 30 213 1.4E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain JDM601_2084 6448329b76314b60d93997cf416a42af 354 Gene3D G3DSA:2.40.50.940 224 347 1.7E-27 T 12-10-2018 JDM601_2084 6448329b76314b60d93997cf416a42af 354 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JDM601_2084 6448329b76314b60d93997cf416a42af 354 Pfam PF00005 ABC transporter 21 163 2.8E-28 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JDM601_2084 6448329b76314b60d93997cf416a42af 354 SUPERFAMILY SSF50331 238 352 3.68E-23 T 12-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal JDM601_2084 6448329b76314b60d93997cf416a42af 354 Gene3D G3DSA:2.40.50.140 282 338 1.7E-27 T 12-10-2018 JDM601_1195 52d393906589b514e1aee905dff41f3b 238 Gene3D G3DSA:1.10.1740.10 55 133 2.1E-24 T 12-10-2018 JDM601_1195 52d393906589b514e1aee905dff41f3b 238 Pfam PF04542 Sigma-70 region 2 67 133 4.1E-22 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 JDM601_1195 52d393906589b514e1aee905dff41f3b 238 SUPERFAMILY SSF88946 63 152 2.04E-25 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 JDM601_1195 52d393906589b514e1aee905dff41f3b 238 Gene3D G3DSA:1.10.10.10 134 224 1.7E-19 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JDM601_1195 52d393906589b514e1aee905dff41f3b 238 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 64 220 5.8E-30 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 JDM601_1195 52d393906589b514e1aee905dff41f3b 238 Pfam PF08281 Sigma-70, region 4 166 216 8.2E-15 T 12-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 JDM601_1195 52d393906589b514e1aee905dff41f3b 238 SUPERFAMILY SSF88659 143 222 2.06E-16 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like JDM601_0678 f13bb534b631bc6acdb5ff97057b6995 129 SUPERFAMILY SSF48300 5 64 1.19E-14 T 12-10-2018 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JDM601_0678 f13bb534b631bc6acdb5ff97057b6995 129 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 63 100 2.0E-13 T 12-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JDM601_0678 f13bb534b631bc6acdb5ff97057b6995 129 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 6 52 6.1E-18 T 12-10-2018 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JDM601_0678 f13bb534b631bc6acdb5ff97057b6995 129 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 3 129 24.319 T 12-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JDM601_0678 f13bb534b631bc6acdb5ff97057b6995 129 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 62 129 1.2E-27 T 12-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JDM601_0678 f13bb534b631bc6acdb5ff97057b6995 129 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 129 4.3E-50 T 12-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JDM601_0678 f13bb534b631bc6acdb5ff97057b6995 129 Gene3D G3DSA:3.30.1390.10 58 129 5.8E-28 T 12-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like JDM601_0678 f13bb534b631bc6acdb5ff97057b6995 129 SUPERFAMILY SSF54736 57 129 1.45E-21 T 12-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like JDM601_0678 f13bb534b631bc6acdb5ff97057b6995 129 Gene3D G3DSA:1.20.5.710 4 57 2.6E-19 T 12-10-2018 JDM601_1963 4c2216511f3c4ffba59e505a56a0a962 195 SUPERFAMILY SSF52833 4 189 6.69E-52 T 12-10-2018 IPR036249 Thioredoxin-like superfamily JDM601_1963 4c2216511f3c4ffba59e505a56a0a962 195 PIRSF PIRSF000239 1 195 3.0E-48 T 12-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 JDM601_1963 4c2216511f3c4ffba59e505a56a0a962 195 Pfam PF00578 AhpC/TSA family 8 146 2.3E-31 T 12-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 JDM601_1963 4c2216511f3c4ffba59e505a56a0a962 195 Gene3D G3DSA:3.40.30.10 2 193 6.9E-53 T 12-10-2018 JDM601_1042 5941f86181d3b2b59a5df5f0ea2a82cc 193 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 22 35 3.5E-7 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_1042 5941f86181d3b2b59a5df5f0ea2a82cc 193 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 43 66 3.5E-7 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_1042 5941f86181d3b2b59a5df5f0ea2a82cc 193 Gene3D G3DSA:1.10.357.10 2 191 1.4E-33 T 12-10-2018 JDM601_1042 5941f86181d3b2b59a5df5f0ea2a82cc 193 SUPERFAMILY SSF48498 90 192 5.45E-7 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily JDM601_1042 5941f86181d3b2b59a5df5f0ea2a82cc 193 Pfam PF16859 Bacterial transcriptional repressor C-terminal 93 185 5.5E-9 T 12-10-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal JDM601_1042 5941f86181d3b2b59a5df5f0ea2a82cc 193 Pfam PF00440 Bacterial regulatory proteins, tetR family 24 64 6.2E-16 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_1042 5941f86181d3b2b59a5df5f0ea2a82cc 193 ProSitePatterns PS01081 TetR-type HTH domain signature. 34 65 - T 12-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site JDM601_1042 5941f86181d3b2b59a5df5f0ea2a82cc 193 SUPERFAMILY SSF46689 16 72 9.48E-14 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JDM601_0014 32b2ca5506d85f4c13f41cf17fcb6f4d 624 Gene3D G3DSA:3.30.200.20 1 94 5.6E-36 T 12-10-2018 JDM601_0014 32b2ca5506d85f4c13f41cf17fcb6f4d 624 Pfam PF00069 Protein kinase domain 11 265 2.3E-48 T 12-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 JDM601_0014 32b2ca5506d85f4c13f41cf17fcb6f4d 624 SUPERFAMILY SSF56112 5 271 3.37E-76 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily JDM601_0014 32b2ca5506d85f4c13f41cf17fcb6f4d 624 Gene3D G3DSA:3.30.10.20 555 624 2.0E-15 T 12-10-2018 JDM601_0014 32b2ca5506d85f4c13f41cf17fcb6f4d 624 Pfam PF03793 PASTA domain 358 419 1.1E-13 T 12-10-2018 IPR005543 PASTA domain JDM601_0014 32b2ca5506d85f4c13f41cf17fcb6f4d 624 Pfam PF03793 PASTA domain 560 622 8.2E-10 T 12-10-2018 IPR005543 PASTA domain JDM601_0014 32b2ca5506d85f4c13f41cf17fcb6f4d 624 Pfam PF03793 PASTA domain 495 554 1.6E-10 T 12-10-2018 IPR005543 PASTA domain JDM601_0014 32b2ca5506d85f4c13f41cf17fcb6f4d 624 Pfam PF03793 PASTA domain 426 486 1.3E-10 T 12-10-2018 IPR005543 PASTA domain JDM601_0014 32b2ca5506d85f4c13f41cf17fcb6f4d 624 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 134 146 - T 12-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 JDM601_0014 32b2ca5506d85f4c13f41cf17fcb6f4d 624 Gene3D G3DSA:3.30.10.20 490 554 2.3E-21 T 12-10-2018 JDM601_0014 32b2ca5506d85f4c13f41cf17fcb6f4d 624 Gene3D G3DSA:3.30.10.20 355 421 5.9E-16 T 12-10-2018 JDM601_0014 32b2ca5506d85f4c13f41cf17fcb6f4d 624 Gene3D G3DSA:3.30.10.20 422 489 2.8E-15 T 12-10-2018 JDM601_0014 32b2ca5506d85f4c13f41cf17fcb6f4d 624 SMART SM00220 11 274 1.4E-66 T 12-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 JDM601_0014 32b2ca5506d85f4c13f41cf17fcb6f4d 624 Gene3D G3DSA:1.10.510.10 96 284 1.1E-58 T 12-10-2018 JDM601_0014 32b2ca5506d85f4c13f41cf17fcb6f4d 624 SMART SM00740 556 624 6.0E-9 T 12-10-2018 IPR005543 PASTA domain JDM601_0014 32b2ca5506d85f4c13f41cf17fcb6f4d 624 SMART SM00740 421 488 9.5E-13 T 12-10-2018 IPR005543 PASTA domain JDM601_0014 32b2ca5506d85f4c13f41cf17fcb6f4d 624 SMART SM00740 489 555 1.5E-10 T 12-10-2018 IPR005543 PASTA domain JDM601_0014 32b2ca5506d85f4c13f41cf17fcb6f4d 624 SMART SM00740 354 420 1.1E-15 T 12-10-2018 IPR005543 PASTA domain JDM601_0014 32b2ca5506d85f4c13f41cf17fcb6f4d 624 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 17 40 - T 12-10-2018 IPR017441 Protein kinase, ATP binding site GO:0005524 JDM601_0956 40b74fa16705126bb35e8af8e1e2a531 205 SUPERFAMILY SSF51197 19 200 2.47E-40 T 12-10-2018 JDM601_0956 40b74fa16705126bb35e8af8e1e2a531 205 Pfam PF13532 2OG-Fe(II) oxygenase superfamily 103 200 5.0E-12 T 12-10-2018 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like JDM601_0956 40b74fa16705126bb35e8af8e1e2a531 205 Gene3D G3DSA:2.60.120.590 14 202 5.2E-37 T 12-10-2018 IPR037151 Alpha-ketoglutarate-dependent dioxygenase AlkB-like superfamily JDM601_1244 27a327fd1aeff500cc59c2af71b73995 199 Pfam PF12802 MarR family 76 136 1.5E-11 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 JDM601_1244 27a327fd1aeff500cc59c2af71b73995 199 Gene3D G3DSA:1.10.10.10 45 192 3.5E-28 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JDM601_1244 27a327fd1aeff500cc59c2af71b73995 199 SMART SM00347 70 173 2.2E-12 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 JDM601_1244 27a327fd1aeff500cc59c2af71b73995 199 SUPERFAMILY SSF46785 38 183 2.09E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JDM601_2367 6e7b944ea3769f573a3c07bf78226272 420 Gene3D G3DSA:3.40.50.800 322 416 1.5E-20 T 12-10-2018 IPR036621 Anticodon-binding domain superfamily JDM601_2367 6e7b944ea3769f573a3c07bf78226272 420 Gene3D G3DSA:3.30.930.10 2 319 6.7E-99 T 12-10-2018 JDM601_2367 6e7b944ea3769f573a3c07bf78226272 420 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 6 406 7.8E-131 T 12-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 JDM601_2367 6e7b944ea3769f573a3c07bf78226272 420 SUPERFAMILY SSF55681 6 314 3.64E-84 T 12-10-2018 JDM601_2367 6e7b944ea3769f573a3c07bf78226272 420 Pfam PF13393 Histidyl-tRNA synthetase 9 308 7.4E-44 T 12-10-2018 JDM601_2367 6e7b944ea3769f573a3c07bf78226272 420 SUPERFAMILY SSF52954 324 418 4.25E-21 T 12-10-2018 JDM601_2367 6e7b944ea3769f573a3c07bf78226272 420 Pfam PF03129 Anticodon binding domain 342 415 4.6E-12 T 12-10-2018 IPR004154 Anticodon-binding JDM601_2367 6e7b944ea3769f573a3c07bf78226272 420 PIRSF PIRSF001549 1 417 2.1E-105 T 12-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 JDM601_2367 6e7b944ea3769f573a3c07bf78226272 420 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 2 417 30.607 T 12-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 JDM601_0414 5f0d4d6b2b04053f03fa9b19b0c4d82f 265 SUPERFAMILY SSF69118 145 250 8.16E-18 T 12-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 JDM601_0414 5f0d4d6b2b04053f03fa9b19b0c4d82f 265 SUPERFAMILY SSF69118 29 113 3.17E-19 T 12-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 JDM601_0414 5f0d4d6b2b04053f03fa9b19b0c4d82f 265 Gene3D G3DSA:1.20.1290.10 24 254 2.6E-43 T 12-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 JDM601_0414 5f0d4d6b2b04053f03fa9b19b0c4d82f 265 Pfam PF02627 Carboxymuconolactone decarboxylase family 169 249 2.2E-10 T 12-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 JDM601_0414 5f0d4d6b2b04053f03fa9b19b0c4d82f 265 Pfam PF02627 Carboxymuconolactone decarboxylase family 30 102 2.3E-8 T 12-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 JDM601_1527 804ed7bfe7007a39e7b83fecc4c3a0a2 1718 SUPERFAMILY SSF51735 1178 1357 7.09E-24 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_1527 804ed7bfe7007a39e7b83fecc4c3a0a2 1718 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 18 267 1.5E-84 T 12-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal JDM601_1527 804ed7bfe7007a39e7b83fecc4c3a0a2 1718 Gene3D G3DSA:3.30.70.250 670 736 2.3E-114 T 12-10-2018 JDM601_1527 804ed7bfe7007a39e7b83fecc4c3a0a2 1718 Gene3D G3DSA:3.40.366.20 467 866 2.3E-114 T 12-10-2018 JDM601_1527 804ed7bfe7007a39e7b83fecc4c3a0a2 1718 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 553 847 1.2E-78 T 12-10-2018 IPR020801 Polyketide synthase, acyl transferase domain JDM601_1527 804ed7bfe7007a39e7b83fecc4c3a0a2 1718 SMART SM00825 Beta-ketoacyl synthase 20 446 8.4E-184 T 12-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain JDM601_1527 804ed7bfe7007a39e7b83fecc4c3a0a2 1718 Gene3D G3DSA:1.10.1200.10 1634 1718 3.0E-19 T 12-10-2018 IPR036736 ACP-like superfamily JDM601_1527 804ed7bfe7007a39e7b83fecc4c3a0a2 1718 Pfam PF14765 Polyketide synthase dehydratase 910 1174 4.1E-22 T 12-10-2018 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 JDM601_1527 804ed7bfe7007a39e7b83fecc4c3a0a2 1718 Pfam PF00550 Phosphopantetheine attachment site 1648 1710 1.8E-13 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain JDM601_1527 804ed7bfe7007a39e7b83fecc4c3a0a2 1718 SMART SM00823 Phosphopantetheine attachment site 1646 1717 3.4E-20 T 12-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 JDM601_1527 804ed7bfe7007a39e7b83fecc4c3a0a2 1718 SUPERFAMILY SSF55048 672 735 1.01E-8 T 12-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding JDM601_1527 804ed7bfe7007a39e7b83fecc4c3a0a2 1718 Gene3D G3DSA:3.10.129.110 905 1178 3.7E-30 T 12-10-2018 JDM601_1527 804ed7bfe7007a39e7b83fecc4c3a0a2 1718 SUPERFAMILY SSF51735 1363 1600 3.73E-34 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_1527 804ed7bfe7007a39e7b83fecc4c3a0a2 1718 SMART SM01294 1647 1713 0.0011 T 12-10-2018 JDM601_1527 804ed7bfe7007a39e7b83fecc4c3a0a2 1718 SUPERFAMILY SSF52151 551 834 1.02E-53 T 12-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase JDM601_1527 804ed7bfe7007a39e7b83fecc4c3a0a2 1718 SMART SM00826 910 1061 1.8E-5 T 12-10-2018 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 JDM601_1527 804ed7bfe7007a39e7b83fecc4c3a0a2 1718 SUPERFAMILY SSF47336 1642 1717 2.62E-15 T 12-10-2018 IPR036736 ACP-like superfamily JDM601_1527 804ed7bfe7007a39e7b83fecc4c3a0a2 1718 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 1369 1557 1.4E-39 T 12-10-2018 JDM601_1527 804ed7bfe7007a39e7b83fecc4c3a0a2 1718 Pfam PF00698 Acyl transferase domain 551 857 4.4E-74 T 12-10-2018 IPR014043 Acyl transferase JDM601_1527 804ed7bfe7007a39e7b83fecc4c3a0a2 1718 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1672 1687 - T 12-10-2018 IPR006162 Phosphopantetheine attachment site JDM601_1527 804ed7bfe7007a39e7b83fecc4c3a0a2 1718 Gene3D G3DSA:3.40.50.720 1180 1629 2.5E-91 T 12-10-2018 JDM601_1527 804ed7bfe7007a39e7b83fecc4c3a0a2 1718 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 275 392 1.4E-39 T 12-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal JDM601_1527 804ed7bfe7007a39e7b83fecc4c3a0a2 1718 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 398 506 9.7E-12 T 12-10-2018 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 JDM601_1527 804ed7bfe7007a39e7b83fecc4c3a0a2 1718 SUPERFAMILY SSF53901 16 442 2.18E-92 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 JDM601_1527 804ed7bfe7007a39e7b83fecc4c3a0a2 1718 Gene3D G3DSA:3.40.47.10 9 459 2.9E-172 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 JDM601_1527 804ed7bfe7007a39e7b83fecc4c3a0a2 1718 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 180 196 - T 12-10-2018 IPR018201 Beta-ketoacyl synthase, active site JDM601_1527 804ed7bfe7007a39e7b83fecc4c3a0a2 1718 Pfam PF08659 KR domain 1369 1555 7.9E-52 T 12-10-2018 IPR013968 Polyketide synthase, ketoreductase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 JDM601_3441 16f52a0ac27bae9e86a6a65e3fa5e8cb 272 Gene3D G3DSA:3.40.50.720 1 271 5.3E-80 T 12-10-2018 JDM601_3441 16f52a0ac27bae9e86a6a65e3fa5e8cb 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 9.8E-43 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3441 16f52a0ac27bae9e86a6a65e3fa5e8cb 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 9.8E-43 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3441 16f52a0ac27bae9e86a6a65e3fa5e8cb 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 222 242 9.8E-43 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3441 16f52a0ac27bae9e86a6a65e3fa5e8cb 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 9.8E-43 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3441 16f52a0ac27bae9e86a6a65e3fa5e8cb 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 9.8E-43 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3441 16f52a0ac27bae9e86a6a65e3fa5e8cb 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 9.8E-43 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3441 16f52a0ac27bae9e86a6a65e3fa5e8cb 272 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 257 1.8E-64 T 12-10-2018 JDM601_3441 16f52a0ac27bae9e86a6a65e3fa5e8cb 272 SUPERFAMILY SSF51735 7 259 2.42E-79 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_3441 16f52a0ac27bae9e86a6a65e3fa5e8cb 272 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 5.7E-14 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3441 16f52a0ac27bae9e86a6a65e3fa5e8cb 272 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 5.7E-14 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3441 16f52a0ac27bae9e86a6a65e3fa5e8cb 272 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 5.7E-14 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_1519 0382c9728a00a6a22907a301dfde1165 559 SUPERFAMILY SSF55124 296 427 1.31E-17 T 12-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 JDM601_1519 0382c9728a00a6a22907a301dfde1165 559 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 465 481 - T 12-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 JDM601_1519 0382c9728a00a6a22907a301dfde1165 559 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 341 404 1.4E-11 T 12-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 JDM601_1519 0382c9728a00a6a22907a301dfde1165 559 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 96 156 9.8E-13 T 12-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 JDM601_1519 0382c9728a00a6a22907a301dfde1165 559 SUPERFAMILY SSF56014 166 323 1.44E-45 T 12-10-2018 JDM601_1519 0382c9728a00a6a22907a301dfde1165 559 SUPERFAMILY SSF56014 412 559 1.15E-35 T 12-10-2018 JDM601_1519 0382c9728a00a6a22907a301dfde1165 559 Gene3D G3DSA:3.30.413.10 158 334 1.8E-121 T 12-10-2018 JDM601_1519 0382c9728a00a6a22907a301dfde1165 559 Gene3D G3DSA:3.30.413.10 413 559 3.1E-43 T 12-10-2018 JDM601_1519 0382c9728a00a6a22907a301dfde1165 559 PRINTS PR00397 Sirohaem Fe-binding site signature 416 434 2.6E-9 T 12-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 JDM601_1519 0382c9728a00a6a22907a301dfde1165 559 PRINTS PR00397 Sirohaem Fe-binding site signature 465 483 2.6E-9 T 12-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 JDM601_1519 0382c9728a00a6a22907a301dfde1165 559 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 166 319 2.1E-37 T 12-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 JDM601_1519 0382c9728a00a6a22907a301dfde1165 559 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 416 552 3.1E-10 T 12-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 JDM601_1519 0382c9728a00a6a22907a301dfde1165 559 Gene3D G3DSA:3.90.480.20 28 401 1.8E-121 T 12-10-2018 JDM601_1519 0382c9728a00a6a22907a301dfde1165 559 SUPERFAMILY SSF55124 15 165 3.93E-35 T 12-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 JDM601_2703 ba7c30d7c5bccc67efc7b54a1d383d4f 316 Gene3D G3DSA:3.40.50.720 32 310 9.4E-90 T 12-10-2018 JDM601_2703 ba7c30d7c5bccc67efc7b54a1d383d4f 316 SUPERFAMILY SSF51735 95 273 3.75E-51 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_2703 ba7c30d7c5bccc67efc7b54a1d383d4f 316 SUPERFAMILY SSF52283 28 124 1.64E-8 T 12-10-2018 JDM601_2703 ba7c30d7c5bccc67efc7b54a1d383d4f 316 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 28 304 4.8E-6 T 12-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 JDM601_2703 ba7c30d7c5bccc67efc7b54a1d383d4f 316 Gene3D G3DSA:3.40.50.720 94 279 9.4E-90 T 12-10-2018 JDM601_2703 ba7c30d7c5bccc67efc7b54a1d383d4f 316 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 103 272 8.8E-51 T 12-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 JDM601_2703 ba7c30d7c5bccc67efc7b54a1d383d4f 316 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 212 228 - T 12-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site JDM601_3991 7abfe2988d585b40ef9f7628e0c5e55b 421 Gene3D G3DSA:3.30.2130.10 248 421 2.6E-67 T 12-10-2018 JDM601_3991 7abfe2988d585b40ef9f7628e0c5e55b 421 Pfam PF13840 ACT domain 343 403 1.9E-15 T 12-10-2018 IPR027795 CASTOR, ACT domain JDM601_3991 7abfe2988d585b40ef9f7628e0c5e55b 421 PIRSF PIRSF000726 1 62 9.7E-22 T 12-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 JDM601_3991 7abfe2988d585b40ef9f7628e0c5e55b 421 PIRSF PIRSF000726 56 414 1.2E-132 T 12-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 JDM601_3991 7abfe2988d585b40ef9f7628e0c5e55b 421 Pfam PF00696 Amino acid kinase family 3 231 6.5E-52 T 12-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 JDM601_3991 7abfe2988d585b40ef9f7628e0c5e55b 421 Gene3D G3DSA:3.40.1160.10 1 247 1.2E-88 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily JDM601_3991 7abfe2988d585b40ef9f7628e0c5e55b 421 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 2 406 3.5E-121 T 12-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 JDM601_3991 7abfe2988d585b40ef9f7628e0c5e55b 421 SUPERFAMILY SSF53633 4 243 6.94E-71 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily JDM601_3991 7abfe2988d585b40ef9f7628e0c5e55b 421 SUPERFAMILY SSF55021 250 329 6.03E-19 T 12-10-2018 JDM601_3991 7abfe2988d585b40ef9f7628e0c5e55b 421 SUPERFAMILY SSF55021 333 409 8.33E-25 T 12-10-2018 JDM601_3991 7abfe2988d585b40ef9f7628e0c5e55b 421 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 64 405 1.5E-119 T 12-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 JDM601_3991 7abfe2988d585b40ef9f7628e0c5e55b 421 ProSitePatterns PS00324 Aspartokinase signature. 5 13 - T 12-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 JDM601_3991 7abfe2988d585b40ef9f7628e0c5e55b 421 Pfam PF01842 ACT domain 269 329 5.7E-10 T 12-10-2018 IPR002912 ACT domain JDM601_3076 6c659eb4edbe7c098e1c50612f7b4b9d 158 Gene3D G3DSA:3.40.50.180 2 115 8.0E-20 T 12-10-2018 IPR035909 Methylesterase CheB, C-terminal JDM601_3076 6c659eb4edbe7c098e1c50612f7b4b9d 158 SUPERFAMILY SSF52738 6 142 1.26E-21 T 12-10-2018 IPR035909 Methylesterase CheB, C-terminal JDM601_3076 6c659eb4edbe7c098e1c50612f7b4b9d 158 Pfam PF01339 CheB methylesterase 11 113 4.5E-13 T 12-10-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 JDM601_2446 c2bdb17805dd35da99f04ae1dc615113 116 SUPERFAMILY SSF56399 5 112 1.35E-29 T 12-10-2018 JDM601_2446 c2bdb17805dd35da99f04ae1dc615113 116 Gene3D G3DSA:3.20.170.20 4 115 1.4E-35 T 12-10-2018 JDM601_2446 c2bdb17805dd35da99f04ae1dc615113 116 Pfam PF06108 Protein of unknown function (DUF952) 11 101 2.1E-29 T 12-10-2018 IPR009297 Protein of unknown function DUF952 JDM601_0770 81f6e47ec69e4ee36c6cf4f5980318dd 275 Pfam PF13683 Integrase core domain 199 259 7.9E-24 T 12-10-2018 IPR001584 Integrase, catalytic core GO:0015074 JDM601_0770 81f6e47ec69e4ee36c6cf4f5980318dd 275 Pfam PF13276 HTH-like domain 37 92 4.0E-12 T 12-10-2018 IPR025948 HTH-like domain JDM601_0770 81f6e47ec69e4ee36c6cf4f5980318dd 275 SUPERFAMILY SSF53098 106 270 2.28E-37 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily JDM601_0770 81f6e47ec69e4ee36c6cf4f5980318dd 275 Gene3D G3DSA:3.30.420.10 105 264 2.5E-15 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 JDM601_3769 81f6e47ec69e4ee36c6cf4f5980318dd 275 Pfam PF13683 Integrase core domain 199 259 7.9E-24 T 12-10-2018 IPR001584 Integrase, catalytic core GO:0015074 JDM601_3769 81f6e47ec69e4ee36c6cf4f5980318dd 275 Pfam PF13276 HTH-like domain 37 92 4.0E-12 T 12-10-2018 IPR025948 HTH-like domain JDM601_3769 81f6e47ec69e4ee36c6cf4f5980318dd 275 SUPERFAMILY SSF53098 106 270 2.28E-37 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily JDM601_3769 81f6e47ec69e4ee36c6cf4f5980318dd 275 Gene3D G3DSA:3.30.420.10 105 264 2.5E-15 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 JDM601_1316 81f6e47ec69e4ee36c6cf4f5980318dd 275 Pfam PF13683 Integrase core domain 199 259 7.9E-24 T 12-10-2018 IPR001584 Integrase, catalytic core GO:0015074 JDM601_1316 81f6e47ec69e4ee36c6cf4f5980318dd 275 Pfam PF13276 HTH-like domain 37 92 4.0E-12 T 12-10-2018 IPR025948 HTH-like domain JDM601_1316 81f6e47ec69e4ee36c6cf4f5980318dd 275 SUPERFAMILY SSF53098 106 270 2.28E-37 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily JDM601_1316 81f6e47ec69e4ee36c6cf4f5980318dd 275 Gene3D G3DSA:3.30.420.10 105 264 2.5E-15 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 JDM601_1370 81f6e47ec69e4ee36c6cf4f5980318dd 275 Pfam PF13683 Integrase core domain 199 259 7.9E-24 T 12-10-2018 IPR001584 Integrase, catalytic core GO:0015074 JDM601_1370 81f6e47ec69e4ee36c6cf4f5980318dd 275 Pfam PF13276 HTH-like domain 37 92 4.0E-12 T 12-10-2018 IPR025948 HTH-like domain JDM601_1370 81f6e47ec69e4ee36c6cf4f5980318dd 275 SUPERFAMILY SSF53098 106 270 2.28E-37 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily JDM601_1370 81f6e47ec69e4ee36c6cf4f5980318dd 275 Gene3D G3DSA:3.30.420.10 105 264 2.5E-15 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 JDM601_4254 4594f705683e84a3676a41604f8ca414 412 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 9 243 1.7E-40 T 12-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 JDM601_4254 4594f705683e84a3676a41604f8ca414 412 SUPERFAMILY SSF51395 9 384 2.41E-84 T 12-10-2018 JDM601_4254 4594f705683e84a3676a41604f8ca414 412 Gene3D G3DSA:3.20.20.70 6 400 7.3E-89 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JDM601_4283 5c32f9bf2a50ac57e0f0b8d01a5423b9 360 TIGRFAM TIGR00996 Mtu_fam_mce: virulence factor Mce family protein 12 292 7.7E-59 T 12-10-2018 IPR005693 Virulence factor Mce protein JDM601_4283 5c32f9bf2a50ac57e0f0b8d01a5423b9 360 PRINTS PR01782 Mycobacterial cell entry (MCE) protein signature 91 107 1.5E-6 T 12-10-2018 IPR005693 Virulence factor Mce protein JDM601_4283 5c32f9bf2a50ac57e0f0b8d01a5423b9 360 PRINTS PR01782 Mycobacterial cell entry (MCE) protein signature 129 153 1.5E-6 T 12-10-2018 IPR005693 Virulence factor Mce protein JDM601_4283 5c32f9bf2a50ac57e0f0b8d01a5423b9 360 PRINTS PR01782 Mycobacterial cell entry (MCE) protein signature 178 196 1.5E-6 T 12-10-2018 IPR005693 Virulence factor Mce protein JDM601_4283 5c32f9bf2a50ac57e0f0b8d01a5423b9 360 PRINTS PR01782 Mycobacterial cell entry (MCE) protein signature 298 317 1.5E-6 T 12-10-2018 IPR005693 Virulence factor Mce protein JDM601_4283 5c32f9bf2a50ac57e0f0b8d01a5423b9 360 Pfam PF02470 MlaD protein 40 113 3.2E-14 T 12-10-2018 IPR003399 Mce/MlaD JDM601_2333 5032357feee4e7b7d5550174459041c5 368 Gene3D G3DSA:1.20.1090.10 175 362 1.6E-68 T 12-10-2018 JDM601_2333 5032357feee4e7b7d5550174459041c5 368 Pfam PF01761 3-dehydroquinate synthase 69 326 1.2E-94 T 12-10-2018 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 JDM601_2333 5032357feee4e7b7d5550174459041c5 368 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 7 361 63.825 T 12-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 JDM601_2333 5032357feee4e7b7d5550174459041c5 368 SUPERFAMILY SSF56796 11 356 4.97E-103 T 12-10-2018 JDM601_2333 5032357feee4e7b7d5550174459041c5 368 PIRSF PIRSF001455 7 351 6.7E-100 T 12-10-2018 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 JDM601_2333 5032357feee4e7b7d5550174459041c5 368 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 18 341 4.6E-107 T 12-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 JDM601_2333 5032357feee4e7b7d5550174459041c5 368 Gene3D G3DSA:3.40.50.1970 1 174 9.9E-61 T 12-10-2018 JDM601_0920 688f07dc0eb74297c1bd88f3b82aa804 116 TIGRFAM TIGR01300 CPA3_mnhG_phaG: monovalent cation/proton antiporter, MnhG/PhaG subunit 13 103 7.1E-19 T 12-10-2018 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:1902600 JDM601_0920 688f07dc0eb74297c1bd88f3b82aa804 116 Pfam PF03334 Na+/H+ antiporter subunit 13 90 1.1E-21 T 12-10-2018 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:1902600 JDM601_3432 dcbb721d325cac34a0e6e854b5253e6d 355 Pfam PF01636 Phosphotransferase enzyme family 98 281 4.1E-11 T 12-10-2018 IPR002575 Aminoglycoside phosphotransferase JDM601_3432 dcbb721d325cac34a0e6e854b5253e6d 355 SMART SM00587 114 287 4.4E-4 T 12-10-2018 IPR015897 CHK kinase-like JDM601_3432 dcbb721d325cac34a0e6e854b5253e6d 355 SUPERFAMILY SSF56112 7 315 1.11E-33 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily JDM601_3432 dcbb721d325cac34a0e6e854b5253e6d 355 Gene3D G3DSA:3.90.1200.10 202 315 3.8E-9 T 12-10-2018 JDM601_4204 e641faa43dcc8c705bd9baf5aa6cf083 209 Gene3D G3DSA:1.10.357.10 14 195 2.0E-20 T 12-10-2018 JDM601_4204 e641faa43dcc8c705bd9baf5aa6cf083 209 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 21 34 9.0E-7 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_4204 e641faa43dcc8c705bd9baf5aa6cf083 209 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 41 64 9.0E-7 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_4204 e641faa43dcc8c705bd9baf5aa6cf083 209 Pfam PF00440 Bacterial regulatory proteins, tetR family 21 65 4.5E-12 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_4204 e641faa43dcc8c705bd9baf5aa6cf083 209 SUPERFAMILY SSF46689 13 90 1.46E-14 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JDM601_2871 7822b250dbebb96b2d4aad78418a9875 505 TIGRFAM TIGR01972 NDH_I_M: proton-translocating NADH-quinone oxidoreductase, chain M 2 489 1.2E-156 T 12-10-2018 IPR010227 NADH-quinone oxidoreductase, chain M/4 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 JDM601_2871 7822b250dbebb96b2d4aad78418a9875 505 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 241 265 7.8E-32 T 12-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 JDM601_2871 7822b250dbebb96b2d4aad78418a9875 505 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 128 147 7.8E-32 T 12-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 JDM601_2871 7822b250dbebb96b2d4aad78418a9875 505 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 159 183 7.8E-32 T 12-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 JDM601_2871 7822b250dbebb96b2d4aad78418a9875 505 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 382 408 7.8E-32 T 12-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 JDM601_2871 7822b250dbebb96b2d4aad78418a9875 505 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 329 348 7.8E-32 T 12-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 JDM601_2871 7822b250dbebb96b2d4aad78418a9875 505 Pfam PF00361 Proton-conducting membrane transporter 122 424 1.0E-65 T 12-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 JDM601_0601 7c5f3e1946d68485d07089fb2a8c477d 744 Pfam PF13245 AAA domain 259 525 1.4E-12 T 12-10-2018 JDM601_0601 7c5f3e1946d68485d07089fb2a8c477d 744 Gene3D G3DSA:3.40.50.300 546 744 9.5E-32 T 12-10-2018 JDM601_0601 7c5f3e1946d68485d07089fb2a8c477d 744 Pfam PF13361 UvrD-like helicase C-terminal domain 661 726 2.2E-13 T 12-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 JDM601_0601 7c5f3e1946d68485d07089fb2a8c477d 744 SUPERFAMILY SSF52540 252 729 5.63E-60 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_1150 22a9f09a3f91862afabb2e166b3331ab 533 TIGRFAM TIGR01660 narH: nitrate reductase, beta subunit 2 477 5.4E-228 T 12-10-2018 IPR006547 Nitrate reductase, beta subunit GO:0008940|GO:0009325|GO:0042126|GO:0055114 KEGG: 00910+1.7.5.1|MetaCyc: PWY-6748 JDM601_1150 22a9f09a3f91862afabb2e166b3331ab 533 Gene3D G3DSA:1.10.3650.10 354 433 2.5E-22 T 12-10-2018 IPR038262 Nitrate reductase beta, C-terminal domain superfamily KEGG: 00910+1.7.5.1|MetaCyc: PWY-6748 JDM601_1150 22a9f09a3f91862afabb2e166b3331ab 533 Gene3D G3DSA:3.30.70.20 1 296 3.1E-96 T 12-10-2018 JDM601_1150 22a9f09a3f91862afabb2e166b3331ab 533 Pfam PF14711 Respiratory nitrate reductase beta C-terminal 354 435 1.4E-27 T 12-10-2018 IPR029263 Respiratory nitrate reductase beta, C-terminal KEGG: 00910+1.7.5.1|MetaCyc: PWY-6748 JDM601_1150 22a9f09a3f91862afabb2e166b3331ab 533 SUPERFAMILY SSF54862 1 466 2.51E-155 T 12-10-2018 JDM601_1150 22a9f09a3f91862afabb2e166b3331ab 533 Pfam PF13247 4Fe-4S dicluster domain 171 266 4.0E-36 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain JDM601_3570 0865085335224d7e2d17e85aa262105c 420 SUPERFAMILY SSF53187 4 417 2.56E-95 T 12-10-2018 JDM601_3570 0865085335224d7e2d17e85aa262105c 420 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 252 270 6.4E-41 T 12-10-2018 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 JDM601_3570 0865085335224d7e2d17e85aa262105c 420 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 73 89 6.4E-41 T 12-10-2018 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 JDM601_3570 0865085335224d7e2d17e85aa262105c 420 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 106 126 6.4E-41 T 12-10-2018 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 JDM601_3570 0865085335224d7e2d17e85aa262105c 420 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 384 399 6.4E-41 T 12-10-2018 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 JDM601_3570 0865085335224d7e2d17e85aa262105c 420 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 295 311 6.4E-41 T 12-10-2018 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 JDM601_3570 0865085335224d7e2d17e85aa262105c 420 Hamap MF_00467 Probable M18 family aminopeptidase 2 [apeB]. 1 419 53.8 T 12-10-2018 IPR022984 M18 family aminopeptidase 2, putative GO:0004177 JDM601_3570 0865085335224d7e2d17e85aa262105c 420 Gene3D G3DSA:2.30.250.10 83 204 3.7E-142 T 12-10-2018 IPR023358 Peptidase M18, domain 2 GO:0004177 JDM601_3570 0865085335224d7e2d17e85aa262105c 420 Pfam PF02127 Aminopeptidase I zinc metalloprotease (M18) 11 416 1.8E-139 T 12-10-2018 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 JDM601_3570 0865085335224d7e2d17e85aa262105c 420 Gene3D G3DSA:3.40.630.10 8 416 3.7E-142 T 12-10-2018 JDM601_3570 0865085335224d7e2d17e85aa262105c 420 SUPERFAMILY SSF101821 85 199 2.29E-25 T 12-10-2018 JDM601_2994 355571a713749fd3701cffa72b666e82 131 Gene3D G3DSA:3.10.129.10 2 128 4.6E-28 T 12-10-2018 JDM601_2994 355571a713749fd3701cffa72b666e82 131 SUPERFAMILY SSF54637 10 130 6.46E-28 T 12-10-2018 IPR029069 HotDog domain superfamily JDM601_2994 355571a713749fd3701cffa72b666e82 131 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 10 121 3.4E-19 T 12-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 JDM601_2994 355571a713749fd3701cffa72b666e82 131 Pfam PF03061 Thioesterase superfamily 45 116 2.4E-14 T 12-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 JDM601_4328 ede73fac51c468fa7e35726df821953b 257 TIGRFAM TIGR03083 TIGR03083: uncharacterized Actinobacterial protein TIGR03083 11 224 1.4E-50 T 12-10-2018 IPR017517 Conserved hypothetical protein CHP03083, actinobacterial-type JDM601_4328 ede73fac51c468fa7e35726df821953b 257 Pfam PF11716 Mycothiol maleylpyruvate isomerase N-terminal domain 12 147 3.0E-30 T 12-10-2018 IPR024344 Mycothiol-dependent maleylpyruvate isomerase, metal-binding domain GO:0046872 JDM601_4328 ede73fac51c468fa7e35726df821953b 257 Pfam PF08608 Wyosine base formation 183 234 5.4E-8 T 12-10-2018 IPR013917 tRNA wybutosine-synthesis MetaCyc: PWY-7285|MetaCyc: PWY-7286 JDM601_4328 ede73fac51c468fa7e35726df821953b 257 TIGRFAM TIGR03084 TIGR03084: TIGR03084 family protein 7 257 1.1E-112 T 12-10-2018 IPR017518 Conserved hypothetical protein CHP03084 JDM601_4328 ede73fac51c468fa7e35726df821953b 257 SUPERFAMILY SSF109854 1 152 1.68E-36 T 12-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes JDM601_4328 ede73fac51c468fa7e35726df821953b 257 Gene3D G3DSA:1.20.120.450 3 150 3.0E-17 T 12-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes JDM601_4066 fe119f267f4d9e1559a0300893071ccb 78 Pfam PF04255 Protein of unknown function (DUF433) 8 63 5.9E-22 T 12-10-2018 IPR007367 Protein of unknown function DUF433 JDM601_4066 fe119f267f4d9e1559a0300893071ccb 78 SUPERFAMILY SSF46689 3 72 1.16E-20 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JDM601_4066 fe119f267f4d9e1559a0300893071ccb 78 Gene3D G3DSA:1.10.10.10 7 75 1.3E-17 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JDM601_0573 4587f08d93e868dc73c04cccaa524a80 211 SUPERFAMILY SSF48403 51 96 8.53E-7 T 12-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily JDM601_0573 4587f08d93e868dc73c04cccaa524a80 211 Gene3D G3DSA:1.25.40.20 9 103 3.2E-8 T 12-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily JDM601_0573 4587f08d93e868dc73c04cccaa524a80 211 Pfam PF13857 Ankyrin repeats (many copies) 51 93 1.7E-9 T 12-10-2018 JDM601_3349 bb69f88c96527f3853d66aa840c3ed2d 105 TIGRFAM TIGR03967 mycofact_MftB: putative mycofactocin binding protein MftB 17 96 3.0E-28 T 12-10-2018 IPR023850 Putative mycofactocin binding protein MftB JDM601_0477 6965f80ed7f9c6bee90912d6156609ce 249 SMART SM00855 6 190 7.6E-22 T 12-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 JDM601_0477 6965f80ed7f9c6bee90912d6156609ce 249 Gene3D G3DSA:3.40.50.1240 1 244 2.1E-80 T 12-10-2018 IPR029033 Histidine phosphatase superfamily JDM601_0477 6965f80ed7f9c6bee90912d6156609ce 249 Hamap MF_01039 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [gpmA]. 4 231 41.189 T 12-10-2018 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484 JDM601_0477 6965f80ed7f9c6bee90912d6156609ce 249 PIRSF PIRSF000709 3 214 4.0E-10 T 12-10-2018 JDM601_0477 6965f80ed7f9c6bee90912d6156609ce 249 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 7 205 1.4E-30 T 12-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 JDM601_0477 6965f80ed7f9c6bee90912d6156609ce 249 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 9 18 - T 12-10-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824 JDM601_0477 6965f80ed7f9c6bee90912d6156609ce 249 TIGRFAM TIGR01258 pgm_1: phosphoglycerate mutase 1 family 6 247 6.2E-111 T 12-10-2018 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484 JDM601_0477 6965f80ed7f9c6bee90912d6156609ce 249 SUPERFAMILY SSF53254 5 221 1.26E-68 T 12-10-2018 IPR029033 Histidine phosphatase superfamily JDM601_2537 2648ad5cfeac9f1caf3bc4b54b973753 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 10 88 5.0E-25 T 12-10-2018 JDM601_2537 2648ad5cfeac9f1caf3bc4b54b973753 89 Gene3D G3DSA:1.10.287.10 2 89 1.9E-34 T 12-10-2018 JDM601_2537 2648ad5cfeac9f1caf3bc4b54b973753 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 22.585 T 12-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JDM601_2537 2648ad5cfeac9f1caf3bc4b54b973753 89 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 12-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JDM601_2537 2648ad5cfeac9f1caf3bc4b54b973753 89 SMART SM01387 8 88 1.4E-50 T 12-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JDM601_2537 2648ad5cfeac9f1caf3bc4b54b973753 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 5 89 4.1E-40 T 12-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JDM601_2537 2648ad5cfeac9f1caf3bc4b54b973753 89 SUPERFAMILY SSF47060 3 89 2.8E-35 T 12-10-2018 IPR009068 S15/NS1, RNA-binding JDM601_2537 2648ad5cfeac9f1caf3bc4b54b973753 89 Pfam PF00312 Ribosomal protein S15 8 88 3.8E-37 T 12-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JDM601_0342 72302433f4bed497fb28f8cf571f6541 300 Pfam PF01263 Aldose 1-epimerase 36 273 1.9E-22 T 12-10-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 JDM601_0342 72302433f4bed497fb28f8cf571f6541 300 Gene3D G3DSA:2.70.98.10 2 297 8.5E-49 T 12-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 JDM601_0342 72302433f4bed497fb28f8cf571f6541 300 SUPERFAMILY SSF74650 15 290 1.82E-39 T 12-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 JDM601_2713 52e74e6585cf5395fd8f0bd3204d966c 192 ProSitePatterns PS00083 Intradiol ring-cleavage dioxygenases signature. 33 61 - T 12-10-2018 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 JDM601_2713 52e74e6585cf5395fd8f0bd3204d966c 192 SUPERFAMILY SSF49482 2 189 3.4E-68 T 12-10-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 JDM601_2713 52e74e6585cf5395fd8f0bd3204d966c 192 Gene3D G3DSA:2.60.130.10 1 191 3.0E-77 T 12-10-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 JDM601_2713 52e74e6585cf5395fd8f0bd3204d966c 192 TIGRFAM TIGR02422 protocat_beta: protocatechuate 3,4-dioxygenase, beta subunit 2 190 4.6E-100 T 12-10-2018 IPR012785 Protocatechuate 3,4-dioxygenase, beta subunit GO:0005506|GO:0018578|GO:0019619|GO:0055114 KEGG: 00362+1.13.11.3|KEGG: 00624+1.13.11.3|MetaCyc: PWY-6041 JDM601_2713 52e74e6585cf5395fd8f0bd3204d966c 192 Pfam PF00775 Dioxygenase 1 181 3.3E-57 T 12-10-2018 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 JDM601_2185 26dffe524042b3e003608a06a4476804 212 TIGRFAM TIGR00077 lspA: signal peptidase II 29 170 7.7E-27 T 12-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 JDM601_2185 26dffe524042b3e003608a06a4476804 212 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 24 176 15.278 T 12-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 JDM601_2185 26dffe524042b3e003608a06a4476804 212 ProSitePatterns PS00855 Signal peptidases II signature. 116 128 - T 12-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 JDM601_2185 26dffe524042b3e003608a06a4476804 212 Pfam PF01252 Signal peptidase (SPase) II 33 170 3.7E-30 T 12-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 JDM601_2185 26dffe524042b3e003608a06a4476804 212 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 71 79 5.1E-16 T 12-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 JDM601_2185 26dffe524042b3e003608a06a4476804 212 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 113 128 5.1E-16 T 12-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 JDM601_2185 26dffe524042b3e003608a06a4476804 212 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 151 167 5.1E-16 T 12-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 JDM601_1545 a1b86a29b224453d74d932fbf77f18fe 76 SUPERFAMILY SSF160582 3 73 1.83E-29 T 12-10-2018 IPR038020 MbtH-like domain superfamily JDM601_1545 a1b86a29b224453d74d932fbf77f18fe 76 Pfam PF03621 MbtH-like protein 2 57 1.3E-27 T 12-10-2018 IPR005153 MbtH-like domain JDM601_1545 a1b86a29b224453d74d932fbf77f18fe 76 SMART SM00923 4 57 1.3E-31 T 12-10-2018 IPR005153 MbtH-like domain JDM601_1545 a1b86a29b224453d74d932fbf77f18fe 76 Gene3D G3DSA:3.90.820.10 1 76 6.8E-37 T 12-10-2018 JDM601_4326 6046b4c2d12dde71129d0d65abfc83f7 204 Pfam PF02622 Uncharacterized ACR, COG1678 33 187 3.9E-35 T 12-10-2018 IPR003774 Protein of unknown function UPF0301 JDM601_4326 6046b4c2d12dde71129d0d65abfc83f7 204 Gene3D G3DSA:3.40.1740.10 9 195 3.3E-59 T 12-10-2018 JDM601_4326 6046b4c2d12dde71129d0d65abfc83f7 204 Hamap MF_00758 UPF0301 protein YqgE [yqgE]. 20 201 25.678 T 12-10-2018 IPR003774 Protein of unknown function UPF0301 JDM601_4326 6046b4c2d12dde71129d0d65abfc83f7 204 SUPERFAMILY SSF143456 18 198 6.02E-44 T 12-10-2018 JDM601_4281 e551f719e377c69fdf0f3c20e784c82e 325 TIGRFAM TIGR00996 Mtu_fam_mce: virulence factor Mce family protein 5 227 5.3E-51 T 12-10-2018 IPR005693 Virulence factor Mce protein JDM601_4281 e551f719e377c69fdf0f3c20e784c82e 325 Pfam PF11887 Cholesterol uptake porter CUP1 of Mce4, putative 95 220 2.9E-12 T 12-10-2018 IPR024516 Mammalian cell entry, C-terminal JDM601_2239 c2c4302666b6fda759ee1d20e937124c 940 Pfam PF00694 Aconitase C-terminal domain 728 862 2.0E-41 T 12-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 JDM601_2239 c2c4302666b6fda759ee1d20e937124c 940 Pfam PF00330 Aconitase family (aconitate hydratase) 75 599 1.3E-175 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 JDM601_2239 c2c4302666b6fda759ee1d20e937124c 940 Gene3D G3DSA:3.30.499.20 10 367 3.5E-158 T 12-10-2018 JDM601_2239 c2c4302666b6fda759ee1d20e937124c 940 ProSitePatterns PS01244 Aconitase family signature 2. 530 543 - T 12-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 JDM601_2239 c2c4302666b6fda759ee1d20e937124c 940 PRINTS PR00415 Aconitase family signature 367 381 3.3E-40 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 JDM601_2239 c2c4302666b6fda759ee1d20e937124c 940 PRINTS PR00415 Aconitase family signature 530 543 3.3E-40 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 JDM601_2239 c2c4302666b6fda759ee1d20e937124c 940 PRINTS PR00415 Aconitase family signature 288 301 3.3E-40 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 JDM601_2239 c2c4302666b6fda759ee1d20e937124c 940 PRINTS PR00415 Aconitase family signature 169 177 3.3E-40 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 JDM601_2239 c2c4302666b6fda759ee1d20e937124c 940 PRINTS PR00415 Aconitase family signature 212 227 3.3E-40 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 JDM601_2239 c2c4302666b6fda759ee1d20e937124c 940 PRINTS PR00415 Aconitase family signature 145 158 3.3E-40 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 JDM601_2239 c2c4302666b6fda759ee1d20e937124c 940 PRINTS PR00415 Aconitase family signature 274 287 3.3E-40 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 JDM601_2239 c2c4302666b6fda759ee1d20e937124c 940 PRINTS PR00415 Aconitase family signature 198 211 3.3E-40 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 JDM601_2239 c2c4302666b6fda759ee1d20e937124c 940 PRINTS PR00415 Aconitase family signature 468 479 3.3E-40 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 JDM601_2239 c2c4302666b6fda759ee1d20e937124c 940 ProSitePatterns PS00450 Aconitase family signature 1. 464 480 - T 12-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 JDM601_2239 c2c4302666b6fda759ee1d20e937124c 940 Gene3D G3DSA:1.10.1440.20 628 688 1.4E-20 T 12-10-2018 JDM601_2239 c2c4302666b6fda759ee1d20e937124c 940 Gene3D G3DSA:3.20.19.10 691 938 1.4E-98 T 12-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 JDM601_2239 c2c4302666b6fda759ee1d20e937124c 940 SUPERFAMILY SSF53732 7 664 1.18E-222 T 12-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 JDM601_2239 c2c4302666b6fda759ee1d20e937124c 940 SUPERFAMILY SSF52016 668 937 1.65E-80 T 12-10-2018 JDM601_0756 2f0a493112ce15ea14c5236c5bb8c89c 926 SUPERFAMILY SSF53335 104 152 1.15E-5 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JDM601_0756 2f0a493112ce15ea14c5236c5bb8c89c 926 Pfam PF06634 Protein of unknown function (DUF1156) 13 82 6.8E-32 T 12-10-2018 IPR009537 Domain of unknown function DUF1156 JDM601_2251 4481f35bd38fc3f02d766ee0243c4767 425 TIGRFAM TIGR01979 sufS: cysteine desulfurase, SufS family 20 423 6.2E-171 T 12-10-2018 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 JDM601_2251 4481f35bd38fc3f02d766ee0243c4767 425 SUPERFAMILY SSF53383 17 420 4.13E-116 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase JDM601_2251 4481f35bd38fc3f02d766ee0243c4767 425 Pfam PF00266 Aminotransferase class-V 40 411 4.0E-138 T 12-10-2018 IPR000192 Aminotransferase class V domain JDM601_2251 4481f35bd38fc3f02d766ee0243c4767 425 Gene3D G3DSA:3.40.640.10 50 311 1.2E-160 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 JDM601_2251 4481f35bd38fc3f02d766ee0243c4767 425 Gene3D G3DSA:3.90.1150.10 21 414 1.2E-160 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 JDM601_2251 4481f35bd38fc3f02d766ee0243c4767 425 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 232 251 - T 12-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site JDM601_1050 8a79c10bef3783580470d8ec0585f58c 465 PRINTS PR00149 Fumarate lyase superfamily signature 267 294 9.3E-35 T 12-10-2018 IPR000362 Fumarate lyase family JDM601_1050 8a79c10bef3783580470d8ec0585f58c 465 PRINTS PR00149 Fumarate lyase superfamily signature 313 329 9.3E-35 T 12-10-2018 IPR000362 Fumarate lyase family JDM601_1050 8a79c10bef3783580470d8ec0585f58c 465 PRINTS PR00149 Fumarate lyase superfamily signature 175 193 9.3E-35 T 12-10-2018 IPR000362 Fumarate lyase family JDM601_1050 8a79c10bef3783580470d8ec0585f58c 465 PRINTS PR00149 Fumarate lyase superfamily signature 129 147 9.3E-35 T 12-10-2018 IPR000362 Fumarate lyase family JDM601_1050 8a79c10bef3783580470d8ec0585f58c 465 Pfam PF00206 Lyase 14 338 8.4E-102 T 12-10-2018 IPR022761 Fumarate lyase, N-terminal JDM601_1050 8a79c10bef3783580470d8ec0585f58c 465 Gene3D G3DSA:1.10.275.10 7 133 4.6E-53 T 12-10-2018 IPR024083 Fumarase/histidase, N-terminal JDM601_1050 8a79c10bef3783580470d8ec0585f58c 465 SUPERFAMILY SSF48557 6 461 2.04E-139 T 12-10-2018 IPR008948 L-Aspartase-like GO:0003824 JDM601_1050 8a79c10bef3783580470d8ec0585f58c 465 Pfam PF10415 Fumarase C C-terminus 404 460 2.4E-19 T 12-10-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 JDM601_1050 8a79c10bef3783580470d8ec0585f58c 465 ProSitePatterns PS00163 Fumarate lyases signature. 313 322 - T 12-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 JDM601_1050 8a79c10bef3783580470d8ec0585f58c 465 Hamap MF_00743 Fumarate hydratase class II [fumC]. 6 462 79.27 T 12-10-2018 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 JDM601_1050 8a79c10bef3783580470d8ec0585f58c 465 Gene3D G3DSA:1.20.200.10 134 403 5.1E-118 T 12-10-2018 JDM601_1050 8a79c10bef3783580470d8ec0585f58c 465 Gene3D G3DSA:1.10.40.30 404 459 5.8E-32 T 12-10-2018 JDM601_3390 4b18f1657bc7bd6b0895714d7d914ee7 537 Pfam PF13193 AMP-binding enzyme C-terminal domain 447 520 3.1E-14 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain JDM601_3390 4b18f1657bc7bd6b0895714d7d914ee7 537 Gene3D G3DSA:3.40.50.12780 4 431 6.5E-58 T 12-10-2018 JDM601_3390 4b18f1657bc7bd6b0895714d7d914ee7 537 Pfam PF00501 AMP-binding enzyme 13 437 2.1E-44 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 JDM601_3390 4b18f1657bc7bd6b0895714d7d914ee7 537 Gene3D G3DSA:3.30.300.30 434 535 9.6E-22 T 12-10-2018 JDM601_3390 4b18f1657bc7bd6b0895714d7d914ee7 537 SUPERFAMILY SSF56801 5 531 2.22E-86 T 12-10-2018 JDM601_3390 4b18f1657bc7bd6b0895714d7d914ee7 537 ProSitePatterns PS00455 Putative AMP-binding domain signature. 179 190 - T 12-10-2018 IPR020845 AMP-binding, conserved site JDM601_0390 510285af9128445177c9ded747a3c3a9 494 SUPERFAMILY SSF53187 42 472 2.57E-60 T 12-10-2018 JDM601_0390 510285af9128445177c9ded747a3c3a9 494 SUPERFAMILY SSF52025 125 225 9.81E-14 T 12-10-2018 JDM601_0390 510285af9128445177c9ded747a3c3a9 494 Gene3D G3DSA:3.40.630.10 69 459 9.1E-86 T 12-10-2018 JDM601_0390 510285af9128445177c9ded747a3c3a9 494 Gene3D G3DSA:3.50.30.30 108 236 9.1E-86 T 12-10-2018 JDM601_0390 510285af9128445177c9ded747a3c3a9 494 Pfam PF04389 Peptidase family M28 246 463 1.5E-47 T 12-10-2018 IPR007484 Peptidase M28 JDM601_0390 510285af9128445177c9ded747a3c3a9 494 Pfam PF02225 PA domain 134 223 4.8E-16 T 12-10-2018 IPR003137 PA domain JDM601_2992 769b90e4f62d811f8d5f5ee7cde64a5d 512 SMART SM00304 245 297 9.6E-10 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JDM601_2992 769b90e4f62d811f8d5f5ee7cde64a5d 512 SMART SM00044 293 482 4.1E-6 T 12-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 JDM601_2992 769b90e4f62d811f8d5f5ee7cde64a5d 512 Gene3D G3DSA:1.20.1480.50 195 301 8.9E-8 T 12-10-2018 JDM601_2992 769b90e4f62d811f8d5f5ee7cde64a5d 512 Gene3D G3DSA:3.30.70.1230 315 504 3.0E-40 T 12-10-2018 IPR029787 Nucleotide cyclase JDM601_2992 769b90e4f62d811f8d5f5ee7cde64a5d 512 Pfam PF00672 HAMP domain 245 293 2.0E-8 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JDM601_2992 769b90e4f62d811f8d5f5ee7cde64a5d 512 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 324 494 6.9E-19 T 12-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 JDM601_2992 769b90e4f62d811f8d5f5ee7cde64a5d 512 SUPERFAMILY SSF55073 321 498 6.12E-42 T 12-10-2018 IPR029787 Nucleotide cyclase JDM601_2992 769b90e4f62d811f8d5f5ee7cde64a5d 512 SUPERFAMILY SSF158472 245 294 1.31E-7 T 12-10-2018 JDM601_2375 bf7de3462d0b87b62368f264f5fc867b 99 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 1 81 4.4E-26 T 12-10-2018 IPR003849 Preprotein translocase YajC JDM601_2375 bf7de3462d0b87b62368f264f5fc867b 99 SMART SM01323 1 81 2.2E-23 T 12-10-2018 IPR003849 Preprotein translocase YajC JDM601_2375 bf7de3462d0b87b62368f264f5fc867b 99 Pfam PF02699 Preprotein translocase subunit 4 78 2.2E-17 T 12-10-2018 IPR003849 Preprotein translocase YajC JDM601_2375 bf7de3462d0b87b62368f264f5fc867b 99 PRINTS PR01853 Bacterial YajC preprotein translocase signature 1 20 2.2E-5 T 12-10-2018 IPR003849 Preprotein translocase YajC JDM601_2375 bf7de3462d0b87b62368f264f5fc867b 99 PRINTS PR01853 Bacterial YajC preprotein translocase signature 39 57 2.2E-5 T 12-10-2018 IPR003849 Preprotein translocase YajC JDM601_1480 5cd96839ddbf465647e1642459f09b1f 454 SMART SM00100 333 447 2.8E-9 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain JDM601_1480 5cd96839ddbf465647e1642459f09b1f 454 SUPERFAMILY SSF51206 339 449 1.31E-14 T 12-10-2018 IPR018490 Cyclic nucleotide-binding-like JDM601_1480 5cd96839ddbf465647e1642459f09b1f 454 Gene3D G3DSA:2.60.120.10 325 452 1.4E-14 T 12-10-2018 IPR014710 RmlC-like jelly roll fold JDM601_1480 5cd96839ddbf465647e1642459f09b1f 454 Pfam PF00027 Cyclic nucleotide-binding domain 352 433 3.7E-10 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain JDM601_1480 5cd96839ddbf465647e1642459f09b1f 454 PIRSF PIRSF026673 11 453 6.8E-111 T 12-10-2018 IPR016846 Predicted ion channel, cNMP-binding JDM601_1480 5cd96839ddbf465647e1642459f09b1f 454 Pfam PF00924 Mechanosensitive ion channel 116 309 4.2E-34 T 12-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 JDM601_1480 5cd96839ddbf465647e1642459f09b1f 454 SUPERFAMILY SSF50182 159 223 2.19E-11 T 12-10-2018 IPR010920 LSM domain superfamily JDM601_3927 1592fe86917b0900b26a13105b4f3271 253 SUPERFAMILY SSF46894 155 250 5.67E-29 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 JDM601_3927 1592fe86917b0900b26a13105b4f3271 253 Gene3D G3DSA:1.10.10.10 153 253 1.2E-33 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JDM601_3927 1592fe86917b0900b26a13105b4f3271 253 Pfam PF00486 Transcriptional regulatory protein, C terminal 177 249 1.6E-25 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 JDM601_3927 1592fe86917b0900b26a13105b4f3271 253 Pfam PF00072 Response regulator receiver domain 31 140 5.1E-27 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JDM601_3927 1592fe86917b0900b26a13105b4f3271 253 SMART SM00448 29 140 7.8E-42 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JDM601_3927 1592fe86917b0900b26a13105b4f3271 253 SMART SM00862 176 249 2.2E-26 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 JDM601_3927 1592fe86917b0900b26a13105b4f3271 253 Gene3D G3DSA:3.40.50.2300 20 149 8.0E-37 T 12-10-2018 JDM601_3927 1592fe86917b0900b26a13105b4f3271 253 SUPERFAMILY SSF52172 23 155 1.12E-40 T 12-10-2018 IPR011006 CheY-like superfamily JDM601_2063 a0c3e0bdb1347f49074808045f0108bd 341 Pfam PF05621 Bacterial TniB protein 82 319 1.8E-27 T 12-10-2018 IPR008868 Bacterial TniB JDM601_2063 a0c3e0bdb1347f49074808045f0108bd 341 Gene3D G3DSA:3.40.50.300 77 226 5.8E-9 T 12-10-2018 JDM601_2063 a0c3e0bdb1347f49074808045f0108bd 341 SUPERFAMILY SSF52540 91 326 2.13E-10 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_3275 6b8005af42612e3e1e3eb077773ca6c2 439 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 93 103 - T 12-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site JDM601_3275 6b8005af42612e3e1e3eb077773ca6c2 439 PRINTS PR00723 Subtilisin serine protease family (S8) signature 88 107 2.7E-12 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related JDM601_3275 6b8005af42612e3e1e3eb077773ca6c2 439 PRINTS PR00723 Subtilisin serine protease family (S8) signature 124 137 2.7E-12 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related JDM601_3275 6b8005af42612e3e1e3eb077773ca6c2 439 PRINTS PR00723 Subtilisin serine protease family (S8) signature 309 325 2.7E-12 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related JDM601_3275 6b8005af42612e3e1e3eb077773ca6c2 439 SUPERFAMILY SSF52743 74 369 4.45E-58 T 12-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 JDM601_3275 6b8005af42612e3e1e3eb077773ca6c2 439 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 128 138 - T 12-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site JDM601_3275 6b8005af42612e3e1e3eb077773ca6c2 439 Pfam PF00082 Subtilase family 88 359 1.7E-30 T 12-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 JDM601_3275 6b8005af42612e3e1e3eb077773ca6c2 439 TIGRFAM TIGR03921 T7SS_mycosin: type VII secretion-associated serine protease mycosin 78 431 1.3E-116 T 12-10-2018 IPR023834 Type VII secretion system peptidase S8A, mycosin JDM601_3275 6b8005af42612e3e1e3eb077773ca6c2 439 Gene3D G3DSA:3.40.50.200 31 372 1.2E-82 T 12-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 JDM601_3275 6b8005af42612e3e1e3eb077773ca6c2 439 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 310 320 - T 12-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site JDM601_1082 d49e37053b9a898aa8dabe44e74f8b92 372 Gene3D G3DSA:1.10.230.10 224 322 7.2E-127 T 12-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain JDM601_1082 d49e37053b9a898aa8dabe44e74f8b92 372 Pfam PF00285 Citrate synthase, C-terminal domain 9 357 3.5E-115 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 JDM601_1082 d49e37053b9a898aa8dabe44e74f8b92 372 Gene3D G3DSA:1.10.580.10 30 348 7.2E-127 T 12-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 JDM601_1082 d49e37053b9a898aa8dabe44e74f8b92 372 PIRSF PIRSF001369 1 372 7.3E-119 T 12-10-2018 IPR024176 Citrate synthase, bacterial-type JDM601_1082 d49e37053b9a898aa8dabe44e74f8b92 372 PRINTS PR00143 Citrate synthase signature 176 191 1.7E-36 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 JDM601_1082 d49e37053b9a898aa8dabe44e74f8b92 372 PRINTS PR00143 Citrate synthase signature 127 140 1.7E-36 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 JDM601_1082 d49e37053b9a898aa8dabe44e74f8b92 372 PRINTS PR00143 Citrate synthase signature 198 226 1.7E-36 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 JDM601_1082 d49e37053b9a898aa8dabe44e74f8b92 372 PRINTS PR00143 Citrate synthase signature 308 324 1.7E-36 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 JDM601_1082 d49e37053b9a898aa8dabe44e74f8b92 372 PRINTS PR00143 Citrate synthase signature 251 271 1.7E-36 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 JDM601_1082 d49e37053b9a898aa8dabe44e74f8b92 372 PRINTS PR00143 Citrate synthase signature 328 342 1.7E-36 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 JDM601_1082 d49e37053b9a898aa8dabe44e74f8b92 372 TIGRFAM TIGR01800 cit_synth_II: 2-methylcitrate synthase/citrate synthase II 8 367 2.2E-139 T 12-10-2018 IPR011278 2-methylcitrate synthase/citrate synthase type I GO:0005737|GO:0046912 JDM601_1082 d49e37053b9a898aa8dabe44e74f8b92 372 ProSitePatterns PS00480 Citrate synthase signature. 258 270 - T 12-10-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 JDM601_1082 d49e37053b9a898aa8dabe44e74f8b92 372 SUPERFAMILY SSF48256 6 368 4.06E-121 T 12-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 JDM601_0285 29407020c133e398297180404dd9195f 99 Pfam PF00934 PE family 3 91 1.1E-19 T 12-10-2018 IPR000084 PE-PGRS family, N-terminal JDM601_0285 29407020c133e398297180404dd9195f 99 ProDom PD195452 PE FAMILY PRECURSOR PE-FAMILY SIGNAL PE15 PE_1 38 97 5.0E-9 T 12-10-2018 JDM601_0285 29407020c133e398297180404dd9195f 99 SUPERFAMILY SSF140459 7 74 2.43E-11 T 12-10-2018 JDM601_0285 29407020c133e398297180404dd9195f 99 Gene3D G3DSA:1.10.287.850 1 98 4.0E-14 T 12-10-2018 JDM601_0871 7f605ea82a01b000a4ca3cb19003cc10 246 SUPERFAMILY SSF51735 1 245 3.43E-68 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_0871 7f605ea82a01b000a4ca3cb19003cc10 246 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 243 4.1E-53 T 12-10-2018 JDM601_0871 7f605ea82a01b000a4ca3cb19003cc10 246 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 137 165 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 JDM601_0871 7f605ea82a01b000a4ca3cb19003cc10 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 130 138 7.8E-12 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0871 7f605ea82a01b000a4ca3cb19003cc10 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 150 169 7.8E-12 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0871 7f605ea82a01b000a4ca3cb19003cc10 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 7.8E-12 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0871 7f605ea82a01b000a4ca3cb19003cc10 246 Gene3D G3DSA:3.40.50.720 1 245 1.4E-70 T 12-10-2018 JDM601_0871 7f605ea82a01b000a4ca3cb19003cc10 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 1.0E-38 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0871 7f605ea82a01b000a4ca3cb19003cc10 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 188 1.0E-38 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0871 7f605ea82a01b000a4ca3cb19003cc10 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 124 140 1.0E-38 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0871 7f605ea82a01b000a4ca3cb19003cc10 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 227 1.0E-38 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0871 7f605ea82a01b000a4ca3cb19003cc10 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 1.0E-38 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0871 7f605ea82a01b000a4ca3cb19003cc10 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 150 169 1.0E-38 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_4032 1e35ab0c084b47f06605cb4aa468ce8d 107 Pfam PF14230 Domain of unknown function (DUF4333) 27 99 3.7E-15 T 12-10-2018 IPR025637 Domain of unknown function DUF4333 JDM601_4084 d6bb0b59262a0cbcac837acb17e64729 76 Pfam PF01402 Ribbon-helix-helix protein, copG family 3 39 7.4E-7 T 12-10-2018 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 JDM601_4084 d6bb0b59262a0cbcac837acb17e64729 76 SUPERFAMILY SSF47598 2 39 1.56E-5 T 12-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 JDM601_1003 e13235f820d6621fa4d1377aab111af8 99 Pfam PF00934 PE family 1 93 1.5E-33 T 12-10-2018 IPR000084 PE-PGRS family, N-terminal JDM601_1003 e13235f820d6621fa4d1377aab111af8 99 Gene3D G3DSA:1.10.287.850 1 98 3.4E-33 T 12-10-2018 JDM601_1003 e13235f820d6621fa4d1377aab111af8 99 SUPERFAMILY SSF140459 8 84 5.49E-24 T 12-10-2018 JDM601_4034 fd11ae139029d50192b01daed55d1db3 150 TIGRFAM TIGR03941 tRNA_deam_assoc: putative tRNA adenosine deaminase-associated protein 1 143 1.6E-44 T 12-10-2018 IPR023869 tRNA adenosine deaminase-associated protein, putative JDM601_2704 7d04de881b1b2b3944ae7491a44572af 252 PIRSF PIRSF015736 2 246 4.0E-55 T 12-10-2018 IPR026286 Maleate isomerase/Arylmalonate decarboxylase JDM601_2704 7d04de881b1b2b3944ae7491a44572af 252 Gene3D G3DSA:3.40.50.12500 15 248 2.9E-57 T 12-10-2018 JDM601_0369 1a1342f0315fb477b191c2a8bd4273eb 404 Hamap MF_02056 O-succinylhomoserine sulfhydrylase [metZ]. 15 404 51.046 T 12-10-2018 IPR006234 O-succinylhomoserine sulfhydrylase GO:0071268 JDM601_0369 1a1342f0315fb477b191c2a8bd4273eb 404 PIRSF PIRSF001434 12 404 3.4E-112 T 12-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 JDM601_0369 1a1342f0315fb477b191c2a8bd4273eb 404 Gene3D G3DSA:3.40.640.10 12 263 4.5E-76 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 JDM601_0369 1a1342f0315fb477b191c2a8bd4273eb 404 Gene3D G3DSA:3.90.1150.10 264 404 3.5E-50 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 JDM601_0369 1a1342f0315fb477b191c2a8bd4273eb 404 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 15 403 2.7E-128 T 12-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 JDM601_0369 1a1342f0315fb477b191c2a8bd4273eb 404 TIGRFAM TIGR01325 O_suc_HS_sulf: O-succinylhomoserine sulfhydrylase 14 403 5.9E-193 T 12-10-2018 IPR006234 O-succinylhomoserine sulfhydrylase GO:0071268 JDM601_0369 1a1342f0315fb477b191c2a8bd4273eb 404 SUPERFAMILY SSF53383 37 403 9.87E-104 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase JDM601_0386 def232f48a3917336eb410f609eb8e82 336 TIGRFAM TIGR02352 thiamin_ThiO: glycine oxidase ThiO 10 330 2.9E-99 T 12-10-2018 IPR012727 Glycine oxidase ThiO GO:0016491|GO:0050660 KEGG: 00730+1.4.3.19|MetaCyc: PWY-7396|MetaCyc: PWY-7806 JDM601_0386 def232f48a3917336eb410f609eb8e82 336 SUPERFAMILY SSF54373 199 292 3.83E-17 T 12-10-2018 JDM601_0386 def232f48a3917336eb410f609eb8e82 336 SUPERFAMILY SSF51971 10 330 3.77E-27 T 12-10-2018 JDM601_0386 def232f48a3917336eb410f609eb8e82 336 Pfam PF01266 FAD dependent oxidoreductase 9 327 7.3E-47 T 12-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 JDM601_0386 def232f48a3917336eb410f609eb8e82 336 Gene3D G3DSA:3.30.9.10 88 291 4.9E-58 T 12-10-2018 JDM601_0386 def232f48a3917336eb410f609eb8e82 336 Gene3D G3DSA:3.50.50.60 10 326 4.9E-58 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_4000 0811bef4bf6229de222c2f6fc358b047 60 ProSitePatterns PS00202 Rubredoxin signature. 36 46 - T 12-10-2018 IPR018527 Rubredoxin, iron-binding site GO:0046872 JDM601_4000 0811bef4bf6229de222c2f6fc358b047 60 Pfam PF00301 Rubredoxin 7 52 8.8E-22 T 12-10-2018 IPR024935 Rubredoxin domain GO:0005506 JDM601_4000 0811bef4bf6229de222c2f6fc358b047 60 SUPERFAMILY SSF57802 3 57 8.41E-22 T 12-10-2018 JDM601_4000 0811bef4bf6229de222c2f6fc358b047 60 PIRSF PIRSF000071 1 60 1.9E-22 T 12-10-2018 IPR024922 Rubredoxin GO:0005506|GO:0009055 JDM601_4000 0811bef4bf6229de222c2f6fc358b047 60 Gene3D G3DSA:2.20.28.10 1 60 1.0E-30 T 12-10-2018 JDM601_4000 0811bef4bf6229de222c2f6fc358b047 60 PRINTS PR00163 Rubredoxin signature 6 22 1.9E-7 T 12-10-2018 IPR024935 Rubredoxin domain GO:0005506 JDM601_4000 0811bef4bf6229de222c2f6fc358b047 60 PRINTS PR00163 Rubredoxin signature 36 52 1.9E-7 T 12-10-2018 IPR024935 Rubredoxin domain GO:0005506 JDM601_1481 c35865dcf5e03d911f7704fb37f7da84 417 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 12 415 41.701 T 12-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 JDM601_1481 c35865dcf5e03d911f7704fb37f7da84 417 Gene3D G3DSA:3.40.605.10 25 410 1.9E-154 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 JDM601_1481 c35865dcf5e03d911f7704fb37f7da84 417 Pfam PF00171 Aldehyde dehydrogenase family 321 406 3.6E-6 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 JDM601_1481 c35865dcf5e03d911f7704fb37f7da84 417 Pfam PF00171 Aldehyde dehydrogenase family 11 291 1.8E-12 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 JDM601_1481 c35865dcf5e03d911f7704fb37f7da84 417 PIRSF PIRSF000151 6 416 2.6E-169 T 12-10-2018 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922 JDM601_1481 c35865dcf5e03d911f7704fb37f7da84 417 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 20 405 5.9E-140 T 12-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 JDM601_1481 c35865dcf5e03d911f7704fb37f7da84 417 Gene3D G3DSA:3.40.309.10 233 373 1.9E-154 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 JDM601_1481 c35865dcf5e03d911f7704fb37f7da84 417 SUPERFAMILY SSF53720 11 415 6.68E-113 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 JDM601_1481 c35865dcf5e03d911f7704fb37f7da84 417 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 322 343 - T 12-10-2018 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 JDM601_0723 b3d38f93d12db021f5fe45c12545bed0 302 Gene3D G3DSA:3.90.1200.10 113 301 8.1E-23 T 12-10-2018 JDM601_0723 b3d38f93d12db021f5fe45c12545bed0 302 SUPERFAMILY SSF56112 28 260 1.6E-25 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily JDM601_0723 b3d38f93d12db021f5fe45c12545bed0 302 Pfam PF01636 Phosphotransferase enzyme family 28 254 2.7E-20 T 12-10-2018 IPR002575 Aminoglycoside phosphotransferase JDM601_0905 4c4bab2298e55c87eadb088f801a3e8d 521 SMART SM00798 139 456 3.9E-177 T 12-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 JDM601_0905 4c4bab2298e55c87eadb088f801a3e8d 521 Gene3D G3DSA:3.40.140.20 214 367 1.5E-53 T 12-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 JDM601_0905 4c4bab2298e55c87eadb088f801a3e8d 521 SUPERFAMILY SSF52335 8 196 3.43E-61 T 12-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily JDM601_0905 4c4bab2298e55c87eadb088f801a3e8d 521 Pfam PF02142 MGS-like domain 20 133 8.5E-23 T 12-10-2018 IPR011607 Methylglyoxal synthase-like domain JDM601_0905 4c4bab2298e55c87eadb088f801a3e8d 521 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 8 521 41.105 T 12-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 JDM601_0905 4c4bab2298e55c87eadb088f801a3e8d 521 SUPERFAMILY SSF53927 216 521 5.62E-112 T 12-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 JDM601_0905 4c4bab2298e55c87eadb088f801a3e8d 521 Gene3D G3DSA:3.40.50.1380 1 202 1.2E-84 T 12-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily JDM601_0905 4c4bab2298e55c87eadb088f801a3e8d 521 Gene3D G3DSA:3.40.140.20 392 521 1.8E-51 T 12-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 JDM601_0905 4c4bab2298e55c87eadb088f801a3e8d 521 PIRSF PIRSF000414 2 521 7.4E-187 T 12-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 JDM601_0905 4c4bab2298e55c87eadb088f801a3e8d 521 Pfam PF01808 AICARFT/IMPCHase bienzyme 139 455 2.2E-109 T 12-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 JDM601_0905 4c4bab2298e55c87eadb088f801a3e8d 521 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 9 521 1.8E-164 T 12-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 JDM601_0905 4c4bab2298e55c87eadb088f801a3e8d 521 SMART SM00851 20 134 5.3E-45 T 12-10-2018 IPR011607 Methylglyoxal synthase-like domain JDM601_2431 acdfe8d1b044a557a51e8d206e26b923 390 Gene3D G3DSA:3.40.50.150 191 389 4.8E-43 T 12-10-2018 JDM601_2431 acdfe8d1b044a557a51e8d206e26b923 390 Gene3D G3DSA:2.40.50.140 2 73 8.3E-18 T 12-10-2018 JDM601_2431 acdfe8d1b044a557a51e8d206e26b923 390 SUPERFAMILY SSF50249 5 59 2.86E-12 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold JDM601_2431 acdfe8d1b044a557a51e8d206e26b923 390 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 317 389 6.8E-8 T 12-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 JDM601_2431 acdfe8d1b044a557a51e8d206e26b923 390 SUPERFAMILY SSF53335 63 389 9.78E-43 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JDM601_3758 2278eeb4b8b3b4321b12810c01d589e1 534 Gene3D G3DSA:3.50.30.10 334 448 5.4E-51 T 12-10-2018 JDM601_3758 2278eeb4b8b3b4321b12810c01d589e1 534 SUPERFAMILY SSF52009 341 450 9.03E-30 T 12-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 JDM601_3758 2278eeb4b8b3b4321b12810c01d589e1 534 Pfam PF00391 PEP-utilising enzyme, mobile domain 373 442 3.2E-22 T 12-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 JDM601_3758 2278eeb4b8b3b4321b12810c01d589e1 534 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 13 51 1.7E-5 T 12-10-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 JDM601_3758 2278eeb4b8b3b4321b12810c01d589e1 534 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 68 239 6.5E-28 T 12-10-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 JDM601_3758 2278eeb4b8b3b4321b12810c01d589e1 534 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 254 307 1.3E-5 T 12-10-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 JDM601_3758 2278eeb4b8b3b4321b12810c01d589e1 534 Gene3D G3DSA:3.30.470.20 195 292 2.7E-34 T 12-10-2018 JDM601_3758 2278eeb4b8b3b4321b12810c01d589e1 534 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 401 412 - T 12-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 JDM601_3758 2278eeb4b8b3b4321b12810c01d589e1 534 Gene3D G3DSA:1.10.189.10 296 469 5.4E-51 T 12-10-2018 JDM601_3758 2278eeb4b8b3b4321b12810c01d589e1 534 Gene3D G3DSA:3.30.1490.20 145 194 1.8E-10 T 12-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 JDM601_3758 2278eeb4b8b3b4321b12810c01d589e1 534 Gene3D G3DSA:3.30.1490.20 5 144 1.2E-34 T 12-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 JDM601_3758 2278eeb4b8b3b4321b12810c01d589e1 534 SUPERFAMILY SSF56059 1 327 5.89E-98 T 12-10-2018 JDM601_3566 7a3dc0778a6266a63661ba960d01332f 487 Gene3D G3DSA:3.40.50.2020 264 433 6.8E-141 T 12-10-2018 JDM601_3566 7a3dc0778a6266a63661ba960d01332f 487 SUPERFAMILY SSF56235 1 257 9.44E-62 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal JDM601_3566 7a3dc0778a6266a63661ba960d01332f 487 SUPERFAMILY SSF53271 240 458 5.24E-64 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like JDM601_3566 7a3dc0778a6266a63661ba960d01332f 487 Pfam PF00156 Phosphoribosyl transferase domain 275 375 2.4E-7 T 12-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 JDM601_3566 7a3dc0778a6266a63661ba960d01332f 487 Pfam PF13522 Glutamine amidotransferase domain 59 199 1.5E-13 T 12-10-2018 JDM601_3566 7a3dc0778a6266a63661ba960d01332f 487 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 1 450 44.011 T 12-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 JDM601_3566 7a3dc0778a6266a63661ba960d01332f 487 Gene3D G3DSA:3.60.20.10 1 452 6.8E-141 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal JDM601_3566 7a3dc0778a6266a63661ba960d01332f 487 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 1 451 2.8E-153 T 12-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 JDM601_3566 7a3dc0778a6266a63661ba960d01332f 487 PIRSF PIRSF000485 1 465 9.3E-151 T 12-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 JDM601_1654 46fde0b472e7e1d96d1252e451d1f435 908 Gene3D G3DSA:3.40.50.970 60 480 1.9E-131 T 12-10-2018 JDM601_1654 46fde0b472e7e1d96d1252e451d1f435 908 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 141 307 2.3E-9 T 12-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 JDM601_1654 46fde0b472e7e1d96d1252e451d1f435 908 SUPERFAMILY SSF52922 717 899 1.14E-51 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 JDM601_1654 46fde0b472e7e1d96d1252e451d1f435 908 Gene3D G3DSA:3.40.50.970 481 715 4.2E-104 T 12-10-2018 JDM601_1654 46fde0b472e7e1d96d1252e451d1f435 908 TIGRFAM TIGR00759 aceE: pyruvate dehydrogenase (acetyl-transferring), homodimeric type 9 901 0.0 T 12-10-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 JDM601_1654 46fde0b472e7e1d96d1252e451d1f435 908 PIRSF PIRSF000156 2 902 0.0 T 12-10-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 JDM601_1654 46fde0b472e7e1d96d1252e451d1f435 908 SUPERFAMILY SSF52518 482 710 2.65E-88 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold JDM601_1654 46fde0b472e7e1d96d1252e451d1f435 908 SUPERFAMILY SSF52518 61 476 1.22E-128 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold JDM601_1654 46fde0b472e7e1d96d1252e451d1f435 908 Gene3D G3DSA:3.40.50.920 721 901 1.3E-64 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 JDM601_2468 905a730e5b64bc0c1989a45f20282653 288 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 78 92 - T 12-10-2018 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 JDM601_2468 905a730e5b64bc0c1989a45f20282653 288 Gene3D G3DSA:3.10.310.10 144 278 4.7E-92 T 12-10-2018 JDM601_2468 905a730e5b64bc0c1989a45f20282653 288 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 1 281 8.2E-72 T 12-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 JDM601_2468 905a730e5b64bc0c1989a45f20282653 288 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 1 282 28.732 T 12-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 JDM601_2468 905a730e5b64bc0c1989a45f20282653 288 SUPERFAMILY SSF54506 149 280 1.86E-27 T 12-10-2018 JDM601_2468 905a730e5b64bc0c1989a45f20282653 288 Pfam PF01678 Diaminopimelate epimerase 158 273 1.6E-22 T 12-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 JDM601_2468 905a730e5b64bc0c1989a45f20282653 288 Pfam PF01678 Diaminopimelate epimerase 3 141 7.3E-39 T 12-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 JDM601_2468 905a730e5b64bc0c1989a45f20282653 288 Gene3D G3DSA:3.10.310.10 3 143 4.7E-92 T 12-10-2018 JDM601_2468 905a730e5b64bc0c1989a45f20282653 288 SUPERFAMILY SSF54506 1 140 2.07E-31 T 12-10-2018 JDM601_0046 d67915f3cd9a3681f36eb3d661fd1419 105 Pfam PF10921 Protein of unknown function (DUF2710) 2 102 1.9E-60 T 12-10-2018 IPR024296 Protein of unknown function DUF2710 JDM601_0046 d67915f3cd9a3681f36eb3d661fd1419 105 ProDom PD071857 MB0031 RV0030/MT0034 6 102 4.0E-33 T 12-10-2018 IPR024296 Protein of unknown function DUF2710 JDM601_3151 aa7b171d81754d368964cc5a0ab1c202 331 Gene3D G3DSA:2.120.10.30 29 261 1.6E-59 T 12-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like JDM601_3151 aa7b171d81754d368964cc5a0ab1c202 331 SUPERFAMILY SSF63829 10 324 9.81E-47 T 12-10-2018 JDM601_3151 aa7b171d81754d368964cc5a0ab1c202 331 Pfam PF08450 SMP-30/Gluconolaconase/LRE-like region 50 245 1.1E-18 T 12-10-2018 IPR013658 SMP-30/Gluconolactonase/LRE-like region JDM601_1971 bd275f9aba2863f37d6c5d5923157dd7 654 Pfam PF02129 X-Pro dipeptidyl-peptidase (S15 family) 70 365 3.8E-42 T 12-10-2018 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain GO:0016787 JDM601_1971 bd275f9aba2863f37d6c5d5923157dd7 654 SUPERFAMILY SSF49785 406 648 1.19E-36 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily JDM601_1971 bd275f9aba2863f37d6c5d5923157dd7 654 Gene3D G3DSA:3.40.50.1820 64 406 2.5E-62 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_1971 bd275f9aba2863f37d6c5d5923157dd7 654 Gene3D G3DSA:2.60.120.260 407 647 4.0E-45 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily JDM601_1971 bd275f9aba2863f37d6c5d5923157dd7 654 SMART SM00939 378 644 2.3E-36 T 12-10-2018 IPR013736 Xaa-Pro dipeptidyl-peptidase, C-terminal GO:0008239 JDM601_1971 bd275f9aba2863f37d6c5d5923157dd7 654 Gene3D G3DSA:1.10.3020.10 209 297 2.5E-62 T 12-10-2018 JDM601_1971 bd275f9aba2863f37d6c5d5923157dd7 654 TIGRFAM TIGR00976 /NonD: hydrolase CocE/NonD family protein 66 647 1.2E-75 T 12-10-2018 IPR005674 CocE/Serine esterase GO:0016787 JDM601_1971 bd275f9aba2863f37d6c5d5923157dd7 654 Pfam PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain 404 623 1.8E-30 T 12-10-2018 IPR013736 Xaa-Pro dipeptidyl-peptidase, C-terminal GO:0008239 JDM601_1971 bd275f9aba2863f37d6c5d5923157dd7 654 SUPERFAMILY SSF53474 49 408 9.46E-40 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_1156 85f507205c0b87859fe5633646bf3576 627 Gene3D G3DSA:3.30.70.870 327 610 2.7E-113 T 12-10-2018 JDM601_1156 85f507205c0b87859fe5633646bf3576 627 SUPERFAMILY SSF54980 419 533 1.15E-27 T 12-10-2018 IPR035647 EF-G domain III/V-like JDM601_1156 85f507205c0b87859fe5633646bf3576 627 Pfam PF00679 Elongation factor G C-terminus 417 501 2.3E-22 T 12-10-2018 IPR000640 Elongation factor EFG, domain V-like JDM601_1156 85f507205c0b87859fe5633646bf3576 627 SUPERFAMILY SSF50447 197 320 5.55E-29 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily JDM601_1156 85f507205c0b87859fe5633646bf3576 627 SUPERFAMILY SSF54980 322 408 7.19E-8 T 12-10-2018 IPR035647 EF-G domain III/V-like JDM601_1156 85f507205c0b87859fe5633646bf3576 627 Gene3D G3DSA:3.30.70.240 410 502 2.7E-113 T 12-10-2018 JDM601_1156 85f507205c0b87859fe5633646bf3576 627 PRINTS PR00315 GTP-binding elongation factor signature 74 84 7.2E-16 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JDM601_1156 85f507205c0b87859fe5633646bf3576 627 PRINTS PR00315 GTP-binding elongation factor signature 126 135 7.2E-16 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JDM601_1156 85f507205c0b87859fe5633646bf3576 627 PRINTS PR00315 GTP-binding elongation factor signature 5 18 7.2E-16 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JDM601_1156 85f507205c0b87859fe5633646bf3576 627 PRINTS PR00315 GTP-binding elongation factor signature 90 101 7.2E-16 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JDM601_1156 85f507205c0b87859fe5633646bf3576 627 PRINTS PR00315 GTP-binding elongation factor signature 49 57 7.2E-16 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JDM601_1156 85f507205c0b87859fe5633646bf3576 627 Gene3D G3DSA:2.40.30.10 217 319 8.9E-30 T 12-10-2018 JDM601_1156 85f507205c0b87859fe5633646bf3576 627 Gene3D G3DSA:2.40.50.250 503 618 2.7E-113 T 12-10-2018 JDM601_1156 85f507205c0b87859fe5633646bf3576 627 Pfam PF03144 Elongation factor Tu domain 2 236 309 1.9E-9 T 12-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 JDM601_1156 85f507205c0b87859fe5633646bf3576 627 Pfam PF00009 Elongation factor Tu GTP binding domain 2 212 5.4E-51 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JDM601_1156 85f507205c0b87859fe5633646bf3576 627 SUPERFAMILY SSF52540 3 150 3.28E-48 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_1156 85f507205c0b87859fe5633646bf3576 627 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 3 619 1.1E-268 T 12-10-2018 IPR006298 GTP-binding protein TypA GO:0005525 JDM601_1156 85f507205c0b87859fe5633646bf3576 627 Gene3D G3DSA:3.40.50.300 2 215 4.8E-54 T 12-10-2018 JDM601_1156 85f507205c0b87859fe5633646bf3576 627 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 139 2.7E-23 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 JDM601_4122 5811d1af7a34e529bdd4b6b3dfeac0b3 327 Pfam PF00756 Putative esterase 47 309 1.8E-63 T 12-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 JDM601_4122 5811d1af7a34e529bdd4b6b3dfeac0b3 327 SUPERFAMILY SSF53474 33 316 1.03E-37 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_4122 5811d1af7a34e529bdd4b6b3dfeac0b3 327 Gene3D G3DSA:3.40.50.1820 33 316 1.0E-81 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_1618 8eecf0e9d23bfffa214341b5aa249a9d 335 ProDom PD886639 ANTIGEN IMMUNOGENIC EXTRACELLULAR MPT63 MPB63 PRECURSOR IMMUNOPROTECTIVE SIGNAL SEQUENCING DIRECT 34 156 2.0E-18 T 12-10-2018 IPR015250 MPT63-like GO:0005615 JDM601_1618 8eecf0e9d23bfffa214341b5aa249a9d 335 Gene3D G3DSA:2.60.40.1240 31 158 2.0E-47 T 12-10-2018 IPR029050 Immunoprotective extracellular, immunoglobulin-like domain superfamily JDM601_1618 8eecf0e9d23bfffa214341b5aa249a9d 335 SUPERFAMILY SSF81982 33 157 2.48E-45 T 12-10-2018 JDM601_1618 8eecf0e9d23bfffa214341b5aa249a9d 335 Pfam PF09167 Domain of unknown function (DUF1942) 34 156 7.8E-51 T 12-10-2018 IPR015250 MPT63-like GO:0005615 JDM601_4110 aa95153d6d1e489097838e4f6591bffa 512 SUPERFAMILY SSF103473 25 443 1.31E-66 T 12-10-2018 IPR036259 MFS transporter superfamily JDM601_4110 aa95153d6d1e489097838e4f6591bffa 512 Pfam PF00083 Sugar (and other) transporter 33 231 1.7E-26 T 12-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 JDM601_4110 aa95153d6d1e489097838e4f6591bffa 512 Pfam PF00083 Sugar (and other) transporter 242 443 1.5E-11 T 12-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 JDM601_4110 aa95153d6d1e489097838e4f6591bffa 512 ProSitePatterns PS00217 Sugar transport proteins signature 2. 139 164 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 JDM601_4110 aa95153d6d1e489097838e4f6591bffa 512 ProSitePatterns PS00216 Sugar transport proteins signature 1. 312 328 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 JDM601_4110 aa95153d6d1e489097838e4f6591bffa 512 Gene3D G3DSA:1.20.1250.20 30 447 1.2E-66 T 12-10-2018 JDM601_0813 605ef0b1c0935e3e3c726d1697f53686 371 Gene3D G3DSA:1.10.230.10 212 312 7.1E-67 T 12-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain JDM601_0813 605ef0b1c0935e3e3c726d1697f53686 371 SUPERFAMILY SSF48256 8 357 2.75E-90 T 12-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 JDM601_0813 605ef0b1c0935e3e3c726d1697f53686 371 ProSitePatterns PS00480 Citrate synthase signature. 246 258 - T 12-10-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 JDM601_0813 605ef0b1c0935e3e3c726d1697f53686 371 Gene3D G3DSA:1.10.580.10 106 338 7.1E-67 T 12-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 JDM601_0813 605ef0b1c0935e3e3c726d1697f53686 371 Gene3D G3DSA:1.10.580.10 5 64 6.8E-12 T 12-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 JDM601_0813 605ef0b1c0935e3e3c726d1697f53686 371 Pfam PF00285 Citrate synthase, C-terminal domain 12 347 2.3E-84 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 JDM601_1913 ac8e673fb082c1ed97180e24659128a2 166 Gene3D G3DSA:3.10.180.10 5 148 3.1E-28 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase JDM601_1913 ac8e673fb082c1ed97180e24659128a2 166 Pfam PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 10 134 8.4E-22 T 12-10-2018 JDM601_1913 ac8e673fb082c1ed97180e24659128a2 166 SUPERFAMILY SSF54593 10 135 3.24E-14 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase JDM601_0475 2562164ccf3eebe0236cbf2a0cd0e05f 442 Hamap MF_01695 D-inositol-3-phosphate glycosyltransferase [mshA]. 10 415 50.2 T 12-10-2018 IPR017814 Mycothiol biosynthesis protein, MshA GO:0008375|GO:0010125 JDM601_0475 2562164ccf3eebe0236cbf2a0cd0e05f 442 Gene3D G3DSA:3.40.50.2000 15 407 1.4E-123 T 12-10-2018 JDM601_0475 2562164ccf3eebe0236cbf2a0cd0e05f 442 TIGRFAM TIGR03449 mycothiol_MshA: D-inositol-3-phosphate glycosyltransferase 11 412 9.0E-193 T 12-10-2018 IPR017814 Mycothiol biosynthesis protein, MshA GO:0008375|GO:0010125 JDM601_0475 2562164ccf3eebe0236cbf2a0cd0e05f 442 Pfam PF00534 Glycosyl transferases group 1 217 375 2.6E-35 T 12-10-2018 IPR001296 Glycosyl transferase, family 1 JDM601_0475 2562164ccf3eebe0236cbf2a0cd0e05f 442 Pfam PF13439 Glycosyltransferase Family 4 30 210 1.9E-30 T 12-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 JDM601_0475 2562164ccf3eebe0236cbf2a0cd0e05f 442 Gene3D G3DSA:3.40.50.2000 207 391 1.4E-123 T 12-10-2018 JDM601_0475 2562164ccf3eebe0236cbf2a0cd0e05f 442 SUPERFAMILY SSF53756 29 411 5.58E-83 T 12-10-2018 JDM601_1851 bce6e5c98a7ef74312860619750f4b2e 310 Pfam PF01513 ATP-NAD kinase 9 286 8.6E-74 T 12-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 JDM601_1851 bce6e5c98a7ef74312860619750f4b2e 310 SUPERFAMILY SSF111331 9 308 6.93E-81 T 12-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily JDM601_1851 bce6e5c98a7ef74312860619750f4b2e 310 Gene3D G3DSA:2.60.200.30 143 279 3.2E-94 T 12-10-2018 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal GO:0003951|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 JDM601_1851 bce6e5c98a7ef74312860619750f4b2e 310 Gene3D G3DSA:3.40.50.10330 72 300 3.2E-94 T 12-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 JDM601_1851 bce6e5c98a7ef74312860619750f4b2e 310 Hamap MF_00361 NAD kinase [nadK]. 8 302 29.705 T 12-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 JDM601_0187 5773d563c48878e76762a43201865e0a 472 Gene3D G3DSA:3.30.559.30 200 285 1.6E-7 T 12-10-2018 JDM601_0187 5773d563c48878e76762a43201865e0a 472 Pfam PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain 4 265 3.0E-80 T 12-10-2018 IPR004255 O-acyltransferase, WSD1, N-terminal GO:0004144|GO:0045017 KEGG: 00073+2.3.1.20|KEGG: 00561+2.3.1.20 JDM601_0187 5773d563c48878e76762a43201865e0a 472 TIGRFAM TIGR02946 acyl_WS_DGAT: acyltransferase, WS/DGAT/MGAT 4 456 1.2E-141 T 12-10-2018 IPR014292 Acyltransferase, WS/DGAT/MGAT GO:0016746|GO:0045017 KEGG: 00073+2.3.1.20|KEGG: 00561+2.3.1.20 JDM601_0187 5773d563c48878e76762a43201865e0a 472 Gene3D G3DSA:3.30.559.10 38 199 1.6E-7 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 JDM601_0187 5773d563c48878e76762a43201865e0a 472 SUPERFAMILY SSF52777 36 167 4.56E-11 T 12-10-2018 JDM601_0187 5773d563c48878e76762a43201865e0a 472 Pfam PF06974 Protein of unknown function (DUF1298) 305 452 1.4E-34 T 12-10-2018 IPR009721 O-acyltransferase WSD1, C-terminal GO:0004144 KEGG: 00073+2.3.1.20|KEGG: 00561+2.3.1.20 JDM601_1151 8c2aea96266badb82141ae2668da0819 222 Pfam PF02613 Nitrate reductase delta subunit 57 139 2.7E-9 T 12-10-2018 IPR020945 DMSO/Nitrate reductase chaperone JDM601_1151 8c2aea96266badb82141ae2668da0819 222 SUPERFAMILY SSF89155 20 180 5.89E-27 T 12-10-2018 IPR036411 TorD-like superfamily JDM601_1151 8c2aea96266badb82141ae2668da0819 222 Gene3D G3DSA:1.10.3480.10 18 182 1.2E-8 T 12-10-2018 JDM601_1151 8c2aea96266badb82141ae2668da0819 222 TIGRFAM TIGR00684 narJ: nitrate reductase molybdenum cofactor assembly chaperone 25 174 3.3E-50 T 12-10-2018 IPR003765 Nitrate reductase chaperone, NarJ GO:0051082|GO:0051131 JDM601_3928 b48e494eb87c4e851324e1fd38870bc5 497 Pfam PF00512 His Kinase A (phospho-acceptor) domain 255 321 7.2E-18 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JDM601_3928 b48e494eb87c4e851324e1fd38870bc5 497 PRINTS PR00344 Bacterial sensor protein C-terminal signature 464 477 5.4E-10 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JDM601_3928 b48e494eb87c4e851324e1fd38870bc5 497 PRINTS PR00344 Bacterial sensor protein C-terminal signature 424 434 5.4E-10 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JDM601_3928 b48e494eb87c4e851324e1fd38870bc5 497 PRINTS PR00344 Bacterial sensor protein C-terminal signature 406 420 5.4E-10 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JDM601_3928 b48e494eb87c4e851324e1fd38870bc5 497 PRINTS PR00344 Bacterial sensor protein C-terminal signature 441 459 5.4E-10 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JDM601_3928 b48e494eb87c4e851324e1fd38870bc5 497 Gene3D G3DSA:1.10.287.130 188 321 1.4E-22 T 12-10-2018 JDM601_3928 b48e494eb87c4e851324e1fd38870bc5 497 Gene3D G3DSA:3.30.565.10 325 479 2.6E-34 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JDM601_3928 b48e494eb87c4e851324e1fd38870bc5 497 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 364 478 1.2E-16 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JDM601_3928 b48e494eb87c4e851324e1fd38870bc5 497 SUPERFAMILY SSF47384 243 321 2.55E-18 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 JDM601_3928 b48e494eb87c4e851324e1fd38870bc5 497 SUPERFAMILY SSF55874 311 481 1.83E-34 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JDM601_3928 b48e494eb87c4e851324e1fd38870bc5 497 SMART SM00388 254 321 2.6E-22 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JDM601_3928 b48e494eb87c4e851324e1fd38870bc5 497 Pfam PF00672 HAMP domain 185 241 4.3E-8 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JDM601_3928 b48e494eb87c4e851324e1fd38870bc5 497 SMART SM00387 364 480 8.5E-33 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JDM601_3928 b48e494eb87c4e851324e1fd38870bc5 497 SMART SM00304 184 246 4.6E-6 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JDM601_2982 b99936e7e67db92744353137246f977a 219 Pfam PF01339 CheB methylesterase 18 190 1.1E-38 T 12-10-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 JDM601_2982 b99936e7e67db92744353137246f977a 219 Gene3D G3DSA:3.40.50.180 13 194 2.5E-40 T 12-10-2018 IPR035909 Methylesterase CheB, C-terminal JDM601_2982 b99936e7e67db92744353137246f977a 219 SUPERFAMILY SSF52738 17 195 1.57E-33 T 12-10-2018 IPR035909 Methylesterase CheB, C-terminal JDM601_4208 a448df5127eea0ec873dc964c11e1e1a 608 SUPERFAMILY SSF51556 84 536 4.28E-68 T 12-10-2018 IPR032466 Metal-dependent hydrolase JDM601_4208 a448df5127eea0ec873dc964c11e1e1a 608 Pfam PF07969 Amidohydrolase family 72 589 2.8E-61 T 12-10-2018 IPR013108 Amidohydrolase 3 JDM601_4208 a448df5127eea0ec873dc964c11e1e1a 608 SUPERFAMILY SSF51338 23 603 4.07E-19 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 JDM601_4208 a448df5127eea0ec873dc964c11e1e1a 608 Gene3D G3DSA:3.20.20.140 83 395 1.7E-56 T 12-10-2018 JDM601_3244 a19750d1afc630f324a8848938c08966 290 Gene3D G3DSA:3.40.960.10 183 283 9.0E-9 T 12-10-2018 JDM601_3244 a19750d1afc630f324a8848938c08966 290 SUPERFAMILY SSF52980 177 283 3.27E-5 T 12-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 JDM601_0735 3edbee58096ee8e48ce86367b9adb897 396 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 241 386 1.4E-37 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 JDM601_0735 3edbee58096ee8e48ce86367b9adb897 396 Gene3D G3DSA:1.10.540.10 2 124 9.3E-30 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 JDM601_0735 3edbee58096ee8e48ce86367b9adb897 396 SUPERFAMILY SSF56645 5 254 1.3E-62 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 JDM601_0735 3edbee58096ee8e48ce86367b9adb897 396 SUPERFAMILY SSF47203 239 394 2.09E-49 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 JDM601_0735 3edbee58096ee8e48ce86367b9adb897 396 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 348 367 - T 12-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 JDM601_0735 3edbee58096ee8e48ce86367b9adb897 396 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 10 123 8.8E-25 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 JDM601_0735 3edbee58096ee8e48ce86367b9adb897 396 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 127 228 4.8E-19 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 JDM601_0735 3edbee58096ee8e48ce86367b9adb897 396 Gene3D G3DSA:2.40.110.10 126 245 8.9E-32 T 12-10-2018 JDM601_0735 3edbee58096ee8e48ce86367b9adb897 396 Gene3D G3DSA:1.20.140.10 246 390 4.2E-42 T 12-10-2018 JDM601_0735 3edbee58096ee8e48ce86367b9adb897 396 PIRSF PIRSF016578 4 395 6.1E-15 T 12-10-2018 JDM601_3951 461db423cd369d50e427cdade55fcbbd 210 Gene3D G3DSA:3.40.30.10 81 206 4.1E-21 T 12-10-2018 JDM601_3951 461db423cd369d50e427cdade55fcbbd 210 SUPERFAMILY SSF52833 84 190 2.63E-20 T 12-10-2018 IPR036249 Thioredoxin-like superfamily JDM601_3951 461db423cd369d50e427cdade55fcbbd 210 Pfam PF08534 Redoxin 79 189 7.2E-13 T 12-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 JDM601_1568 575b4a526b8069dfba16c7e9d4031dd9 130 Gene3D G3DSA:1.10.10.10 2 77 9.3E-33 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JDM601_1568 575b4a526b8069dfba16c7e9d4031dd9 130 SUPERFAMILY SSF46785 3 127 1.56E-37 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JDM601_1568 575b4a526b8069dfba16c7e9d4031dd9 130 Pfam PF01475 Ferric uptake regulator family 5 121 7.0E-37 T 12-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 JDM601_1568 575b4a526b8069dfba16c7e9d4031dd9 130 Gene3D G3DSA:3.30.1490.190 78 130 4.0E-24 T 12-10-2018 JDM601_2288 704a74b872e58ee85c17d2bedae1344c 523 Gene3D G3DSA:1.20.1720.10 12 228 1.3E-34 T 12-10-2018 JDM601_2288 704a74b872e58ee85c17d2bedae1344c 523 ProSitePatterns PS00216 Sugar transport proteins signature 1. 70 86 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 JDM601_2288 704a74b872e58ee85c17d2bedae1344c 523 SUPERFAMILY SSF103473 5 499 8.37E-43 T 12-10-2018 IPR036259 MFS transporter superfamily JDM601_2288 704a74b872e58ee85c17d2bedae1344c 523 Pfam PF07690 Major Facilitator Superfamily 49 430 6.5E-36 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 JDM601_2215 24a0c2967581ca4550227962a4721444 1645 SUPERFAMILY SSF53901 2 294 5.9E-73 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 JDM601_2215 24a0c2967581ca4550227962a4721444 1645 Gene3D G3DSA:1.10.1200.10 1519 1604 1.3E-21 T 12-10-2018 IPR036736 ACP-like superfamily JDM601_2215 24a0c2967581ca4550227962a4721444 1645 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1558 1573 - T 12-10-2018 IPR006162 Phosphopantetheine attachment site JDM601_2215 24a0c2967581ca4550227962a4721444 1645 SMART SM00826 789 930 0.0063 T 12-10-2018 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 JDM601_2215 24a0c2967581ca4550227962a4721444 1645 SMART SM01294 1533 1599 3.6E-8 T 12-10-2018 JDM601_2215 24a0c2967581ca4550227962a4721444 1645 SUPERFAMILY SSF51735 1254 1481 2.13E-33 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_2215 24a0c2967581ca4550227962a4721444 1645 SUPERFAMILY SSF47336 1530 1614 2.88E-15 T 12-10-2018 IPR036736 ACP-like superfamily JDM601_2215 24a0c2967581ca4550227962a4721444 1645 SUPERFAMILY SSF55048 562 623 2.22E-7 T 12-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding JDM601_2215 24a0c2967581ca4550227962a4721444 1645 SUPERFAMILY SSF51735 1061 1241 6.5E-22 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_2215 24a0c2967581ca4550227962a4721444 1645 Pfam PF08659 KR domain 1256 1449 5.9E-57 T 12-10-2018 IPR013968 Polyketide synthase, ketoreductase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 JDM601_2215 24a0c2967581ca4550227962a4721444 1645 Gene3D G3DSA:3.10.129.110 790 1057 6.4E-21 T 12-10-2018 JDM601_2215 24a0c2967581ca4550227962a4721444 1645 Gene3D G3DSA:3.40.50.720 1065 1512 3.1E-91 T 12-10-2018 JDM601_2215 24a0c2967581ca4550227962a4721444 1645 SMART SM00823 Phosphopantetheine attachment site 1532 1603 5.3E-17 T 12-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 JDM601_2215 24a0c2967581ca4550227962a4721444 1645 Gene3D G3DSA:3.40.47.10 1 353 3.1E-142 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 JDM601_2215 24a0c2967581ca4550227962a4721444 1645 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 1256 1450 4.7E-44 T 12-10-2018 JDM601_2215 24a0c2967581ca4550227962a4721444 1645 Gene3D G3DSA:3.30.70.250 558 624 2.3E-113 T 12-10-2018 JDM601_2215 24a0c2967581ca4550227962a4721444 1645 Pfam PF14765 Polyketide synthase dehydratase 791 1057 5.1E-22 T 12-10-2018 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 JDM601_2215 24a0c2967581ca4550227962a4721444 1645 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 1 159 3.3E-54 T 12-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal JDM601_2215 24a0c2967581ca4550227962a4721444 1645 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 440 730 6.7E-85 T 12-10-2018 IPR020801 Polyketide synthase, acyl transferase domain JDM601_2215 24a0c2967581ca4550227962a4721444 1645 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 72 88 - T 12-10-2018 IPR018201 Beta-ketoacyl synthase, active site JDM601_2215 24a0c2967581ca4550227962a4721444 1645 Pfam PF00550 Phosphopantetheine attachment site 1535 1599 5.4E-14 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain JDM601_2215 24a0c2967581ca4550227962a4721444 1645 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 167 283 1.8E-42 T 12-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal JDM601_2215 24a0c2967581ca4550227962a4721444 1645 Gene3D G3DSA:3.40.366.20 354 744 2.3E-113 T 12-10-2018 JDM601_2215 24a0c2967581ca4550227962a4721444 1645 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 294 397 2.2E-10 T 12-10-2018 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 JDM601_2215 24a0c2967581ca4550227962a4721444 1645 SMART SM00825 Beta-ketoacyl synthase 1 336 1.7E-129 T 12-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain JDM601_2215 24a0c2967581ca4550227962a4721444 1645 SUPERFAMILY SSF52151 437 726 7.32E-58 T 12-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase JDM601_2215 24a0c2967581ca4550227962a4721444 1645 Pfam PF00698 Acyl transferase domain 438 744 1.8E-80 T 12-10-2018 IPR014043 Acyl transferase JDM601_0154 0e7cbfbf5f02f791cc926a2f67e69a30 219 SUPERFAMILY SSF53335 3 216 1.95E-41 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JDM601_0154 0e7cbfbf5f02f791cc926a2f67e69a30 219 Gene3D G3DSA:3.40.50.150 2 219 2.9E-71 T 12-10-2018 JDM601_0154 0e7cbfbf5f02f791cc926a2f67e69a30 219 Pfam PF01596 O-methyltransferase 33 188 1.6E-33 T 12-10-2018 IPR002935 O-methyltransferase, family 3 GO:0008171 JDM601_0822 75c38eba794273d03957d3eb711d3be1 444 Gene3D G3DSA:1.20.1480.50 131 222 8.4E-6 T 12-10-2018 JDM601_0822 75c38eba794273d03957d3eb711d3be1 444 SUPERFAMILY SSF55874 301 441 7.07E-28 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JDM601_0822 75c38eba794273d03957d3eb711d3be1 444 Pfam PF00672 HAMP domain 171 215 6.3E-7 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JDM601_0822 75c38eba794273d03957d3eb711d3be1 444 SMART SM00304 168 220 4.1E-6 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JDM601_0822 75c38eba794273d03957d3eb711d3be1 444 SMART SM00387 336 444 3.2E-24 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JDM601_0822 75c38eba794273d03957d3eb711d3be1 444 SUPERFAMILY SSF47384 213 290 4.9E-11 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 JDM601_0822 75c38eba794273d03957d3eb711d3be1 444 SMART SM00388 228 294 2.5E-11 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JDM601_0822 75c38eba794273d03957d3eb711d3be1 444 Pfam PF00512 His Kinase A (phospho-acceptor) domain 230 291 2.0E-10 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JDM601_0822 75c38eba794273d03957d3eb711d3be1 444 Gene3D G3DSA:3.30.565.10 296 442 1.6E-35 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JDM601_0822 75c38eba794273d03957d3eb711d3be1 444 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 338 442 1.1E-17 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JDM601_0822 75c38eba794273d03957d3eb711d3be1 444 Gene3D G3DSA:1.10.287.130 223 295 5.1E-10 T 12-10-2018 JDM601_0822 75c38eba794273d03957d3eb711d3be1 444 PRINTS PR00344 Bacterial sensor protein C-terminal signature 428 441 3.4E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JDM601_0822 75c38eba794273d03957d3eb711d3be1 444 PRINTS PR00344 Bacterial sensor protein C-terminal signature 390 400 3.4E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JDM601_0822 75c38eba794273d03957d3eb711d3be1 444 PRINTS PR00344 Bacterial sensor protein C-terminal signature 404 422 3.4E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JDM601_0822 75c38eba794273d03957d3eb711d3be1 444 PRINTS PR00344 Bacterial sensor protein C-terminal signature 372 386 3.4E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JDM601_3164 5af3a6345534f9a2578c87127c1f9169 503 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 265 472 3.5E-34 T 12-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 JDM601_3164 5af3a6345534f9a2578c87127c1f9169 503 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 4 215 2.6E-45 T 12-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 JDM601_3164 5af3a6345534f9a2578c87127c1f9169 503 SUPERFAMILY SSF53790 2 237 1.44E-45 T 12-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 JDM601_3164 5af3a6345534f9a2578c87127c1f9169 503 TIGRFAM TIGR01467 cobI_cbiL: precorrin-2 C(20)-methyltransferase 3 236 3.8E-63 T 12-10-2018 IPR006364 Precorrin-2 C(20)-methyltransferase domain GO:0008757|GO:0009236 JDM601_3164 5af3a6345534f9a2578c87127c1f9169 503 TIGRFAM TIGR01466 cobJ_cbiH: precorrin-3B C17-methyltransferase 265 500 1.7E-82 T 12-10-2018 IPR006363 Precorrin-3B C17-methyltransferase domain GO:0008168|GO:0009236 JDM601_3164 5af3a6345534f9a2578c87127c1f9169 503 Gene3D G3DSA:3.40.1010.10 259 373 1.0E-25 T 12-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 JDM601_3164 5af3a6345534f9a2578c87127c1f9169 503 Gene3D G3DSA:3.30.950.10 374 502 2.8E-49 T 12-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 JDM601_3164 5af3a6345534f9a2578c87127c1f9169 503 SUPERFAMILY SSF53790 264 501 6.67E-49 T 12-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 JDM601_3164 5af3a6345534f9a2578c87127c1f9169 503 Gene3D G3DSA:3.30.950.10 135 258 6.7E-18 T 12-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 JDM601_3164 5af3a6345534f9a2578c87127c1f9169 503 Gene3D G3DSA:3.40.1010.10 1 134 1.0E-31 T 12-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 JDM601_2293 14708ae726fedfa57abbcaf384dff619 429 Gene3D G3DSA:3.40.50.300 243 420 3.1E-32 T 12-10-2018 JDM601_2293 14708ae726fedfa57abbcaf384dff619 429 Pfam PF13671 AAA domain 245 377 2.0E-18 T 12-10-2018 JDM601_2293 14708ae726fedfa57abbcaf384dff619 429 SUPERFAMILY SSF56112 14 204 7.96E-11 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily JDM601_2293 14708ae726fedfa57abbcaf384dff619 429 SUPERFAMILY SSF52540 245 372 6.29E-21 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_3354 d47af2f7d9302db5722d7ff0491d1b58 356 SUPERFAMILY SSF56112 30 315 2.77E-30 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily JDM601_3354 d47af2f7d9302db5722d7ff0491d1b58 356 Gene3D G3DSA:3.90.1200.10 134 314 6.8E-10 T 12-10-2018 JDM601_3354 d47af2f7d9302db5722d7ff0491d1b58 356 SMART SM00587 120 295 4.2E-5 T 12-10-2018 IPR015897 CHK kinase-like JDM601_3354 d47af2f7d9302db5722d7ff0491d1b58 356 Pfam PF02958 Ecdysteroid kinase 52 292 8.9E-18 T 12-10-2018 IPR004119 Protein of unknown function DUF227 JDM601_0645 2e2605208e84ce67e6d79a77e5feb5e3 387 Gene3D G3DSA:3.40.50.720 268 325 7.3E-15 T 12-10-2018 JDM601_0645 2e2605208e84ce67e6d79a77e5feb5e3 387 Gene3D G3DSA:3.90.180.10 15 151 2.4E-49 T 12-10-2018 JDM601_0645 2e2605208e84ce67e6d79a77e5feb5e3 387 Gene3D G3DSA:3.40.50.720 152 245 2.4E-49 T 12-10-2018 JDM601_0645 2e2605208e84ce67e6d79a77e5feb5e3 387 Gene3D G3DSA:3.90.180.10 326 365 7.3E-15 T 12-10-2018 JDM601_0645 2e2605208e84ce67e6d79a77e5feb5e3 387 Pfam PF00107 Zinc-binding dehydrogenase 174 340 3.7E-10 T 12-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 JDM601_0645 2e2605208e84ce67e6d79a77e5feb5e3 387 SUPERFAMILY SSF51735 140 342 9.87E-27 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_0645 2e2605208e84ce67e6d79a77e5feb5e3 387 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 24 102 1.3E-8 T 12-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 JDM601_0645 2e2605208e84ce67e6d79a77e5feb5e3 387 SUPERFAMILY SSF50129 10 173 5.69E-28 T 12-10-2018 IPR011032 GroES-like superfamily JDM601_1932 172f7bdf300a54c27423a5377f335dd8 448 Gene3D G3DSA:3.30.465.10 360 443 3.1E-18 T 12-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 JDM601_1932 172f7bdf300a54c27423a5377f335dd8 448 SUPERFAMILY SSF54631 215 354 1.12E-26 T 12-10-2018 JDM601_1932 172f7bdf300a54c27423a5377f335dd8 448 Gene3D G3DSA:3.10.580.10 200 350 2.5E-42 T 12-10-2018 JDM601_1932 172f7bdf300a54c27423a5377f335dd8 448 Pfam PF03471 Transporter associated domain 356 442 1.6E-19 T 12-10-2018 IPR005170 Transporter-associated domain JDM601_1932 172f7bdf300a54c27423a5377f335dd8 448 Pfam PF01595 Domain of unknown function DUF21 11 203 9.1E-33 T 12-10-2018 IPR002550 CNNM, transmembrane domain JDM601_1932 172f7bdf300a54c27423a5377f335dd8 448 SMART SM01091 354 444 5.8E-23 T 12-10-2018 IPR005170 Transporter-associated domain JDM601_1932 172f7bdf300a54c27423a5377f335dd8 448 Pfam PF00571 CBS domain 303 340 0.0022 T 12-10-2018 IPR000644 CBS domain JDM601_1932 172f7bdf300a54c27423a5377f335dd8 448 Pfam PF00571 CBS domain 221 274 4.3E-5 T 12-10-2018 IPR000644 CBS domain JDM601_1932 172f7bdf300a54c27423a5377f335dd8 448 SMART SM00116 229 278 0.27 T 12-10-2018 IPR000644 CBS domain JDM601_1932 172f7bdf300a54c27423a5377f335dd8 448 SMART SM00116 292 340 16.0 T 12-10-2018 IPR000644 CBS domain JDM601_1932 172f7bdf300a54c27423a5377f335dd8 448 SUPERFAMILY SSF56176 356 444 9.56E-19 T 12-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 JDM601_3388 ccc571f1ea247872b5556608ddc14303 356 SUPERFAMILY SSF47203 198 340 2.09E-25 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 JDM601_3388 ccc571f1ea247872b5556608ddc14303 356 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 198 328 1.3E-15 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 JDM601_3388 ccc571f1ea247872b5556608ddc14303 356 SUPERFAMILY SSF56645 10 105 3.01E-16 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 JDM601_3388 ccc571f1ea247872b5556608ddc14303 356 Gene3D G3DSA:1.20.140.10 197 347 3.9E-23 T 12-10-2018 JDM601_3388 ccc571f1ea247872b5556608ddc14303 356 Gene3D G3DSA:1.10.540.10 9 112 5.9E-24 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 JDM601_3388 ccc571f1ea247872b5556608ddc14303 356 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 14 103 4.2E-13 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 JDM601_2379 9dcf63ef499765a51b904dad4b50ffa3 196 Pfam PF01330 RuvA N terminal domain 1 61 1.0E-18 T 12-10-2018 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 JDM601_2379 9dcf63ef499765a51b904dad4b50ffa3 196 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 191 2.5E-39 T 12-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 JDM601_2379 9dcf63ef499765a51b904dad4b50ffa3 196 Pfam PF07499 RuvA, C-terminal domain 151 192 1.3E-11 T 12-10-2018 IPR011114 Holliday junction DNA helicase RuvA, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 JDM601_2379 9dcf63ef499765a51b904dad4b50ffa3 196 Pfam PF14520 Helix-hairpin-helix domain 71 129 1.4E-15 T 12-10-2018 JDM601_2379 9dcf63ef499765a51b904dad4b50ffa3 196 Gene3D G3DSA:1.10.8.10 139 196 1.4E-20 T 12-10-2018 JDM601_2379 9dcf63ef499765a51b904dad4b50ffa3 196 SUPERFAMILY SSF50249 1 62 5.37E-14 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold JDM601_2379 9dcf63ef499765a51b904dad4b50ffa3 196 SUPERFAMILY SSF46929 148 194 2.88E-9 T 12-10-2018 IPR036267 RuvA, C-terminal domain superfamily JDM601_2379 9dcf63ef499765a51b904dad4b50ffa3 196 SUPERFAMILY SSF47781 65 132 4.23E-19 T 12-10-2018 IPR010994 RuvA domain 2-like JDM601_2379 9dcf63ef499765a51b904dad4b50ffa3 196 Gene3D G3DSA:1.10.150.20 66 138 3.9E-23 T 12-10-2018 JDM601_2379 9dcf63ef499765a51b904dad4b50ffa3 196 SMART SM00278 72 91 15.0 T 12-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 JDM601_2379 9dcf63ef499765a51b904dad4b50ffa3 196 SMART SM00278 107 126 1.7 T 12-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 JDM601_2379 9dcf63ef499765a51b904dad4b50ffa3 196 Gene3D G3DSA:2.40.50.140 1 64 3.6E-27 T 12-10-2018 JDM601_2379 9dcf63ef499765a51b904dad4b50ffa3 196 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 193 29.232 T 12-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 JDM601_2210 88bb8c2122650c2d2a0f7f0d80dec533 276 PIRSF PIRSF028177 2 269 1.1E-69 T 12-10-2018 IPR016874 Tetracenomycin polyketide synthesis O-methyltransferase TcmP GO:0017000|GO:1901106 JDM601_2210 88bb8c2122650c2d2a0f7f0d80dec533 276 Pfam PF04072 Leucine carboxyl methyltransferase 49 175 6.5E-12 T 12-10-2018 IPR007213 Methyltransferase Ppm1/Ppm2/Tcmp GO:0008168|GO:0032259 JDM601_2210 88bb8c2122650c2d2a0f7f0d80dec533 276 SUPERFAMILY SSF53335 14 244 5.15E-52 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JDM601_2210 88bb8c2122650c2d2a0f7f0d80dec533 276 Gene3D G3DSA:3.40.50.150 9 224 3.0E-35 T 12-10-2018 JDM601_0652 be223eaded8faf8ee69e50ee4b907ba4 145 SUPERFAMILY SSF55961 5 142 1.2E-15 T 12-10-2018 JDM601_0652 be223eaded8faf8ee69e50ee4b907ba4 145 Pfam PF10604 Polyketide cyclase / dehydrase and lipid transport 5 144 9.5E-14 T 12-10-2018 IPR019587 Polyketide cyclase/dehydrase JDM601_0652 be223eaded8faf8ee69e50ee4b907ba4 145 Gene3D G3DSA:3.30.530.20 1 145 5.0E-14 T 12-10-2018 IPR023393 START-like domain superfamily JDM601_3351 87b917071b9d6ad5f7803fcb30701b76 199 TIGRFAM TIGR03968 mycofact_TetR: mycofactocin system transcriptional regulator 11 198 6.4E-88 T 12-10-2018 IPR023851 Transcriptional regulator, TetR-type JDM601_3351 87b917071b9d6ad5f7803fcb30701b76 199 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 23 36 2.2E-6 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_3351 87b917071b9d6ad5f7803fcb30701b76 199 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 44 67 2.2E-6 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_3351 87b917071b9d6ad5f7803fcb30701b76 199 SUPERFAMILY SSF48498 93 194 2.41E-5 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily JDM601_3351 87b917071b9d6ad5f7803fcb30701b76 199 SUPERFAMILY SSF46689 13 84 3.74E-17 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JDM601_3351 87b917071b9d6ad5f7803fcb30701b76 199 Gene3D G3DSA:1.10.357.10 61 197 5.7E-33 T 12-10-2018 JDM601_3351 87b917071b9d6ad5f7803fcb30701b76 199 Pfam PF00440 Bacterial regulatory proteins, tetR family 23 65 4.5E-13 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_3351 87b917071b9d6ad5f7803fcb30701b76 199 Gene3D G3DSA:1.10.10.60 18 60 1.5E-18 T 12-10-2018 JDM601_0681 81d66e299fb10115ac6966002cef2063 350 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JDM601_0681 81d66e299fb10115ac6966002cef2063 350 Pfam PF00005 ABC transporter 21 168 1.1E-28 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JDM601_0681 81d66e299fb10115ac6966002cef2063 350 SMART SM00382 29 225 4.7E-16 T 12-10-2018 IPR003593 AAA+ ATPase domain JDM601_0681 81d66e299fb10115ac6966002cef2063 350 Gene3D G3DSA:3.40.50.300 2 333 6.8E-61 T 12-10-2018 JDM601_0681 81d66e299fb10115ac6966002cef2063 350 SUPERFAMILY SSF52540 5 232 1.85E-59 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_1382 ae0788fa46e34952a6d0e86f361ebb94 233 Gene3D G3DSA:3.20.20.80 24 233 1.0E-65 T 12-10-2018 JDM601_1382 ae0788fa46e34952a6d0e86f361ebb94 233 Pfam PF08924 Domain of unknown function (DUF1906) 44 169 4.8E-30 T 12-10-2018 IPR015020 Protein of unknown function DUF1906 JDM601_1382 ae0788fa46e34952a6d0e86f361ebb94 233 SUPERFAMILY SSF51445 50 192 5.05E-7 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily JDM601_2941 8682608a20a034ec0f9074fd2cca7da2 247 Gene3D G3DSA:1.10.10.60 26 88 1.5E-21 T 12-10-2018 JDM601_2941 8682608a20a034ec0f9074fd2cca7da2 247 SUPERFAMILY SSF48498 97 244 5.78E-22 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily JDM601_2941 8682608a20a034ec0f9074fd2cca7da2 247 Pfam PF02909 Tetracyclin repressor, C-terminal all-alpha domain 98 241 4.6E-15 T 12-10-2018 IPR004111 Tetracycline transcriptional regulator, TetR, C-terminal GO:0045892 JDM601_2941 8682608a20a034ec0f9074fd2cca7da2 247 Pfam PF00440 Bacterial regulatory proteins, tetR family 34 77 2.5E-6 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_2941 8682608a20a034ec0f9074fd2cca7da2 247 Gene3D G3DSA:1.10.357.10 97 245 1.7E-27 T 12-10-2018 JDM601_2941 8682608a20a034ec0f9074fd2cca7da2 247 SUPERFAMILY SSF46689 25 94 8.72E-14 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JDM601_2677 da18be31d3d3c7e5fac7a187624201fb 742 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 24 713 3.6E-216 T 12-10-2018 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 JDM601_2677 da18be31d3d3c7e5fac7a187624201fb 742 SMART SM00487 287 491 4.8E-28 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain JDM601_2677 da18be31d3d3c7e5fac7a187624201fb 742 Gene3D G3DSA:3.40.50.300 493 677 3.8E-48 T 12-10-2018 JDM601_2677 da18be31d3d3c7e5fac7a187624201fb 742 SMART SM00490 551 636 6.5E-18 T 12-10-2018 IPR001650 Helicase, C-terminal JDM601_2677 da18be31d3d3c7e5fac7a187624201fb 742 Pfam PF00271 Helicase conserved C-terminal domain 513 635 5.3E-17 T 12-10-2018 IPR001650 Helicase, C-terminal JDM601_2677 da18be31d3d3c7e5fac7a187624201fb 742 Pfam PF00270 DEAD/DEAH box helicase 313 467 4.1E-17 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 JDM601_2677 da18be31d3d3c7e5fac7a187624201fb 742 SUPERFAMILY SSF52540 207 484 6.29E-52 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_2677 da18be31d3d3c7e5fac7a187624201fb 742 Gene3D G3DSA:2.40.50.140 52 140 1.3E-10 T 12-10-2018 JDM601_2677 da18be31d3d3c7e5fac7a187624201fb 742 SUPERFAMILY SSF50249 12 202 4.45E-17 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold JDM601_2677 da18be31d3d3c7e5fac7a187624201fb 742 Gene3D G3DSA:3.40.50.300 230 482 1.5E-78 T 12-10-2018 JDM601_2677 da18be31d3d3c7e5fac7a187624201fb 742 SUPERFAMILY SSF52540 312 691 6.1E-41 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_0702 051393de6101c932b3194cb4e831bd2c 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 183 200 1.6E-36 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0702 051393de6101c932b3194cb4e831bd2c 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 14 31 1.6E-36 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0702 051393de6101c932b3194cb4e831bd2c 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 89 100 1.6E-36 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0702 051393de6101c932b3194cb4e831bd2c 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 215 235 1.6E-36 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0702 051393de6101c932b3194cb4e831bd2c 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 163 182 1.6E-36 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0702 051393de6101c932b3194cb4e831bd2c 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 137 153 1.6E-36 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0702 051393de6101c932b3194cb4e831bd2c 252 SUPERFAMILY SSF51735 12 250 9.36E-71 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_0702 051393de6101c932b3194cb4e831bd2c 252 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 21 250 1.2E-49 T 12-10-2018 JDM601_0702 051393de6101c932b3194cb4e831bd2c 252 Gene3D G3DSA:3.40.50.720 6 251 3.7E-71 T 12-10-2018 JDM601_0702 051393de6101c932b3194cb4e831bd2c 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 143 151 3.4E-11 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0702 051393de6101c932b3194cb4e831bd2c 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 89 100 3.4E-11 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0702 051393de6101c932b3194cb4e831bd2c 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 163 182 3.4E-11 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_1401 514a052bbe24f44530dbc10d40f75e85 249 Pfam PF01144 Coenzyme A transferase 8 235 6.4E-78 T 12-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 JDM601_1401 514a052bbe24f44530dbc10d40f75e85 249 SUPERFAMILY SSF100950 3 245 4.47E-89 T 12-10-2018 IPR037171 NagB/RpiA transferase-like JDM601_1401 514a052bbe24f44530dbc10d40f75e85 249 ProSitePatterns PS01273 Coenzyme A transferases signature 1. 19 34 - T 12-10-2018 IPR004163 Coenzyme A transferase binding site GO:0008410 Reactome: R-HSA-77108 JDM601_1401 514a052bbe24f44530dbc10d40f75e85 249 TIGRFAM TIGR02429 pcaI_scoA_fam: 3-oxoacid CoA-transferase, A subunit 3 237 1.5E-69 T 12-10-2018 IPR012792 3-oxoacid CoA-transferase, subunit A GO:0008410 Reactome: R-HSA-77108 JDM601_1401 514a052bbe24f44530dbc10d40f75e85 249 SMART SM00882 7 236 2.3E-85 T 12-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 JDM601_1401 514a052bbe24f44530dbc10d40f75e85 249 Gene3D G3DSA:3.40.1080.10 3 235 1.0E-97 T 12-10-2018 JDM601_3394 d1ea24bc1b66bfeeb8523e50cf9fc239 249 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 90 110 - T 12-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 JDM601_3394 d1ea24bc1b66bfeeb8523e50cf9fc239 249 Gene3D G3DSA:1.10.12.10 192 249 7.2E-26 T 12-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal JDM601_3394 d1ea24bc1b66bfeeb8523e50cf9fc239 249 SUPERFAMILY SSF52096 1 248 2.03E-74 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily JDM601_3394 d1ea24bc1b66bfeeb8523e50cf9fc239 249 Pfam PF00378 Enoyl-CoA hydratase/isomerase 10 248 6.0E-49 T 12-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 JDM601_3394 d1ea24bc1b66bfeeb8523e50cf9fc239 249 Gene3D G3DSA:3.90.226.10 1 191 2.0E-69 T 12-10-2018 JDM601_2665 ee2694c17f005e736d7eb42e3001cba0 219 SUPERFAMILY SSF46689 13 95 1.42E-19 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JDM601_2665 ee2694c17f005e736d7eb42e3001cba0 219 Gene3D G3DSA:1.10.357.10 6 200 7.5E-30 T 12-10-2018 JDM601_2665 ee2694c17f005e736d7eb42e3001cba0 219 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 46 69 2.3E-11 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_2665 ee2694c17f005e736d7eb42e3001cba0 219 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 25 38 2.3E-11 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_2665 ee2694c17f005e736d7eb42e3001cba0 219 Pfam PF00440 Bacterial regulatory proteins, tetR family 25 71 9.3E-17 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_2082 061ac16353bae77470bb9d5ee6b3def3 932 Gene3D G3DSA:3.30.499.20 10 371 4.4E-155 T 12-10-2018 JDM601_2082 061ac16353bae77470bb9d5ee6b3def3 932 Gene3D G3DSA:3.20.19.10 695 932 1.8E-99 T 12-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 JDM601_2082 061ac16353bae77470bb9d5ee6b3def3 932 SUPERFAMILY SSF53732 8 668 1.23E-219 T 12-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 JDM601_2082 061ac16353bae77470bb9d5ee6b3def3 932 Pfam PF00694 Aconitase C-terminal domain 733 862 9.0E-41 T 12-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 JDM601_2082 061ac16353bae77470bb9d5ee6b3def3 932 Pfam PF00330 Aconitase family (aconitate hydratase) 68 603 2.2E-176 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 JDM601_2082 061ac16353bae77470bb9d5ee6b3def3 932 ProSitePatterns PS01244 Aconitase family signature 2. 534 547 - T 12-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 JDM601_2082 061ac16353bae77470bb9d5ee6b3def3 932 SUPERFAMILY SSF52016 672 931 5.69E-83 T 12-10-2018 JDM601_2082 061ac16353bae77470bb9d5ee6b3def3 932 PRINTS PR00415 Aconitase family signature 145 158 4.8E-43 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 JDM601_2082 061ac16353bae77470bb9d5ee6b3def3 932 PRINTS PR00415 Aconitase family signature 169 177 4.8E-43 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 JDM601_2082 061ac16353bae77470bb9d5ee6b3def3 932 PRINTS PR00415 Aconitase family signature 292 305 4.8E-43 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 JDM601_2082 061ac16353bae77470bb9d5ee6b3def3 932 PRINTS PR00415 Aconitase family signature 534 547 4.8E-43 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 JDM601_2082 061ac16353bae77470bb9d5ee6b3def3 932 PRINTS PR00415 Aconitase family signature 472 483 4.8E-43 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 JDM601_2082 061ac16353bae77470bb9d5ee6b3def3 932 PRINTS PR00415 Aconitase family signature 216 231 4.8E-43 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 JDM601_2082 061ac16353bae77470bb9d5ee6b3def3 932 PRINTS PR00415 Aconitase family signature 202 215 4.8E-43 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 JDM601_2082 061ac16353bae77470bb9d5ee6b3def3 932 PRINTS PR00415 Aconitase family signature 278 291 4.8E-43 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 JDM601_2082 061ac16353bae77470bb9d5ee6b3def3 932 PRINTS PR00415 Aconitase family signature 371 385 4.8E-43 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 JDM601_2082 061ac16353bae77470bb9d5ee6b3def3 932 Gene3D G3DSA:3.30.499.10 438 631 2.3E-88 T 12-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 JDM601_2082 061ac16353bae77470bb9d5ee6b3def3 932 ProSitePatterns PS00450 Aconitase family signature 1. 468 484 - T 12-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 JDM601_2082 061ac16353bae77470bb9d5ee6b3def3 932 Gene3D G3DSA:1.10.1440.20 632 692 4.0E-21 T 12-10-2018 JDM601_1931 d444bd3f0da1e2d5a7a992c1ad2af333 358 SMART SM00116 229 278 17.0 T 12-10-2018 IPR000644 CBS domain JDM601_1931 d444bd3f0da1e2d5a7a992c1ad2af333 358 SMART SM00116 300 348 0.45 T 12-10-2018 IPR000644 CBS domain JDM601_1931 d444bd3f0da1e2d5a7a992c1ad2af333 358 Pfam PF01595 Domain of unknown function DUF21 9 202 9.2E-39 T 12-10-2018 IPR002550 CNNM, transmembrane domain JDM601_1931 d444bd3f0da1e2d5a7a992c1ad2af333 358 Pfam PF00571 CBS domain 298 345 3.0E-4 T 12-10-2018 IPR000644 CBS domain JDM601_1931 d444bd3f0da1e2d5a7a992c1ad2af333 358 Pfam PF00571 CBS domain 242 274 1.8E-4 T 12-10-2018 IPR000644 CBS domain JDM601_1931 d444bd3f0da1e2d5a7a992c1ad2af333 358 SUPERFAMILY SSF54631 208 356 3.78E-17 T 12-10-2018 JDM601_1931 d444bd3f0da1e2d5a7a992c1ad2af333 358 Gene3D G3DSA:3.10.580.10 199 356 2.0E-25 T 12-10-2018 JDM601_2779 d6ced5b0d0041d6268db03311693918f 383 Gene3D G3DSA:1.20.1250.20 182 382 1.4E-36 T 12-10-2018 JDM601_2779 d6ced5b0d0041d6268db03311693918f 383 Pfam PF07690 Major Facilitator Superfamily 2 333 4.0E-29 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 JDM601_2779 d6ced5b0d0041d6268db03311693918f 383 SUPERFAMILY SSF103473 3 375 6.8E-49 T 12-10-2018 IPR036259 MFS transporter superfamily JDM601_2779 d6ced5b0d0041d6268db03311693918f 383 Gene3D G3DSA:1.20.1250.20 1 171 6.0E-34 T 12-10-2018 JDM601_2444 dae1694357479cee4c2eb782094074e4 512 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 91 512 33.401 T 12-10-2018 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 JDM601_2444 dae1694357479cee4c2eb782094074e4 512 PRINTS PR00046 Major sigma-70 factor signature 303 316 4.1E-29 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 JDM601_2444 dae1694357479cee4c2eb782094074e4 512 PRINTS PR00046 Major sigma-70 factor signature 327 335 4.1E-29 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 JDM601_2444 dae1694357479cee4c2eb782094074e4 512 PRINTS PR00046 Major sigma-70 factor signature 451 463 4.1E-29 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 JDM601_2444 dae1694357479cee4c2eb782094074e4 512 PRINTS PR00046 Major sigma-70 factor signature 472 487 4.1E-29 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 JDM601_2444 dae1694357479cee4c2eb782094074e4 512 PRINTS PR00046 Major sigma-70 factor signature 487 498 4.1E-29 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 JDM601_2444 dae1694357479cee4c2eb782094074e4 512 Pfam PF04542 Sigma-70 region 2 279 348 1.9E-22 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 JDM601_2444 dae1694357479cee4c2eb782094074e4 512 Gene3D G3DSA:1.10.10.10 435 512 2.8E-31 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JDM601_2444 dae1694357479cee4c2eb782094074e4 512 SUPERFAMILY SSF88659 411 511 2.11E-26 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like JDM601_2444 dae1694357479cee4c2eb782094074e4 512 Pfam PF00140 Sigma-70 factor, region 1.2 210 243 3.6E-16 T 12-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 JDM601_2444 dae1694357479cee4c2eb782094074e4 512 Gene3D G3DSA:1.10.10.10 352 427 4.5E-32 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JDM601_2444 dae1694357479cee4c2eb782094074e4 512 Pfam PF04539 Sigma-70 region 3 358 433 5.9E-28 T 12-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 JDM601_2444 dae1694357479cee4c2eb782094074e4 512 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 275 511 1.3E-113 T 12-10-2018 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 JDM601_2444 dae1694357479cee4c2eb782094074e4 512 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 472 498 - T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 JDM601_2444 dae1694357479cee4c2eb782094074e4 512 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 275 500 9.7E-36 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 JDM601_2444 dae1694357479cee4c2eb782094074e4 512 Pfam PF04545 Sigma-70, region 4 447 500 2.7E-18 T 12-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 JDM601_2444 dae1694357479cee4c2eb782094074e4 512 SUPERFAMILY SSF88946 207 349 9.29E-54 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 JDM601_2444 dae1694357479cee4c2eb782094074e4 512 SUPERFAMILY SSF88659 352 425 4.67E-22 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like JDM601_2444 dae1694357479cee4c2eb782094074e4 512 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 303 316 - T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 JDM601_2444 dae1694357479cee4c2eb782094074e4 512 Gene3D G3DSA:1.10.601.10 246 351 2.0E-51 T 12-10-2018 JDM601_2444 dae1694357479cee4c2eb782094074e4 512 Gene3D G3DSA:1.10.601.10 208 245 3.7E-9 T 12-10-2018 JDM601_0164 09bbe7951eb75a6671b494c3fd9527b3 163 Gene3D G3DSA:1.10.260.40 85 149 3.4E-5 T 12-10-2018 JDM601_0164 09bbe7951eb75a6671b494c3fd9527b3 163 SUPERFAMILY SSF47413 94 146 1.84E-6 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 JDM601_0031 30ac47e829585a8733f31fd9289812f2 534 Gene3D G3DSA:3.40.50.12780 1 405 8.8E-72 T 12-10-2018 JDM601_0031 30ac47e829585a8733f31fd9289812f2 534 SUPERFAMILY SSF56801 11 511 1.83E-99 T 12-10-2018 JDM601_0031 30ac47e829585a8733f31fd9289812f2 534 Gene3D G3DSA:3.30.300.310 408 511 2.3E-21 T 12-10-2018 JDM601_0031 30ac47e829585a8733f31fd9289812f2 534 ProSitePatterns PS00455 Putative AMP-binding domain signature. 160 171 - T 12-10-2018 IPR020845 AMP-binding, conserved site JDM601_0031 30ac47e829585a8733f31fd9289812f2 534 Pfam PF00501 AMP-binding enzyme 16 412 1.1E-58 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 JDM601_0031 30ac47e829585a8733f31fd9289812f2 534 Pfam PF13193 AMP-binding enzyme C-terminal domain 422 498 1.8E-11 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain JDM601_0562 6b7d072f82a31cfb953674f10863a2cb 149 Gene3D G3DSA:2.30.110.10 9 144 3.6E-25 T 12-10-2018 IPR012349 FMN-binding split barrel GO:0048037 JDM601_0562 6b7d072f82a31cfb953674f10863a2cb 149 SUPERFAMILY SSF50475 10 148 3.37E-22 T 12-10-2018 JDM601_0562 6b7d072f82a31cfb953674f10863a2cb 149 Pfam PF12900 Pyridoxamine 5'-phosphate oxidase 14 102 3.6E-7 T 12-10-2018 IPR024747 Pyridoxamine 5'-phosphate oxidase-related JDM601_0476 9bc8bb03eefb6c2b167de5f583d950e5 186 SUPERFAMILY SSF69635 9 140 2.61E-26 T 12-10-2018 JDM601_0476 9bc8bb03eefb6c2b167de5f583d950e5 186 Gene3D G3DSA:3.30.1460.10 48 147 3.4E-5 T 12-10-2018 JDM601_0476 9bc8bb03eefb6c2b167de5f583d950e5 186 Pfam PF10722 Putative bacterial sensory transduction regulator 13 137 1.5E-23 T 12-10-2018 IPR019660 Putative sensory transduction regulator YbjN JDM601_1052 af4d4187d99f8f5eec02691f23990f62 191 Pfam PF14030 Protein of unknown function (DUF4245) 1 177 4.1E-51 T 12-10-2018 IPR025339 Protein of unknown function DUF4245 JDM601_3753 79e8f0acafef590929ef075e53fb9aca 280 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 275 2.7E-41 T 12-10-2018 JDM601_3753 79e8f0acafef590929ef075e53fb9aca 280 Gene3D G3DSA:3.40.50.720 1 280 1.9E-78 T 12-10-2018 JDM601_3753 79e8f0acafef590929ef075e53fb9aca 280 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 190 5.9E-26 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3753 79e8f0acafef590929ef075e53fb9aca 280 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 192 209 5.9E-26 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3753 79e8f0acafef590929ef075e53fb9aca 280 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 137 153 5.9E-26 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3753 79e8f0acafef590929ef075e53fb9aca 280 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 94 105 5.9E-26 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3753 79e8f0acafef590929ef075e53fb9aca 280 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 5.9E-26 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3753 79e8f0acafef590929ef075e53fb9aca 280 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 240 260 5.9E-26 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3753 79e8f0acafef590929ef075e53fb9aca 280 SUPERFAMILY SSF51735 1 278 2.94E-61 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_3753 79e8f0acafef590929ef075e53fb9aca 280 TIGRFAM TIGR03971 SDR_subfam_1: SDR family mycofactocin-dependent oxidoreductase 4 278 1.5E-104 T 12-10-2018 IPR023985 Mycofactocin-dependent oxidoreductase JDM601_1580 6e0c338ce5b9663b0e3206c666a20c2f 228 SUPERFAMILY SSF46689 4 78 8.21E-18 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JDM601_1580 6e0c338ce5b9663b0e3206c666a20c2f 228 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 1.1E-6 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_1580 6e0c338ce5b9663b0e3206c666a20c2f 228 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 1.1E-6 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_1580 6e0c338ce5b9663b0e3206c666a20c2f 228 SUPERFAMILY SSF48498 83 209 4.67E-13 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily JDM601_1580 6e0c338ce5b9663b0e3206c666a20c2f 228 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 62 4.2E-14 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_1580 6e0c338ce5b9663b0e3206c666a20c2f 228 Gene3D G3DSA:1.10.357.10 5 213 2.2E-35 T 12-10-2018 JDM601_1339 aa279929d8b10f1bc4d0b8e4d31fb669 362 Pfam PF03576 Peptidase family S58 6 339 1.1E-73 T 12-10-2018 IPR005321 Peptidase S58, DmpA JDM601_1339 aa279929d8b10f1bc4d0b8e4d31fb669 362 Gene3D G3DSA:3.60.70.12 2 347 1.1E-111 T 12-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 JDM601_1339 aa279929d8b10f1bc4d0b8e4d31fb669 362 SUPERFAMILY SSF56266 5 348 2.35E-77 T 12-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 JDM601_0196 b3f3c553eb25d64057f181e8a9bcca59 384 Gene3D G3DSA:3.40.50.2000 16 369 5.9E-57 T 12-10-2018 JDM601_0196 b3f3c553eb25d64057f181e8a9bcca59 384 Pfam PF13439 Glycosyltransferase Family 4 21 186 4.0E-17 T 12-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 JDM601_0196 b3f3c553eb25d64057f181e8a9bcca59 384 Pfam PF00534 Glycosyl transferases group 1 198 353 1.5E-31 T 12-10-2018 IPR001296 Glycosyl transferase, family 1 JDM601_0196 b3f3c553eb25d64057f181e8a9bcca59 384 Gene3D G3DSA:3.40.50.2000 184 355 5.9E-57 T 12-10-2018 JDM601_0196 b3f3c553eb25d64057f181e8a9bcca59 384 SUPERFAMILY SSF53756 7 375 2.43E-70 T 12-10-2018 JDM601_0207 ac58ba35cf9129971c83fe748dcc8ca7 197 Pfam PF00440 Bacterial regulatory proteins, tetR family 20 65 5.0E-16 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_0207 ac58ba35cf9129971c83fe748dcc8ca7 197 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 20 33 1.5E-8 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_0207 ac58ba35cf9129971c83fe748dcc8ca7 197 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 41 64 1.5E-8 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_0207 ac58ba35cf9129971c83fe748dcc8ca7 197 Gene3D G3DSA:1.10.357.10 18 194 7.7E-25 T 12-10-2018 JDM601_0207 ac58ba35cf9129971c83fe748dcc8ca7 197 SUPERFAMILY SSF46689 16 81 5.84E-16 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JDM601_4179 1d747f764e93776c8c35af6c0d38029e 151 Gene3D G3DSA:3.10.129.10 1 151 6.4E-53 T 12-10-2018 JDM601_4179 1d747f764e93776c8c35af6c0d38029e 151 Pfam PF01575 MaoC like domain 14 129 1.1E-30 T 12-10-2018 IPR002539 MaoC-like dehydratase domain JDM601_4179 1d747f764e93776c8c35af6c0d38029e 151 SUPERFAMILY SSF54637 3 148 2.14E-39 T 12-10-2018 IPR029069 HotDog domain superfamily JDM601_2886 e7963ff833ccfe34971d360e10008514 200 ProSitePatterns PS01081 TetR-type HTH domain signature. 39 70 - T 12-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site JDM601_2886 e7963ff833ccfe34971d360e10008514 200 SUPERFAMILY SSF48498 90 192 5.78E-5 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily JDM601_2886 e7963ff833ccfe34971d360e10008514 200 Gene3D G3DSA:1.10.357.10 69 200 4.3E-10 T 12-10-2018 JDM601_2886 e7963ff833ccfe34971d360e10008514 200 Gene3D G3DSA:1.10.10.60 5 68 1.8E-18 T 12-10-2018 JDM601_2886 e7963ff833ccfe34971d360e10008514 200 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 48 71 2.5E-10 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_2886 e7963ff833ccfe34971d360e10008514 200 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 27 40 2.5E-10 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_2886 e7963ff833ccfe34971d360e10008514 200 Pfam PF00440 Bacterial regulatory proteins, tetR family 27 73 9.9E-17 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_2886 e7963ff833ccfe34971d360e10008514 200 SUPERFAMILY SSF46689 15 82 1.85E-18 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JDM601_2011 58b27eb6ed8ddb74aad81be1ab0f3f1e 386 Pfam PF00823 PPE family 5 161 3.8E-62 T 12-10-2018 IPR000030 PPE family JDM601_2011 58b27eb6ed8ddb74aad81be1ab0f3f1e 386 SUPERFAMILY SSF140459 2 174 1.73E-64 T 12-10-2018 JDM601_2011 58b27eb6ed8ddb74aad81be1ab0f3f1e 386 Pfam PF12484 Polymorphic PE/PPE proteins C terminal 302 381 1.9E-15 T 12-10-2018 IPR022171 PPE family, C-terminal JDM601_2011 58b27eb6ed8ddb74aad81be1ab0f3f1e 386 Gene3D G3DSA:1.20.1260.20 1 174 5.7E-69 T 12-10-2018 IPR038332 PPE superfamily JDM601_4229 1015cee27928eb0e0afa5edccdc76b2b 168 Gene3D G3DSA:3.10.450.50 3 155 4.0E-32 T 12-10-2018 JDM601_4229 1015cee27928eb0e0afa5edccdc76b2b 168 Pfam PF13577 SnoaL-like domain 14 138 1.3E-21 T 12-10-2018 IPR037401 SnoaL-like domain JDM601_4229 1015cee27928eb0e0afa5edccdc76b2b 168 SUPERFAMILY SSF54427 6 145 4.79E-28 T 12-10-2018 IPR032710 NTF2-like domain superfamily JDM601_3446 cbe991b4d2e61eacdb3f8ae498de9a94 203 Gene3D G3DSA:1.10.357.10 3 199 4.3E-35 T 12-10-2018 JDM601_3446 cbe991b4d2e61eacdb3f8ae498de9a94 203 Pfam PF00440 Bacterial regulatory proteins, tetR family 18 64 7.0E-18 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_3446 cbe991b4d2e61eacdb3f8ae498de9a94 203 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 39 62 1.3E-11 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_3446 cbe991b4d2e61eacdb3f8ae498de9a94 203 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 18 31 1.3E-11 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_3446 cbe991b4d2e61eacdb3f8ae498de9a94 203 SUPERFAMILY SSF48498 95 192 6.12E-7 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily JDM601_3446 cbe991b4d2e61eacdb3f8ae498de9a94 203 SUPERFAMILY SSF46689 5 79 1.54E-21 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JDM601_0675 b6728789d8ce4e5a10dc8f894ac2d142 111 Pfam PF01638 HxlR-like helix-turn-helix 19 107 9.2E-29 T 12-10-2018 IPR002577 Helix-turn-helix, HxlR type JDM601_0675 b6728789d8ce4e5a10dc8f894ac2d142 111 Gene3D G3DSA:1.10.10.10 5 110 3.0E-35 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JDM601_0675 b6728789d8ce4e5a10dc8f894ac2d142 111 SUPERFAMILY SSF46785 10 107 5.66E-30 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JDM601_1241 1fc32b81d7c1637977e55b48766ee020 137 SUPERFAMILY SSF46785 26 119 1.21E-15 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JDM601_1241 1fc32b81d7c1637977e55b48766ee020 137 Gene3D G3DSA:1.10.10.10 10 132 1.7E-17 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JDM601_1241 1fc32b81d7c1637977e55b48766ee020 137 SMART SM00347 32 134 0.002 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 JDM601_1241 1fc32b81d7c1637977e55b48766ee020 137 Pfam PF12802 MarR family 38 97 1.8E-8 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 JDM601_0857 eef8bccf989da351d278baa7308406ad 129 Pfam PF12840 Helix-turn-helix domain 32 89 1.0E-8 T 12-10-2018 JDM601_0857 eef8bccf989da351d278baa7308406ad 129 Gene3D G3DSA:1.10.10.10 10 118 2.9E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JDM601_0857 eef8bccf989da351d278baa7308406ad 129 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 80 95 2.6E-8 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 JDM601_0857 eef8bccf989da351d278baa7308406ad 129 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 33 48 2.6E-8 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 JDM601_0857 eef8bccf989da351d278baa7308406ad 129 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 65 80 2.6E-8 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 JDM601_0857 eef8bccf989da351d278baa7308406ad 129 SUPERFAMILY SSF46785 21 110 3.2E-20 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JDM601_0857 eef8bccf989da351d278baa7308406ad 129 SMART SM00418 31 109 2.1E-13 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 JDM601_0151 d3367fa266c39500f1f27e416909b31b 287 PRINTS PR00111 Alpha/beta hydrolase fold signature 226 240 3.7E-9 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 JDM601_0151 d3367fa266c39500f1f27e416909b31b 287 PRINTS PR00111 Alpha/beta hydrolase fold signature 65 80 3.7E-9 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 JDM601_0151 d3367fa266c39500f1f27e416909b31b 287 PRINTS PR00111 Alpha/beta hydrolase fold signature 128 141 3.7E-9 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 JDM601_0151 d3367fa266c39500f1f27e416909b31b 287 PRINTS PR00111 Alpha/beta hydrolase fold signature 114 127 3.7E-9 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 JDM601_0151 d3367fa266c39500f1f27e416909b31b 287 Gene3D G3DSA:3.40.50.1820 7 287 2.4E-74 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_0151 d3367fa266c39500f1f27e416909b31b 287 SUPERFAMILY SSF53474 16 286 6.38E-45 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_0151 d3367fa266c39500f1f27e416909b31b 287 Pfam PF12146 Serine aminopeptidase, S33 36 271 1.3E-76 T 12-10-2018 IPR022742 Serine aminopeptidase, S33 JDM601_2469 708e873a434755dded024c5b0433f26a 306 SUPERFAMILY SSF52540 4 149 3.47E-15 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_2469 708e873a434755dded024c5b0433f26a 306 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 4 289 9.7E-66 T 12-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 JDM601_2469 708e873a434755dded024c5b0433f26a 306 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 3 300 24.976 T 12-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 JDM601_2469 708e873a434755dded024c5b0433f26a 306 Gene3D G3DSA:3.40.50.300 7 288 8.0E-79 T 12-10-2018 JDM601_2469 708e873a434755dded024c5b0433f26a 306 Gene3D G3DSA:1.10.20.140 115 185 8.0E-79 T 12-10-2018 JDM601_2469 708e873a434755dded024c5b0433f26a 306 SUPERFAMILY SSF52540 2 277 1.82E-5 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_2469 708e873a434755dded024c5b0433f26a 306 Pfam PF01715 IPP transferase 41 284 9.9E-65 T 12-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 JDM601_0391 5278d8c88218248fca82d090b2e051db 379 Gene3D G3DSA:1.10.357.10 24 165 2.7E-15 T 12-10-2018 JDM601_0391 5278d8c88218248fca82d090b2e051db 379 Gene3D G3DSA:1.10.357.10 233 375 9.8E-23 T 12-10-2018 JDM601_0391 5278d8c88218248fca82d090b2e051db 379 Pfam PF00440 Bacterial regulatory proteins, tetR family 1 27 2.6E-6 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_0391 5278d8c88218248fca82d090b2e051db 379 Pfam PF00440 Bacterial regulatory proteins, tetR family 192 235 3.4E-12 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_0391 5278d8c88218248fca82d090b2e051db 379 SUPERFAMILY SSF46689 186 263 4.72E-14 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JDM601_0391 5278d8c88218248fca82d090b2e051db 379 Gene3D G3DSA:1.10.10.60 189 232 1.6E-12 T 12-10-2018 JDM601_0391 5278d8c88218248fca82d090b2e051db 379 Gene3D G3DSA:1.10.10.60 1 23 3.2E-5 T 12-10-2018 JDM601_0391 5278d8c88218248fca82d090b2e051db 379 SUPERFAMILY SSF46689 1 40 2.59E-6 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JDM601_0391 5278d8c88218248fca82d090b2e051db 379 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 192 205 2.7E-7 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_0391 5278d8c88218248fca82d090b2e051db 379 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 213 236 2.7E-7 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_0598 001ab720d5e3e1309fe0cb0779714e18 1531 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 1001 1025 2.9E-7 T 12-10-2018 JDM601_0598 001ab720d5e3e1309fe0cb0779714e18 1531 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 520 536 2.9E-7 T 12-10-2018 JDM601_0598 001ab720d5e3e1309fe0cb0779714e18 1531 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 558 572 2.9E-7 T 12-10-2018 JDM601_0598 001ab720d5e3e1309fe0cb0779714e18 1531 SUPERFAMILY SSF53335 288 1059 1.07E-40 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JDM601_0598 001ab720d5e3e1309fe0cb0779714e18 1531 Gene3D G3DSA:3.40.50.150 505 675 4.9E-19 T 12-10-2018 JDM601_3810 2004c027faa1a13d732f1d1cb77cd223 394 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 135 229 1.0E-18 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 JDM601_3810 2004c027faa1a13d732f1d1cb77cd223 394 Gene3D G3DSA:2.40.110.10 135 245 1.3E-33 T 12-10-2018 JDM601_3810 2004c027faa1a13d732f1d1cb77cd223 394 Gene3D G3DSA:1.10.540.10 12 130 2.8E-28 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 JDM601_3810 2004c027faa1a13d732f1d1cb77cd223 394 Gene3D G3DSA:1.20.140.10 246 394 1.8E-31 T 12-10-2018 JDM601_3810 2004c027faa1a13d732f1d1cb77cd223 394 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 17 131 9.7E-22 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 JDM601_3810 2004c027faa1a13d732f1d1cb77cd223 394 SUPERFAMILY SSF56645 11 252 9.03E-70 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 JDM601_3810 2004c027faa1a13d732f1d1cb77cd223 394 SUPERFAMILY SSF47203 241 390 1.5E-21 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 JDM601_3810 2004c027faa1a13d732f1d1cb77cd223 394 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 241 388 1.7E-24 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 JDM601_1730 45b479447f54c4ef04deaf8343562887 301 Gene3D G3DSA:3.20.20.220 2 294 3.5E-33 T 12-10-2018 JDM601_1011 7bb5555336675babe7fa246c90292641 277 Pfam PF01734 Patatin-like phospholipase 1 196 1.0E-10 T 12-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 JDM601_1011 7bb5555336675babe7fa246c90292641 277 SUPERFAMILY SSF52151 1 203 7.06E-25 T 12-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase JDM601_1011 7bb5555336675babe7fa246c90292641 277 Gene3D G3DSA:3.40.1090.10 115 221 1.2E-14 T 12-10-2018 JDM601_0682 63f33f6c5ab959ffc33a26b06aa34e35 1155 Gene3D G3DSA:2.40.50.150 731 857 0.0 T 12-10-2018 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JDM601_0682 63f33f6c5ab959ffc33a26b06aa34e35 1155 Pfam PF04565 RNA polymerase Rpb2, domain 3 415 483 5.1E-29 T 12-10-2018 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JDM601_0682 63f33f6c5ab959ffc33a26b06aa34e35 1155 Gene3D G3DSA:2.30.150.10 496 563 0.0 T 12-10-2018 JDM601_0682 63f33f6c5ab959ffc33a26b06aa34e35 1155 Pfam PF00562 RNA polymerase Rpb2, domain 6 620 1039 3.3E-158 T 12-10-2018 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JDM601_0682 63f33f6c5ab959ffc33a26b06aa34e35 1155 ProSitePatterns PS01166 RNA polymerases beta chain signature. 859 871 - T 12-10-2018 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JDM601_0682 63f33f6c5ab959ffc33a26b06aa34e35 1155 Gene3D G3DSA:3.90.1100.10 13 620 0.0 T 12-10-2018 JDM601_0682 63f33f6c5ab959ffc33a26b06aa34e35 1155 Pfam PF04563 RNA polymerase beta subunit 73 400 2.6E-22 T 12-10-2018 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JDM601_0682 63f33f6c5ab959ffc33a26b06aa34e35 1155 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 8 1117 12.262 T 12-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JDM601_0682 63f33f6c5ab959ffc33a26b06aa34e35 1155 Pfam PF04561 RNA polymerase Rpb2, domain 2 150 321 1.3E-20 T 12-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JDM601_0682 63f33f6c5ab959ffc33a26b06aa34e35 1155 Pfam PF04560 RNA polymerase Rpb2, domain 7 1041 1115 5.8E-26 T 12-10-2018 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JDM601_0682 63f33f6c5ab959ffc33a26b06aa34e35 1155 SUPERFAMILY SSF64484 7 1125 0.0 T 12-10-2018 JDM601_0682 63f33f6c5ab959ffc33a26b06aa34e35 1155 Pfam PF10385 RNA polymerase beta subunit external 1 domain 493 559 1.5E-26 T 12-10-2018 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JDM601_0682 63f33f6c5ab959ffc33a26b06aa34e35 1155 Gene3D G3DSA:3.90.1800.10 1026 1080 8.7E-11 T 12-10-2018 JDM601_0682 63f33f6c5ab959ffc33a26b06aa34e35 1155 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 220 833 0.0 T 12-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JDM601_0682 63f33f6c5ab959ffc33a26b06aa34e35 1155 Gene3D G3DSA:3.90.1110.10 155 350 0.0 T 12-10-2018 IPR037034 RNA polymerase Rpb2, domain 2 superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JDM601_0682 63f33f6c5ab959ffc33a26b06aa34e35 1155 Gene3D G3DSA:2.40.50.100 621 695 0.0 T 12-10-2018 JDM601_0682 63f33f6c5ab959ffc33a26b06aa34e35 1155 Gene3D G3DSA:2.40.270.10 11 1017 0.0 T 12-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JDM601_3202 b749dfc09d77c3e33f5c61ccf1116f7a 154 Gene3D G3DSA:3.40.1280.10 1 154 3.2E-53 T 12-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal JDM601_3202 b749dfc09d77c3e33f5c61ccf1116f7a 154 Pfam PF00588 SpoU rRNA Methylase family 4 142 6.3E-28 T 12-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 JDM601_3202 b749dfc09d77c3e33f5c61ccf1116f7a 154 SUPERFAMILY SSF75217 4 152 1.96E-39 T 12-10-2018 IPR029028 Alpha/beta knot methyltransferases JDM601_3202 b749dfc09d77c3e33f5c61ccf1116f7a 154 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 2 151 29.462 T 12-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 JDM601_3202 b749dfc09d77c3e33f5c61ccf1116f7a 154 PIRSF PIRSF029256 1 154 7.8E-55 T 12-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 JDM601_1174 999d25ee3a730d11d30af5ae5a322416 225 SUPERFAMILY SSF48498 84 189 2.62E-11 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily JDM601_1174 999d25ee3a730d11d30af5ae5a322416 225 Pfam PF00440 Bacterial regulatory proteins, tetR family 21 65 1.2E-13 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_1174 999d25ee3a730d11d30af5ae5a322416 225 SUPERFAMILY SSF46689 7 88 2.44E-18 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JDM601_1174 999d25ee3a730d11d30af5ae5a322416 225 Gene3D G3DSA:1.10.357.10 4 196 5.2E-52 T 12-10-2018 JDM601_1174 999d25ee3a730d11d30af5ae5a322416 225 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 40 63 3.6E-10 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_1174 999d25ee3a730d11d30af5ae5a322416 225 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 20 33 3.6E-10 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_2813 6b41538ba531e9f10869da2f2223e5fe 432 Pfam PF00083 Sugar (and other) transporter 235 375 4.5E-5 T 12-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 JDM601_2813 6b41538ba531e9f10869da2f2223e5fe 432 PRINTS PR01035 Tetracycline resistance protein signature 7 23 3.2E-9 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 JDM601_2813 6b41538ba531e9f10869da2f2223e5fe 432 PRINTS PR01035 Tetracycline resistance protein signature 261 282 3.2E-9 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 JDM601_2813 6b41538ba531e9f10869da2f2223e5fe 432 PRINTS PR01035 Tetracycline resistance protein signature 122 144 3.2E-9 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 JDM601_2813 6b41538ba531e9f10869da2f2223e5fe 432 Gene3D G3DSA:1.20.1250.20 1 177 1.8E-28 T 12-10-2018 JDM601_2813 6b41538ba531e9f10869da2f2223e5fe 432 SUPERFAMILY SSF103473 3 378 3.14E-66 T 12-10-2018 IPR036259 MFS transporter superfamily JDM601_2813 6b41538ba531e9f10869da2f2223e5fe 432 Pfam PF07690 Major Facilitator Superfamily 2 224 2.0E-26 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 JDM601_2813 6b41538ba531e9f10869da2f2223e5fe 432 Gene3D G3DSA:1.20.1250.20 185 378 1.3E-27 T 12-10-2018 JDM601_0933 466f5b1aef6ebb89c13e35979d56c612 484 SMART SM00387 351 466 7.8E-33 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JDM601_0933 466f5b1aef6ebb89c13e35979d56c612 484 SMART SM00388 239 311 9.4E-13 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JDM601_0933 466f5b1aef6ebb89c13e35979d56c612 484 SMART SM00304 186 238 3.5E-13 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JDM601_0933 466f5b1aef6ebb89c13e35979d56c612 484 Gene3D G3DSA:1.10.287.130 190 313 1.8E-24 T 12-10-2018 JDM601_0933 466f5b1aef6ebb89c13e35979d56c612 484 Gene3D G3DSA:3.30.565.10 314 469 1.5E-34 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JDM601_0933 466f5b1aef6ebb89c13e35979d56c612 484 SUPERFAMILY SSF55874 301 463 2.62E-34 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JDM601_0933 466f5b1aef6ebb89c13e35979d56c612 484 Pfam PF00512 His Kinase A (phospho-acceptor) domain 240 309 8.0E-13 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JDM601_0933 466f5b1aef6ebb89c13e35979d56c612 484 SUPERFAMILY SSF158472 189 235 5.36E-7 T 12-10-2018 JDM601_0933 466f5b1aef6ebb89c13e35979d56c612 484 PRINTS PR00344 Bacterial sensor protein C-terminal signature 450 463 1.3E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JDM601_0933 466f5b1aef6ebb89c13e35979d56c612 484 PRINTS PR00344 Bacterial sensor protein C-terminal signature 389 403 1.3E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JDM601_0933 466f5b1aef6ebb89c13e35979d56c612 484 PRINTS PR00344 Bacterial sensor protein C-terminal signature 407 417 1.3E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JDM601_0933 466f5b1aef6ebb89c13e35979d56c612 484 PRINTS PR00344 Bacterial sensor protein C-terminal signature 422 440 1.3E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JDM601_0933 466f5b1aef6ebb89c13e35979d56c612 484 Pfam PF00672 HAMP domain 186 234 5.7E-13 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JDM601_0933 466f5b1aef6ebb89c13e35979d56c612 484 SUPERFAMILY SSF47384 222 309 3.14E-13 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 JDM601_0933 466f5b1aef6ebb89c13e35979d56c612 484 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 351 463 1.5E-19 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JDM601_1922 862451c526c2303e3a97beed40adbe50 168 SMART SM00240 83 133 3.0E-15 T 12-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 JDM601_1922 862451c526c2303e3a97beed40adbe50 168 SUPERFAMILY SSF49879 58 155 5.36E-31 T 12-10-2018 IPR008984 SMAD/FHA domain superfamily GO:0005515 JDM601_1922 862451c526c2303e3a97beed40adbe50 168 Gene3D G3DSA:2.60.200.20 31 164 2.1E-41 T 12-10-2018 JDM601_1922 862451c526c2303e3a97beed40adbe50 168 Pfam PF00498 FHA domain 87 147 4.9E-18 T 12-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 JDM601_2199 8fae16f98a3338d6a1a3a9a74dc7c300 276 Pfam PF00106 short chain dehydrogenase 5 191 2.9E-45 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2199 8fae16f98a3338d6a1a3a9a74dc7c300 276 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 74 85 2.4E-6 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2199 8fae16f98a3338d6a1a3a9a74dc7c300 276 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 127 135 2.4E-6 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2199 8fae16f98a3338d6a1a3a9a74dc7c300 276 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 147 166 2.4E-6 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2199 8fae16f98a3338d6a1a3a9a74dc7c300 276 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 74 85 8.9E-21 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2199 8fae16f98a3338d6a1a3a9a74dc7c300 276 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 168 185 8.9E-21 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2199 8fae16f98a3338d6a1a3a9a74dc7c300 276 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 8.9E-21 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2199 8fae16f98a3338d6a1a3a9a74dc7c300 276 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 121 137 8.9E-21 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2199 8fae16f98a3338d6a1a3a9a74dc7c300 276 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 147 166 8.9E-21 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2199 8fae16f98a3338d6a1a3a9a74dc7c300 276 Gene3D G3DSA:3.40.50.720 3 263 7.0E-67 T 12-10-2018 JDM601_2199 8fae16f98a3338d6a1a3a9a74dc7c300 276 SUPERFAMILY SSF51735 5 255 4.54E-62 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_2199 8fae16f98a3338d6a1a3a9a74dc7c300 276 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 5 178 9.8E-5 T 12-10-2018 JDM601_2582 4738e818cd0bcebcaac2cb105a7b1eb4 579 ProSitePatterns PS00455 Putative AMP-binding domain signature. 169 180 - T 12-10-2018 IPR020845 AMP-binding, conserved site JDM601_2582 4738e818cd0bcebcaac2cb105a7b1eb4 579 Gene3D G3DSA:3.40.50.12780 6 459 8.3E-160 T 12-10-2018 JDM601_2582 4738e818cd0bcebcaac2cb105a7b1eb4 579 Gene3D G3DSA:3.30.300.30 461 578 3.5E-33 T 12-10-2018 JDM601_2582 4738e818cd0bcebcaac2cb105a7b1eb4 579 Pfam PF00501 AMP-binding enzyme 13 466 1.9E-79 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 JDM601_2582 4738e818cd0bcebcaac2cb105a7b1eb4 579 SUPERFAMILY SSF56801 6 570 5.36E-100 T 12-10-2018 JDM601_0010 e97105d1a32c1bacfa0061a6f525fd3b 176 Gene3D G3DSA:2.40.100.10 6 176 1.3E-76 T 12-10-2018 IPR029000 Cyclophilin-like domain superfamily JDM601_0010 e97105d1a32c1bacfa0061a6f525fd3b 176 SUPERFAMILY SSF50891 9 175 2.78E-63 T 12-10-2018 IPR029000 Cyclophilin-like domain superfamily JDM601_0010 e97105d1a32c1bacfa0061a6f525fd3b 176 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 60 77 - T 12-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 JDM601_0010 e97105d1a32c1bacfa0061a6f525fd3b 176 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 11 175 5.4E-48 T 12-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 JDM601_0010 e97105d1a32c1bacfa0061a6f525fd3b 176 PIRSF PIRSF001467 1 176 1.1E-58 T 12-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 JDM601_0010 e97105d1a32c1bacfa0061a6f525fd3b 176 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 133 148 2.6E-25 T 12-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 JDM601_0010 e97105d1a32c1bacfa0061a6f525fd3b 176 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 24 39 2.6E-25 T 12-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 JDM601_0010 e97105d1a32c1bacfa0061a6f525fd3b 176 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 120 132 2.6E-25 T 12-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 JDM601_0010 e97105d1a32c1bacfa0061a6f525fd3b 176 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 65 77 2.6E-25 T 12-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 JDM601_0010 e97105d1a32c1bacfa0061a6f525fd3b 176 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 105 120 2.6E-25 T 12-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 JDM601_1876 473c9c5f1ce93dd89e5a7c1ca7bbcdee 788 Pfam PF05970 PIF1-like helicase 22 196 4.0E-25 T 12-10-2018 IPR010285 DNA helicase Pif1-like GO:0000723|GO:0003678|GO:0006281 JDM601_1876 473c9c5f1ce93dd89e5a7c1ca7bbcdee 788 SUPERFAMILY SSF52540 135 430 9.29E-39 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_1876 473c9c5f1ce93dd89e5a7c1ca7bbcdee 788 SUPERFAMILY SSF52540 10 192 5.16E-23 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_1876 473c9c5f1ce93dd89e5a7c1ca7bbcdee 788 Gene3D G3DSA:3.40.50.300 349 422 1.4E-6 T 12-10-2018 JDM601_1876 473c9c5f1ce93dd89e5a7c1ca7bbcdee 788 Gene3D G3DSA:3.40.50.10190 705 788 1.7E-9 T 12-10-2018 IPR036420 BRCT domain superfamily JDM601_1876 473c9c5f1ce93dd89e5a7c1ca7bbcdee 788 Gene3D G3DSA:3.40.50.300 2 207 2.3E-32 T 12-10-2018 JDM601_4223 479605c2ff98bbca97902cba41a675c0 286 Gene3D G3DSA:3.30.450.40 65 175 2.8E-6 T 12-10-2018 IPR029016 GAF-like domain superfamily JDM601_4223 479605c2ff98bbca97902cba41a675c0 286 SUPERFAMILY SSF46785 3 68 1.11E-10 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JDM601_4223 479605c2ff98bbca97902cba41a675c0 286 Pfam PF09339 IclR helix-turn-helix domain 3 49 1.9E-7 T 12-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 JDM601_4223 479605c2ff98bbca97902cba41a675c0 286 SUPERFAMILY SSF55781 54 173 2.09E-8 T 12-10-2018 JDM601_4223 479605c2ff98bbca97902cba41a675c0 286 SMART SM00346 1 86 5.7E-7 T 12-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 JDM601_4223 479605c2ff98bbca97902cba41a675c0 286 Gene3D G3DSA:1.10.10.10 1 64 3.0E-14 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JDM601_2124 678ecb5d0bcd13cf15ed0ed3e3baeb29 413 SUPERFAMILY SSF53474 151 389 3.24E-49 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_2124 678ecb5d0bcd13cf15ed0ed3e3baeb29 413 Gene3D G3DSA:3.40.50.1820 157 406 1.3E-57 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_2124 678ecb5d0bcd13cf15ed0ed3e3baeb29 413 Pfam PF07859 alpha/beta hydrolase fold 176 383 1.5E-20 T 12-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 JDM601_3508 760919711d4d17662349dc7dcc7eff15 268 Gene3D G3DSA:1.20.140.10 120 256 1.0E-26 T 12-10-2018 JDM601_3508 760919711d4d17662349dc7dcc7eff15 268 SUPERFAMILY SSF47203 122 256 3.38E-28 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 JDM601_3508 760919711d4d17662349dc7dcc7eff15 268 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 122 251 9.0E-19 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 JDM601_0209 608275174ac99980c62ed1443b017ca5 179 Pfam PF00440 Bacterial regulatory proteins, tetR family 8 44 3.7E-6 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_0209 608275174ac99980c62ed1443b017ca5 179 SUPERFAMILY SSF46689 5 64 4.46E-9 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JDM601_0209 608275174ac99980c62ed1443b017ca5 179 Gene3D G3DSA:1.10.357.10 2 177 4.6E-20 T 12-10-2018 JDM601_2614 88e4aa0e72341e210e3871ec00f96689 299 SUPERFAMILY SSF56349 3 290 1.35E-50 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 JDM601_2614 88e4aa0e72341e210e3871ec00f96689 299 Gene3D G3DSA:1.10.150.130 3 97 3.4E-19 T 12-10-2018 IPR010998 Integrase/recombinase, N-terminal JDM601_2614 88e4aa0e72341e210e3871ec00f96689 299 Gene3D G3DSA:1.10.443.10 110 293 3.7E-56 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 JDM601_2614 88e4aa0e72341e210e3871ec00f96689 299 Pfam PF00589 Phage integrase family 110 284 2.3E-45 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 JDM601_2614 88e4aa0e72341e210e3871ec00f96689 299 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 3 299 54.554 T 12-10-2018 IPR023009 Tyrosine recombinase XerC/XerD JDM601_2614 88e4aa0e72341e210e3871ec00f96689 299 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 5 88 2.2E-20 T 12-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 JDM601_2748 a62ba9953f15eec45e2cbfeff59aea3f 318 SUPERFAMILY SSF52467 191 312 3.52E-47 T 12-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily JDM601_2748 a62ba9953f15eec45e2cbfeff59aea3f 318 PIRSF PIRSF000089 1 318 3.5E-103 T 12-10-2018 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 Reactome: R-HSA-611105 JDM601_2748 a62ba9953f15eec45e2cbfeff59aea3f 318 SMART SM00893 4 193 6.6E-29 T 12-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 JDM601_2748 a62ba9953f15eec45e2cbfeff59aea3f 318 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 194 276 2.5E-35 T 12-10-2018 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal Reactome: R-HSA-611105 JDM601_2748 a62ba9953f15eec45e2cbfeff59aea3f 318 SUPERFAMILY SSF52402 4 185 6.98E-40 T 12-10-2018 JDM601_2748 a62ba9953f15eec45e2cbfeff59aea3f 318 Gene3D G3DSA:3.40.50.620 2 185 4.3E-36 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JDM601_2748 a62ba9953f15eec45e2cbfeff59aea3f 318 Pfam PF01012 Electron transfer flavoprotein domain 4 174 6.3E-32 T 12-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 JDM601_2748 a62ba9953f15eec45e2cbfeff59aea3f 318 Gene3D G3DSA:3.40.50.1220 188 318 7.1E-56 T 12-10-2018 JDM601_4065 eb218c5ab5ab117baa7965e5a90f1168 79 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 6 44 1.4E-9 T 12-10-2018 JDM601_4065 eb218c5ab5ab117baa7965e5a90f1168 79 SUPERFAMILY SSF143120 4 44 7.32E-10 T 12-10-2018 IPR036165 YefM-like superfamily JDM601_4065 eb218c5ab5ab117baa7965e5a90f1168 79 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 4 44 1.9E-12 T 12-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM JDM601_4065 eb218c5ab5ab117baa7965e5a90f1168 79 Gene3D G3DSA:3.40.1620.10 2 41 3.2E-11 T 12-10-2018 JDM601_2024 5c49771b025107d3af335f18ebf55897 154 Hamap MF_00269 Thiol peroxidase [tpx]. 1 154 33.947 T 12-10-2018 IPR002065 Thiol peroxidase Tpx GO:0008379|GO:0016209|GO:0055114 KEGG: 00480+1.11.1.15 JDM601_2024 5c49771b025107d3af335f18ebf55897 154 Gene3D G3DSA:3.40.30.10 1 154 2.1E-43 T 12-10-2018 JDM601_2024 5c49771b025107d3af335f18ebf55897 154 Pfam PF08534 Redoxin 10 150 5.8E-27 T 12-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 JDM601_2024 5c49771b025107d3af335f18ebf55897 154 ProSitePatterns PS01265 Tpx family signature. 72 83 - T 12-10-2018 IPR018219 Thiol peroxidase conserved site GO:0016684|GO:0055114 KEGG: 00480+1.11.1.15 JDM601_2024 5c49771b025107d3af335f18ebf55897 154 SUPERFAMILY SSF52833 2 151 7.65E-40 T 12-10-2018 IPR036249 Thioredoxin-like superfamily JDM601_4299 3453ccc5f1e17ef4a99ed6b6beb25f01 283 SUPERFAMILY SSF53474 52 262 6.55E-27 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_4299 3453ccc5f1e17ef4a99ed6b6beb25f01 283 Pfam PF12697 Alpha/beta hydrolase family 70 231 1.9E-10 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 JDM601_4299 3453ccc5f1e17ef4a99ed6b6beb25f01 283 Gene3D G3DSA:3.40.50.1820 52 270 1.4E-25 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_1408 272289cf382ddeef2d6ec62e3fb76b4d 394 SMART SM00922 165 262 1.1E-15 T 12-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal JDM601_1408 272289cf382ddeef2d6ec62e3fb76b4d 394 Gene3D G3DSA:3.20.20.120 128 388 1.4E-56 T 12-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily JDM601_1408 272289cf382ddeef2d6ec62e3fb76b4d 394 SUPERFAMILY SSF54826 1 137 1.85E-21 T 12-10-2018 JDM601_1408 272289cf382ddeef2d6ec62e3fb76b4d 394 Pfam PF13378 Enolase C-terminal domain-like 169 379 4.7E-35 T 12-10-2018 IPR029065 Enolase C-terminal domain-like JDM601_1408 272289cf382ddeef2d6ec62e3fb76b4d 394 SUPERFAMILY SSF51604 148 386 3.54E-51 T 12-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily JDM601_1408 272289cf382ddeef2d6ec62e3fb76b4d 394 Gene3D G3DSA:3.30.390.10 1 126 6.2E-51 T 12-10-2018 IPR029017 Enolase-like, N-terminal JDM601_2514 f8e3b2689a66c80ead0f0d03fa4d1db7 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 227 2.7E-45 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2514 f8e3b2689a66c80ead0f0d03fa4d1db7 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 2.7E-45 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2514 f8e3b2689a66c80ead0f0d03fa4d1db7 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 2.7E-45 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2514 f8e3b2689a66c80ead0f0d03fa4d1db7 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 2.7E-45 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2514 f8e3b2689a66c80ead0f0d03fa4d1db7 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 2.7E-45 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2514 f8e3b2689a66c80ead0f0d03fa4d1db7 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 2.7E-45 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2514 f8e3b2689a66c80ead0f0d03fa4d1db7 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 2.8E-12 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2514 f8e3b2689a66c80ead0f0d03fa4d1db7 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 2.8E-12 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2514 f8e3b2689a66c80ead0f0d03fa4d1db7 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 2.8E-12 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2514 f8e3b2689a66c80ead0f0d03fa4d1db7 257 Gene3D G3DSA:3.40.50.720 1 249 2.1E-79 T 12-10-2018 JDM601_2514 f8e3b2689a66c80ead0f0d03fa4d1db7 257 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 141 169 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 JDM601_2514 f8e3b2689a66c80ead0f0d03fa4d1db7 257 SUPERFAMILY SSF51735 7 245 9.75E-81 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_2514 f8e3b2689a66c80ead0f0d03fa4d1db7 257 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 242 1.1E-63 T 12-10-2018 JDM601_1724 5de4a321260914b7e3fb6db8456fe95e 162 Hamap MF_00977 3'-5' exoribonuclease. 1 160 44.549 T 12-10-2018 IPR030853 3-5 exoribonuclease, actinobacteria GO:0000287|GO:0008408 JDM601_1724 5de4a321260914b7e3fb6db8456fe95e 162 Gene3D G3DSA:3.30.420.10 1 162 4.2E-70 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 JDM601_1724 5de4a321260914b7e3fb6db8456fe95e 162 Pfam PF16473 3' exoribonuclease, RNase T-like 2 156 3.6E-18 T 12-10-2018 IPR033390 3'-5' exoribonuclease Rv2179c-like domain JDM601_1724 5de4a321260914b7e3fb6db8456fe95e 162 SUPERFAMILY SSF53098 4 156 1.77E-6 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily JDM601_4002 9d25dd689d51765c08559c5858c0eefd 385 Pfam PF14759 Reductase C-terminal 311 379 1.9E-14 T 12-10-2018 IPR028202 Reductase, C-terminal JDM601_4002 9d25dd689d51765c08559c5858c0eefd 385 Gene3D G3DSA:3.30.390.30 311 383 1.7E-13 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 JDM601_4002 9d25dd689d51765c08559c5858c0eefd 385 SUPERFAMILY SSF51905 143 298 9.44E-29 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_4002 9d25dd689d51765c08559c5858c0eefd 385 SUPERFAMILY SSF55424 304 379 1.56E-18 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 JDM601_4002 9d25dd689d51765c08559c5858c0eefd 385 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 139 163 2.4E-5 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 JDM601_4002 9d25dd689d51765c08559c5858c0eefd 385 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 101 109 2.4E-5 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 JDM601_4002 9d25dd689d51765c08559c5858c0eefd 385 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 5 27 2.4E-5 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 JDM601_4002 9d25dd689d51765c08559c5858c0eefd 385 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 263 281 2.4E-5 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 JDM601_4002 9d25dd689d51765c08559c5858c0eefd 385 Gene3D G3DSA:3.50.50.60 6 299 1.7E-103 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_4002 9d25dd689d51765c08559c5858c0eefd 385 Gene3D G3DSA:3.50.50.60 113 235 1.7E-103 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_4002 9d25dd689d51765c08559c5858c0eefd 385 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 143 161 6.8E-20 T 12-10-2018 JDM601_4002 9d25dd689d51765c08559c5858c0eefd 385 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 100 118 6.8E-20 T 12-10-2018 JDM601_4002 9d25dd689d51765c08559c5858c0eefd 385 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 228 244 6.8E-20 T 12-10-2018 JDM601_4002 9d25dd689d51765c08559c5858c0eefd 385 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 253 275 6.8E-20 T 12-10-2018 JDM601_4002 9d25dd689d51765c08559c5858c0eefd 385 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 6.8E-20 T 12-10-2018 JDM601_4002 9d25dd689d51765c08559c5858c0eefd 385 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 291 1.1E-55 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JDM601_4002 9d25dd689d51765c08559c5858c0eefd 385 SUPERFAMILY SSF51905 6 186 3.76E-40 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_1211 7e6d8c6d95e6f7a523ce5106db99c415 344 SUPERFAMILY SSF144083 279 341 2.88E-18 T 12-10-2018 JDM601_1211 7e6d8c6d95e6f7a523ce5106db99c415 344 TIGRFAM TIGR00383 corA: magnesium and cobalt transport protein CorA 47 344 7.4E-62 T 12-10-2018 IPR004488 Magnesium/cobalt transport protein CorA GO:0006824|GO:0015087|GO:0015095|GO:0015693|GO:0016020 JDM601_1211 7e6d8c6d95e6f7a523ce5106db99c415 344 SUPERFAMILY SSF143865 9 276 5.62E-70 T 12-10-2018 JDM601_1211 7e6d8c6d95e6f7a523ce5106db99c415 344 Gene3D G3DSA:1.20.58.340 267 344 5.2E-22 T 12-10-2018 JDM601_1211 7e6d8c6d95e6f7a523ce5106db99c415 344 Pfam PF01544 CorA-like Mg2+ transporter protein 46 340 3.1E-65 T 12-10-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 JDM601_1211 7e6d8c6d95e6f7a523ce5106db99c415 344 Gene3D G3DSA:1.20.58.340 156 266 9.3E-29 T 12-10-2018 JDM601_1211 7e6d8c6d95e6f7a523ce5106db99c415 344 Gene3D G3DSA:3.30.460.20 27 155 3.6E-31 T 12-10-2018 JDM601_1844 e5254569370533e10ee9366b69da756f 226 Pfam PF01061 ABC-2 type transporter 4 188 6.0E-30 T 12-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 JDM601_1844 e5254569370533e10ee9366b69da756f 226 PIRSF PIRSF006648 1 226 4.4E-18 T 12-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 JDM601_1844 e5254569370533e10ee9366b69da756f 226 TIGRFAM TIGR00025 Mtu_efflux: ABC transporter efflux protein, DrrB family 3 225 2.2E-72 T 12-10-2018 IPR004377 ABC transporter, permease protein DrrB/DrrC GO:0042891|GO:0043215|GO:0046677|GO:1900753 JDM601_3718 8de3e35efc0a15481afb75b4584691a6 377 SUPERFAMILY SSF47203 231 374 6.12E-20 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 JDM601_3718 8de3e35efc0a15481afb75b4584691a6 377 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 125 218 5.2E-16 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 JDM601_3718 8de3e35efc0a15481afb75b4584691a6 377 Gene3D G3DSA:1.10.540.10 2 119 6.9E-26 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 JDM601_3718 8de3e35efc0a15481afb75b4584691a6 377 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 7 120 6.6E-22 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 JDM601_3718 8de3e35efc0a15481afb75b4584691a6 377 SUPERFAMILY SSF56645 2 239 1.57E-61 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 JDM601_3718 8de3e35efc0a15481afb75b4584691a6 377 Gene3D G3DSA:1.20.140.10 235 377 2.2E-28 T 12-10-2018 JDM601_3718 8de3e35efc0a15481afb75b4584691a6 377 Gene3D G3DSA:2.40.110.10 124 234 2.9E-27 T 12-10-2018 JDM601_3718 8de3e35efc0a15481afb75b4584691a6 377 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 230 370 1.9E-16 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 JDM601_3408 1f6c86f0dc35731a92a730e48bdafb15 397 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 126 229 1.0E-22 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 JDM601_3408 1f6c86f0dc35731a92a730e48bdafb15 397 Gene3D G3DSA:1.10.540.10 1 123 7.5E-38 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 JDM601_3408 1f6c86f0dc35731a92a730e48bdafb15 397 Gene3D G3DSA:2.40.110.10 125 248 9.2E-33 T 12-10-2018 JDM601_3408 1f6c86f0dc35731a92a730e48bdafb15 397 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 11 122 3.3E-33 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 JDM601_3408 1f6c86f0dc35731a92a730e48bdafb15 397 SUPERFAMILY SSF56645 8 252 2.23E-71 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 JDM601_3408 1f6c86f0dc35731a92a730e48bdafb15 397 Gene3D G3DSA:1.20.140.10 249 396 5.2E-49 T 12-10-2018 JDM601_3408 1f6c86f0dc35731a92a730e48bdafb15 397 PIRSF PIRSF016578 234 378 5.8E-9 T 12-10-2018 JDM601_3408 1f6c86f0dc35731a92a730e48bdafb15 397 PIRSF PIRSF016578 10 196 2.2E-8 T 12-10-2018 JDM601_3408 1f6c86f0dc35731a92a730e48bdafb15 397 SUPERFAMILY SSF47203 242 395 1.18E-51 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 JDM601_3408 1f6c86f0dc35731a92a730e48bdafb15 397 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 243 392 3.0E-45 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 JDM601_0114 6f105b9135347a755736b422e5b51c3a 243 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 138 166 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 JDM601_0114 6f105b9135347a755736b422e5b51c3a 243 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 11 237 9.4E-60 T 12-10-2018 JDM601_0114 6f105b9135347a755736b422e5b51c3a 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 170 2.0E-8 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0114 6f105b9135347a755736b422e5b51c3a 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 131 139 2.0E-8 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0114 6f105b9135347a755736b422e5b51c3a 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 2.0E-8 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0114 6f105b9135347a755736b422e5b51c3a 243 SUPERFAMILY SSF51735 6 240 2.96E-73 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_0114 6f105b9135347a755736b422e5b51c3a 243 Gene3D G3DSA:3.40.50.720 3 242 6.3E-75 T 12-10-2018 JDM601_0114 6f105b9135347a755736b422e5b51c3a 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 202 222 3.3E-38 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0114 6f105b9135347a755736b422e5b51c3a 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 3.3E-38 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0114 6f105b9135347a755736b422e5b51c3a 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 3.3E-38 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0114 6f105b9135347a755736b422e5b51c3a 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 3.3E-38 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0114 6f105b9135347a755736b422e5b51c3a 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 3.3E-38 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0114 6f105b9135347a755736b422e5b51c3a 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 3.3E-38 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0114 6f105b9135347a755736b422e5b51c3a 243 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 5 184 0.0094 T 12-10-2018 JDM601_1367 fce8ce11277253d12982dcd7816045f9 193 Pfam PF02796 Helix-turn-helix domain of resolvase 142 184 1.9E-10 T 12-10-2018 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 JDM601_1367 fce8ce11277253d12982dcd7816045f9 193 ProSitePatterns PS00398 Site-specific recombinases signature 2. 56 68 - T 12-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 JDM601_1367 fce8ce11277253d12982dcd7816045f9 193 Gene3D G3DSA:3.40.50.1390 5 128 6.5E-40 T 12-10-2018 JDM601_1367 fce8ce11277253d12982dcd7816045f9 193 ProSitePatterns PS00397 Site-specific recombinases active site. 9 17 - T 12-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 JDM601_1367 fce8ce11277253d12982dcd7816045f9 193 SMART SM00857 6 140 1.4E-47 T 12-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 JDM601_1367 fce8ce11277253d12982dcd7816045f9 193 Pfam PF00239 Resolvase, N terminal domain 6 140 1.6E-37 T 12-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 JDM601_1367 fce8ce11277253d12982dcd7816045f9 193 SUPERFAMILY SSF46689 142 183 9.32E-7 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JDM601_1367 fce8ce11277253d12982dcd7816045f9 193 SUPERFAMILY SSF53041 6 140 1.12E-40 T 12-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 JDM601_3357 59f8ef834936c8847d196e2d098dd285 338 SUPERFAMILY SSF50022 10 121 4.06E-29 T 12-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 JDM601_3357 59f8ef834936c8847d196e2d098dd285 338 Pfam PF00355 Rieske [2Fe-2S] domain 12 92 2.0E-14 T 12-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 JDM601_3357 59f8ef834936c8847d196e2d098dd285 338 Gene3D G3DSA:2.102.10.10 9 137 2.9E-38 T 12-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 JDM601_3357 59f8ef834936c8847d196e2d098dd285 338 SUPERFAMILY SSF55961 131 330 1.43E-13 T 12-10-2018 JDM601_3357 59f8ef834936c8847d196e2d098dd285 338 Gene3D G3DSA:3.30.530.90 154 338 1.1E-24 T 12-10-2018 JDM601_3022 5020dfcfa8abc367069d01cdd8aba4d6 203 Gene3D G3DSA:1.20.1510.10 10 199 4.5E-10 T 12-10-2018 IPR027469 Cation efflux transmembrane domain superfamily JDM601_3022 5020dfcfa8abc367069d01cdd8aba4d6 203 SUPERFAMILY SSF161111 11 197 4.71E-23 T 12-10-2018 IPR027469 Cation efflux transmembrane domain superfamily JDM601_3022 5020dfcfa8abc367069d01cdd8aba4d6 203 Pfam PF01545 Cation efflux family 75 194 1.3E-7 T 12-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 JDM601_0937 e0a35a91ba8c837b6aba324c8d2d8156 142 Pfam PF01741 Large-conductance mechanosensitive channel, MscL 2 124 2.7E-23 T 12-10-2018 IPR037673 Large-conductance mechanosensitive channel/anditomin synthesis protein L JDM601_0937 e0a35a91ba8c837b6aba324c8d2d8156 142 SUPERFAMILY SSF81330 10 124 2.62E-18 T 12-10-2018 IPR036019 Gated mechanosensitive channel JDM601_0937 e0a35a91ba8c837b6aba324c8d2d8156 142 Gene3D G3DSA:1.10.1200.120 1 125 1.1E-22 T 12-10-2018 IPR036019 Gated mechanosensitive channel JDM601_4191 e30da5a31a8598e1ca42361281ec277c 264 Pfam PF01694 Rhomboid family 96 227 4.0E-34 T 12-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 JDM601_4191 e30da5a31a8598e1ca42361281ec277c 264 Gene3D G3DSA:1.20.1540.10 55 254 5.1E-41 T 12-10-2018 IPR035952 Rhomboid-like superfamily JDM601_4191 e30da5a31a8598e1ca42361281ec277c 264 SUPERFAMILY SSF144091 60 233 5.23E-42 T 12-10-2018 JDM601_4273 187fbc1a8be4ed22d66c655150fb36f4 125 SMART SM00903 1 118 4.7E-34 T 12-10-2018 IPR002563 Flavin reductase like domain GO:0010181 JDM601_4273 187fbc1a8be4ed22d66c655150fb36f4 125 Pfam PF01613 Flavin reductase like domain 1 117 3.5E-28 T 12-10-2018 IPR002563 Flavin reductase like domain GO:0010181 JDM601_4273 187fbc1a8be4ed22d66c655150fb36f4 125 Gene3D G3DSA:2.30.110.10 1 123 9.5E-37 T 12-10-2018 IPR012349 FMN-binding split barrel GO:0048037 JDM601_4273 187fbc1a8be4ed22d66c655150fb36f4 125 SUPERFAMILY SSF50475 1 119 2.36E-35 T 12-10-2018 JDM601_3600 2c9f5135d76380718b1adbe328f0c4ab 489 SUPERFAMILY SSF53720 10 485 6.81E-142 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 JDM601_3600 2c9f5135d76380718b1adbe328f0c4ab 489 TIGRFAM TIGR04284 aldehy_Rv0768: aldehyde dehydrogenase, Rv0768 family 9 488 7.2E-287 T 12-10-2018 IPR026460 Aldehyde dehydrogenase, Rv0768 family JDM601_3600 2c9f5135d76380718b1adbe328f0c4ab 489 Pfam PF00171 Aldehyde dehydrogenase family 24 484 5.6E-144 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 JDM601_3600 2c9f5135d76380718b1adbe328f0c4ab 489 Gene3D G3DSA:3.40.309.10 263 454 1.3E-154 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 JDM601_3600 2c9f5135d76380718b1adbe328f0c4ab 489 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 258 265 - T 12-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 JDM601_3600 2c9f5135d76380718b1adbe328f0c4ab 489 Gene3D G3DSA:3.40.605.10 13 482 1.3E-154 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 JDM601_3213 0a61a44f875ca24b8880c9148c18e4d4 238 SMART SM00855 39 193 1.5E-16 T 12-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 JDM601_3213 0a61a44f875ca24b8880c9148c18e4d4 238 Gene3D G3DSA:3.40.50.1240 34 226 4.5E-31 T 12-10-2018 IPR029033 Histidine phosphatase superfamily JDM601_3213 0a61a44f875ca24b8880c9148c18e4d4 238 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 42 51 - T 12-10-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824 JDM601_3213 0a61a44f875ca24b8880c9148c18e4d4 238 PIRSF PIRSF000709 32 137 4.1E-7 T 12-10-2018 JDM601_3213 0a61a44f875ca24b8880c9148c18e4d4 238 SUPERFAMILY SSF53254 38 233 5.27E-34 T 12-10-2018 IPR029033 Histidine phosphatase superfamily JDM601_3213 0a61a44f875ca24b8880c9148c18e4d4 238 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 40 232 1.4E-30 T 12-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 JDM601_1946 cee3e0bca123093441271fae8af110d6 262 SUPERFAMILY SSF161098 10 252 2.8E-50 T 12-10-2018 IPR035906 MetI-like superfamily JDM601_1946 cee3e0bca123093441271fae8af110d6 262 Gene3D G3DSA:1.10.3720.10 10 258 1.5E-59 T 12-10-2018 IPR035906 MetI-like superfamily JDM601_1946 cee3e0bca123093441271fae8af110d6 262 TIGRFAM TIGR01581 Mo_ABC_porter: NifC-like ABC-type porter 30 251 5.5E-83 T 12-10-2018 IPR006469 NifC-like ABC-type porter GO:0005215|GO:0016020|GO:0055085 JDM601_1946 cee3e0bca123093441271fae8af110d6 262 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 69 255 2.9E-18 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 JDM601_1946 cee3e0bca123093441271fae8af110d6 262 TIGRFAM TIGR02141 modB_ABC: molybdate ABC transporter, permease protein 53 253 8.6E-66 T 12-10-2018 IPR011867 Molybdate ABC transporter, permease protein GO:0015098|GO:0015689|GO:0016021 JDM601_0420 e2c43d9475d220168977ddb8f494cb25 301 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 64 86 - T 12-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 JDM601_0420 e2c43d9475d220168977ddb8f494cb25 301 TIGRFAM TIGR00473 pssA: CDP-diacylglycerol-serine O-phosphatidyltransferase 28 193 3.3E-36 T 12-10-2018 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase KEGG: 00260+2.7.8.8|KEGG: 00564+2.7.8.8|MetaCyc: PWY-5669 JDM601_0420 e2c43d9475d220168977ddb8f494cb25 301 Pfam PF01066 CDP-alcohol phosphatidyltransferase 23 86 2.9E-9 T 12-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 JDM601_0420 e2c43d9475d220168977ddb8f494cb25 301 Gene3D G3DSA:1.20.120.1760 10 197 3.3E-12 T 12-10-2018 JDM601_3574 6f0f099f3aed7da6414e0af436ba4a0d 79 SUPERFAMILY SSF82697 3 76 2.44E-23 T 12-10-2018 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 JDM601_3574 6f0f099f3aed7da6414e0af436ba4a0d 79 Pfam PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase 4 74 1.3E-25 T 12-10-2018 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 JDM601_3574 6f0f099f3aed7da6414e0af436ba4a0d 79 Gene3D G3DSA:3.30.1280.10 2 78 1.8E-25 T 12-10-2018 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 JDM601_3574 6f0f099f3aed7da6414e0af436ba4a0d 79 TIGRFAM TIGR00302 TIGR00302: phosphoribosylformylglycinamidine synthase, purS protein 4 75 7.9E-16 T 12-10-2018 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 JDM601_3574 6f0f099f3aed7da6414e0af436ba4a0d 79 Hamap MF_01926 Phosphoribosylformylglycinamidine synthase subunit PurS [purS]. 2 76 19.447 T 12-10-2018 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 JDM601_3574 6f0f099f3aed7da6414e0af436ba4a0d 79 ProDom PD010362 PHOSPHORIBOSYLFORMYLGLYCINAMIDINE PURS SYNTHETASE SYNTHASE COMPONENT SYNTHASE LIGASE FGAM UPF0062 I 11 74 2.0E-17 T 12-10-2018 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 JDM601_2407 2637f13b7291df70605941e041643da5 199 Gene3D G3DSA:2.60.120.10 103 194 4.5E-9 T 12-10-2018 IPR014710 RmlC-like jelly roll fold JDM601_2407 2637f13b7291df70605941e041643da5 199 SUPERFAMILY SSF51182 111 190 6.17E-10 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily JDM601_2407 2637f13b7291df70605941e041643da5 199 Pfam PF10006 Uncharacterized conserved protein (DUF2249) 5 76 1.9E-21 T 12-10-2018 IPR018720 Domain of unknown function DUF2249 JDM601_1224 1ba4633f86ce3f5467f51b4874ca6f3d 455 Pfam PF01565 FAD binding domain 41 179 1.2E-40 T 12-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 JDM601_1224 1ba4633f86ce3f5467f51b4874ca6f3d 455 Gene3D G3DSA:1.10.45.10 415 453 1.1E-11 T 12-10-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 JDM601_1224 1ba4633f86ce3f5467f51b4874ca6f3d 455 Pfam PF02913 FAD linked oxidases, C-terminal domain 218 452 5.0E-65 T 12-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 JDM601_1224 1ba4633f86ce3f5467f51b4874ca6f3d 455 Gene3D G3DSA:3.30.70.2740 332 414 5.3E-11 T 12-10-2018 JDM601_1224 1ba4633f86ce3f5467f51b4874ca6f3d 455 Gene3D G3DSA:3.30.465.40 18 235 1.6E-69 T 12-10-2018 JDM601_1224 1ba4633f86ce3f5467f51b4874ca6f3d 455 SUPERFAMILY SSF55103 191 453 2.29E-58 T 12-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 JDM601_1224 1ba4633f86ce3f5467f51b4874ca6f3d 455 SUPERFAMILY SSF56176 3 214 6.07E-71 T 12-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 JDM601_2921 30afd685eae6916f6566633e443d77ce 392 Pfam PF00899 ThiF family 23 258 3.8E-58 T 12-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 JDM601_2921 30afd685eae6916f6566633e443d77ce 392 Pfam PF00581 Rhodanese-like domain 290 383 3.0E-16 T 12-10-2018 IPR001763 Rhodanese-like domain JDM601_2921 30afd685eae6916f6566633e443d77ce 392 Gene3D G3DSA:3.40.250.10 274 389 4.0E-25 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily JDM601_2921 30afd685eae6916f6566633e443d77ce 392 SUPERFAMILY SSF69572 10 359 6.67E-92 T 12-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 JDM601_2921 30afd685eae6916f6566633e443d77ce 392 Gene3D G3DSA:3.40.50.720 15 265 7.7E-80 T 12-10-2018 JDM601_2921 30afd685eae6916f6566633e443d77ce 392 SMART SM00450 290 387 1.8E-23 T 12-10-2018 IPR001763 Rhodanese-like domain JDM601_0443 0e68940e158d5613795da1da2dc57f65 680 Pfam PF00326 Prolyl oligopeptidase family 475 677 1.6E-44 T 12-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 JDM601_0443 0e68940e158d5613795da1da2dc57f65 680 Gene3D G3DSA:3.40.50.1820 9 638 1.2E-122 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_0443 0e68940e158d5613795da1da2dc57f65 680 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 535 555 2.8E-40 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 JDM601_0443 0e68940e158d5613795da1da2dc57f65 680 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 609 631 2.8E-40 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 JDM601_0443 0e68940e158d5613795da1da2dc57f65 680 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 450 468 2.8E-40 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 JDM601_0443 0e68940e158d5613795da1da2dc57f65 680 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 477 501 2.8E-40 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 JDM601_0443 0e68940e158d5613795da1da2dc57f65 680 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 505 524 2.8E-40 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 JDM601_0443 0e68940e158d5613795da1da2dc57f65 680 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 590 605 2.8E-40 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 JDM601_0443 0e68940e158d5613795da1da2dc57f65 680 SUPERFAMILY SSF50993 6 405 9.68E-48 T 12-10-2018 JDM601_0443 0e68940e158d5613795da1da2dc57f65 680 SUPERFAMILY SSF53474 423 666 1.14E-43 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_0443 0e68940e158d5613795da1da2dc57f65 680 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 5 400 1.4E-26 T 12-10-2018 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 JDM601_0443 0e68940e158d5613795da1da2dc57f65 680 Gene3D G3DSA:2.130.10.120 59 414 1.2E-122 T 12-10-2018 JDM601_2344 d5409e1c66b232d18d89e641d55fd305 395 Pfam PF02515 CoA-transferase family III 3 371 1.4E-110 T 12-10-2018 IPR003673 CoA-transferase family III GO:0003824 JDM601_2344 d5409e1c66b232d18d89e641d55fd305 395 Gene3D G3DSA:3.30.1540.10 230 322 2.8E-117 T 12-10-2018 JDM601_2344 d5409e1c66b232d18d89e641d55fd305 395 Gene3D G3DSA:3.40.50.10540 3 389 2.8E-117 T 12-10-2018 IPR023606 CoA-transferase family III domain superfamily JDM601_2344 d5409e1c66b232d18d89e641d55fd305 395 SUPERFAMILY SSF89796 2 395 4.71E-117 T 12-10-2018 IPR023606 CoA-transferase family III domain superfamily JDM601_2808 65af39230550af4ad1e6798b316f455a 322 Gene3D G3DSA:3.40.50.720 9 314 7.7E-115 T 12-10-2018 JDM601_2808 65af39230550af4ad1e6798b316f455a 322 SUPERFAMILY SSF51735 112 290 1.89E-54 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_2808 65af39230550af4ad1e6798b316f455a 322 SUPERFAMILY SSF52283 9 141 1.83E-17 T 12-10-2018 JDM601_2808 65af39230550af4ad1e6798b316f455a 322 Gene3D G3DSA:3.40.50.720 111 306 7.7E-115 T 12-10-2018 JDM601_2808 65af39230550af4ad1e6798b316f455a 322 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 118 290 5.2E-56 T 12-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 JDM601_2808 65af39230550af4ad1e6798b316f455a 322 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 229 245 - T 12-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site JDM601_3306 62b8e362da0eb313ffa4358e60bdf212 597 PIRSF PIRSF001217 13 588 8.8E-155 T 12-10-2018 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 JDM601_3306 62b8e362da0eb313ffa4358e60bdf212 597 Gene3D G3DSA:3.40.1750.10 155 485 5.8E-134 T 12-10-2018 JDM601_3306 62b8e362da0eb313ffa4358e60bdf212 597 Gene3D G3DSA:3.90.226.10 283 527 5.8E-134 T 12-10-2018 JDM601_3306 62b8e362da0eb313ffa4358e60bdf212 597 Pfam PF01343 Peptidase family S49 107 257 1.7E-39 T 12-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 JDM601_3306 62b8e362da0eb313ffa4358e60bdf212 597 Pfam PF01343 Peptidase family S49 378 529 1.6E-51 T 12-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 JDM601_3306 62b8e362da0eb313ffa4358e60bdf212 597 SUPERFAMILY SSF52096 303 515 6.55E-40 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily JDM601_3306 62b8e362da0eb313ffa4358e60bdf212 597 SUPERFAMILY SSF52096 63 248 5.05E-19 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily JDM601_3306 62b8e362da0eb313ffa4358e60bdf212 597 Gene3D G3DSA:3.90.226.10 64 282 5.8E-134 T 12-10-2018 JDM601_3306 62b8e362da0eb313ffa4358e60bdf212 597 TIGRFAM TIGR00706 SppA_dom: signal peptide peptidase SppA, 36K type 307 527 3.1E-53 T 12-10-2018 IPR004635 Peptidase S49, SppA GO:0006508|GO:0008233 JDM601_0232 76cf2b47c52361aa1eb400d6ebefd6b5 294 PIRSF PIRSF000097 13 291 1.0E-77 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 JDM601_0232 76cf2b47c52361aa1eb400d6ebefd6b5 294 Gene3D G3DSA:3.20.20.100 13 294 9.8E-110 T 12-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily JDM601_0232 76cf2b47c52361aa1eb400d6ebefd6b5 294 PRINTS PR00069 Aldo-keto reductase signature 49 73 8.1E-44 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 JDM601_0232 76cf2b47c52361aa1eb400d6ebefd6b5 294 PRINTS PR00069 Aldo-keto reductase signature 105 123 8.1E-44 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 JDM601_0232 76cf2b47c52361aa1eb400d6ebefd6b5 294 PRINTS PR00069 Aldo-keto reductase signature 214 238 8.1E-44 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 JDM601_0232 76cf2b47c52361aa1eb400d6ebefd6b5 294 PRINTS PR00069 Aldo-keto reductase signature 137 154 8.1E-44 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 JDM601_0232 76cf2b47c52361aa1eb400d6ebefd6b5 294 PRINTS PR00069 Aldo-keto reductase signature 171 200 8.1E-44 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 JDM601_0232 76cf2b47c52361aa1eb400d6ebefd6b5 294 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 137 154 - T 12-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 JDM601_0232 76cf2b47c52361aa1eb400d6ebefd6b5 294 Pfam PF00248 Aldo/keto reductase family 36 277 2.3E-44 T 12-10-2018 IPR023210 NADP-dependent oxidoreductase domain JDM601_0232 76cf2b47c52361aa1eb400d6ebefd6b5 294 SUPERFAMILY SSF51430 18 289 1.7E-86 T 12-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily JDM601_2560 fbd6636744697c032e0ef1fae48e8341 439 TIGRFAM TIGR00797 matE: MATE efflux family protein 19 410 3.2E-94 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 JDM601_2560 fbd6636744697c032e0ef1fae48e8341 439 Pfam PF01554 MatE 19 178 3.7E-25 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 JDM601_2560 fbd6636744697c032e0ef1fae48e8341 439 Pfam PF01554 MatE 239 392 6.5E-15 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 JDM601_2058 95651ffaf9d666d5965000f4f9c5ea80 87 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 5 85 1.1E-10 T 12-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family JDM601_2058 95651ffaf9d666d5965000f4f9c5ea80 87 SUPERFAMILY SSF143011 1 84 4.97E-18 T 12-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily JDM601_2058 95651ffaf9d666d5965000f4f9c5ea80 87 Gene3D G3DSA:3.30.2310.20 1 87 1.3E-31 T 12-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily JDM601_2242 092cb46e23391f715caed1a88470dd55 548 ProSitePatterns PS00211 ABC transporters family signature. 459 473 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JDM601_2242 092cb46e23391f715caed1a88470dd55 548 ProSitePatterns PS00211 ABC transporters family signature. 162 176 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JDM601_2242 092cb46e23391f715caed1a88470dd55 548 Pfam PF00005 ABC transporter 24 200 1.6E-17 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JDM601_2242 092cb46e23391f715caed1a88470dd55 548 Pfam PF00005 ABC transporter 356 487 1.3E-21 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JDM601_2242 092cb46e23391f715caed1a88470dd55 548 Gene3D G3DSA:3.40.50.300 303 546 2.1E-52 T 12-10-2018 JDM601_2242 092cb46e23391f715caed1a88470dd55 548 SMART SM00382 28 245 6.1E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain JDM601_2242 092cb46e23391f715caed1a88470dd55 548 SMART SM00382 363 531 1.4E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain JDM601_2242 092cb46e23391f715caed1a88470dd55 548 Pfam PF12848 ABC transporter 245 317 1.1E-7 T 12-10-2018 IPR032781 ABC-transporter extension domain JDM601_2242 092cb46e23391f715caed1a88470dd55 548 SUPERFAMILY SSF52540 344 532 1.17E-44 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_2242 092cb46e23391f715caed1a88470dd55 548 Gene3D G3DSA:3.40.50.300 8 298 3.0E-51 T 12-10-2018 JDM601_2242 092cb46e23391f715caed1a88470dd55 548 SUPERFAMILY SSF52540 4 241 3.88E-37 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_2028 ec8c493a7d6011e48735b8cd3f714869 286 Gene3D G3DSA:3.40.50.150 12 286 3.5E-86 T 12-10-2018 JDM601_2028 ec8c493a7d6011e48735b8cd3f714869 286 Pfam PF02353 Mycolic acid cyclopropane synthetase 5 282 1.1E-98 T 12-10-2018 JDM601_2028 ec8c493a7d6011e48735b8cd3f714869 286 SUPERFAMILY SSF53335 12 286 6.72E-68 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JDM601_2028 ec8c493a7d6011e48735b8cd3f714869 286 PIRSF PIRSF003085 7 286 7.1E-88 T 12-10-2018 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 JDM601_3987 96e39215d2bfcf5f12c8c6df42608cac 482 SMART SM01060 7 388 9.5E-265 T 12-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 JDM601_3987 96e39215d2bfcf5f12c8c6df42608cac 482 SUPERFAMILY SSF56634 4 480 1.13E-190 T 12-10-2018 IPR020835 Catalase superfamily GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 JDM601_3987 96e39215d2bfcf5f12c8c6df42608cac 482 ProSitePatterns PS00438 Catalase proximal active site signature. 43 59 - T 12-10-2018 IPR024708 Catalase active site GO:0004096 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 JDM601_3987 96e39215d2bfcf5f12c8c6df42608cac 482 Gene3D G3DSA:2.40.180.10 1 482 6.2E-209 T 12-10-2018 IPR037060 Catalase core domain superfamily GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 JDM601_3987 96e39215d2bfcf5f12c8c6df42608cac 482 PIRSF PIRSF038928 1 482 6.4E-224 T 12-10-2018 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 JDM601_3987 96e39215d2bfcf5f12c8c6df42608cac 482 Pfam PF00199 Catalase 7 384 5.5E-177 T 12-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 JDM601_3987 96e39215d2bfcf5f12c8c6df42608cac 482 PRINTS PR00067 Catalase signature 287 314 3.4E-62 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 JDM601_3987 96e39215d2bfcf5f12c8c6df42608cac 482 PRINTS PR00067 Catalase signature 103 120 3.4E-62 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 JDM601_3987 96e39215d2bfcf5f12c8c6df42608cac 482 PRINTS PR00067 Catalase signature 82 100 3.4E-62 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 JDM601_3987 96e39215d2bfcf5f12c8c6df42608cac 482 PRINTS PR00067 Catalase signature 20 43 3.4E-62 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 JDM601_3987 96e39215d2bfcf5f12c8c6df42608cac 482 PRINTS PR00067 Catalase signature 122 140 3.4E-62 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 JDM601_3987 96e39215d2bfcf5f12c8c6df42608cac 482 PRINTS PR00067 Catalase signature 319 345 3.4E-62 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 JDM601_3987 96e39215d2bfcf5f12c8c6df42608cac 482 Pfam PF06628 Catalase-related immune-responsive 414 477 4.4E-17 T 12-10-2018 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 JDM601_3682 74d3230780140fcf08b5bebe51b716f7 419 SUPERFAMILY SSF48264 56 414 4.19E-75 T 12-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_3682 74d3230780140fcf08b5bebe51b716f7 419 Pfam PF00067 Cytochrome P450 294 383 2.7E-13 T 12-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_3682 74d3230780140fcf08b5bebe51b716f7 419 Gene3D G3DSA:1.10.630.10 3 419 9.2E-119 T 12-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_3682 74d3230780140fcf08b5bebe51b716f7 419 PRINTS PR00359 B-class P450 signature 291 302 4.0E-42 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3682 74d3230780140fcf08b5bebe51b716f7 419 PRINTS PR00359 B-class P450 signature 336 351 4.0E-42 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3682 74d3230780140fcf08b5bebe51b716f7 419 PRINTS PR00359 B-class P450 signature 367 378 4.0E-42 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3682 74d3230780140fcf08b5bebe51b716f7 419 PRINTS PR00359 B-class P450 signature 154 170 4.0E-42 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3682 74d3230780140fcf08b5bebe51b716f7 419 PRINTS PR00359 B-class P450 signature 358 367 4.0E-42 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3682 74d3230780140fcf08b5bebe51b716f7 419 PRINTS PR00359 B-class P450 signature 108 119 4.0E-42 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3682 74d3230780140fcf08b5bebe51b716f7 419 PRINTS PR00359 B-class P450 signature 308 335 4.0E-42 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3682 74d3230780140fcf08b5bebe51b716f7 419 PRINTS PR00359 B-class P450 signature 212 234 4.0E-42 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3682 74d3230780140fcf08b5bebe51b716f7 419 PRINTS PR00359 B-class P450 signature 171 186 4.0E-42 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_1715 15b610d83cd45e9d11e17e9f34b6252e 380 Gene3D G3DSA:3.40.50.2000 174 367 7.6E-122 T 12-10-2018 JDM601_1715 15b610d83cd45e9d11e17e9f34b6252e 380 Pfam PF00534 Glycosyl transferases group 1 186 360 3.0E-40 T 12-10-2018 IPR001296 Glycosyl transferase, family 1 JDM601_1715 15b610d83cd45e9d11e17e9f34b6252e 380 SUPERFAMILY SSF53756 3 379 1.14E-80 T 12-10-2018 JDM601_1715 15b610d83cd45e9d11e17e9f34b6252e 380 Pfam PF13439 Glycosyltransferase Family 4 15 177 1.9E-16 T 12-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 JDM601_1715 15b610d83cd45e9d11e17e9f34b6252e 380 Gene3D G3DSA:3.40.50.2000 5 368 7.6E-122 T 12-10-2018 JDM601_1187 8a437415ed218320ed97dd7d110bca47 388 SUPERFAMILY SSF53756 1 385 1.43E-86 T 12-10-2018 JDM601_1187 8a437415ed218320ed97dd7d110bca47 388 Gene3D G3DSA:3.40.50.2000 8 382 2.3E-78 T 12-10-2018 JDM601_1187 8a437415ed218320ed97dd7d110bca47 388 Pfam PF13439 Glycosyltransferase Family 4 15 176 1.9E-31 T 12-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 JDM601_1187 8a437415ed218320ed97dd7d110bca47 388 Gene3D G3DSA:3.40.50.2000 173 365 2.3E-78 T 12-10-2018 JDM601_1187 8a437415ed218320ed97dd7d110bca47 388 Pfam PF00534 Glycosyl transferases group 1 193 364 7.6E-30 T 12-10-2018 IPR001296 Glycosyl transferase, family 1 JDM601_1187 8a437415ed218320ed97dd7d110bca47 388 TIGRFAM TIGR02149 glgA_Coryne: glycogen synthase, Corynebacterium family 1 384 2.4E-181 T 12-10-2018 IPR011875 Alpha-maltose-1-phosphate synthase GO:0009250|GO:0016740 KEGG: 00500+2.4.1.342|MetaCyc: PWY-7900 JDM601_0392 d3019c017e54eeb57fc12be235535357 497 Pfam PF13738 Pyridine nucleotide-disulphide oxidoreductase 12 223 3.4E-18 T 12-10-2018 JDM601_0392 d3019c017e54eeb57fc12be235535357 497 Gene3D G3DSA:3.50.50.60 309 481 2.1E-23 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_0392 d3019c017e54eeb57fc12be235535357 497 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 135 144 2.8E-7 T 12-10-2018 JDM601_0392 d3019c017e54eeb57fc12be235535357 497 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 10 32 2.8E-7 T 12-10-2018 JDM601_0392 d3019c017e54eeb57fc12be235535357 497 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 176 201 2.8E-7 T 12-10-2018 JDM601_0392 d3019c017e54eeb57fc12be235535357 497 Gene3D G3DSA:3.50.50.60 3 253 2.2E-66 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_0392 d3019c017e54eeb57fc12be235535357 497 SUPERFAMILY SSF51905 9 463 3.05E-55 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_3518 074ee1208526df6d8f0393d68ffaa923 339 PRINTS PR00409 Phthalate dioxygenase reductase family signature 92 106 4.1E-8 T 12-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 JDM601_3518 074ee1208526df6d8f0393d68ffaa923 339 PRINTS PR00409 Phthalate dioxygenase reductase family signature 198 206 4.1E-8 T 12-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 JDM601_3518 074ee1208526df6d8f0393d68ffaa923 339 PRINTS PR00409 Phthalate dioxygenase reductase family signature 55 69 4.1E-8 T 12-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 JDM601_3518 074ee1208526df6d8f0393d68ffaa923 339 PRINTS PR00409 Phthalate dioxygenase reductase family signature 114 133 4.1E-8 T 12-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 JDM601_3518 074ee1208526df6d8f0393d68ffaa923 339 Gene3D G3DSA:3.10.20.30 237 339 3.9E-24 T 12-10-2018 IPR012675 Beta-grasp domain superfamily JDM601_3518 074ee1208526df6d8f0393d68ffaa923 339 SUPERFAMILY SSF54292 233 336 1.84E-23 T 12-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 JDM601_3518 074ee1208526df6d8f0393d68ffaa923 339 Pfam PF00175 Oxidoreductase NAD-binding domain 117 212 2.1E-10 T 12-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 JDM601_3518 074ee1208526df6d8f0393d68ffaa923 339 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 287 295 - T 12-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 JDM601_3518 074ee1208526df6d8f0393d68ffaa923 339 Pfam PF00970 Oxidoreductase FAD-binding domain 16 104 2.6E-12 T 12-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 JDM601_3518 074ee1208526df6d8f0393d68ffaa923 339 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 257 329 1.9E-13 T 12-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 JDM601_3518 074ee1208526df6d8f0393d68ffaa923 339 Gene3D G3DSA:2.40.30.10 5 105 2.8E-26 T 12-10-2018 JDM601_3518 074ee1208526df6d8f0393d68ffaa923 339 Gene3D G3DSA:3.40.50.80 106 231 1.1E-20 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain JDM601_3518 074ee1208526df6d8f0393d68ffaa923 339 SUPERFAMILY SSF52343 93 215 4.45E-21 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain JDM601_3518 074ee1208526df6d8f0393d68ffaa923 339 SUPERFAMILY SSF63380 5 107 1.86E-26 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel JDM601_0830 f7721d3c6953fad790df1eba959c35be 809 Gene3D G3DSA:2.70.150.10 11 204 4.4E-53 T 12-10-2018 JDM601_0830 f7721d3c6953fad790df1eba959c35be 809 Gene3D G3DSA:3.40.1110.10 312 324 4.4E-53 T 12-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 JDM601_0830 f7721d3c6953fad790df1eba959c35be 809 Gene3D G3DSA:3.40.1110.10 410 445 1.1E-45 T 12-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 JDM601_0830 f7721d3c6953fad790df1eba959c35be 809 SUPERFAMILY SSF81653 107 198 1.96E-19 T 12-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 JDM601_0830 f7721d3c6953fad790df1eba959c35be 809 SUPERFAMILY SSF56784 298 586 5.86E-36 T 12-10-2018 IPR036412 HAD-like superfamily JDM601_0830 f7721d3c6953fad790df1eba959c35be 809 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 302 316 4.1E-25 T 12-10-2018 JDM601_0830 f7721d3c6953fad790df1eba959c35be 809 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 559 571 4.1E-25 T 12-10-2018 JDM601_0830 f7721d3c6953fad790df1eba959c35be 809 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 151 165 4.1E-25 T 12-10-2018 JDM601_0830 f7721d3c6953fad790df1eba959c35be 809 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 536 555 4.1E-25 T 12-10-2018 JDM601_0830 f7721d3c6953fad790df1eba959c35be 809 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 460 470 4.1E-25 T 12-10-2018 JDM601_0830 f7721d3c6953fad790df1eba959c35be 809 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 536 552 2.9E-6 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 JDM601_0830 f7721d3c6953fad790df1eba959c35be 809 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 401 419 2.9E-6 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 JDM601_0830 f7721d3c6953fad790df1eba959c35be 809 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 700 721 2.9E-6 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 JDM601_0830 f7721d3c6953fad790df1eba959c35be 809 Gene3D G3DSA:3.40.50.1000 446 580 1.1E-45 T 12-10-2018 IPR023214 HAD superfamily JDM601_0830 f7721d3c6953fad790df1eba959c35be 809 Gene3D G3DSA:3.40.50.1000 299 311 4.4E-53 T 12-10-2018 IPR023214 HAD superfamily JDM601_0830 f7721d3c6953fad790df1eba959c35be 809 Gene3D G3DSA:1.20.1110.10 45 298 4.4E-53 T 12-10-2018 JDM601_0830 f7721d3c6953fad790df1eba959c35be 809 Pfam PF00702 haloacid dehalogenase-like hydrolase 298 550 1.2E-19 T 12-10-2018 JDM601_0830 f7721d3c6953fad790df1eba959c35be 809 SUPERFAMILY SSF81665 12 786 6.93E-57 T 12-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 JDM601_0830 f7721d3c6953fad790df1eba959c35be 809 Pfam PF00122 E1-E2 ATPase 107 281 3.1E-38 T 12-10-2018 JDM601_0830 f7721d3c6953fad790df1eba959c35be 809 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 304 310 - T 12-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 JDM601_0830 f7721d3c6953fad790df1eba959c35be 809 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 508 619 4.1E-26 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 JDM601_0830 f7721d3c6953fad790df1eba959c35be 809 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 76 340 1.4E-31 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 JDM601_0830 f7721d3c6953fad790df1eba959c35be 809 Gene3D G3DSA:1.20.1110.10 581 685 1.1E-45 T 12-10-2018 JDM601_1343 80df0e414f5d7aaf125814c61fd85523 260 Pfam PF01138 3' exoribonuclease family, domain 1 12 142 1.2E-23 T 12-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 JDM601_1343 80df0e414f5d7aaf125814c61fd85523 260 Hamap MF_00564 Ribonuclease PH [rph]. 13 240 43.273 T 12-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 JDM601_1343 80df0e414f5d7aaf125814c61fd85523 260 SUPERFAMILY SSF54211 3 184 3.54E-43 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold JDM601_1343 80df0e414f5d7aaf125814c61fd85523 260 Pfam PF03725 3' exoribonuclease family, domain 2 161 226 4.1E-10 T 12-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 JDM601_1343 80df0e414f5d7aaf125814c61fd85523 260 SUPERFAMILY SSF55666 157 244 1.13E-20 T 12-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 JDM601_1343 80df0e414f5d7aaf125814c61fd85523 260 ProSitePatterns PS01277 Ribonuclease PH signature. 118 131 - T 12-10-2018 IPR018336 Ribonuclease PH, conserved site JDM601_1343 80df0e414f5d7aaf125814c61fd85523 260 Gene3D G3DSA:3.30.230.70 15 259 4.2E-65 T 12-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 JDM601_1343 80df0e414f5d7aaf125814c61fd85523 260 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 4 239 1.2E-105 T 12-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 JDM601_1009 3ce22801876f5f39fb78e1eb2ffc162f 546 SUPERFAMILY SSF56801 6 537 1.1E-140 T 12-10-2018 JDM601_1009 3ce22801876f5f39fb78e1eb2ffc162f 546 Pfam PF13193 AMP-binding enzyme C-terminal domain 449 524 5.2E-17 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain JDM601_1009 3ce22801876f5f39fb78e1eb2ffc162f 546 Pfam PF00501 AMP-binding enzyme 23 440 1.8E-96 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 JDM601_1009 3ce22801876f5f39fb78e1eb2ffc162f 546 Gene3D G3DSA:3.40.50.12780 1 435 1.2E-119 T 12-10-2018 JDM601_1009 3ce22801876f5f39fb78e1eb2ffc162f 546 ProSitePatterns PS00455 Putative AMP-binding domain signature. 185 196 - T 12-10-2018 IPR020845 AMP-binding, conserved site JDM601_1009 3ce22801876f5f39fb78e1eb2ffc162f 546 Gene3D G3DSA:3.30.300.310 436 540 6.2E-35 T 12-10-2018 JDM601_0191 68b583a076e7486b7ad9b444a749a85d 615 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 166 276 9.0E-18 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 JDM601_0191 68b583a076e7486b7ad9b444a749a85d 615 Pfam PF12418 Acyl-CoA dehydrogenase N terminal 3 23 2.5E-7 T 12-10-2018 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria JDM601_0191 68b583a076e7486b7ad9b444a749a85d 615 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 478 610 7.8E-31 T 12-10-2018 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain JDM601_0191 68b583a076e7486b7ad9b444a749a85d 615 Gene3D G3DSA:1.20.140.10 292 464 2.5E-31 T 12-10-2018 JDM601_0191 68b583a076e7486b7ad9b444a749a85d 615 Gene3D G3DSA:2.40.110.20 137 290 4.9E-34 T 12-10-2018 JDM601_0191 68b583a076e7486b7ad9b444a749a85d 615 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 292 459 3.1E-14 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 JDM601_0191 68b583a076e7486b7ad9b444a749a85d 615 SUPERFAMILY SSF47203 296 481 1.77E-29 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 JDM601_0191 68b583a076e7486b7ad9b444a749a85d 615 SUPERFAMILY SSF56645 40 288 2.75E-40 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 JDM601_2728 f7fa9d1427f5ff0402e02907fb7be7a2 500 ProSitePatterns PS01234 Glutamyl-tRNA(Gln) amidotransferase subunit B signature. 166 180 - T 12-10-2018 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site GO:0016884 JDM601_2728 f7fa9d1427f5ff0402e02907fb7be7a2 500 Gene3D G3DSA:1.10.150.380 322 437 9.1E-16 T 12-10-2018 JDM601_2728 f7fa9d1427f5ff0402e02907fb7be7a2 500 Gene3D G3DSA:1.10.10.410 439 498 1.4E-14 T 12-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal JDM601_2728 f7fa9d1427f5ff0402e02907fb7be7a2 500 Pfam PF02934 GatB/GatE catalytic domain 21 314 3.3E-103 T 12-10-2018 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic GO:0016874 JDM601_2728 f7fa9d1427f5ff0402e02907fb7be7a2 500 SUPERFAMILY SSF89095 352 497 2.79E-22 T 12-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 JDM601_2728 f7fa9d1427f5ff0402e02907fb7be7a2 500 Pfam PF02637 GatB domain 354 496 4.7E-38 T 12-10-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 JDM601_2728 f7fa9d1427f5ff0402e02907fb7be7a2 500 SUPERFAMILY SSF55931 20 321 1.57E-108 T 12-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 JDM601_2728 f7fa9d1427f5ff0402e02907fb7be7a2 500 SMART SM00845 352 499 5.7E-51 T 12-10-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 JDM601_2728 f7fa9d1427f5ff0402e02907fb7be7a2 500 Hamap MF_00121 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B [gatB]. 17 500 35.242 T 12-10-2018 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 JDM601_2728 f7fa9d1427f5ff0402e02907fb7be7a2 500 TIGRFAM TIGR00133 gatB: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit 18 495 2.2E-139 T 12-10-2018 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 JDM601_1362 6788df70228806a9bfb6d411e6554752 278 Gene3D G3DSA:3.90.220.20 54 272 5.5E-33 T 12-10-2018 JDM601_1362 6788df70228806a9bfb6d411e6554752 278 SUPERFAMILY SSF116734 53 276 4.25E-43 T 12-10-2018 JDM601_1362 6788df70228806a9bfb6d411e6554752 278 SUPERFAMILY SSF116734 2 54 3.6E-9 T 12-10-2018 JDM601_1362 6788df70228806a9bfb6d411e6554752 278 Pfam PF01420 Type I restriction modification DNA specificity domain 133 238 7.8E-8 T 12-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 JDM601_3295 f3b226301b7d1e77505a08dd603b4349 177 SUPERFAMILY SSF56784 38 153 6.31E-11 T 12-10-2018 IPR036412 HAD-like superfamily JDM601_3295 f3b226301b7d1e77505a08dd603b4349 177 Gene3D G3DSA:3.40.50.1000 30 172 9.9E-13 T 12-10-2018 IPR023214 HAD superfamily JDM601_2275 dd4d9ad3b681c5a8e8238c6956f20e3a 393 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 1 389 37.709 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 JDM601_2275 dd4d9ad3b681c5a8e8238c6956f20e3a 393 PRINTS PR00477 Phosphoglycerate kinase family signature 133 155 5.5E-67 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 JDM601_2275 dd4d9ad3b681c5a8e8238c6956f20e3a 393 PRINTS PR00477 Phosphoglycerate kinase family signature 341 352 5.5E-67 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 JDM601_2275 dd4d9ad3b681c5a8e8238c6956f20e3a 393 PRINTS PR00477 Phosphoglycerate kinase family signature 16 38 5.5E-67 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 JDM601_2275 dd4d9ad3b681c5a8e8238c6956f20e3a 393 PRINTS PR00477 Phosphoglycerate kinase family signature 186 205 5.5E-67 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 JDM601_2275 dd4d9ad3b681c5a8e8238c6956f20e3a 393 PRINTS PR00477 Phosphoglycerate kinase family signature 365 382 5.5E-67 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 JDM601_2275 dd4d9ad3b681c5a8e8238c6956f20e3a 393 PRINTS PR00477 Phosphoglycerate kinase family signature 163 185 5.5E-67 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 JDM601_2275 dd4d9ad3b681c5a8e8238c6956f20e3a 393 PRINTS PR00477 Phosphoglycerate kinase family signature 305 330 5.5E-67 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 JDM601_2275 dd4d9ad3b681c5a8e8238c6956f20e3a 393 PRINTS PR00477 Phosphoglycerate kinase family signature 94 109 5.5E-67 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 JDM601_2275 dd4d9ad3b681c5a8e8238c6956f20e3a 393 Gene3D G3DSA:3.40.50.1260 1 385 8.3E-133 T 12-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 JDM601_2275 dd4d9ad3b681c5a8e8238c6956f20e3a 393 Gene3D G3DSA:3.40.50.1260 165 379 8.3E-133 T 12-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 JDM601_2275 dd4d9ad3b681c5a8e8238c6956f20e3a 393 SUPERFAMILY SSF53748 1 388 3.3E-134 T 12-10-2018 IPR036043 Phosphoglycerate kinase superfamily GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 JDM601_2275 dd4d9ad3b681c5a8e8238c6956f20e3a 393 PIRSF PIRSF000724 1 392 1.4E-123 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 JDM601_2275 dd4d9ad3b681c5a8e8238c6956f20e3a 393 Pfam PF00162 Phosphoglycerate kinase 1 379 6.3E-135 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 JDM601_3208 9e4873a6a0e8014a730bbd3633c6a0ad 290 SUPERFAMILY SSF52402 155 289 1.42E-32 T 12-10-2018 JDM601_3208 9e4873a6a0e8014a730bbd3633c6a0ad 290 PRINTS PR01438 Universal stress protein signature 153 171 8.5E-20 T 12-10-2018 IPR006015 Universal stress protein A JDM601_3208 9e4873a6a0e8014a730bbd3633c6a0ad 290 PRINTS PR01438 Universal stress protein signature 247 259 8.5E-20 T 12-10-2018 IPR006015 Universal stress protein A JDM601_3208 9e4873a6a0e8014a730bbd3633c6a0ad 290 PRINTS PR01438 Universal stress protein signature 265 287 8.5E-20 T 12-10-2018 IPR006015 Universal stress protein A JDM601_3208 9e4873a6a0e8014a730bbd3633c6a0ad 290 SUPERFAMILY SSF52402 5 147 4.1E-35 T 12-10-2018 JDM601_3208 9e4873a6a0e8014a730bbd3633c6a0ad 290 Gene3D G3DSA:3.40.50.12370 2 289 4.7E-105 T 12-10-2018 JDM601_3208 9e4873a6a0e8014a730bbd3633c6a0ad 290 Pfam PF00582 Universal stress protein family 5 141 2.7E-29 T 12-10-2018 IPR006016 UspA JDM601_3208 9e4873a6a0e8014a730bbd3633c6a0ad 290 Pfam PF00582 Universal stress protein family 156 287 1.5E-27 T 12-10-2018 IPR006016 UspA JDM601_0932 87ea946f20d833adaaba410b5469a6b6 230 Gene3D G3DSA:3.40.50.2300 1 132 1.1E-41 T 12-10-2018 JDM601_0932 87ea946f20d833adaaba410b5469a6b6 230 SMART SM00862 150 225 1.0E-25 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 JDM601_0932 87ea946f20d833adaaba410b5469a6b6 230 SUPERFAMILY SSF52172 4 184 1.18E-44 T 12-10-2018 IPR011006 CheY-like superfamily JDM601_0932 87ea946f20d833adaaba410b5469a6b6 230 Pfam PF00072 Response regulator receiver domain 5 114 2.7E-32 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JDM601_0932 87ea946f20d833adaaba410b5469a6b6 230 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 225 8.3E-25 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 JDM601_0932 87ea946f20d833adaaba410b5469a6b6 230 SMART SM00448 3 114 4.7E-46 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JDM601_0932 87ea946f20d833adaaba410b5469a6b6 230 Gene3D G3DSA:1.10.10.10 133 229 5.2E-33 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JDM601_1441 423813db8de0902d788d38ad81e46f7c 862 Gene3D G3DSA:1.10.390.60 203 449 3.9E-70 T 12-10-2018 JDM601_1441 423813db8de0902d788d38ad81e46f7c 862 TIGRFAM TIGR02412 pepN_strep_liv: aminopeptidase N 5 848 9.4E-302 T 12-10-2018 IPR012778 Peptidase M1, aminopeptidase GO:0004177|GO:0006508 KEGG: 00480+3.4.11.2 JDM601_1441 423813db8de0902d788d38ad81e46f7c 862 Pfam PF11838 ERAP1-like C-terminal domain 528 842 9.7E-60 T 12-10-2018 IPR024571 ERAP1-like C-terminal domain JDM601_1441 423813db8de0902d788d38ad81e46f7c 862 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 296 311 4.6E-25 T 12-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 JDM601_1441 423813db8de0902d788d38ad81e46f7c 862 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 179 194 4.6E-25 T 12-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 JDM601_1441 423813db8de0902d788d38ad81e46f7c 862 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 315 327 4.6E-25 T 12-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 JDM601_1441 423813db8de0902d788d38ad81e46f7c 862 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 136 151 4.6E-25 T 12-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 JDM601_1441 423813db8de0902d788d38ad81e46f7c 862 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 262 272 4.6E-25 T 12-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 JDM601_1441 423813db8de0902d788d38ad81e46f7c 862 SUPERFAMILY SSF55486 208 454 5.13E-76 T 12-10-2018 JDM601_1441 423813db8de0902d788d38ad81e46f7c 862 SUPERFAMILY SSF63737 6 196 5.1E-42 T 12-10-2018 JDM601_1441 423813db8de0902d788d38ad81e46f7c 862 Gene3D G3DSA:2.60.40.1730 18 197 5.8E-30 T 12-10-2018 JDM601_1441 423813db8de0902d788d38ad81e46f7c 862 Pfam PF01433 Peptidase family M1 domain 226 444 8.2E-60 T 12-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 JDM601_1641 6ca734c331adaf1e54a0377fa39ac8f2 301 SMART SM00046 7 139 5.1E-4 T 12-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 JDM601_1641 6ca734c331adaf1e54a0377fa39ac8f2 301 SUPERFAMILY SSF111331 6 300 4.8E-70 T 12-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily JDM601_1641 6ca734c331adaf1e54a0377fa39ac8f2 301 Gene3D G3DSA:2.60.200.40 126 293 6.2E-68 T 12-10-2018 JDM601_1641 6ca734c331adaf1e54a0377fa39ac8f2 301 Gene3D G3DSA:3.40.50.10330 10 125 6.2E-68 T 12-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 JDM601_1641 6ca734c331adaf1e54a0377fa39ac8f2 301 Pfam PF00781 Diacylglycerol kinase catalytic domain 7 130 5.4E-28 T 12-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 JDM601_1540 d8f955e4fc4c1e8bf2bec5960f89f54b 447 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 7 256 2.0E-78 T 12-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal JDM601_1540 d8f955e4fc4c1e8bf2bec5960f89f54b 447 SUPERFAMILY SSF53901 6 379 4.52E-85 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 JDM601_1540 d8f955e4fc4c1e8bf2bec5960f89f54b 447 Gene3D G3DSA:3.40.47.10 4 446 7.3E-156 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 JDM601_1540 d8f955e4fc4c1e8bf2bec5960f89f54b 447 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 264 381 1.4E-36 T 12-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal JDM601_1540 d8f955e4fc4c1e8bf2bec5960f89f54b 447 SMART SM00825 Beta-ketoacyl synthase 9 438 3.0E-133 T 12-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain JDM601_2831 8f58c38da6048c78d3f2c3c76528ea7f 294 SUPERFAMILY SSF81606 9 233 7.06E-10 T 12-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 JDM601_2831 8f58c38da6048c78d3f2c3c76528ea7f 294 Pfam PF13672 Protein phosphatase 2C 2 217 9.3E-34 T 12-10-2018 JDM601_2831 8f58c38da6048c78d3f2c3c76528ea7f 294 Gene3D G3DSA:3.60.40.10 4 237 2.2E-5 T 12-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 JDM601_0051 691d049c2d0bfe2d7cae10b1949f6ad2 329 Gene3D G3DSA:3.40.50.300 80 303 9.1E-23 T 12-10-2018 JDM601_0051 691d049c2d0bfe2d7cae10b1949f6ad2 329 SUPERFAMILY SSF52540 81 294 1.5E-19 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_0574 e147c375061e45f8ff7c19f796537396 404 Gene3D G3DSA:1.10.4080.10 3 323 1.1E-70 T 12-10-2018 IPR036705 ADP-ribosylation/Crystallin J1 superfamily JDM601_0574 e147c375061e45f8ff7c19f796537396 404 SUPERFAMILY SSF101478 8 321 1.16E-46 T 12-10-2018 IPR036705 ADP-ribosylation/Crystallin J1 superfamily JDM601_0574 e147c375061e45f8ff7c19f796537396 404 Pfam PF03747 ADP-ribosylglycohydrolase 13 300 2.8E-48 T 12-10-2018 IPR005502 ADP-ribosylation/Crystallin J1 JDM601_0998 ee68e7b13a055187d1d007515b116ad2 99 Pfam PF00934 PE family 1 93 2.8E-31 T 12-10-2018 IPR000084 PE-PGRS family, N-terminal JDM601_0998 ee68e7b13a055187d1d007515b116ad2 99 Gene3D G3DSA:1.10.287.850 1 98 4.0E-31 T 12-10-2018 JDM601_0998 ee68e7b13a055187d1d007515b116ad2 99 SUPERFAMILY SSF140459 8 84 4.18E-22 T 12-10-2018 JDM601_2295 2c25bb1c83099f431804f6b66584f910 284 Gene3D G3DSA:3.40.50.12370 1 280 2.9E-92 T 12-10-2018 JDM601_2295 2c25bb1c83099f431804f6b66584f910 284 SUPERFAMILY SSF52402 1 138 7.2E-25 T 12-10-2018 JDM601_2295 2c25bb1c83099f431804f6b66584f910 284 Pfam PF00582 Universal stress protein family 1 136 9.4E-21 T 12-10-2018 IPR006016 UspA JDM601_2295 2c25bb1c83099f431804f6b66584f910 284 Pfam PF00582 Universal stress protein family 147 278 1.8E-26 T 12-10-2018 IPR006016 UspA JDM601_2295 2c25bb1c83099f431804f6b66584f910 284 PRINTS PR01438 Universal stress protein signature 256 278 4.4E-17 T 12-10-2018 IPR006015 Universal stress protein A JDM601_2295 2c25bb1c83099f431804f6b66584f910 284 PRINTS PR01438 Universal stress protein signature 238 250 4.4E-17 T 12-10-2018 IPR006015 Universal stress protein A JDM601_2295 2c25bb1c83099f431804f6b66584f910 284 PRINTS PR01438 Universal stress protein signature 144 162 4.4E-17 T 12-10-2018 IPR006015 Universal stress protein A JDM601_2295 2c25bb1c83099f431804f6b66584f910 284 SUPERFAMILY SSF52402 146 280 6.61E-33 T 12-10-2018 JDM601_0836 15eeaf8d1612105d8fa642fa44590d50 384 SUPERFAMILY SSF160935 37 356 1.09E-75 T 12-10-2018 JDM601_0836 15eeaf8d1612105d8fa642fa44590d50 384 Pfam PF06742 Protein of unknown function (DUF1214) 258 343 3.3E-16 T 12-10-2018 IPR010621 Domain of unknown function DUF1214 JDM601_0836 15eeaf8d1612105d8fa642fa44590d50 384 Gene3D G3DSA:2.60.120.1600 251 362 3.4E-23 T 12-10-2018 JDM601_0836 15eeaf8d1612105d8fa642fa44590d50 384 Pfam PF06863 Protein of unknown function (DUF1254) 72 183 2.0E-14 T 12-10-2018 IPR010679 Domain of unknown function DUF1254 JDM601_3869 ba1d5c74597fd86e56e65f5d95c8e9bb 416 Pfam PF02040 Arsenical pump membrane protein 8 408 2.3E-30 T 12-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 JDM601_3869 ba1d5c74597fd86e56e65f5d95c8e9bb 416 PRINTS PR00758 Arsenical pump membrane protein signature 212 237 6.5E-16 T 12-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 JDM601_3869 ba1d5c74597fd86e56e65f5d95c8e9bb 416 PRINTS PR00758 Arsenical pump membrane protein signature 383 407 6.5E-16 T 12-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 JDM601_3869 ba1d5c74597fd86e56e65f5d95c8e9bb 416 PRINTS PR00758 Arsenical pump membrane protein signature 350 375 6.5E-16 T 12-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 JDM601_3869 ba1d5c74597fd86e56e65f5d95c8e9bb 416 PRINTS PR00758 Arsenical pump membrane protein signature 105 129 6.5E-16 T 12-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 JDM601_1207 eda33c90a96ce777f65a0c43d1f2a46a 293 SUPERFAMILY SSF161098 10 284 1.16E-47 T 12-10-2018 IPR035906 MetI-like superfamily JDM601_1207 eda33c90a96ce777f65a0c43d1f2a46a 293 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 89 282 2.1E-11 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 JDM601_1207 eda33c90a96ce777f65a0c43d1f2a46a 293 Gene3D G3DSA:1.10.3720.10 5 281 5.5E-54 T 12-10-2018 IPR035906 MetI-like superfamily JDM601_3764 c7a85772b0ac2f339b2bafd668e0d82e 384 Gene3D G3DSA:1.20.140.10 233 380 1.2E-39 T 12-10-2018 JDM601_3764 c7a85772b0ac2f339b2bafd668e0d82e 384 SUPERFAMILY SSF56645 2 240 5.1E-76 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 JDM601_3764 c7a85772b0ac2f339b2bafd668e0d82e 384 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 229 377 8.3E-42 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 JDM601_3764 c7a85772b0ac2f339b2bafd668e0d82e 384 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 4 118 1.8E-26 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 JDM601_3764 c7a85772b0ac2f339b2bafd668e0d82e 384 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 124 136 - T 12-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 JDM601_3764 c7a85772b0ac2f339b2bafd668e0d82e 384 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 122 217 1.2E-22 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 JDM601_3764 c7a85772b0ac2f339b2bafd668e0d82e 384 Gene3D G3DSA:1.10.540.10 1 120 4.8E-35 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 JDM601_3764 c7a85772b0ac2f339b2bafd668e0d82e 384 SUPERFAMILY SSF47203 229 378 1.32E-40 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 JDM601_3764 c7a85772b0ac2f339b2bafd668e0d82e 384 Gene3D G3DSA:2.40.110.10 121 232 9.8E-41 T 12-10-2018 JDM601_3764 c7a85772b0ac2f339b2bafd668e0d82e 384 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 336 355 - T 12-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 JDM601_1738 289b194c82247401d8268f1184f46d7b 521 SUPERFAMILY SSF53244 358 515 3.14E-47 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 JDM601_1738 289b194c82247401d8268f1184f46d7b 521 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 18 514 31.459 T 12-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 JDM601_1738 289b194c82247401d8268f1184f46d7b 521 Pfam PF01225 Mur ligase family, catalytic domain 42 119 1.1E-7 T 12-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 JDM601_1738 289b194c82247401d8268f1184f46d7b 521 Gene3D G3DSA:3.40.1390.10 17 124 3.7E-29 T 12-10-2018 JDM601_1738 289b194c82247401d8268f1184f46d7b 521 SUPERFAMILY SSF53623 125 355 1.57E-65 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 JDM601_1738 289b194c82247401d8268f1184f46d7b 521 Pfam PF02875 Mur ligase family, glutamate ligase domain 358 445 5.7E-22 T 12-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 JDM601_1738 289b194c82247401d8268f1184f46d7b 521 Pfam PF08245 Mur ligase middle domain 134 338 9.3E-42 T 12-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 JDM601_1738 289b194c82247401d8268f1184f46d7b 521 Gene3D G3DSA:3.40.1190.10 125 359 2.8E-87 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 JDM601_1738 289b194c82247401d8268f1184f46d7b 521 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 41 514 4.6E-148 T 12-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 JDM601_1738 289b194c82247401d8268f1184f46d7b 521 SUPERFAMILY SSF63418 32 124 5.1E-18 T 12-10-2018 IPR035911 MurE/MurF, N-terminal JDM601_1738 289b194c82247401d8268f1184f46d7b 521 Gene3D G3DSA:3.90.190.20 360 520 3.6E-57 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 JDM601_0262 185a16db39d1492afdac2463f51e0a4b 214 SUPERFAMILY SSF46689 14 96 2.21E-16 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JDM601_0262 185a16db39d1492afdac2463f51e0a4b 214 Gene3D G3DSA:1.10.10.60 6 67 4.5E-14 T 12-10-2018 JDM601_0262 185a16db39d1492afdac2463f51e0a4b 214 Pfam PF00440 Bacterial regulatory proteins, tetR family 28 71 4.0E-13 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_0262 185a16db39d1492afdac2463f51e0a4b 214 Gene3D G3DSA:1.10.357.10 68 214 2.4E-32 T 12-10-2018 JDM601_0262 185a16db39d1492afdac2463f51e0a4b 214 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 47 70 5.0E-5 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_0262 185a16db39d1492afdac2463f51e0a4b 214 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 26 39 5.0E-5 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_0262 185a16db39d1492afdac2463f51e0a4b 214 SUPERFAMILY SSF48498 90 209 8.35E-29 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily JDM601_3614 037dcaf3fbc392f268fd83a19e63ea80 239 Pfam PF00486 Transcriptional regulatory protein, C terminal 161 235 3.8E-23 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 JDM601_3614 037dcaf3fbc392f268fd83a19e63ea80 239 Gene3D G3DSA:1.10.10.10 136 239 4.8E-33 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JDM601_3614 037dcaf3fbc392f268fd83a19e63ea80 239 Pfam PF00072 Response regulator receiver domain 15 124 4.3E-26 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JDM601_3614 037dcaf3fbc392f268fd83a19e63ea80 239 SMART SM00862 161 235 1.5E-23 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 JDM601_3614 037dcaf3fbc392f268fd83a19e63ea80 239 SMART SM00448 13 124 3.3E-42 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JDM601_3614 037dcaf3fbc392f268fd83a19e63ea80 239 SUPERFAMILY SSF46894 138 236 7.65E-27 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 JDM601_3614 037dcaf3fbc392f268fd83a19e63ea80 239 Gene3D G3DSA:3.40.50.2300 3 135 3.2E-36 T 12-10-2018 JDM601_3614 037dcaf3fbc392f268fd83a19e63ea80 239 SUPERFAMILY SSF52172 11 132 5.12E-41 T 12-10-2018 IPR011006 CheY-like superfamily JDM601_1404 a71581b038a70141e36f85eb08fb3f9f 660 SUPERFAMILY SSF51230 578 650 5.8E-17 T 12-10-2018 IPR011053 Single hybrid motif JDM601_1404 a71581b038a70141e36f85eb08fb3f9f 660 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 153 167 - T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 JDM601_1404 a71581b038a70141e36f85eb08fb3f9f 660 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 324 7.0E-82 T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 JDM601_1404 a71581b038a70141e36f85eb08fb3f9f 660 SUPERFAMILY SSF52440 1 113 2.66E-46 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily JDM601_1404 a71581b038a70141e36f85eb08fb3f9f 660 SMART SM00878 338 444 5.1E-50 T 12-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 JDM601_1404 a71581b038a70141e36f85eb08fb3f9f 660 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 608 625 - T 12-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 JDM601_1404 a71581b038a70141e36f85eb08fb3f9f 660 Gene3D G3DSA:3.30.470.130 1 450 9.8E-192 T 12-10-2018 JDM601_1404 a71581b038a70141e36f85eb08fb3f9f 660 SUPERFAMILY SSF56059 83 350 6.54E-70 T 12-10-2018 JDM601_1404 a71581b038a70141e36f85eb08fb3f9f 660 Pfam PF02785 Biotin carboxylase C-terminal domain 338 444 6.2E-34 T 12-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 JDM601_1404 a71581b038a70141e36f85eb08fb3f9f 660 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 3.2E-43 T 12-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 JDM601_1404 a71581b038a70141e36f85eb08fb3f9f 660 SUPERFAMILY SSF51246 333 446 1.67E-36 T 12-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 JDM601_1404 a71581b038a70141e36f85eb08fb3f9f 660 Gene3D G3DSA:2.40.50.100 583 651 3.3E-19 T 12-10-2018 JDM601_1404 a71581b038a70141e36f85eb08fb3f9f 660 Pfam PF00364 Biotin-requiring enzyme 585 650 5.8E-13 T 12-10-2018 IPR000089 Biotin/lipoyl attachment JDM601_1404 a71581b038a70141e36f85eb08fb3f9f 660 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 288 295 - T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 JDM601_0550 04d711c7d2f36fff6f407992313163f7 210 Gene3D G3DSA:3.40.30.10 31 206 2.8E-27 T 12-10-2018 JDM601_0550 04d711c7d2f36fff6f407992313163f7 210 Pfam PF13462 Thioredoxin 39 139 1.0E-9 T 12-10-2018 IPR012336 Thioredoxin-like fold JDM601_0550 04d711c7d2f36fff6f407992313163f7 210 SUPERFAMILY SSF52833 30 199 1.03E-15 T 12-10-2018 IPR036249 Thioredoxin-like superfamily JDM601_1181 14fb357747d58a0527a6ef26e5d9fa88 593 Gene3D G3DSA:3.30.300.30 453 552 3.1E-15 T 12-10-2018 JDM601_1181 14fb357747d58a0527a6ef26e5d9fa88 593 ProSitePatterns PS00455 Putative AMP-binding domain signature. 197 208 - T 12-10-2018 IPR020845 AMP-binding, conserved site JDM601_1181 14fb357747d58a0527a6ef26e5d9fa88 593 Pfam PF00501 AMP-binding enzyme 51 457 1.9E-66 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 JDM601_1181 14fb357747d58a0527a6ef26e5d9fa88 593 Gene3D G3DSA:3.40.50.12780 42 450 2.0E-69 T 12-10-2018 JDM601_1181 14fb357747d58a0527a6ef26e5d9fa88 593 Pfam PF13193 AMP-binding enzyme C-terminal domain 467 542 9.3E-11 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain JDM601_1181 14fb357747d58a0527a6ef26e5d9fa88 593 SUPERFAMILY SSF56801 44 554 2.75E-104 T 12-10-2018 JDM601_3561 aae4bf10d484428bd225da53adfa6c22 151 Pfam PF12802 MarR family 29 87 1.1E-12 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 JDM601_3561 aae4bf10d484428bd225da53adfa6c22 151 SMART SM00347 24 124 4.7E-16 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 JDM601_3561 aae4bf10d484428bd225da53adfa6c22 151 PRINTS PR00598 Bacterial regulatory protein MarR family signature 114 134 2.3E-8 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 JDM601_3561 aae4bf10d484428bd225da53adfa6c22 151 PRINTS PR00598 Bacterial regulatory protein MarR family signature 84 100 2.3E-8 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 JDM601_3561 aae4bf10d484428bd225da53adfa6c22 151 PRINTS PR00598 Bacterial regulatory protein MarR family signature 65 80 2.3E-8 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 JDM601_3561 aae4bf10d484428bd225da53adfa6c22 151 PRINTS PR00598 Bacterial regulatory protein MarR family signature 48 64 2.3E-8 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 JDM601_3561 aae4bf10d484428bd225da53adfa6c22 151 SUPERFAMILY SSF46785 3 136 3.05E-28 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JDM601_3561 aae4bf10d484428bd225da53adfa6c22 151 Gene3D G3DSA:1.10.10.10 1 138 3.7E-29 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JDM601_0226 1f21c95288c18e86616587576c6c736e 448 Gene3D G3DSA:3.40.47.10 12 448 1.1E-94 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 JDM601_0226 1f21c95288c18e86616587576c6c736e 448 Pfam PF00108 Thiolase, N-terminal domain 20 288 4.4E-41 T 12-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 JDM601_0226 1f21c95288c18e86616587576c6c736e 448 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 22 447 6.3E-114 T 12-10-2018 IPR002155 Thiolase GO:0016747 JDM601_0226 1f21c95288c18e86616587576c6c736e 448 SUPERFAMILY SSF53901 20 295 7.52E-52 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 JDM601_0226 1f21c95288c18e86616587576c6c736e 448 PIRSF PIRSF000429 16 448 1.6E-93 T 12-10-2018 IPR002155 Thiolase GO:0016747 JDM601_0226 1f21c95288c18e86616587576c6c736e 448 ProSitePatterns PS00099 Thiolases active site. 430 443 - T 12-10-2018 IPR020610 Thiolase, active site GO:0016747 JDM601_0226 1f21c95288c18e86616587576c6c736e 448 SUPERFAMILY SSF53901 295 447 2.98E-26 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 JDM601_0226 1f21c95288c18e86616587576c6c736e 448 Pfam PF02803 Thiolase, C-terminal domain 296 447 2.0E-26 T 12-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 JDM601_0738 8f1864642c73b2aea5dc968a6080666a 377 Pfam PF02803 Thiolase, C-terminal domain 254 374 2.5E-37 T 12-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 JDM601_0738 8f1864642c73b2aea5dc968a6080666a 377 ProSitePatterns PS00737 Thiolases signature 2. 322 338 - T 12-10-2018 IPR020613 Thiolase, conserved site GO:0016747 JDM601_0738 8f1864642c73b2aea5dc968a6080666a 377 SUPERFAMILY SSF53901 1 253 2.0E-75 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 JDM601_0738 8f1864642c73b2aea5dc968a6080666a 377 Gene3D G3DSA:3.40.47.10 123 373 1.2E-139 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 JDM601_0738 8f1864642c73b2aea5dc968a6080666a 377 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 2 374 4.3E-132 T 12-10-2018 IPR002155 Thiolase GO:0016747 JDM601_0738 8f1864642c73b2aea5dc968a6080666a 377 Gene3D G3DSA:3.40.47.10 2 259 1.2E-139 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 JDM601_0738 8f1864642c73b2aea5dc968a6080666a 377 SUPERFAMILY SSF53901 254 375 6.53E-38 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 JDM601_0738 8f1864642c73b2aea5dc968a6080666a 377 Pfam PF00108 Thiolase, N-terminal domain 1 246 2.8E-72 T 12-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 JDM601_0738 8f1864642c73b2aea5dc968a6080666a 377 PIRSF PIRSF000429 1 377 1.5E-120 T 12-10-2018 IPR002155 Thiolase GO:0016747 JDM601_3149 49c2ca47d442b2e0a28e321c39c7c309 296 Pfam PF12680 SnoaL-like domain 171 273 1.2E-6 T 12-10-2018 IPR037401 SnoaL-like domain JDM601_3149 49c2ca47d442b2e0a28e321c39c7c309 296 SUPERFAMILY SSF88946 4 83 1.57E-13 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 JDM601_3149 49c2ca47d442b2e0a28e321c39c7c309 296 Pfam PF04542 Sigma-70 region 2 4 66 4.1E-13 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 JDM601_3149 49c2ca47d442b2e0a28e321c39c7c309 296 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 4 152 1.8E-13 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 JDM601_3149 49c2ca47d442b2e0a28e321c39c7c309 296 SUPERFAMILY SSF88659 98 153 1.44E-8 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like JDM601_3149 49c2ca47d442b2e0a28e321c39c7c309 296 Gene3D G3DSA:3.10.450.50 163 285 2.2E-10 T 12-10-2018 JDM601_3149 49c2ca47d442b2e0a28e321c39c7c309 296 SUPERFAMILY SSF54427 159 285 6.59E-16 T 12-10-2018 IPR032710 NTF2-like domain superfamily JDM601_3149 49c2ca47d442b2e0a28e321c39c7c309 296 Gene3D G3DSA:1.10.10.10 98 157 5.9E-9 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JDM601_3149 49c2ca47d442b2e0a28e321c39c7c309 296 Pfam PF08281 Sigma-70, region 4 104 152 5.4E-9 T 12-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 JDM601_3149 49c2ca47d442b2e0a28e321c39c7c309 296 Gene3D G3DSA:1.10.1740.10 2 71 7.7E-8 T 12-10-2018 JDM601_0548 dcab2dc1ad4808c09699286b778b816a 261 Gene3D G3DSA:3.40.50.1820 1 247 5.4E-73 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_0548 dcab2dc1ad4808c09699286b778b816a 261 PRINTS PR00111 Alpha/beta hydrolase fold signature 26 41 7.7E-5 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 JDM601_0548 dcab2dc1ad4808c09699286b778b816a 261 PRINTS PR00111 Alpha/beta hydrolase fold signature 189 203 7.7E-5 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 JDM601_0548 dcab2dc1ad4808c09699286b778b816a 261 PRINTS PR00111 Alpha/beta hydrolase fold signature 69 82 7.7E-5 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 JDM601_0548 dcab2dc1ad4808c09699286b778b816a 261 PRINTS PR00111 Alpha/beta hydrolase fold signature 83 96 7.7E-5 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 JDM601_0548 dcab2dc1ad4808c09699286b778b816a 261 SUPERFAMILY SSF53474 1 244 1.38E-49 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_0548 dcab2dc1ad4808c09699286b778b816a 261 Pfam PF12697 Alpha/beta hydrolase family 1 237 1.1E-19 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 JDM601_1910 489cb8236242f3e7a8b8be264265bd2f 299 Pfam PF04116 Fatty acid hydroxylase superfamily 98 231 2.1E-26 T 12-10-2018 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0008610|GO:0016491|GO:0055114 JDM601_3587 6307603d7040dd93173d63a6f529788f 472 Pfam PF00206 Lyase 24 296 4.7E-22 T 12-10-2018 IPR022761 Fumarate lyase, N-terminal JDM601_3587 6307603d7040dd93173d63a6f529788f 472 Gene3D G3DSA:1.20.200.10 10 447 1.3E-149 T 12-10-2018 JDM601_3587 6307603d7040dd93173d63a6f529788f 472 ProSitePatterns PS00163 Fumarate lyases signature. 276 285 - T 12-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 JDM601_3587 6307603d7040dd93173d63a6f529788f 472 PRINTS PR00149 Fumarate lyase superfamily signature 94 112 1.2E-9 T 12-10-2018 IPR000362 Fumarate lyase family JDM601_3587 6307603d7040dd93173d63a6f529788f 472 PRINTS PR00149 Fumarate lyase superfamily signature 139 157 1.2E-9 T 12-10-2018 IPR000362 Fumarate lyase family JDM601_3587 6307603d7040dd93173d63a6f529788f 472 PRINTS PR00149 Fumarate lyase superfamily signature 276 292 1.2E-9 T 12-10-2018 IPR000362 Fumarate lyase family JDM601_3587 6307603d7040dd93173d63a6f529788f 472 Gene3D G3DSA:1.10.40.30 363 438 1.3E-149 T 12-10-2018 JDM601_3587 6307603d7040dd93173d63a6f529788f 472 SMART SM00998 365 450 1.1E-18 T 12-10-2018 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 JDM601_3587 6307603d7040dd93173d63a6f529788f 472 Pfam PF10397 Adenylosuccinate lyase C-terminus 366 448 3.4E-12 T 12-10-2018 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 JDM601_3587 6307603d7040dd93173d63a6f529788f 472 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 7 449 1.2E-136 T 12-10-2018 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 JDM601_3587 6307603d7040dd93173d63a6f529788f 472 Gene3D G3DSA:1.10.275.60 21 230 1.3E-149 T 12-10-2018 JDM601_3587 6307603d7040dd93173d63a6f529788f 472 SUPERFAMILY SSF48557 6 451 2.36E-80 T 12-10-2018 IPR008948 L-Aspartase-like GO:0003824 JDM601_2542 800d49c92eb37b5f638e9cda6990bb35 416 Gene3D G3DSA:2.40.110.10 147 265 1.9E-34 T 12-10-2018 JDM601_2542 800d49c92eb37b5f638e9cda6990bb35 416 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 150 162 - T 12-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 JDM601_2542 800d49c92eb37b5f638e9cda6990bb35 416 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 148 248 9.4E-24 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 JDM601_2542 800d49c92eb37b5f638e9cda6990bb35 416 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 265 414 1.9E-41 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 JDM601_2542 800d49c92eb37b5f638e9cda6990bb35 416 SUPERFAMILY SSF47203 265 415 2.74E-38 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 JDM601_2542 800d49c92eb37b5f638e9cda6990bb35 416 SUPERFAMILY SSF56645 5 259 4.84E-51 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 JDM601_2542 800d49c92eb37b5f638e9cda6990bb35 416 Gene3D G3DSA:1.10.540.10 2 146 5.2E-14 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 JDM601_2542 800d49c92eb37b5f638e9cda6990bb35 416 Gene3D G3DSA:1.20.140.10 270 416 7.9E-38 T 12-10-2018 JDM601_2542 800d49c92eb37b5f638e9cda6990bb35 416 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 142 2.2E-9 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 JDM601_0961 f135ceb00ad422ea89090ab1bcf60db5 391 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 142 160 1.9E-12 T 12-10-2018 JDM601_0961 f135ceb00ad422ea89090ab1bcf60db5 391 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 1.9E-12 T 12-10-2018 JDM601_0961 f135ceb00ad422ea89090ab1bcf60db5 391 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 248 270 1.9E-12 T 12-10-2018 JDM601_0961 f135ceb00ad422ea89090ab1bcf60db5 391 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 94 112 1.9E-12 T 12-10-2018 JDM601_0961 f135ceb00ad422ea89090ab1bcf60db5 391 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 5 27 4.5E-5 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 JDM601_0961 f135ceb00ad422ea89090ab1bcf60db5 391 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 138 162 4.5E-5 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 JDM601_0961 f135ceb00ad422ea89090ab1bcf60db5 391 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 95 103 4.5E-5 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 JDM601_0961 f135ceb00ad422ea89090ab1bcf60db5 391 Gene3D G3DSA:3.50.50.100 1 361 4.3E-70 T 12-10-2018 JDM601_0961 f135ceb00ad422ea89090ab1bcf60db5 391 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 284 3.9E-41 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JDM601_0961 f135ceb00ad422ea89090ab1bcf60db5 391 SUPERFAMILY SSF51905 1 301 5.3E-32 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_0888 e4fb44c2212c27cd7f6ac6b5ea913f8c 300 Pfam PF11583 P-aminobenzoate N-oxygenase AurF 10 284 3.0E-100 T 12-10-2018 IPR025859 P-aminobenzoate N-oxygenase AurF JDM601_0888 e4fb44c2212c27cd7f6ac6b5ea913f8c 300 Gene3D G3DSA:1.10.620.20 23 293 2.0E-7 T 12-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 JDM601_0888 e4fb44c2212c27cd7f6ac6b5ea913f8c 300 SUPERFAMILY SSF47240 32 228 1.01E-9 T 12-10-2018 IPR009078 Ferritin-like superfamily JDM601_1706 f7d062cfe6a6b0edab04cb2f61d360e3 189 Gene3D G3DSA:2.30.110.10 1 189 5.5E-54 T 12-10-2018 IPR012349 FMN-binding split barrel GO:0048037 JDM601_1706 f7d062cfe6a6b0edab04cb2f61d360e3 189 Pfam PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 149 189 7.7E-12 T 12-10-2018 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 JDM601_1706 f7d062cfe6a6b0edab04cb2f61d360e3 189 SUPERFAMILY SSF50475 2 189 1.73E-42 T 12-10-2018 JDM601_1706 f7d062cfe6a6b0edab04cb2f61d360e3 189 PIRSF PIRSF000190 1 189 2.8E-46 T 12-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 JDM601_1706 f7d062cfe6a6b0edab04cb2f61d360e3 189 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 14 90 3.9E-16 T 12-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 JDM601_1693 001167e6c090fbe6dc377a75aa4ad7a8 368 SUPERFAMILY SSF56752 8 364 2.62E-113 T 12-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 JDM601_1693 001167e6c090fbe6dc377a75aa4ad7a8 368 ProSitePatterns PS00770 Aminotransferases class-IV signature. 240 273 - T 12-10-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 JDM601_1693 001167e6c090fbe6dc377a75aa4ad7a8 368 PIRSF PIRSF006468 5 368 5.5E-133 T 12-10-2018 IPR005786 Branched-chain amino acid aminotransferase II GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767|Reactome: R-HSA-70895 JDM601_1693 001167e6c090fbe6dc377a75aa4ad7a8 368 Pfam PF01063 Amino-transferase class IV 76 324 1.5E-32 T 12-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 JDM601_1693 001167e6c090fbe6dc377a75aa4ad7a8 368 TIGRFAM TIGR01123 ilvE_II: branched-chain amino acid aminotransferase 50 366 4.1E-143 T 12-10-2018 IPR005786 Branched-chain amino acid aminotransferase II GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767|Reactome: R-HSA-70895 JDM601_1693 001167e6c090fbe6dc377a75aa4ad7a8 368 Gene3D G3DSA:3.30.470.10 31 363 1.3E-138 T 12-10-2018 JDM601_1693 001167e6c090fbe6dc377a75aa4ad7a8 368 Gene3D G3DSA:3.20.10.10 178 350 1.3E-138 T 12-10-2018 JDM601_0829 e997ba0051957b501dc35cbfc5c872b7 386 Pfam PF12706 Beta-lactamase superfamily domain 122 317 2.9E-52 T 12-10-2018 IPR001279 Metallo-beta-lactamase JDM601_0829 e997ba0051957b501dc35cbfc5c872b7 386 Gene3D G3DSA:3.60.15.10 94 363 2.2E-88 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like JDM601_0829 e997ba0051957b501dc35cbfc5c872b7 386 SUPERFAMILY SSF56281 104 353 5.11E-38 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like JDM601_3361 f3eff2cc38d0dd31a8035a8d6ec97fa0 269 Gene3D G3DSA:3.40.50.720 1 163 5.1E-41 T 12-10-2018 JDM601_3361 f3eff2cc38d0dd31a8035a8d6ec97fa0 269 PIRSF PIRSF000103 1 264 3.6E-53 T 12-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 JDM601_3361 f3eff2cc38d0dd31a8035a8d6ec97fa0 269 Gene3D G3DSA:1.10.1040.10 164 263 3.8E-11 T 12-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 JDM601_3361 f3eff2cc38d0dd31a8035a8d6ec97fa0 269 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 4 159 1.6E-32 T 12-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 JDM601_3361 f3eff2cc38d0dd31a8035a8d6ec97fa0 269 SUPERFAMILY SSF51735 4 162 7.03E-35 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_3361 f3eff2cc38d0dd31a8035a8d6ec97fa0 269 SUPERFAMILY SSF48179 164 261 2.38E-10 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 JDM601_3361 f3eff2cc38d0dd31a8035a8d6ec97fa0 269 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 165 262 2.8E-8 T 12-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 JDM601_2170 b8b64c5dac55711057f359b0b6ad8adb 134 TIGRFAM TIGR00026 hi_GC_TIGR00026: deazaflavin-dependent oxidoreductase, nitroreductase family 20 131 1.3E-40 T 12-10-2018 IPR004378 F420H(2)-dependent quinone reductase GO:0016491|GO:0055114 JDM601_2170 b8b64c5dac55711057f359b0b6ad8adb 134 SUPERFAMILY SSF50475 24 132 6.54E-6 T 12-10-2018 JDM601_2170 b8b64c5dac55711057f359b0b6ad8adb 134 Gene3D G3DSA:2.30.110.10 1 132 1.9E-57 T 12-10-2018 IPR012349 FMN-binding split barrel GO:0048037 JDM601_2170 b8b64c5dac55711057f359b0b6ad8adb 134 Pfam PF04075 F420H(2)-dependent quinone reductase 3 132 1.3E-56 T 12-10-2018 IPR004378 F420H(2)-dependent quinone reductase GO:0016491|GO:0055114 JDM601_2755 a96b366abee87deb4463031b85d2f401 325 SUPERFAMILY SSF51679 11 324 3.66E-58 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 JDM601_2755 a96b366abee87deb4463031b85d2f401 325 Pfam PF00296 Luciferase-like monooxygenase 17 191 1.1E-35 T 12-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 JDM601_2755 a96b366abee87deb4463031b85d2f401 325 Gene3D G3DSA:3.20.20.30 6 325 1.6E-66 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 JDM601_2092 a7bd55fefad4186509529bb7bc20c084 147 Gene3D G3DSA:1.10.1660.10 2 52 1.4E-10 T 12-10-2018 JDM601_2092 a7bd55fefad4186509529bb7bc20c084 147 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 4 31 6.2E-9 T 12-10-2018 IPR010093 SinI-like, DNA-binding domain GO:0003677 JDM601_2092 a7bd55fefad4186509529bb7bc20c084 147 Gene3D G3DSA:2.40.50.100 66 128 1.4E-17 T 12-10-2018 JDM601_2092 a7bd55fefad4186509529bb7bc20c084 147 SUPERFAMILY SSF50331 10 128 5.39E-18 T 12-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal JDM601_2092 a7bd55fefad4186509529bb7bc20c084 147 Pfam PF03459 TOBE domain 67 126 3.4E-11 T 12-10-2018 IPR005116 Transport-associated OB, type 1 JDM601_2092 a7bd55fefad4186509529bb7bc20c084 147 Pfam PF12728 Helix-turn-helix domain 5 52 3.6E-11 T 12-10-2018 JDM601_2699 915987ab2bc7a0e961ae8a45a9ac7ce0 135 ProDom PD080544 SYNTHASE 4.2.1.- LYASE L-ECTOINE DEHYDRATASE N-ACETYLDIAMINOBUTYRATE ECTOINE ENZYME SYNTHASE:ECTOINE ECTC 1 117 1.0E-41 T 12-10-2018 IPR010462 Ectoine synthase GO:0019491|GO:0033990 KEGG: 00260+4.2.1.108 JDM601_2699 915987ab2bc7a0e961ae8a45a9ac7ce0 135 Gene3D G3DSA:2.60.120.10 1 115 5.9E-45 T 12-10-2018 IPR014710 RmlC-like jelly roll fold JDM601_2699 915987ab2bc7a0e961ae8a45a9ac7ce0 135 Hamap MF_01255 L-ectoine synthase [ectC]. 1 127 37.024 T 12-10-2018 IPR010462 Ectoine synthase GO:0019491|GO:0033990 KEGG: 00260+4.2.1.108 JDM601_2699 915987ab2bc7a0e961ae8a45a9ac7ce0 135 Pfam PF06339 Ectoine synthase 1 125 2.8E-55 T 12-10-2018 IPR010462 Ectoine synthase GO:0019491|GO:0033990 KEGG: 00260+4.2.1.108 JDM601_2699 915987ab2bc7a0e961ae8a45a9ac7ce0 135 SUPERFAMILY SSF51182 11 125 1.4E-17 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily JDM601_0133 9f15ec706f60215383ff8ec2c0e3deb4 279 Pfam PF12151 Mannan-binding protein 20 55 2.5E-13 T 12-10-2018 IPR021992 Mannan-binding protein JDM601_0133 9f15ec706f60215383ff8ec2c0e3deb4 279 Pfam PF11738 Protein of unknown function (DUF3298) 148 247 8.8E-13 T 12-10-2018 IPR021729 Domain of unknown function DUF3298 JDM601_1924 d7722e091a8ed5c4ef0a65e6dd0e87d0 164 Pfam PF02577 Bifunctional nuclease 6 127 1.3E-46 T 12-10-2018 IPR003729 Bifunctional nuclease domain GO:0004518 JDM601_1924 d7722e091a8ed5c4ef0a65e6dd0e87d0 164 SUPERFAMILY SSF103256 2 135 6.15E-47 T 12-10-2018 IPR036104 Bifunctional nuclease superfamily GO:0004518 JDM601_1924 d7722e091a8ed5c4ef0a65e6dd0e87d0 164 Gene3D G3DSA:3.10.690.10 1 137 2.1E-47 T 12-10-2018 IPR036104 Bifunctional nuclease superfamily GO:0004518 JDM601_2144 4eeb7cae7a91746918d49023bb5ba0fb 207 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 6 206 31.57 T 12-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 JDM601_2144 4eeb7cae7a91746918d49023bb5ba0fb 207 PIRSF PIRSF000495 5 207 1.2E-62 T 12-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 JDM601_2144 4eeb7cae7a91746918d49023bb5ba0fb 207 Pfam PF00117 Glutamine amidotransferase class-I 9 202 1.2E-17 T 12-10-2018 IPR017926 Glutamine amidotransferase JDM601_2144 4eeb7cae7a91746918d49023bb5ba0fb 207 SUPERFAMILY SSF52317 7 205 5.28E-54 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like JDM601_2144 4eeb7cae7a91746918d49023bb5ba0fb 207 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 7 205 9.3E-67 T 12-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 JDM601_2144 4eeb7cae7a91746918d49023bb5ba0fb 207 Gene3D G3DSA:3.40.50.880 2 206 2.6E-67 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like JDM601_0539 ce8cef8155c0ab9deaf7eb897a5d8b5b 136 Gene3D G3DSA:3.10.180.10 9 120 8.0E-19 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase JDM601_0539 ce8cef8155c0ab9deaf7eb897a5d8b5b 136 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 8 111 1.3E-11 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain JDM601_0539 ce8cef8155c0ab9deaf7eb897a5d8b5b 136 SUPERFAMILY SSF54593 8 115 1.79E-21 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase JDM601_0026 a95943e6a246618acf9a408db8fc6b78 712 SMART SM00434 18 467 1.3E-131 T 12-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 JDM601_0026 a95943e6a246618acf9a408db8fc6b78 712 Gene3D G3DSA:2.120.10.90 571 684 4.6E-15 T 12-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal JDM601_0026 a95943e6a246618acf9a408db8fc6b78 712 SUPERFAMILY SSF56719 38 484 6.28E-118 T 12-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 JDM601_0026 a95943e6a246618acf9a408db8fc6b78 712 Gene3D G3DSA:1.10.268.10 372 460 4.1E-134 T 12-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 JDM601_0026 a95943e6a246618acf9a408db8fc6b78 712 SUPERFAMILY SSF101904 576 674 1.44E-14 T 12-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal JDM601_0026 a95943e6a246618acf9a408db8fc6b78 712 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 39 473 1.8E-115 T 12-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 JDM601_0026 a95943e6a246618acf9a408db8fc6b78 712 Gene3D G3DSA:3.30.1360.40 242 334 4.1E-134 T 12-10-2018 JDM601_0026 a95943e6a246618acf9a408db8fc6b78 712 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 645 662 6.2 T 12-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 JDM601_0026 a95943e6a246618acf9a408db8fc6b78 712 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 582 629 3.9E-7 T 12-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 JDM601_0026 a95943e6a246618acf9a408db8fc6b78 712 Gene3D G3DSA:3.90.199.10 39 490 4.1E-134 T 12-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 JDM601_2743 7014b5a9184a128fe4b1da75afd628e7 246 Pfam PF01553 Acyltransferase 55 170 5.4E-21 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 JDM601_2743 7014b5a9184a128fe4b1da75afd628e7 246 SUPERFAMILY SSF69593 13 184 3.66E-19 T 12-10-2018 JDM601_2743 7014b5a9184a128fe4b1da75afd628e7 246 SMART SM00563 62 174 2.0E-27 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 JDM601_0817 e2d8578894be9e944198dc43e4230485 122 SUPERFAMILY SSF54534 16 120 6.09E-35 T 12-10-2018 JDM601_0817 e2d8578894be9e944198dc43e4230485 122 Gene3D G3DSA:3.10.50.40 8 122 1.0E-32 T 12-10-2018 JDM601_0817 e2d8578894be9e944198dc43e4230485 122 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 32 119 5.8E-23 T 12-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain JDM601_1953 e95e84cc391375bd05a4d4172e47ffb5 801 Pfam PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase 404 578 1.9E-88 T 12-10-2018 IPR005593 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase GO:0005975|GO:0016832 JDM601_1953 e95e84cc391375bd05a4d4172e47ffb5 801 Gene3D G3DSA:3.40.50.920 609 798 4.0E-77 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 JDM601_1953 e95e84cc391375bd05a4d4172e47ffb5 801 Hamap MF_01403 Probable phosphoketolase. 10 791 40.873 T 12-10-2018 IPR023962 Probable phosphoketolase JDM601_1953 e95e84cc391375bd05a4d4172e47ffb5 801 SUPERFAMILY SSF52518 13 374 4.8E-76 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold JDM601_1953 e95e84cc391375bd05a4d4172e47ffb5 801 PIRSF PIRSF017245 1 791 0.0 T 12-10-2018 IPR005593 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase GO:0005975|GO:0016832 JDM601_1953 e95e84cc391375bd05a4d4172e47ffb5 801 Pfam PF09363 XFP C-terminal domain 589 789 1.5E-87 T 12-10-2018 IPR018969 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, C-terminal GO:0005975|GO:0016832 JDM601_1953 e95e84cc391375bd05a4d4172e47ffb5 801 Gene3D G3DSA:3.40.50.970 2 390 4.8E-176 T 12-10-2018 JDM601_1953 e95e84cc391375bd05a4d4172e47ffb5 801 ProSitePatterns PS60002 Phosphoketolase signature 1. 149 155 - T 12-10-2018 IPR019790 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, conserved site GO:0005975|GO:0016832 JDM601_1953 e95e84cc391375bd05a4d4172e47ffb5 801 SUPERFAMILY SSF52518 381 591 4.41E-26 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold JDM601_1953 e95e84cc391375bd05a4d4172e47ffb5 801 Gene3D G3DSA:3.40.50.970 392 608 2.2E-103 T 12-10-2018 JDM601_1953 e95e84cc391375bd05a4d4172e47ffb5 801 Pfam PF09364 XFP N-terminal domain 15 389 3.5E-186 T 12-10-2018 IPR018970 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, N-terminal JDM601_1953 e95e84cc391375bd05a4d4172e47ffb5 801 ProSitePatterns PS60003 Phosphoketolase signature 2. 162 180 - T 12-10-2018 IPR019789 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, thiamine diphosphate binding site GO:0005975|GO:0016832 JDM601_3015 a7837e38910630e9a662554bedf130d6 357 Gene3D G3DSA:3.90.550.10 3 237 2.1E-61 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases JDM601_3015 a7837e38910630e9a662554bedf130d6 357 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 303 334 5.2E-4 T 12-10-2018 IPR001451 Hexapeptide repeat JDM601_3015 a7837e38910630e9a662554bedf130d6 357 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 253 284 6.8E-5 T 12-10-2018 IPR001451 Hexapeptide repeat JDM601_3015 a7837e38910630e9a662554bedf130d6 357 SUPERFAMILY SSF53448 8 306 1.27E-68 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases JDM601_3015 a7837e38910630e9a662554bedf130d6 357 Pfam PF00483 Nucleotidyl transferase 8 233 5.9E-40 T 12-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 JDM601_3015 a7837e38910630e9a662554bedf130d6 357 Gene3D G3DSA:2.160.10.10 245 357 4.5E-18 T 12-10-2018 JDM601_0722 1ed302922efbc44b90758f6a90d31352 497 ProSitePatterns PS00455 Putative AMP-binding domain signature. 150 161 - T 12-10-2018 IPR020845 AMP-binding, conserved site JDM601_0722 1ed302922efbc44b90758f6a90d31352 497 SUPERFAMILY SSF56801 3 490 1.44E-127 T 12-10-2018 JDM601_0722 1ed302922efbc44b90758f6a90d31352 497 Gene3D G3DSA:3.30.300.310 394 492 7.0E-31 T 12-10-2018 JDM601_0722 1ed302922efbc44b90758f6a90d31352 497 Pfam PF00501 AMP-binding enzyme 8 398 1.8E-80 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 JDM601_0722 1ed302922efbc44b90758f6a90d31352 497 Pfam PF13193 AMP-binding enzyme C-terminal domain 407 478 3.9E-19 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain JDM601_0722 1ed302922efbc44b90758f6a90d31352 497 Gene3D G3DSA:3.40.50.12780 1 393 4.7E-93 T 12-10-2018 JDM601_1100 1c590bb3a3826061825d3d2f4b78c980 346 Pfam PF02470 MlaD protein 36 111 1.3E-18 T 12-10-2018 IPR003399 Mce/MlaD JDM601_1100 1c590bb3a3826061825d3d2f4b78c980 346 TIGRFAM TIGR00996 Mtu_fam_mce: virulence factor Mce family protein 14 265 4.3E-53 T 12-10-2018 IPR005693 Virulence factor Mce protein JDM601_3795 f38353bfdb9ec11b59714fd2470f2f6a 414 Pfam PF02470 MlaD protein 46 125 1.4E-6 T 12-10-2018 IPR003399 Mce/MlaD JDM601_3604 c628f86edeb03cea5fced3e86a301a09 451 PRINTS PR00465 E-class P450 group IV signature 248 274 9.0E-33 T 12-10-2018 IPR002403 Cytochrome P450, E-class, group IV GO:0004497|GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_3604 c628f86edeb03cea5fced3e86a301a09 451 PRINTS PR00465 E-class P450 group IV signature 354 372 9.0E-33 T 12-10-2018 IPR002403 Cytochrome P450, E-class, group IV GO:0004497|GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_3604 c628f86edeb03cea5fced3e86a301a09 451 PRINTS PR00465 E-class P450 group IV signature 379 395 9.0E-33 T 12-10-2018 IPR002403 Cytochrome P450, E-class, group IV GO:0004497|GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_3604 c628f86edeb03cea5fced3e86a301a09 451 PRINTS PR00465 E-class P450 group IV signature 305 321 9.0E-33 T 12-10-2018 IPR002403 Cytochrome P450, E-class, group IV GO:0004497|GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_3604 c628f86edeb03cea5fced3e86a301a09 451 PRINTS PR00465 E-class P450 group IV signature 29 52 9.0E-33 T 12-10-2018 IPR002403 Cytochrome P450, E-class, group IV GO:0004497|GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_3604 c628f86edeb03cea5fced3e86a301a09 451 PRINTS PR00465 E-class P450 group IV signature 395 413 9.0E-33 T 12-10-2018 IPR002403 Cytochrome P450, E-class, group IV GO:0004497|GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_3604 c628f86edeb03cea5fced3e86a301a09 451 PRINTS PR00465 E-class P450 group IV signature 338 352 9.0E-33 T 12-10-2018 IPR002403 Cytochrome P450, E-class, group IV GO:0004497|GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_3604 c628f86edeb03cea5fced3e86a301a09 451 Pfam PF00067 Cytochrome P450 19 444 4.5E-67 T 12-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_3604 c628f86edeb03cea5fced3e86a301a09 451 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 388 397 - T 12-10-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 JDM601_3604 c628f86edeb03cea5fced3e86a301a09 451 Gene3D G3DSA:1.10.630.10 3 451 6.2E-164 T 12-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_3604 c628f86edeb03cea5fced3e86a301a09 451 SUPERFAMILY SSF48264 17 449 2.75E-101 T 12-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_3604 c628f86edeb03cea5fced3e86a301a09 451 PRINTS PR00385 P450 superfamily signature 257 274 8.6E-11 T 12-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_3604 c628f86edeb03cea5fced3e86a301a09 451 PRINTS PR00385 P450 superfamily signature 310 321 8.6E-11 T 12-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_3604 c628f86edeb03cea5fced3e86a301a09 451 PRINTS PR00385 P450 superfamily signature 395 406 8.6E-11 T 12-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_3604 c628f86edeb03cea5fced3e86a301a09 451 PRINTS PR00385 P450 superfamily signature 386 395 8.6E-11 T 12-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_3859 fe9be74a869cb174d285662a7ca60618 710 SUPERFAMILY SSF51011 598 707 1.29E-24 T 12-10-2018 JDM601_3859 fe9be74a869cb174d285662a7ca60618 710 SUPERFAMILY SSF51445 141 584 1.45E-135 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily JDM601_3859 fe9be74a869cb174d285662a7ca60618 710 TIGRFAM TIGR02100 glgX_debranch: glycogen debranching enzyme GlgX 8 707 7.4E-297 T 12-10-2018 IPR011837 Glycogen debranching enzyme, GlgX type GO:0004133|GO:0004553|GO:0005980 JDM601_3859 fe9be74a869cb174d285662a7ca60618 710 Gene3D G3DSA:2.60.40.1180 601 710 2.5E-20 T 12-10-2018 IPR013780 Glycosyl hydrolase, all-beta JDM601_3859 fe9be74a869cb174d285662a7ca60618 710 Gene3D G3DSA:3.20.20.80 146 590 6.2E-185 T 12-10-2018 JDM601_3859 fe9be74a869cb174d285662a7ca60618 710 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 12 98 1.7E-18 T 12-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 JDM601_3859 fe9be74a869cb174d285662a7ca60618 710 Gene3D G3DSA:2.60.40.10 2 144 6.5E-41 T 12-10-2018 IPR013783 Immunoglobulin-like fold JDM601_3859 fe9be74a869cb174d285662a7ca60618 710 Pfam PF00128 Alpha amylase, catalytic domain 310 538 6.0E-7 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 JDM601_3859 fe9be74a869cb174d285662a7ca60618 710 Pfam PF00128 Alpha amylase, catalytic domain 196 284 8.5E-7 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 JDM601_3859 fe9be74a869cb174d285662a7ca60618 710 SMART SM00642 166 576 2.0E-7 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 JDM601_3859 fe9be74a869cb174d285662a7ca60618 710 SUPERFAMILY SSF81296 7 155 6.77E-41 T 12-10-2018 IPR014756 Immunoglobulin E-set JDM601_4319 4a7187ba390f1c78fd8384ca10f8e204 247 Gene3D G3DSA:3.40.50.300 8 246 4.4E-76 T 12-10-2018 JDM601_4319 4a7187ba390f1c78fd8384ca10f8e204 247 Pfam PF00005 ABC transporter 26 172 1.1E-34 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JDM601_4319 4a7187ba390f1c78fd8384ca10f8e204 247 SMART SM00382 35 220 9.9E-17 T 12-10-2018 IPR003593 AAA+ ATPase domain JDM601_4319 4a7187ba390f1c78fd8384ca10f8e204 247 SUPERFAMILY SSF52540 12 242 1.61E-73 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_4319 4a7187ba390f1c78fd8384ca10f8e204 247 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JDM601_4319 4a7187ba390f1c78fd8384ca10f8e204 247 PIRSF PIRSF039085 8 247 8.1E-97 T 12-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 JDM601_3307 c2bebf0590b40b0c3a81891841fb19b8 463 Pfam PF09851 Short C-terminal domain 428 455 1.5E-6 T 12-10-2018 IPR018649 SHOCT domain JDM601_3307 c2bebf0590b40b0c3a81891841fb19b8 463 Gene3D G3DSA:1.20.1260.20 1 174 1.7E-65 T 12-10-2018 IPR038332 PPE superfamily JDM601_3307 c2bebf0590b40b0c3a81891841fb19b8 463 Pfam PF12484 Polymorphic PE/PPE proteins C terminal 333 402 4.1E-10 T 12-10-2018 IPR022171 PPE family, C-terminal JDM601_3307 c2bebf0590b40b0c3a81891841fb19b8 463 SUPERFAMILY SSF140459 2 173 5.49E-61 T 12-10-2018 JDM601_3307 c2bebf0590b40b0c3a81891841fb19b8 463 Pfam PF00823 PPE family 6 161 2.4E-59 T 12-10-2018 IPR000030 PPE family JDM601_3027 b64ad0016c990326f70c423ea952e282 381 PRINTS PR00471 Acetate kinase family signature 9 20 2.6E-45 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 JDM601_3027 b64ad0016c990326f70c423ea952e282 381 PRINTS PR00471 Acetate kinase family signature 190 211 2.6E-45 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 JDM601_3027 b64ad0016c990326f70c423ea952e282 381 PRINTS PR00471 Acetate kinase family signature 160 173 2.6E-45 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 JDM601_3027 b64ad0016c990326f70c423ea952e282 381 PRINTS PR00471 Acetate kinase family signature 308 324 2.6E-45 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 JDM601_3027 b64ad0016c990326f70c423ea952e282 381 PRINTS PR00471 Acetate kinase family signature 362 374 2.6E-45 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 JDM601_3027 b64ad0016c990326f70c423ea952e282 381 PRINTS PR00471 Acetate kinase family signature 286 299 2.6E-45 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 JDM601_3027 b64ad0016c990326f70c423ea952e282 381 TIGRFAM TIGR00016 ackA: acetate kinase 8 380 1.5E-124 T 12-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 JDM601_3027 b64ad0016c990326f70c423ea952e282 381 Pfam PF00871 Acetokinase family 9 375 1.1E-134 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 JDM601_3027 b64ad0016c990326f70c423ea952e282 381 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 190 207 - T 12-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 JDM601_3027 b64ad0016c990326f70c423ea952e282 381 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 9 20 - T 12-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 JDM601_3027 b64ad0016c990326f70c423ea952e282 381 PIRSF PIRSF000722 5 381 2.0E-130 T 12-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 JDM601_3027 b64ad0016c990326f70c423ea952e282 381 Gene3D G3DSA:3.30.420.40 2 181 2.2E-68 T 12-10-2018 JDM601_3027 b64ad0016c990326f70c423ea952e282 381 SUPERFAMILY SSF53067 145 380 1.44E-79 T 12-10-2018 JDM601_3027 b64ad0016c990326f70c423ea952e282 381 Gene3D G3DSA:3.30.420.40 183 381 5.9E-76 T 12-10-2018 JDM601_3027 b64ad0016c990326f70c423ea952e282 381 SUPERFAMILY SSF53067 8 182 2.63E-58 T 12-10-2018 JDM601_3027 b64ad0016c990326f70c423ea952e282 381 Hamap MF_00020 Acetate kinase [ackA]. 1 381 158.037 T 12-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 JDM601_1662 65c4d177789ef9eb7c8b7e6100bd3267 164 SMART SM00226 6 153 6.7E-48 T 12-10-2018 IPR023485 Phosphotyrosine protein phosphatase I JDM601_1662 65c4d177789ef9eb7c8b7e6100bd3267 164 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 51 67 1.2E-18 T 12-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 JDM601_1662 65c4d177789ef9eb7c8b7e6100bd3267 164 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 8 25 1.2E-18 T 12-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 JDM601_1662 65c4d177789ef9eb7c8b7e6100bd3267 164 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 83 98 1.2E-18 T 12-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 JDM601_1662 65c4d177789ef9eb7c8b7e6100bd3267 164 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 125 140 1.2E-18 T 12-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 JDM601_1662 65c4d177789ef9eb7c8b7e6100bd3267 164 Gene3D G3DSA:3.40.50.2300 4 163 2.4E-47 T 12-10-2018 JDM601_1662 65c4d177789ef9eb7c8b7e6100bd3267 164 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 8 148 6.6E-36 T 12-10-2018 IPR023485 Phosphotyrosine protein phosphatase I JDM601_1662 65c4d177789ef9eb7c8b7e6100bd3267 164 SUPERFAMILY SSF52788 6 154 3.27E-40 T 12-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily JDM601_3948 33473ef5b7b2e670c4fa11bf44edd8d7 317 Pfam PF00561 alpha/beta hydrolase fold 48 303 1.6E-19 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 JDM601_3948 33473ef5b7b2e670c4fa11bf44edd8d7 317 PRINTS PR00111 Alpha/beta hydrolase fold signature 130 143 3.5E-6 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 JDM601_3948 33473ef5b7b2e670c4fa11bf44edd8d7 317 PRINTS PR00111 Alpha/beta hydrolase fold signature 72 87 3.5E-6 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 JDM601_3948 33473ef5b7b2e670c4fa11bf44edd8d7 317 PRINTS PR00111 Alpha/beta hydrolase fold signature 116 129 3.5E-6 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 JDM601_3948 33473ef5b7b2e670c4fa11bf44edd8d7 317 SUPERFAMILY SSF53474 14 315 2.34E-59 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_3948 33473ef5b7b2e670c4fa11bf44edd8d7 317 Gene3D G3DSA:3.40.50.1820 15 315 3.7E-64 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_3948 33473ef5b7b2e670c4fa11bf44edd8d7 317 PRINTS PR00412 Epoxide hydrolase signature 130 143 7.6E-13 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 JDM601_3948 33473ef5b7b2e670c4fa11bf44edd8d7 317 PRINTS PR00412 Epoxide hydrolase signature 291 313 7.6E-13 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 JDM601_3948 33473ef5b7b2e670c4fa11bf44edd8d7 317 PRINTS PR00412 Epoxide hydrolase signature 54 72 7.6E-13 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 JDM601_3948 33473ef5b7b2e670c4fa11bf44edd8d7 317 PRINTS PR00412 Epoxide hydrolase signature 116 129 7.6E-13 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 JDM601_2003 d61ea37bde873de59ebb478450fd9a9d 324 SUPERFAMILY SSF46689 218 266 4.71E-7 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JDM601_2003 d61ea37bde873de59ebb478450fd9a9d 324 Gene3D G3DSA:3.40.50.880 6 206 4.4E-59 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like JDM601_2003 d61ea37bde873de59ebb478450fd9a9d 324 Gene3D G3DSA:1.10.10.60 214 323 5.9E-22 T 12-10-2018 JDM601_2003 d61ea37bde873de59ebb478450fd9a9d 324 SUPERFAMILY SSF52317 9 197 7.94E-49 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like JDM601_2003 d61ea37bde873de59ebb478450fd9a9d 324 Pfam PF12833 Helix-turn-helix domain 239 317 8.4E-21 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 JDM601_2003 d61ea37bde873de59ebb478450fd9a9d 324 SMART SM00342 233 315 3.3E-22 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 JDM601_2003 d61ea37bde873de59ebb478450fd9a9d 324 Pfam PF01965 DJ-1/PfpI family 11 177 7.3E-25 T 12-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 JDM601_2003 d61ea37bde873de59ebb478450fd9a9d 324 SUPERFAMILY SSF46689 269 319 6.87E-7 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JDM601_0703 1995405849e2d5f686186dd92b7bb687 432 Gene3D G3DSA:1.20.140.10 249 400 3.5E-28 T 12-10-2018 JDM601_0703 1995405849e2d5f686186dd92b7bb687 432 SUPERFAMILY SSF56645 3 257 1.03E-63 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 JDM601_0703 1995405849e2d5f686186dd92b7bb687 432 Gene3D G3DSA:2.40.110.10 133 248 3.3E-33 T 12-10-2018 JDM601_0703 1995405849e2d5f686186dd92b7bb687 432 SUPERFAMILY SSF47203 242 398 5.48E-36 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 JDM601_0703 1995405849e2d5f686186dd92b7bb687 432 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 9 130 6.1E-15 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 JDM601_0703 1995405849e2d5f686186dd92b7bb687 432 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 244 393 1.4E-26 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 JDM601_0703 1995405849e2d5f686186dd92b7bb687 432 Gene3D G3DSA:1.10.540.10 1 131 6.5E-33 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 JDM601_0703 1995405849e2d5f686186dd92b7bb687 432 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 134 222 4.8E-19 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 JDM601_3174 06b9e8885c8d40189894f9b20f341551 141 SUPERFAMILY SSF50475 29 138 3.14E-13 T 12-10-2018 JDM601_3174 06b9e8885c8d40189894f9b20f341551 141 Pfam PF04075 F420H(2)-dependent quinone reductase 15 135 4.6E-39 T 12-10-2018 IPR004378 F420H(2)-dependent quinone reductase GO:0016491|GO:0055114 JDM601_3174 06b9e8885c8d40189894f9b20f341551 141 Gene3D G3DSA:2.30.110.10 3 139 5.0E-55 T 12-10-2018 IPR012349 FMN-binding split barrel GO:0048037 JDM601_3174 06b9e8885c8d40189894f9b20f341551 141 TIGRFAM TIGR00026 hi_GC_TIGR00026: deazaflavin-dependent oxidoreductase, nitroreductase family 26 137 5.8E-32 T 12-10-2018 IPR004378 F420H(2)-dependent quinone reductase GO:0016491|GO:0055114 JDM601_1434 f5a0b2a6b8c08a0a560fa722ce546a7b 509 SMART SM00642 4 388 2.5E-128 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 JDM601_1434 f5a0b2a6b8c08a0a560fa722ce546a7b 509 Pfam PF00128 Alpha amylase, catalytic domain 19 363 1.3E-80 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 JDM601_1434 f5a0b2a6b8c08a0a560fa722ce546a7b 509 SUPERFAMILY SSF51445 1 445 1.96E-123 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily JDM601_1434 f5a0b2a6b8c08a0a560fa722ce546a7b 509 Gene3D G3DSA:3.90.400.10 96 172 4.1E-151 T 12-10-2018 JDM601_1434 f5a0b2a6b8c08a0a560fa722ce546a7b 509 Gene3D G3DSA:3.20.20.80 1 442 4.1E-151 T 12-10-2018 JDM601_1312 fc8c7a9ecb7e113be1103fc54f01ce79 196 Pfam PF01923 Cobalamin adenosyltransferase 8 175 8.0E-57 T 12-10-2018 IPR016030 Cobalamin adenosyltransferase-like KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 JDM601_1312 fc8c7a9ecb7e113be1103fc54f01ce79 196 ProDom PD007457 TRANSFERASE ADENOSYLTRANSFERASE COBALAMIN ATP:COBIALAMIN ADENOSYLTRANSFERASE PDUO TYPE RELATED ACIDURIA YVQK 14 157 5.0E-50 T 12-10-2018 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 JDM601_1312 fc8c7a9ecb7e113be1103fc54f01ce79 196 Gene3D G3DSA:1.20.1200.10 29 193 7.1E-62 T 12-10-2018 IPR036451 Cobalamin adenosyltransferase-like superfamily KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 JDM601_1312 fc8c7a9ecb7e113be1103fc54f01ce79 196 TIGRFAM TIGR00636 PduO_Nterm: ATP:cob(I)alamin adenosyltransferase 9 180 2.7E-48 T 12-10-2018 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 JDM601_1312 fc8c7a9ecb7e113be1103fc54f01ce79 196 SUPERFAMILY SSF89028 7 184 1.29E-57 T 12-10-2018 IPR036451 Cobalamin adenosyltransferase-like superfamily KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 JDM601_2801 4b4cd2c4cb332ca8904614a15d8ceccc 436 Pfam PF01636 Phosphotransferase enzyme family 273 302 1.3E-5 T 12-10-2018 IPR002575 Aminoglycoside phosphotransferase JDM601_2801 4b4cd2c4cb332ca8904614a15d8ceccc 436 Pfam PF03109 ABC1 family 113 227 1.0E-30 T 12-10-2018 IPR004147 UbiB domain JDM601_2801 4b4cd2c4cb332ca8904614a15d8ceccc 436 SUPERFAMILY SSF56112 95 304 1.09E-23 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily JDM601_2839 5f608507dbaaf1d538347ae994519b8a 266 SUPERFAMILY SSF103481 25 118 9.68E-9 T 12-10-2018 JDM601_2839 5f608507dbaaf1d538347ae994519b8a 266 Pfam PF00892 EamA-like transporter family 7 117 2.2E-9 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 JDM601_2839 5f608507dbaaf1d538347ae994519b8a 266 Pfam PF00892 EamA-like transporter family 135 264 5.5E-12 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 JDM601_2839 5f608507dbaaf1d538347ae994519b8a 266 SUPERFAMILY SSF103481 174 264 3.53E-11 T 12-10-2018 JDM601_1755 2510a2d3ce9e7182384217644c1c3538 176 Pfam PF01161 Phosphatidylethanolamine-binding protein 42 173 2.5E-34 T 12-10-2018 IPR008914 Phosphatidylethanolamine-binding protein JDM601_1755 2510a2d3ce9e7182384217644c1c3538 176 TIGRFAM TIGR00481 TIGR00481: Raf kinase inhibitor-like protein, YbhB/YbcL family 41 172 1.1E-39 T 12-10-2018 IPR005247 YbhB/YbcL JDM601_1755 2510a2d3ce9e7182384217644c1c3538 176 SUPERFAMILY SSF49777 17 174 1.83E-48 T 12-10-2018 IPR036610 PEBP-like superfamily JDM601_1755 2510a2d3ce9e7182384217644c1c3538 176 Gene3D G3DSA:3.90.280.10 1 176 3.6E-58 T 12-10-2018 IPR036610 PEBP-like superfamily JDM601_4310 6993431c7b6f2c2c17ba4a46cc09d7fd 763 Pfam PF00905 Penicillin binding protein transpeptidase domain 383 644 8.2E-27 T 12-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 JDM601_4310 6993431c7b6f2c2c17ba4a46cc09d7fd 763 SUPERFAMILY SSF53955 98 304 5.91E-64 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily JDM601_4310 6993431c7b6f2c2c17ba4a46cc09d7fd 763 PRINTS PR01217 Proline rich extensin signature 723 744 4.0E-9 T 12-10-2018 JDM601_4310 6993431c7b6f2c2c17ba4a46cc09d7fd 763 PRINTS PR01217 Proline rich extensin signature 709 721 4.0E-9 T 12-10-2018 JDM601_4310 6993431c7b6f2c2c17ba4a46cc09d7fd 763 PRINTS PR01217 Proline rich extensin signature 744 760 4.0E-9 T 12-10-2018 JDM601_4310 6993431c7b6f2c2c17ba4a46cc09d7fd 763 Pfam PF00912 Transglycosylase 113 289 2.2E-55 T 12-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 JDM601_4310 6993431c7b6f2c2c17ba4a46cc09d7fd 763 Gene3D G3DSA:3.40.710.10 321 701 6.4E-144 T 12-10-2018 JDM601_4310 6993431c7b6f2c2c17ba4a46cc09d7fd 763 SUPERFAMILY SSF56601 271 690 1.19E-90 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like JDM601_4310 6993431c7b6f2c2c17ba4a46cc09d7fd 763 Gene3D G3DSA:1.10.3810.10 107 304 2.3E-62 T 12-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 JDM601_1510 1d1fd0f99eed7837ad2700b2c96e4e5a 683 Gene3D G3DSA:1.50.10.10 295 672 6.0E-86 T 12-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 JDM601_1510 1d1fd0f99eed7837ad2700b2c96e4e5a 683 SUPERFAMILY SSF48208 266 663 3.4E-95 T 12-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 JDM601_1510 1d1fd0f99eed7837ad2700b2c96e4e5a 683 Pfam PF00723 Glycosyl hydrolases family 15 295 607 1.1E-47 T 12-10-2018 IPR011613 GH15-like domain Reactome: R-HSA-70221 JDM601_0826 be933058dcc66e9d5ff13c4498397ae0 492 Gene3D G3DSA:3.90.226.10 2 227 9.8E-54 T 12-10-2018 JDM601_0826 be933058dcc66e9d5ff13c4498397ae0 492 SUPERFAMILY SSF52096 239 489 4.36E-45 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily JDM601_0826 be933058dcc66e9d5ff13c4498397ae0 492 SUPERFAMILY SSF52096 5 227 7.0E-55 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily JDM601_0826 be933058dcc66e9d5ff13c4498397ae0 492 Gene3D G3DSA:3.90.226.10 232 491 5.7E-57 T 12-10-2018 JDM601_0826 be933058dcc66e9d5ff13c4498397ae0 492 Pfam PF01039 Carboxyl transferase domain 17 477 1.5E-64 T 12-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 JDM601_0826 be933058dcc66e9d5ff13c4498397ae0 492 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 71 85 4.8E-24 T 12-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 JDM601_0826 be933058dcc66e9d5ff13c4498397ae0 492 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 105 123 4.8E-24 T 12-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 JDM601_0826 be933058dcc66e9d5ff13c4498397ae0 492 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 142 159 4.8E-24 T 12-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 JDM601_0826 be933058dcc66e9d5ff13c4498397ae0 492 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 193 202 4.8E-24 T 12-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 JDM601_0826 be933058dcc66e9d5ff13c4498397ae0 492 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 171 182 4.8E-24 T 12-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 JDM601_2980 9fe7261965a009c92f3dae29acee6487 362 SUPERFAMILY SSF55469 250 342 1.07E-8 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 JDM601_2980 9fe7261965a009c92f3dae29acee6487 362 Gene3D G3DSA:3.40.109.10 9 113 4.4E-35 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 JDM601_2980 9fe7261965a009c92f3dae29acee6487 362 Gene3D G3DSA:3.40.109.10 126 343 8.8E-47 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 JDM601_2980 9fe7261965a009c92f3dae29acee6487 362 SUPERFAMILY SSF55469 15 98 1.57E-9 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 JDM601_2980 9fe7261965a009c92f3dae29acee6487 362 Pfam PF00881 Nitroreductase family 253 320 3.8E-5 T 12-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 JDM601_4041 407e9f3cc78f47432c2b7fcfc9722b13 506 SUPERFAMILY SSF55874 343 506 6.29E-40 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JDM601_4041 407e9f3cc78f47432c2b7fcfc9722b13 506 PRINTS PR00344 Bacterial sensor protein C-terminal signature 452 462 6.4E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JDM601_4041 407e9f3cc78f47432c2b7fcfc9722b13 506 PRINTS PR00344 Bacterial sensor protein C-terminal signature 492 505 6.4E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JDM601_4041 407e9f3cc78f47432c2b7fcfc9722b13 506 PRINTS PR00344 Bacterial sensor protein C-terminal signature 469 487 6.4E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JDM601_4041 407e9f3cc78f47432c2b7fcfc9722b13 506 PRINTS PR00344 Bacterial sensor protein C-terminal signature 434 448 6.4E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 JDM601_4041 407e9f3cc78f47432c2b7fcfc9722b13 506 SMART SM00304 214 276 5.9E-9 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JDM601_4041 407e9f3cc78f47432c2b7fcfc9722b13 506 Gene3D G3DSA:1.10.287.130 218 354 2.7E-25 T 12-10-2018 JDM601_4041 407e9f3cc78f47432c2b7fcfc9722b13 506 SUPERFAMILY SSF47384 269 355 1.51E-19 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 JDM601_4041 407e9f3cc78f47432c2b7fcfc9722b13 506 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 397 506 1.9E-22 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JDM601_4041 407e9f3cc78f47432c2b7fcfc9722b13 506 SMART SM00387 397 506 6.1E-35 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JDM601_4041 407e9f3cc78f47432c2b7fcfc9722b13 506 Pfam PF00672 HAMP domain 214 271 3.6E-10 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JDM601_4041 407e9f3cc78f47432c2b7fcfc9722b13 506 SMART SM00388 284 354 2.5E-22 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JDM601_4041 407e9f3cc78f47432c2b7fcfc9722b13 506 Gene3D G3DSA:3.30.565.10 369 506 2.4E-39 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JDM601_4041 407e9f3cc78f47432c2b7fcfc9722b13 506 Pfam PF00512 His Kinase A (phospho-acceptor) domain 286 354 3.0E-21 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JDM601_1962 c2b37a6c7cc46af6f0a03831f27b6dbc 179 Gene3D G3DSA:1.20.1290.10 1 176 1.5E-65 T 12-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 JDM601_1962 c2b37a6c7cc46af6f0a03831f27b6dbc 179 Hamap MF_01676 Alkyl hydroperoxide reductase AhpD [ahpD]. 1 179 80.322 T 12-10-2018 IPR004674 Alkylhydroperoxidase AhpD GO:0006979|GO:0032843|GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 JDM601_1962 c2b37a6c7cc46af6f0a03831f27b6dbc 179 TIGRFAM TIGR00777 ahpD: alkylhydroperoxidase, AhpD family 2 175 2.2E-79 T 12-10-2018 IPR004674 Alkylhydroperoxidase AhpD GO:0006979|GO:0032843|GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 JDM601_1962 c2b37a6c7cc46af6f0a03831f27b6dbc 179 SUPERFAMILY SSF69118 3 174 2.88E-48 T 12-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 JDM601_1962 c2b37a6c7cc46af6f0a03831f27b6dbc 179 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 111 159 1.5E-16 T 12-10-2018 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 JDM601_1962 c2b37a6c7cc46af6f0a03831f27b6dbc 179 Pfam PF02627 Carboxymuconolactone decarboxylase family 101 170 8.8E-14 T 12-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 JDM601_4307 2965c4e4e36e2b520b544c0b06757aa2 173 Hamap MF_00984 Single-stranded DNA-binding protein. 5 114 31.792 T 12-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 JDM601_4307 2965c4e4e36e2b520b544c0b06757aa2 173 Pfam PF00436 Single-strand binding protein family 7 108 3.0E-30 T 12-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 JDM601_4307 2965c4e4e36e2b520b544c0b06757aa2 173 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 6 173 9.5E-37 T 12-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 JDM601_4307 2965c4e4e36e2b520b544c0b06757aa2 173 Gene3D G3DSA:2.40.50.140 3 121 5.6E-44 T 12-10-2018 JDM601_4307 2965c4e4e36e2b520b544c0b06757aa2 173 SUPERFAMILY SSF50249 7 173 2.67E-48 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold JDM601_3581 4dec78af32ede227bcdc2ede9f41f847 298 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 9 287 23.759 T 12-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 JDM601_3581 4dec78af32ede227bcdc2ede9f41f847 298 Pfam PF01259 SAICAR synthetase 12 258 3.1E-96 T 12-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 JDM601_3581 4dec78af32ede227bcdc2ede9f41f847 298 SUPERFAMILY SSF56104 7 289 7.19E-96 T 12-10-2018 JDM601_3581 4dec78af32ede227bcdc2ede9f41f847 298 ProSitePatterns PS01058 SAICAR synthetase signature 2. 195 203 - T 12-10-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 JDM601_3581 4dec78af32ede227bcdc2ede9f41f847 298 TIGRFAM TIGR00081 purC: phosphoribosylaminoimidazolesuccinocarboxamide synthase 10 287 4.0E-72 T 12-10-2018 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234 JDM601_3581 4dec78af32ede227bcdc2ede9f41f847 298 Gene3D G3DSA:3.30.200.20 1 94 2.8E-31 T 12-10-2018 JDM601_3581 4dec78af32ede227bcdc2ede9f41f847 298 Gene3D G3DSA:3.30.470.20 95 239 3.7E-60 T 12-10-2018 JDM601_0167 8ac75761d8c6caef90e2852a8802a979 399 Pfam PF03706 Lysylphosphatidylglycerol synthase TM region 30 330 1.5E-29 T 12-10-2018 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD JDM601_0380 0b4b07d583df0141d9492ac57a52b694 336 TIGRFAM TIGR03557 F420_G6P_family: F420-dependent oxidoreductase, G6PDH family 6 333 1.1E-76 T 12-10-2018 IPR019945 F420-dependent glucose-6-phosphate dehydrogenase-related JDM601_0380 0b4b07d583df0141d9492ac57a52b694 336 Hamap MF_02123 F420-dependent glucose-6-phosphate dehydrogenase [fgd]. 3 335 68.789 T 12-10-2018 IPR019944 F420-dependent glucose-6-phosphate dehydrogenase JDM601_0380 0b4b07d583df0141d9492ac57a52b694 336 Gene3D G3DSA:3.20.20.30 2 335 5.8E-100 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 JDM601_0380 0b4b07d583df0141d9492ac57a52b694 336 SUPERFAMILY SSF51679 4 333 2.22E-68 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 JDM601_0380 0b4b07d583df0141d9492ac57a52b694 336 TIGRFAM TIGR03554 F420_G6P_DH: glucose-6-phosphate dehydrogenase (coenzyme-F420) 3 333 9.1E-219 T 12-10-2018 IPR019944 F420-dependent glucose-6-phosphate dehydrogenase JDM601_0380 0b4b07d583df0141d9492ac57a52b694 336 Pfam PF00296 Luciferase-like monooxygenase 12 307 4.1E-63 T 12-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 JDM601_1433 1dcc42369f3f5aa875e7c2a6ddb9ef4c 142 Gene3D G3DSA:3.10.129.10 6 142 6.4E-28 T 12-10-2018 JDM601_1433 1dcc42369f3f5aa875e7c2a6ddb9ef4c 142 Pfam PF13279 Thioesterase-like superfamily 16 125 4.5E-10 T 12-10-2018 JDM601_1433 1dcc42369f3f5aa875e7c2a6ddb9ef4c 142 SUPERFAMILY SSF54637 10 140 9.19E-23 T 12-10-2018 IPR029069 HotDog domain superfamily JDM601_3976 ba7ce4cca642a846d6c8a68a60017385 235 Pfam PF07510 Protein of unknown function (DUF1524) 94 230 1.6E-10 T 12-10-2018 IPR011089 Domain of unknown function DUF1524 JDM601_2692 3d9c37c0e16be0640fa2a1540289ab36 233 SMART SM00346 7 92 1.8E-24 T 12-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 JDM601_2692 3d9c37c0e16be0640fa2a1540289ab36 233 Gene3D G3DSA:3.30.450.40 72 232 7.2E-40 T 12-10-2018 IPR029016 GAF-like domain superfamily JDM601_2692 3d9c37c0e16be0640fa2a1540289ab36 233 SUPERFAMILY SSF46785 7 75 8.91E-13 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JDM601_2692 3d9c37c0e16be0640fa2a1540289ab36 233 Pfam PF09339 IclR helix-turn-helix domain 10 57 2.7E-12 T 12-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 JDM601_2692 3d9c37c0e16be0640fa2a1540289ab36 233 Gene3D G3DSA:1.10.10.10 2 71 3.3E-16 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JDM601_2692 3d9c37c0e16be0640fa2a1540289ab36 233 Pfam PF01614 Bacterial transcriptional regulator 124 229 1.6E-18 T 12-10-2018 IPR014757 Transcription regulator IclR, C-terminal JDM601_2692 3d9c37c0e16be0640fa2a1540289ab36 233 SUPERFAMILY SSF55781 63 233 3.53E-37 T 12-10-2018 JDM601_0445 714fb2f7e873cdd723496ccfa021cf26 134 Pfam PF05610 Protein of unknown function (DUF779) 16 112 8.1E-45 T 12-10-2018 IPR008497 Protein of unknown function DUF779 JDM601_0445 714fb2f7e873cdd723496ccfa021cf26 134 PIRSF PIRSF009151 1 128 2.1E-64 T 12-10-2018 IPR008497 Protein of unknown function DUF779 JDM601_1710 345c626295c4da99ce9108986e7a5a18 199 Pfam PF00510 Cytochrome c oxidase subunit III 19 197 1.9E-26 T 12-10-2018 IPR000298 Cytochrome c oxidase subunit III-like GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 JDM601_1710 345c626295c4da99ce9108986e7a5a18 199 Gene3D G3DSA:1.20.120.80 16 199 5.1E-54 T 12-10-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 JDM601_1710 345c626295c4da99ce9108986e7a5a18 199 SUPERFAMILY SSF81452 8 197 5.62E-56 T 12-10-2018 IPR035973 Cytochrome c oxidase subunit III-like superfamily GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 JDM601_0360 c65d31a63a0761653dd5c4748714b245 295 Pfam PF01545 Cation efflux family 18 208 6.4E-34 T 12-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 JDM601_0360 c65d31a63a0761653dd5c4748714b245 295 Gene3D G3DSA:1.20.1510.10 14 208 1.6E-29 T 12-10-2018 IPR027469 Cation efflux transmembrane domain superfamily JDM601_0360 c65d31a63a0761653dd5c4748714b245 295 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 16 285 6.7E-63 T 12-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 JDM601_0360 c65d31a63a0761653dd5c4748714b245 295 SUPERFAMILY SSF161111 15 210 3.4E-42 T 12-10-2018 IPR027469 Cation efflux transmembrane domain superfamily JDM601_0360 c65d31a63a0761653dd5c4748714b245 295 SUPERFAMILY SSF160240 213 285 1.83E-6 T 12-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 JDM601_0427 d25d64944d4e4c18034d8e9bf73d6ff8 233 Gene3D G3DSA:3.90.230.10 10 202 1.4E-15 T 12-10-2018 JDM601_0427 d25d64944d4e4c18034d8e9bf73d6ff8 233 SUPERFAMILY SSF55920 17 231 3.79E-19 T 12-10-2018 IPR036005 Creatinase/aminopeptidase-like JDM601_0427 d25d64944d4e4c18034d8e9bf73d6ff8 233 Pfam PF00557 Metallopeptidase family M24 17 177 4.0E-16 T 12-10-2018 IPR000994 Peptidase M24 JDM601_0108 e9be49fa89077aecc2ebe5542fff8328 300 Gene3D G3DSA:3.10.129.90 16 288 1.8E-47 T 12-10-2018 JDM601_0108 e9be49fa89077aecc2ebe5542fff8328 300 SUPERFAMILY SSF54637 18 122 1.48E-17 T 12-10-2018 IPR029069 HotDog domain superfamily JDM601_0108 e9be49fa89077aecc2ebe5542fff8328 300 Pfam PF13622 Thioesterase-like superfamily 53 284 1.5E-26 T 12-10-2018 JDM601_0108 e9be49fa89077aecc2ebe5542fff8328 300 SUPERFAMILY SSF54637 134 286 7.23E-22 T 12-10-2018 IPR029069 HotDog domain superfamily JDM601_3579 e3ee10d04ac59d28a5d14bf2b9c44df5 162 SUPERFAMILY SSF52833 2 160 2.89E-50 T 12-10-2018 IPR036249 Thioredoxin-like superfamily JDM601_3579 e3ee10d04ac59d28a5d14bf2b9c44df5 162 PIRSF PIRSF000303 1 162 7.2E-58 T 12-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 JDM601_3579 e3ee10d04ac59d28a5d14bf2b9c44df5 162 Gene3D G3DSA:3.40.30.10 1 162 6.5E-53 T 12-10-2018 JDM601_3579 e3ee10d04ac59d28a5d14bf2b9c44df5 162 ProSitePatterns PS00460 Glutathione peroxidases active site. 23 38 - T 12-10-2018 IPR029759 Glutathione peroxidase active site Reactome: R-HSA-3299685 JDM601_3579 e3ee10d04ac59d28a5d14bf2b9c44df5 162 PRINTS PR01011 Glutathione peroxidase family signature 122 131 4.4E-17 T 12-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 JDM601_3579 e3ee10d04ac59d28a5d14bf2b9c44df5 162 PRINTS PR01011 Glutathione peroxidase family signature 21 38 4.4E-17 T 12-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 JDM601_3579 e3ee10d04ac59d28a5d14bf2b9c44df5 162 PRINTS PR01011 Glutathione peroxidase family signature 56 72 4.4E-17 T 12-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 JDM601_3579 e3ee10d04ac59d28a5d14bf2b9c44df5 162 Pfam PF00255 Glutathione peroxidase 9 109 1.3E-37 T 12-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 JDM601_4063 1ad6b2a9322661601deaacf7d7335b86 297 SUPERFAMILY SSF82771 197 285 1.57E-6 T 12-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 JDM601_3257 1883ccac97f49106e740cc60c3d3859d 915 PRINTS PR01228 Eggshell protein signature 254 269 3.9E-7 T 12-10-2018 JDM601_3257 1883ccac97f49106e740cc60c3d3859d 915 PRINTS PR01228 Eggshell protein signature 312 330 3.9E-7 T 12-10-2018 JDM601_3257 1883ccac97f49106e740cc60c3d3859d 915 PRINTS PR01228 Eggshell protein signature 191 202 3.9E-7 T 12-10-2018 JDM601_3257 1883ccac97f49106e740cc60c3d3859d 915 PRINTS PR01228 Eggshell protein signature 281 291 3.9E-7 T 12-10-2018 JDM601_0382 6f3498d722bb17002cb13d73b80a04f2 317 Gene3D G3DSA:3.40.190.10 170 266 1.9E-70 T 12-10-2018 JDM601_0382 6f3498d722bb17002cb13d73b80a04f2 317 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 83 302 7.0E-51 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF JDM601_0382 6f3498d722bb17002cb13d73b80a04f2 317 SUPERFAMILY SSF53850 71 301 5.77E-53 T 12-10-2018 JDM601_0382 6f3498d722bb17002cb13d73b80a04f2 317 Gene3D G3DSA:3.40.190.10 84 301 1.9E-70 T 12-10-2018 JDM601_0382 6f3498d722bb17002cb13d73b80a04f2 317 SMART SM00062 82 304 1.7E-69 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF JDM601_4175 807acaded6a4716bf5b56f62281b8ba1 483 SUPERFAMILY SSF51971 344 467 7.06E-11 T 12-10-2018 JDM601_4175 807acaded6a4716bf5b56f62281b8ba1 483 Gene3D G3DSA:3.50.50.60 253 398 3.7E-33 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_4175 807acaded6a4716bf5b56f62281b8ba1 483 SUPERFAMILY SSF51971 143 399 3.65E-68 T 12-10-2018 JDM601_4175 807acaded6a4716bf5b56f62281b8ba1 483 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 146 454 1.1E-27 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JDM601_4175 807acaded6a4716bf5b56f62281b8ba1 483 Gene3D G3DSA:3.40.50.720 143 252 2.3E-17 T 12-10-2018 JDM601_4175 807acaded6a4716bf5b56f62281b8ba1 483 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 26 127 1.7E-22 T 12-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 JDM601_4175 807acaded6a4716bf5b56f62281b8ba1 483 TIGRFAM TIGR01317 GOGAT_sm_gam: glutamate synthase, NADH/NADPH, small subunit 3 472 1.8E-219 T 12-10-2018 IPR006005 Glutamate synthase, NADH/NADPH, small subunit 1 GO:0006537|GO:0016639|GO:0055114 JDM601_4175 807acaded6a4716bf5b56f62281b8ba1 483 Gene3D G3DSA:1.10.1060.10 14 142 7.4E-20 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 JDM601_4175 807acaded6a4716bf5b56f62281b8ba1 483 SUPERFAMILY SSF46548 9 155 3.66E-38 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 JDM601_4175 807acaded6a4716bf5b56f62281b8ba1 483 PRINTS PR00419 Adrenodoxin reductase family signature 211 221 6.5E-24 T 12-10-2018 JDM601_4175 807acaded6a4716bf5b56f62281b8ba1 483 PRINTS PR00419 Adrenodoxin reductase family signature 146 168 6.5E-24 T 12-10-2018 JDM601_4175 807acaded6a4716bf5b56f62281b8ba1 483 PRINTS PR00419 Adrenodoxin reductase family signature 285 299 6.5E-24 T 12-10-2018 JDM601_4175 807acaded6a4716bf5b56f62281b8ba1 483 PRINTS PR00419 Adrenodoxin reductase family signature 169 182 6.5E-24 T 12-10-2018 JDM601_3002 80379ae3d8384b7e00d47a30c87e1aa6 359 Pfam PF09617 CRISPR-associated protein GSU0053 (Cas_GSU0053) 21 190 1.8E-36 T 12-10-2018 IPR013403 CRISPR-associated protein GSU0053 JDM601_1698 94708bc17e9853fe428ed00679a7aa05 365 Pfam PF02595 Glycerate kinase family 157 344 1.3E-48 T 12-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 JDM601_1698 94708bc17e9853fe428ed00679a7aa05 365 Pfam PF02595 Glycerate kinase family 1 155 4.2E-43 T 12-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 JDM601_1698 94708bc17e9853fe428ed00679a7aa05 365 PIRSF PIRSF006078 155 354 1.3E-49 T 12-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 JDM601_1698 94708bc17e9853fe428ed00679a7aa05 365 PIRSF PIRSF006078 1 161 3.1E-39 T 12-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 JDM601_1698 94708bc17e9853fe428ed00679a7aa05 365 Gene3D G3DSA:3.90.1510.10 40 156 1.4E-31 T 12-10-2018 IPR018193 Glycerate kinase, flavodoxin-like fold GO:0008887|GO:0031388 JDM601_1698 94708bc17e9853fe428ed00679a7aa05 365 Gene3D G3DSA:3.90.1510.10 157 254 2.1E-25 T 12-10-2018 IPR018193 Glycerate kinase, flavodoxin-like fold GO:0008887|GO:0031388 JDM601_1698 94708bc17e9853fe428ed00679a7aa05 365 SUPERFAMILY SSF110738 1 344 2.88E-81 T 12-10-2018 IPR036129 Glycerate kinase superfamily GO:0008887|GO:0031388 JDM601_3321 5c8588ee2e4c81eebc0df9fa34835816 105 SUPERFAMILY SSF50104 1 102 6.02E-31 T 12-10-2018 IPR008991 Translation protein SH3-like domain superfamily JDM601_3321 5c8588ee2e4c81eebc0df9fa34835816 105 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 1 99 20.633 T 12-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JDM601_3321 5c8588ee2e4c81eebc0df9fa34835816 105 Gene3D G3DSA:2.30.30.30 1 104 1.2E-35 T 12-10-2018 IPR014722 Ribosomal protein L2, domain 2 JDM601_3321 5c8588ee2e4c81eebc0df9fa34835816 105 Pfam PF00467 KOW motif 5 35 1.2E-9 T 12-10-2018 IPR005824 KOW JDM601_3321 5c8588ee2e4c81eebc0df9fa34835816 105 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 1 105 2.0E-37 T 12-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JDM601_3321 5c8588ee2e4c81eebc0df9fa34835816 105 SMART SM00739 2 29 4.5E-5 T 12-10-2018 IPR005824 KOW JDM601_3321 5c8588ee2e4c81eebc0df9fa34835816 105 ProSitePatterns PS01108 Ribosomal protein L24 signature. 6 23 - T 12-10-2018 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 JDM601_3321 5c8588ee2e4c81eebc0df9fa34835816 105 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 38 105 9.0E-26 T 12-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JDM601_0504 553c1b33c1bac90f77152a17b5a530eb 459 SUPERFAMILY SSF69742 3 158 2.09E-42 T 12-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 JDM601_0504 553c1b33c1bac90f77152a17b5a530eb 459 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 2 426 26.022 T 12-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 JDM601_0504 553c1b33c1bac90f77152a17b5a530eb 459 SUPERFAMILY SSF51735 164 312 5.15E-22 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_0504 553c1b33c1bac90f77152a17b5a530eb 459 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 7 156 1.5E-43 T 12-10-2018 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 JDM601_0504 553c1b33c1bac90f77152a17b5a530eb 459 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 3 429 1.2E-140 T 12-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 JDM601_0504 553c1b33c1bac90f77152a17b5a530eb 459 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 173 315 4.8E-28 T 12-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase JDM601_0504 553c1b33c1bac90f77152a17b5a530eb 459 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 330 428 1.5E-20 T 12-10-2018 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 JDM601_0504 553c1b33c1bac90f77152a17b5a530eb 459 PIRSF PIRSF000445 1 439 1.4E-133 T 12-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 JDM601_0504 553c1b33c1bac90f77152a17b5a530eb 459 ProSitePatterns PS00747 Glutamyl-tRNA reductase signature. 99 122 - T 12-10-2018 IPR018214 Glutamyl-tRNA reductase, conserved site GO:0008883|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 JDM601_0504 553c1b33c1bac90f77152a17b5a530eb 459 Gene3D G3DSA:3.30.460.30 1 158 2.7E-54 T 12-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 JDM601_0504 553c1b33c1bac90f77152a17b5a530eb 459 Gene3D G3DSA:3.40.50.720 162 316 2.1E-39 T 12-10-2018 JDM601_0504 553c1b33c1bac90f77152a17b5a530eb 459 SUPERFAMILY SSF69075 329 429 1.31E-15 T 12-10-2018 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 JDM601_1824 29f8f375eea90419cac0960dc2460261 262 SUPERFAMILY SSF75217 105 258 1.44E-40 T 12-10-2018 IPR029028 Alpha/beta knot methyltransferases JDM601_1824 29f8f375eea90419cac0960dc2460261 262 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 28 96 6.7E-7 T 12-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 JDM601_1824 29f8f375eea90419cac0960dc2460261 262 Gene3D G3DSA:3.30.1330.30 5 100 2.6E-15 T 12-10-2018 IPR029064 50S ribosomal protein L30e-like JDM601_1824 29f8f375eea90419cac0960dc2460261 262 Gene3D G3DSA:3.40.1280.10 102 262 3.7E-50 T 12-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal JDM601_1824 29f8f375eea90419cac0960dc2460261 262 Pfam PF00588 SpoU rRNA Methylase family 109 251 5.0E-35 T 12-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 JDM601_1824 29f8f375eea90419cac0960dc2460261 262 SMART SM00967 28 98 1.3E-12 T 12-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 JDM601_1824 29f8f375eea90419cac0960dc2460261 262 SUPERFAMILY SSF55315 6 96 9.42E-19 T 12-10-2018 IPR029064 50S ribosomal protein L30e-like JDM601_3762 c06b7b969bc97520f515554cd7db30e3 657 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 610 627 - T 12-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 JDM601_3762 c06b7b969bc97520f515554cd7db30e3 657 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 283 290 - T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 JDM601_3762 c06b7b969bc97520f515554cd7db30e3 657 SUPERFAMILY SSF52440 2 112 2.88E-36 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily JDM601_3762 c06b7b969bc97520f515554cd7db30e3 657 SUPERFAMILY SSF56059 82 342 4.42E-68 T 12-10-2018 JDM601_3762 c06b7b969bc97520f515554cd7db30e3 657 Pfam PF00289 Biotin carboxylase, N-terminal domain 2 108 2.9E-35 T 12-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 JDM601_3762 c06b7b969bc97520f515554cd7db30e3 657 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 151 165 - T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 JDM601_3762 c06b7b969bc97520f515554cd7db30e3 657 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 319 2.4E-68 T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 JDM601_3762 c06b7b969bc97520f515554cd7db30e3 657 Pfam PF02785 Biotin carboxylase C-terminal domain 333 440 3.8E-30 T 12-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 JDM601_3762 c06b7b969bc97520f515554cd7db30e3 657 SUPERFAMILY SSF51230 587 654 3.8E-19 T 12-10-2018 IPR011053 Single hybrid motif JDM601_3762 c06b7b969bc97520f515554cd7db30e3 657 SMART SM00878 333 439 4.4E-40 T 12-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 JDM601_3762 c06b7b969bc97520f515554cd7db30e3 657 Gene3D G3DSA:2.40.50.100 588 655 9.5E-22 T 12-10-2018 JDM601_3762 c06b7b969bc97520f515554cd7db30e3 657 Gene3D G3DSA:3.30.470.130 1 447 1.3E-177 T 12-10-2018 JDM601_3762 c06b7b969bc97520f515554cd7db30e3 657 Pfam PF00364 Biotin-requiring enzyme 589 653 2.7E-15 T 12-10-2018 IPR000089 Biotin/lipoyl attachment JDM601_3762 c06b7b969bc97520f515554cd7db30e3 657 SUPERFAMILY SSF51246 328 444 3.45E-34 T 12-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 JDM601_1346 45068de236f2f6c18e8b5483f7cdacd8 113 Pfam PF12823 Domain of unknown function (DUF3817) 21 102 5.9E-24 T 12-10-2018 IPR023845 Domain of unknown function DUF3817, transmembrane JDM601_1346 45068de236f2f6c18e8b5483f7cdacd8 113 TIGRFAM TIGR03954 integ_memb_HG: integral membrane protein 21 101 4.9E-24 T 12-10-2018 IPR023845 Domain of unknown function DUF3817, transmembrane JDM601_0851 17d97fbfaa2b44f95a5d4969b48ac0ee 379 Gene3D G3DSA:1.10.540.10 1 120 1.3E-26 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 JDM601_0851 17d97fbfaa2b44f95a5d4969b48ac0ee 379 SUPERFAMILY SSF56645 1 224 2.49E-43 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 JDM601_0851 17d97fbfaa2b44f95a5d4969b48ac0ee 379 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 118 8.6E-12 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 JDM601_0851 17d97fbfaa2b44f95a5d4969b48ac0ee 379 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 123 213 7.8E-12 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 JDM601_0851 17d97fbfaa2b44f95a5d4969b48ac0ee 379 Gene3D G3DSA:1.20.140.10 234 375 8.2E-27 T 12-10-2018 JDM601_0851 17d97fbfaa2b44f95a5d4969b48ac0ee 379 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 230 367 8.0E-22 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 JDM601_0851 17d97fbfaa2b44f95a5d4969b48ac0ee 379 SUPERFAMILY SSF47203 229 374 6.77E-32 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 JDM601_0851 17d97fbfaa2b44f95a5d4969b48ac0ee 379 Gene3D G3DSA:2.40.110.10 121 233 2.4E-21 T 12-10-2018 JDM601_1718 d62dbe31e3a6d51125b48bf29a17b853 145 Pfam PF10604 Polyketide cyclase / dehydrase and lipid transport 5 143 2.3E-14 T 12-10-2018 IPR019587 Polyketide cyclase/dehydrase JDM601_1718 d62dbe31e3a6d51125b48bf29a17b853 145 SUPERFAMILY SSF55961 6 144 1.98E-30 T 12-10-2018 JDM601_1718 d62dbe31e3a6d51125b48bf29a17b853 145 Gene3D G3DSA:3.30.530.20 2 145 3.6E-32 T 12-10-2018 IPR023393 START-like domain superfamily JDM601_2811 3892b66d074b56fca728eb482ee5bfbb 418 Gene3D G3DSA:3.30.9.10 143 362 4.5E-39 T 12-10-2018 JDM601_2811 3892b66d074b56fca728eb482ee5bfbb 418 Gene3D G3DSA:3.50.50.60 116 402 4.5E-39 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_2811 3892b66d074b56fca728eb482ee5bfbb 418 Pfam PF01266 FAD dependent oxidoreductase 14 400 7.0E-55 T 12-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 JDM601_2811 3892b66d074b56fca728eb482ee5bfbb 418 SUPERFAMILY SSF54373 276 363 5.49E-10 T 12-10-2018 JDM601_2811 3892b66d074b56fca728eb482ee5bfbb 418 Gene3D G3DSA:3.50.50.60 15 77 1.7E-15 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_2811 3892b66d074b56fca728eb482ee5bfbb 418 SUPERFAMILY SSF51971 12 404 4.12E-38 T 12-10-2018 JDM601_3281 34e829a4946070d4bc337eaf7ebf76a2 201 SMART SM01390 3 90 2.5E-42 T 12-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 JDM601_3281 34e829a4946070d4bc337eaf7ebf76a2 201 Gene3D G3DSA:1.10.1050.10 6 201 3.6E-72 T 12-10-2018 JDM601_3281 34e829a4946070d4bc337eaf7ebf76a2 201 ProSitePatterns PS00632 Ribosomal protein S4 signature. 89 113 - T 12-10-2018 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6790901|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JDM601_3281 34e829a4946070d4bc337eaf7ebf76a2 201 SMART SM00363 91 153 1.3E-17 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JDM601_3281 34e829a4946070d4bc337eaf7ebf76a2 201 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 201 6.6E-82 T 12-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 JDM601_3281 34e829a4946070d4bc337eaf7ebf76a2 201 Gene3D G3DSA:3.10.290.10 90 186 3.6E-72 T 12-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 JDM601_3281 34e829a4946070d4bc337eaf7ebf76a2 201 Pfam PF01479 S4 domain 92 137 7.3E-18 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JDM601_3281 34e829a4946070d4bc337eaf7ebf76a2 201 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 90 7.7E-29 T 12-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 JDM601_3281 34e829a4946070d4bc337eaf7ebf76a2 201 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 201 34.515 T 12-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 JDM601_3281 34e829a4946070d4bc337eaf7ebf76a2 201 SUPERFAMILY SSF55174 3 201 2.09E-62 T 12-10-2018 JDM601_0399 d3337e22047ed6949f423af719da9f15 1345 SUPERFAMILY SSF81653 574 683 1.44E-26 T 12-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 JDM601_0399 d3337e22047ed6949f423af719da9f15 1345 Gene3D G3DSA:3.40.1110.10 792 802 6.6E-60 T 12-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 JDM601_0399 d3337e22047ed6949f423af719da9f15 1345 SUPERFAMILY SSF56784 780 1146 1.5E-44 T 12-10-2018 IPR036412 HAD-like superfamily JDM601_0399 d3337e22047ed6949f423af719da9f15 1345 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 1009 1124 9.2E-25 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 JDM601_0399 d3337e22047ed6949f423af719da9f15 1345 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 550 811 2.3E-29 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 JDM601_0399 d3337e22047ed6949f423af719da9f15 1345 Gene3D G3DSA:3.40.50.1000 779 791 6.6E-60 T 12-10-2018 IPR023214 HAD superfamily JDM601_0399 d3337e22047ed6949f423af719da9f15 1345 Gene3D G3DSA:1.20.1110.10 514 778 6.6E-60 T 12-10-2018 JDM601_0399 d3337e22047ed6949f423af719da9f15 1345 Gene3D G3DSA:1.20.1110.10 1088 1176 9.3E-70 T 12-10-2018 JDM601_0399 d3337e22047ed6949f423af719da9f15 1345 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 1074 1099 4.1E-10 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 JDM601_0399 d3337e22047ed6949f423af719da9f15 1345 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 889 907 4.1E-10 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 JDM601_0399 d3337e22047ed6949f423af719da9f15 1345 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 1042 1058 4.1E-10 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 JDM601_0399 d3337e22047ed6949f423af719da9f15 1345 Gene3D G3DSA:3.40.50.1000 948 1087 9.3E-70 T 12-10-2018 IPR023214 HAD superfamily JDM601_0399 d3337e22047ed6949f423af719da9f15 1345 Gene3D G3DSA:2.70.150.10 510 685 6.6E-60 T 12-10-2018 JDM601_0399 d3337e22047ed6949f423af719da9f15 1345 Gene3D G3DSA:3.40.1110.10 891 947 9.3E-70 T 12-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 JDM601_0399 d3337e22047ed6949f423af719da9f15 1345 Pfam PF00689 Cation transporting ATPase, C-terminus 1127 1271 3.1E-13 T 12-10-2018 IPR006068 Cation-transporting P-type ATPase, C-terminal Reactome: R-HSA-936837 JDM601_0399 d3337e22047ed6949f423af719da9f15 1345 SUPERFAMILY SSF81665 508 1274 3.4E-47 T 12-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 JDM601_0399 d3337e22047ed6949f423af719da9f15 1345 Pfam PF00702 haloacid dehalogenase-like hydrolase 778 1055 6.5E-23 T 12-10-2018 JDM601_0399 d3337e22047ed6949f423af719da9f15 1345 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 622 636 7.1E-28 T 12-10-2018 JDM601_0399 d3337e22047ed6949f423af719da9f15 1345 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 962 972 7.1E-28 T 12-10-2018 JDM601_0399 d3337e22047ed6949f423af719da9f15 1345 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 782 796 7.1E-28 T 12-10-2018 JDM601_0399 d3337e22047ed6949f423af719da9f15 1345 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 940 951 7.1E-28 T 12-10-2018 JDM601_0399 d3337e22047ed6949f423af719da9f15 1345 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 1066 1078 7.1E-28 T 12-10-2018 JDM601_0399 d3337e22047ed6949f423af719da9f15 1345 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 1042 1061 7.1E-28 T 12-10-2018 JDM601_0399 d3337e22047ed6949f423af719da9f15 1345 Pfam PF00122 E1-E2 ATPase 573 761 2.9E-42 T 12-10-2018 JDM601_0732 14d4a8c860deb0e1da2cfcb571ee9dbd 407 Gene3D G3DSA:1.10.540.10 23 137 9.8E-27 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 JDM601_0732 14d4a8c860deb0e1da2cfcb571ee9dbd 407 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 143 235 1.2E-21 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 JDM601_0732 14d4a8c860deb0e1da2cfcb571ee9dbd 407 SUPERFAMILY SSF47203 247 402 1.55E-16 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 JDM601_0732 14d4a8c860deb0e1da2cfcb571ee9dbd 407 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 247 397 2.2E-16 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 JDM601_0732 14d4a8c860deb0e1da2cfcb571ee9dbd 407 Gene3D G3DSA:2.40.110.10 142 250 7.9E-38 T 12-10-2018 JDM601_0732 14d4a8c860deb0e1da2cfcb571ee9dbd 407 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 26 138 1.2E-18 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 JDM601_0732 14d4a8c860deb0e1da2cfcb571ee9dbd 407 Gene3D G3DSA:1.20.140.10 251 404 6.5E-28 T 12-10-2018 JDM601_0732 14d4a8c860deb0e1da2cfcb571ee9dbd 407 SUPERFAMILY SSF56645 26 259 1.31E-65 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 JDM601_0556 7b3358e0ed97d6126d571c4b145aa359 331 Gene3D G3DSA:1.10.600.10 6 331 1.1E-103 T 12-10-2018 IPR008949 Isoprenoid synthase domain superfamily JDM601_0556 7b3358e0ed97d6126d571c4b145aa359 331 SUPERFAMILY SSF48576 18 330 3.53E-81 T 12-10-2018 IPR008949 Isoprenoid synthase domain superfamily JDM601_0556 7b3358e0ed97d6126d571c4b145aa359 331 Pfam PF00348 Polyprenyl synthetase 39 280 1.7E-63 T 12-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 JDM601_0556 7b3358e0ed97d6126d571c4b145aa359 331 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 211 223 - T 12-10-2018 IPR033749 Polyprenyl synthetase, conserved site JDM601_4119 2798fd145dc8d56995e4d2a4ea459bbd 355 SMART SM01110 87 338 1.6E-60 T 12-10-2018 IPR000675 Cutinase/acetylxylan esterase GO:0016787 JDM601_4119 2798fd145dc8d56995e4d2a4ea459bbd 355 Gene3D G3DSA:3.40.50.1820 87 355 3.6E-80 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_4119 2798fd145dc8d56995e4d2a4ea459bbd 355 Pfam PF01083 Cutinase 127 294 1.0E-14 T 12-10-2018 IPR000675 Cutinase/acetylxylan esterase GO:0016787 JDM601_4119 2798fd145dc8d56995e4d2a4ea459bbd 355 SUPERFAMILY SSF53474 88 294 2.14E-28 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_3483 f1b1457c23861e05f44ccccb49531bed 446 PRINTS PR00359 B-class P450 signature 298 325 2.4E-22 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3483 f1b1457c23861e05f44ccccb49531bed 446 PRINTS PR00359 B-class P450 signature 326 341 2.4E-22 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3483 f1b1457c23861e05f44ccccb49531bed 446 PRINTS PR00359 B-class P450 signature 356 367 2.4E-22 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3483 f1b1457c23861e05f44ccccb49531bed 446 PRINTS PR00359 B-class P450 signature 347 356 2.4E-22 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3483 f1b1457c23861e05f44ccccb49531bed 446 PRINTS PR00359 B-class P450 signature 142 158 2.4E-22 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3483 f1b1457c23861e05f44ccccb49531bed 446 PRINTS PR00359 B-class P450 signature 281 292 2.4E-22 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3483 f1b1457c23861e05f44ccccb49531bed 446 Gene3D G3DSA:1.10.630.10 2 415 4.6E-82 T 12-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_3483 f1b1457c23861e05f44ccccb49531bed 446 SUPERFAMILY SSF48264 17 408 2.23E-66 T 12-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_3483 f1b1457c23861e05f44ccccb49531bed 446 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 349 358 - T 12-10-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 JDM601_3483 f1b1457c23861e05f44ccccb49531bed 446 Pfam PF00067 Cytochrome P450 211 375 1.6E-13 T 12-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_3939 3e46c9daf1c56dc6abce4050d372b310 189 Pfam PF00482 Type II secretion system (T2SS), protein F 45 169 8.5E-14 T 12-10-2018 IPR018076 Type II secretion system F domain JDM601_2697 84cbd45bd120b7a530f0bba2b1e2d16f 168 TIGRFAM TIGR02406 ectoine_EctA: diaminobutyrate acetyltransferase 9 162 2.0E-53 T 12-10-2018 IPR012772 L-2,4-diaminobutyric acid acetyltransferase GO:0019491|GO:0033816 KEGG: 00260+2.3.1.178 JDM601_2697 84cbd45bd120b7a530f0bba2b1e2d16f 168 SUPERFAMILY SSF55729 3 125 1.21E-18 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase JDM601_2697 84cbd45bd120b7a530f0bba2b1e2d16f 168 Gene3D G3DSA:3.40.630.30 7 166 4.5E-44 T 12-10-2018 JDM601_2697 84cbd45bd120b7a530f0bba2b1e2d16f 168 Pfam PF00583 Acetyltransferase (GNAT) family 38 125 1.0E-11 T 12-10-2018 IPR000182 GNAT domain JDM601_3923 84f54986e2cc905a16b99d2fc9f23af8 451 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 149 164 1.5E-15 T 12-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 JDM601_3923 84f54986e2cc905a16b99d2fc9f23af8 451 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 196 211 1.5E-15 T 12-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 JDM601_3923 84f54986e2cc905a16b99d2fc9f23af8 451 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 319 331 1.5E-15 T 12-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 JDM601_3923 84f54986e2cc905a16b99d2fc9f23af8 451 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 300 315 1.5E-15 T 12-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 JDM601_3923 84f54986e2cc905a16b99d2fc9f23af8 451 Pfam PF01433 Peptidase family M1 domain 295 442 6.8E-26 T 12-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 JDM601_3923 84f54986e2cc905a16b99d2fc9f23af8 451 Gene3D G3DSA:1.10.390.60 218 446 1.4E-35 T 12-10-2018 JDM601_3923 84f54986e2cc905a16b99d2fc9f23af8 451 SUPERFAMILY SSF63737 20 212 7.72E-39 T 12-10-2018 JDM601_3923 84f54986e2cc905a16b99d2fc9f23af8 451 SUPERFAMILY SSF55486 224 450 7.47E-52 T 12-10-2018 JDM601_3923 84f54986e2cc905a16b99d2fc9f23af8 451 Gene3D G3DSA:2.60.40.1730 31 212 1.7E-27 T 12-10-2018 JDM601_0693 943b89b0b7c706ec90cfc97f50d60133 179 SUPERFAMILY SSF46689 2 62 2.0E-10 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JDM601_0693 943b89b0b7c706ec90cfc97f50d60133 179 Gene3D G3DSA:1.10.10.60 1 39 2.4E-12 T 12-10-2018 JDM601_0693 943b89b0b7c706ec90cfc97f50d60133 179 Pfam PF13305 WHG domain 76 153 3.0E-13 T 12-10-2018 IPR025996 WHG domain JDM601_0693 943b89b0b7c706ec90cfc97f50d60133 179 Gene3D G3DSA:1.10.357.10 41 175 2.4E-25 T 12-10-2018 JDM601_0693 943b89b0b7c706ec90cfc97f50d60133 179 SUPERFAMILY SSF48498 70 174 8.15E-22 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily JDM601_0693 943b89b0b7c706ec90cfc97f50d60133 179 Pfam PF00440 Bacterial regulatory proteins, tetR family 2 37 3.3E-5 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_2209 da65183d4a8d7f5e33f5031ede90bd4d 419 SUPERFAMILY SSF52777 179 412 3.22E-47 T 12-10-2018 JDM601_2209 da65183d4a8d7f5e33f5031ede90bd4d 419 Gene3D G3DSA:3.30.559.30 179 388 1.5E-124 T 12-10-2018 JDM601_2209 da65183d4a8d7f5e33f5031ede90bd4d 419 Gene3D G3DSA:3.30.559.10 8 372 1.5E-124 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 JDM601_2209 da65183d4a8d7f5e33f5031ede90bd4d 419 Pfam PF00668 Condensation domain 18 240 2.3E-6 T 12-10-2018 IPR001242 Condensation domain JDM601_2209 da65183d4a8d7f5e33f5031ede90bd4d 419 SUPERFAMILY SSF52777 13 148 7.78E-16 T 12-10-2018 JDM601_2209 da65183d4a8d7f5e33f5031ede90bd4d 419 Pfam PF16911 Phthiocerol/phthiodiolone dimycocerosyl transferase C-terminus 296 403 1.4E-28 T 12-10-2018 IPR031641 Phthiocerol/phthiodiolone dimycocerosyl transferase, C-terminal JDM601_0101 3d8d8ee0d5804ba27cfbef2ac0b1aac5 299 Pfam PF12697 Alpha/beta hydrolase family 34 271 2.8E-11 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 JDM601_0101 3d8d8ee0d5804ba27cfbef2ac0b1aac5 299 SUPERFAMILY SSF53474 2 295 1.38E-51 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_0101 3d8d8ee0d5804ba27cfbef2ac0b1aac5 299 Gene3D G3DSA:1.10.10.800 140 223 5.9E-49 T 12-10-2018 JDM601_0101 3d8d8ee0d5804ba27cfbef2ac0b1aac5 299 Gene3D G3DSA:3.40.50.1820 15 274 5.9E-49 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_1806 aa0a765ee44bb1846548ba7dc826a6ba 373 Pfam PF04229 GrpB protein 214 346 1.5E-26 T 12-10-2018 IPR007344 GrpB/Dephospho-CoA kinase JDM601_1806 aa0a765ee44bb1846548ba7dc826a6ba 373 SUPERFAMILY SSF52540 1 194 2.81E-38 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_1806 aa0a765ee44bb1846548ba7dc826a6ba 373 SUPERFAMILY SSF81301 214 347 2.26E-27 T 12-10-2018 JDM601_1806 aa0a765ee44bb1846548ba7dc826a6ba 373 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 4 188 4.8E-42 T 12-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 JDM601_1806 aa0a765ee44bb1846548ba7dc826a6ba 373 Gene3D G3DSA:3.30.460.10 212 350 1.2E-20 T 12-10-2018 JDM601_1806 aa0a765ee44bb1846548ba7dc826a6ba 373 Pfam PF01121 Dephospho-CoA kinase 4 178 3.0E-57 T 12-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 JDM601_1806 aa0a765ee44bb1846548ba7dc826a6ba 373 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 1 196 24.579 T 12-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 JDM601_1806 aa0a765ee44bb1846548ba7dc826a6ba 373 Gene3D G3DSA:3.40.50.300 1 198 1.3E-64 T 12-10-2018 JDM601_0094 3093ebc76c6c620fc3c3c10bfa5ad8c9 311 SUPERFAMILY SSF53335 17 295 1.31E-78 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JDM601_0094 3093ebc76c6c620fc3c3c10bfa5ad8c9 311 Gene3D G3DSA:3.40.50.150 4 311 1.9E-100 T 12-10-2018 JDM601_0094 3093ebc76c6c620fc3c3c10bfa5ad8c9 311 TIGRFAM TIGR00027 mthyl_TIGR00027: methyltransferase, TIGR00027 family 19 289 3.8E-89 T 12-10-2018 IPR011610 S-adenosyl-L-methionine-dependent methyltransferase, putative GO:0008168 JDM601_0094 3093ebc76c6c620fc3c3c10bfa5ad8c9 311 Pfam PF04072 Leucine carboxyl methyltransferase 21 207 4.9E-63 T 12-10-2018 IPR007213 Methyltransferase Ppm1/Ppm2/Tcmp GO:0008168|GO:0032259 JDM601_0792 31636fc2525dcd7894e469638e0328cc 157 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 5 150 1.0E-63 T 12-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 JDM601_0792 31636fc2525dcd7894e469638e0328cc 157 Gene3D G3DSA:3.30.70.640 3 157 9.5E-64 T 12-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 JDM601_0792 31636fc2525dcd7894e469638e0328cc 157 Pfam PF01967 MoaC family 16 149 1.1E-52 T 12-10-2018 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 JDM601_0792 31636fc2525dcd7894e469638e0328cc 157 SUPERFAMILY SSF55040 12 154 1.03E-55 T 12-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 JDM601_0792 31636fc2525dcd7894e469638e0328cc 157 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase [moaC]. 3 157 36.024 T 12-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 JDM601_0073 f67f38904770149cf2b3e807710259d3 349 Pfam PF13810 Domain of unknown function (DUF4185) 20 339 7.9E-65 T 12-10-2018 IPR025442 Domain of unknown function DUF4185 JDM601_0073 f67f38904770149cf2b3e807710259d3 349 SUPERFAMILY SSF110296 138 258 2.7E-5 T 12-10-2018 JDM601_3339 20cdbd3d3047fa7fdaf33fb2a28f2d53 101 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 4.4E-46 T 12-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JDM601_3339 20cdbd3d3047fa7fdaf33fb2a28f2d53 101 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 12-10-2018 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JDM601_3339 20cdbd3d3047fa7fdaf33fb2a28f2d53 101 SUPERFAMILY SSF54999 5 100 1.07E-36 T 12-10-2018 IPR036838 Ribosomal protein S10 domain superfamily JDM601_3339 20cdbd3d3047fa7fdaf33fb2a28f2d53 101 Gene3D G3DSA:3.30.70.600 2 101 5.6E-36 T 12-10-2018 IPR036838 Ribosomal protein S10 domain superfamily JDM601_3339 20cdbd3d3047fa7fdaf33fb2a28f2d53 101 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 3.7E-21 T 12-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JDM601_3339 20cdbd3d3047fa7fdaf33fb2a28f2d53 101 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 3.7E-21 T 12-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JDM601_3339 20cdbd3d3047fa7fdaf33fb2a28f2d53 101 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 3.7E-21 T 12-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JDM601_3339 20cdbd3d3047fa7fdaf33fb2a28f2d53 101 SMART SM01403 7 101 3.0E-55 T 12-10-2018 IPR027486 Ribosomal protein S10 domain JDM601_3339 20cdbd3d3047fa7fdaf33fb2a28f2d53 101 Pfam PF00338 Ribosomal protein S10p/S20e 7 100 1.1E-34 T 12-10-2018 IPR027486 Ribosomal protein S10 domain JDM601_3339 20cdbd3d3047fa7fdaf33fb2a28f2d53 101 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 101 24.494 T 12-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JDM601_1572 b0273ebb6c55aedb7d5ba80c2afd49e8 667 Gene3D G3DSA:3.10.310.50 21 162 7.0E-33 T 12-10-2018 JDM601_1572 b0273ebb6c55aedb7d5ba80c2afd49e8 667 Pfam PF04536 TPM domain 36 154 1.4E-19 T 12-10-2018 IPR007621 TPM domain JDM601_1301 0531b9e426feb4d8e75d0aab94957e74 392 Pfam PF00953 Glycosyl transferase family 4 96 260 2.9E-33 T 12-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 JDM601_2771 f89f1b16995a4810c47fbcd34ea314fc 544 PRINTS PR01165 Cytochrome c oxidase subunit I signature 149 167 2.3E-91 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 JDM601_2771 f89f1b16995a4810c47fbcd34ea314fc 544 PRINTS PR01165 Cytochrome c oxidase subunit I signature 409 430 2.3E-91 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 JDM601_2771 f89f1b16995a4810c47fbcd34ea314fc 544 PRINTS PR01165 Cytochrome c oxidase subunit I signature 74 98 2.3E-91 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 JDM601_2771 f89f1b16995a4810c47fbcd34ea314fc 544 PRINTS PR01165 Cytochrome c oxidase subunit I signature 296 317 2.3E-91 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 JDM601_2771 f89f1b16995a4810c47fbcd34ea314fc 544 PRINTS PR01165 Cytochrome c oxidase subunit I signature 47 70 2.3E-91 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 JDM601_2771 f89f1b16995a4810c47fbcd34ea314fc 544 PRINTS PR01165 Cytochrome c oxidase subunit I signature 274 289 2.3E-91 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 JDM601_2771 f89f1b16995a4810c47fbcd34ea314fc 544 PRINTS PR01165 Cytochrome c oxidase subunit I signature 228 249 2.3E-91 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 JDM601_2771 f89f1b16995a4810c47fbcd34ea314fc 544 PRINTS PR01165 Cytochrome c oxidase subunit I signature 331 349 2.3E-91 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 JDM601_2771 f89f1b16995a4810c47fbcd34ea314fc 544 PRINTS PR01165 Cytochrome c oxidase subunit I signature 178 197 2.3E-91 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 JDM601_2771 f89f1b16995a4810c47fbcd34ea314fc 544 PRINTS PR01165 Cytochrome c oxidase subunit I signature 207 228 2.3E-91 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 JDM601_2771 f89f1b16995a4810c47fbcd34ea314fc 544 PRINTS PR01165 Cytochrome c oxidase subunit I signature 117 129 2.3E-91 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 JDM601_2771 f89f1b16995a4810c47fbcd34ea314fc 544 PRINTS PR01165 Cytochrome c oxidase subunit I signature 359 378 2.3E-91 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 JDM601_2771 f89f1b16995a4810c47fbcd34ea314fc 544 SUPERFAMILY SSF81442 2 508 1.96E-174 T 12-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 JDM601_2771 f89f1b16995a4810c47fbcd34ea314fc 544 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 230 284 - T 12-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 JDM601_2771 f89f1b16995a4810c47fbcd34ea314fc 544 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 10 453 3.4E-150 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 JDM601_2771 f89f1b16995a4810c47fbcd34ea314fc 544 Gene3D G3DSA:1.20.210.10 1 514 2.2E-203 T 12-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 JDM601_2771 f89f1b16995a4810c47fbcd34ea314fc 544 TIGRFAM TIGR02891 CtaD_CoxA: cytochrome c oxidase, subunit I 2 505 2.4E-213 T 12-10-2018 IPR014241 Cytochrome c oxidase, subunit I bacterial type GO:0004129|GO:0005886|GO:0015990|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 JDM601_1578 25dc974922e28601625375a0a3619770 649 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 17 123 2.2E-6 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 JDM601_1578 25dc974922e28601625375a0a3619770 649 Gene3D G3DSA:2.40.110.10 128 266 6.9E-47 T 12-10-2018 JDM601_1578 25dc974922e28601625375a0a3619770 649 Gene3D G3DSA:1.20.140.10 277 451 3.5E-53 T 12-10-2018 JDM601_1578 25dc974922e28601625375a0a3619770 649 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 278 441 1.2E-12 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 JDM601_1578 25dc974922e28601625375a0a3619770 649 SUPERFAMILY SSF47203 273 459 1.14E-48 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 JDM601_1578 25dc974922e28601625375a0a3619770 649 SUPERFAMILY SSF56645 11 255 2.75E-49 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 JDM601_1578 25dc974922e28601625375a0a3619770 649 Gene3D G3DSA:1.10.540.10 11 123 7.0E-5 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 JDM601_1578 25dc974922e28601625375a0a3619770 649 SUPERFAMILY SSF47203 494 631 1.57E-34 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 JDM601_1578 25dc974922e28601625375a0a3619770 649 PIRSF PIRSF000168 2 644 1.5E-180 T 12-10-2018 IPR012258 Acyl-CoA oxidase GO:0003997|GO:0005777|GO:0006631|GO:0071949 KEGG: 00071+1.3.3.6|KEGG: 00592+1.3.3.6|MetaCyc: PWY-5136|MetaCyc: PWY-6837|MetaCyc: PWY-6920|MetaCyc: PWY-7007|MetaCyc: PWY-7288|MetaCyc: PWY-7291|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7574|MetaCyc: PWY-7606|MetaCyc: PWY-7726|MetaCyc: PWY-7854|MetaCyc: PWY-7858|Reactome: R-HSA-9033241 JDM601_1578 25dc974922e28601625375a0a3619770 649 Gene3D G3DSA:1.20.140.10 498 627 5.1E-23 T 12-10-2018 JDM601_1578 25dc974922e28601625375a0a3619770 649 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 129 243 2.6E-17 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 JDM601_1578 25dc974922e28601625375a0a3619770 649 Pfam PF01756 Acyl-CoA oxidase 499 630 5.2E-21 T 12-10-2018 IPR002655 Acyl-CoA oxidase, C-terminal GO:0003997|GO:0005777|GO:0006635 KEGG: 00071+1.3.3.6|KEGG: 00592+1.3.3.6|MetaCyc: PWY-5136|MetaCyc: PWY-6837|MetaCyc: PWY-6920|MetaCyc: PWY-7007|MetaCyc: PWY-7288|MetaCyc: PWY-7291|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7574|MetaCyc: PWY-7606|MetaCyc: PWY-7726|MetaCyc: PWY-7854|MetaCyc: PWY-7858 JDM601_0090 dd966c018dca923b86f7b3921e2d6cc6 129 Gene3D G3DSA:3.10.450.50 8 121 8.1E-17 T 12-10-2018 JDM601_0090 dd966c018dca923b86f7b3921e2d6cc6 129 SUPERFAMILY SSF54427 12 118 2.81E-15 T 12-10-2018 IPR032710 NTF2-like domain superfamily JDM601_0090 dd966c018dca923b86f7b3921e2d6cc6 129 Pfam PF12680 SnoaL-like domain 22 113 3.3E-7 T 12-10-2018 IPR037401 SnoaL-like domain JDM601_3270 022e1b4fbf9463c6ac4356247fe9fa78 98 Gene3D G3DSA:1.10.287.1060 1 97 2.5E-19 T 12-10-2018 JDM601_3270 022e1b4fbf9463c6ac4356247fe9fa78 98 TIGRFAM TIGR03930 WXG100_ESAT6: WXG100 family type VII secretion target 5 93 2.2E-20 T 12-10-2018 IPR010310 Type VII secretion system ESAT-6-like JDM601_3270 022e1b4fbf9463c6ac4356247fe9fa78 98 SUPERFAMILY SSF140453 4 97 4.58E-21 T 12-10-2018 IPR036689 ESAT-6-like superfamily JDM601_3270 022e1b4fbf9463c6ac4356247fe9fa78 98 Pfam PF06013 Proteins of 100 residues with WXG 6 90 3.6E-11 T 12-10-2018 IPR010310 Type VII secretion system ESAT-6-like JDM601_2008 d42eeb6bc8769ae9e2f581dc8da58c3e 194 Pfam PF00440 Bacterial regulatory proteins, tetR family 1 26 1.4E-7 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_2008 d42eeb6bc8769ae9e2f581dc8da58c3e 194 Gene3D G3DSA:1.10.10.60 1 21 7.1E-7 T 12-10-2018 JDM601_2008 d42eeb6bc8769ae9e2f581dc8da58c3e 194 Gene3D G3DSA:1.10.357.10 22 163 1.6E-24 T 12-10-2018 JDM601_2008 d42eeb6bc8769ae9e2f581dc8da58c3e 194 SUPERFAMILY SSF46689 1 38 1.03E-6 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JDM601_2008 d42eeb6bc8769ae9e2f581dc8da58c3e 194 Pfam PF16859 Bacterial transcriptional repressor C-terminal 43 152 3.2E-23 T 12-10-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal JDM601_2008 d42eeb6bc8769ae9e2f581dc8da58c3e 194 SUPERFAMILY SSF48498 46 156 3.42E-17 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily JDM601_0969 9a1bf1fff70686cddad38830654953fc 320 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 18 281 3.9E-53 T 12-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 JDM601_0969 9a1bf1fff70686cddad38830654953fc 320 Pfam PF08544 GHMP kinases C terminal 220 295 4.5E-9 T 12-10-2018 IPR013750 GHMP kinase, C-terminal domain JDM601_0969 9a1bf1fff70686cddad38830654953fc 320 Pfam PF00288 GHMP kinases N terminal domain 103 160 3.5E-7 T 12-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 JDM601_0969 9a1bf1fff70686cddad38830654953fc 320 SUPERFAMILY SSF54211 17 171 1.06E-42 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold JDM601_0969 9a1bf1fff70686cddad38830654953fc 320 Gene3D G3DSA:3.30.230.10 2 175 7.0E-69 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup JDM601_0969 9a1bf1fff70686cddad38830654953fc 320 Hamap MF_00061 Putative 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 18 305 31.274 T 12-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 JDM601_0969 9a1bf1fff70686cddad38830654953fc 320 SUPERFAMILY SSF55060 179 297 3.17E-21 T 12-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily JDM601_0969 9a1bf1fff70686cddad38830654953fc 320 PIRSF PIRSF010376 16 311 2.7E-81 T 12-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 JDM601_0969 9a1bf1fff70686cddad38830654953fc 320 Gene3D G3DSA:3.30.70.890 176 317 2.5E-38 T 12-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily JDM601_4220 d48276703de7a685c9846eb8d31452a4 404 Pfam PF04909 Amidohydrolase 44 361 1.7E-30 T 12-10-2018 IPR006680 Amidohydrolase-related GO:0016787 JDM601_4220 d48276703de7a685c9846eb8d31452a4 404 SUPERFAMILY SSF51556 4 362 2.51E-60 T 12-10-2018 IPR032466 Metal-dependent hydrolase JDM601_4220 d48276703de7a685c9846eb8d31452a4 404 Gene3D G3DSA:3.20.20.140 2 360 3.8E-80 T 12-10-2018 JDM601_0514 2c7d09372766518470347643dcc81533 326 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JDM601_0514 2c7d09372766518470347643dcc81533 326 SUPERFAMILY SSF52540 5 216 5.99E-60 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_0514 2c7d09372766518470347643dcc81533 326 SMART SM00382 33 221 4.9E-15 T 12-10-2018 IPR003593 AAA+ ATPase domain JDM601_0514 2c7d09372766518470347643dcc81533 326 Gene3D G3DSA:3.40.50.300 4 219 8.2E-58 T 12-10-2018 JDM601_0514 2c7d09372766518470347643dcc81533 326 SUPERFAMILY SSF51206 229 316 1.57E-11 T 12-10-2018 IPR018490 Cyclic nucleotide-binding-like JDM601_0514 2c7d09372766518470347643dcc81533 326 Pfam PF00005 ABC transporter 25 173 2.5E-31 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JDM601_0514 2c7d09372766518470347643dcc81533 326 Gene3D G3DSA:2.60.120.10 220 320 2.2E-11 T 12-10-2018 IPR014710 RmlC-like jelly roll fold JDM601_0514 2c7d09372766518470347643dcc81533 326 Pfam PF00027 Cyclic nucleotide-binding domain 230 314 9.5E-10 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain JDM601_1595 8c029ffb1665c8fde88234f0c9cb4246 2489 Pfam PF03704 Bacterial transcriptional activator domain 62 204 9.9E-37 T 12-10-2018 IPR005158 Bacterial transcriptional activator domain JDM601_1595 8c029ffb1665c8fde88234f0c9cb4246 2489 SUPERFAMILY SSF54427 1673 1790 3.38E-7 T 12-10-2018 IPR032710 NTF2-like domain superfamily JDM601_1595 8c029ffb1665c8fde88234f0c9cb4246 2489 SMART SM00044 167 371 1.6E-4 T 12-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 JDM601_1595 8c029ffb1665c8fde88234f0c9cb4246 2489 SUPERFAMILY SSF48452 59 222 3.21E-35 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JDM601_1595 8c029ffb1665c8fde88234f0c9cb4246 2489 Pfam PF13191 AAA ATPase domain 438 609 2.0E-27 T 12-10-2018 JDM601_1595 8c029ffb1665c8fde88234f0c9cb4246 2489 SUPERFAMILY SSF46894 2 48 3.4E-7 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 JDM601_1595 8c029ffb1665c8fde88234f0c9cb4246 2489 Gene3D G3DSA:3.10.450.50 1669 1799 2.8E-7 T 12-10-2018 JDM601_1595 8c029ffb1665c8fde88234f0c9cb4246 2489 SUPERFAMILY SSF54427 1403 1516 2.37E-5 T 12-10-2018 IPR032710 NTF2-like domain superfamily JDM601_1595 8c029ffb1665c8fde88234f0c9cb4246 2489 Gene3D G3DSA:3.10.450.50 1934 2056 4.7E-5 T 12-10-2018 JDM601_1595 8c029ffb1665c8fde88234f0c9cb4246 2489 Gene3D G3DSA:1.25.40.10 69 189 1.3E-6 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JDM601_1595 8c029ffb1665c8fde88234f0c9cb4246 2489 SUPERFAMILY SSF48452 1047 1225 1.24E-6 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JDM601_1595 8c029ffb1665c8fde88234f0c9cb4246 2489 SUPERFAMILY SSF54427 1813 1917 5.17E-6 T 12-10-2018 IPR032710 NTF2-like domain superfamily JDM601_1595 8c029ffb1665c8fde88234f0c9cb4246 2489 Pfam PF00486 Transcriptional regulatory protein, C terminal 3 45 6.3E-5 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 JDM601_1595 8c029ffb1665c8fde88234f0c9cb4246 2489 Gene3D G3DSA:1.25.40.10 1016 1242 1.2E-12 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JDM601_1595 8c029ffb1665c8fde88234f0c9cb4246 2489 SUPERFAMILY SSF54427 1932 2056 4.05E-6 T 12-10-2018 IPR032710 NTF2-like domain superfamily JDM601_1595 8c029ffb1665c8fde88234f0c9cb4246 2489 Gene3D G3DSA:3.30.70.1230 198 393 2.1E-44 T 12-10-2018 IPR029787 Nucleotide cyclase JDM601_1595 8c029ffb1665c8fde88234f0c9cb4246 2489 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 223 358 1.3E-11 T 12-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 JDM601_1595 8c029ffb1665c8fde88234f0c9cb4246 2489 SUPERFAMILY SSF55073 221 391 1.32E-42 T 12-10-2018 IPR029787 Nucleotide cyclase JDM601_1595 8c029ffb1665c8fde88234f0c9cb4246 2489 SMART SM00028 1116 1149 130.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JDM601_1595 8c029ffb1665c8fde88234f0c9cb4246 2489 SMART SM00028 67 100 150.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JDM601_1595 8c029ffb1665c8fde88234f0c9cb4246 2489 SMART SM00028 1194 1227 150.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JDM601_1595 8c029ffb1665c8fde88234f0c9cb4246 2489 SMART SM00028 1154 1187 270.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JDM601_1595 8c029ffb1665c8fde88234f0c9cb4246 2489 SMART SM00028 954 987 150.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JDM601_1595 8c029ffb1665c8fde88234f0c9cb4246 2489 SMART SM00028 155 188 160.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 JDM601_1595 8c029ffb1665c8fde88234f0c9cb4246 2489 SMART SM01043 62 205 3.8E-46 T 12-10-2018 IPR005158 Bacterial transcriptional activator domain JDM601_1595 8c029ffb1665c8fde88234f0c9cb4246 2489 SUPERFAMILY SSF52540 430 688 1.73E-13 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_1595 8c029ffb1665c8fde88234f0c9cb4246 2489 Gene3D G3DSA:1.10.10.10 1 68 1.5E-11 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JDM601_0421 c775410be93d36192ea4febcc571160f 208 TIGRFAM TIGR00164 PS_decarb_rel: phosphatidylserine decarboxylase homolog 37 206 1.8E-47 T 12-10-2018 IPR033175 Phosphatidylserine decarboxylase, archaeal-type KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669 JDM601_0421 c775410be93d36192ea4febcc571160f 208 Hamap MF_00664 Phosphatidylserine decarboxylase proenzyme [psd]. 1 208 33.246 T 12-10-2018 IPR033175 Phosphatidylserine decarboxylase, archaeal-type KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669 JDM601_0421 c775410be93d36192ea4febcc571160f 208 Pfam PF02666 Phosphatidylserine decarboxylase 39 204 7.1E-29 T 12-10-2018 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 JDM601_2505 d4cf323b64466f60c7dfae9524d8b542 234 Pfam PF14032 PknH-like extracellular domain 48 230 1.6E-49 T 12-10-2018 IPR026954 PknH-like extracellular domain KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1 JDM601_2505 d4cf323b64466f60c7dfae9524d8b542 234 Gene3D G3DSA:3.40.1000.70 43 233 6.2E-58 T 12-10-2018 IPR038232 PknH-like extracellular domain superfamily KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1 JDM601_3484 8f473b35c709a5891cc9c66d1597b639 391 SUPERFAMILY SSF56645 3 248 1.31E-69 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 JDM601_3484 8f473b35c709a5891cc9c66d1597b639 391 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 129 141 - T 12-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 JDM601_3484 8f473b35c709a5891cc9c66d1597b639 391 Gene3D G3DSA:2.40.110.10 126 238 1.8E-38 T 12-10-2018 JDM601_3484 8f473b35c709a5891cc9c66d1597b639 391 SUPERFAMILY SSF47203 235 390 2.97E-16 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 JDM601_3484 8f473b35c709a5891cc9c66d1597b639 391 Gene3D G3DSA:1.10.540.10 2 121 1.7E-22 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 JDM601_3484 8f473b35c709a5891cc9c66d1597b639 391 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 127 223 2.7E-24 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 JDM601_3484 8f473b35c709a5891cc9c66d1597b639 391 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 7 123 1.9E-15 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 JDM601_3484 8f473b35c709a5891cc9c66d1597b639 391 Gene3D G3DSA:1.20.140.10 239 391 3.4E-23 T 12-10-2018 JDM601_3484 8f473b35c709a5891cc9c66d1597b639 391 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 235 386 4.0E-15 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 JDM601_0485 af6616015144232d9ff631e5b4e945c0 450 SUPERFAMILY SSF75304 2 432 2.09E-109 T 12-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 JDM601_0485 af6616015144232d9ff631e5b4e945c0 450 ProSitePatterns PS00571 Amidases signature. 125 156 - T 12-10-2018 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921|Reactome: R-HSA-2142753 JDM601_0485 af6616015144232d9ff631e5b4e945c0 450 Gene3D G3DSA:3.90.1300.10 1 448 3.5E-124 T 12-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 JDM601_0485 af6616015144232d9ff631e5b4e945c0 450 Pfam PF01425 Amidase 2 422 3.2E-98 T 12-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 JDM601_2766 bcb2643ebc4aa59d7be347e18fce3af0 221 SUPERFAMILY SSF52096 9 215 5.76E-56 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily JDM601_2766 bcb2643ebc4aa59d7be347e18fce3af0 221 Pfam PF00378 Enoyl-CoA hydratase/isomerase 15 215 3.9E-46 T 12-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 JDM601_2766 bcb2643ebc4aa59d7be347e18fce3af0 221 Gene3D G3DSA:3.90.226.10 2 202 2.4E-63 T 12-10-2018 JDM601_3736 268f600c67d551b5e56fbe39da156e06 302 Gene3D G3DSA:3.20.20.70 3 296 5.8E-32 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JDM601_3736 268f600c67d551b5e56fbe39da156e06 302 Pfam PF05853 beta-keto acid cleavage enzyme 8 295 5.0E-63 T 12-10-2018 IPR008567 3-keto-5-aminohexanoate cleavage enzyme GO:0016740|GO:0019475 KEGG: 00310+2.3.1.247 JDM601_2695 41c787682fe4d68b7610c69f13181f87 265 Gene3D G3DSA:2.30.30.370 1 60 7.1E-31 T 12-10-2018 JDM601_2695 41c787682fe4d68b7610c69f13181f87 265 Gene3D G3DSA:3.90.850.10 61 264 3.4E-85 T 12-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 JDM601_2695 41c787682fe4d68b7610c69f13181f87 265 SUPERFAMILY SSF56529 64 260 9.42E-77 T 12-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 JDM601_2695 41c787682fe4d68b7610c69f13181f87 265 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 65 259 7.6E-67 T 12-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 JDM601_2695 41c787682fe4d68b7610c69f13181f87 265 Pfam PF10370 Domain of unknown function (DUF2437) 1 60 7.5E-15 T 12-10-2018 IPR018833 Domain of unknown function DUF2437 JDM601_3448 513d57f3ae89d3ba3ff4141ea51e58fb 204 SUPERFAMILY SSF46689 1 72 4.93E-11 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JDM601_3448 513d57f3ae89d3ba3ff4141ea51e58fb 204 Gene3D G3DSA:1.10.357.10 8 198 2.0E-34 T 12-10-2018 JDM601_3448 513d57f3ae89d3ba3ff4141ea51e58fb 204 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 60 6.9E-6 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_1235 2ccd162bd34a7640c79c54d87f31b2b1 325 SUPERFAMILY SSF55469 233 322 2.22E-7 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 JDM601_1235 2ccd162bd34a7640c79c54d87f31b2b1 325 Gene3D G3DSA:3.40.109.10 1 102 7.8E-37 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 JDM601_1235 2ccd162bd34a7640c79c54d87f31b2b1 325 Gene3D G3DSA:3.40.109.10 105 325 6.8E-51 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 JDM601_1235 2ccd162bd34a7640c79c54d87f31b2b1 325 SUPERFAMILY SSF55469 3 87 1.7E-10 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 JDM601_1392 301a285f3cf45e7afdde2c4963c0ec63 390 Pfam PF03734 L,D-transpeptidase catalytic domain 236 356 1.1E-18 T 12-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 JDM601_1392 301a285f3cf45e7afdde2c4963c0ec63 390 Gene3D G3DSA:2.60.40.3710 137 383 1.9E-102 T 12-10-2018 JDM601_1392 301a285f3cf45e7afdde2c4963c0ec63 390 Gene3D G3DSA:2.40.440.10 230 371 1.9E-102 T 12-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like JDM601_1392 301a285f3cf45e7afdde2c4963c0ec63 390 SUPERFAMILY SSF141523 230 356 3.92E-30 T 12-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like JDM601_1392 301a285f3cf45e7afdde2c4963c0ec63 390 Gene3D G3DSA:2.60.40.3780 32 129 2.5E-32 T 12-10-2018 JDM601_2777 fa3695f68c4123bebe7e339e16f09d5e 350 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 144 1.5E-27 T 12-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 JDM601_2777 fa3695f68c4123bebe7e339e16f09d5e 350 Gene3D G3DSA:3.90.180.10 14 342 6.2E-134 T 12-10-2018 JDM601_2777 fa3695f68c4123bebe7e339e16f09d5e 350 SMART SM00829 11 342 6.6E-7 T 12-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 JDM601_2777 fa3695f68c4123bebe7e339e16f09d5e 350 SUPERFAMILY SSF51735 150 312 1.24E-40 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_2777 fa3695f68c4123bebe7e339e16f09d5e 350 Gene3D G3DSA:3.40.50.720 160 314 6.2E-134 T 12-10-2018 JDM601_2777 fa3695f68c4123bebe7e339e16f09d5e 350 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 62 76 - T 12-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 JDM601_2777 fa3695f68c4123bebe7e339e16f09d5e 350 Pfam PF00107 Zinc-binding dehydrogenase 186 308 2.0E-18 T 12-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 JDM601_2777 fa3695f68c4123bebe7e339e16f09d5e 350 SUPERFAMILY SSF50129 6 173 7.91E-52 T 12-10-2018 IPR011032 GroES-like superfamily JDM601_0699 10ef361a2cfe9db01fefc2a8c9d41b21 274 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 172 191 2.6E-9 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0699 10ef361a2cfe9db01fefc2a8c9d41b21 274 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 160 2.6E-9 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0699 10ef361a2cfe9db01fefc2a8c9d41b21 274 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 98 109 2.6E-9 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0699 10ef361a2cfe9db01fefc2a8c9d41b21 274 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 270 1.3E-50 T 12-10-2018 JDM601_0699 10ef361a2cfe9db01fefc2a8c9d41b21 274 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 98 109 2.3E-32 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0699 10ef361a2cfe9db01fefc2a8c9d41b21 274 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 2.3E-32 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0699 10ef361a2cfe9db01fefc2a8c9d41b21 274 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 191 2.3E-32 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0699 10ef361a2cfe9db01fefc2a8c9d41b21 274 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 235 255 2.3E-32 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0699 10ef361a2cfe9db01fefc2a8c9d41b21 274 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 146 162 2.3E-32 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0699 10ef361a2cfe9db01fefc2a8c9d41b21 274 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 193 210 2.3E-32 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0699 10ef361a2cfe9db01fefc2a8c9d41b21 274 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 159 187 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 JDM601_0699 10ef361a2cfe9db01fefc2a8c9d41b21 274 Gene3D G3DSA:3.40.50.720 1 274 3.7E-90 T 12-10-2018 JDM601_0699 10ef361a2cfe9db01fefc2a8c9d41b21 274 SUPERFAMILY SSF51735 6 273 6.15E-72 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_0699 10ef361a2cfe9db01fefc2a8c9d41b21 274 TIGRFAM TIGR03971 SDR_subfam_1: SDR family mycofactocin-dependent oxidoreductase 7 272 2.9E-111 T 12-10-2018 IPR023985 Mycofactocin-dependent oxidoreductase JDM601_0699 10ef361a2cfe9db01fefc2a8c9d41b21 274 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 10 206 0.0011 T 12-10-2018 JDM601_0452 1a2f6575065a0b89ae0a32ee0623231d 280 SUPERFAMILY SSF53335 4 277 3.58E-72 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JDM601_0452 1a2f6575065a0b89ae0a32ee0623231d 280 Gene3D G3DSA:3.40.50.150 1 280 9.0E-97 T 12-10-2018 JDM601_0452 1a2f6575065a0b89ae0a32ee0623231d 280 PIRSF PIRSF003085 1 280 4.8E-104 T 12-10-2018 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 JDM601_0452 1a2f6575065a0b89ae0a32ee0623231d 280 Pfam PF02353 Mycolic acid cyclopropane synthetase 1 273 1.0E-112 T 12-10-2018 JDM601_0248 9afe8da116342d322a91b68ff6297e81 297 Gene3D G3DSA:2.40.100.10 173 291 1.7E-43 T 12-10-2018 IPR029000 Cyclophilin-like domain superfamily JDM601_0248 9afe8da116342d322a91b68ff6297e81 297 Pfam PF02626 Carboxyltransferase domain, subdomain A and B 26 283 5.7E-75 T 12-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B JDM601_0248 9afe8da116342d322a91b68ff6297e81 297 TIGRFAM TIGR00724 urea_amlyse_rel: biotin-dependent carboxylase uncharacterized domain 3 289 9.6E-106 T 12-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B JDM601_0248 9afe8da116342d322a91b68ff6297e81 297 SUPERFAMILY SSF50891 175 281 3.16E-9 T 12-10-2018 IPR029000 Cyclophilin-like domain superfamily JDM601_0248 9afe8da116342d322a91b68ff6297e81 297 SMART SM00797 25 297 1.0E-96 T 12-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B JDM601_3711 ebf6617cb6d2aebfcb3e932031dfd593 199 Pfam PF00440 Bacterial regulatory proteins, tetR family 17 63 2.3E-10 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_3711 ebf6617cb6d2aebfcb3e932031dfd593 199 Gene3D G3DSA:1.10.357.10 2 199 1.0E-51 T 12-10-2018 JDM601_3711 ebf6617cb6d2aebfcb3e932031dfd593 199 SUPERFAMILY SSF48498 89 197 6.67E-18 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily JDM601_3711 ebf6617cb6d2aebfcb3e932031dfd593 199 SUPERFAMILY SSF46689 6 77 1.05E-14 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JDM601_3711 ebf6617cb6d2aebfcb3e932031dfd593 199 Pfam PF13305 WHG domain 94 174 1.1E-15 T 12-10-2018 IPR025996 WHG domain JDM601_1225 5b8649a4965435d8fa12d370368c2c50 103 Pfam PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system 11 84 1.1E-9 T 12-10-2018 IPR003477 mRNA interferase PemK-like GO:0003677 JDM601_1225 5b8649a4965435d8fa12d370368c2c50 103 SUPERFAMILY SSF50118 10 98 2.18E-16 T 12-10-2018 JDM601_1225 5b8649a4965435d8fa12d370368c2c50 103 Gene3D G3DSA:2.30.30.110 1 103 1.0E-24 T 12-10-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor JDM601_3549 bc8b015d6f34a5bcd4b6699c2bf6b521 359 Pfam PF01571 Aminomethyltransferase folate-binding domain 20 232 9.7E-22 T 12-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain JDM601_3549 bc8b015d6f34a5bcd4b6699c2bf6b521 359 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 246 318 2.0E-5 T 12-10-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 JDM601_3549 bc8b015d6f34a5bcd4b6699c2bf6b521 359 SUPERFAMILY SSF103025 17 262 6.28E-54 T 12-10-2018 JDM601_3549 bc8b015d6f34a5bcd4b6699c2bf6b521 359 PIRSF PIRSF006487 13 338 4.0E-13 T 12-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 JDM601_3549 bc8b015d6f34a5bcd4b6699c2bf6b521 359 TIGRFAM TIGR03317 ygfZ_signature: folate-binding protein YgfZ 204 272 3.6E-19 T 12-10-2018 IPR017703 YgfZ/GcvT conserved site JDM601_3549 bc8b015d6f34a5bcd4b6699c2bf6b521 359 Gene3D G3DSA:3.30.1360.120 15 340 9.7E-57 T 12-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 JDM601_1126 499fccc547a8e4e2b6153ec126b470ba 318 SUPERFAMILY SSF56529 54 310 3.27E-55 T 12-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 JDM601_1126 499fccc547a8e4e2b6153ec126b470ba 318 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 67 309 1.1E-50 T 12-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 JDM601_4234 92b4bd1d7e08285ea56caf4861b2238b 95 SUPERFAMILY SSF140459 5 81 6.02E-24 T 12-10-2018 JDM601_4234 92b4bd1d7e08285ea56caf4861b2238b 95 Gene3D G3DSA:1.10.287.850 1 95 1.3E-29 T 12-10-2018 JDM601_4234 92b4bd1d7e08285ea56caf4861b2238b 95 Pfam PF00934 PE family 1 90 1.6E-29 T 12-10-2018 IPR000084 PE-PGRS family, N-terminal JDM601_1066 2d9f700b04e3b693011f95b9f79e9745 294 SUPERFAMILY SSF53850 89 293 1.05E-36 T 12-10-2018 JDM601_1066 2d9f700b04e3b693011f95b9f79e9745 294 SUPERFAMILY SSF46785 1 85 6.44E-23 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JDM601_1066 2d9f700b04e3b693011f95b9f79e9745 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 1.0E-21 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JDM601_1066 2d9f700b04e3b693011f95b9f79e9745 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.4E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JDM601_1066 2d9f700b04e3b693011f95b9f79e9745 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.4E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JDM601_1066 2d9f700b04e3b693011f95b9f79e9745 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.4E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JDM601_1066 2d9f700b04e3b693011f95b9f79e9745 294 Gene3D G3DSA:3.40.190.290 90 293 1.7E-43 T 12-10-2018 JDM601_1066 2d9f700b04e3b693011f95b9f79e9745 294 Gene3D G3DSA:1.10.10.10 1 84 3.7E-27 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JDM601_1066 2d9f700b04e3b693011f95b9f79e9745 294 Pfam PF03466 LysR substrate binding domain 87 291 1.2E-39 T 12-10-2018 IPR005119 LysR, substrate-binding JDM601_1250 eece0e3a52e4f45c52f9873112d08cbf 595 Gene3D G3DSA:3.30.300.30 457 584 2.3E-38 T 12-10-2018 JDM601_1250 eece0e3a52e4f45c52f9873112d08cbf 595 SUPERFAMILY SSF56801 9 568 6.41E-103 T 12-10-2018 JDM601_1250 eece0e3a52e4f45c52f9873112d08cbf 595 Pfam PF00501 AMP-binding enzyme 17 462 3.0E-83 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 JDM601_1250 eece0e3a52e4f45c52f9873112d08cbf 595 Gene3D G3DSA:3.40.50.12780 2 456 1.5E-150 T 12-10-2018 JDM601_0364 002661c68fd44adbc0b338765b4a5dea 212 Gene3D G3DSA:1.20.58.350 35 80 7.6E-37 T 12-10-2018 JDM601_0364 002661c68fd44adbc0b338765b4a5dea 212 SUPERFAMILY SSF54637 16 205 3.89E-44 T 12-10-2018 IPR029069 HotDog domain superfamily JDM601_0364 002661c68fd44adbc0b338765b4a5dea 212 Pfam PF03061 Thioesterase superfamily 124 197 3.6E-7 T 12-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 JDM601_0364 002661c68fd44adbc0b338765b4a5dea 212 Gene3D G3DSA:3.10.129.10 81 204 7.6E-37 T 12-10-2018 JDM601_0706 444f58b1083ad09485a109ce74ae90b7 293 SMART SM00829 1 291 2.2E-21 T 12-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 JDM601_0706 444f58b1083ad09485a109ce74ae90b7 293 Pfam PF00107 Zinc-binding dehydrogenase 121 235 4.8E-27 T 12-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 JDM601_0706 444f58b1083ad09485a109ce74ae90b7 293 SUPERFAMILY SSF50129 2 108 2.44E-30 T 12-10-2018 IPR011032 GroES-like superfamily JDM601_0706 444f58b1083ad09485a109ce74ae90b7 293 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 2 58 1.0E-6 T 12-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 JDM601_0706 444f58b1083ad09485a109ce74ae90b7 293 SUPERFAMILY SSF51735 82 259 2.28E-45 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_0706 444f58b1083ad09485a109ce74ae90b7 293 Gene3D G3DSA:3.90.180.10 2 287 1.7E-87 T 12-10-2018 JDM601_0706 444f58b1083ad09485a109ce74ae90b7 293 Gene3D G3DSA:3.40.50.720 93 236 1.7E-87 T 12-10-2018 JDM601_0249 0d946c443a503ff5699fc5835fb8160b 219 Pfam PF02682 Carboxyltransferase domain, subdomain C and D 16 208 1.1E-57 T 12-10-2018 IPR003833 Carboxyltransferase domain, subdomain C and D JDM601_0249 0d946c443a503ff5699fc5835fb8160b 219 Gene3D G3DSA:2.40.100.10 90 219 1.3E-51 T 12-10-2018 IPR029000 Cyclophilin-like domain superfamily JDM601_0249 0d946c443a503ff5699fc5835fb8160b 219 SUPERFAMILY SSF50891 97 219 6.83E-37 T 12-10-2018 IPR029000 Cyclophilin-like domain superfamily JDM601_0249 0d946c443a503ff5699fc5835fb8160b 219 Gene3D G3DSA:3.30.1360.40 11 89 1.1E-22 T 12-10-2018 JDM601_0249 0d946c443a503ff5699fc5835fb8160b 219 SMART SM00796 14 208 1.7E-69 T 12-10-2018 IPR003833 Carboxyltransferase domain, subdomain C and D JDM601_0249 0d946c443a503ff5699fc5835fb8160b 219 SUPERFAMILY SSF160467 16 65 7.72E-7 T 12-10-2018 JDM601_1252 e9027e70f9b7391e47c37e1dce9d53ea 167 Gene3D G3DSA:1.10.357.10 2 167 1.4E-24 T 12-10-2018 JDM601_1252 e9027e70f9b7391e47c37e1dce9d53ea 167 Pfam PF00440 Bacterial regulatory proteins, tetR family 7 52 7.0E-14 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_1252 e9027e70f9b7391e47c37e1dce9d53ea 167 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 7 20 1.9E-7 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_1252 e9027e70f9b7391e47c37e1dce9d53ea 167 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 28 51 1.9E-7 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_1252 e9027e70f9b7391e47c37e1dce9d53ea 167 SUPERFAMILY SSF46689 3 69 8.21E-16 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JDM601_0642 a77c7fba578ed966174a775526ba8c97 584 SUPERFAMILY SSF52540 157 562 8.99E-55 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_0642 a77c7fba578ed966174a775526ba8c97 584 Gene3D G3DSA:3.40.50.300 350 449 4.2E-12 T 12-10-2018 JDM601_0642 a77c7fba578ed966174a775526ba8c97 584 Gene3D G3DSA:3.40.50.300 450 570 5.4E-26 T 12-10-2018 JDM601_0642 a77c7fba578ed966174a775526ba8c97 584 TIGRFAM TIGR01447 recD: exodeoxyribonuclease V, alpha subunit 20 581 3.0E-161 T 12-10-2018 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 JDM601_0642 a77c7fba578ed966174a775526ba8c97 584 Pfam PF13538 UvrD-like helicase C-terminal domain 510 557 1.3E-15 T 12-10-2018 IPR027785 UvrD-like helicase C-terminal domain JDM601_0642 a77c7fba578ed966174a775526ba8c97 584 Hamap MF_01487 RecBCD enzyme subunit RecD [recD]. 29 579 43.462 T 12-10-2018 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 JDM601_0642 a77c7fba578ed966174a775526ba8c97 584 Pfam PF13604 AAA domain 158 368 3.1E-38 T 12-10-2018 JDM601_0642 a77c7fba578ed966174a775526ba8c97 584 SMART SM00382 169 367 6.0E-4 T 12-10-2018 IPR003593 AAA+ ATPase domain JDM601_0642 a77c7fba578ed966174a775526ba8c97 584 Gene3D G3DSA:3.40.50.300 121 349 2.4E-57 T 12-10-2018 JDM601_1726 a080c8dc9fbf64cafe9bb1ba91b1e36c 393 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 142 154 - T 12-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 JDM601_1726 a080c8dc9fbf64cafe9bb1ba91b1e36c 393 SUPERFAMILY SSF56112 16 305 1.13E-68 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily JDM601_1726 a080c8dc9fbf64cafe9bb1ba91b1e36c 393 Gene3D G3DSA:1.10.510.10 104 287 2.8E-47 T 12-10-2018 JDM601_1726 a080c8dc9fbf64cafe9bb1ba91b1e36c 393 SMART SM00220 19 280 1.5E-49 T 12-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 JDM601_1726 a080c8dc9fbf64cafe9bb1ba91b1e36c 393 PIRSF PIRSF000654 33 270 4.6E-19 T 12-10-2018 JDM601_1726 a080c8dc9fbf64cafe9bb1ba91b1e36c 393 Pfam PF00069 Protein kinase domain 19 269 7.1E-43 T 12-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 JDM601_1726 a080c8dc9fbf64cafe9bb1ba91b1e36c 393 Gene3D G3DSA:3.30.200.20 8 102 8.2E-24 T 12-10-2018 JDM601_3808 a6499c9800333401cda39471aa74dd1b 211 Pfam PF13419 Haloacid dehalogenase-like hydrolase 104 194 5.7E-8 T 12-10-2018 JDM601_3808 a6499c9800333401cda39471aa74dd1b 211 Gene3D G3DSA:3.40.50.1000 11 206 1.9E-43 T 12-10-2018 IPR023214 HAD superfamily JDM601_3808 a6499c9800333401cda39471aa74dd1b 211 SUPERFAMILY SSF56784 9 204 7.78E-28 T 12-10-2018 IPR036412 HAD-like superfamily JDM601_3808 a6499c9800333401cda39471aa74dd1b 211 Gene3D G3DSA:1.10.150.240 22 97 1.9E-43 T 12-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 JDM601_3808 a6499c9800333401cda39471aa74dd1b 211 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 185 198 5.6E-7 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 JDM601_3808 a6499c9800333401cda39471aa74dd1b 211 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 112 125 5.6E-7 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 JDM601_3808 a6499c9800333401cda39471aa74dd1b 211 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 158 178 5.6E-7 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 JDM601_3808 a6499c9800333401cda39471aa74dd1b 211 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 97 195 9.0E-15 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 JDM601_1442 239bddba995c616228472ddadf30fec5 203 SUPERFAMILY SSF52833 6 163 8.95E-26 T 12-10-2018 IPR036249 Thioredoxin-like superfamily JDM601_1442 239bddba995c616228472ddadf30fec5 203 Gene3D G3DSA:3.40.30.10 1 203 1.2E-80 T 12-10-2018 JDM601_1442 239bddba995c616228472ddadf30fec5 203 Pfam PF01323 DSBA-like thioredoxin domain 8 161 3.4E-11 T 12-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 JDM601_2558 d55e0d22b997152d3a0dd6c0bae2eb65 181 Pfam PF08819 Domain of unknown function (DUF1802) 3 172 5.4E-59 T 12-10-2018 IPR014923 Protein of unknown function DUF1802 JDM601_2558 d55e0d22b997152d3a0dd6c0bae2eb65 181 PIRSF PIRSF018957 1 181 1.1E-76 T 12-10-2018 IPR008307 Uncharacterised conserved protein UCP018957 JDM601_0147 c2fce2361e4911a722b3ad82d4315372 635 Pfam PF06259 Alpha/beta hydrolase 360 543 4.7E-46 T 12-10-2018 IPR010427 Protein of unknown function DUF1023 JDM601_0147 c2fce2361e4911a722b3ad82d4315372 635 SUPERFAMILY SSF53474 425 517 3.77E-5 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_0506 e5c67847534056298120abd37b4e9647 549 Gene3D G3DSA:3.40.50.10090 287 516 1.9E-49 T 12-10-2018 JDM601_0506 e5c67847534056298120abd37b4e9647 549 SUPERFAMILY SSF69618 279 530 2.62E-69 T 12-10-2018 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 JDM601_0506 e5c67847534056298120abd37b4e9647 549 Gene3D G3DSA:3.40.50.10090 311 451 1.9E-49 T 12-10-2018 JDM601_0506 e5c67847534056298120abd37b4e9647 549 Pfam PF02602 Uroporphyrinogen-III synthase HemD 293 523 6.7E-65 T 12-10-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 JDM601_0506 e5c67847534056298120abd37b4e9647 549 SUPERFAMILY SSF53790 2 282 2.22E-39 T 12-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 JDM601_0506 e5c67847534056298120abd37b4e9647 549 Gene3D G3DSA:3.40.1010.10 1 142 3.2E-21 T 12-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 JDM601_0506 e5c67847534056298120abd37b4e9647 549 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 1 230 2.2E-39 T 12-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 JDM601_0506 e5c67847534056298120abd37b4e9647 549 Gene3D G3DSA:3.30.950.10 144 286 2.6E-18 T 12-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 JDM601_4126 b80e6fb068fedd570b5ed6a01db2ab9c 633 Pfam PF13641 Glycosyltransferase like family 2 167 422 8.0E-50 T 12-10-2018 JDM601_4126 b80e6fb068fedd570b5ed6a01db2ab9c 633 Gene3D G3DSA:3.90.550.60 6 405 2.6E-157 T 12-10-2018 JDM601_4126 b80e6fb068fedd570b5ed6a01db2ab9c 633 SUPERFAMILY SSF53448 167 426 3.0E-28 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases JDM601_1744 d896a2f46f35c7dd3cb4aa0b328889d0 494 Pfam PF08245 Mur ligase middle domain 120 311 4.9E-27 T 12-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 JDM601_1744 d896a2f46f35c7dd3cb4aa0b328889d0 494 Gene3D G3DSA:3.40.1190.10 104 328 1.4E-65 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 JDM601_1744 d896a2f46f35c7dd3cb4aa0b328889d0 494 Gene3D G3DSA:3.90.190.20 329 486 3.6E-49 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 JDM601_1744 d896a2f46f35c7dd3cb4aa0b328889d0 494 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 13 475 3.1E-149 T 12-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 JDM601_1744 d896a2f46f35c7dd3cb4aa0b328889d0 494 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 10 481 38.171 T 12-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 JDM601_1744 d896a2f46f35c7dd3cb4aa0b328889d0 494 Pfam PF02875 Mur ligase family, glutamate ligase domain 331 420 3.4E-21 T 12-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 JDM601_1744 d896a2f46f35c7dd3cb4aa0b328889d0 494 SUPERFAMILY SSF51984 12 102 7.98E-21 T 12-10-2018 JDM601_1744 d896a2f46f35c7dd3cb4aa0b328889d0 494 Gene3D G3DSA:3.40.50.720 11 103 1.6E-28 T 12-10-2018 JDM601_1744 d896a2f46f35c7dd3cb4aa0b328889d0 494 Pfam PF01225 Mur ligase family, catalytic domain 13 115 7.3E-23 T 12-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 JDM601_1744 d896a2f46f35c7dd3cb4aa0b328889d0 494 SUPERFAMILY SSF53623 102 329 4.12E-53 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 JDM601_1744 d896a2f46f35c7dd3cb4aa0b328889d0 494 SUPERFAMILY SSF53244 330 477 2.93E-41 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 JDM601_2402 0641235c71f3066be188f3c0203b2206 237 Pfam PF12840 Helix-turn-helix domain 13 62 9.5E-7 T 12-10-2018 JDM601_2402 0641235c71f3066be188f3c0203b2206 237 SUPERFAMILY SSF46785 12 205 1.19E-12 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JDM601_2402 0641235c71f3066be188f3c0203b2206 237 Gene3D G3DSA:1.10.10.10 9 94 1.2E-6 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JDM601_0221 daa213cfe9fcad42b68746c8fa4ed8dd 197 Gene3D G3DSA:1.10.357.10 1 186 4.0E-65 T 12-10-2018 JDM601_0221 daa213cfe9fcad42b68746c8fa4ed8dd 197 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 6 19 3.5E-8 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_0221 daa213cfe9fcad42b68746c8fa4ed8dd 197 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 27 50 3.5E-8 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_0221 daa213cfe9fcad42b68746c8fa4ed8dd 197 Pfam PF00440 Bacterial regulatory proteins, tetR family 7 52 1.5E-15 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_0221 daa213cfe9fcad42b68746c8fa4ed8dd 197 SUPERFAMILY SSF46689 2 76 1.9E-18 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JDM601_0221 daa213cfe9fcad42b68746c8fa4ed8dd 197 SUPERFAMILY SSF48498 73 182 8.38E-11 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily JDM601_2461 e1794969759829636664c1718b14955b 224 Pfam PF12840 Helix-turn-helix domain 16 68 9.6E-8 T 12-10-2018 JDM601_2461 e1794969759829636664c1718b14955b 224 Gene3D G3DSA:1.10.10.10 14 107 1.8E-6 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JDM601_2461 e1794969759829636664c1718b14955b 224 SUPERFAMILY SSF46785 12 194 4.72E-12 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JDM601_3168 3200a1c20f249191de3400efb76a16b9 204 TIGRFAM TIGR00708 cobA: cob(I)yrinic acid a,c-diamide adenosyltransferase 19 204 7.4E-72 T 12-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 JDM601_3168 3200a1c20f249191de3400efb76a16b9 204 Gene3D G3DSA:3.40.50.300 6 204 5.5E-60 T 12-10-2018 JDM601_3168 3200a1c20f249191de3400efb76a16b9 204 PIRSF PIRSF015617 1 204 1.9E-62 T 12-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 JDM601_3168 3200a1c20f249191de3400efb76a16b9 204 Pfam PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP 22 204 1.0E-57 T 12-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 JDM601_3168 3200a1c20f249191de3400efb76a16b9 204 SUPERFAMILY SSF52540 12 204 2.34E-59 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_2218 3739a72c60fcd52e7499dd17fb1e40a4 236 SUPERFAMILY SSF53474 4 220 5.31E-38 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_2218 3739a72c60fcd52e7499dd17fb1e40a4 236 Gene3D G3DSA:3.40.50.1820 2 224 1.5E-49 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_2218 3739a72c60fcd52e7499dd17fb1e40a4 236 Pfam PF00975 Thioesterase domain 7 229 6.1E-43 T 12-10-2018 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 JDM601_3752 b08246d32bbf572d0306e94e0d772ca8 406 Pfam PF02515 CoA-transferase family III 5 382 1.4E-94 T 12-10-2018 IPR003673 CoA-transferase family III GO:0003824 JDM601_3752 b08246d32bbf572d0306e94e0d772ca8 406 SUPERFAMILY SSF89796 3 405 3.53E-101 T 12-10-2018 IPR023606 CoA-transferase family III domain superfamily JDM601_3752 b08246d32bbf572d0306e94e0d772ca8 406 Gene3D G3DSA:3.40.50.10540 5 398 1.1E-97 T 12-10-2018 IPR023606 CoA-transferase family III domain superfamily JDM601_3752 b08246d32bbf572d0306e94e0d772ca8 406 Gene3D G3DSA:3.30.1540.10 241 334 1.1E-97 T 12-10-2018 JDM601_3727 01506f6842242b884e4d4f13bcd8a973 872 SUPERFAMILY SSF52009 772 870 1.28E-26 T 12-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 JDM601_3727 01506f6842242b884e4d4f13bcd8a973 872 Pfam PF00391 PEP-utilising enzyme, mobile domain 795 866 5.1E-23 T 12-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 JDM601_3727 01506f6842242b884e4d4f13bcd8a973 872 Gene3D G3DSA:3.50.30.10 770 871 2.1E-31 T 12-10-2018 JDM601_3727 01506f6842242b884e4d4f13bcd8a973 872 SUPERFAMILY SSF51735 3 304 2.91E-48 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_3727 01506f6842242b884e4d4f13bcd8a973 872 Pfam PF01370 NAD dependent epimerase/dehydratase family 7 213 1.9E-24 T 12-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 JDM601_3727 01506f6842242b884e4d4f13bcd8a973 872 Gene3D G3DSA:3.40.50.720 1 308 5.1E-51 T 12-10-2018 JDM601_3120 9ff2b59df82c35f342c9fafbb47568f6 384 Pfam PF00849 RNA pseudouridylate synthase 92 235 3.3E-21 T 12-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 JDM601_3120 9ff2b59df82c35f342c9fafbb47568f6 384 Gene3D G3DSA:3.30.2350.10 76 285 7.3E-42 T 12-10-2018 JDM601_3120 9ff2b59df82c35f342c9fafbb47568f6 384 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 131 145 - T 12-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 JDM601_3120 9ff2b59df82c35f342c9fafbb47568f6 384 SUPERFAMILY SSF55120 78 283 1.04E-45 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 JDM601_2624 63e010f4b2d91e189dbcf6bbe7a4afc6 234 Gene3D G3DSA:3.30.420.10 14 231 2.2E-59 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 JDM601_2624 63e010f4b2d91e189dbcf6bbe7a4afc6 234 SUPERFAMILY SSF53098 21 214 3.19E-56 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily JDM601_2624 63e010f4b2d91e189dbcf6bbe7a4afc6 234 Hamap MF_00052_B Ribonuclease HII [rnhB]. 31 210 34.372 T 12-10-2018 IPR022898 Ribonuclease HII GO:0004523 JDM601_2624 63e010f4b2d91e189dbcf6bbe7a4afc6 234 Pfam PF01351 Ribonuclease HII 33 210 3.1E-40 T 12-10-2018 IPR024567 Ribonuclease HII/HIII domain JDM601_0293 c2457e337375e2cc652eff244bc6221b 103 ProDom PD195452 PE FAMILY PRECURSOR PE-FAMILY SIGNAL PE15 PE_1 44 97 1.0E-14 T 12-10-2018 JDM601_0293 c2457e337375e2cc652eff244bc6221b 103 Pfam PF00934 PE family 3 92 1.4E-22 T 12-10-2018 IPR000084 PE-PGRS family, N-terminal JDM601_0293 c2457e337375e2cc652eff244bc6221b 103 SUPERFAMILY SSF140459 7 73 1.94E-13 T 12-10-2018 JDM601_0293 c2457e337375e2cc652eff244bc6221b 103 Gene3D G3DSA:1.10.287.850 1 97 5.9E-14 T 12-10-2018 JDM601_2323 06df2937be32fc8fdebd7e885f495e48 452 Gene3D G3DSA:3.40.190.10 211 341 3.6E-13 T 12-10-2018 JDM601_2323 06df2937be32fc8fdebd7e885f495e48 452 Pfam PF09084 NMT1/THI5 like 129 265 5.0E-7 T 12-10-2018 IPR015168 SsuA/THI5-like JDM601_2323 06df2937be32fc8fdebd7e885f495e48 452 Gene3D G3DSA:3.40.190.10 28 171 1.8E-22 T 12-10-2018 JDM601_2323 06df2937be32fc8fdebd7e885f495e48 452 SUPERFAMILY SSF160387 366 451 4.71E-6 T 12-10-2018 JDM601_2323 06df2937be32fc8fdebd7e885f495e48 452 SUPERFAMILY SSF53850 68 314 1.98E-27 T 12-10-2018 JDM601_2988 927013014364808a6b203efebe00b7a4 485 Gene3D G3DSA:3.40.50.720 246 406 1.1E-232 T 12-10-2018 JDM601_2988 927013014364808a6b203efebe00b7a4 485 TIGRFAM TIGR00936 ahcY: adenosylhomocysteinase 13 477 1.4E-196 T 12-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 JDM601_2988 927013014364808a6b203efebe00b7a4 485 Pfam PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain 243 405 1.1E-79 T 12-10-2018 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 JDM601_2988 927013014364808a6b203efebe00b7a4 485 SMART SM00997 243 405 9.3E-104 T 12-10-2018 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 JDM601_2988 927013014364808a6b203efebe00b7a4 485 PIRSF PIRSF001109 1 485 6.2E-194 T 12-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 JDM601_2988 927013014364808a6b203efebe00b7a4 485 Pfam PF05221 S-adenosyl-L-homocysteine hydrolase 12 484 3.7E-147 T 12-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 JDM601_2988 927013014364808a6b203efebe00b7a4 485 SMART SM00996 12 484 0.0 T 12-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 JDM601_2988 927013014364808a6b203efebe00b7a4 485 Hamap MF_00563 Adenosylhomocysteinase [ahcY]. 8 477 47.515 T 12-10-2018 IPR034373 Adenosylhomocysteinase GO:0004013|GO:0019510|GO:0051287 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-2408508|Reactome: R-HSA-5578997 JDM601_2988 927013014364808a6b203efebe00b7a4 485 SUPERFAMILY SSF51735 243 405 4.03E-70 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_2988 927013014364808a6b203efebe00b7a4 485 SUPERFAMILY SSF52283 11 485 1.7E-112 T 12-10-2018 JDM601_2988 927013014364808a6b203efebe00b7a4 485 Gene3D G3DSA:3.40.50.1480 15 485 1.1E-232 T 12-10-2018 JDM601_2988 927013014364808a6b203efebe00b7a4 485 ProSitePatterns PS00738 S-adenosyl-L-homocysteine hydrolase signature 1. 84 98 - T 12-10-2018 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 JDM601_2988 927013014364808a6b203efebe00b7a4 485 ProSitePatterns PS00739 S-adenosyl-L-homocysteine hydrolase signature 2. 265 281 - T 12-10-2018 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 JDM601_0329 d7a38b2074da3010243a7de80950aa60 425 Gene3D G3DSA:3.40.640.10 73 315 2.4E-137 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 JDM601_0329 d7a38b2074da3010243a7de80950aa60 425 SUPERFAMILY SSF53383 36 420 8.02E-93 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase JDM601_0329 d7a38b2074da3010243a7de80950aa60 425 Pfam PF00155 Aminotransferase class I and II 55 402 1.1E-46 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 JDM601_0329 d7a38b2074da3010243a7de80950aa60 425 Gene3D G3DSA:3.90.1150.10 42 419 2.4E-137 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 JDM601_1171 3e21a6daed3ba9fde73f3645c008c4c2 244 Gene3D G3DSA:1.10.10.10 13 99 1.9E-8 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JDM601_1171 3e21a6daed3ba9fde73f3645c008c4c2 244 SUPERFAMILY SSF46785 22 218 9.98E-19 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JDM601_1295 d2631e7c5e8f93d85acef9b0b33210e3 316 Pfam PF00288 GHMP kinases N terminal domain 88 152 5.2E-11 T 12-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 JDM601_1295 d2631e7c5e8f93d85acef9b0b33210e3 316 SUPERFAMILY SSF54211 13 158 2.28E-26 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold JDM601_1295 d2631e7c5e8f93d85acef9b0b33210e3 316 Pfam PF08544 GHMP kinases C terminal 236 289 5.0E-6 T 12-10-2018 IPR013750 GHMP kinase, C-terminal domain JDM601_1295 d2631e7c5e8f93d85acef9b0b33210e3 316 PRINTS PR00958 Homoserine kinase signature 18 33 4.5E-37 T 12-10-2018 JDM601_1295 d2631e7c5e8f93d85acef9b0b33210e3 316 PRINTS PR00958 Homoserine kinase signature 101 116 4.5E-37 T 12-10-2018 JDM601_1295 d2631e7c5e8f93d85acef9b0b33210e3 316 PRINTS PR00958 Homoserine kinase signature 139 152 4.5E-37 T 12-10-2018 JDM601_1295 d2631e7c5e8f93d85acef9b0b33210e3 316 PRINTS PR00958 Homoserine kinase signature 184 201 4.5E-37 T 12-10-2018 JDM601_1295 d2631e7c5e8f93d85acef9b0b33210e3 316 PRINTS PR00958 Homoserine kinase signature 261 276 4.5E-37 T 12-10-2018 JDM601_1295 d2631e7c5e8f93d85acef9b0b33210e3 316 SUPERFAMILY SSF55060 180 303 7.91E-23 T 12-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily JDM601_1295 d2631e7c5e8f93d85acef9b0b33210e3 316 PIRSF PIRSF000676 7 315 1.3E-76 T 12-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 JDM601_1295 d2631e7c5e8f93d85acef9b0b33210e3 316 Gene3D G3DSA:3.30.70.890 177 278 6.8E-75 T 12-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily JDM601_1295 d2631e7c5e8f93d85acef9b0b33210e3 316 Gene3D G3DSA:3.30.230.10 13 176 6.8E-75 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup JDM601_1295 d2631e7c5e8f93d85acef9b0b33210e3 316 Hamap MF_00384 Homoserine kinase [thrB]. 13 315 27.095 T 12-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 JDM601_1295 d2631e7c5e8f93d85acef9b0b33210e3 316 TIGRFAM TIGR00191 thrB: homoserine kinase 12 281 6.0E-61 T 12-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 JDM601_1354 2eedc09c3667796824157088b9930fa0 277 Pfam PF10935 Protein of unknown function (DUF2637) 86 150 2.8E-13 T 12-10-2018 IPR021235 Protein of unknown function DUF2637 JDM601_4238 a1c2ee15213cf29b0b136209aeee951d 306 Gene3D G3DSA:3.20.20.30 5 306 9.4E-69 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 JDM601_4238 a1c2ee15213cf29b0b136209aeee951d 306 TIGRFAM TIGR03619 F420_Rv2161c: probable F420-dependent oxidoreductase, Rv2161c family 26 282 5.5E-80 T 12-10-2018 IPR019921 Luciferase-like, F420-dependent oxidoreductase, Rv2161c, predicted JDM601_4238 a1c2ee15213cf29b0b136209aeee951d 306 SUPERFAMILY SSF51679 1 305 1.18E-63 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 JDM601_4238 a1c2ee15213cf29b0b136209aeee951d 306 Pfam PF00296 Luciferase-like monooxygenase 19 245 1.6E-50 T 12-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 JDM601_2746 569dabd40c26f42e459e6617a17022e5 247 Gene3D G3DSA:3.40.50.720 2 246 3.5E-35 T 12-10-2018 JDM601_2746 569dabd40c26f42e459e6617a17022e5 247 Pfam PF13460 NAD(P)H-binding 7 174 9.2E-15 T 12-10-2018 IPR016040 NAD(P)-binding domain JDM601_2746 569dabd40c26f42e459e6617a17022e5 247 SUPERFAMILY SSF51735 1 206 7.78E-37 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_1539 be3a4b40e3c09a47688ff20f02abffa0 248 Gene3D G3DSA:3.40.50.1820 17 247 1.9E-50 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_1539 be3a4b40e3c09a47688ff20f02abffa0 248 SUPERFAMILY SSF53474 19 244 5.35E-41 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_1539 be3a4b40e3c09a47688ff20f02abffa0 248 Pfam PF00975 Thioesterase domain 28 245 3.7E-45 T 12-10-2018 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 JDM601_3266 0febf1b0b7385f3660e9963c90ef8389 100 Pfam PF10824 Excreted virulence factor EspC, type VII ESX diderm 5 100 1.3E-7 T 12-10-2018 IPR022536 ESX-1 secretion-associated protein EspC GO:0009306 JDM601_2298 b4e88dd702e439c783d80caefcaf53ab 452 Pfam PF06259 Alpha/beta hydrolase 185 351 2.1E-29 T 12-10-2018 IPR010427 Protein of unknown function DUF1023 JDM601_2298 b4e88dd702e439c783d80caefcaf53ab 452 Gene3D G3DSA:3.40.50.1820 219 443 1.6E-7 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_2298 b4e88dd702e439c783d80caefcaf53ab 452 SUPERFAMILY SSF53474 266 320 1.4E-7 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_2298 b4e88dd702e439c783d80caefcaf53ab 452 Pfam PF10774 Domain of unknown function (DUF4226) 4 115 2.4E-35 T 12-10-2018 IPR019710 Protein of unknown function DUF4226 JDM601_4056 c5bd4a3cd281fdc083437b6cf42c200e 274 Pfam PF00378 Enoyl-CoA hydratase/isomerase 11 273 1.9E-43 T 12-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 JDM601_4056 c5bd4a3cd281fdc083437b6cf42c200e 274 SUPERFAMILY SSF52096 3 273 3.02E-71 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily JDM601_4056 c5bd4a3cd281fdc083437b6cf42c200e 274 Gene3D G3DSA:3.90.226.10 1 215 7.6E-61 T 12-10-2018 JDM601_4056 c5bd4a3cd281fdc083437b6cf42c200e 274 Gene3D G3DSA:1.10.12.10 216 272 2.4E-17 T 12-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal JDM601_0387 cc561ef894ce741108b2019095f60458 65 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 3 65 1.2E-21 T 12-10-2018 IPR010035 ThiS, thiamine-biosynthesis JDM601_0387 cc561ef894ce741108b2019095f60458 65 SUPERFAMILY SSF54285 3 64 4.22E-15 T 12-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp JDM601_0387 cc561ef894ce741108b2019095f60458 65 Gene3D G3DSA:3.10.20.30 1 65 1.1E-21 T 12-10-2018 IPR012675 Beta-grasp domain superfamily JDM601_0387 cc561ef894ce741108b2019095f60458 65 Pfam PF02597 ThiS family 7 65 3.7E-14 T 12-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 JDM601_3590 29942deb4fcf4a0e7a6ce0f0ee23ac02 206 Gene3D G3DSA:1.10.357.10 5 202 2.4E-37 T 12-10-2018 JDM601_3590 29942deb4fcf4a0e7a6ce0f0ee23ac02 206 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 1.5E-6 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_3590 29942deb4fcf4a0e7a6ce0f0ee23ac02 206 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 1.5E-6 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_3590 29942deb4fcf4a0e7a6ce0f0ee23ac02 206 SUPERFAMILY SSF46689 3 81 8.21E-14 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JDM601_3590 29942deb4fcf4a0e7a6ce0f0ee23ac02 206 SUPERFAMILY SSF48498 123 197 8.15E-6 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily JDM601_3590 29942deb4fcf4a0e7a6ce0f0ee23ac02 206 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 60 2.5E-8 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_2598 5f8e19cf4bf6aebe60530929e4ad0bcd 259 Pfam PF01148 Cytidylyltransferase family 3 257 3.7E-60 T 12-10-2018 JDM601_2598 5f8e19cf4bf6aebe60530929e4ad0bcd 259 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 216 242 - T 12-10-2018 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7817 JDM601_0727 644e870cc8a7833a58801e6aed685d01 511 Pfam PF08450 SMP-30/Gluconolaconase/LRE-like region 13 230 1.4E-12 T 12-10-2018 IPR013658 SMP-30/Gluconolactonase/LRE-like region JDM601_0727 644e870cc8a7833a58801e6aed685d01 511 SUPERFAMILY SSF63829 231 445 2.81E-23 T 12-10-2018 JDM601_0727 644e870cc8a7833a58801e6aed685d01 511 SUPERFAMILY SSF50969 424 506 4.24E-5 T 12-10-2018 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like JDM601_0727 644e870cc8a7833a58801e6aed685d01 511 SUPERFAMILY SSF101898 6 236 8.63E-30 T 12-10-2018 JDM601_0727 644e870cc8a7833a58801e6aed685d01 511 Gene3D G3DSA:2.120.10.30 300 510 9.0E-18 T 12-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like JDM601_0727 644e870cc8a7833a58801e6aed685d01 511 Gene3D G3DSA:2.120.10.30 2 89 5.7E-7 T 12-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like JDM601_0727 644e870cc8a7833a58801e6aed685d01 511 Gene3D G3DSA:2.120.10.30 90 276 1.8E-10 T 12-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like JDM601_2119 7163c4ed853dead11cec2f5af586b686 331 Pfam PF13280 WYL domain 152 323 7.5E-27 T 12-10-2018 IPR026881 WYL domain JDM601_1981 8a9048aaf2bda61ba35e996ccaebe0a6 334 Gene3D G3DSA:1.10.8.300 208 316 7.5E-31 T 12-10-2018 JDM601_1981 8a9048aaf2bda61ba35e996ccaebe0a6 334 SUPERFAMILY SSF52540 18 296 6.75E-46 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_1981 8a9048aaf2bda61ba35e996ccaebe0a6 334 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 46 175 8.8E-64 T 12-10-2018 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 JDM601_1981 8a9048aaf2bda61ba35e996ccaebe0a6 334 Gene3D G3DSA:3.40.50.300 27 193 1.4E-43 T 12-10-2018 JDM601_1981 8a9048aaf2bda61ba35e996ccaebe0a6 334 PIRSF PIRSF002849 2 321 3.5E-127 T 12-10-2018 JDM601_0996 f3b2c19dc2cd2ab5fdd421de21de9ebb 273 Pfam PF12484 Polymorphic PE/PPE proteins C terminal 191 270 1.4E-7 T 12-10-2018 IPR022171 PPE family, C-terminal JDM601_0996 f3b2c19dc2cd2ab5fdd421de21de9ebb 273 SUPERFAMILY SSF140459 8 84 2.33E-22 T 12-10-2018 JDM601_0996 f3b2c19dc2cd2ab5fdd421de21de9ebb 273 Pfam PF00934 PE family 1 93 8.4E-31 T 12-10-2018 IPR000084 PE-PGRS family, N-terminal JDM601_0996 f3b2c19dc2cd2ab5fdd421de21de9ebb 273 Gene3D G3DSA:1.10.287.850 1 98 8.6E-31 T 12-10-2018 JDM601_0146 3bc9f27fb2ae7858e5c1dae9e28bbe53 240 Pfam PF02678 Pirin 12 122 8.8E-36 T 12-10-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 JDM601_0146 3bc9f27fb2ae7858e5c1dae9e28bbe53 240 SUPERFAMILY SSF51182 7 234 1.36E-60 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily JDM601_0146 3bc9f27fb2ae7858e5c1dae9e28bbe53 240 PIRSF PIRSF006232 5 235 7.5E-48 T 12-10-2018 IPR012093 Pirin Reactome: R-HSA-8935690 JDM601_0146 3bc9f27fb2ae7858e5c1dae9e28bbe53 240 Gene3D G3DSA:2.60.120.10 11 234 9.8E-71 T 12-10-2018 IPR014710 RmlC-like jelly roll fold JDM601_0146 3bc9f27fb2ae7858e5c1dae9e28bbe53 240 Gene3D G3DSA:2.60.120.10 14 138 9.8E-71 T 12-10-2018 IPR014710 RmlC-like jelly roll fold JDM601_2690 4f8dd6096e4305b975dcc739c86fa136 198 SUPERFAMILY SSF52016 1 185 1.43E-50 T 12-10-2018 JDM601_2690 4f8dd6096e4305b975dcc739c86fa136 198 Pfam PF00694 Aconitase C-terminal domain 1 116 4.4E-23 T 12-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 JDM601_2690 4f8dd6096e4305b975dcc739c86fa136 198 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 1 191 37.269 T 12-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 JDM601_2690 4f8dd6096e4305b975dcc739c86fa136 198 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 1 180 6.9E-52 T 12-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 JDM601_2690 4f8dd6096e4305b975dcc739c86fa136 198 Gene3D G3DSA:3.20.19.10 1 168 2.0E-64 T 12-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 JDM601_1696 0907454052203957965dc96b957fb887 362 Gene3D G3DSA:3.40.50.10210 56 333 1.2E-121 T 12-10-2018 JDM601_1696 0907454052203957965dc96b957fb887 362 TIGRFAM TIGR03160 cobT_DBIPRT: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 13 350 4.7E-120 T 12-10-2018 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 JDM601_1696 0907454052203957965dc96b957fb887 362 SUPERFAMILY SSF52733 7 351 8.89E-111 T 12-10-2018 IPR036087 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like superfamily GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 JDM601_1696 0907454052203957965dc96b957fb887 362 Pfam PF02277 Phosphoribosyltransferase 9 350 1.2E-131 T 12-10-2018 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 JDM601_1696 0907454052203957965dc96b957fb887 362 Gene3D G3DSA:1.10.1610.10 10 339 1.2E-121 T 12-10-2018 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 JDM601_1696 0907454052203957965dc96b957fb887 362 Hamap MF_00230 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [cobT]. 11 352 35.81 T 12-10-2018 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 JDM601_3806 a5ffd512b2e6e8dbadc3d6725df7273a 499 Gene3D G3DSA:3.40.309.10 275 467 1.5E-156 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 JDM601_3806 a5ffd512b2e6e8dbadc3d6725df7273a 499 Gene3D G3DSA:3.40.605.10 30 492 1.5E-156 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 JDM601_3806 a5ffd512b2e6e8dbadc3d6725df7273a 499 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 267 274 - T 12-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 JDM601_3806 a5ffd512b2e6e8dbadc3d6725df7273a 499 SUPERFAMILY SSF53720 13 495 2.09E-141 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 JDM601_3806 a5ffd512b2e6e8dbadc3d6725df7273a 499 Pfam PF00171 Aldehyde dehydrogenase family 25 494 4.2E-144 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 JDM601_1629 6c8309e4e9fc290d786083a66940b623 523 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 376 517 2.6E-28 T 12-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 JDM601_1629 6c8309e4e9fc290d786083a66940b623 523 Gene3D G3DSA:3.40.50.970 326 522 2.4E-44 T 12-10-2018 JDM601_1629 6c8309e4e9fc290d786083a66940b623 523 SUPERFAMILY SSF52518 337 520 1.97E-40 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold JDM601_1629 6c8309e4e9fc290d786083a66940b623 523 SUPERFAMILY SSF52518 2 167 1.47E-33 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold JDM601_1629 6c8309e4e9fc290d786083a66940b623 523 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 3 166 3.1E-31 T 12-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 JDM601_1629 6c8309e4e9fc290d786083a66940b623 523 Gene3D G3DSA:3.40.50.970 1 179 2.6E-39 T 12-10-2018 JDM601_1514 b8fc6b770fc59aeb641995dfe2c09bf0 271 TIGRFAM TIGR02140 permease_CysW: sulfate ABC transporter, permease protein CysW 7 265 5.8E-107 T 12-10-2018 IPR011866 Sulphate ABC transporter, permease protein CysW GO:0008272|GO:0015116|GO:0016021 JDM601_1514 b8fc6b770fc59aeb641995dfe2c09bf0 271 SUPERFAMILY SSF161098 16 257 8.11E-50 T 12-10-2018 IPR035906 MetI-like superfamily JDM601_1514 b8fc6b770fc59aeb641995dfe2c09bf0 271 Gene3D G3DSA:1.10.3720.10 8 265 3.8E-61 T 12-10-2018 IPR035906 MetI-like superfamily JDM601_1514 b8fc6b770fc59aeb641995dfe2c09bf0 271 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 13 264 1.2E-101 T 12-10-2018 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 JDM601_1514 b8fc6b770fc59aeb641995dfe2c09bf0 271 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 73 257 1.5E-17 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 JDM601_1412 e2135e92a29db7b1d7cdacebc99e4bde 357 Pfam PF06742 Protein of unknown function (DUF1214) 267 339 2.0E-6 T 12-10-2018 IPR010621 Domain of unknown function DUF1214 JDM601_1412 e2135e92a29db7b1d7cdacebc99e4bde 357 Pfam PF06742 Protein of unknown function (DUF1214) 89 172 3.0E-4 T 12-10-2018 IPR010621 Domain of unknown function DUF1214 JDM601_1412 e2135e92a29db7b1d7cdacebc99e4bde 357 SUPERFAMILY SSF160935 243 340 1.18E-6 T 12-10-2018 JDM601_1642 741291ae10614998847e177c934c04e6 526 Gene3D G3DSA:1.10.45.10 486 525 1.7E-9 T 12-10-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 JDM601_1642 741291ae10614998847e177c934c04e6 526 SUPERFAMILY SSF55103 279 526 2.62E-39 T 12-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 JDM601_1642 741291ae10614998847e177c934c04e6 526 Gene3D G3DSA:3.30.465.40 68 274 3.1E-137 T 12-10-2018 JDM601_1642 741291ae10614998847e177c934c04e6 526 Pfam PF01565 FAD binding domain 97 235 5.8E-32 T 12-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 JDM601_1642 741291ae10614998847e177c934c04e6 526 Gene3D G3DSA:3.40.462.40 78 481 3.1E-137 T 12-10-2018 JDM601_1642 741291ae10614998847e177c934c04e6 526 SUPERFAMILY SSF56176 52 275 6.13E-46 T 12-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 JDM601_1642 741291ae10614998847e177c934c04e6 526 Pfam PF02913 FAD linked oxidases, C-terminal domain 275 524 2.9E-45 T 12-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 JDM601_0117 c9ae38108a0eeee4e0ea822ce079ea62 154 Pfam PF03061 Thioesterase superfamily 33 113 1.2E-12 T 12-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 JDM601_0117 c9ae38108a0eeee4e0ea822ce079ea62 154 Gene3D G3DSA:3.10.129.10 10 153 7.1E-40 T 12-10-2018 JDM601_0117 c9ae38108a0eeee4e0ea822ce079ea62 154 SUPERFAMILY SSF54637 15 150 8.57E-34 T 12-10-2018 IPR029069 HotDog domain superfamily JDM601_1110 a80b2247661462641419c905664cb0eb 370 Gene3D G3DSA:3.40.50.2300 46 322 2.0E-28 T 12-10-2018 JDM601_1110 a80b2247661462641419c905664cb0eb 370 Pfam PF13458 Periplasmic binding protein 9 337 7.2E-25 T 12-10-2018 IPR028081 Leucine-binding protein domain JDM601_1110 a80b2247661462641419c905664cb0eb 370 SUPERFAMILY SSF53822 8 344 7.36E-32 T 12-10-2018 IPR028082 Periplasmic binding protein-like I JDM601_1110 a80b2247661462641419c905664cb0eb 370 Gene3D G3DSA:3.40.50.2300 131 259 2.0E-28 T 12-10-2018 JDM601_2330 aac27143bde272a425d628464d0a6bcb 353 Pfam PF00557 Metallopeptidase family M24 126 328 4.9E-63 T 12-10-2018 IPR000994 Peptidase M24 JDM601_2330 aac27143bde272a425d628464d0a6bcb 353 SUPERFAMILY SSF55920 119 351 2.49E-70 T 12-10-2018 IPR036005 Creatinase/aminopeptidase-like JDM601_2330 aac27143bde272a425d628464d0a6bcb 353 Gene3D G3DSA:3.90.230.10 118 352 6.9E-74 T 12-10-2018 JDM601_2330 aac27143bde272a425d628464d0a6bcb 353 Gene3D G3DSA:3.40.350.10 1 117 9.2E-25 T 12-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal JDM601_2330 aac27143bde272a425d628464d0a6bcb 353 Pfam PF01321 Creatinase/Prolidase N-terminal domain 1 117 2.0E-17 T 12-10-2018 IPR000587 Creatinase, N-terminal GO:0016787 JDM601_2330 aac27143bde272a425d628464d0a6bcb 353 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 276 288 - T 12-10-2018 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site JDM601_2330 aac27143bde272a425d628464d0a6bcb 353 SUPERFAMILY SSF53092 2 116 6.8E-16 T 12-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal JDM601_2330 aac27143bde272a425d628464d0a6bcb 353 PRINTS PR00599 Methionine aminopeptidase-1 signature 200 216 7.2E-6 T 12-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 JDM601_2330 aac27143bde272a425d628464d0a6bcb 353 PRINTS PR00599 Methionine aminopeptidase-1 signature 298 310 7.2E-6 T 12-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 JDM601_2330 aac27143bde272a425d628464d0a6bcb 353 PRINTS PR00599 Methionine aminopeptidase-1 signature 178 191 7.2E-6 T 12-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 JDM601_3052 3b566db488d34ed81c072295adcc72dc 222 SUPERFAMILY SSF81301 4 140 4.03E-23 T 12-10-2018 JDM601_3052 3b566db488d34ed81c072295adcc72dc 222 Pfam PF14907 Uncharacterised nucleotidyltransferase 5 173 1.9E-8 T 12-10-2018 IPR039498 Uncharacterised nucleotidyltransferase JDM601_3052 3b566db488d34ed81c072295adcc72dc 222 Gene3D G3DSA:3.30.460.40 1 135 6.9E-11 T 12-10-2018 JDM601_0033 d31f3f8c304fc5b01a1e56dc2dca2dc2 341 SMART SM00829 7 339 5.0E-6 T 12-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 JDM601_0033 d31f3f8c304fc5b01a1e56dc2dca2dc2 341 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 126 8.2E-24 T 12-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 JDM601_0033 d31f3f8c304fc5b01a1e56dc2dca2dc2 341 Pfam PF00107 Zinc-binding dehydrogenase 176 300 1.3E-22 T 12-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 JDM601_0033 d31f3f8c304fc5b01a1e56dc2dca2dc2 341 SUPERFAMILY SSF51735 140 305 6.44E-37 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_0033 d31f3f8c304fc5b01a1e56dc2dca2dc2 341 Gene3D G3DSA:3.40.50.720 154 285 2.5E-93 T 12-10-2018 JDM601_0033 d31f3f8c304fc5b01a1e56dc2dca2dc2 341 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 58 72 - T 12-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 JDM601_0033 d31f3f8c304fc5b01a1e56dc2dca2dc2 341 SUPERFAMILY SSF50129 1 164 1.08E-45 T 12-10-2018 IPR011032 GroES-like superfamily JDM601_0033 d31f3f8c304fc5b01a1e56dc2dca2dc2 341 Gene3D G3DSA:3.90.180.10 14 326 2.5E-93 T 12-10-2018 JDM601_3071 288b8d03591375f32599f5372bb87822 217 SUPERFAMILY SSF53335 4 172 6.6E-33 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JDM601_3071 288b8d03591375f32599f5372bb87822 217 TIGRFAM TIGR00537 hemK_rel_arch: putative methylase 6 187 6.7E-28 T 12-10-2018 IPR004557 Eukaryotic/archaeal PrmC-related GO:0008276 Reactome: R-HSA-156581|Reactome: R-HSA-72764 JDM601_3071 288b8d03591375f32599f5372bb87822 217 Gene3D G3DSA:3.40.50.150 1 181 1.4E-35 T 12-10-2018 JDM601_3071 288b8d03591375f32599f5372bb87822 217 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 96 102 - T 12-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 JDM601_3071 288b8d03591375f32599f5372bb87822 217 Pfam PF05175 Methyltransferase small domain 12 102 1.4E-14 T 12-10-2018 IPR007848 Methyltransferase small domain GO:0008168 JDM601_3870 a0aa4590b5bf37806db80e49d2c2a01f 313 Pfam PF00588 SpoU rRNA Methylase family 166 305 1.0E-34 T 12-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 JDM601_3870 a0aa4590b5bf37806db80e49d2c2a01f 313 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 72 312 2.7E-58 T 12-10-2018 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 Reactome: R-HSA-6793080 JDM601_3870 a0aa4590b5bf37806db80e49d2c2a01f 313 SMART SM00967 73 149 3.3E-16 T 12-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 JDM601_3870 a0aa4590b5bf37806db80e49d2c2a01f 313 Gene3D G3DSA:3.30.1330.30 62 145 1.1E-9 T 12-10-2018 IPR029064 50S ribosomal protein L30e-like JDM601_3870 a0aa4590b5bf37806db80e49d2c2a01f 313 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 74 148 1.7E-17 T 12-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 JDM601_3870 a0aa4590b5bf37806db80e49d2c2a01f 313 SUPERFAMILY SSF55315 64 146 2.71E-16 T 12-10-2018 IPR029064 50S ribosomal protein L30e-like JDM601_3870 a0aa4590b5bf37806db80e49d2c2a01f 313 Gene3D G3DSA:3.40.1280.10 146 313 8.2E-50 T 12-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal JDM601_3870 a0aa4590b5bf37806db80e49d2c2a01f 313 SUPERFAMILY SSF75217 137 313 6.54E-43 T 12-10-2018 IPR029028 Alpha/beta knot methyltransferases JDM601_1766 79cef80092f0775b88cdae142110f793 169 Gene3D G3DSA:1.10.1740.10 4 76 1.2E-19 T 12-10-2018 JDM601_1766 79cef80092f0775b88cdae142110f793 169 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 8 161 1.2E-25 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 JDM601_1766 79cef80092f0775b88cdae142110f793 169 Pfam PF04542 Sigma-70 region 2 12 77 2.4E-17 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 JDM601_1766 79cef80092f0775b88cdae142110f793 169 Pfam PF04545 Sigma-70, region 4 111 160 4.5E-14 T 12-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 JDM601_1766 79cef80092f0775b88cdae142110f793 169 SUPERFAMILY SSF88946 8 82 4.32E-20 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 JDM601_1766 79cef80092f0775b88cdae142110f793 169 SUPERFAMILY SSF88659 102 163 1.9E-14 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like JDM601_1766 79cef80092f0775b88cdae142110f793 169 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 34 66 - T 12-10-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 JDM601_1766 79cef80092f0775b88cdae142110f793 169 Gene3D G3DSA:1.10.10.10 97 169 5.0E-31 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JDM601_1162 23850e7a265da058dfc09e30d8a6b567 676 SUPERFAMILY SSF51905 462 654 1.12E-17 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_1162 23850e7a265da058dfc09e30d8a6b567 676 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 378 637 7.4E-24 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JDM601_1162 23850e7a265da058dfc09e30d8a6b567 676 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 498 516 3.1E-9 T 12-10-2018 JDM601_1162 23850e7a265da058dfc09e30d8a6b567 676 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 379 398 3.1E-9 T 12-10-2018 JDM601_1162 23850e7a265da058dfc09e30d8a6b567 676 SUPERFAMILY SSF51395 5 363 2.87E-105 T 12-10-2018 JDM601_1162 23850e7a265da058dfc09e30d8a6b567 676 Gene3D G3DSA:3.20.20.70 4 370 3.3E-119 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JDM601_1162 23850e7a265da058dfc09e30d8a6b567 676 Gene3D G3DSA:3.50.50.60 471 629 5.6E-106 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_1162 23850e7a265da058dfc09e30d8a6b567 676 Gene3D G3DSA:3.40.50.720 377 670 5.6E-106 T 12-10-2018 JDM601_1162 23850e7a265da058dfc09e30d8a6b567 676 SUPERFAMILY SSF51971 335 516 1.41E-39 T 12-10-2018 JDM601_1162 23850e7a265da058dfc09e30d8a6b567 676 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 8 333 1.0E-74 T 12-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 JDM601_3588 5db42a3c734057c96220ff7d8ad00562 473 SUPERFAMILY SSF52467 300 473 1.37E-73 T 12-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily JDM601_3588 5db42a3c734057c96220ff7d8ad00562 473 Pfam PF02233 NAD(P) transhydrogenase beta subunit 9 471 4.0E-194 T 12-10-2018 IPR034300 NADP transhydrogenase beta-like domain KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 JDM601_3588 5db42a3c734057c96220ff7d8ad00562 473 PIRSF PIRSF000204 3 473 8.4E-209 T 12-10-2018 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 JDM601_3588 5db42a3c734057c96220ff7d8ad00562 473 Gene3D G3DSA:3.40.50.1220 298 473 4.4E-84 T 12-10-2018 JDM601_3531 f11d2d36632d73417346a4e7ad0fdb98 324 Gene3D G3DSA:1.10.3720.10 80 319 6.7E-31 T 12-10-2018 IPR035906 MetI-like superfamily JDM601_3531 f11d2d36632d73417346a4e7ad0fdb98 324 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 104 317 1.1E-17 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 JDM601_3531 f11d2d36632d73417346a4e7ad0fdb98 324 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 23 317 1.3E-85 T 12-10-2018 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 JDM601_3531 f11d2d36632d73417346a4e7ad0fdb98 324 SUPERFAMILY SSF161098 45 314 9.81E-32 T 12-10-2018 IPR035906 MetI-like superfamily JDM601_1170 5a885f97928e70e763fc730c3db73242 573 TIGRFAM TIGR02891 CtaD_CoxA: cytochrome c oxidase, subunit I 32 535 2.2E-214 T 12-10-2018 IPR014241 Cytochrome c oxidase, subunit I bacterial type GO:0004129|GO:0005886|GO:0015990|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 JDM601_1170 5a885f97928e70e763fc730c3db73242 573 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 40 483 2.2E-150 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 JDM601_1170 5a885f97928e70e763fc730c3db73242 573 SUPERFAMILY SSF81442 28 538 2.09E-175 T 12-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 JDM601_1170 5a885f97928e70e763fc730c3db73242 573 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 260 314 - T 12-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 JDM601_1170 5a885f97928e70e763fc730c3db73242 573 Gene3D G3DSA:1.20.210.10 23 544 1.9E-205 T 12-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 JDM601_1170 5a885f97928e70e763fc730c3db73242 573 PRINTS PR01165 Cytochrome c oxidase subunit I signature 361 379 4.8E-95 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 JDM601_1170 5a885f97928e70e763fc730c3db73242 573 PRINTS PR01165 Cytochrome c oxidase subunit I signature 77 100 4.8E-95 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 JDM601_1170 5a885f97928e70e763fc730c3db73242 573 PRINTS PR01165 Cytochrome c oxidase subunit I signature 258 279 4.8E-95 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 JDM601_1170 5a885f97928e70e763fc730c3db73242 573 PRINTS PR01165 Cytochrome c oxidase subunit I signature 208 227 4.8E-95 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 JDM601_1170 5a885f97928e70e763fc730c3db73242 573 PRINTS PR01165 Cytochrome c oxidase subunit I signature 30 55 4.8E-95 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 JDM601_1170 5a885f97928e70e763fc730c3db73242 573 PRINTS PR01165 Cytochrome c oxidase subunit I signature 439 460 4.8E-95 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 JDM601_1170 5a885f97928e70e763fc730c3db73242 573 PRINTS PR01165 Cytochrome c oxidase subunit I signature 304 319 4.8E-95 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 JDM601_1170 5a885f97928e70e763fc730c3db73242 573 PRINTS PR01165 Cytochrome c oxidase subunit I signature 237 258 4.8E-95 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 JDM601_1170 5a885f97928e70e763fc730c3db73242 573 PRINTS PR01165 Cytochrome c oxidase subunit I signature 326 347 4.8E-95 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 JDM601_1170 5a885f97928e70e763fc730c3db73242 573 PRINTS PR01165 Cytochrome c oxidase subunit I signature 104 128 4.8E-95 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 JDM601_1170 5a885f97928e70e763fc730c3db73242 573 PRINTS PR01165 Cytochrome c oxidase subunit I signature 147 159 4.8E-95 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 JDM601_1170 5a885f97928e70e763fc730c3db73242 573 PRINTS PR01165 Cytochrome c oxidase subunit I signature 179 197 4.8E-95 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 JDM601_1170 5a885f97928e70e763fc730c3db73242 573 PRINTS PR01165 Cytochrome c oxidase subunit I signature 389 408 4.8E-95 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 JDM601_0009 040ac44614b50b5978879614dfbd7cbf 142 Hamap MF_00927 Cell wall synthesis protein CwsA [cwsA]. 4 142 22.165 T 12-10-2018 IPR024245 Cell wall synthesis protein CwsA JDM601_0009 040ac44614b50b5978879614dfbd7cbf 142 ProDom PD070500 MEMBRANE TRANSMEMBRANE MB0008C RV0008C/MT0010 1 87 9.0E-6 T 12-10-2018 IPR024245 Cell wall synthesis protein CwsA JDM601_0009 040ac44614b50b5978879614dfbd7cbf 142 Pfam PF10814 Cell wall synthesis protein CwsA 9 140 2.6E-54 T 12-10-2018 IPR024245 Cell wall synthesis protein CwsA JDM601_3602 64b05883a00ab67dcb1dd16c6b39c8cb 406 SUPERFAMILY SSF48264 11 404 2.62E-88 T 12-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_3602 64b05883a00ab67dcb1dd16c6b39c8cb 406 Pfam PF00067 Cytochrome P450 275 373 1.3E-18 T 12-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_3602 64b05883a00ab67dcb1dd16c6b39c8cb 406 PRINTS PR00359 B-class P450 signature 139 155 8.6E-47 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3602 64b05883a00ab67dcb1dd16c6b39c8cb 406 PRINTS PR00359 B-class P450 signature 156 171 8.6E-47 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3602 64b05883a00ab67dcb1dd16c6b39c8cb 406 PRINTS PR00359 B-class P450 signature 354 365 8.6E-47 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3602 64b05883a00ab67dcb1dd16c6b39c8cb 406 PRINTS PR00359 B-class P450 signature 323 338 8.6E-47 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3602 64b05883a00ab67dcb1dd16c6b39c8cb 406 PRINTS PR00359 B-class P450 signature 295 322 8.6E-47 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3602 64b05883a00ab67dcb1dd16c6b39c8cb 406 PRINTS PR00359 B-class P450 signature 345 354 8.6E-47 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3602 64b05883a00ab67dcb1dd16c6b39c8cb 406 PRINTS PR00359 B-class P450 signature 197 219 8.6E-47 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3602 64b05883a00ab67dcb1dd16c6b39c8cb 406 PRINTS PR00359 B-class P450 signature 278 289 8.6E-47 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3602 64b05883a00ab67dcb1dd16c6b39c8cb 406 PRINTS PR00359 B-class P450 signature 88 99 8.6E-47 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3602 64b05883a00ab67dcb1dd16c6b39c8cb 406 Gene3D G3DSA:1.10.630.10 3 406 5.5E-125 T 12-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_3602 64b05883a00ab67dcb1dd16c6b39c8cb 406 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 347 356 - T 12-10-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 JDM601_1456 a08d1e7960a319cfcaa4e22bc02facef 108 Gene3D G3DSA:1.10.530.10 10 108 1.2E-36 T 12-10-2018 JDM601_1456 a08d1e7960a319cfcaa4e22bc02facef 108 Pfam PF06737 Transglycosylase-like domain 32 104 2.0E-34 T 12-10-2018 IPR010618 Transglycosylase-like JDM601_1456 a08d1e7960a319cfcaa4e22bc02facef 108 SUPERFAMILY SSF53955 31 107 4.44E-32 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily JDM601_1459 80f3578c64b6502e68ecfe8a686133fc 883 Pfam PF08264 Anticodon-binding domain of tRNA 617 756 1.0E-37 T 12-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 JDM601_1459 80f3578c64b6502e68ecfe8a686133fc 883 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 26 574 1.4E-188 T 12-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 JDM601_1459 80f3578c64b6502e68ecfe8a686133fc 883 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 818 882 6.2E-15 T 12-10-2018 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 JDM601_1459 80f3578c64b6502e68ecfe8a686133fc 883 TIGRFAM TIGR00422 valS: valine--tRNA ligase 14 860 1.3E-295 T 12-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 JDM601_1459 80f3578c64b6502e68ecfe8a686133fc 883 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 54 65 - T 12-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 JDM601_1459 80f3578c64b6502e68ecfe8a686133fc 883 SUPERFAMILY SSF50677 203 346 1.24E-49 T 12-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 JDM601_1459 80f3578c64b6502e68ecfe8a686133fc 883 Gene3D G3DSA:1.10.730.10 13 745 2.0E-280 T 12-10-2018 JDM601_1459 80f3578c64b6502e68ecfe8a686133fc 883 SUPERFAMILY SSF52374 13 586 1.28E-130 T 12-10-2018 JDM601_1459 80f3578c64b6502e68ecfe8a686133fc 883 SUPERFAMILY SSF47323 589 831 3.55E-48 T 12-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 JDM601_1459 80f3578c64b6502e68ecfe8a686133fc 883 PRINTS PR00986 Valyl-tRNA synthetase signature 450 471 2.9E-37 T 12-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 JDM601_1459 80f3578c64b6502e68ecfe8a686133fc 883 PRINTS PR00986 Valyl-tRNA synthetase signature 242 259 2.9E-37 T 12-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 JDM601_1459 80f3578c64b6502e68ecfe8a686133fc 883 PRINTS PR00986 Valyl-tRNA synthetase signature 481 499 2.9E-37 T 12-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 JDM601_1459 80f3578c64b6502e68ecfe8a686133fc 883 PRINTS PR00986 Valyl-tRNA synthetase signature 47 58 2.9E-37 T 12-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 JDM601_1459 80f3578c64b6502e68ecfe8a686133fc 883 PRINTS PR00986 Valyl-tRNA synthetase signature 358 371 2.9E-37 T 12-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 JDM601_1459 80f3578c64b6502e68ecfe8a686133fc 883 Gene3D G3DSA:3.90.740.10 186 354 2.0E-280 T 12-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 JDM601_1459 80f3578c64b6502e68ecfe8a686133fc 883 Hamap MF_02004 Valine--tRNA ligase [valS]. 13 883 14.779 T 12-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 JDM601_1459 80f3578c64b6502e68ecfe8a686133fc 883 SUPERFAMILY SSF46589 818 882 7.32E-13 T 12-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 JDM601_1459 80f3578c64b6502e68ecfe8a686133fc 883 Gene3D G3DSA:1.10.287.380 811 883 9.3E-15 T 12-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 JDM601_1459 80f3578c64b6502e68ecfe8a686133fc 883 Gene3D G3DSA:3.40.50.620 33 537 2.0E-280 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JDM601_3662 3b3399fa9fe7d3e888bdd940f69ffe82 394 SUPERFAMILY SSF53901 233 374 4.53E-17 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 JDM601_3662 3b3399fa9fe7d3e888bdd940f69ffe82 394 PIRSF PIRSF000429 1 384 1.9E-20 T 12-10-2018 IPR002155 Thiolase GO:0016747 JDM601_3662 3b3399fa9fe7d3e888bdd940f69ffe82 394 SUPERFAMILY SSF53901 11 226 1.76E-22 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 JDM601_3662 3b3399fa9fe7d3e888bdd940f69ffe82 394 Gene3D G3DSA:3.40.47.10 3 385 1.6E-80 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 JDM601_3325 e116a0e3bb8f2a6e4fcb75aeee351f23 304 SUPERFAMILY SSF53850 89 291 2.87E-39 T 12-10-2018 JDM601_3325 e116a0e3bb8f2a6e4fcb75aeee351f23 304 Gene3D G3DSA:3.40.190.290 91 291 4.9E-46 T 12-10-2018 JDM601_3325 e116a0e3bb8f2a6e4fcb75aeee351f23 304 SUPERFAMILY SSF46785 1 85 1.52E-20 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JDM601_3325 e116a0e3bb8f2a6e4fcb75aeee351f23 304 Gene3D G3DSA:1.10.10.10 1 84 3.2E-27 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JDM601_3325 e116a0e3bb8f2a6e4fcb75aeee351f23 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.7E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JDM601_3325 e116a0e3bb8f2a6e4fcb75aeee351f23 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.7E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JDM601_3325 e116a0e3bb8f2a6e4fcb75aeee351f23 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.7E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JDM601_3325 e116a0e3bb8f2a6e4fcb75aeee351f23 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 4.3E-19 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JDM601_3325 e116a0e3bb8f2a6e4fcb75aeee351f23 304 Pfam PF03466 LysR substrate binding domain 87 286 3.9E-43 T 12-10-2018 IPR005119 LysR, substrate-binding JDM601_0934 73e97d52f98509f774a7a6836597f57b 365 Pfam PF13180 PDZ domain 279 360 1.1E-15 T 12-10-2018 IPR001478 PDZ domain GO:0005515 JDM601_0934 73e97d52f98509f774a7a6836597f57b 365 Gene3D G3DSA:2.40.10.10 150 272 8.0E-48 T 12-10-2018 JDM601_0934 73e97d52f98509f774a7a6836597f57b 365 Pfam PF13365 Trypsin-like peptidase domain 79 230 5.3E-35 T 12-10-2018 JDM601_0934 73e97d52f98509f774a7a6836597f57b 365 PRINTS PR00834 HtrA/DegQ protease family signature 201 218 5.8E-34 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 JDM601_0934 73e97d52f98509f774a7a6836597f57b 365 PRINTS PR00834 HtrA/DegQ protease family signature 308 320 5.8E-34 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 JDM601_0934 73e97d52f98509f774a7a6836597f57b 365 PRINTS PR00834 HtrA/DegQ protease family signature 88 100 5.8E-34 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 JDM601_0934 73e97d52f98509f774a7a6836597f57b 365 PRINTS PR00834 HtrA/DegQ protease family signature 223 240 5.8E-34 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 JDM601_0934 73e97d52f98509f774a7a6836597f57b 365 PRINTS PR00834 HtrA/DegQ protease family signature 160 184 5.8E-34 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 JDM601_0934 73e97d52f98509f774a7a6836597f57b 365 Gene3D G3DSA:2.30.42.10 276 365 3.1E-31 T 12-10-2018 JDM601_0934 73e97d52f98509f774a7a6836597f57b 365 Gene3D G3DSA:2.40.10.10 47 149 4.2E-35 T 12-10-2018 JDM601_0934 73e97d52f98509f774a7a6836597f57b 365 SUPERFAMILY SSF50156 277 362 2.1E-15 T 12-10-2018 IPR036034 PDZ superfamily GO:0005515 JDM601_0934 73e97d52f98509f774a7a6836597f57b 365 SMART SM00228 278 350 7.6E-7 T 12-10-2018 IPR001478 PDZ domain GO:0005515 JDM601_0934 73e97d52f98509f774a7a6836597f57b 365 SUPERFAMILY SSF50494 54 269 1.1E-54 T 12-10-2018 IPR009003 Peptidase S1, PA clan JDM601_0581 afe7a4af11eccab065cb718948630aed 411 Pfam PF10774 Domain of unknown function (DUF4226) 5 115 7.2E-38 T 12-10-2018 IPR019710 Protein of unknown function DUF4226 JDM601_1032 de82e1565f0f3da9e23c82d693c5c96b 237 Pfam PF03006 Haemolysin-III related 26 228 3.6E-38 T 12-10-2018 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 JDM601_1032 de82e1565f0f3da9e23c82d693c5c96b 237 TIGRFAM TIGR01065 hlyIII: channel protein, hemolysin III family 27 234 3.1E-60 T 12-10-2018 IPR005744 Hly-III GO:0016021|GO:0019835 JDM601_2526 320a836fc119a19e8829e0ad90d146b8 245 Gene3D G3DSA:3.40.50.720 3 232 1.5E-87 T 12-10-2018 JDM601_2526 320a836fc119a19e8829e0ad90d146b8 245 SUPERFAMILY SSF51735 1 132 2.92E-33 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_2526 320a836fc119a19e8829e0ad90d146b8 245 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 127 144 - T 12-10-2018 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 JDM601_2526 320a836fc119a19e8829e0ad90d146b8 245 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 108 228 6.9E-29 T 12-10-2018 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 JDM601_2526 320a836fc119a19e8829e0ad90d146b8 245 SUPERFAMILY SSF55347 106 214 2.18E-41 T 12-10-2018 JDM601_2526 320a836fc119a19e8829e0ad90d146b8 245 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 40 243 8.1E-59 T 12-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 JDM601_2526 320a836fc119a19e8829e0ad90d146b8 245 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 1 105 1.6E-23 T 12-10-2018 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 JDM601_2526 320a836fc119a19e8829e0ad90d146b8 245 PIRSF PIRSF000161 1 245 4.3E-62 T 12-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 JDM601_2526 320a836fc119a19e8829e0ad90d146b8 245 Gene3D G3DSA:3.30.360.10 106 212 1.5E-87 T 12-10-2018 JDM601_2526 320a836fc119a19e8829e0ad90d146b8 245 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 1 243 29.284 T 12-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 JDM601_3292 f73ee7b313db39fdb3f1130516a8b535 387 SUPERFAMILY SSF47203 228 380 6.12E-53 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 JDM601_3292 f73ee7b313db39fdb3f1130516a8b535 387 Gene3D G3DSA:2.40.110.10 116 235 1.5E-37 T 12-10-2018 JDM601_3292 f73ee7b313db39fdb3f1130516a8b535 387 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 3 110 2.4E-27 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 JDM601_3292 f73ee7b313db39fdb3f1130516a8b535 387 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 230 378 3.8E-46 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 JDM601_3292 f73ee7b313db39fdb3f1130516a8b535 387 PIRSF PIRSF016578 1 382 7.8E-14 T 12-10-2018 JDM601_3292 f73ee7b313db39fdb3f1130516a8b535 387 SUPERFAMILY SSF56645 2 243 5.76E-73 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 JDM601_3292 f73ee7b313db39fdb3f1130516a8b535 387 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 119 131 - T 12-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 JDM601_3292 f73ee7b313db39fdb3f1130516a8b535 387 Gene3D G3DSA:1.10.540.10 1 113 2.9E-30 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 JDM601_3292 f73ee7b313db39fdb3f1130516a8b535 387 Gene3D G3DSA:1.20.140.10 236 385 1.7E-50 T 12-10-2018 JDM601_3292 f73ee7b313db39fdb3f1130516a8b535 387 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 338 357 - T 12-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 JDM601_3292 f73ee7b313db39fdb3f1130516a8b535 387 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 117 215 1.8E-23 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 JDM601_3332 05856b818abe378d42d69d4ee9c1f424 285 Gene3D G3DSA:3.30.300.20 17 106 3.4E-31 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta JDM601_3332 05856b818abe378d42d69d4ee9c1f424 285 ProSitePatterns PS00548 Ribosomal protein S3 signature. 163 197 - T 12-10-2018 IPR018280 Ribosomal protein S3, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JDM601_3332 05856b818abe378d42d69d4ee9c1f424 285 SUPERFAMILY SSF54821 106 206 5.49E-36 T 12-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JDM601_3332 05856b818abe378d42d69d4ee9c1f424 285 Gene3D G3DSA:3.30.1140.32 107 208 2.4E-39 T 12-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JDM601_3332 05856b818abe378d42d69d4ee9c1f424 285 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 206 38.251 T 12-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 JDM601_3332 05856b818abe378d42d69d4ee9c1f424 285 Pfam PF07650 KH domain 38 109 1.3E-18 T 12-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JDM601_3332 05856b818abe378d42d69d4ee9c1f424 285 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 209 1.2E-94 T 12-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 JDM601_3332 05856b818abe378d42d69d4ee9c1f424 285 SMART SM00322 59 124 7.1E-7 T 12-10-2018 IPR004087 K Homology domain GO:0003676 JDM601_3332 05856b818abe378d42d69d4ee9c1f424 285 SUPERFAMILY SSF54814 2 105 2.4E-36 T 12-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 JDM601_3332 05856b818abe378d42d69d4ee9c1f424 285 Pfam PF00189 Ribosomal protein S3, C-terminal domain 119 202 1.2E-36 T 12-10-2018 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JDM601_1754 03a44bff9841796a0197d781e50dec94 444 SUPERFAMILY SSF53187 8 443 1.51E-56 T 12-10-2018 JDM601_1754 03a44bff9841796a0197d781e50dec94 444 Pfam PF01546 Peptidase family M20/M25/M40 81 442 1.0E-38 T 12-10-2018 IPR002933 Peptidase M20 GO:0016787 JDM601_1754 03a44bff9841796a0197d781e50dec94 444 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 80 89 - T 12-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 JDM601_1754 03a44bff9841796a0197d781e50dec94 444 Gene3D G3DSA:3.30.70.360 209 344 6.5E-16 T 12-10-2018 JDM601_1754 03a44bff9841796a0197d781e50dec94 444 Gene3D G3DSA:3.40.630.10 4 208 8.8E-52 T 12-10-2018 JDM601_1754 03a44bff9841796a0197d781e50dec94 444 SUPERFAMILY SSF55031 205 330 1.24E-10 T 12-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain JDM601_1754 03a44bff9841796a0197d781e50dec94 444 Pfam PF07687 Peptidase dimerisation domain 202 330 4.3E-15 T 12-10-2018 IPR011650 Peptidase M20, dimerisation domain JDM601_2928 b3992f2864b4f9721257a0104cf29e03 263 SUPERFAMILY SSF52540 1 251 4.52E-58 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_2928 b3992f2864b4f9721257a0104cf29e03 263 Gene3D G3DSA:3.40.50.300 1 263 1.6E-84 T 12-10-2018 JDM601_2928 b3992f2864b4f9721257a0104cf29e03 263 Pfam PF13614 AAA domain 1 175 6.0E-52 T 12-10-2018 IPR025669 AAA domain JDM601_3658 355f5329c462f8c1b0b1bdd7a7534d33 515 Gene3D G3DSA:3.40.50.12780 2 402 8.4E-96 T 12-10-2018 JDM601_3658 355f5329c462f8c1b0b1bdd7a7534d33 515 ProSitePatterns PS00455 Putative AMP-binding domain signature. 158 169 - T 12-10-2018 IPR020845 AMP-binding, conserved site JDM601_3658 355f5329c462f8c1b0b1bdd7a7534d33 515 Pfam PF13193 AMP-binding enzyme C-terminal domain 419 497 8.6E-17 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain JDM601_3658 355f5329c462f8c1b0b1bdd7a7534d33 515 Pfam PF00501 AMP-binding enzyme 8 410 1.1E-76 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 JDM601_3658 355f5329c462f8c1b0b1bdd7a7534d33 515 Gene3D G3DSA:3.30.300.310 406 511 3.3E-30 T 12-10-2018 JDM601_3658 355f5329c462f8c1b0b1bdd7a7534d33 515 SUPERFAMILY SSF56801 7 510 3.79E-125 T 12-10-2018 JDM601_3067 6dc4b9ba7c86228549d7e86665850f07 155 Gene3D G3DSA:2.60.40.790 10 145 3.8E-29 T 12-10-2018 IPR008978 HSP20-like chaperone JDM601_3067 6dc4b9ba7c86228549d7e86665850f07 155 Pfam PF00011 Hsp20/alpha crystallin family 48 144 1.4E-23 T 12-10-2018 IPR002068 Alpha crystallin/Hsp20 domain JDM601_3067 6dc4b9ba7c86228549d7e86665850f07 155 SUPERFAMILY SSF49764 15 144 4.88E-31 T 12-10-2018 IPR008978 HSP20-like chaperone JDM601_1678 f09aaf38e9f2eec755b147f5bbe5a6b9 439 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 9 93 7.3E-26 T 12-10-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 JDM601_1678 f09aaf38e9f2eec755b147f5bbe5a6b9 439 SMART SM01230 99 350 4.4E-123 T 12-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 JDM601_1678 f09aaf38e9f2eec755b147f5bbe5a6b9 439 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 227 242 - T 12-10-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 JDM601_1678 f09aaf38e9f2eec755b147f5bbe5a6b9 439 SUPERFAMILY SSF54368 1 98 5.49E-29 T 12-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 JDM601_1678 f09aaf38e9f2eec755b147f5bbe5a6b9 439 Gene3D G3DSA:3.30.590.10 102 438 6.2E-119 T 12-10-2018 JDM601_1678 f09aaf38e9f2eec755b147f5bbe5a6b9 439 Pfam PF00120 Glutamine synthetase, catalytic domain 101 436 6.8E-126 T 12-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 JDM601_1678 f09aaf38e9f2eec755b147f5bbe5a6b9 439 Gene3D G3DSA:3.10.20.70 1 100 3.1E-33 T 12-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 JDM601_1678 f09aaf38e9f2eec755b147f5bbe5a6b9 439 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 3 437 6.7E-131 T 12-10-2018 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 JDM601_1678 f09aaf38e9f2eec755b147f5bbe5a6b9 439 SUPERFAMILY SSF55931 101 437 6.38E-115 T 12-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 JDM601_2391 fe356d94b6d61ac65f1ee3b141a85746 329 SUPERFAMILY SSF51735 132 292 2.75E-36 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_2391 fe356d94b6d61ac65f1ee3b141a85746 329 SMART SM00829 5 327 1.3E-9 T 12-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 JDM601_2391 fe356d94b6d61ac65f1ee3b141a85746 329 SUPERFAMILY SSF50129 3 157 7.91E-50 T 12-10-2018 IPR011032 GroES-like superfamily JDM601_2391 fe356d94b6d61ac65f1ee3b141a85746 329 Gene3D G3DSA:3.90.180.10 7 325 3.0E-97 T 12-10-2018 JDM601_2391 fe356d94b6d61ac65f1ee3b141a85746 329 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 54 68 - T 12-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 JDM601_2391 fe356d94b6d61ac65f1ee3b141a85746 329 Pfam PF00107 Zinc-binding dehydrogenase 169 292 5.4E-20 T 12-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 JDM601_2391 fe356d94b6d61ac65f1ee3b141a85746 329 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 20 126 3.1E-28 T 12-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 JDM601_2391 fe356d94b6d61ac65f1ee3b141a85746 329 Gene3D G3DSA:3.40.50.720 142 278 3.0E-97 T 12-10-2018 JDM601_2650 51a5bf3874bb016c4aa43f4417bf9720 75 Pfam PF00708 Acylphosphatase 1 72 2.8E-18 T 12-10-2018 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 JDM601_2650 51a5bf3874bb016c4aa43f4417bf9720 75 Gene3D G3DSA:3.30.70.100 1 74 1.1E-19 T 12-10-2018 JDM601_2650 51a5bf3874bb016c4aa43f4417bf9720 75 ProSitePatterns PS00151 Acylphosphatase signature 2. 18 34 - T 12-10-2018 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 JDM601_2650 51a5bf3874bb016c4aa43f4417bf9720 75 SUPERFAMILY SSF54975 1 73 1.85E-18 T 12-10-2018 IPR036046 Acylphosphatase-like domain superfamily KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 JDM601_1863 cbadc6cae9595b8afff212bcc5f70d4b 253 Gene3D G3DSA:3.30.70.1560 139 229 7.8E-50 T 12-10-2018 JDM601_1863 cbadc6cae9595b8afff212bcc5f70d4b 253 Pfam PF01479 S4 domain 13 55 4.3E-14 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JDM601_1863 cbadc6cae9595b8afff212bcc5f70d4b 253 SUPERFAMILY SSF55174 9 76 2.55E-14 T 12-10-2018 JDM601_1863 cbadc6cae9595b8afff212bcc5f70d4b 253 Pfam PF00849 RNA pseudouridylate synthase 75 210 2.8E-19 T 12-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 JDM601_1863 cbadc6cae9595b8afff212bcc5f70d4b 253 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 79 240 3.7E-44 T 12-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 JDM601_1863 cbadc6cae9595b8afff212bcc5f70d4b 253 SMART SM00363 13 73 4.6E-10 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JDM601_1863 cbadc6cae9595b8afff212bcc5f70d4b 253 Gene3D G3DSA:3.30.70.580 77 237 7.8E-50 T 12-10-2018 JDM601_1863 cbadc6cae9595b8afff212bcc5f70d4b 253 Gene3D G3DSA:3.10.290.10 7 70 3.9E-22 T 12-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 JDM601_1863 cbadc6cae9595b8afff212bcc5f70d4b 253 SUPERFAMILY SSF55120 71 251 8.1E-44 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 JDM601_1863 cbadc6cae9595b8afff212bcc5f70d4b 253 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 115 129 - T 12-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 JDM601_0823 5c882189cb3d58b4c57d469ed24823e0 236 Pfam PF00072 Response regulator receiver domain 13 123 1.4E-29 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JDM601_0823 5c882189cb3d58b4c57d469ed24823e0 236 Gene3D G3DSA:3.40.50.2300 1 137 7.1E-40 T 12-10-2018 JDM601_0823 5c882189cb3d58b4c57d469ed24823e0 236 Pfam PF00486 Transcriptional regulatory protein, C terminal 160 233 9.2E-26 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 JDM601_0823 5c882189cb3d58b4c57d469ed24823e0 236 SMART SM00448 11 122 6.5E-42 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JDM601_0823 5c882189cb3d58b4c57d469ed24823e0 236 SUPERFAMILY SSF52172 10 184 4.39E-41 T 12-10-2018 IPR011006 CheY-like superfamily JDM601_0823 5c882189cb3d58b4c57d469ed24823e0 236 Gene3D G3DSA:1.10.10.10 138 236 2.0E-32 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JDM601_0823 5c882189cb3d58b4c57d469ed24823e0 236 SMART SM00862 158 233 7.5E-27 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 JDM601_0479 3262dde5f1cc283c454d006dc2011616 227 SMART SM00862 149 225 4.1E-30 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 JDM601_0479 3262dde5f1cc283c454d006dc2011616 227 SUPERFAMILY SSF52172 1 118 7.83E-40 T 12-10-2018 IPR011006 CheY-like superfamily JDM601_0479 3262dde5f1cc283c454d006dc2011616 227 Gene3D G3DSA:3.40.50.2300 1 121 3.8E-36 T 12-10-2018 JDM601_0479 3262dde5f1cc283c454d006dc2011616 227 SUPERFAMILY SSF46894 125 226 1.45E-32 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 JDM601_0479 3262dde5f1cc283c454d006dc2011616 227 Pfam PF00486 Transcriptional regulatory protein, C terminal 149 225 4.2E-28 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 JDM601_0479 3262dde5f1cc283c454d006dc2011616 227 Gene3D G3DSA:1.10.10.10 122 227 2.9E-41 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JDM601_0479 3262dde5f1cc283c454d006dc2011616 227 SMART SM00448 2 112 3.0E-43 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JDM601_0479 3262dde5f1cc283c454d006dc2011616 227 Pfam PF00072 Response regulator receiver domain 4 113 7.6E-28 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JDM601_0372 7805f40c6c66693abeb0a0fe12e5070e 464 Gene3D G3DSA:3.40.50.12780 1 357 4.4E-117 T 12-10-2018 JDM601_0372 7805f40c6c66693abeb0a0fe12e5070e 464 Pfam PF13193 AMP-binding enzyme C-terminal domain 373 448 2.3E-21 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain JDM601_0372 7805f40c6c66693abeb0a0fe12e5070e 464 Gene3D G3DSA:3.30.300.310 360 463 2.7E-34 T 12-10-2018 JDM601_0372 7805f40c6c66693abeb0a0fe12e5070e 464 Pfam PF00501 AMP-binding enzyme 4 364 3.6E-102 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 JDM601_0372 7805f40c6c66693abeb0a0fe12e5070e 464 PRINTS PR00154 AMP-binding signature 112 123 7.6E-5 T 12-10-2018 IPR020459 AMP-binding JDM601_0372 7805f40c6c66693abeb0a0fe12e5070e 464 PRINTS PR00154 AMP-binding signature 124 132 7.6E-5 T 12-10-2018 IPR020459 AMP-binding JDM601_0372 7805f40c6c66693abeb0a0fe12e5070e 464 ProSitePatterns PS00455 Putative AMP-binding domain signature. 117 128 - T 12-10-2018 IPR020845 AMP-binding, conserved site JDM601_0372 7805f40c6c66693abeb0a0fe12e5070e 464 SUPERFAMILY SSF56801 4 461 7.2E-149 T 12-10-2018 JDM601_2729 88ccc4474ec194127e21685a9bf9e07b 222 TIGRFAM TIGR04306 salvage_TenA: thiaminase II 16 216 4.4E-44 T 12-10-2018 IPR027574 Thiaminase II GO:0006772|GO:0050334 KEGG: 00730+3.5.99.2|MetaCyc: PWY-6899|MetaCyc: PWY-7356 JDM601_2729 88ccc4474ec194127e21685a9bf9e07b 222 SUPERFAMILY SSF48613 5 215 8.9E-63 T 12-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 JDM601_2729 88ccc4474ec194127e21685a9bf9e07b 222 Pfam PF03070 TENA/THI-4/PQQC family 10 216 1.3E-39 T 12-10-2018 IPR004305 Thiaminase-2/PQQC JDM601_2729 88ccc4474ec194127e21685a9bf9e07b 222 Gene3D G3DSA:1.20.910.10 1 222 9.2E-66 T 12-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 JDM601_0273 6b1e1e1ed772097839df9668b28f5990 130 Gene3D G3DSA:2.10.150.10 1 128 9.8E-49 T 12-10-2018 IPR036461 Urease, beta subunit superfamily KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 JDM601_0273 6b1e1e1ed772097839df9668b28f5990 130 SUPERFAMILY SSF51278 1 123 3.4E-45 T 12-10-2018 IPR036461 Urease, beta subunit superfamily KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 JDM601_0273 6b1e1e1ed772097839df9668b28f5990 130 TIGRFAM TIGR00192 urease_beta: urease, beta subunit 1 102 5.3E-43 T 12-10-2018 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 JDM601_0273 6b1e1e1ed772097839df9668b28f5990 130 Pfam PF00699 Urease beta subunit 3 99 2.0E-41 T 12-10-2018 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 JDM601_0273 6b1e1e1ed772097839df9668b28f5990 130 Hamap MF_01954 Urease subunit beta [ureB]. 1 101 29.641 T 12-10-2018 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 JDM601_3315 41dfa97d289c8bd8d0a25f09357194aa 232 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 2 206 34.857 T 12-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 JDM601_3315 41dfa97d289c8bd8d0a25f09357194aa 232 ProSitePatterns PS00585 Ribosomal protein S5 signature. 71 103 - T 12-10-2018 IPR018192 Ribosomal protein S5, N-terminal, conserved site JDM601_3315 41dfa97d289c8bd8d0a25f09357194aa 232 SUPERFAMILY SSF54768 52 119 6.28E-22 T 12-10-2018 JDM601_3315 41dfa97d289c8bd8d0a25f09357194aa 232 SUPERFAMILY SSF54211 122 201 3.03E-24 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold JDM601_3315 41dfa97d289c8bd8d0a25f09357194aa 232 Gene3D G3DSA:3.30.160.20 47 115 1.4E-28 T 12-10-2018 JDM601_3315 41dfa97d289c8bd8d0a25f09357194aa 232 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 52 206 1.8E-69 T 12-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 JDM601_3315 41dfa97d289c8bd8d0a25f09357194aa 232 Gene3D G3DSA:3.30.230.10 117 209 2.2E-35 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup JDM601_3315 41dfa97d289c8bd8d0a25f09357194aa 232 Pfam PF03719 Ribosomal protein S5, C-terminal domain 130 200 1.8E-28 T 12-10-2018 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 JDM601_3315 41dfa97d289c8bd8d0a25f09357194aa 232 Pfam PF00333 Ribosomal protein S5, N-terminal domain 56 118 4.0E-27 T 12-10-2018 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 JDM601_3881 ad7277830eb393ca9006291628d867e9 253 SUPERFAMILY SSF53474 9 252 1.63E-41 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_3881 ad7277830eb393ca9006291628d867e9 253 Gene3D G3DSA:3.40.50.1820 1 253 9.6E-42 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_3881 ad7277830eb393ca9006291628d867e9 253 Pfam PF12697 Alpha/beta hydrolase family 19 246 2.8E-18 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 JDM601_4061 9eaca82f6241b2638f9d8cb6825f7d52 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 6.4E-26 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JDM601_4061 9eaca82f6241b2638f9d8cb6825f7d52 305 Gene3D G3DSA:3.40.190.290 90 298 5.1E-58 T 12-10-2018 JDM601_4061 9eaca82f6241b2638f9d8cb6825f7d52 305 Gene3D G3DSA:1.10.10.10 1 84 9.1E-32 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JDM601_4061 9eaca82f6241b2638f9d8cb6825f7d52 305 Pfam PF03466 LysR substrate binding domain 88 289 1.8E-41 T 12-10-2018 IPR005119 LysR, substrate-binding JDM601_4061 9eaca82f6241b2638f9d8cb6825f7d52 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.4E-12 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JDM601_4061 9eaca82f6241b2638f9d8cb6825f7d52 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.4E-12 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JDM601_4061 9eaca82f6241b2638f9d8cb6825f7d52 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.4E-12 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JDM601_4061 9eaca82f6241b2638f9d8cb6825f7d52 305 SUPERFAMILY SSF53850 90 293 1.1E-41 T 12-10-2018 JDM601_4061 9eaca82f6241b2638f9d8cb6825f7d52 305 SUPERFAMILY SSF46785 1 86 4.05E-26 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JDM601_2925 e312e5a8ed80be3041ea2e3077aa367d 233 Gene3D G3DSA:1.20.1260.10 14 233 1.5E-71 T 12-10-2018 IPR012347 Ferritin-like JDM601_2925 e312e5a8ed80be3041ea2e3077aa367d 233 SUPERFAMILY SSF47240 24 139 5.04E-8 T 12-10-2018 IPR009078 Ferritin-like superfamily JDM601_2925 e312e5a8ed80be3041ea2e3077aa367d 233 Pfam PF13794 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE)-like 26 204 1.5E-60 T 12-10-2018 JDM601_2641 0fc996e6c5601014eaa1e43c3c602faf 429 SUPERFAMILY SSF53474 92 237 1.32E-7 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_2641 0fc996e6c5601014eaa1e43c3c602faf 429 Pfam PF08237 PE-PPE domain 92 296 2.6E-49 T 12-10-2018 IPR013228 PE-PPE, C-terminal JDM601_2641 0fc996e6c5601014eaa1e43c3c602faf 429 Gene3D G3DSA:3.40.50.1820 45 209 6.2E-6 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_1067 6cd066907dc6a21daaa801e9fb2b0d7d 170 Pfam PF02566 OsmC-like protein 61 164 2.1E-20 T 12-10-2018 IPR003718 OsmC/Ohr family JDM601_1067 6cd066907dc6a21daaa801e9fb2b0d7d 170 SUPERFAMILY SSF82784 9 168 4.71E-42 T 12-10-2018 IPR036102 OsmC/Ohr superfamily JDM601_1067 6cd066907dc6a21daaa801e9fb2b0d7d 170 Gene3D G3DSA:3.30.300.20 9 156 3.8E-43 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta JDM601_0444 eb9b1921303eaa952c84e763b4be1365 507 SUPERFAMILY SSF53720 13 499 2.23E-161 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 JDM601_0444 eb9b1921303eaa952c84e763b4be1365 507 Pfam PF00171 Aldehyde dehydrogenase family 28 494 1.2E-161 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 JDM601_0444 eb9b1921303eaa952c84e763b4be1365 507 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 262 269 - T 12-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 JDM601_0444 eb9b1921303eaa952c84e763b4be1365 507 Gene3D G3DSA:3.40.309.10 267 465 1.7E-162 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 JDM601_0444 eb9b1921303eaa952c84e763b4be1365 507 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 295 306 - T 12-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 JDM601_0444 eb9b1921303eaa952c84e763b4be1365 507 Gene3D G3DSA:3.40.605.10 24 493 1.7E-162 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 JDM601_1475 11d84d8d653578b1a20df2b1e09fa5e3 188 Pfam PF00857 Isochorismatase family 13 176 8.5E-23 T 12-10-2018 IPR000868 Isochorismatase-like GO:0003824 JDM601_1475 11d84d8d653578b1a20df2b1e09fa5e3 188 Gene3D G3DSA:3.40.50.850 4 184 1.3E-32 T 12-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 JDM601_1475 11d84d8d653578b1a20df2b1e09fa5e3 188 SUPERFAMILY SSF52499 10 184 1.96E-34 T 12-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 JDM601_2620 e8ef28963374dece0336aed98b97b371 186 SUPERFAMILY SSF46689 1 63 4.16E-10 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JDM601_2620 e8ef28963374dece0336aed98b97b371 186 Gene3D G3DSA:1.10.357.10 1 181 4.1E-24 T 12-10-2018 JDM601_2620 e8ef28963374dece0336aed98b97b371 186 Pfam PF00440 Bacterial regulatory proteins, tetR family 2 47 1.5E-6 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_1046 b82d26e77b0dc9dedaa060ca22d74491 472 Pfam PF02720 Domain of unknown function (DUF222) 6 311 6.0E-80 T 12-10-2018 IPR003870 Domain of unknown function DUF222 JDM601_1046 b82d26e77b0dc9dedaa060ca22d74491 472 SMART SM00507 302 354 8.3E-5 T 12-10-2018 IPR003615 HNH nuclease JDM601_2335 4f578680d146057fec4e156bb8f58f65 405 ProSitePatterns PS00787 Chorismate synthase signature 1. 8 23 - T 12-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 JDM601_2335 4f578680d146057fec4e156bb8f58f65 405 SUPERFAMILY SSF103263 2 391 8.9E-135 T 12-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 JDM601_2335 4f578680d146057fec4e156bb8f58f65 405 ProSitePatterns PS00788 Chorismate synthase signature 2. 136 152 - T 12-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 JDM601_2335 4f578680d146057fec4e156bb8f58f65 405 PIRSF PIRSF001456 1 392 1.5E-126 T 12-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 JDM601_2335 4f578680d146057fec4e156bb8f58f65 405 TIGRFAM TIGR00033 aroC: chorismate synthase 2 373 1.1E-123 T 12-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 JDM601_2335 4f578680d146057fec4e156bb8f58f65 405 Gene3D G3DSA:3.60.150.10 1 404 1.8E-164 T 12-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 JDM601_2335 4f578680d146057fec4e156bb8f58f65 405 Pfam PF01264 Chorismate synthase 2 369 1.2E-118 T 12-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 JDM601_2335 4f578680d146057fec4e156bb8f58f65 405 ProSitePatterns PS00789 Chorismate synthase signature 3. 343 359 - T 12-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 JDM601_2335 4f578680d146057fec4e156bb8f58f65 405 Hamap MF_00300 Chorismate synthase [aroC]. 2 376 34.299 T 12-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 JDM601_2840 663c22c38e188fa6f9bc998d9f9b69c0 167 Hamap MF_00023 SsrA-binding protein [smpB]. 1 165 70.975 T 12-10-2018 IPR000037 SsrA-binding protein GO:0003723 JDM601_2840 663c22c38e188fa6f9bc998d9f9b69c0 167 TIGRFAM TIGR00086 smpB: SsrA-binding protein 19 159 2.5E-59 T 12-10-2018 IPR000037 SsrA-binding protein GO:0003723 JDM601_2840 663c22c38e188fa6f9bc998d9f9b69c0 167 Gene3D G3DSA:2.40.280.10 11 139 6.4E-50 T 12-10-2018 IPR023620 Small protein B JDM601_2840 663c22c38e188fa6f9bc998d9f9b69c0 167 Pfam PF01668 SmpB protein 19 159 3.2E-60 T 12-10-2018 IPR000037 SsrA-binding protein GO:0003723 JDM601_2840 663c22c38e188fa6f9bc998d9f9b69c0 167 SUPERFAMILY SSF74982 13 142 1.18E-51 T 12-10-2018 IPR023620 Small protein B JDM601_2840 663c22c38e188fa6f9bc998d9f9b69c0 167 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 21 142 1.0E-57 T 12-10-2018 IPR000037 SsrA-binding protein GO:0003723 JDM601_2840 663c22c38e188fa6f9bc998d9f9b69c0 167 ProSitePatterns PS01317 SsrA-binding protein. 37 49 - T 12-10-2018 IPR020081 SsrA-binding protein, conserved site JDM601_4018 e9793b26f7b96f1aa34d8271ccbf004f 148 Gene3D G3DSA:2.60.40.2880 59 148 4.4E-36 T 12-10-2018 IPR038468 Transport accessory protein MmpS, soluble domain superfamily JDM601_4018 e9793b26f7b96f1aa34d8271ccbf004f 148 Pfam PF05423 Mycobacterium membrane protein 10 148 2.0E-67 T 12-10-2018 IPR008693 Transport accessory protein MmpS JDM601_3322 4d08d9206835515e42619764d82b26ba 122 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 122 1.0E-56 T 12-10-2018 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 JDM601_3322 4d08d9206835515e42619764d82b26ba 122 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 12-10-2018 IPR019972 Ribosomal protein L14P, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JDM601_3322 4d08d9206835515e42619764d82b26ba 122 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 122 25.615 T 12-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 JDM601_3322 4d08d9206835515e42619764d82b26ba 122 SMART SM01374 1 122 3.1E-84 T 12-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 JDM601_3322 4d08d9206835515e42619764d82b26ba 122 Gene3D G3DSA:2.40.150.20 1 122 3.9E-52 T 12-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 JDM601_3322 4d08d9206835515e42619764d82b26ba 122 SUPERFAMILY SSF50193 2 122 3.79E-49 T 12-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 JDM601_3322 4d08d9206835515e42619764d82b26ba 122 Pfam PF00238 Ribosomal protein L14p/L23e 2 122 1.2E-53 T 12-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 JDM601_1897 f63706b21ba0f3b0222528daa4b8defb 299 Pfam PF14011 EspG family 13 282 6.3E-44 T 12-10-2018 IPR025734 EspG family JDM601_2774 4e4691bc588de02861f6e7575bb646ae 358 Pfam PF01497 Periplasmic binding protein 92 331 1.1E-14 T 12-10-2018 IPR002491 ABC transporter periplasmic binding domain JDM601_2774 4e4691bc588de02861f6e7575bb646ae 358 Gene3D G3DSA:3.40.50.1980 182 354 1.0E-27 T 12-10-2018 JDM601_2774 4e4691bc588de02861f6e7575bb646ae 358 Gene3D G3DSA:3.40.50.1980 68 178 3.0E-22 T 12-10-2018 JDM601_2774 4e4691bc588de02861f6e7575bb646ae 358 SUPERFAMILY SSF53807 83 341 8.24E-40 T 12-10-2018 JDM601_2227 b4bf0ba5e38db080efef69f55324c942 382 ProSitePatterns PS01270 Band 7 protein family signature. 138 166 - T 12-10-2018 IPR018080 Band 7/stomatin-like, conserved site JDM601_2227 b4bf0ba5e38db080efef69f55324c942 382 Pfam PF01145 SPFH domain / Band 7 family 29 200 4.6E-31 T 12-10-2018 IPR001107 Band 7 domain JDM601_2227 b4bf0ba5e38db080efef69f55324c942 382 SMART SM00244 24 182 1.5E-55 T 12-10-2018 IPR001107 Band 7 domain JDM601_2227 b4bf0ba5e38db080efef69f55324c942 382 Gene3D G3DSA:3.30.479.30 52 184 1.3E-43 T 12-10-2018 JDM601_2227 b4bf0ba5e38db080efef69f55324c942 382 PRINTS PR00721 Stomatin signature 177 198 5.3E-33 T 12-10-2018 IPR001972 Stomatin family GO:0016020 JDM601_2227 b4bf0ba5e38db080efef69f55324c942 382 PRINTS PR00721 Stomatin signature 79 100 5.3E-33 T 12-10-2018 IPR001972 Stomatin family GO:0016020 JDM601_2227 b4bf0ba5e38db080efef69f55324c942 382 PRINTS PR00721 Stomatin signature 114 131 5.3E-33 T 12-10-2018 IPR001972 Stomatin family GO:0016020 JDM601_2227 b4bf0ba5e38db080efef69f55324c942 382 PRINTS PR00721 Stomatin signature 134 157 5.3E-33 T 12-10-2018 IPR001972 Stomatin family GO:0016020 JDM601_2227 b4bf0ba5e38db080efef69f55324c942 382 PRINTS PR00721 Stomatin signature 31 53 5.3E-33 T 12-10-2018 IPR001972 Stomatin family GO:0016020 JDM601_2227 b4bf0ba5e38db080efef69f55324c942 382 PRINTS PR00721 Stomatin signature 158 176 5.3E-33 T 12-10-2018 IPR001972 Stomatin family GO:0016020 JDM601_2227 b4bf0ba5e38db080efef69f55324c942 382 SUPERFAMILY SSF117892 55 189 6.28E-40 T 12-10-2018 IPR036013 Band 7/SPFH domain superfamily JDM601_2433 54bdb19f1b0d6ab837bdfadbd8e145ae 213 Pfam PF02254 TrkA-N domain 1 106 1.9E-19 T 12-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 JDM601_2433 54bdb19f1b0d6ab837bdfadbd8e145ae 213 SUPERFAMILY SSF116726 130 200 8.37E-7 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 JDM601_2433 54bdb19f1b0d6ab837bdfadbd8e145ae 213 Gene3D G3DSA:3.40.50.720 1 124 1.9E-23 T 12-10-2018 JDM601_2433 54bdb19f1b0d6ab837bdfadbd8e145ae 213 SUPERFAMILY SSF51735 1 121 8.17E-21 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_2433 54bdb19f1b0d6ab837bdfadbd8e145ae 213 Pfam PF02080 TrkA-C domain 139 201 6.5E-8 T 12-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 JDM601_2433 54bdb19f1b0d6ab837bdfadbd8e145ae 213 Gene3D G3DSA:3.30.70.1450 132 204 2.4E-7 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 JDM601_2531 e7a2e8745909843b4f7ba3dacb6d7a2a 99 Pfam PF00934 PE family 2 93 9.3E-30 T 12-10-2018 IPR000084 PE-PGRS family, N-terminal JDM601_2531 e7a2e8745909843b4f7ba3dacb6d7a2a 99 SUPERFAMILY SSF140459 8 84 2.07E-21 T 12-10-2018 JDM601_2531 e7a2e8745909843b4f7ba3dacb6d7a2a 99 Gene3D G3DSA:1.10.287.850 1 98 8.6E-31 T 12-10-2018 JDM601_0724 2cf181a1f653fb4d3d816dd409025df9 257 Gene3D G3DSA:3.40.50.720 1 249 1.1E-75 T 12-10-2018 JDM601_0724 2cf181a1f653fb4d3d816dd409025df9 257 SUPERFAMILY SSF51735 2 240 3.66E-76 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_0724 2cf181a1f653fb4d3d816dd409025df9 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 76 87 2.5E-9 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0724 2cf181a1f653fb4d3d816dd409025df9 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 127 135 2.5E-9 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0724 2cf181a1f653fb4d3d816dd409025df9 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 147 166 2.5E-9 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0724 2cf181a1f653fb4d3d816dd409025df9 257 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 8 240 7.4E-59 T 12-10-2018 JDM601_0724 2cf181a1f653fb4d3d816dd409025df9 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 147 166 1.5E-34 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0724 2cf181a1f653fb4d3d816dd409025df9 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 76 87 1.5E-34 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0724 2cf181a1f653fb4d3d816dd409025df9 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 203 223 1.5E-34 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0724 2cf181a1f653fb4d3d816dd409025df9 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 1.5E-34 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0724 2cf181a1f653fb4d3d816dd409025df9 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 168 185 1.5E-34 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0724 2cf181a1f653fb4d3d816dd409025df9 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 121 137 1.5E-34 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0724 2cf181a1f653fb4d3d816dd409025df9 257 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 134 162 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 JDM601_2798 02397e3fce1b93a034ab7f7aada1cc0d 252 Pfam PF00106 short chain dehydrogenase 6 201 1.0E-40 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2798 02397e3fce1b93a034ab7f7aada1cc0d 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 3.8E-24 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2798 02397e3fce1b93a034ab7f7aada1cc0d 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 3.8E-24 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2798 02397e3fce1b93a034ab7f7aada1cc0d 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 3.8E-24 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2798 02397e3fce1b93a034ab7f7aada1cc0d 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 213 233 3.8E-24 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2798 02397e3fce1b93a034ab7f7aada1cc0d 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 3.8E-24 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2798 02397e3fce1b93a034ab7f7aada1cc0d 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 76 87 3.8E-24 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2798 02397e3fce1b93a034ab7f7aada1cc0d 252 Gene3D G3DSA:3.40.50.720 1 250 8.0E-64 T 12-10-2018 JDM601_2798 02397e3fce1b93a034ab7f7aada1cc0d 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 76 87 1.7E-6 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2798 02397e3fce1b93a034ab7f7aada1cc0d 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 1.7E-6 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2798 02397e3fce1b93a034ab7f7aada1cc0d 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 1.7E-6 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2798 02397e3fce1b93a034ab7f7aada1cc0d 252 SUPERFAMILY SSF51735 5 248 6.98E-56 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_2798 02397e3fce1b93a034ab7f7aada1cc0d 252 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 145 173 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 JDM601_1340 6b60cd1aff9f03efc67fbb372fada01e 191 Gene3D G3DSA:1.20.1540.10 1 184 4.6E-15 T 12-10-2018 IPR035952 Rhomboid-like superfamily JDM601_1340 6b60cd1aff9f03efc67fbb372fada01e 191 Pfam PF01694 Rhomboid family 30 177 2.5E-25 T 12-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 JDM601_1340 6b60cd1aff9f03efc67fbb372fada01e 191 SUPERFAMILY SSF144091 3 178 1.16E-26 T 12-10-2018 JDM601_0365 8acd70b96e9680b6440e597eefd1909b 118 Pfam PF13564 DoxX-like family 13 109 4.0E-13 T 12-10-2018 IPR032808 DoxX family JDM601_0714 91fb7be815c2b7c577cdc96df9013f41 314 TIGRFAM TIGR03564 F420_MSMEG_4879: F420-dependent oxidoreductase, MSMEG_4879 family 17 282 7.7E-104 T 12-10-2018 IPR019910 Luciferase-like, F420-dependent oxidoreductase, MSMEG4879, predicted JDM601_0714 91fb7be815c2b7c577cdc96df9013f41 314 Pfam PF00296 Luciferase-like monooxygenase 13 279 1.8E-54 T 12-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 JDM601_0714 91fb7be815c2b7c577cdc96df9013f41 314 Gene3D G3DSA:3.20.20.30 7 303 5.1E-54 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 JDM601_0714 91fb7be815c2b7c577cdc96df9013f41 314 SUPERFAMILY SSF51679 9 288 1.3E-52 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 JDM601_4257 ca1a140a04a53fddd9fbbe39301f2ddd 262 Pfam PF00106 short chain dehydrogenase 25 184 1.2E-28 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_4257 ca1a140a04a53fddd9fbbe39301f2ddd 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 112 128 4.7E-15 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_4257 ca1a140a04a53fddd9fbbe39301f2ddd 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 168 185 4.7E-15 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_4257 ca1a140a04a53fddd9fbbe39301f2ddd 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 65 76 4.7E-15 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_4257 ca1a140a04a53fddd9fbbe39301f2ddd 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 147 166 4.7E-15 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_4257 ca1a140a04a53fddd9fbbe39301f2ddd 262 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 65 76 1.9E-10 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_4257 ca1a140a04a53fddd9fbbe39301f2ddd 262 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 147 166 1.9E-10 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_4257 ca1a140a04a53fddd9fbbe39301f2ddd 262 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 118 126 1.9E-10 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_4257 ca1a140a04a53fddd9fbbe39301f2ddd 262 SUPERFAMILY SSF51735 24 222 4.76E-42 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_4257 ca1a140a04a53fddd9fbbe39301f2ddd 262 Gene3D G3DSA:3.40.50.720 1 233 4.4E-44 T 12-10-2018 JDM601_2669 702868b2f22da2db1146fdf849a1f486 157 Gene3D G3DSA:3.40.50.150 1 156 3.7E-43 T 12-10-2018 JDM601_2669 702868b2f22da2db1146fdf849a1f486 157 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 89 95 - T 12-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 JDM601_2669 702868b2f22da2db1146fdf849a1f486 157 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 1 155 1.2E-40 T 12-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 JDM601_2669 702868b2f22da2db1146fdf849a1f486 157 PIRSF PIRSF004553 1 157 3.3E-46 T 12-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 JDM601_2669 702868b2f22da2db1146fdf849a1f486 157 SUPERFAMILY SSF53335 1 151 2.04E-30 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JDM601_2669 702868b2f22da2db1146fdf849a1f486 157 Pfam PF03602 Conserved hypothetical protein 95 1 153 7.6E-35 T 12-10-2018 JDM601_4301 6ca99d15da6e26afef5eade39f35ae44 342 Gene3D G3DSA:3.40.50.300 7 205 2.2E-43 T 12-10-2018 JDM601_4301 6ca99d15da6e26afef5eade39f35ae44 342 SMART SM00833 235 319 4.1E-11 T 12-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal JDM601_4301 6ca99d15da6e26afef5eade39f35ae44 342 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 10 188 4.7E-37 T 12-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain JDM601_4301 6ca99d15da6e26afef5eade39f35ae44 342 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 236 319 5.7E-12 T 12-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal JDM601_4301 6ca99d15da6e26afef5eade39f35ae44 342 SUPERFAMILY SSF52540 8 219 1.43E-24 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_4301 6ca99d15da6e26afef5eade39f35ae44 342 SUPERFAMILY SSF90002 236 317 1.1E-7 T 12-10-2018 JDM601_2648 c993a1a6b3643e750d30489e540615e9 1197 SUPERFAMILY SSF52540 2 1180 8.56E-70 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_2648 c993a1a6b3643e750d30489e540615e9 1197 Gene3D G3DSA:3.40.50.300 1 348 7.2E-53 T 12-10-2018 JDM601_2648 c993a1a6b3643e750d30489e540615e9 1197 Gene3D G3DSA:3.40.50.300 1035 1193 3.9E-43 T 12-10-2018 JDM601_2648 c993a1a6b3643e750d30489e540615e9 1197 Gene3D G3DSA:1.20.5.340 393 491 1.4E-5 T 12-10-2018 JDM601_2648 c993a1a6b3643e750d30489e540615e9 1197 PIRSF PIRSF005719 1 1193 3.6E-269 T 12-10-2018 IPR024704 Structural maintenance of chromosomes protein JDM601_2648 c993a1a6b3643e750d30489e540615e9 1197 Gene3D G3DSA:1.20.1060.20 504 658 1.1E-23 T 12-10-2018 JDM601_2648 c993a1a6b3643e750d30489e540615e9 1197 Pfam PF06470 SMC proteins Flexible Hinge Domain 510 624 1.2E-20 T 12-10-2018 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 JDM601_2648 c993a1a6b3643e750d30489e540615e9 1197 SMART SM00968 510 624 2.0E-20 T 12-10-2018 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 JDM601_2648 c993a1a6b3643e750d30489e540615e9 1197 Gene3D G3DSA:3.30.70.1620 570 651 1.1E-23 T 12-10-2018 JDM601_2648 c993a1a6b3643e750d30489e540615e9 1197 TIGRFAM TIGR02168 SMC_prok_B: chromosome segregation protein SMC 3 1186 0.0 T 12-10-2018 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 JDM601_2648 c993a1a6b3643e750d30489e540615e9 1197 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 1179 8.9E-73 T 12-10-2018 IPR003395 RecF/RecN/SMC, N-terminal JDM601_2648 c993a1a6b3643e750d30489e540615e9 1197 SUPERFAMILY SSF75553 464 669 4.45E-29 T 12-10-2018 IPR036277 SMCs flexible hinge superfamily GO:0005515|GO:0005524|GO:0005694|GO:0051276 JDM601_2648 c993a1a6b3643e750d30489e540615e9 1197 Hamap MF_01894 Chromosome partition protein Smc [smc]. 1 1189 22.405 T 12-10-2018 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 JDM601_3506 fb80dd248a261624f5db80708e1f5039 140 Pfam PF13577 SnoaL-like domain 5 116 5.0E-14 T 12-10-2018 IPR037401 SnoaL-like domain JDM601_3506 fb80dd248a261624f5db80708e1f5039 140 SUPERFAMILY SSF54427 4 133 9.22E-25 T 12-10-2018 IPR032710 NTF2-like domain superfamily JDM601_3506 fb80dd248a261624f5db80708e1f5039 140 Gene3D G3DSA:3.10.450.50 2 128 2.0E-21 T 12-10-2018 JDM601_2955 a2b6c482a98078ce25f5e47e29259b71 477 SUPERFAMILY SSF140459 2 173 6.28E-63 T 12-10-2018 JDM601_2955 a2b6c482a98078ce25f5e47e29259b71 477 Gene3D G3DSA:1.20.1260.20 1 173 2.3E-68 T 12-10-2018 IPR038332 PPE superfamily JDM601_2955 a2b6c482a98078ce25f5e47e29259b71 477 Pfam PF00823 PPE family 6 160 2.1E-60 T 12-10-2018 IPR000030 PPE family JDM601_1203 11be1a084ec960e954ddbf267f0bf07a 323 Gene3D G3DSA:3.20.20.60 1 316 7.5E-90 T 12-10-2018 JDM601_1203 11be1a084ec960e954ddbf267f0bf07a 323 SUPERFAMILY SSF51621 5 254 6.28E-62 T 12-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 JDM601_1203 11be1a084ec960e954ddbf267f0bf07a 323 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 9 243 1.0E-46 T 12-10-2018 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 JDM601_1203 11be1a084ec960e954ddbf267f0bf07a 323 PIRSF PIRSF015582 1 319 3.0E-78 T 12-10-2018 IPR011206 Citrate lyase beta subunit-like JDM601_1192 b93d922ade928bc4b111e7aee034edd2 301 Gene3D G3DSA:3.40.50.300 3 237 3.7E-55 T 12-10-2018 JDM601_1192 b93d922ade928bc4b111e7aee034edd2 301 SMART SM00382 34 220 1.5E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain JDM601_1192 b93d922ade928bc4b111e7aee034edd2 301 SUPERFAMILY SSF52540 8 224 1.52E-52 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_1192 b93d922ade928bc4b111e7aee034edd2 301 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JDM601_1192 b93d922ade928bc4b111e7aee034edd2 301 Pfam PF00005 ABC transporter 25 163 2.4E-24 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JDM601_3980 76f9b7f7ee4b57a6a808de61eb2c6aaa 332 TIGRFAM TIGR04343 egtE_PLP_lyase: ergothioneine biosynthesis PLP-dependent enzyme EgtE 1 326 9.6E-136 T 12-10-2018 IPR027563 Pyridoxal-phosphate-dependent protein EgtE JDM601_3980 76f9b7f7ee4b57a6a808de61eb2c6aaa 332 Gene3D G3DSA:3.90.1150.10 219 327 9.6E-6 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 JDM601_3980 76f9b7f7ee4b57a6a808de61eb2c6aaa 332 SUPERFAMILY SSF53383 16 328 1.67E-48 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase JDM601_3980 76f9b7f7ee4b57a6a808de61eb2c6aaa 332 Pfam PF00266 Aminotransferase class-V 10 319 1.3E-22 T 12-10-2018 IPR000192 Aminotransferase class V domain JDM601_3980 76f9b7f7ee4b57a6a808de61eb2c6aaa 332 Gene3D G3DSA:3.40.640.10 13 217 2.0E-31 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 JDM601_2167 e796f974542e78240da02970ad814d30 710 SMART SM00642 166 576 3.5E-7 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 JDM601_2167 e796f974542e78240da02970ad814d30 710 TIGRFAM TIGR02100 glgX_debranch: glycogen debranching enzyme GlgX 12 706 9.1E-296 T 12-10-2018 IPR011837 Glycogen debranching enzyme, GlgX type GO:0004133|GO:0004553|GO:0005980 JDM601_2167 e796f974542e78240da02970ad814d30 710 SUPERFAMILY SSF81296 11 155 1.54E-40 T 12-10-2018 IPR014756 Immunoglobulin E-set JDM601_2167 e796f974542e78240da02970ad814d30 710 Pfam PF00128 Alpha amylase, catalytic domain 319 538 9.9E-5 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 JDM601_2167 e796f974542e78240da02970ad814d30 710 Pfam PF00128 Alpha amylase, catalytic domain 196 285 4.4E-7 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 JDM601_2167 e796f974542e78240da02970ad814d30 710 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 16 103 2.5E-17 T 12-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 JDM601_2167 e796f974542e78240da02970ad814d30 710 SUPERFAMILY SSF51011 598 707 3.96E-25 T 12-10-2018 JDM601_2167 e796f974542e78240da02970ad814d30 710 Gene3D G3DSA:3.20.20.80 146 590 8.1E-182 T 12-10-2018 JDM601_2167 e796f974542e78240da02970ad814d30 710 SUPERFAMILY SSF51445 141 584 1.12E-132 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily JDM601_2167 e796f974542e78240da02970ad814d30 710 Gene3D G3DSA:2.60.40.1180 597 708 3.8E-18 T 12-10-2018 IPR013780 Glycosyl hydrolase, all-beta JDM601_2167 e796f974542e78240da02970ad814d30 710 Gene3D G3DSA:2.60.40.10 4 144 3.9E-42 T 12-10-2018 IPR013783 Immunoglobulin-like fold JDM601_1319 4707e1cc9684bb5bcad2f17ed52f05cc 163 Gene3D G3DSA:1.10.10.10 71 156 4.3E-38 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JDM601_1319 4707e1cc9684bb5bcad2f17ed52f05cc 163 Pfam PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain 1 66 6.2E-6 T 12-10-2018 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 Reactome: R-HSA-5657655 JDM601_1319 4707e1cc9684bb5bcad2f17ed52f05cc 163 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 124 130 - T 12-10-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 JDM601_1319 4707e1cc9684bb5bcad2f17ed52f05cc 163 SUPERFAMILY SSF53155 3 79 3.73E-17 T 12-10-2018 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily GO:0003908|GO:0006281 Reactome: R-HSA-5657655 JDM601_1319 4707e1cc9684bb5bcad2f17ed52f05cc 163 Gene3D G3DSA:3.30.160.70 1 69 5.8E-19 T 12-10-2018 JDM601_1319 4707e1cc9684bb5bcad2f17ed52f05cc 163 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 75 154 7.9E-34 T 12-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 JDM601_1319 4707e1cc9684bb5bcad2f17ed52f05cc 163 SUPERFAMILY SSF46767 73 154 1.44E-33 T 12-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 JDM601_1319 4707e1cc9684bb5bcad2f17ed52f05cc 163 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 74 153 5.4E-37 T 12-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 JDM601_1319 4707e1cc9684bb5bcad2f17ed52f05cc 163 Hamap MF_00772 Methylated-DNA--protein-cysteine methyltransferase [ogt]. 6 154 43.05 T 12-10-2018 IPR023546 Methylated-DNA--protein-cysteine methyltransferase GO:0003824|GO:0006281 JDM601_1831 d4a28f5636ea87647402b40264b8efc6 398 Gene3D G3DSA:3.10.20.340 273 398 6.5E-40 T 12-10-2018 JDM601_1831 d4a28f5636ea87647402b40264b8efc6 398 Hamap MF_01106 Arginine biosynthesis bifunctional protein ArgJ [argJ]. 1 398 131.541 T 12-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 JDM601_1831 d4a28f5636ea87647402b40264b8efc6 398 Pfam PF01960 ArgJ family 18 398 1.5E-125 T 12-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 JDM601_1831 d4a28f5636ea87647402b40264b8efc6 398 TIGRFAM TIGR00120 ArgJ: glutamate N-acetyltransferase/amino-acid acetyltransferase 8 397 5.6E-108 T 12-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 JDM601_1831 d4a28f5636ea87647402b40264b8efc6 398 Gene3D G3DSA:3.60.70.12 1 193 5.8E-75 T 12-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 JDM601_1831 d4a28f5636ea87647402b40264b8efc6 398 Gene3D G3DSA:3.30.2330.10 194 272 3.8E-25 T 12-10-2018 JDM601_1831 d4a28f5636ea87647402b40264b8efc6 398 SUPERFAMILY SSF56266 13 394 1.83E-119 T 12-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 JDM601_1831 d4a28f5636ea87647402b40264b8efc6 398 ProDom PD004193 ACETYLTRANSFERASE ORNITHINE ARGININE BIOSYNTHESIS ARGJ GLUTAMATE N-ACETYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIFUNCTIONAL 32 396 6.0E-133 T 12-10-2018 JDM601_2865 28405aa21dff0b330ff5a53ac39fa6c7 791 SUPERFAMILY SSF54292 1 73 1.67E-18 T 12-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 JDM601_2865 28405aa21dff0b330ff5a53ac39fa6c7 791 Gene3D G3DSA:3.40.228.10 348 439 7.4E-19 T 12-10-2018 JDM601_2865 28405aa21dff0b330ff5a53ac39fa6c7 791 Pfam PF00384 Molybdopterin oxidoreductase 274 418 2.3E-11 T 12-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 JDM601_2865 28405aa21dff0b330ff5a53ac39fa6c7 791 Pfam PF00384 Molybdopterin oxidoreductase 530 642 2.3E-7 T 12-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 JDM601_2865 28405aa21dff0b330ff5a53ac39fa6c7 791 ProSitePatterns PS00642 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 2. 99 111 - T 12-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 JDM601_2865 28405aa21dff0b330ff5a53ac39fa6c7 791 Gene3D G3DSA:3.30.70.20 131 205 1.1E-8 T 12-10-2018 JDM601_2865 28405aa21dff0b330ff5a53ac39fa6c7 791 SUPERFAMILY SSF54862 77 213 4.02E-32 T 12-10-2018 JDM601_2865 28405aa21dff0b330ff5a53ac39fa6c7 791 Gene3D G3DSA:3.40.50.740 478 674 2.9E-29 T 12-10-2018 JDM601_2865 28405aa21dff0b330ff5a53ac39fa6c7 791 ProSitePatterns PS00641 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 1. 30 47 - T 12-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 JDM601_2865 28405aa21dff0b330ff5a53ac39fa6c7 791 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 1 75 9.9E-20 T 12-10-2018 JDM601_2865 28405aa21dff0b330ff5a53ac39fa6c7 791 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 86 123 3.3E-16 T 12-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 JDM601_2865 28405aa21dff0b330ff5a53ac39fa6c7 791 TIGRFAM TIGR01973 NuoG: NADH dehydrogenase (quinone), G subunit 4 642 1.7E-167 T 12-10-2018 IPR010228 NADH:ubiquinone oxidoreductase, subunit G GO:0016651|GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 JDM601_2865 28405aa21dff0b330ff5a53ac39fa6c7 791 Pfam PF01568 Molydopterin dinucleotide binding domain 710 770 2.4E-7 T 12-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 JDM601_2865 28405aa21dff0b330ff5a53ac39fa6c7 791 ProSitePatterns PS00643 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 3. 147 157 - T 12-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 JDM601_2865 28405aa21dff0b330ff5a53ac39fa6c7 791 Gene3D G3DSA:3.10.20.740 1 124 1.3E-35 T 12-10-2018 JDM601_2865 28405aa21dff0b330ff5a53ac39fa6c7 791 Gene3D G3DSA:3.40.50.740 279 347 7.4E-19 T 12-10-2018 JDM601_2865 28405aa21dff0b330ff5a53ac39fa6c7 791 SUPERFAMILY SSF53706 221 674 4.5E-78 T 12-10-2018 JDM601_2865 28405aa21dff0b330ff5a53ac39fa6c7 791 SMART SM00929 84 124 4.9E-19 T 12-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 JDM601_2865 28405aa21dff0b330ff5a53ac39fa6c7 791 SUPERFAMILY SSF50692 692 769 1.01E-8 T 12-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily JDM601_2865 28405aa21dff0b330ff5a53ac39fa6c7 791 SMART SM00926 217 271 7.6E-4 T 12-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 JDM601_2865 28405aa21dff0b330ff5a53ac39fa6c7 791 Gene3D G3DSA:2.20.25.90 219 270 3.1E-9 T 12-10-2018 JDM601_2865 28405aa21dff0b330ff5a53ac39fa6c7 791 Gene3D G3DSA:2.40.40.20 696 783 4.1E-5 T 12-10-2018 JDM601_2804 d583763ddc62a12780c7b3d8a7dd40cb 300 Gene3D G3DSA:3.60.15.10 1 297 2.8E-65 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like JDM601_2804 d583763ddc62a12780c7b3d8a7dd40cb 300 SUPERFAMILY SSF56281 5 291 1.21E-31 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like JDM601_2804 d583763ddc62a12780c7b3d8a7dd40cb 300 SMART SM00849 52 272 3.6E-12 T 12-10-2018 IPR001279 Metallo-beta-lactamase JDM601_2804 d583763ddc62a12780c7b3d8a7dd40cb 300 Pfam PF00753 Metallo-beta-lactamase superfamily 54 272 2.7E-14 T 12-10-2018 IPR001279 Metallo-beta-lactamase JDM601_1025 23d7b302bdd96167278914d80c1aa4cb 381 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 193 207 - T 12-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 JDM601_1025 23d7b302bdd96167278914d80c1aa4cb 381 Gene3D G3DSA:3.40.640.10 4 251 7.4E-98 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 JDM601_1025 23d7b302bdd96167278914d80c1aa4cb 381 PIRSF PIRSF001434 4 381 3.2E-139 T 12-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 JDM601_1025 23d7b302bdd96167278914d80c1aa4cb 381 SUPERFAMILY SSF53383 10 381 5.91E-118 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase JDM601_1025 23d7b302bdd96167278914d80c1aa4cb 381 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 8 380 1.9E-143 T 12-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 JDM601_1025 23d7b302bdd96167278914d80c1aa4cb 381 Gene3D G3DSA:3.90.1150.10 252 381 3.1E-54 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 JDM601_3051 a0247ea57722f6d2aaca0abb98be7961 229 SUPERFAMILY SSF56784 6 214 1.49E-46 T 12-10-2018 IPR036412 HAD-like superfamily JDM601_3051 a0247ea57722f6d2aaca0abb98be7961 229 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 6 184 2.3E-9 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 JDM601_3051 a0247ea57722f6d2aaca0abb98be7961 229 Gene3D G3DSA:1.10.150.240 22 79 1.7E-20 T 12-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 JDM601_3051 a0247ea57722f6d2aaca0abb98be7961 229 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 184 6.0E-26 T 12-10-2018 JDM601_3051 a0247ea57722f6d2aaca0abb98be7961 229 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 4 15 1.5E-5 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 JDM601_3051 a0247ea57722f6d2aaca0abb98be7961 229 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 128 144 1.5E-5 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 JDM601_3051 a0247ea57722f6d2aaca0abb98be7961 229 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 146 166 1.5E-5 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 JDM601_3708 6c734978d998159f7f54d2c5907959b8 305 Pfam PF04480 Protein of unknown function (DUF559) 217 263 7.6E-5 T 12-10-2018 IPR007569 Protein of unknown function DUF559 JDM601_3708 6c734978d998159f7f54d2c5907959b8 305 Gene3D G3DSA:3.40.960.10 194 283 3.4E-10 T 12-10-2018 JDM601_3708 6c734978d998159f7f54d2c5907959b8 305 SUPERFAMILY SSF52980 179 278 6.43E-6 T 12-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 JDM601_0079 024141b2acbe5fa72f7a88b3720a7600 449 PRINTS PR00463 E-class P450 group I signature 160 178 8.3E-23 T 12-10-2018 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_0079 024141b2acbe5fa72f7a88b3720a7600 449 PRINTS PR00463 E-class P450 group I signature 353 377 8.3E-23 T 12-10-2018 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_0079 024141b2acbe5fa72f7a88b3720a7600 449 PRINTS PR00463 E-class P450 group I signature 385 395 8.3E-23 T 12-10-2018 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_0079 024141b2acbe5fa72f7a88b3720a7600 449 PRINTS PR00463 E-class P450 group I signature 282 308 8.3E-23 T 12-10-2018 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_0079 024141b2acbe5fa72f7a88b3720a7600 449 PRINTS PR00463 E-class P450 group I signature 312 330 8.3E-23 T 12-10-2018 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_0079 024141b2acbe5fa72f7a88b3720a7600 449 PRINTS PR00463 E-class P450 group I signature 50 69 8.3E-23 T 12-10-2018 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_0079 024141b2acbe5fa72f7a88b3720a7600 449 PRINTS PR00463 E-class P450 group I signature 395 418 8.3E-23 T 12-10-2018 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_0079 024141b2acbe5fa72f7a88b3720a7600 449 PRINTS PR00463 E-class P450 group I signature 262 279 8.3E-23 T 12-10-2018 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_0079 024141b2acbe5fa72f7a88b3720a7600 449 Pfam PF00067 Cytochrome P450 25 439 1.0E-59 T 12-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_0079 024141b2acbe5fa72f7a88b3720a7600 449 Gene3D G3DSA:1.10.630.10 25 448 3.6E-86 T 12-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_0079 024141b2acbe5fa72f7a88b3720a7600 449 PRINTS PR00385 P450 superfamily signature 395 406 1.2E-10 T 12-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_0079 024141b2acbe5fa72f7a88b3720a7600 449 PRINTS PR00385 P450 superfamily signature 273 290 1.2E-10 T 12-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_0079 024141b2acbe5fa72f7a88b3720a7600 449 PRINTS PR00385 P450 superfamily signature 313 324 1.2E-10 T 12-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_0079 024141b2acbe5fa72f7a88b3720a7600 449 PRINTS PR00385 P450 superfamily signature 386 395 1.2E-10 T 12-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_0079 024141b2acbe5fa72f7a88b3720a7600 449 SUPERFAMILY SSF48264 23 448 8.12E-83 T 12-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_0107 35bfca1a4a60d54760cf75a228e28644 231 Pfam PF04248 Domain of unknown function (DUF427) 123 212 2.2E-27 T 12-10-2018 IPR007361 Domain of unknown function DUF427 JDM601_0107 35bfca1a4a60d54760cf75a228e28644 231 Gene3D G3DSA:2.170.150.40 108 217 2.4E-30 T 12-10-2018 JDM601_0798 0a88e0751b18c135ba85ab7c664ef41c 136 SUPERFAMILY SSF50249 2 68 3.92E-17 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold JDM601_0798 0a88e0751b18c135ba85ab7c664ef41c 136 Pfam PF00313 'Cold-shock' DNA-binding domain 3 64 1.6E-16 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 JDM601_0798 0a88e0751b18c135ba85ab7c664ef41c 136 PRINTS PR00050 Cold shock protein signature 24 33 1.8E-11 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 JDM601_0798 0a88e0751b18c135ba85ab7c664ef41c 136 PRINTS PR00050 Cold shock protein signature 38 56 1.8E-11 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 JDM601_0798 0a88e0751b18c135ba85ab7c664ef41c 136 PRINTS PR00050 Cold shock protein signature 4 19 1.8E-11 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 JDM601_0798 0a88e0751b18c135ba85ab7c664ef41c 136 SMART SM00357 3 65 1.9E-22 T 12-10-2018 IPR011129 Cold shock domain GO:0003676 JDM601_0798 0a88e0751b18c135ba85ab7c664ef41c 136 Gene3D G3DSA:2.40.50.140 2 63 3.8E-19 T 12-10-2018 JDM601_3282 faa0183f2b64a0e8dcc93935251b15ac 136 Pfam PF00411 Ribosomal protein S11 26 135 1.2E-49 T 12-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 JDM601_3282 faa0183f2b64a0e8dcc93935251b15ac 136 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 10 136 34.388 T 12-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 JDM601_3282 faa0183f2b64a0e8dcc93935251b15ac 136 Gene3D G3DSA:3.30.420.80 9 136 1.1E-55 T 12-10-2018 IPR036967 Ribosomal protein S11 superfamily GO:0003735|GO:0005840|GO:0006412 JDM601_3282 faa0183f2b64a0e8dcc93935251b15ac 136 ProSitePatterns PS00054 Ribosomal protein S11 signature. 104 126 - T 12-10-2018 IPR018102 Ribosomal S11, conserved site JDM601_3282 faa0183f2b64a0e8dcc93935251b15ac 136 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 17 133 4.8E-59 T 12-10-2018 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 JDM601_3282 faa0183f2b64a0e8dcc93935251b15ac 136 SUPERFAMILY SSF53137 21 136 1.12E-50 T 12-10-2018 JDM601_3282 faa0183f2b64a0e8dcc93935251b15ac 136 PIRSF PIRSF002131 4 136 2.4E-55 T 12-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 JDM601_2153 cbd227d8e64a47c69bed8e57318bd5ad 230 SUPERFAMILY SSF55811 19 138 9.21E-26 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 JDM601_2153 cbd227d8e64a47c69bed8e57318bd5ad 230 Gene3D G3DSA:3.90.79.10 3 140 8.8E-28 T 12-10-2018 JDM601_2153 cbd227d8e64a47c69bed8e57318bd5ad 230 Pfam PF00293 NUDIX domain 23 128 4.0E-9 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 JDM601_2153 cbd227d8e64a47c69bed8e57318bd5ad 230 Gene3D G3DSA:1.10.10.10 141 219 2.2E-18 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JDM601_2153 cbd227d8e64a47c69bed8e57318bd5ad 230 SUPERFAMILY SSF46785 142 214 1.39E-12 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JDM601_2412 e39eb1a069a13701c02bd29b019b0529 255 Gene3D G3DSA:3.90.640.20 155 255 5.1E-29 T 12-10-2018 IPR037126 PdaC/RsiV-like superfamily JDM601_2412 e39eb1a069a13701c02bd29b019b0529 255 Gene3D G3DSA:3.30.565.40 26 143 2.2E-45 T 12-10-2018 JDM601_2412 e39eb1a069a13701c02bd29b019b0529 255 Pfam PF11738 Protein of unknown function (DUF3298) 157 248 2.1E-14 T 12-10-2018 IPR021729 Domain of unknown function DUF3298 JDM601_1668 199cb2fdbed3413c422c801bdb7bfad4 194 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 77 111 6.5E-4 T 12-10-2018 IPR001451 Hexapeptide repeat JDM601_1668 199cb2fdbed3413c422c801bdb7bfad4 194 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 120 155 2.5E-8 T 12-10-2018 IPR001451 Hexapeptide repeat JDM601_1668 199cb2fdbed3413c422c801bdb7bfad4 194 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 7 168 7.5E-69 T 12-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 JDM601_1668 199cb2fdbed3413c422c801bdb7bfad4 194 Gene3D G3DSA:2.160.10.10 70 185 5.2E-38 T 12-10-2018 JDM601_1668 199cb2fdbed3413c422c801bdb7bfad4 194 Gene3D G3DSA:1.10.3130.10 1 69 6.7E-17 T 12-10-2018 JDM601_1668 199cb2fdbed3413c422c801bdb7bfad4 194 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 129 157 - T 12-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 JDM601_1668 199cb2fdbed3413c422c801bdb7bfad4 194 SUPERFAMILY SSF51161 5 170 1.32E-52 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily JDM601_1668 199cb2fdbed3413c422c801bdb7bfad4 194 PIRSF PIRSF000441 1 188 1.3E-77 T 12-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 JDM601_1948 381b5acb3d48855469ae3f39c5768992 313 Pfam PF07174 Fibronectin-attachment protein (FAP) 50 268 4.0E-95 T 12-10-2018 IPR010801 Fibronectin-attachment GO:0005576|GO:0050840 JDM601_2882 d40777e6e5c0015757d05ff668590c5e 304 Pfam PF12697 Alpha/beta hydrolase family 24 280 7.5E-19 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 JDM601_2882 d40777e6e5c0015757d05ff668590c5e 304 Gene3D G3DSA:3.40.50.1820 2 287 2.3E-49 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_2882 d40777e6e5c0015757d05ff668590c5e 304 SUPERFAMILY SSF53474 5 285 1.01E-46 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_0633 eb00c27275e79f9b06e2827c4da89062 424 Gene3D G3DSA:1.10.630.10 2 423 1.4E-96 T 12-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_0633 eb00c27275e79f9b06e2827c4da89062 424 Pfam PF00067 Cytochrome P450 7 400 1.1E-62 T 12-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_0633 eb00c27275e79f9b06e2827c4da89062 424 SUPERFAMILY SSF48264 4 419 2.1E-85 T 12-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_0633 eb00c27275e79f9b06e2827c4da89062 424 PRINTS PR00465 E-class P450 group IV signature 225 251 5.4E-20 T 12-10-2018 IPR002403 Cytochrome P450, E-class, group IV GO:0004497|GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_0633 eb00c27275e79f9b06e2827c4da89062 424 PRINTS PR00465 E-class P450 group IV signature 281 297 5.4E-20 T 12-10-2018 IPR002403 Cytochrome P450, E-class, group IV GO:0004497|GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_0633 eb00c27275e79f9b06e2827c4da89062 424 PRINTS PR00465 E-class P450 group IV signature 356 372 5.4E-20 T 12-10-2018 IPR002403 Cytochrome P450, E-class, group IV GO:0004497|GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_0633 eb00c27275e79f9b06e2827c4da89062 424 PRINTS PR00465 E-class P450 group IV signature 330 348 5.4E-20 T 12-10-2018 IPR002403 Cytochrome P450, E-class, group IV GO:0004497|GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_0633 eb00c27275e79f9b06e2827c4da89062 424 PRINTS PR00465 E-class P450 group IV signature 372 390 5.4E-20 T 12-10-2018 IPR002403 Cytochrome P450, E-class, group IV GO:0004497|GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_0633 eb00c27275e79f9b06e2827c4da89062 424 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 365 374 - T 12-10-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 JDM601_0633 eb00c27275e79f9b06e2827c4da89062 424 PRINTS PR00385 P450 superfamily signature 372 383 4.6E-14 T 12-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_0633 eb00c27275e79f9b06e2827c4da89062 424 PRINTS PR00385 P450 superfamily signature 234 251 4.6E-14 T 12-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_0633 eb00c27275e79f9b06e2827c4da89062 424 PRINTS PR00385 P450 superfamily signature 363 372 4.6E-14 T 12-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_0633 eb00c27275e79f9b06e2827c4da89062 424 PRINTS PR00385 P450 superfamily signature 286 297 4.6E-14 T 12-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_1958 d372c19c07d70fd0adaca9e7ae6b2055 552 Pfam PF02026 RyR domain 469 535 2.3E-6 T 12-10-2018 IPR003032 Ryanodine receptor Ryr Reactome: R-HSA-2672351|Reactome: R-HSA-5578775 JDM601_1958 d372c19c07d70fd0adaca9e7ae6b2055 552 Gene3D G3DSA:3.40.50.720 76 223 1.2E-23 T 12-10-2018 JDM601_1958 d372c19c07d70fd0adaca9e7ae6b2055 552 Gene3D G3DSA:1.10.490.160 460 545 9.4E-6 T 12-10-2018 JDM601_1958 d372c19c07d70fd0adaca9e7ae6b2055 552 SUPERFAMILY SSF51735 77 203 1.05E-19 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_1958 d372c19c07d70fd0adaca9e7ae6b2055 552 Pfam PF02254 TrkA-N domain 80 170 1.3E-15 T 12-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 JDM601_1609 3d7be345d4b0e3de2964b05ea92bbc05 494 Gene3D G3DSA:3.50.50.60 1 165 3.0E-50 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_1609 3d7be345d4b0e3de2964b05ea92bbc05 494 Pfam PF13738 Pyridine nucleotide-disulphide oxidoreductase 7 212 1.7E-19 T 12-10-2018 JDM601_1609 3d7be345d4b0e3de2964b05ea92bbc05 494 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 275 294 4.3E-8 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 JDM601_1609 3d7be345d4b0e3de2964b05ea92bbc05 494 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 4 26 4.3E-8 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 JDM601_1609 3d7be345d4b0e3de2964b05ea92bbc05 494 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 166 190 4.3E-8 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 JDM601_1609 3d7be345d4b0e3de2964b05ea92bbc05 494 Gene3D G3DSA:3.50.50.60 310 482 4.1E-37 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_1609 3d7be345d4b0e3de2964b05ea92bbc05 494 SUPERFAMILY SSF51905 5 407 1.02E-54 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_2286 997bb5c44695b674ca1f62b302b2ab0c 203 SUPERFAMILY SSF63380 2 89 2.3E-23 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel JDM601_2286 997bb5c44695b674ca1f62b302b2ab0c 203 Gene3D G3DSA:2.40.30.20 2 90 5.7E-27 T 12-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 JDM601_2286 997bb5c44695b674ca1f62b302b2ab0c 203 Pfam PF00677 Lumazine binding domain 4 88 7.2E-21 T 12-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 JDM601_2286 997bb5c44695b674ca1f62b302b2ab0c 203 Pfam PF00677 Lumazine binding domain 101 188 3.2E-23 T 12-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 JDM601_2286 997bb5c44695b674ca1f62b302b2ab0c 203 PIRSF PIRSF000498 2 203 8.1E-69 T 12-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 JDM601_2286 997bb5c44695b674ca1f62b302b2ab0c 203 Gene3D G3DSA:2.40.30.20 103 202 4.6E-32 T 12-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 JDM601_2286 997bb5c44695b674ca1f62b302b2ab0c 203 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 2 200 4.1E-59 T 12-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 JDM601_2286 997bb5c44695b674ca1f62b302b2ab0c 203 SUPERFAMILY SSF63380 94 200 1.19E-30 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel JDM601_3219 8310c7ddff9f6ccf7b85e8fa97528bec 250 Pfam PF00702 haloacid dehalogenase-like hydrolase 9 213 1.8E-11 T 12-10-2018 JDM601_3219 8310c7ddff9f6ccf7b85e8fa97528bec 250 SUPERFAMILY SSF56784 9 246 8.71E-36 T 12-10-2018 IPR036412 HAD-like superfamily JDM601_3219 8310c7ddff9f6ccf7b85e8fa97528bec 250 Gene3D G3DSA:1.10.150.240 22 119 7.1E-49 T 12-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 JDM601_3219 8310c7ddff9f6ccf7b85e8fa97528bec 250 Gene3D G3DSA:3.40.50.1000 10 222 7.1E-49 T 12-10-2018 IPR023214 HAD superfamily JDM601_3219 8310c7ddff9f6ccf7b85e8fa97528bec 250 TIGRFAM TIGR02009 PGMB-YQAB-SF: beta-phosphoglucomutase family hydrolase 9 216 3.8E-54 T 12-10-2018 IPR010976 Beta-phosphoglucomutase hydrolase JDM601_3219 8310c7ddff9f6ccf7b85e8fa97528bec 250 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 173 217 2.2E-9 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 JDM601_0684 e97c950c0cf3bd7a65498294bff11243 489 PIRSF PIRSF012666 1 489 1.7E-227 T 12-10-2018 IPR016602 Uncharacterised conserved protein UCP012666 JDM601_0684 e97c950c0cf3bd7a65498294bff11243 489 SUPERFAMILY SSF55931 38 455 4.22E-48 T 12-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 JDM601_0684 e97c950c0cf3bd7a65498294bff11243 489 Gene3D G3DSA:3.30.590.20 40 464 3.5E-57 T 12-10-2018 JDM601_0981 4f23959b00db6205c63f55de45edba7d 496 Pfam PF12804 MobA-like NTP transferase domain 19 153 8.2E-20 T 12-10-2018 IPR025877 MobA-like NTP transferase JDM601_0981 4f23959b00db6205c63f55de45edba7d 496 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 16 473 38.832 T 12-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 JDM601_0981 4f23959b00db6205c63f55de45edba7d 496 Gene3D G3DSA:2.160.10.10 274 461 1.4E-54 T 12-10-2018 JDM601_0981 4f23959b00db6205c63f55de45edba7d 496 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 18 475 1.1E-171 T 12-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 JDM601_0981 4f23959b00db6205c63f55de45edba7d 496 Gene3D G3DSA:3.90.550.10 14 273 9.5E-71 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases JDM601_0981 4f23959b00db6205c63f55de45edba7d 496 SUPERFAMILY SSF53448 19 269 6.04E-58 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases JDM601_0981 4f23959b00db6205c63f55de45edba7d 496 SUPERFAMILY SSF51161 240 459 1.18E-42 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily JDM601_0981 4f23959b00db6205c63f55de45edba7d 496 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 338 370 6.3E-5 T 12-10-2018 IPR001451 Hexapeptide repeat JDM601_0981 4f23959b00db6205c63f55de45edba7d 496 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 416 449 1.8E-4 T 12-10-2018 IPR001451 Hexapeptide repeat JDM601_0377 c742357a58f8800fe5df2cec75d85bc1 304 TIGRFAM TIGR00027 mthyl_TIGR00027: methyltransferase, TIGR00027 family 22 275 3.2E-70 T 12-10-2018 IPR011610 S-adenosyl-L-methionine-dependent methyltransferase, putative GO:0008168 JDM601_0377 c742357a58f8800fe5df2cec75d85bc1 304 Gene3D G3DSA:3.40.50.150 7 304 2.2E-67 T 12-10-2018 JDM601_0377 c742357a58f8800fe5df2cec75d85bc1 304 SUPERFAMILY SSF53335 22 293 4.11E-59 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JDM601_0377 c742357a58f8800fe5df2cec75d85bc1 304 Pfam PF04072 Leucine carboxyl methyltransferase 22 202 1.3E-54 T 12-10-2018 IPR007213 Methyltransferase Ppm1/Ppm2/Tcmp GO:0008168|GO:0032259 JDM601_0965 accc58d653de5c7ab67c03d7697f5831 369 Pfam PF07501 G5 domain 208 281 1.1E-15 T 12-10-2018 IPR011098 G5 domain JDM601_0965 accc58d653de5c7ab67c03d7697f5831 369 Pfam PF06737 Transglycosylase-like domain 293 365 4.3E-32 T 12-10-2018 IPR010618 Transglycosylase-like JDM601_0965 accc58d653de5c7ab67c03d7697f5831 369 Pfam PF03990 Domain of unknown function (DUF348) 37 77 2.5E-10 T 12-10-2018 IPR007137 Resuscitation-promoting factor, domain of unknown function DUF348 JDM601_0965 accc58d653de5c7ab67c03d7697f5831 369 Pfam PF03990 Domain of unknown function (DUF348) 151 190 1.7E-8 T 12-10-2018 IPR007137 Resuscitation-promoting factor, domain of unknown function DUF348 JDM601_0965 accc58d653de5c7ab67c03d7697f5831 369 Gene3D G3DSA:2.20.230.10 202 289 2.8E-29 T 12-10-2018 JDM601_0965 accc58d653de5c7ab67c03d7697f5831 369 SMART SM01208 204 282 3.7E-16 T 12-10-2018 IPR011098 G5 domain JDM601_0965 accc58d653de5c7ab67c03d7697f5831 369 SUPERFAMILY SSF53955 289 367 2.81E-29 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily JDM601_0965 accc58d653de5c7ab67c03d7697f5831 369 Gene3D G3DSA:1.10.530.10 292 369 2.4E-31 T 12-10-2018 JDM601_2602 11810dd1cac29a424f376f8b5f5d306e 159 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 45 155 4.4E-26 T 12-10-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 JDM601_2602 11810dd1cac29a424f376f8b5f5d306e 159 Gene3D G3DSA:3.40.50.12280 22 159 1.3E-45 T 12-10-2018 JDM601_2602 11810dd1cac29a424f376f8b5f5d306e 159 SUPERFAMILY SSF56770 33 157 4.45E-48 T 12-10-2018 JDM601_0093 f5ec245858c3c33ff55f48bd0805a3b4 220 SUPERFAMILY SSF46689 11 88 1.59E-16 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JDM601_0093 f5ec245858c3c33ff55f48bd0805a3b4 220 Pfam PF00440 Bacterial regulatory proteins, tetR family 24 70 3.6E-14 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_0093 f5ec245858c3c33ff55f48bd0805a3b4 220 Pfam PF13977 BetI-type transcriptional repressor, C-terminal 93 202 2.4E-6 T 12-10-2018 IPR039538 BetI-type transcriptional repressor, C-terminal JDM601_0093 f5ec245858c3c33ff55f48bd0805a3b4 220 Gene3D G3DSA:1.10.357.10 12 213 4.1E-28 T 12-10-2018 JDM601_0093 f5ec245858c3c33ff55f48bd0805a3b4 220 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 45 68 1.6E-5 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_0093 f5ec245858c3c33ff55f48bd0805a3b4 220 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 24 37 1.6E-5 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_0093 f5ec245858c3c33ff55f48bd0805a3b4 220 SUPERFAMILY SSF48498 90 207 5.01E-12 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily JDM601_1680 84a9bf34ee0e517c1fb6456895643008 215 SUPERFAMILY SSF54637 17 205 6.75E-37 T 12-10-2018 IPR029069 HotDog domain superfamily JDM601_1680 84a9bf34ee0e517c1fb6456895643008 215 Gene3D G3DSA:1.20.58.350 28 78 5.2E-52 T 12-10-2018 JDM601_1680 84a9bf34ee0e517c1fb6456895643008 215 Pfam PF03061 Thioesterase superfamily 127 198 2.3E-4 T 12-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 JDM601_1680 84a9bf34ee0e517c1fb6456895643008 215 Gene3D G3DSA:3.10.129.10 79 205 5.2E-52 T 12-10-2018 JDM601_1644 07ce4116a2ebf1414ddd6faf69eaeb0a 513 Pfam PF01266 FAD dependent oxidoreductase 27 355 8.5E-48 T 12-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 JDM601_1644 07ce4116a2ebf1414ddd6faf69eaeb0a 513 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 26 38 5.6E-28 T 12-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 JDM601_1644 07ce4116a2ebf1414ddd6faf69eaeb0a 513 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 55 67 5.6E-28 T 12-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 JDM601_1644 07ce4116a2ebf1414ddd6faf69eaeb0a 513 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 373 385 5.6E-28 T 12-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 JDM601_1644 07ce4116a2ebf1414ddd6faf69eaeb0a 513 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 101 113 5.6E-28 T 12-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 JDM601_1644 07ce4116a2ebf1414ddd6faf69eaeb0a 513 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 343 349 5.6E-28 T 12-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 JDM601_1644 07ce4116a2ebf1414ddd6faf69eaeb0a 513 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 39 49 5.6E-28 T 12-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 JDM601_1644 07ce4116a2ebf1414ddd6faf69eaeb0a 513 Gene3D G3DSA:3.50.50.60 27 392 9.6E-104 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_1644 07ce4116a2ebf1414ddd6faf69eaeb0a 513 SUPERFAMILY SSF51905 26 352 6.47E-33 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_1644 07ce4116a2ebf1414ddd6faf69eaeb0a 513 ProSitePatterns PS00977 FAD-dependent glycerol-3-phosphate dehydrogenase signature 1. 31 48 - T 12-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 JDM601_1644 07ce4116a2ebf1414ddd6faf69eaeb0a 513 Gene3D G3DSA:1.10.8.870 431 510 4.5E-11 T 12-10-2018 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 JDM601_1644 07ce4116a2ebf1414ddd6faf69eaeb0a 513 Gene3D G3DSA:3.30.9.10 105 350 9.6E-104 T 12-10-2018 JDM601_1644 07ce4116a2ebf1414ddd6faf69eaeb0a 513 ProSitePatterns PS00978 FAD-dependent glycerol-3-phosphate dehydrogenase signature 2. 378 388 - T 12-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 JDM601_1644 07ce4116a2ebf1414ddd6faf69eaeb0a 513 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 406 498 2.4E-13 T 12-10-2018 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 JDM601_2363 5865731cd6846da6843f9723fb3a1aad 260 SMART SM01007 33 211 1.1E-43 T 12-10-2018 IPR001303 Class II aldolase/adducin N-terminal JDM601_2363 5865731cd6846da6843f9723fb3a1aad 260 Gene3D G3DSA:3.40.225.10 16 253 4.7E-53 T 12-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily JDM601_2363 5865731cd6846da6843f9723fb3a1aad 260 SUPERFAMILY SSF53639 27 234 1.14E-62 T 12-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily JDM601_2363 5865731cd6846da6843f9723fb3a1aad 260 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 33 211 2.9E-37 T 12-10-2018 IPR001303 Class II aldolase/adducin N-terminal JDM601_1601 ddf627ff9cc285102060a498727e180d 287 Pfam PF00561 alpha/beta hydrolase fold 28 156 1.5E-18 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 JDM601_1601 ddf627ff9cc285102060a498727e180d 287 PRINTS PR00412 Epoxide hydrolase signature 33 51 8.4E-6 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 JDM601_1601 ddf627ff9cc285102060a498727e180d 287 PRINTS PR00412 Epoxide hydrolase signature 259 281 8.4E-6 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 JDM601_1601 ddf627ff9cc285102060a498727e180d 287 PRINTS PR00412 Epoxide hydrolase signature 226 242 8.4E-6 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 JDM601_1601 ddf627ff9cc285102060a498727e180d 287 PRINTS PR00412 Epoxide hydrolase signature 53 68 8.4E-6 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 JDM601_1601 ddf627ff9cc285102060a498727e180d 287 SUPERFAMILY SSF53474 3 284 1.49E-44 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_1601 ddf627ff9cc285102060a498727e180d 287 Gene3D G3DSA:3.40.50.1820 2 283 1.2E-53 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_3495 70f5037b8235bcbc018879eba1812b53 272 PIRSF PIRSF000103 1 270 3.5E-61 T 12-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 JDM601_3495 70f5037b8235bcbc018879eba1812b53 272 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 5 18 - T 12-10-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 JDM601_3495 70f5037b8235bcbc018879eba1812b53 272 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 2 161 5.2E-41 T 12-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 JDM601_3495 70f5037b8235bcbc018879eba1812b53 272 Gene3D G3DSA:3.40.50.720 1 161 2.4E-50 T 12-10-2018 JDM601_3495 70f5037b8235bcbc018879eba1812b53 272 SUPERFAMILY SSF48179 163 252 2.72E-14 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 JDM601_3495 70f5037b8235bcbc018879eba1812b53 272 Gene3D G3DSA:1.10.1040.10 162 271 8.9E-15 T 12-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 JDM601_3495 70f5037b8235bcbc018879eba1812b53 272 SUPERFAMILY SSF51735 1 162 5.39E-41 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_3495 70f5037b8235bcbc018879eba1812b53 272 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 164 253 5.1E-14 T 12-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 JDM601_4100 befed76bf8b1b1914ed139af3754710e 231 SUPERFAMILY SSF53474 16 194 1.51E-23 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_4100 befed76bf8b1b1914ed139af3754710e 231 Gene3D G3DSA:3.40.50.1820 9 214 1.4E-22 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_4100 befed76bf8b1b1914ed139af3754710e 231 Pfam PF12697 Alpha/beta hydrolase family 24 208 9.3E-9 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 JDM601_0809 0cbcdc040b1f3922a3e860e0c9cdce61 91 ProDom PD053583 TRANSMEMBRANE MEMBRANE PRECURSOR SIGNAL MB0906 RV0882/MT0905 4 69 1.0E-15 T 12-10-2018 IPR024244 Protein of unknown function DUF2537 JDM601_0809 0cbcdc040b1f3922a3e860e0c9cdce61 91 Pfam PF10801 Protein of unknown function (DUF2537) 7 85 2.4E-28 T 12-10-2018 IPR024244 Protein of unknown function DUF2537 JDM601_0868 928839ff844209954813df54712dfa79 116 SUPERFAMILY SSF54913 8 106 5.78E-33 T 12-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta JDM601_0868 928839ff844209954813df54712dfa79 116 Gene3D G3DSA:3.30.70.120 4 115 4.2E-42 T 12-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal JDM601_0868 928839ff844209954813df54712dfa79 116 Pfam PF02641 Uncharacterized ACR, COG1993 10 105 6.5E-39 T 12-10-2018 IPR003793 Domain of unknown function DUF190 JDM601_4136 c22c5b9ddeb0d697f32e4f222f1acba3 520 Gene3D G3DSA:3.50.50.60 186 329 2.0E-13 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_4136 c22c5b9ddeb0d697f32e4f222f1acba3 520 SUPERFAMILY SSF51905 5 400 2.36E-42 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_4136 c22c5b9ddeb0d697f32e4f222f1acba3 520 Pfam PF01593 Flavin containing amine oxidoreductase 18 333 4.5E-10 T 12-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 JDM601_4136 c22c5b9ddeb0d697f32e4f222f1acba3 520 Gene3D G3DSA:3.50.50.60 7 104 1.3E-12 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_2045 ed2a070550f50e1e035cb5d2bbf3dc12 111 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 4 80 1.5E-9 T 12-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal JDM601_2045 ed2a070550f50e1e035cb5d2bbf3dc12 111 Gene3D G3DSA:3.40.50.720 1 109 3.8E-13 T 12-10-2018 JDM601_2045 ed2a070550f50e1e035cb5d2bbf3dc12 111 SUPERFAMILY SSF51735 4 82 2.88E-11 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_4010 e8bcd8adb010f581113a5703345b44e3 633 Gene3D G3DSA:3.40.50.300 10 176 1.6E-93 T 12-10-2018 JDM601_4010 e8bcd8adb010f581113a5703345b44e3 633 SUPERFAMILY SSF48019 251 368 3.23E-23 T 12-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 JDM601_4010 e8bcd8adb010f581113a5703345b44e3 633 Gene3D G3DSA:1.10.8.60 5 229 1.6E-93 T 12-10-2018 JDM601_4010 e8bcd8adb010f581113a5703345b44e3 633 Pfam PF13177 DNA polymerase III, delta subunit 17 175 5.1E-37 T 12-10-2018 JDM601_4010 e8bcd8adb010f581113a5703345b44e3 633 Gene3D G3DSA:1.20.272.10 249 371 2.0E-6 T 12-10-2018 JDM601_4010 e8bcd8adb010f581113a5703345b44e3 633 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 244 377 1.6E-15 T 12-10-2018 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 JDM601_4010 e8bcd8adb010f581113a5703345b44e3 633 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 2 367 1.3E-109 T 12-10-2018 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 JDM601_4010 e8bcd8adb010f581113a5703345b44e3 633 SMART SM00382 34 177 3.8E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain JDM601_4010 e8bcd8adb010f581113a5703345b44e3 633 SUPERFAMILY SSF52540 29 219 2.85E-52 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_1128 eb6f3804a24969cbd19307295052dd70 359 Gene3D G3DSA:3.10.180.10 7 144 4.4E-8 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase JDM601_1128 eb6f3804a24969cbd19307295052dd70 359 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 163 285 3.9E-10 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain JDM601_1128 eb6f3804a24969cbd19307295052dd70 359 SUPERFAMILY SSF54593 161 314 1.73E-30 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase JDM601_1128 eb6f3804a24969cbd19307295052dd70 359 Gene3D G3DSA:3.10.180.10 159 320 1.2E-36 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase JDM601_1128 eb6f3804a24969cbd19307295052dd70 359 SUPERFAMILY SSF54593 12 127 3.12E-10 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase JDM601_0350 19bf7a60d7be17bae5d7b392a41bdc14 226 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 98 106 6.1E-11 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0350 19bf7a60d7be17bae5d7b392a41bdc14 226 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 117 136 6.1E-11 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0350 19bf7a60d7be17bae5d7b392a41bdc14 226 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 45 56 6.1E-11 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0350 19bf7a60d7be17bae5d7b392a41bdc14 226 Gene3D G3DSA:3.40.50.720 1 219 1.8E-51 T 12-10-2018 JDM601_0350 19bf7a60d7be17bae5d7b392a41bdc14 226 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 45 56 1.5E-17 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0350 19bf7a60d7be17bae5d7b392a41bdc14 226 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 117 136 1.5E-17 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0350 19bf7a60d7be17bae5d7b392a41bdc14 226 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 92 108 1.5E-17 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0350 19bf7a60d7be17bae5d7b392a41bdc14 226 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 138 155 1.5E-17 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0350 19bf7a60d7be17bae5d7b392a41bdc14 226 Pfam PF00106 short chain dehydrogenase 1 157 6.8E-33 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0350 19bf7a60d7be17bae5d7b392a41bdc14 226 PIRSF PIRSF000126 1 223 1.6E-52 T 12-10-2018 JDM601_0350 19bf7a60d7be17bae5d7b392a41bdc14 226 SUPERFAMILY SSF51735 2 217 3.64E-46 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_1388 3b922a2396f9bd1e833205dc38fd6dc2 75 Pfam PF12277 Protein of unknown function (DUF3618) 4 46 1.1E-15 T 12-10-2018 IPR022062 Protein of unknown function DUF3618 JDM601_0764 30c9f295f1812b1f648d8cd0069645e0 270 SUPERFAMILY SSF56349 21 246 1.97E-45 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 JDM601_0764 30c9f295f1812b1f648d8cd0069645e0 270 Gene3D G3DSA:1.10.150.130 9 67 2.8E-7 T 12-10-2018 IPR010998 Integrase/recombinase, N-terminal JDM601_0764 30c9f295f1812b1f648d8cd0069645e0 270 Pfam PF00589 Phage integrase family 73 243 3.8E-28 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 JDM601_0764 30c9f295f1812b1f648d8cd0069645e0 270 Gene3D G3DSA:1.10.443.10 68 256 6.2E-41 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 JDM601_1308 d418d4302714895738b49d892f2281b2 307 Hamap MF_00815 ATP synthase gamma chain [atpG]. 2 303 34.274 T 12-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 JDM601_1308 d418d4302714895738b49d892f2281b2 307 PRINTS PR00126 ATP synthase gamma subunit signature 181 198 2.1E-31 T 12-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 JDM601_1308 d418d4302714895738b49d892f2281b2 307 PRINTS PR00126 ATP synthase gamma subunit signature 281 302 2.1E-31 T 12-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 JDM601_1308 d418d4302714895738b49d892f2281b2 307 PRINTS PR00126 ATP synthase gamma subunit signature 74 93 2.1E-31 T 12-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 JDM601_1308 d418d4302714895738b49d892f2281b2 307 PRINTS PR00126 ATP synthase gamma subunit signature 250 269 2.1E-31 T 12-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 JDM601_1308 d418d4302714895738b49d892f2281b2 307 Gene3D G3DSA:1.10.287.80 7 299 1.2E-87 T 12-10-2018 JDM601_1308 d418d4302714895738b49d892f2281b2 307 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 289 302 - T 12-10-2018 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 JDM601_1308 d418d4302714895738b49d892f2281b2 307 Gene3D G3DSA:3.40.1380.10 61 222 1.2E-87 T 12-10-2018 JDM601_1308 d418d4302714895738b49d892f2281b2 307 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 3 303 1.8E-107 T 12-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 JDM601_1308 d418d4302714895738b49d892f2281b2 307 Pfam PF00231 ATP synthase 4 303 2.6E-89 T 12-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 JDM601_1308 d418d4302714895738b49d892f2281b2 307 SUPERFAMILY SSF52943 3 303 6.28E-78 T 12-10-2018 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 JDM601_2679 a14203f5a274c1a1429ba25f83c9e65c 63 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 57 1.2E-21 T 12-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JDM601_2679 a14203f5a274c1a1429ba25f83c9e65c 63 Pfam PF00830 Ribosomal L28 family 4 59 3.1E-20 T 12-10-2018 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JDM601_2679 a14203f5a274c1a1429ba25f83c9e65c 63 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 63 17.186 T 12-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JDM601_2679 a14203f5a274c1a1429ba25f83c9e65c 63 SUPERFAMILY SSF143800 1 62 4.32E-22 T 12-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JDM601_2679 a14203f5a274c1a1429ba25f83c9e65c 63 Gene3D G3DSA:2.30.170.40 19 63 5.2E-18 T 12-10-2018 IPR037147 Ribosomal protein L28/L24 superfamily GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JDM601_3374 499142b8bc2eee4a5885657bb5ddaf17 140 Pfam PF01796 DUF35 OB-fold domain, acyl-CoA-associated 56 120 1.9E-20 T 12-10-2018 IPR002878 Domain of unknown function DUF35, OB-fold, C-terminal JDM601_3374 499142b8bc2eee4a5885657bb5ddaf17 140 SUPERFAMILY SSF50249 4 126 7.02E-28 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold JDM601_3374 499142b8bc2eee4a5885657bb5ddaf17 140 Pfam PF12172 Rubredoxin-like zinc ribbon domain (DUF35_N) 19 55 1.0E-8 T 12-10-2018 IPR022002 Domain of unknown function DUF35, rubredoxin-like zinc ribbon domain, N-terminal JDM601_0755 fa4c7f05037e02c8caa9d73bd28aa29d 1138 Pfam PF04465 Protein of unknown function (DUF499) 306 955 2.7E-31 T 12-10-2018 IPR007555 Protein of unknown function DUF499 JDM601_0919 765d2511562ef9ed569a6dc3005f790b 205 Gene3D G3DSA:3.40.50.150 4 200 2.4E-49 T 12-10-2018 JDM601_0919 765d2511562ef9ed569a6dc3005f790b 205 Pfam PF13649 Methyltransferase domain 52 147 1.4E-12 T 12-10-2018 JDM601_0919 765d2511562ef9ed569a6dc3005f790b 205 SUPERFAMILY SSF53335 14 185 4.96E-25 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JDM601_0137 d7efd47784ff343bd3a37e30f4832337 401 TIGRFAM TIGR00996 Mtu_fam_mce: virulence factor Mce family protein 42 329 2.4E-47 T 12-10-2018 IPR005693 Virulence factor Mce protein JDM601_0137 d7efd47784ff343bd3a37e30f4832337 401 Pfam PF02470 MlaD protein 66 140 4.2E-12 T 12-10-2018 IPR003399 Mce/MlaD JDM601_1907 02bf8137c8f46b47071e08fbd184a0ca 452 Pfam PF12484 Polymorphic PE/PPE proteins C terminal 307 383 1.5E-8 T 12-10-2018 IPR022171 PPE family, C-terminal JDM601_1907 02bf8137c8f46b47071e08fbd184a0ca 452 SUPERFAMILY SSF140459 2 174 3.4E-59 T 12-10-2018 JDM601_1907 02bf8137c8f46b47071e08fbd184a0ca 452 Gene3D G3DSA:1.20.1260.20 1 174 1.7E-63 T 12-10-2018 IPR038332 PPE superfamily JDM601_1907 02bf8137c8f46b47071e08fbd184a0ca 452 Pfam PF00823 PPE family 5 161 9.1E-58 T 12-10-2018 IPR000030 PPE family JDM601_2368 8f5a2d33e3e9c0a411e8722481f99ee1 227 SUPERFAMILY SSF56281 5 223 1.57E-50 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like JDM601_2368 8f5a2d33e3e9c0a411e8722481f99ee1 227 SMART SM00849 14 206 2.6E-37 T 12-10-2018 IPR001279 Metallo-beta-lactamase JDM601_2368 8f5a2d33e3e9c0a411e8722481f99ee1 227 Gene3D G3DSA:3.60.15.10 5 224 7.7E-59 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like JDM601_2368 8f5a2d33e3e9c0a411e8722481f99ee1 227 Pfam PF00753 Metallo-beta-lactamase superfamily 13 206 1.2E-26 T 12-10-2018 IPR001279 Metallo-beta-lactamase JDM601_3337 68179f61c34dca930facf1462e8c7887 225 Gene3D G3DSA:3.40.1370.10 1 219 6.5E-72 T 12-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 JDM601_3337 68179f61c34dca930facf1462e8c7887 225 SUPERFAMILY SSF52166 10 209 2.22E-72 T 12-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 JDM601_3337 68179f61c34dca930facf1462e8c7887 225 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 16 215 32.37 T 12-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JDM601_3337 68179f61c34dca930facf1462e8c7887 225 Pfam PF00573 Ribosomal protein L4/L1 family 24 208 2.8E-63 T 12-10-2018 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 JDM601_3337 68179f61c34dca930facf1462e8c7887 225 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 24 209 3.4E-68 T 12-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JDM601_0068 3c03c9411d2608fe711d915de0b8d611 42 Pfam PF01244 Membrane dipeptidase (Peptidase family M19) 8 37 1.7E-5 T 12-10-2018 IPR008257 Peptidase M19 GO:0006508|GO:0016805 MetaCyc: PWY-7533|Reactome: R-HSA-2142691|Reactome: R-HSA-5423646 JDM601_0068 3c03c9411d2608fe711d915de0b8d611 42 Gene3D G3DSA:3.20.20.140 1 41 4.9E-7 T 12-10-2018 JDM601_0068 3c03c9411d2608fe711d915de0b8d611 42 SUPERFAMILY SSF51556 3 39 4.08E-6 T 12-10-2018 IPR032466 Metal-dependent hydrolase JDM601_0971 35b8270a6918babd8106d1a9c5cd6975 194 SUPERFAMILY SSF53178 7 192 7.59E-65 T 12-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 JDM601_0971 35b8270a6918babd8106d1a9c5cd6975 194 Pfam PF01195 Peptidyl-tRNA hydrolase 8 188 2.2E-54 T 12-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 JDM601_0971 35b8270a6918babd8106d1a9c5cd6975 194 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 8 180 1.1E-56 T 12-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 JDM601_0971 35b8270a6918babd8106d1a9c5cd6975 194 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 19 32 - T 12-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 JDM601_0971 35b8270a6918babd8106d1a9c5cd6975 194 Gene3D G3DSA:3.40.50.1470 4 193 1.6E-72 T 12-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 JDM601_0971 35b8270a6918babd8106d1a9c5cd6975 194 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 6 184 34.157 T 12-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 JDM601_0971 35b8270a6918babd8106d1a9c5cd6975 194 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 113 123 - T 12-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 JDM601_1615 f3ac0fbedf7843281f0a027e6f767540 344 Gene3D G3DSA:2.102.10.10 9 140 1.0E-35 T 12-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 JDM601_1615 f3ac0fbedf7843281f0a027e6f767540 344 SUPERFAMILY SSF50022 10 119 1.83E-28 T 12-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 JDM601_1615 f3ac0fbedf7843281f0a027e6f767540 344 Gene3D G3DSA:3.30.530.90 150 339 4.8E-33 T 12-10-2018 JDM601_1615 f3ac0fbedf7843281f0a027e6f767540 344 SUPERFAMILY SSF55961 122 322 5.77E-13 T 12-10-2018 JDM601_1615 f3ac0fbedf7843281f0a027e6f767540 344 Pfam PF00355 Rieske [2Fe-2S] domain 13 95 2.3E-15 T 12-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 JDM601_3190 04c3ed0af182f0426a11797e4edcac89 369 Gene3D G3DSA:3.40.50.1820 19 353 5.7E-118 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_3190 04c3ed0af182f0426a11797e4edcac89 369 TIGRFAM TIGR01392 homoserO_Ac_trn: homoserine O-acetyltransferase 15 358 3.5E-126 T 12-10-2018 IPR008220 Homoserine/serine acetyltransferase MetX-like GO:0005737|GO:0009058|GO:0016747 JDM601_3190 04c3ed0af182f0426a11797e4edcac89 369 SUPERFAMILY SSF53474 10 358 1.07E-85 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_3190 04c3ed0af182f0426a11797e4edcac89 369 Hamap MF_00296 Homoserine O-acetyltransferase [metXA]. 5 359 28.817 T 12-10-2018 IPR008220 Homoserine/serine acetyltransferase MetX-like GO:0005737|GO:0009058|GO:0016747 JDM601_3190 04c3ed0af182f0426a11797e4edcac89 369 Gene3D G3DSA:1.10.1740.110 178 281 5.7E-118 T 12-10-2018 JDM601_3190 04c3ed0af182f0426a11797e4edcac89 369 PIRSF PIRSF000443 4 367 1.6E-109 T 12-10-2018 IPR008220 Homoserine/serine acetyltransferase MetX-like GO:0005737|GO:0009058|GO:0016747 JDM601_3190 04c3ed0af182f0426a11797e4edcac89 369 Pfam PF00561 alpha/beta hydrolase fold 43 346 7.7E-28 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 JDM601_1586 e163833cb0508631c4517d5d8550c083 668 ProSitePatterns PS00211 ABC transporters family signature. 582 596 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JDM601_1586 e163833cb0508631c4517d5d8550c083 668 Pfam PF00005 ABC transporter 240 372 1.5E-18 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JDM601_1586 e163833cb0508631c4517d5d8550c083 668 Gene3D G3DSA:3.40.50.300 451 666 6.0E-47 T 12-10-2018 JDM601_1586 e163833cb0508631c4517d5d8550c083 668 SUPERFAMILY SSF52540 218 422 1.74E-36 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_1586 e163833cb0508631c4517d5d8550c083 668 Gene3D G3DSA:3.40.50.300 220 434 1.4E-42 T 12-10-2018 JDM601_1586 e163833cb0508631c4517d5d8550c083 668 Pfam PF09991 Predicted membrane protein (DUF2232) 15 204 3.3E-7 T 12-10-2018 IPR018710 Protein of unknown function DUF2232 JDM601_1586 e163833cb0508631c4517d5d8550c083 668 ProSitePatterns PS00211 ABC transporters family signature. 344 358 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JDM601_1586 e163833cb0508631c4517d5d8550c083 668 SMART SM00382 481 661 1.5E-8 T 12-10-2018 IPR003593 AAA+ ATPase domain JDM601_1586 e163833cb0508631c4517d5d8550c083 668 SMART SM00382 247 423 9.4E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain JDM601_1586 e163833cb0508631c4517d5d8550c083 668 SUPERFAMILY SSF52540 446 662 2.28E-44 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_1586 e163833cb0508631c4517d5d8550c083 668 Pfam PF00005 ABC transporter 472 609 5.3E-20 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JDM601_1168 b51e3ae598b38ed902b651a51e506780 294 Pfam PF07510 Protein of unknown function (DUF1524) 78 216 6.0E-19 T 12-10-2018 IPR011089 Domain of unknown function DUF1524 JDM601_1168 b51e3ae598b38ed902b651a51e506780 294 Pfam PF05901 Excalibur calcium-binding domain 259 294 3.1E-12 T 12-10-2018 IPR008613 Excalibur calcium-binding domain JDM601_1168 b51e3ae598b38ed902b651a51e506780 294 SMART SM00894 258 294 1.8E-18 T 12-10-2018 IPR008613 Excalibur calcium-binding domain JDM601_0132 f19f674e4c5176ca42a58c3a0404986c 221 Pfam PF06912 Protein of unknown function (DUF1275) 16 216 3.3E-33 T 12-10-2018 IPR010699 Protein of unknown function DUF1275 JDM601_0044 f1f4f996632f97720ae4bf56c5c6ba54 108 ProDom PD068262 MB0029 RV0028/MT0030.1 1 101 6.0E-35 T 12-10-2018 IPR024426 Protein of unknown function DUF2694 JDM601_0044 f1f4f996632f97720ae4bf56c5c6ba54 108 Pfam PF10904 Protein of unknown function (DUF2694) 1 97 2.7E-60 T 12-10-2018 IPR024426 Protein of unknown function DUF2694 JDM601_2125 cd0175bea81a6245565da1ad17709604 197 Pfam PF03729 Short repeat of unknown function (DUF308) 139 189 1.2E-8 T 12-10-2018 IPR005325 Protein of unknown function DUF308, membrane JDM601_2125 cd0175bea81a6245565da1ad17709604 197 Pfam PF03729 Short repeat of unknown function (DUF308) 100 151 6.5E-6 T 12-10-2018 IPR005325 Protein of unknown function DUF308, membrane JDM601_2125 cd0175bea81a6245565da1ad17709604 197 Pfam PF03729 Short repeat of unknown function (DUF308) 19 90 2.6E-11 T 12-10-2018 IPR005325 Protein of unknown function DUF308, membrane JDM601_2987 dbeef9e0438ed366cb36511eca238a88 209 ProSitePatterns PS01331 Thymidylate kinase signature. 92 104 - T 12-10-2018 IPR018095 Thymidylate kinase, conserved site GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 JDM601_2987 dbeef9e0438ed366cb36511eca238a88 209 Gene3D G3DSA:3.40.50.300 1 205 5.7E-51 T 12-10-2018 JDM601_2987 dbeef9e0438ed366cb36511eca238a88 209 Pfam PF02223 Thymidylate kinase 5 164 1.7E-24 T 12-10-2018 IPR039430 Thymidylate kinase-like domain KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 JDM601_2987 dbeef9e0438ed366cb36511eca238a88 209 SUPERFAMILY SSF52540 2 185 8.13E-30 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_2158 3cd35f0a814880b4f405695496b23a79 195 Gene3D G3DSA:1.10.357.10 67 190 1.5E-24 T 12-10-2018 JDM601_2158 3cd35f0a814880b4f405695496b23a79 195 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 5.8E-8 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_2158 3cd35f0a814880b4f405695496b23a79 195 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 5.8E-8 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_2158 3cd35f0a814880b4f405695496b23a79 195 SUPERFAMILY SSF46689 3 63 8.75E-16 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JDM601_2158 3cd35f0a814880b4f405695496b23a79 195 PRINTS PR00400 Tetracycline repressor protein signature 24 47 1.9E-10 T 12-10-2018 IPR003012 Tetracycline transcriptional regulator, TetR GO:0045892|GO:0046677 JDM601_2158 3cd35f0a814880b4f405695496b23a79 195 PRINTS PR00400 Tetracycline repressor protein signature 75 94 1.9E-10 T 12-10-2018 IPR003012 Tetracycline transcriptional regulator, TetR GO:0045892|GO:0046677 JDM601_2158 3cd35f0a814880b4f405695496b23a79 195 PRINTS PR00400 Tetracycline repressor protein signature 172 186 1.9E-10 T 12-10-2018 IPR003012 Tetracycline transcriptional regulator, TetR GO:0045892|GO:0046677 JDM601_2158 3cd35f0a814880b4f405695496b23a79 195 SUPERFAMILY SSF48498 70 190 4.67E-21 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily JDM601_2158 3cd35f0a814880b4f405695496b23a79 195 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 58 2.8E-14 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_2158 3cd35f0a814880b4f405695496b23a79 195 Pfam PF02909 Tetracyclin repressor, C-terminal all-alpha domain 71 158 1.2E-11 T 12-10-2018 IPR004111 Tetracycline transcriptional regulator, TetR, C-terminal GO:0045892 JDM601_2158 3cd35f0a814880b4f405695496b23a79 195 Gene3D G3DSA:1.10.10.60 2 66 6.8E-26 T 12-10-2018 JDM601_1891 8938b2916d949f2d01ae47fcaf59fd89 599 SUPERFAMILY SSF81342 108 337 5.34E-16 T 12-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 JDM601_1891 8938b2916d949f2d01ae47fcaf59fd89 599 Pfam PF00174 Oxidoreductase molybdopterin binding domain 436 574 5.7E-33 T 12-10-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 JDM601_1891 8938b2916d949f2d01ae47fcaf59fd89 599 Pfam PF01292 Prokaryotic cytochrome b561 109 336 6.8E-15 T 12-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 JDM601_1891 8938b2916d949f2d01ae47fcaf59fd89 599 SUPERFAMILY SSF56524 392 577 2.75E-49 T 12-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 JDM601_1891 8938b2916d949f2d01ae47fcaf59fd89 599 Gene3D G3DSA:1.20.950.20 173 331 7.5E-11 T 12-10-2018 JDM601_1891 8938b2916d949f2d01ae47fcaf59fd89 599 Gene3D G3DSA:3.90.420.10 419 592 2.2E-46 T 12-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 JDM601_3210 2223a8d54970acbaad1b6052badf33ee 460 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 357 376 - T 12-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 JDM601_3210 2223a8d54970acbaad1b6052badf33ee 460 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 125 220 9.5E-25 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 JDM601_3210 2223a8d54970acbaad1b6052badf33ee 460 Gene3D G3DSA:1.20.140.10 252 406 2.4E-46 T 12-10-2018 JDM601_3210 2223a8d54970acbaad1b6052badf33ee 460 Gene3D G3DSA:2.40.110.10 124 235 1.5E-38 T 12-10-2018 JDM601_3210 2223a8d54970acbaad1b6052badf33ee 460 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 9 113 3.9E-10 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 JDM601_3210 2223a8d54970acbaad1b6052badf33ee 460 Gene3D G3DSA:1.10.540.10 1 117 4.5E-16 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 JDM601_3210 2223a8d54970acbaad1b6052badf33ee 460 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 255 398 3.1E-43 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 JDM601_3210 2223a8d54970acbaad1b6052badf33ee 460 SUPERFAMILY SSF56645 2 230 1.16E-56 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 JDM601_3210 2223a8d54970acbaad1b6052badf33ee 460 SUPERFAMILY SSF47203 256 398 1.61E-46 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 JDM601_2392 3af9a17d98c9912fae3de409e5ab5fd8 348 Gene3D G3DSA:3.90.79.10 171 318 2.0E-21 T 12-10-2018 JDM601_2392 3af9a17d98c9912fae3de409e5ab5fd8 348 ProSitePatterns PS00893 Nudix box signature. 222 243 - T 12-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 JDM601_2392 3af9a17d98c9912fae3de409e5ab5fd8 348 SUPERFAMILY SSF55811 174 298 1.26E-18 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 JDM601_2392 3af9a17d98c9912fae3de409e5ab5fd8 348 Pfam PF00293 NUDIX domain 180 321 1.5E-17 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 JDM601_0663 65668786e001ccb094f5a167f92bec39 142 SUPERFAMILY SSF54747 4 74 9.16E-30 T 12-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily JDM601_0663 65668786e001ccb094f5a167f92bec39 142 ProSitePatterns PS00359 Ribosomal protein L11 signature. 128 142 - T 12-10-2018 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JDM601_0663 65668786e001ccb094f5a167f92bec39 142 Gene3D G3DSA:1.10.10.250 75 142 1.9E-29 T 12-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily JDM601_0663 65668786e001ccb094f5a167f92bec39 142 Pfam PF03946 Ribosomal protein L11, N-terminal domain 11 68 1.6E-29 T 12-10-2018 IPR020784 Ribosomal protein L11, N-terminal JDM601_0663 65668786e001ccb094f5a167f92bec39 142 Gene3D G3DSA:3.30.1550.10 4 74 1.1E-33 T 12-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily JDM601_0663 65668786e001ccb094f5a167f92bec39 142 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 38 75 7.0E-16 T 12-10-2018 JDM601_0663 65668786e001ccb094f5a167f92bec39 142 SUPERFAMILY SSF46906 69 142 1.06E-25 T 12-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily JDM601_0663 65668786e001ccb094f5a167f92bec39 142 SMART SM00649 11 142 1.9E-84 T 12-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 JDM601_0663 65668786e001ccb094f5a167f92bec39 142 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 5 142 7.2E-63 T 12-10-2018 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JDM601_0663 65668786e001ccb094f5a167f92bec39 142 Pfam PF00298 Ribosomal protein L11, RNA binding domain 73 141 1.1E-25 T 12-10-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 JDM601_0663 65668786e001ccb094f5a167f92bec39 142 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 7 142 30.29 T 12-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 JDM601_0701 c755f57c3ba271ea4552e01c7dca7b83 349 SUPERFAMILY SSF56112 15 304 1.9E-46 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily JDM601_0701 c755f57c3ba271ea4552e01c7dca7b83 349 Gene3D G3DSA:3.30.200.20 11 113 3.1E-14 T 12-10-2018 JDM601_0701 c755f57c3ba271ea4552e01c7dca7b83 349 Pfam PF01636 Phosphotransferase enzyme family 35 261 1.2E-27 T 12-10-2018 IPR002575 Aminoglycoside phosphotransferase JDM601_0701 c755f57c3ba271ea4552e01c7dca7b83 349 Gene3D G3DSA:3.90.1200.10 127 347 5.3E-54 T 12-10-2018 JDM601_3956 113130e682cc5e11a7ad55f10a0f5a74 151 SUPERFAMILY SSF55298 1 150 3.46E-55 T 12-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 JDM601_3956 113130e682cc5e11a7ad55f10a0f5a74 151 Pfam PF14588 YjgF/chorismate_mutase-like, putative endoribonuclease 5 150 7.3E-34 T 12-10-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like JDM601_3956 113130e682cc5e11a7ad55f10a0f5a74 151 Gene3D G3DSA:3.30.1330.40 1 150 2.3E-60 T 12-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 JDM601_3637 d00e8b19088c0b61f58cc69f218f0958 163 SUPERFAMILY SSF54427 7 149 2.29E-35 T 12-10-2018 IPR032710 NTF2-like domain superfamily JDM601_3637 d00e8b19088c0b61f58cc69f218f0958 163 Gene3D G3DSA:3.10.450.50 2 157 1.7E-42 T 12-10-2018 JDM601_3637 d00e8b19088c0b61f58cc69f218f0958 163 Pfam PF13577 SnoaL-like domain 11 133 4.3E-27 T 12-10-2018 IPR037401 SnoaL-like domain JDM601_4342 fd6768f360df032770c0764724c30e1a 333 Gene3D G3DSA:3.40.50.300 69 329 3.1E-77 T 12-10-2018 JDM601_4342 fd6768f360df032770c0764724c30e1a 333 Pfam PF13614 AAA domain 75 253 6.9E-59 T 12-10-2018 IPR025669 AAA domain JDM601_4342 fd6768f360df032770c0764724c30e1a 333 SUPERFAMILY SSF52540 75 327 1.54E-65 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_1313 af5c92d17982d6693e958560cc18d807 417 Gene3D G3DSA:3.65.10.10 7 413 1.8E-153 T 12-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 JDM601_1313 af5c92d17982d6693e958560cc18d807 417 Gene3D G3DSA:3.65.10.10 22 230 1.8E-153 T 12-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 JDM601_1313 af5c92d17982d6693e958560cc18d807 417 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 2 416 40.431 T 12-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 JDM601_1313 af5c92d17982d6693e958560cc18d807 417 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 4 415 1.6E-168 T 12-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 JDM601_1313 af5c92d17982d6693e958560cc18d807 417 SUPERFAMILY SSF55205 4 416 5.72E-133 T 12-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 JDM601_1313 af5c92d17982d6693e958560cc18d807 417 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 406 1.4E-113 T 12-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 JDM601_3601 9bd5331fbbe6c8c31760ccbcc92abe4b 207 Gene3D G3DSA:1.10.357.10 17 206 9.3E-25 T 12-10-2018 JDM601_3601 9bd5331fbbe6c8c31760ccbcc92abe4b 207 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 56 79 6.7E-6 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_3601 9bd5331fbbe6c8c31760ccbcc92abe4b 207 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 35 48 6.7E-6 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_3601 9bd5331fbbe6c8c31760ccbcc92abe4b 207 SUPERFAMILY SSF46689 22 88 4.19E-14 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JDM601_3601 9bd5331fbbe6c8c31760ccbcc92abe4b 207 ProSitePatterns PS01081 TetR-type HTH domain signature. 47 78 - T 12-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site JDM601_3601 9bd5331fbbe6c8c31760ccbcc92abe4b 207 Pfam PF00440 Bacterial regulatory proteins, tetR family 36 81 1.4E-11 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_3815 c9a347cb1c51c0c5c29e820f047fe622 432 SUPERFAMILY SSF56059 1 233 7.3E-68 T 12-10-2018 JDM601_3815 c9a347cb1c51c0c5c29e820f047fe622 432 Gene3D G3DSA:1.10.189.10 199 350 2.8E-45 T 12-10-2018 JDM601_3815 c9a347cb1c51c0c5c29e820f047fe622 432 Gene3D G3DSA:3.50.30.10 237 347 2.8E-45 T 12-10-2018 JDM601_3815 c9a347cb1c51c0c5c29e820f047fe622 432 Gene3D G3DSA:3.30.470.20 98 195 1.3E-33 T 12-10-2018 JDM601_3815 c9a347cb1c51c0c5c29e820f047fe622 432 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 1 141 2.6E-19 T 12-10-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 JDM601_3815 c9a347cb1c51c0c5c29e820f047fe622 432 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 152 204 2.8E-6 T 12-10-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 JDM601_3815 c9a347cb1c51c0c5c29e820f047fe622 432 Pfam PF00391 PEP-utilising enzyme, mobile domain 276 345 9.8E-24 T 12-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 JDM601_3815 c9a347cb1c51c0c5c29e820f047fe622 432 Gene3D G3DSA:3.30.1490.20 51 97 9.4E-16 T 12-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 JDM601_3815 c9a347cb1c51c0c5c29e820f047fe622 432 Gene3D G3DSA:1.20.80.30 41 50 9.4E-16 T 12-10-2018 JDM601_3815 c9a347cb1c51c0c5c29e820f047fe622 432 SUPERFAMILY SSF52009 241 352 1.7E-30 T 12-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 JDM601_3815 c9a347cb1c51c0c5c29e820f047fe622 432 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 304 315 - T 12-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 JDM601_2879 f16749d54b918ecae43d1c8cff5ea0cd 382 Gene3D G3DSA:3.30.200.20 23 138 5.2E-43 T 12-10-2018 JDM601_2879 f16749d54b918ecae43d1c8cff5ea0cd 382 Gene3D G3DSA:3.90.1200.10 139 382 1.9E-90 T 12-10-2018 JDM601_2879 f16749d54b918ecae43d1c8cff5ea0cd 382 SUPERFAMILY SSF56112 30 337 2.89E-32 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily JDM601_2879 f16749d54b918ecae43d1c8cff5ea0cd 382 Pfam PF01636 Phosphotransferase enzyme family 75 294 6.7E-23 T 12-10-2018 IPR002575 Aminoglycoside phosphotransferase JDM601_2346 042b36657017b04c4de9b4d4a32bae1e 218 SUPERFAMILY SSF48008 79 211 6.8E-20 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal JDM601_2346 042b36657017b04c4de9b4d4a32bae1e 218 Gene3D G3DSA:1.10.10.10 10 74 1.2E-20 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JDM601_2346 042b36657017b04c4de9b4d4a32bae1e 218 SUPERFAMILY SSF46785 11 78 1.8E-16 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JDM601_2346 042b36657017b04c4de9b4d4a32bae1e 218 SMART SM00895 84 203 2.7E-18 T 12-10-2018 IPR011711 GntR, C-terminal JDM601_2346 042b36657017b04c4de9b4d4a32bae1e 218 Pfam PF00392 Bacterial regulatory proteins, gntR family 14 74 7.2E-18 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 JDM601_2346 042b36657017b04c4de9b4d4a32bae1e 218 SMART SM00345 16 74 8.7E-17 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 JDM601_2346 042b36657017b04c4de9b4d4a32bae1e 218 Pfam PF07729 FCD domain 85 201 1.0E-19 T 12-10-2018 IPR011711 GntR, C-terminal JDM601_2346 042b36657017b04c4de9b4d4a32bae1e 218 Gene3D G3DSA:1.20.120.530 79 217 3.5E-23 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal JDM601_2291 621e648650417828de3c81b3cabf6ad3 466 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 343 354 - T 12-10-2018 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 JDM601_2291 621e648650417828de3c81b3cabf6ad3 466 Gene3D G3DSA:3.40.50.150 168 464 2.1E-59 T 12-10-2018 JDM601_2291 621e648650417828de3c81b3cabf6ad3 466 SUPERFAMILY SSF48013 22 177 3.4E-30 T 12-10-2018 IPR035926 NusB-like superfamily JDM601_2291 621e648650417828de3c81b3cabf6ad3 466 Pfam PF01029 NusB family 22 143 8.0E-24 T 12-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 JDM601_2291 621e648650417828de3c81b3cabf6ad3 466 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 344 356 4.0E-21 T 12-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase JDM601_2291 621e648650417828de3c81b3cabf6ad3 466 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 448 465 4.0E-21 T 12-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase JDM601_2291 621e648650417828de3c81b3cabf6ad3 466 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 281 291 4.0E-21 T 12-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase JDM601_2291 621e648650417828de3c81b3cabf6ad3 466 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 247 261 4.0E-21 T 12-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase JDM601_2291 621e648650417828de3c81b3cabf6ad3 466 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 394 410 4.0E-21 T 12-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase JDM601_2291 621e648650417828de3c81b3cabf6ad3 466 SUPERFAMILY SSF53335 229 463 4.87E-53 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JDM601_2291 621e648650417828de3c81b3cabf6ad3 466 Gene3D G3DSA:1.10.940.10 19 159 4.6E-35 T 12-10-2018 IPR035926 NusB-like superfamily JDM601_2291 621e648650417828de3c81b3cabf6ad3 466 Pfam PF01189 16S rRNA methyltransferase RsmB/F 268 464 3.3E-58 T 12-10-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 JDM601_3542 e6dfc5e8c6b7f5ea52ac7dbea4820f3b 253 Pfam PF11209 Protein of unknown function (DUF2993) 12 238 2.3E-25 T 12-10-2018 IPR021373 Protein of unknown function DUF2993 JDM601_0918 14ede04a225760f2b9b22390537a0d95 93 Pfam PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) 31 80 8.1E-13 T 12-10-2018 IPR007208 Na(+)/H(+) antiporter subunit F-like GO:0015075|GO:0016021|GO:0034220 JDM601_0729 f020aefb601b14f64168eab9ec308e3a 373 Pfam PF02515 CoA-transferase family III 1 359 3.5E-108 T 12-10-2018 IPR003673 CoA-transferase family III GO:0003824 JDM601_0729 f020aefb601b14f64168eab9ec308e3a 373 Gene3D G3DSA:3.40.50.10540 1 368 8.2E-110 T 12-10-2018 IPR023606 CoA-transferase family III domain superfamily JDM601_0729 f020aefb601b14f64168eab9ec308e3a 373 SUPERFAMILY SSF89796 1 370 1.7E-110 T 12-10-2018 IPR023606 CoA-transferase family III domain superfamily JDM601_0729 f020aefb601b14f64168eab9ec308e3a 373 Gene3D G3DSA:3.30.1540.10 221 311 8.2E-110 T 12-10-2018 JDM601_3283 0b43ec4d343789ec25711c1edaac85be 120 SUPERFAMILY SSF46946 2 117 1.44E-45 T 12-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 JDM601_3283 0b43ec4d343789ec25711c1edaac85be 120 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 2 111 3.4E-52 T 12-10-2018 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 JDM601_3283 0b43ec4d343789ec25711c1edaac85be 120 Gene3D G3DSA:1.10.8.50 1 68 1.2E-27 T 12-10-2018 JDM601_3283 0b43ec4d343789ec25711c1edaac85be 120 Pfam PF00416 Ribosomal protein S13/S18 2 105 9.3E-34 T 12-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JDM601_3283 0b43ec4d343789ec25711c1edaac85be 120 Gene3D G3DSA:4.10.910.10 69 120 1.8E-25 T 12-10-2018 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JDM601_3283 0b43ec4d343789ec25711c1edaac85be 120 ProSitePatterns PS00646 Ribosomal protein S13 signature. 84 97 - T 12-10-2018 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JDM601_3283 0b43ec4d343789ec25711c1edaac85be 120 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 115 23.991 T 12-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JDM601_3283 0b43ec4d343789ec25711c1edaac85be 120 PIRSF PIRSF002134 1 120 7.5E-44 T 12-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JDM601_3054 4274295f5911301a63de3b274ec0179e 184 SUPERFAMILY SSF56300 1 159 5.28E-16 T 12-10-2018 JDM601_3054 4274295f5911301a63de3b274ec0179e 184 Gene3D G3DSA:3.60.21.10 1 160 3.0E-7 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like JDM601_2322 82826b1acfc52c911b1b9e8671a1db72 282 Gene3D G3DSA:1.10.3720.10 75 274 7.8E-17 T 12-10-2018 IPR035906 MetI-like superfamily JDM601_2322 82826b1acfc52c911b1b9e8671a1db72 282 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 101 271 4.2E-17 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 JDM601_2322 82826b1acfc52c911b1b9e8671a1db72 282 SUPERFAMILY SSF161098 78 263 1.2E-24 T 12-10-2018 IPR035906 MetI-like superfamily JDM601_3929 77e73053c2024ee5f15e1b7f0b5eb50c 408 Pfam PF13177 DNA polymerase III, delta subunit 36 182 1.6E-33 T 12-10-2018 JDM601_3929 77e73053c2024ee5f15e1b7f0b5eb50c 408 Gene3D G3DSA:3.40.50.300 2 182 3.6E-41 T 12-10-2018 JDM601_3929 77e73053c2024ee5f15e1b7f0b5eb50c 408 SUPERFAMILY SSF52540 6 223 1.2E-40 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_3929 77e73053c2024ee5f15e1b7f0b5eb50c 408 TIGRFAM TIGR00678 holB: DNA polymerase III, delta' subunit 36 219 1.0E-55 T 12-10-2018 IPR004622 DNA polymerase III, delta prime subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 JDM601_3078 4ff9b9a70ac25656fca8a3d27299c523 233 SMART SM01012 171 226 1.1E-23 T 12-10-2018 IPR005561 ANTAR domain GO:0003723 JDM601_3078 4ff9b9a70ac25656fca8a3d27299c523 233 Gene3D G3DSA:1.10.10.10 177 232 2.3E-10 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JDM601_3078 4ff9b9a70ac25656fca8a3d27299c523 233 Gene3D G3DSA:3.30.450.40 4 176 2.7E-16 T 12-10-2018 IPR029016 GAF-like domain superfamily JDM601_3078 4ff9b9a70ac25656fca8a3d27299c523 233 Pfam PF13185 GAF domain 29 166 3.5E-10 T 12-10-2018 IPR003018 GAF domain GO:0005515 JDM601_3078 4ff9b9a70ac25656fca8a3d27299c523 233 Pfam PF03861 ANTAR domain 173 226 1.6E-19 T 12-10-2018 IPR005561 ANTAR domain GO:0003723 JDM601_3078 4ff9b9a70ac25656fca8a3d27299c523 233 SUPERFAMILY SSF52172 163 226 3.78E-9 T 12-10-2018 IPR011006 CheY-like superfamily JDM601_3078 4ff9b9a70ac25656fca8a3d27299c523 233 SUPERFAMILY SSF55781 29 176 2.45E-16 T 12-10-2018 JDM601_3078 4ff9b9a70ac25656fca8a3d27299c523 233 PIRSF PIRSF036625 2 233 2.1E-56 T 12-10-2018 IPR012074 GAF-ANTAR transcription anti-termination regulator, putative JDM601_3200 47c62d6730cafee9de7c1ced6f631be1 945 Pfam PF00672 HAMP domain 340 400 9.5E-7 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JDM601_3200 47c62d6730cafee9de7c1ced6f631be1 945 SMART SM00304 340 406 3.1E-4 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JDM601_3200 47c62d6730cafee9de7c1ced6f631be1 945 SMART SM00387 518 631 6.4E-6 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JDM601_3200 47c62d6730cafee9de7c1ced6f631be1 945 Gene3D G3DSA:3.30.565.10 488 632 3.7E-11 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JDM601_3200 47c62d6730cafee9de7c1ced6f631be1 945 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 524 629 2.4E-6 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JDM601_3200 47c62d6730cafee9de7c1ced6f631be1 945 SUPERFAMILY SSF55874 508 628 1.7E-16 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JDM601_3048 c4a83cd0dad99868b8ee33d3afc1fc62 339 Pfam PF14518 Iron-containing redox enzyme 142 314 1.1E-44 T 12-10-2018 JDM601_3048 c4a83cd0dad99868b8ee33d3afc1fc62 339 SUPERFAMILY SSF48613 138 290 1.41E-11 T 12-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 JDM601_3048 c4a83cd0dad99868b8ee33d3afc1fc62 339 Gene3D G3DSA:1.20.910.10 130 331 2.6E-28 T 12-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 JDM601_3048 c4a83cd0dad99868b8ee33d3afc1fc62 339 SMART SM01236 174 279 1.1E-39 T 12-10-2018 JDM601_2702 96ecd56ed7dfa2eec2161a4c5742443d 457 ProSitePatterns PS00571 Amidases signature. 154 185 - T 12-10-2018 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921|Reactome: R-HSA-2142753 JDM601_2702 96ecd56ed7dfa2eec2161a4c5742443d 457 SUPERFAMILY SSF75304 2 455 3.92E-128 T 12-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 JDM601_2702 96ecd56ed7dfa2eec2161a4c5742443d 457 Pfam PF01425 Amidase 25 445 1.4E-100 T 12-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 JDM601_2702 96ecd56ed7dfa2eec2161a4c5742443d 457 Gene3D G3DSA:3.90.1300.10 2 455 5.0E-136 T 12-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 JDM601_0991 73684cf6b2717eae52578b3fd78709dc 317 SUPERFAMILY SSF53067 137 315 9.98E-38 T 12-10-2018 JDM601_0991 73684cf6b2717eae52578b3fd78709dc 317 Gene3D G3DSA:3.30.420.150 132 317 1.1E-59 T 12-10-2018 JDM601_0991 73684cf6b2717eae52578b3fd78709dc 317 SUPERFAMILY SSF53067 6 131 9.39E-31 T 12-10-2018 JDM601_0991 73684cf6b2717eae52578b3fd78709dc 317 Pfam PF02541 Ppx/GppA phosphatase family 21 314 9.9E-79 T 12-10-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 JDM601_0991 73684cf6b2717eae52578b3fd78709dc 317 Gene3D G3DSA:3.30.420.40 1 130 5.3E-44 T 12-10-2018 JDM601_2997 429a21c6515fc9faa8626d99348cbe2b 217 SUPERFAMILY SSF53335 19 192 4.21E-14 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JDM601_2997 429a21c6515fc9faa8626d99348cbe2b 217 Pfam PF13578 Methyltransferase domain 42 170 2.4E-22 T 12-10-2018 JDM601_2997 429a21c6515fc9faa8626d99348cbe2b 217 Gene3D G3DSA:3.40.50.150 5 203 9.5E-20 T 12-10-2018 JDM601_1699 5b9359a080e2165dd1dfd89bdb813057 118 SUPERFAMILY SSF89360 11 105 4.51E-27 T 12-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 JDM601_1699 5b9359a080e2165dd1dfd89bdb813057 118 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 100 117 - T 12-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 JDM601_1699 5b9359a080e2165dd1dfd89bdb813057 118 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 14 118 1.2E-34 T 12-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 JDM601_1699 5b9359a080e2165dd1dfd89bdb813057 118 Pfam PF01521 Iron-sulphur cluster biosynthesis 16 115 4.4E-17 T 12-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 JDM601_1699 5b9359a080e2165dd1dfd89bdb813057 118 Gene3D G3DSA:2.60.300.12 14 118 2.6E-29 T 12-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 JDM601_0740 6e827689ac811406f3adf1ed9748b830 204 Pfam PF00440 Bacterial regulatory proteins, tetR family 21 67 3.6E-15 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_0740 6e827689ac811406f3adf1ed9748b830 204 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 21 34 3.1E-8 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_0740 6e827689ac811406f3adf1ed9748b830 204 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 42 65 3.1E-8 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_0740 6e827689ac811406f3adf1ed9748b830 204 SUPERFAMILY SSF46689 11 72 4.37E-17 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JDM601_0740 6e827689ac811406f3adf1ed9748b830 204 SUPERFAMILY SSF48498 88 194 5.24E-19 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily JDM601_0740 6e827689ac811406f3adf1ed9748b830 204 Gene3D G3DSA:1.10.357.10 15 191 5.0E-33 T 12-10-2018 JDM601_4259 ab414a7ad99bc8f434e210b73a104f60 527 Pfam PF00501 AMP-binding enzyme 22 425 4.0E-95 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 JDM601_4259 ab414a7ad99bc8f434e210b73a104f60 527 SUPERFAMILY SSF56801 15 519 1.2E-145 T 12-10-2018 JDM601_4259 ab414a7ad99bc8f434e210b73a104f60 527 Gene3D G3DSA:3.30.300.310 421 523 3.9E-32 T 12-10-2018 JDM601_4259 ab414a7ad99bc8f434e210b73a104f60 527 Pfam PF13193 AMP-binding enzyme C-terminal domain 434 509 4.5E-20 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain JDM601_4259 ab414a7ad99bc8f434e210b73a104f60 527 ProSitePatterns PS00455 Putative AMP-binding domain signature. 178 189 - T 12-10-2018 IPR020845 AMP-binding, conserved site JDM601_4259 ab414a7ad99bc8f434e210b73a104f60 527 Gene3D G3DSA:3.40.50.12780 9 418 1.5E-105 T 12-10-2018 JDM601_2120 59a755d7a48c5dfc0e453b0d63a77258 452 PIRSF PIRSF018077 1 452 7.6E-185 T 12-10-2018 IPR004347 Pup ligase/deamidase GO:0010498|GO:0019941 MetaCyc: PWY-7893 JDM601_2120 59a755d7a48c5dfc0e453b0d63a77258 452 Pfam PF03136 Pup-ligase protein 4 422 1.1E-158 T 12-10-2018 IPR004347 Pup ligase/deamidase GO:0010498|GO:0019941 MetaCyc: PWY-7893 JDM601_2120 59a755d7a48c5dfc0e453b0d63a77258 452 Hamap MF_02111 Pup--protein ligase [pafA]. 1 452 50.608 T 12-10-2018 IPR022279 Pup--protein ligase GO:0010498|GO:0016879|GO:0019941 MetaCyc: PWY-7893 JDM601_2120 59a755d7a48c5dfc0e453b0d63a77258 452 TIGRFAM TIGR03686 pupylate_PafA: Pup--protein ligase 3 452 1.6E-238 T 12-10-2018 IPR022279 Pup--protein ligase GO:0010498|GO:0016879|GO:0019941 MetaCyc: PWY-7893 JDM601_3563 bc69d8818ce4a61346a5a760c67a9a9b 417 SUPERFAMILY SSF51338 6 415 1.02E-14 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 JDM601_3563 bc69d8818ce4a61346a5a760c67a9a9b 417 Gene3D G3DSA:3.20.20.140 63 376 1.2E-125 T 12-10-2018 JDM601_3563 bc69d8818ce4a61346a5a760c67a9a9b 417 Gene3D G3DSA:2.30.40.10 16 413 1.2E-125 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 JDM601_3563 bc69d8818ce4a61346a5a760c67a9a9b 417 SUPERFAMILY SSF51556 61 377 1.24E-88 T 12-10-2018 IPR032466 Metal-dependent hydrolase JDM601_3563 bc69d8818ce4a61346a5a760c67a9a9b 417 Pfam PF01979 Amidohydrolase family 58 413 6.8E-34 T 12-10-2018 IPR006680 Amidohydrolase-related GO:0016787 JDM601_2162 f95bb3ead93c4fff76fbb0555da6d417 385 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 232 241 - T 12-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 JDM601_2162 f95bb3ead93c4fff76fbb0555da6d417 385 Gene3D G3DSA:3.40.640.10 53 283 6.1E-121 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 JDM601_2162 f95bb3ead93c4fff76fbb0555da6d417 385 SUPERFAMILY SSF53383 12 379 2.63E-90 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase JDM601_2162 f95bb3ead93c4fff76fbb0555da6d417 385 Pfam PF00155 Aminotransferase class I and II 38 369 5.3E-57 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 JDM601_2162 f95bb3ead93c4fff76fbb0555da6d417 385 Gene3D G3DSA:3.90.1150.10 39 365 6.1E-121 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 JDM601_2132 1a0aae2801e3698065208770e9a24d72 439 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 102 116 - T 12-10-2018 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 JDM601_2132 1a0aae2801e3698065208770e9a24d72 439 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 74 399 6.5E-53 T 12-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme JDM601_2132 1a0aae2801e3698065208770e9a24d72 439 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 23 412 52.088 T 12-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 JDM601_2132 1a0aae2801e3698065208770e9a24d72 439 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 28 408 5.6E-185 T 12-10-2018 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 JDM601_2132 1a0aae2801e3698065208770e9a24d72 439 Gene3D G3DSA:3.40.50.1100 75 405 4.1E-187 T 12-10-2018 JDM601_2132 1a0aae2801e3698065208770e9a24d72 439 PIRSF PIRSF001413 18 414 3.6E-159 T 12-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 JDM601_2132 1a0aae2801e3698065208770e9a24d72 439 Gene3D G3DSA:3.40.50.1100 31 227 4.1E-187 T 12-10-2018 JDM601_2132 1a0aae2801e3698065208770e9a24d72 439 SUPERFAMILY SSF53686 24 411 9.43E-149 T 12-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme JDM601_3731 cb8607aea7a72176ceba953e8bb59f69 256 Gene3D G3DSA:3.40.50.720 2 242 1.5E-60 T 12-10-2018 JDM601_3731 cb8607aea7a72176ceba953e8bb59f69 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 74 85 3.4E-24 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3731 cb8607aea7a72176ceba953e8bb59f69 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 168 185 3.4E-24 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3731 cb8607aea7a72176ceba953e8bb59f69 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 121 137 3.4E-24 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3731 cb8607aea7a72176ceba953e8bb59f69 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 147 166 3.4E-24 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3731 cb8607aea7a72176ceba953e8bb59f69 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 3.4E-24 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3731 cb8607aea7a72176ceba953e8bb59f69 256 Pfam PF00106 short chain dehydrogenase 5 187 1.4E-51 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3731 cb8607aea7a72176ceba953e8bb59f69 256 SUPERFAMILY SSF51735 4 247 5.75E-61 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_3731 cb8607aea7a72176ceba953e8bb59f69 256 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 134 162 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 JDM601_3731 cb8607aea7a72176ceba953e8bb59f69 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 147 166 3.6E-7 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3731 cb8607aea7a72176ceba953e8bb59f69 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 74 85 3.6E-7 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3731 cb8607aea7a72176ceba953e8bb59f69 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 127 135 3.6E-7 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0100 f00a0851640e815dc869051acb6e3a9e 498 SMART SM00507 350 401 1.2E-9 T 12-10-2018 IPR003615 HNH nuclease JDM601_0100 f00a0851640e815dc869051acb6e3a9e 498 Pfam PF02720 Domain of unknown function (DUF222) 28 359 6.8E-54 T 12-10-2018 IPR003870 Domain of unknown function DUF222 JDM601_0993 9ccb094d742d37af52119656f23cbd63 227 SMART SM00448 3 113 1.8E-43 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JDM601_0993 9ccb094d742d37af52119656f23cbd63 227 SMART SM00862 149 225 2.2E-22 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 JDM601_0993 9ccb094d742d37af52119656f23cbd63 227 Gene3D G3DSA:3.40.50.2300 1 125 6.1E-37 T 12-10-2018 JDM601_0993 9ccb094d742d37af52119656f23cbd63 227 Gene3D G3DSA:1.10.10.10 126 226 1.3E-29 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JDM601_0993 9ccb094d742d37af52119656f23cbd63 227 Pfam PF00072 Response regulator receiver domain 5 113 4.0E-28 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JDM601_0993 9ccb094d742d37af52119656f23cbd63 227 SUPERFAMILY SSF52172 3 183 2.7E-42 T 12-10-2018 IPR011006 CheY-like superfamily JDM601_0993 9ccb094d742d37af52119656f23cbd63 227 Pfam PF00486 Transcriptional regulatory protein, C terminal 150 225 3.8E-22 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 JDM601_2075 f41bd289d2e145d9a33c2d1b5c47a091 1304 Pfam PF00271 Helicase conserved C-terminal domain 281 409 3.6E-10 T 12-10-2018 IPR001650 Helicase, C-terminal JDM601_2075 f41bd289d2e145d9a33c2d1b5c47a091 1304 Pfam PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold 627 703 1.8E-16 T 12-10-2018 IPR011709 Domain of unknown function DUF1605 JDM601_2075 f41bd289d2e145d9a33c2d1b5c47a091 1304 SUPERFAMILY SSF52540 61 576 1.61E-103 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_2075 f41bd289d2e145d9a33c2d1b5c47a091 1304 SMART SM00382 75 390 2.0E-5 T 12-10-2018 IPR003593 AAA+ ATPase domain JDM601_2075 f41bd289d2e145d9a33c2d1b5c47a091 1304 Gene3D G3DSA:3.40.50.300 237 427 1.2E-56 T 12-10-2018 JDM601_2075 f41bd289d2e145d9a33c2d1b5c47a091 1304 SMART SM00490 304 410 7.8E-15 T 12-10-2018 IPR001650 Helicase, C-terminal JDM601_2075 f41bd289d2e145d9a33c2d1b5c47a091 1304 Pfam PF11898 Domain of unknown function (DUF3418) 718 1298 1.0E-206 T 12-10-2018 IPR024590 RNA helicase HrpA, C-terminal JDM601_2075 f41bd289d2e145d9a33c2d1b5c47a091 1304 TIGRFAM TIGR01967 DEAH_box_HrpA: RNA helicase HrpA 3 1297 0.0 T 12-10-2018 IPR010222 RNA helicase HrpA GO:0004004 JDM601_2075 f41bd289d2e145d9a33c2d1b5c47a091 1304 Gene3D G3DSA:3.40.50.300 9 236 2.3E-73 T 12-10-2018 JDM601_2075 f41bd289d2e145d9a33c2d1b5c47a091 1304 SMART SM00487 58 243 5.2E-26 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain JDM601_2075 f41bd289d2e145d9a33c2d1b5c47a091 1304 Gene3D G3DSA:1.20.120.1080 454 553 3.8E-18 T 12-10-2018 JDM601_2075 f41bd289d2e145d9a33c2d1b5c47a091 1304 Pfam PF04408 Helicase associated domain (HA2) 473 558 2.1E-18 T 12-10-2018 IPR007502 Helicase-associated domain GO:0004386 JDM601_2075 f41bd289d2e145d9a33c2d1b5c47a091 1304 SMART SM00847 470 560 1.1E-34 T 12-10-2018 IPR007502 Helicase-associated domain GO:0004386 JDM601_0566 8a2dba23ee3d04d71d59a20c2b6053ca 361 ProSitePatterns PS00117 Galactose-1-phosphate uridyl transferase family 1 active site signature. 175 192 - T 12-10-2018 IPR019779 Galactose-1-phosphate uridyl transferase, class I His-active site KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 JDM601_0566 8a2dba23ee3d04d71d59a20c2b6053ca 361 Pfam PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain 42 199 2.0E-43 T 12-10-2018 IPR005849 Galactose-1-phosphate uridyl transferase, N-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 JDM601_0566 8a2dba23ee3d04d71d59a20c2b6053ca 361 PIRSF PIRSF000808 36 361 7.8E-116 T 12-10-2018 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0008108|GO:0008270|GO:0033499 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 JDM601_0566 8a2dba23ee3d04d71d59a20c2b6053ca 361 SUPERFAMILY SSF54197 203 361 4.25E-35 T 12-10-2018 IPR036265 HIT-like superfamily JDM601_0566 8a2dba23ee3d04d71d59a20c2b6053ca 361 TIGRFAM TIGR00209 galT_1: galactose-1-phosphate uridylyltransferase 62 361 8.1E-45 T 12-10-2018 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0008108|GO:0008270|GO:0033499 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 JDM601_0566 8a2dba23ee3d04d71d59a20c2b6053ca 361 Gene3D G3DSA:3.30.428.10 72 199 1.3E-91 T 12-10-2018 IPR036265 HIT-like superfamily JDM601_0566 8a2dba23ee3d04d71d59a20c2b6053ca 361 Gene3D G3DSA:3.30.428.10 44 359 1.3E-91 T 12-10-2018 IPR036265 HIT-like superfamily JDM601_0566 8a2dba23ee3d04d71d59a20c2b6053ca 361 Pfam PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain 212 331 1.4E-16 T 12-10-2018 IPR005850 Galactose-1-phosphate uridyl transferase, C-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 JDM601_0566 8a2dba23ee3d04d71d59a20c2b6053ca 361 SUPERFAMILY SSF54197 41 200 4.91E-49 T 12-10-2018 IPR036265 HIT-like superfamily JDM601_4233 88a8550ce432c01866c71c8ea49a4a9e 151 Gene3D G3DSA:1.10.357.10 1 150 6.5E-32 T 12-10-2018 JDM601_4233 88a8550ce432c01866c71c8ea49a4a9e 151 SUPERFAMILY SSF46689 1 33 2.34E-6 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JDM601_2460 2d600ac9182e8ed025079dc0d0ade26f 201 SUPERFAMILY SSF55620 17 195 5.34E-65 T 12-10-2018 JDM601_2460 2d600ac9182e8ed025079dc0d0ade26f 201 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 18 196 33.303 T 12-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 JDM601_2460 2d600ac9182e8ed025079dc0d0ade26f 201 Pfam PF01227 GTP cyclohydrolase I 23 194 1.8E-61 T 12-10-2018 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 JDM601_2460 2d600ac9182e8ed025079dc0d0ade26f 201 ProSitePatterns PS00860 GTP cyclohydrolase I signature 2. 123 133 - T 12-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 JDM601_2460 2d600ac9182e8ed025079dc0d0ade26f 201 Gene3D G3DSA:1.10.286.10 7 59 4.6E-7 T 12-10-2018 JDM601_2460 2d600ac9182e8ed025079dc0d0ade26f 201 Gene3D G3DSA:3.30.1130.10 64 196 7.4E-54 T 12-10-2018 JDM601_2460 2d600ac9182e8ed025079dc0d0ade26f 201 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 26 193 6.5E-55 T 12-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 JDM601_2460 2d600ac9182e8ed025079dc0d0ade26f 201 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 75 91 - T 12-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 JDM601_2846 ec57a113048c28899b173b9897e1797f 458 SUPERFAMILY SSF51971 3 326 1.13E-59 T 12-10-2018 JDM601_2846 ec57a113048c28899b173b9897e1797f 458 PRINTS PR00419 Adrenodoxin reductase family signature 5 27 9.0E-14 T 12-10-2018 JDM601_2846 ec57a113048c28899b173b9897e1797f 458 PRINTS PR00419 Adrenodoxin reductase family signature 77 87 9.0E-14 T 12-10-2018 JDM601_2846 ec57a113048c28899b173b9897e1797f 458 PRINTS PR00419 Adrenodoxin reductase family signature 149 163 9.0E-14 T 12-10-2018 JDM601_2846 ec57a113048c28899b173b9897e1797f 458 SUPERFAMILY SSF51971 310 453 1.47E-9 T 12-10-2018 JDM601_2846 ec57a113048c28899b173b9897e1797f 458 PIRSF PIRSF000362 1 458 1.4E-155 T 12-10-2018 IPR021163 Ferredoxin-NADP+ reductase, adrenodoxin-type GO:0016491|GO:0055114 Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 JDM601_2846 ec57a113048c28899b173b9897e1797f 458 Gene3D G3DSA:3.40.50.720 6 453 3.2E-165 T 12-10-2018 JDM601_2846 ec57a113048c28899b173b9897e1797f 458 Gene3D G3DSA:3.50.50.60 51 331 3.2E-165 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_2846 ec57a113048c28899b173b9897e1797f 458 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 4 170 1.6E-10 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JDM601_2173 f3937d10e22e4adfbcb24a50499f6a47 611 Pfam PF00501 AMP-binding enzyme 14 457 6.8E-89 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 JDM601_2173 f3937d10e22e4adfbcb24a50499f6a47 611 Gene3D G3DSA:3.40.50.12780 2 321 5.4E-58 T 12-10-2018 JDM601_2173 f3937d10e22e4adfbcb24a50499f6a47 611 Gene3D G3DSA:3.40.50.12780 322 454 5.1E-37 T 12-10-2018 JDM601_2173 f3937d10e22e4adfbcb24a50499f6a47 611 ProSitePatterns PS00455 Putative AMP-binding domain signature. 172 183 - T 12-10-2018 IPR020845 AMP-binding, conserved site JDM601_2173 f3937d10e22e4adfbcb24a50499f6a47 611 SUPERFAMILY SSF56801 8 590 1.06E-112 T 12-10-2018 JDM601_3648 1471e9f39cc739ed114f20db613ffdc6 550 SUPERFAMILY SSF56801 4 536 1.3E-112 T 12-10-2018 JDM601_3648 1471e9f39cc739ed114f20db613ffdc6 550 ProSitePatterns PS00455 Putative AMP-binding domain signature. 169 180 - T 12-10-2018 IPR020845 AMP-binding, conserved site JDM601_3648 1471e9f39cc739ed114f20db613ffdc6 550 Pfam PF13193 AMP-binding enzyme C-terminal domain 448 523 5.4E-15 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain JDM601_3648 1471e9f39cc739ed114f20db613ffdc6 550 Gene3D G3DSA:3.30.300.310 436 537 2.6E-25 T 12-10-2018 JDM601_3648 1471e9f39cc739ed114f20db613ffdc6 550 Gene3D G3DSA:3.40.50.12780 2 432 8.3E-84 T 12-10-2018 JDM601_3648 1471e9f39cc739ed114f20db613ffdc6 550 Pfam PF00501 AMP-binding enzyme 10 432 6.7E-66 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 JDM601_1200 e9baf9e42d61f9d180721f523c99b085 461 Pfam PF13406 Transglycosylase SLT domain 194 241 4.9E-10 T 12-10-2018 IPR031304 Transglycosylase SLT domain 2 JDM601_1200 e9baf9e42d61f9d180721f523c99b085 461 Gene3D G3DSA:1.10.530.10 119 285 7.7E-10 T 12-10-2018 JDM601_1200 e9baf9e42d61f9d180721f523c99b085 461 SUPERFAMILY SSF53955 77 276 5.77E-35 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily JDM601_0455 3251ac1dc10922e251b8878f0d606fbb 472 Pfam PF06114 IrrE N-terminal-like domain 188 310 9.5E-22 T 12-10-2018 IPR010359 IrrE N-terminal-like domain JDM601_0455 3251ac1dc10922e251b8878f0d606fbb 472 Pfam PF01381 Helix-turn-helix 10 63 9.2E-12 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 JDM601_0455 3251ac1dc10922e251b8878f0d606fbb 472 PIRSF PIRSF019251 1 471 1.3E-196 T 12-10-2018 IPR026281 HTH-type transcriptional regulator RamB GO:0006355 JDM601_0455 3251ac1dc10922e251b8878f0d606fbb 472 SMART SM00530 9 64 3.9E-14 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 JDM601_0455 3251ac1dc10922e251b8878f0d606fbb 472 Pfam PF09856 Predicted transcriptional regulator (DUF2083) 311 466 1.2E-69 T 12-10-2018 IPR018653 Domain of unknown function DUF2083,transcriptional regulator JDM601_0455 3251ac1dc10922e251b8878f0d606fbb 472 SUPERFAMILY SSF47413 4 69 4.5E-15 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 JDM601_0455 3251ac1dc10922e251b8878f0d606fbb 472 Gene3D G3DSA:1.10.260.40 2 83 3.3E-15 T 12-10-2018 JDM601_1874 e58c855c591a48cc8b51ed2c38bd2f5f 166 Pfam PF03073 TspO/MBR family 22 162 6.6E-45 T 12-10-2018 IPR004307 TspO/MBR-related protein GO:0016021 JDM601_1874 e58c855c591a48cc8b51ed2c38bd2f5f 166 Gene3D G3DSA:1.20.1260.100 15 166 2.3E-46 T 12-10-2018 IPR038330 TspO/MBR-related superfamily JDM601_1874 e58c855c591a48cc8b51ed2c38bd2f5f 166 PIRSF PIRSF005859 9 166 1.1E-45 T 12-10-2018 IPR004307 TspO/MBR-related protein GO:0016021 JDM601_0029 a9d728f5ae3a41e1cadf42fa7af0990d 456 SUPERFAMILY SSF51905 295 425 3.63E-8 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_0029 a9d728f5ae3a41e1cadf42fa7af0990d 456 Pfam PF00743 Flavin-binding monooxygenase-like 5 425 1.5E-73 T 12-10-2018 IPR020946 Flavin monooxygenase-like GO:0004499|GO:0050660|GO:0050661|GO:0055114 JDM601_0029 a9d728f5ae3a41e1cadf42fa7af0990d 456 PIRSF PIRSF000332 2 430 3.6E-82 T 12-10-2018 IPR000960 Flavin monooxygenase FMO GO:0004499|GO:0050660|GO:0050661|GO:0055114 JDM601_0029 a9d728f5ae3a41e1cadf42fa7af0990d 456 PRINTS PR00370 Flavin-containing monooxygenase (FMO) signature 348 365 9.1E-36 T 12-10-2018 IPR000960 Flavin monooxygenase FMO GO:0004499|GO:0050660|GO:0050661|GO:0055114 JDM601_0029 a9d728f5ae3a41e1cadf42fa7af0990d 456 PRINTS PR00370 Flavin-containing monooxygenase (FMO) signature 302 329 9.1E-36 T 12-10-2018 IPR000960 Flavin monooxygenase FMO GO:0004499|GO:0050660|GO:0050661|GO:0055114 JDM601_0029 a9d728f5ae3a41e1cadf42fa7af0990d 456 PRINTS PR00370 Flavin-containing monooxygenase (FMO) signature 162 176 9.1E-36 T 12-10-2018 IPR000960 Flavin monooxygenase FMO GO:0004499|GO:0050660|GO:0050661|GO:0055114 JDM601_0029 a9d728f5ae3a41e1cadf42fa7af0990d 456 PRINTS PR00370 Flavin-containing monooxygenase (FMO) signature 103 115 9.1E-36 T 12-10-2018 IPR000960 Flavin monooxygenase FMO GO:0004499|GO:0050660|GO:0050661|GO:0055114 JDM601_0029 a9d728f5ae3a41e1cadf42fa7af0990d 456 PRINTS PR00370 Flavin-containing monooxygenase (FMO) signature 189 204 9.1E-36 T 12-10-2018 IPR000960 Flavin monooxygenase FMO GO:0004499|GO:0050660|GO:0050661|GO:0055114 JDM601_0029 a9d728f5ae3a41e1cadf42fa7af0990d 456 PRINTS PR00370 Flavin-containing monooxygenase (FMO) signature 132 148 9.1E-36 T 12-10-2018 IPR000960 Flavin monooxygenase FMO GO:0004499|GO:0050660|GO:0050661|GO:0055114 JDM601_0029 a9d728f5ae3a41e1cadf42fa7af0990d 456 PRINTS PR00370 Flavin-containing monooxygenase (FMO) signature 78 93 9.1E-36 T 12-10-2018 IPR000960 Flavin monooxygenase FMO GO:0004499|GO:0050660|GO:0050661|GO:0055114 JDM601_0029 a9d728f5ae3a41e1cadf42fa7af0990d 456 PRINTS PR00370 Flavin-containing monooxygenase (FMO) signature 4 20 9.1E-36 T 12-10-2018 IPR000960 Flavin monooxygenase FMO GO:0004499|GO:0050660|GO:0050661|GO:0055114 JDM601_0029 a9d728f5ae3a41e1cadf42fa7af0990d 456 PRINTS PR00370 Flavin-containing monooxygenase (FMO) signature 28 52 9.1E-36 T 12-10-2018 IPR000960 Flavin monooxygenase FMO GO:0004499|GO:0050660|GO:0050661|GO:0055114 JDM601_0029 a9d728f5ae3a41e1cadf42fa7af0990d 456 SUPERFAMILY SSF51905 4 233 9.07E-46 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_0029 a9d728f5ae3a41e1cadf42fa7af0990d 456 Gene3D G3DSA:3.50.50.60 3 381 5.0E-74 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_0410 c71b76f0c6ea74a44f4eff324a4ba1bc 194 SUPERFAMILY SSF46689 6 86 4.67E-18 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JDM601_0410 c71b76f0c6ea74a44f4eff324a4ba1bc 194 Pfam PF00440 Bacterial regulatory proteins, tetR family 18 64 3.9E-14 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_0410 c71b76f0c6ea74a44f4eff324a4ba1bc 194 Gene3D G3DSA:1.10.357.10 4 191 2.3E-25 T 12-10-2018 JDM601_0410 c71b76f0c6ea74a44f4eff324a4ba1bc 194 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 39 62 7.8E-7 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_0410 c71b76f0c6ea74a44f4eff324a4ba1bc 194 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 18 31 7.8E-7 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_0243 6777604511971ae1f9bc74a97742cf19 238 Gene3D G3DSA:3.40.50.1400 3 114 2.4E-22 T 12-10-2018 JDM601_0243 6777604511971ae1f9bc74a97742cf19 238 Gene3D G3DSA:3.40.50.1400 116 225 2.3E-19 T 12-10-2018 JDM601_0243 6777604511971ae1f9bc74a97742cf19 238 SUPERFAMILY SSF53800 4 222 2.25E-30 T 12-10-2018 JDM601_0243 6777604511971ae1f9bc74a97742cf19 238 Pfam PF01903 CbiX 126 217 7.3E-10 T 12-10-2018 IPR002762 Cobalamin (vitamin B12) biosynthesis CbiX GO:0009236|GO:0016852 KEGG: 00860+4.99.1.3|MetaCyc: PWY-7377 JDM601_0243 6777604511971ae1f9bc74a97742cf19 238 Pfam PF01903 CbiX 8 106 1.0E-14 T 12-10-2018 IPR002762 Cobalamin (vitamin B12) biosynthesis CbiX GO:0009236|GO:0016852 KEGG: 00860+4.99.1.3|MetaCyc: PWY-7377 JDM601_3779 79efed68e94817426074fcf653f3d219 212 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 115 191 3.0E-6 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 JDM601_3779 79efed68e94817426074fcf653f3d219 212 Gene3D G3DSA:3.40.50.1000 17 207 1.5E-37 T 12-10-2018 IPR023214 HAD superfamily JDM601_3779 79efed68e94817426074fcf653f3d219 212 SUPERFAMILY SSF56784 14 207 6.2E-28 T 12-10-2018 IPR036412 HAD-like superfamily JDM601_3779 79efed68e94817426074fcf653f3d219 212 Gene3D G3DSA:1.10.150.240 26 98 1.5E-37 T 12-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 JDM601_3779 79efed68e94817426074fcf653f3d219 212 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 186 199 7.8E-6 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 JDM601_3779 79efed68e94817426074fcf653f3d219 212 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 12 23 7.8E-6 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 JDM601_3779 79efed68e94817426074fcf653f3d219 212 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 159 179 7.8E-6 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 JDM601_3779 79efed68e94817426074fcf653f3d219 212 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 141 157 7.8E-6 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 JDM601_3779 79efed68e94817426074fcf653f3d219 212 Pfam PF00702 haloacid dehalogenase-like hydrolase 106 191 2.4E-7 T 12-10-2018 JDM601_3779 79efed68e94817426074fcf653f3d219 212 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 93 196 2.0E-16 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 JDM601_1304 c4e83e4081b898e655601244b6acabce 81 ProSitePatterns PS00605 ATP synthase c subunit signature. 40 61 - T 12-10-2018 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 JDM601_1304 c4e83e4081b898e655601244b6acabce 81 PRINTS PR00124 ATP synthase C subunit signature 50 75 1.6E-8 T 12-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 JDM601_1304 c4e83e4081b898e655601244b6acabce 81 PRINTS PR00124 ATP synthase C subunit signature 12 31 1.6E-8 T 12-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 JDM601_1304 c4e83e4081b898e655601244b6acabce 81 PRINTS PR00124 ATP synthase C subunit signature 33 48 1.6E-8 T 12-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 JDM601_1304 c4e83e4081b898e655601244b6acabce 81 Gene3D G3DSA:1.20.20.10 1 80 1.8E-28 T 12-10-2018 IPR038662 F1F0 ATP synthase subunit C superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 JDM601_1304 c4e83e4081b898e655601244b6acabce 81 SUPERFAMILY SSF81333 5 78 2.09E-15 T 12-10-2018 IPR035921 F/V-ATP synthase subunit C superfamily JDM601_1304 c4e83e4081b898e655601244b6acabce 81 Pfam PF00137 ATP synthase subunit C 11 70 1.2E-8 T 12-10-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 JDM601_1304 c4e83e4081b898e655601244b6acabce 81 Hamap MF_01396 ATP synthase subunit c [atpH]. 10 75 13.906 T 12-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 JDM601_1304 c4e83e4081b898e655601244b6acabce 81 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 21 77 2.1E-14 T 12-10-2018 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 JDM601_0880 5576c09135ff3dbfbfea4a4cb86b8eb9 956 SUPERFAMILY SSF82866 717 926 2.88E-33 T 12-10-2018 JDM601_0880 5576c09135ff3dbfbfea4a4cb86b8eb9 956 Gene3D G3DSA:1.20.1640.10 356 400 1.8E-6 T 12-10-2018 JDM601_0880 5576c09135ff3dbfbfea4a4cb86b8eb9 956 SUPERFAMILY SSF82866 151 346 3.79E-27 T 12-10-2018 JDM601_0880 5576c09135ff3dbfbfea4a4cb86b8eb9 956 Pfam PF03176 MMPL family 599 934 3.7E-103 T 12-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 JDM601_0880 5576c09135ff3dbfbfea4a4cb86b8eb9 956 Pfam PF03176 MMPL family 51 379 1.1E-105 T 12-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 JDM601_0880 5576c09135ff3dbfbfea4a4cb86b8eb9 956 TIGRFAM TIGR00833 actII: transport protein 17 926 8.8E-303 T 12-10-2018 IPR004707 Membrane transport protein MmpL family GO:0016021 JDM601_0880 5576c09135ff3dbfbfea4a4cb86b8eb9 956 Gene3D G3DSA:1.20.1640.10 196 355 1.8E-6 T 12-10-2018 JDM601_3527 3228c1eec169f3a435b5d9e8682b6eab 385 Gene3D G3DSA:1.10.1200.80 273 338 1.1E-10 T 12-10-2018 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 JDM601_3527 3228c1eec169f3a435b5d9e8682b6eab 385 PIRSF PIRSF006621 8 349 9.2E-118 T 12-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 JDM601_3527 3228c1eec169f3a435b5d9e8682b6eab 385 Gene3D G3DSA:3.20.20.70 15 264 3.4E-72 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JDM601_3527 3228c1eec169f3a435b5d9e8682b6eab 385 Pfam PF01207 Dihydrouridine synthase (Dus) 21 334 6.3E-108 T 12-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 JDM601_3527 3228c1eec169f3a435b5d9e8682b6eab 385 SUPERFAMILY SSF51395 19 336 2.93E-77 T 12-10-2018 JDM601_3527 3228c1eec169f3a435b5d9e8682b6eab 385 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 110 128 - T 12-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 JDM601_3527 3228c1eec169f3a435b5d9e8682b6eab 385 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 11 339 6.8E-123 T 12-10-2018 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 JDM601_1497 6aa4da3d9b70c6e3ba8545d2a1d2a486 369 Gene3D G3DSA:2.40.110.10 123 218 3.8E-14 T 12-10-2018 JDM601_1497 6aa4da3d9b70c6e3ba8545d2a1d2a486 369 Gene3D G3DSA:1.10.540.10 1 114 7.7E-16 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 JDM601_1497 6aa4da3d9b70c6e3ba8545d2a1d2a486 369 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 110 4.3E-6 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 JDM601_1497 6aa4da3d9b70c6e3ba8545d2a1d2a486 369 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 229 359 1.3E-22 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 JDM601_1497 6aa4da3d9b70c6e3ba8545d2a1d2a486 369 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 116 198 5.3E-10 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 JDM601_1497 6aa4da3d9b70c6e3ba8545d2a1d2a486 369 SUPERFAMILY SSF56645 1 205 8.64E-38 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 JDM601_1497 6aa4da3d9b70c6e3ba8545d2a1d2a486 369 Gene3D G3DSA:1.20.140.10 221 364 1.2E-29 T 12-10-2018 JDM601_1497 6aa4da3d9b70c6e3ba8545d2a1d2a486 369 SUPERFAMILY SSF47203 229 359 2.09E-32 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 JDM601_3396 0d67e3ed7e9bfad38ed8235530d0ea51 391 SUPERFAMILY SSF53901 5 269 8.98E-56 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 JDM601_3396 0d67e3ed7e9bfad38ed8235530d0ea51 391 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 390 3.1E-105 T 12-10-2018 IPR002155 Thiolase GO:0016747 JDM601_3396 0d67e3ed7e9bfad38ed8235530d0ea51 391 SUPERFAMILY SSF53901 272 390 1.05E-36 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 JDM601_3396 0d67e3ed7e9bfad38ed8235530d0ea51 391 Pfam PF00108 Thiolase, N-terminal domain 5 259 8.4E-51 T 12-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 JDM601_3396 0d67e3ed7e9bfad38ed8235530d0ea51 391 Pfam PF02803 Thiolase, C-terminal domain 271 390 6.8E-36 T 12-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 JDM601_3396 0d67e3ed7e9bfad38ed8235530d0ea51 391 Gene3D G3DSA:3.40.47.10 6 275 1.3E-115 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 JDM601_3396 0d67e3ed7e9bfad38ed8235530d0ea51 391 Gene3D G3DSA:3.40.47.10 124 389 1.3E-115 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 JDM601_3396 0d67e3ed7e9bfad38ed8235530d0ea51 391 ProSitePatterns PS00099 Thiolases active site. 373 386 - T 12-10-2018 IPR020610 Thiolase, active site GO:0016747 JDM601_3396 0d67e3ed7e9bfad38ed8235530d0ea51 391 PIRSF PIRSF000429 1 391 4.1E-112 T 12-10-2018 IPR002155 Thiolase GO:0016747 JDM601_2575 13061fa55c9d4f0e7a0993f051430dc2 207 Pfam PF00440 Bacterial regulatory proteins, tetR family 20 63 1.5E-4 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_2575 13061fa55c9d4f0e7a0993f051430dc2 207 Pfam PF02909 Tetracyclin repressor, C-terminal all-alpha domain 81 205 6.2E-17 T 12-10-2018 IPR004111 Tetracycline transcriptional regulator, TetR, C-terminal GO:0045892 JDM601_2575 13061fa55c9d4f0e7a0993f051430dc2 207 SUPERFAMILY SSF46689 18 72 9.23E-8 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JDM601_2575 13061fa55c9d4f0e7a0993f051430dc2 207 PRINTS PR00400 Tetracycline repressor protein signature 192 206 6.6E-15 T 12-10-2018 IPR003012 Tetracycline transcriptional regulator, TetR GO:0045892|GO:0046677 JDM601_2575 13061fa55c9d4f0e7a0993f051430dc2 207 PRINTS PR00400 Tetracycline repressor protein signature 82 101 6.6E-15 T 12-10-2018 IPR003012 Tetracycline transcriptional regulator, TetR GO:0045892|GO:0046677 JDM601_2575 13061fa55c9d4f0e7a0993f051430dc2 207 PRINTS PR00400 Tetracycline repressor protein signature 31 54 6.6E-15 T 12-10-2018 IPR003012 Tetracycline transcriptional regulator, TetR GO:0045892|GO:0046677 JDM601_2575 13061fa55c9d4f0e7a0993f051430dc2 207 PRINTS PR00400 Tetracycline repressor protein signature 138 157 6.6E-15 T 12-10-2018 IPR003012 Tetracycline transcriptional regulator, TetR GO:0045892|GO:0046677 JDM601_2575 13061fa55c9d4f0e7a0993f051430dc2 207 PRINTS PR00400 Tetracycline repressor protein signature 102 125 6.6E-15 T 12-10-2018 IPR003012 Tetracycline transcriptional regulator, TetR GO:0045892|GO:0046677 JDM601_2575 13061fa55c9d4f0e7a0993f051430dc2 207 Gene3D G3DSA:1.10.357.10 72 207 3.3E-31 T 12-10-2018 JDM601_2575 13061fa55c9d4f0e7a0993f051430dc2 207 Gene3D G3DSA:1.10.10.60 2 71 9.3E-15 T 12-10-2018 JDM601_2575 13061fa55c9d4f0e7a0993f051430dc2 207 SUPERFAMILY SSF48498 79 206 1.67E-25 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily JDM601_1089 e6cc68677a24f3079a0f81169b056dd2 325 SUPERFAMILY SSF51679 12 288 1.31E-47 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 JDM601_1089 e6cc68677a24f3079a0f81169b056dd2 325 Gene3D G3DSA:3.20.20.30 3 290 1.1E-53 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 JDM601_1089 e6cc68677a24f3079a0f81169b056dd2 325 Pfam PF00296 Luciferase-like monooxygenase 19 288 9.0E-38 T 12-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 JDM601_2319 253f12da75bac7008751cc12a0b2f17e 175 SUPERFAMILY SSF46689 2 56 7.18E-11 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JDM601_2319 253f12da75bac7008751cc12a0b2f17e 175 Gene3D G3DSA:1.10.357.10 1 173 1.6E-17 T 12-10-2018 JDM601_2319 253f12da75bac7008751cc12a0b2f17e 175 Pfam PF00440 Bacterial regulatory proteins, tetR family 6 43 1.9E-9 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_0150 374f852854aeb4a79c73f3707664841c 247 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 239 2.1E-63 T 12-10-2018 JDM601_0150 374f852854aeb4a79c73f3707664841c 247 Gene3D G3DSA:3.40.50.720 1 246 4.0E-79 T 12-10-2018 JDM601_0150 374f852854aeb4a79c73f3707664841c 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 8.1E-13 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0150 374f852854aeb4a79c73f3707664841c 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 8.1E-13 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0150 374f852854aeb4a79c73f3707664841c 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 8.1E-13 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0150 374f852854aeb4a79c73f3707664841c 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 2.7E-43 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0150 374f852854aeb4a79c73f3707664841c 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 2.7E-43 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0150 374f852854aeb4a79c73f3707664841c 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 2.7E-43 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0150 374f852854aeb4a79c73f3707664841c 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 2.7E-43 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0150 374f852854aeb4a79c73f3707664841c 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 202 222 2.7E-43 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0150 374f852854aeb4a79c73f3707664841c 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 2.7E-43 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0150 374f852854aeb4a79c73f3707664841c 247 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 JDM601_0150 374f852854aeb4a79c73f3707664841c 247 SUPERFAMILY SSF51735 5 240 2.34E-76 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_2640 619871901d6c5a4ac81570bc16062b04 287 Gene3D G3DSA:3.90.226.10 19 282 3.9E-63 T 12-10-2018 JDM601_2640 619871901d6c5a4ac81570bc16062b04 287 Pfam PF00378 Enoyl-CoA hydratase/isomerase 31 255 8.5E-42 T 12-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 JDM601_2640 619871901d6c5a4ac81570bc16062b04 287 SUPERFAMILY SSF52096 19 278 2.49E-65 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily JDM601_2366 149524ecd1da3a2f76c7077705883039 182 PIRSF PIRSF021591 55 182 2.4E-50 T 12-10-2018 IPR016793 Uncharacterised conserved protein UCP021591 JDM601_2366 149524ecd1da3a2f76c7077705883039 182 PIRSF PIRSF021591 2 30 1800.0 T 12-10-2018 IPR016793 Uncharacterised conserved protein UCP021591 JDM601_3905 dc790ed79a66714fc2bd0658c85e9606 411 Pfam PF00872 Transposase, Mutator family 2 378 2.4E-142 T 12-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 JDM601_0614 dc790ed79a66714fc2bd0658c85e9606 411 Pfam PF00872 Transposase, Mutator family 2 378 2.4E-142 T 12-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 JDM601_0385 95bb8a44f7bd917ba6c9ef6be02013ac 225 SUPERFAMILY SSF51391 7 221 2.09E-60 T 12-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 JDM601_0385 95bb8a44f7bd917ba6c9ef6be02013ac 225 Pfam PF02581 Thiamine monophosphate synthase 16 205 2.4E-51 T 12-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 JDM601_0385 95bb8a44f7bd917ba6c9ef6be02013ac 225 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 13 223 24.27 T 12-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 JDM601_0385 95bb8a44f7bd917ba6c9ef6be02013ac 225 Gene3D G3DSA:3.20.20.70 6 224 1.4E-71 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JDM601_0385 95bb8a44f7bd917ba6c9ef6be02013ac 225 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 15 217 1.1E-60 T 12-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 JDM601_0426 4cee0b63083852883eb1ea045cb985f5 541 Pfam PF04851 Type III restriction enzyme, res subunit 7 144 3.7E-14 T 12-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 JDM601_0426 4cee0b63083852883eb1ea045cb985f5 541 SUPERFAMILY SSF52540 7 354 2.89E-24 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_0426 4cee0b63083852883eb1ea045cb985f5 541 SMART SM00487 4 167 0.0026 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain JDM601_0426 4cee0b63083852883eb1ea045cb985f5 541 Gene3D G3DSA:3.40.50.300 1 153 1.0E-17 T 12-10-2018 JDM601_0426 4cee0b63083852883eb1ea045cb985f5 541 Gene3D G3DSA:3.40.50.300 172 359 6.5E-13 T 12-10-2018 JDM601_3610 b7e47781774ed78cf970261b8ab0529b 376 SMART SM00829 6 369 5.1E-4 T 12-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 JDM601_3610 b7e47781774ed78cf970261b8ab0529b 376 Gene3D G3DSA:3.40.50.720 175 314 3.1E-113 T 12-10-2018 JDM601_3610 b7e47781774ed78cf970261b8ab0529b 376 SUPERFAMILY SSF51735 160 335 4.73E-30 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_3610 b7e47781774ed78cf970261b8ab0529b 376 Gene3D G3DSA:3.90.180.10 9 368 3.1E-113 T 12-10-2018 JDM601_3610 b7e47781774ed78cf970261b8ab0529b 376 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 156 7.3E-27 T 12-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 JDM601_3610 b7e47781774ed78cf970261b8ab0529b 376 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 62 76 - T 12-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 JDM601_3610 b7e47781774ed78cf970261b8ab0529b 376 Pfam PF00107 Zinc-binding dehydrogenase 198 329 1.9E-18 T 12-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 JDM601_3610 b7e47781774ed78cf970261b8ab0529b 376 SUPERFAMILY SSF50129 2 184 2.59E-59 T 12-10-2018 IPR011032 GroES-like superfamily JDM601_3610 b7e47781774ed78cf970261b8ab0529b 376 TIGRFAM TIGR03989 Rxyl_3153: NDMA-dependent alcohol dehydrogenase, Rxyl_3153 family 3 371 5.6E-176 T 12-10-2018 IPR023921 Alcohol dehydrogenase, zinc-type, actinomycetes KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396 JDM601_1463 99d3a637e35ee7dbcc6d7f1a93814186 930 SUPERFAMILY SSF50249 349 432 4.16E-16 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold JDM601_1463 99d3a637e35ee7dbcc6d7f1a93814186 930 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 324 738 6.3E-155 T 12-10-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 JDM601_1463 99d3a637e35ee7dbcc6d7f1a93814186 930 SMART SM00316 347 426 1.0E-8 T 12-10-2018 IPR022967 RNA-binding domain, S1 JDM601_1463 99d3a637e35ee7dbcc6d7f1a93814186 930 Pfam PF10150 Ribonuclease E/G family 428 709 1.1E-101 T 12-10-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 JDM601_1463 99d3a637e35ee7dbcc6d7f1a93814186 930 Gene3D G3DSA:1.10.10.2480 10 71 5.7E-7 T 12-10-2018 JDM601_1463 99d3a637e35ee7dbcc6d7f1a93814186 930 Gene3D G3DSA:2.40.50.140 341 432 1.2E-26 T 12-10-2018 JDM601_3229 fcf7bf2b70a2a05837e5f585a7147465 103 Pfam PF05305 Protein of unknown function (DUF732) 10 102 6.1E-10 T 12-10-2018 IPR007969 Domain of unknown function DUF732 JDM601_1294 8dcb1b0565cf8b10e9f52ba8f488a162 360 SUPERFAMILY SSF53686 10 341 1.27E-105 T 12-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme JDM601_1294 8dcb1b0565cf8b10e9f52ba8f488a162 360 PIRSF PIRSF038945 1 359 4.3E-176 T 12-10-2018 IPR026260 Threonine synthase, bacterial/archaeal GO:0004795|GO:0009088 KEGG: 00260+4.2.3.1|KEGG: 00750+4.2.3.1 JDM601_1294 8dcb1b0565cf8b10e9f52ba8f488a162 360 TIGRFAM TIGR00260 thrC: threonine synthase 18 334 1.7E-94 T 12-10-2018 IPR004450 Threonine synthase-like JDM601_1294 8dcb1b0565cf8b10e9f52ba8f488a162 360 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 60 73 - T 12-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 JDM601_1294 8dcb1b0565cf8b10e9f52ba8f488a162 360 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 32 327 8.6E-73 T 12-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme JDM601_1294 8dcb1b0565cf8b10e9f52ba8f488a162 360 Gene3D G3DSA:3.40.50.1100 23 334 1.1E-131 T 12-10-2018 JDM601_1294 8dcb1b0565cf8b10e9f52ba8f488a162 360 Gene3D G3DSA:3.40.50.1100 68 165 1.1E-131 T 12-10-2018 JDM601_3459 c844f6cb60190d21528bd575450aa88c 287 Gene3D G3DSA:3.40.50.1820 8 286 3.2E-64 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_3459 c844f6cb60190d21528bd575450aa88c 287 Pfam PF12697 Alpha/beta hydrolase family 41 278 8.5E-20 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 JDM601_3459 c844f6cb60190d21528bd575450aa88c 287 PRINTS PR00111 Alpha/beta hydrolase fold signature 230 244 1.2E-9 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 JDM601_3459 c844f6cb60190d21528bd575450aa88c 287 PRINTS PR00111 Alpha/beta hydrolase fold signature 108 121 1.2E-9 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 JDM601_3459 c844f6cb60190d21528bd575450aa88c 287 PRINTS PR00111 Alpha/beta hydrolase fold signature 64 79 1.2E-9 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 JDM601_3459 c844f6cb60190d21528bd575450aa88c 287 PRINTS PR00111 Alpha/beta hydrolase fold signature 122 135 1.2E-9 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 JDM601_3459 c844f6cb60190d21528bd575450aa88c 287 SUPERFAMILY SSF53474 8 284 3.22E-58 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_0544 dca3e017058e446829251f3a63edcc94 347 Gene3D G3DSA:3.40.50.1820 98 328 3.9E-15 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_0544 dca3e017058e446829251f3a63edcc94 347 SUPERFAMILY SSF53474 96 338 2.53E-15 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_2698 3b6469f7b225a4daf199eb04a88fcd29 394 Gene3D G3DSA:3.40.640.10 25 285 5.8E-106 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 JDM601_2698 3b6469f7b225a4daf199eb04a88fcd29 394 TIGRFAM TIGR02407 ectoine_ectB: diaminobutyrate--2-oxoglutarate aminotransferase 1 380 4.9E-181 T 12-10-2018 IPR012773 Ectoine biosynthetic protein GO:0019491|GO:0030170|GO:0047307 KEGG: 00260+2.6.1.76|MetaCyc: PWY-6409|MetaCyc: PWY-6562|MetaCyc: PWY-761|MetaCyc: PWY-7855|MetaCyc: PWY-7988 JDM601_2698 3b6469f7b225a4daf199eb04a88fcd29 394 Pfam PF00202 Aminotransferase class-III 1 374 1.5E-73 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 JDM601_2698 3b6469f7b225a4daf199eb04a88fcd29 394 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 203 239 - T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 JDM601_2698 3b6469f7b225a4daf199eb04a88fcd29 394 SUPERFAMILY SSF53383 1 379 4.18E-101 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase JDM601_2698 3b6469f7b225a4daf199eb04a88fcd29 394 PIRSF PIRSF000521 1 98 3.5E-4 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 JDM601_2698 3b6469f7b225a4daf199eb04a88fcd29 394 PIRSF PIRSF000521 153 382 3.1E-28 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 JDM601_2698 3b6469f7b225a4daf199eb04a88fcd29 394 PIRSF PIRSF000521 90 131 0.014 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 JDM601_2698 3b6469f7b225a4daf199eb04a88fcd29 394 TIGRFAM TIGR00709 dat: 2,4-diaminobutyrate 4-transaminase 1 384 3.6E-134 T 12-10-2018 IPR004637 2,4-diaminobutyrate 4-transaminase GO:0008483|GO:0009058 KEGG: 00260+2.6.1.76|MetaCyc: PWY-6409|MetaCyc: PWY-6562|MetaCyc: PWY-761|MetaCyc: PWY-7855|MetaCyc: PWY-7988 JDM601_2698 3b6469f7b225a4daf199eb04a88fcd29 394 Gene3D G3DSA:3.90.1150.10 1 373 5.8E-106 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 JDM601_1638 1a0768178d133e6c5c47c71bfe521e9b 332 Gene3D G3DSA:1.10.10.60 228 331 5.7E-20 T 12-10-2018 JDM601_1638 1a0768178d133e6c5c47c71bfe521e9b 332 Pfam PF12833 Helix-turn-helix domain 251 328 1.1E-15 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 JDM601_1638 1a0768178d133e6c5c47c71bfe521e9b 332 SUPERFAMILY SSF46689 280 330 1.37E-8 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JDM601_1638 1a0768178d133e6c5c47c71bfe521e9b 332 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 20 205 2.9E-37 T 12-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal JDM601_1638 1a0768178d133e6c5c47c71bfe521e9b 332 SMART SM00342 245 327 6.8E-22 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 JDM601_0156 1597e2bb4b504dbd1509a72ea69c930d 565 SUPERFAMILY SSF52016 387 564 2.67E-53 T 12-10-2018 JDM601_0156 1597e2bb4b504dbd1509a72ea69c930d 565 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 473 484 - T 12-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 JDM601_0156 1597e2bb4b504dbd1509a72ea69c930d 565 Pfam PF00920 Dehydratase family 39 562 4.1E-204 T 12-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 JDM601_0156 1597e2bb4b504dbd1509a72ea69c930d 565 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 23 563 6.7E-212 T 12-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 JDM601_0156 1597e2bb4b504dbd1509a72ea69c930d 565 Gene3D G3DSA:3.50.30.80 387 535 3.3E-48 T 12-10-2018 JDM601_0156 1597e2bb4b504dbd1509a72ea69c930d 565 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 9 565 44.952 T 12-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 JDM601_0156 1597e2bb4b504dbd1509a72ea69c930d 565 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 127 137 - T 12-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 JDM601_0156 1597e2bb4b504dbd1509a72ea69c930d 565 SUPERFAMILY SSF143975 5 386 1.57E-134 T 12-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 JDM601_1462 6adc77f9d980fb9752da7fff4dcd4e66 155 ProSitePatterns PS00469 Nucleoside diphosphate kinases active site. 121 129 - T 12-10-2018 IPR023005 Nucleoside diphosphate kinase, active site KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 JDM601_1462 6adc77f9d980fb9752da7fff4dcd4e66 155 Gene3D G3DSA:3.30.70.141 1 149 5.9E-57 T 12-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 JDM601_1462 6adc77f9d980fb9752da7fff4dcd4e66 155 Pfam PF00334 Nucleoside diphosphate kinase 10 142 3.0E-51 T 12-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 JDM601_1462 6adc77f9d980fb9752da7fff4dcd4e66 155 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 9 152 34.132 T 12-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 JDM601_1462 6adc77f9d980fb9752da7fff4dcd4e66 155 SUPERFAMILY SSF54919 7 144 3.14E-53 T 12-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 JDM601_1462 6adc77f9d980fb9752da7fff4dcd4e66 155 PRINTS PR01243 Nucleoside diphosphate kinase signature 56 75 7.6E-42 T 12-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 JDM601_1462 6adc77f9d980fb9752da7fff4dcd4e66 155 PRINTS PR01243 Nucleoside diphosphate kinase signature 121 140 7.6E-42 T 12-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 JDM601_1462 6adc77f9d980fb9752da7fff4dcd4e66 155 PRINTS PR01243 Nucleoside diphosphate kinase signature 98 114 7.6E-42 T 12-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 JDM601_1462 6adc77f9d980fb9752da7fff4dcd4e66 155 PRINTS PR01243 Nucleoside diphosphate kinase signature 12 34 7.6E-42 T 12-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 JDM601_1462 6adc77f9d980fb9752da7fff4dcd4e66 155 PRINTS PR01243 Nucleoside diphosphate kinase signature 76 93 7.6E-42 T 12-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 JDM601_1462 6adc77f9d980fb9752da7fff4dcd4e66 155 SMART SM00562 9 147 1.4E-73 T 12-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 JDM601_0429 4b67a4414ed3c0e1100a3db38aacf6f1 188 SUPERFAMILY SSF46689 5 86 9.98E-20 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JDM601_0429 4b67a4414ed3c0e1100a3db38aacf6f1 188 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 39 62 3.6E-9 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_0429 4b67a4414ed3c0e1100a3db38aacf6f1 188 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 19 32 3.6E-9 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_0429 4b67a4414ed3c0e1100a3db38aacf6f1 188 Pfam PF00440 Bacterial regulatory proteins, tetR family 20 64 6.0E-15 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_0429 4b67a4414ed3c0e1100a3db38aacf6f1 188 Gene3D G3DSA:1.10.357.10 3 188 4.8E-62 T 12-10-2018 JDM601_0429 4b67a4414ed3c0e1100a3db38aacf6f1 188 SUPERFAMILY SSF48498 83 187 1.33E-6 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily JDM601_3036 0217659de8f2758e3a66e2c612db367f 289 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 27 264 1.3E-40 T 12-10-2018 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 JDM601_3036 0217659de8f2758e3a66e2c612db367f 289 Gene3D G3DSA:2.30.30.100 220 267 3.2E-17 T 12-10-2018 JDM601_3036 0217659de8f2758e3a66e2c612db367f 289 Pfam PF02237 Biotin protein ligase C terminal domain 219 263 8.5E-9 T 12-10-2018 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 JDM601_3036 0217659de8f2758e3a66e2c612db367f 289 Gene3D G3DSA:3.30.930.10 1 219 2.1E-65 T 12-10-2018 JDM601_3036 0217659de8f2758e3a66e2c612db367f 289 Pfam PF03099 Biotin/lipoate A/B protein ligase family 52 155 3.0E-9 T 12-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 JDM601_3036 0217659de8f2758e3a66e2c612db367f 289 SUPERFAMILY SSF55681 21 203 4.97E-41 T 12-10-2018 JDM601_1942 5a929f35ce61bbe259ebb2298fb02fd0 137 Gene3D G3DSA:3.10.129.10 12 137 1.3E-46 T 12-10-2018 JDM601_1942 5a929f35ce61bbe259ebb2298fb02fd0 137 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 18 129 1.6E-19 T 12-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 JDM601_1942 5a929f35ce61bbe259ebb2298fb02fd0 137 Pfam PF03061 Thioesterase superfamily 45 125 6.2E-13 T 12-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 JDM601_1942 5a929f35ce61bbe259ebb2298fb02fd0 137 SUPERFAMILY SSF54637 8 129 1.83E-26 T 12-10-2018 IPR029069 HotDog domain superfamily JDM601_0126 df03b6f34e966003a6cdef45dcb8d855 383 Pfam PF02470 MlaD protein 45 118 1.6E-10 T 12-10-2018 IPR003399 Mce/MlaD JDM601_0126 df03b6f34e966003a6cdef45dcb8d855 383 TIGRFAM TIGR00996 Mtu_fam_mce: virulence factor Mce family protein 14 301 4.1E-72 T 12-10-2018 IPR005693 Virulence factor Mce protein JDM601_3625 b8644b525a61aa324d0431187fd121ac 566 TIGRFAM TIGR00996 Mtu_fam_mce: virulence factor Mce family protein 9 298 2.8E-70 T 12-10-2018 IPR005693 Virulence factor Mce protein JDM601_3625 b8644b525a61aa324d0431187fd121ac 566 Pfam PF02470 MlaD protein 39 114 7.8E-17 T 12-10-2018 IPR003399 Mce/MlaD JDM601_0616 cb3b58b3763716228607fbcfd5226278 1069 TIGRFAM TIGR03491 TIGR03491: putative RecB family nuclease, TM0106 family 1 444 1.3E-66 T 12-10-2018 IPR019993 RecB family nuclease, TM0106, putative JDM601_0616 cb3b58b3763716228607fbcfd5226278 1069 Gene3D G3DSA:3.40.50.300 674 857 6.4E-24 T 12-10-2018 JDM601_0616 cb3b58b3763716228607fbcfd5226278 1069 Gene3D G3DSA:3.40.50.300 871 1061 4.0E-36 T 12-10-2018 JDM601_0616 cb3b58b3763716228607fbcfd5226278 1069 Pfam PF13482 RNase_H superfamily 241 444 6.9E-15 T 12-10-2018 IPR038720 YprB, ribonuclease H-like domain JDM601_0616 cb3b58b3763716228607fbcfd5226278 1069 Pfam PF13087 AAA domain 866 1041 2.8E-25 T 12-10-2018 JDM601_0616 cb3b58b3763716228607fbcfd5226278 1069 SUPERFAMILY SSF53098 237 446 1.14E-6 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily JDM601_0616 cb3b58b3763716228607fbcfd5226278 1069 Pfam PF13604 AAA domain 685 837 5.9E-11 T 12-10-2018 JDM601_0616 cb3b58b3763716228607fbcfd5226278 1069 SUPERFAMILY SSF52540 677 1040 6.38E-40 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_2263 0e9d4b27e8382d838126b936001f4235 487 SUPERFAMILY SSF140459 2 141 6.54E-42 T 12-10-2018 JDM601_2263 0e9d4b27e8382d838126b936001f4235 487 Pfam PF00823 PPE family 2 128 6.4E-41 T 12-10-2018 IPR000030 PPE family JDM601_2263 0e9d4b27e8382d838126b936001f4235 487 Gene3D G3DSA:1.20.1260.20 1 142 1.6E-43 T 12-10-2018 IPR038332 PPE superfamily JDM601_3253 439331749cdb0286899a211361533d51 608 Gene3D G3DSA:3.30.300.30 452 576 1.7E-39 T 12-10-2018 JDM601_3253 439331749cdb0286899a211361533d51 608 Gene3D G3DSA:3.40.50.12780 3 451 2.4E-153 T 12-10-2018 JDM601_3253 439331749cdb0286899a211361533d51 608 SUPERFAMILY SSF56801 8 563 1.57E-104 T 12-10-2018 JDM601_3253 439331749cdb0286899a211361533d51 608 Pfam PF00501 AMP-binding enzyme 17 458 5.3E-81 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 JDM601_3874 113668c1678176c54c2a029a524a44de 215 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 1 214 3.9E-75 T 12-10-2018 IPR034683 Cytidylyltransferase IspD/TarI GO:0070567 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 JDM601_3874 113668c1678176c54c2a029a524a44de 215 SUPERFAMILY SSF53448 1 214 6.98E-53 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases JDM601_3874 113668c1678176c54c2a029a524a44de 215 Gene3D G3DSA:3.90.550.10 1 214 4.8E-72 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases JDM601_3874 113668c1678176c54c2a029a524a44de 215 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 1 213 5.5E-68 T 12-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 JDM601_3874 113668c1678176c54c2a029a524a44de 215 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 90 97 - T 12-10-2018 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 JDM601_3874 113668c1678176c54c2a029a524a44de 215 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 1 213 40.708 T 12-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 JDM601_2619 dcd3858fd40e32b35bb768559ed8c3bd 122 Pfam PF02021 Uncharacterised protein family UPF0102 13 105 9.4E-27 T 12-10-2018 IPR003509 Uncharacterised protein family UPF0102 JDM601_2619 dcd3858fd40e32b35bb768559ed8c3bd 122 Gene3D G3DSA:3.40.1350.10 12 121 3.0E-28 T 12-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 JDM601_2619 dcd3858fd40e32b35bb768559ed8c3bd 122 SUPERFAMILY SSF52980 13 109 1.47E-18 T 12-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 JDM601_2619 dcd3858fd40e32b35bb768559ed8c3bd 122 Hamap MF_00048 UPF0102 protein YraN [yraN]. 6 118 22.119 T 12-10-2018 IPR003509 Uncharacterised protein family UPF0102 JDM601_4004 ca9e0d90789596c638f168d2cf087289 103 Pfam PF02575 YbaB/EbfC DNA-binding family 6 94 4.5E-32 T 12-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family JDM601_4004 ca9e0d90789596c638f168d2cf087289 103 PIRSF PIRSF004555 1 103 4.1E-37 T 12-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family JDM601_4004 ca9e0d90789596c638f168d2cf087289 103 Gene3D G3DSA:3.30.1310.10 1 102 2.5E-33 T 12-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily JDM601_4004 ca9e0d90789596c638f168d2cf087289 103 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 2 98 5.0E-24 T 12-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family JDM601_4004 ca9e0d90789596c638f168d2cf087289 103 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 1 93 20.328 T 12-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family JDM601_4004 ca9e0d90789596c638f168d2cf087289 103 SUPERFAMILY SSF82607 6 95 1.05E-28 T 12-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily JDM601_0947 5cefa7a7b3ae4b5980e36ad24e2ae696 191 Gene3D G3DSA:1.10.357.10 4 181 1.0E-18 T 12-10-2018 JDM601_0947 5cefa7a7b3ae4b5980e36ad24e2ae696 191 Pfam PF00440 Bacterial regulatory proteins, tetR family 20 62 9.0E-11 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_0947 5cefa7a7b3ae4b5980e36ad24e2ae696 191 SUPERFAMILY SSF46689 12 82 8.48E-14 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JDM601_4297 b5e026ae29bb188ecbba559efd149ab8 325 Pfam PF08237 PE-PPE domain 100 173 1.0E-7 T 12-10-2018 IPR013228 PE-PPE, C-terminal JDM601_4297 b5e026ae29bb188ecbba559efd149ab8 325 Gene3D G3DSA:3.40.50.1820 48 229 5.0E-9 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_4297 b5e026ae29bb188ecbba559efd149ab8 325 SUPERFAMILY SSF53474 100 246 2.14E-8 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_1395 c27d81f4e75c7f45449b8eb5f23d9fbd 520 SUPERFAMILY SSF52540 39 400 1.03E-47 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_1395 c27d81f4e75c7f45449b8eb5f23d9fbd 520 Gene3D G3DSA:3.40.50.300 5 114 1.7E-12 T 12-10-2018 JDM601_1395 c27d81f4e75c7f45449b8eb5f23d9fbd 520 Gene3D G3DSA:3.40.50.300 215 409 4.0E-23 T 12-10-2018 JDM601_1395 c27d81f4e75c7f45449b8eb5f23d9fbd 520 Pfam PF05872 Bacterial protein of unknown function (DUF853) 35 461 5.9E-189 T 12-10-2018 IPR033186 Helicase HerA-like C-terminal JDM601_0661 cec3b4753ecb050353fa53d21ccf2116 149 ProSitePatterns PS01067 Protein secE/sec61-gamma signature. 95 123 - T 12-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 JDM601_0661 cec3b4753ecb050353fa53d21ccf2116 149 Gene3D G3DSA:1.20.5.1030 89 146 7.4E-16 T 12-10-2018 IPR038379 SecE superfamily JDM601_0661 cec3b4753ecb050353fa53d21ccf2116 149 Hamap MF_00422 Protein translocase subunit SecE [secE]. 90 145 12.091 T 12-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 JDM601_0661 cec3b4753ecb050353fa53d21ccf2116 149 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 94 145 3.4E-18 T 12-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 JDM601_0661 cec3b4753ecb050353fa53d21ccf2116 149 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 93 148 5.5E-21 T 12-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 JDM601_0161 92f3e5c6d3bb694f8b294137aadc92f7 683 Gene3D G3DSA:1.10.1380.10 47 459 2.5E-242 T 12-10-2018 JDM601_0161 92f3e5c6d3bb694f8b294137aadc92f7 683 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 482 494 5.0E-23 T 12-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 JDM601_0161 92f3e5c6d3bb694f8b294137aadc92f7 683 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 580 591 5.0E-23 T 12-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 JDM601_0161 92f3e5c6d3bb694f8b294137aadc92f7 683 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 503 519 5.0E-23 T 12-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 JDM601_0161 92f3e5c6d3bb694f8b294137aadc92f7 683 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 464 476 5.0E-23 T 12-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 JDM601_0161 92f3e5c6d3bb694f8b294137aadc92f7 683 Pfam PF05649 Peptidase family M13 22 420 7.5E-89 T 12-10-2018 IPR008753 Peptidase M13, N-terminal domain GO:0006508 JDM601_0161 92f3e5c6d3bb694f8b294137aadc92f7 683 SUPERFAMILY SSF55486 8 682 7.47E-201 T 12-10-2018 JDM601_0161 92f3e5c6d3bb694f8b294137aadc92f7 683 Gene3D G3DSA:3.40.390.10 16 682 2.5E-242 T 12-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 JDM601_0161 92f3e5c6d3bb694f8b294137aadc92f7 683 Pfam PF01431 Peptidase family M13 472 679 3.2E-78 T 12-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 JDM601_3271 f79af480f03e787ed5dbe1e28aacb493 75 SUPERFAMILY SSF140453 1 67 7.85E-12 T 12-10-2018 IPR036689 ESAT-6-like superfamily JDM601_3271 f79af480f03e787ed5dbe1e28aacb493 75 Gene3D G3DSA:1.10.287.1060 1 71 9.0E-10 T 12-10-2018 JDM601_3271 f79af480f03e787ed5dbe1e28aacb493 75 Pfam PF06013 Proteins of 100 residues with WXG 1 59 1.5E-9 T 12-10-2018 IPR010310 Type VII secretion system ESAT-6-like JDM601_0797 5a9522068328627563eef36d06d560ef 364 Pfam PF06463 Molybdenum Cofactor Synthesis C 215 346 5.7E-35 T 12-10-2018 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 JDM601_0797 5a9522068328627563eef36d06d560ef 364 Pfam PF04055 Radical SAM superfamily 48 209 2.5E-24 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 JDM601_0797 5a9522068328627563eef36d06d560ef 364 Hamap MF_01225_B GTP 3',8-cyclase [moaA]. 34 364 38.195 T 12-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 JDM601_0797 5a9522068328627563eef36d06d560ef 364 Gene3D G3DSA:3.20.20.70 31 364 4.9E-82 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JDM601_0797 5a9522068328627563eef36d06d560ef 364 SUPERFAMILY SSF102114 33 316 1.18E-63 T 12-10-2018 JDM601_0797 5a9522068328627563eef36d06d560ef 364 SMART SM00729 43 248 4.3E-5 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 JDM601_0797 5a9522068328627563eef36d06d560ef 364 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 49 60 - T 12-10-2018 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 JDM601_0797 5a9522068328627563eef36d06d560ef 364 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 34 364 6.2E-106 T 12-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 JDM601_0797 5a9522068328627563eef36d06d560ef 364 Pfam PF13353 4Fe-4S single cluster domain 50 114 9.7E-5 T 12-10-2018 JDM601_3249 7002df0fa4ebefccb146c885576ff393 245 SUPERFAMILY SSF51735 4 242 2.3E-71 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_3249 7002df0fa4ebefccb146c885576ff393 245 Gene3D G3DSA:3.40.50.720 3 244 8.4E-70 T 12-10-2018 JDM601_3249 7002df0fa4ebefccb146c885576ff393 245 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 135 163 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 JDM601_3249 7002df0fa4ebefccb146c885576ff393 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 71 82 9.7E-7 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3249 7002df0fa4ebefccb146c885576ff393 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 148 167 9.7E-7 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3249 7002df0fa4ebefccb146c885576ff393 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 128 136 9.7E-7 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3249 7002df0fa4ebefccb146c885576ff393 245 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 8 241 6.6E-64 T 12-10-2018 JDM601_3249 7002df0fa4ebefccb146c885576ff393 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 71 82 1.3E-37 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3249 7002df0fa4ebefccb146c885576ff393 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 122 138 1.3E-37 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3249 7002df0fa4ebefccb146c885576ff393 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 1.3E-37 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3249 7002df0fa4ebefccb146c885576ff393 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 148 167 1.3E-37 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3249 7002df0fa4ebefccb146c885576ff393 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 204 224 1.3E-37 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3249 7002df0fa4ebefccb146c885576ff393 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 169 186 1.3E-37 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2836 dba56286783fc887ac0f6337242ba316 204 Gene3D G3DSA:3.40.50.12740 1 194 1.7E-25 T 12-10-2018 JDM601_2836 dba56286783fc887ac0f6337242ba316 204 SUPERFAMILY SSF46894 130 182 2.89E-8 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 JDM601_2836 dba56286783fc887ac0f6337242ba316 204 Pfam PF00072 Response regulator receiver domain 16 106 2.9E-7 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JDM601_2836 dba56286783fc887ac0f6337242ba316 204 SUPERFAMILY SSF52172 16 121 2.34E-10 T 12-10-2018 IPR011006 CheY-like superfamily JDM601_2836 dba56286783fc887ac0f6337242ba316 204 Pfam PF00196 Bacterial regulatory proteins, luxR family 133 175 1.2E-6 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JDM601_2836 dba56286783fc887ac0f6337242ba316 204 SMART SM00421 131 188 0.0045 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JDM601_3025 1131003d1fbad63ddbf7777c49e7aec8 333 TIGRFAM TIGR00975 3a0107s03: phosphate ABC transporter, phosphate-binding protein PstS 9 332 2.1E-91 T 12-10-2018 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 JDM601_3025 1131003d1fbad63ddbf7777c49e7aec8 333 SUPERFAMILY SSF53850 9 333 1.32E-70 T 12-10-2018 JDM601_3025 1131003d1fbad63ddbf7777c49e7aec8 333 Gene3D G3DSA:3.40.190.10 12 319 1.3E-101 T 12-10-2018 JDM601_3025 1131003d1fbad63ddbf7777c49e7aec8 333 Pfam PF12849 PBP superfamily domain 7 299 6.8E-47 T 12-10-2018 IPR024370 PBP domain JDM601_3025 1131003d1fbad63ddbf7777c49e7aec8 333 PIRSF PIRSF002756 1 333 2.2E-96 T 12-10-2018 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 JDM601_3025 1131003d1fbad63ddbf7777c49e7aec8 333 Gene3D G3DSA:3.40.190.10 92 274 1.3E-101 T 12-10-2018 JDM601_1193 b0c62403504f9ffd0338fd2c4edcd4f9 208 SUPERFAMILY SSF48498 110 174 7.79E-7 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily JDM601_1193 b0c62403504f9ffd0338fd2c4edcd4f9 208 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 56 8.2E-15 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_1193 b0c62403504f9ffd0338fd2c4edcd4f9 208 SUPERFAMILY SSF46689 9 78 5.08E-17 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JDM601_1193 b0c62403504f9ffd0338fd2c4edcd4f9 208 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 55 9.7E-7 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_1193 b0c62403504f9ffd0338fd2c4edcd4f9 208 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 9.7E-7 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_1193 b0c62403504f9ffd0338fd2c4edcd4f9 208 Gene3D G3DSA:1.10.357.10 1 208 8.2E-93 T 12-10-2018 JDM601_0295 81b1934c019eea4c1089a34acfaf0cb1 95 SUPERFAMILY SSF140453 5 92 8.89E-7 T 12-10-2018 IPR036689 ESAT-6-like superfamily JDM601_0295 81b1934c019eea4c1089a34acfaf0cb1 95 Gene3D G3DSA:1.10.287.1060 1 95 9.2E-34 T 12-10-2018 JDM601_0287 81b1934c019eea4c1089a34acfaf0cb1 95 SUPERFAMILY SSF140453 5 92 8.89E-7 T 12-10-2018 IPR036689 ESAT-6-like superfamily JDM601_0287 81b1934c019eea4c1089a34acfaf0cb1 95 Gene3D G3DSA:1.10.287.1060 1 95 9.2E-34 T 12-10-2018 JDM601_1898 1e1173fd4a27b50ed68906452702c955 504 Pfam PF08817 WXG100 protein secretion system (Wss), protein YukD 24 104 7.7E-13 T 12-10-2018 IPR024962 YukD-like JDM601_1898 1e1173fd4a27b50ed68906452702c955 504 PIRSF PIRSF017804 14 504 9.8E-47 T 12-10-2018 IPR006707 Type VII secretion system membrane protein EccD JDM601_1898 1e1173fd4a27b50ed68906452702c955 504 TIGRFAM TIGR03920 T7SS_EccD: type VII secretion integral membrane protein EccD 24 503 1.1E-103 T 12-10-2018 IPR006707 Type VII secretion system membrane protein EccD JDM601_1898 1e1173fd4a27b50ed68906452702c955 504 Gene3D G3DSA:3.10.20.90 18 105 4.6E-8 T 12-10-2018 JDM601_3470 af0b8f02336b064aa2e51cd9674d8f6c 484 TIGRFAM TIGR00996 Mtu_fam_mce: virulence factor Mce family protein 11 300 1.7E-68 T 12-10-2018 IPR005693 Virulence factor Mce protein JDM601_3470 af0b8f02336b064aa2e51cd9674d8f6c 484 Pfam PF02470 MlaD protein 34 108 1.8E-15 T 12-10-2018 IPR003399 Mce/MlaD JDM601_0668 aecd0b562fa246c56a7095ebb7142f6e 448 Gene3D G3DSA:1.10.510.10 266 379 5.0E-6 T 12-10-2018 JDM601_0668 aecd0b562fa246c56a7095ebb7142f6e 448 Pfam PF01636 Phosphotransferase enzyme family 278 314 1.3E-6 T 12-10-2018 IPR002575 Aminoglycoside phosphotransferase JDM601_0668 aecd0b562fa246c56a7095ebb7142f6e 448 Pfam PF03109 ABC1 family 110 230 8.8E-36 T 12-10-2018 IPR004147 UbiB domain JDM601_0668 aecd0b562fa246c56a7095ebb7142f6e 448 SUPERFAMILY SSF56112 94 315 4.99E-30 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily JDM601_3522 a55f69047f84b73bda5cade7fdd57897 614 Gene3D G3DSA:3.50.50.60 62 326 3.9E-50 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_3522 a55f69047f84b73bda5cade7fdd57897 614 SUPERFAMILY SSF51905 69 530 6.26E-42 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_3522 a55f69047f84b73bda5cade7fdd57897 614 Pfam PF13450 NAD(P)-binding Rossmann-like domain 71 121 1.6E-8 T 12-10-2018 JDM601_3522 a55f69047f84b73bda5cade7fdd57897 614 Gene3D G3DSA:3.50.50.60 411 612 1.2E-27 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_3754 ff9ad566887580c484ed042e839f5b4d 255 Pfam PF00378 Enoyl-CoA hydratase/isomerase 10 253 7.9E-45 T 12-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 JDM601_3754 ff9ad566887580c484ed042e839f5b4d 255 Gene3D G3DSA:3.90.226.10 1 193 4.6E-48 T 12-10-2018 JDM601_3754 ff9ad566887580c484ed042e839f5b4d 255 Gene3D G3DSA:1.10.12.10 197 253 1.9E-20 T 12-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal JDM601_3754 ff9ad566887580c484ed042e839f5b4d 255 SUPERFAMILY SSF52096 3 252 7.55E-62 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily JDM601_0428 4830b85c69e18be8b8c28c885a61ddb2 302 SUPERFAMILY SSF51735 9 295 5.18E-49 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_0428 4830b85c69e18be8b8c28c885a61ddb2 302 Pfam PF00106 short chain dehydrogenase 16 220 3.6E-24 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0428 4830b85c69e18be8b8c28c885a61ddb2 302 Gene3D G3DSA:3.40.50.720 1 301 7.1E-78 T 12-10-2018 JDM601_0428 4830b85c69e18be8b8c28c885a61ddb2 302 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 16 33 1.5E-11 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0428 4830b85c69e18be8b8c28c885a61ddb2 302 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 92 103 1.5E-11 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0428 4830b85c69e18be8b8c28c885a61ddb2 302 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 195 1.5E-11 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0428 4830b85c69e18be8b8c28c885a61ddb2 302 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 137 153 1.5E-11 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0428 4830b85c69e18be8b8c28c885a61ddb2 302 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 143 151 7.2E-6 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0428 4830b85c69e18be8b8c28c885a61ddb2 302 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 92 103 7.2E-6 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0428 4830b85c69e18be8b8c28c885a61ddb2 302 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 176 195 7.2E-6 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2191 00fe61aad1379a7f478ca7a3dce92ab2 152 Pfam PF01814 Hemerythrin HHE cation binding domain 5 120 8.7E-13 T 12-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 JDM601_2191 00fe61aad1379a7f478ca7a3dce92ab2 152 Gene3D G3DSA:1.20.120.520 3 148 3.4E-17 T 12-10-2018 JDM601_2499 b79330a5feff973c11adfee9b479de73 776 Pfam PF01580 FtsK/SpoIIIE family 386 586 6.7E-64 T 12-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 JDM601_2499 b79330a5feff973c11adfee9b479de73 776 Gene3D G3DSA:1.10.10.10 692 753 2.5E-19 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JDM601_2499 b79330a5feff973c11adfee9b479de73 776 Gene3D G3DSA:3.30.980.40 280 382 6.1E-32 T 12-10-2018 JDM601_2499 b79330a5feff973c11adfee9b479de73 776 Gene3D G3DSA:3.40.50.300 383 672 2.4E-104 T 12-10-2018 JDM601_2499 b79330a5feff973c11adfee9b479de73 776 SMART SM00843 687 752 2.0E-29 T 12-10-2018 IPR018541 FtsK gamma domain JDM601_2499 b79330a5feff973c11adfee9b479de73 776 SUPERFAMILY SSF46785 688 753 5.44E-18 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JDM601_2499 b79330a5feff973c11adfee9b479de73 776 Pfam PF09397 Ftsk gamma domain 692 749 1.8E-22 T 12-10-2018 IPR018541 FtsK gamma domain JDM601_2499 b79330a5feff973c11adfee9b479de73 776 SUPERFAMILY SSF52540 360 656 3.96E-46 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_0882 326373626855f55cab4f9eb433a205c7 696 Gene3D G3DSA:2.60.40.1180 248 691 9.5E-153 T 12-10-2018 IPR013780 Glycosyl hydrolase, all-beta JDM601_0882 326373626855f55cab4f9eb433a205c7 696 SUPERFAMILY SSF51445 233 570 2.03E-50 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily JDM601_0882 326373626855f55cab4f9eb433a205c7 696 Gene3D G3DSA:3.20.20.80 257 613 9.5E-153 T 12-10-2018 JDM601_0882 326373626855f55cab4f9eb433a205c7 696 Pfam PF00150 Cellulase (glycosyl hydrolase family 5) 276 568 2.2E-29 T 12-10-2018 IPR001547 Glycoside hydrolase, family 5 GO:0004553|GO:0005975 JDM601_2386 c04a1c1c162806445702e0963804a5e7 184 PIRSF PIRSF005639 1 184 2.6E-62 T 12-10-2018 IPR002161 Pyridoxal 5'-phosphate synthase subunit PdxT/SNO GO:0004359|GO:0042819|GO:0042823 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 JDM601_2386 c04a1c1c162806445702e0963804a5e7 184 SUPERFAMILY SSF52317 4 180 3.55E-42 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like JDM601_2386 c04a1c1c162806445702e0963804a5e7 184 TIGRFAM TIGR03800 PLP_synth_Pdx2: pyridoxal 5'-phosphate synthase, glutaminase subunit Pdx2 1 178 1.2E-60 T 12-10-2018 IPR002161 Pyridoxal 5'-phosphate synthase subunit PdxT/SNO GO:0004359|GO:0042819|GO:0042823 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 JDM601_2386 c04a1c1c162806445702e0963804a5e7 184 Gene3D G3DSA:3.40.50.880 1 184 3.3E-58 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like JDM601_2386 c04a1c1c162806445702e0963804a5e7 184 Pfam PF01174 SNO glutamine amidotransferase family 1 179 2.6E-48 T 12-10-2018 IPR002161 Pyridoxal 5'-phosphate synthase subunit PdxT/SNO GO:0004359|GO:0042819|GO:0042823 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 JDM601_2386 c04a1c1c162806445702e0963804a5e7 184 ProSitePatterns PS01236 PdxT/SNO family family signature. 29 39 - T 12-10-2018 IPR021196 PdxT/SNO family, conserved site KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 JDM601_1307 382485b372da7ef82645ec4034da14de 549 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 366 375 - T 12-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 JDM601_1307 382485b372da7ef82645ec4034da14de 549 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 382 507 5.8E-48 T 12-10-2018 IPR000793 ATP synthase, alpha subunit, C-terminal GO:0015986 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 JDM601_1307 382485b372da7ef82645ec4034da14de 549 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 152 375 3.1E-69 T 12-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 JDM601_1307 382485b372da7ef82645ec4034da14de 549 Gene3D G3DSA:2.40.30.20 4 96 1.2E-29 T 12-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 JDM601_1307 382485b372da7ef82645ec4034da14de 549 PIRSF PIRSF039088 4 514 1.8E-232 T 12-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 JDM601_1307 382485b372da7ef82645ec4034da14de 549 SUPERFAMILY SSF52540 99 381 1.51E-96 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_1307 382485b372da7ef82645ec4034da14de 549 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 6 512 1.5E-251 T 12-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 JDM601_1307 382485b372da7ef82645ec4034da14de 549 SUPERFAMILY SSF50615 15 97 4.12E-25 T 12-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 JDM601_1307 382485b372da7ef82645ec4034da14de 549 Gene3D G3DSA:1.20.150.20 383 513 3.8E-51 T 12-10-2018 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 JDM601_1307 382485b372da7ef82645ec4034da14de 549 Gene3D G3DSA:3.40.50.300 97 382 4.0E-119 T 12-10-2018 JDM601_1307 382485b372da7ef82645ec4034da14de 549 SUPERFAMILY SSF47917 383 511 4.19E-46 T 12-10-2018 JDM601_1307 382485b372da7ef82645ec4034da14de 549 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 4 512 49.903 T 12-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 JDM601_1307 382485b372da7ef82645ec4034da14de 549 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 29 95 9.2E-17 T 12-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 JDM601_1836 fe8460c1b4d6fd1c8adfa887287d6a0a 399 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 8 16 - T 12-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 JDM601_1836 fe8460c1b4d6fd1c8adfa887287d6a0a 399 Pfam PF00764 Arginosuccinate synthase 6 391 4.3E-187 T 12-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 JDM601_1836 fe8460c1b4d6fd1c8adfa887287d6a0a 399 SUPERFAMILY SSF69864 172 396 4.84E-86 T 12-10-2018 JDM601_1836 fe8460c1b4d6fd1c8adfa887287d6a0a 399 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 117 128 - T 12-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 JDM601_1836 fe8460c1b4d6fd1c8adfa887287d6a0a 399 Hamap MF_00005 Argininosuccinate synthase [argG]. 2 397 51.647 T 12-10-2018 IPR023434 Argininosuccinate synthase, type 1 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 JDM601_1836 fe8460c1b4d6fd1c8adfa887287d6a0a 399 Gene3D G3DSA:3.40.50.620 1 174 2.7E-60 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JDM601_1836 fe8460c1b4d6fd1c8adfa887287d6a0a 399 SUPERFAMILY SSF52402 3 171 3.97E-41 T 12-10-2018 JDM601_1836 fe8460c1b4d6fd1c8adfa887287d6a0a 399 Gene3D G3DSA:3.90.1260.10 175 361 3.4E-73 T 12-10-2018 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 JDM601_1836 fe8460c1b4d6fd1c8adfa887287d6a0a 399 TIGRFAM TIGR00032 argG: argininosuccinate synthase 4 393 4.0E-145 T 12-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 JDM601_1836 fe8460c1b4d6fd1c8adfa887287d6a0a 399 Gene3D G3DSA:1.20.5.470 362 399 1.1E-23 T 12-10-2018 JDM601_3811 69dce7d579ee4d5ac2fd0c5325bdacd0 328 SUPERFAMILY SSF47203 190 311 2.26E-23 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 JDM601_3811 69dce7d579ee4d5ac2fd0c5325bdacd0 328 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 191 311 1.1E-13 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 JDM601_3811 69dce7d579ee4d5ac2fd0c5325bdacd0 328 Gene3D G3DSA:1.10.540.10 1 108 8.2E-14 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 JDM601_3811 69dce7d579ee4d5ac2fd0c5325bdacd0 328 SUPERFAMILY SSF56645 2 113 2.82E-10 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 JDM601_3811 69dce7d579ee4d5ac2fd0c5325bdacd0 328 Gene3D G3DSA:1.20.140.10 189 318 4.3E-23 T 12-10-2018 JDM601_3811 69dce7d579ee4d5ac2fd0c5325bdacd0 328 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 8 79 4.6E-7 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 JDM601_2951 2b14afbf7c08b1147937f5e2dc0011f1 344 Gene3D G3DSA:3.40.50.150 117 309 4.8E-23 T 12-10-2018 JDM601_2951 2b14afbf7c08b1147937f5e2dc0011f1 344 SUPERFAMILY SSF53335 101 295 5.77E-26 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JDM601_2951 2b14afbf7c08b1147937f5e2dc0011f1 344 Pfam PF13649 Methyltransferase domain 137 233 4.5E-11 T 12-10-2018 JDM601_2646 01049dc83e245aafcb2fc4c74f4978bc 285 PRINTS PR00733 Glycosyl hydrolase family 6 signature 144 157 2.8E-40 T 12-10-2018 IPR016288 1, 4-beta cellobiohydrolase GO:0004553|GO:0030245 JDM601_2646 01049dc83e245aafcb2fc4c74f4978bc 285 PRINTS PR00733 Glycosyl hydrolase family 6 signature 174 184 2.8E-40 T 12-10-2018 IPR016288 1, 4-beta cellobiohydrolase GO:0004553|GO:0030245 JDM601_2646 01049dc83e245aafcb2fc4c74f4978bc 285 PRINTS PR00733 Glycosyl hydrolase family 6 signature 17 36 2.8E-40 T 12-10-2018 IPR016288 1, 4-beta cellobiohydrolase GO:0004553|GO:0030245 JDM601_2646 01049dc83e245aafcb2fc4c74f4978bc 285 PRINTS PR00733 Glycosyl hydrolase family 6 signature 61 74 2.8E-40 T 12-10-2018 IPR016288 1, 4-beta cellobiohydrolase GO:0004553|GO:0030245 JDM601_2646 01049dc83e245aafcb2fc4c74f4978bc 285 PRINTS PR00733 Glycosyl hydrolase family 6 signature 204 217 2.8E-40 T 12-10-2018 IPR016288 1, 4-beta cellobiohydrolase GO:0004553|GO:0030245 JDM601_2646 01049dc83e245aafcb2fc4c74f4978bc 285 PRINTS PR00733 Glycosyl hydrolase family 6 signature 222 242 2.8E-40 T 12-10-2018 IPR016288 1, 4-beta cellobiohydrolase GO:0004553|GO:0030245 JDM601_2646 01049dc83e245aafcb2fc4c74f4978bc 285 PRINTS PR00733 Glycosyl hydrolase family 6 signature 246 260 2.8E-40 T 12-10-2018 IPR016288 1, 4-beta cellobiohydrolase GO:0004553|GO:0030245 JDM601_2646 01049dc83e245aafcb2fc4c74f4978bc 285 PRINTS PR00733 Glycosyl hydrolase family 6 signature 89 104 2.8E-40 T 12-10-2018 IPR016288 1, 4-beta cellobiohydrolase GO:0004553|GO:0030245 JDM601_2646 01049dc83e245aafcb2fc4c74f4978bc 285 ProSitePatterns PS00656 Glycosyl hydrolases family 6 signature 2. 106 115 - T 12-10-2018 IPR001524 Glycoside hydrolase, family 6, conserved site GO:0004553|GO:0005975 JDM601_2646 01049dc83e245aafcb2fc4c74f4978bc 285 Pfam PF01341 Glycosyl hydrolases family 6 11 268 4.7E-75 T 12-10-2018 IPR016288 1, 4-beta cellobiohydrolase GO:0004553|GO:0030245 JDM601_2646 01049dc83e245aafcb2fc4c74f4978bc 285 ProSitePatterns PS00655 Glycosyl hydrolases family 6 signature 1. 66 82 - T 12-10-2018 IPR001524 Glycoside hydrolase, family 6, conserved site GO:0004553|GO:0005975 JDM601_2646 01049dc83e245aafcb2fc4c74f4978bc 285 SUPERFAMILY SSF51989 2 284 1.31E-95 T 12-10-2018 IPR036434 1, 4-beta cellobiohydrolase superfamily GO:0004553|GO:0030245 JDM601_2646 01049dc83e245aafcb2fc4c74f4978bc 285 Gene3D G3DSA:3.20.20.40 2 285 1.3E-112 T 12-10-2018 IPR036434 1, 4-beta cellobiohydrolase superfamily GO:0004553|GO:0030245 JDM601_2646 01049dc83e245aafcb2fc4c74f4978bc 285 PIRSF PIRSF001100 2 285 2.2E-98 T 12-10-2018 IPR016288 1, 4-beta cellobiohydrolase GO:0004553|GO:0030245 JDM601_1352 aba1b8a1acc8e3b632cd86b362403e25 303 SMART SM00943 11 165 1.8E-33 T 12-10-2018 IPR015330 DNA primase/polymerase, bifunctional, N-terminal JDM601_1352 aba1b8a1acc8e3b632cd86b362403e25 303 Pfam PF09250 Bifunctional DNA primase/polymerase, N-terminal 11 164 1.3E-41 T 12-10-2018 IPR015330 DNA primase/polymerase, bifunctional, N-terminal JDM601_1352 aba1b8a1acc8e3b632cd86b362403e25 303 SUPERFAMILY SSF56747 9 168 3.4E-22 T 12-10-2018 JDM601_1134 e69620b98a8c87e1b57cb32e294fc0a8 343 Gene3D G3DSA:3.20.20.140 1 306 1.4E-78 T 12-10-2018 JDM601_1134 e69620b98a8c87e1b57cb32e294fc0a8 343 Pfam PF04909 Amidohydrolase 4 307 1.7E-35 T 12-10-2018 IPR006680 Amidohydrolase-related GO:0016787 JDM601_1134 e69620b98a8c87e1b57cb32e294fc0a8 343 SUPERFAMILY SSF51556 3 307 1.26E-71 T 12-10-2018 IPR032466 Metal-dependent hydrolase JDM601_3324 bfb5ba7f7a95cdaed75673bb8257ec3c 781 SUPERFAMILY SSF53649 31 569 2.62E-124 T 12-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 JDM601_3324 bfb5ba7f7a95cdaed75673bb8257ec3c 781 ProSitePatterns PS00523 Sulfatases signature 1. 75 87 - T 12-10-2018 IPR024607 Sulfatase, conserved site JDM601_3324 bfb5ba7f7a95cdaed75673bb8257ec3c 781 Gene3D G3DSA:3.40.720.10 29 487 6.8E-109 T 12-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 JDM601_3324 bfb5ba7f7a95cdaed75673bb8257ec3c 781 Gene3D G3DSA:3.30.1120.10 489 576 4.3E-19 T 12-10-2018 JDM601_3324 bfb5ba7f7a95cdaed75673bb8257ec3c 781 Pfam PF00884 Sulfatase 31 460 5.8E-92 T 12-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 JDM601_1432 a7485468c170095e825350d79548b70b 1620 SUPERFAMILY SSF53223 763 959 1.63E-20 T 12-10-2018 JDM601_1432 a7485468c170095e825350d79548b70b 1620 Pfam PF05088 Bacterial NAD-glutamate dehydrogenase 100 1608 0.0 T 12-10-2018 IPR028971 NAD-glutamate dehydrogenase GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 JDM601_1432 a7485468c170095e825350d79548b70b 1620 PIRSF PIRSF036761 10 1615 0.0 T 12-10-2018 IPR007780 NAD-glutamate dehydrogenase, bacteria GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 JDM601_1432 a7485468c170095e825350d79548b70b 1620 SUPERFAMILY SSF51735 948 1216 2.49E-28 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_2663 6f1f620eeeab29f7cd60ba94ceb6430a 201 TIGRFAM TIGR03424 urea_degr_1: urea carboxylase-associated protein 1 4 199 1.6E-100 T 12-10-2018 IPR017791 Urea carboxylase-associated protein 1 JDM601_2663 6f1f620eeeab29f7cd60ba94ceb6430a 201 Pfam PF09347 Domain of unknown function (DUF1989) 8 173 1.1E-59 T 12-10-2018 IPR018959 Protein of unknown function DUF1989 JDM601_1838 5f662ed16809b24b019b5c8a149c148c 159 Gene3D G3DSA:2.60.40.1240 29 159 4.4E-52 T 12-10-2018 IPR029050 Immunoprotective extracellular, immunoglobulin-like domain superfamily JDM601_1838 5f662ed16809b24b019b5c8a149c148c 159 ProDom PD886639 ANTIGEN IMMUNOGENIC EXTRACELLULAR MPT63 MPB63 PRECURSOR IMMUNOPROTECTIVE SIGNAL SEQUENCING DIRECT 49 157 1.0E-41 T 12-10-2018 IPR015250 MPT63-like GO:0005615 JDM601_1838 5f662ed16809b24b019b5c8a149c148c 159 SUPERFAMILY SSF81982 30 157 1.7E-48 T 12-10-2018 JDM601_1838 5f662ed16809b24b019b5c8a149c148c 159 Pfam PF09167 Domain of unknown function (DUF1942) 33 157 2.0E-51 T 12-10-2018 IPR015250 MPT63-like GO:0005615 JDM601_2421 fb7d5f4323f0e07d991439532b3c6a1c 139 SUPERFAMILY SSF53335 10 94 7.02E-18 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JDM601_2421 fb7d5f4323f0e07d991439532b3c6a1c 139 Gene3D G3DSA:3.40.50.150 12 116 7.2E-22 T 12-10-2018 JDM601_2421 fb7d5f4323f0e07d991439532b3c6a1c 139 Pfam PF05724 Thiopurine S-methyltransferase (TPMT) 28 95 1.2E-6 T 12-10-2018 IPR008854 TPMT family GO:0008757 KEGG: 00983+2.1.1.67|Reactome: R-HSA-156581|Reactome: R-HSA-5578995 JDM601_1985 31a03aa90dafe15779e765b11467667a 260 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 20 217 3.3E-48 T 12-10-2018 IPR006385 HAD-superfamily hydrolase, subfamily IB, SerB1-like JDM601_1985 31a03aa90dafe15779e765b11467667a 260 Gene3D G3DSA:3.40.50.1000 20 230 3.4E-50 T 12-10-2018 IPR023214 HAD superfamily JDM601_1985 31a03aa90dafe15779e765b11467667a 260 Gene3D G3DSA:1.20.1440.100 31 103 3.4E-50 T 12-10-2018 JDM601_1985 31a03aa90dafe15779e765b11467667a 260 Pfam PF12710 haloacid dehalogenase-like hydrolase 20 203 9.4E-29 T 12-10-2018 JDM601_1985 31a03aa90dafe15779e765b11467667a 260 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 20 206 1.5E-18 T 12-10-2018 JDM601_1985 31a03aa90dafe15779e765b11467667a 260 SUPERFAMILY SSF56784 19 216 5.42E-26 T 12-10-2018 IPR036412 HAD-like superfamily JDM601_1409 2db8cdc48069680b321b531fd9aef8f1 309 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 2 303 1.5E-68 T 12-10-2018 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0008677|GO:0015940 KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654 JDM601_1409 2db8cdc48069680b321b531fd9aef8f1 309 Gene3D G3DSA:1.10.1040.10 177 307 6.0E-31 T 12-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 JDM601_1409 2db8cdc48069680b321b531fd9aef8f1 309 SUPERFAMILY SSF51735 1 165 5.61E-20 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_1409 2db8cdc48069680b321b531fd9aef8f1 309 Pfam PF02558 Ketopantoate reductase PanE/ApbA 3 150 3.9E-37 T 12-10-2018 IPR013332 Ketopantoate reductase, N-terminal domain JDM601_1409 2db8cdc48069680b321b531fd9aef8f1 309 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 177 301 4.5E-28 T 12-10-2018 IPR013752 Ketopantoate reductase, C-terminal domain JDM601_1409 2db8cdc48069680b321b531fd9aef8f1 309 Gene3D G3DSA:3.40.50.720 1 175 2.1E-44 T 12-10-2018 JDM601_1409 2db8cdc48069680b321b531fd9aef8f1 309 SUPERFAMILY SSF48179 177 302 1.22E-27 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 JDM601_0065 899ccee383e0ad5f3ece1f1cf8db0c96 161 SUPERFAMILY SSF54427 59 160 4.54E-9 T 12-10-2018 IPR032710 NTF2-like domain superfamily JDM601_3517 d7f91410118366369d413c7696f3ff88 479 ProSitePatterns PS00455 Putative AMP-binding domain signature. 136 147 - T 12-10-2018 IPR020845 AMP-binding, conserved site JDM601_3517 d7f91410118366369d413c7696f3ff88 479 Gene3D G3DSA:3.40.50.12780 5 378 1.7E-100 T 12-10-2018 JDM601_3517 d7f91410118366369d413c7696f3ff88 479 Gene3D G3DSA:3.30.300.30 379 476 2.2E-31 T 12-10-2018 JDM601_3517 d7f91410118366369d413c7696f3ff88 479 Pfam PF00501 AMP-binding enzyme 12 384 1.6E-83 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 JDM601_3517 d7f91410118366369d413c7696f3ff88 479 SUPERFAMILY SSF56801 11 475 3.01E-132 T 12-10-2018 JDM601_3517 d7f91410118366369d413c7696f3ff88 479 Pfam PF13193 AMP-binding enzyme C-terminal domain 392 465 2.2E-20 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain JDM601_2642 eb7909ff34387af9442c24100a3d9a88 234 SUPERFAMILY SSF51735 1 230 7.06E-49 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_2642 eb7909ff34387af9442c24100a3d9a88 234 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 125 153 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 JDM601_2642 eb7909ff34387af9442c24100a3d9a88 234 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 157 3.5E-10 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2642 eb7909ff34387af9442c24100a3d9a88 234 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 118 126 3.5E-10 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2642 eb7909ff34387af9442c24100a3d9a88 234 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 51 62 3.5E-10 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2642 eb7909ff34387af9442c24100a3d9a88 234 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 1 229 5.8E-41 T 12-10-2018 JDM601_2642 eb7909ff34387af9442c24100a3d9a88 234 Gene3D G3DSA:3.40.50.720 1 233 9.6E-61 T 12-10-2018 JDM601_2642 eb7909ff34387af9442c24100a3d9a88 234 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 138 157 3.1E-24 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2642 eb7909ff34387af9442c24100a3d9a88 234 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 51 62 3.1E-24 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2642 eb7909ff34387af9442c24100a3d9a88 234 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 112 128 3.1E-24 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2642 eb7909ff34387af9442c24100a3d9a88 234 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 195 215 3.1E-24 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2642 eb7909ff34387af9442c24100a3d9a88 234 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 176 3.1E-24 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3971 a771fb0589d54f6e11d8a8a1e373e96d 321 PIRSF PIRSF002849 8 321 8.0E-131 T 12-10-2018 JDM601_3971 a771fb0589d54f6e11d8a8a1e373e96d 321 SUPERFAMILY SSF52540 11 292 6.84E-45 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_3971 a771fb0589d54f6e11d8a8a1e373e96d 321 Gene3D G3DSA:1.10.8.300 209 316 1.3E-32 T 12-10-2018 JDM601_3971 a771fb0589d54f6e11d8a8a1e373e96d 321 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 44 174 4.2E-62 T 12-10-2018 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 JDM601_3971 a771fb0589d54f6e11d8a8a1e373e96d 321 Gene3D G3DSA:3.40.50.300 9 204 6.2E-47 T 12-10-2018 JDM601_1460 90c76acadeb85c3506404fb41a06f93a 470 Pfam PF08245 Mur ligase middle domain 60 297 6.0E-17 T 12-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 JDM601_1460 90c76acadeb85c3506404fb41a06f93a 470 ProSitePatterns PS01012 Folylpolyglutamate synthase signature 2. 160 175 - T 12-10-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 JDM601_1460 90c76acadeb85c3506404fb41a06f93a 470 Pfam PF02875 Mur ligase family, glutamate ligase domain 324 400 8.0E-9 T 12-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 JDM601_1460 90c76acadeb85c3506404fb41a06f93a 470 Gene3D G3DSA:3.90.190.20 325 470 1.1E-31 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 JDM601_1460 90c76acadeb85c3506404fb41a06f93a 470 SUPERFAMILY SSF53623 19 322 1.02E-81 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 JDM601_1460 90c76acadeb85c3506404fb41a06f93a 470 PIRSF PIRSF001563 13 469 3.1E-107 T 12-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 JDM601_1460 90c76acadeb85c3506404fb41a06f93a 470 Gene3D G3DSA:3.40.1190.10 13 324 2.9E-99 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 JDM601_1460 90c76acadeb85c3506404fb41a06f93a 470 TIGRFAM TIGR01499 folC: bifunctional protein FolC 38 463 1.3E-90 T 12-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 JDM601_1460 90c76acadeb85c3506404fb41a06f93a 470 SUPERFAMILY SSF53244 325 467 2.01E-24 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 JDM601_4069 5201b9ccf95770ac1ec06e52ac4f1e48 165 SMART SM00530 22 77 0.0015 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 JDM601_4069 5201b9ccf95770ac1ec06e52ac4f1e48 165 Gene3D G3DSA:1.10.260.40 11 79 2.8E-9 T 12-10-2018 JDM601_4069 5201b9ccf95770ac1ec06e52ac4f1e48 165 Pfam PF13560 Helix-turn-helix domain 18 73 1.5E-7 T 12-10-2018 JDM601_4069 5201b9ccf95770ac1ec06e52ac4f1e48 165 SUPERFAMILY SSF47413 13 74 1.72E-8 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 JDM601_1579 84727cb79bb9a6967977eb698385f93b 378 Pfam PF13449 Esterase-like activity of phytase 48 362 1.7E-83 T 12-10-2018 IPR027372 Phytase-like domain JDM601_1579 84727cb79bb9a6967977eb698385f93b 378 SUPERFAMILY SSF50956 47 215 2.22E-7 T 12-10-2018 JDM601_3065 f67fdd2ac57a843098f17770e6ce3614 293 Pfam PF14417 MEDS: MEthanogen/methylotroph, DcmR Sensory domain 15 170 3.0E-19 T 12-10-2018 IPR025847 MEDS domain JDM601_3065 f67fdd2ac57a843098f17770e6ce3614 293 SUPERFAMILY SSF52091 191 272 2.75E-6 T 12-10-2018 IPR036513 STAS domain superfamily JDM601_1575 1b6a010156a6f8b088813d96be59120a 631 SUPERFAMILY SSF57783 4 99 2.21E-32 T 12-10-2018 JDM601_1575 1b6a010156a6f8b088813d96be59120a 631 Pfam PF08278 DNA primase DnaG DnaB-binding 479 606 2.1E-29 T 12-10-2018 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 JDM601_1575 1b6a010156a6f8b088813d96be59120a 631 Gene3D G3DSA:3.40.1360.10 245 375 2.8E-33 T 12-10-2018 JDM601_1575 1b6a010156a6f8b088813d96be59120a 631 PIRSF PIRSF002811 3 618 3.2E-142 T 12-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 JDM601_1575 1b6a010156a6f8b088813d96be59120a 631 SUPERFAMILY SSF56731 118 433 4.97E-93 T 12-10-2018 JDM601_1575 1b6a010156a6f8b088813d96be59120a 631 Pfam PF01807 CHC2 zinc finger 6 100 1.1E-34 T 12-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 JDM601_1575 1b6a010156a6f8b088813d96be59120a 631 SMART SM00493 263 341 3.3E-14 T 12-10-2018 IPR006171 TOPRIM domain JDM601_1575 1b6a010156a6f8b088813d96be59120a 631 Pfam PF13662 Toprim domain 264 338 1.6E-13 T 12-10-2018 IPR006171 TOPRIM domain JDM601_1575 1b6a010156a6f8b088813d96be59120a 631 Pfam PF10410 DnaB-helicase binding domain of primase 377 431 4.6E-19 T 12-10-2018 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 JDM601_1575 1b6a010156a6f8b088813d96be59120a 631 Gene3D G3DSA:3.90.980.10 112 244 7.0E-34 T 12-10-2018 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily JDM601_1575 1b6a010156a6f8b088813d96be59120a 631 Pfam PF08275 DNA primase catalytic core, N-terminal domain 128 255 3.1E-35 T 12-10-2018 IPR013264 DNA primase, catalytic core, N-terminal JDM601_1575 1b6a010156a6f8b088813d96be59120a 631 SMART SM00400 37 91 1.5E-33 T 12-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 JDM601_1575 1b6a010156a6f8b088813d96be59120a 631 Hamap MF_00974 DNA primase [dnaG]. 4 612 25.75 T 12-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 JDM601_1575 1b6a010156a6f8b088813d96be59120a 631 TIGRFAM TIGR01391 dnaG: DNA primase 5 424 1.3E-112 T 12-10-2018 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 JDM601_1575 1b6a010156a6f8b088813d96be59120a 631 SMART SM00766 478 607 1.2E-29 T 12-10-2018 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 JDM601_1575 1b6a010156a6f8b088813d96be59120a 631 Gene3D G3DSA:3.90.580.10 2 101 5.2E-36 T 12-10-2018 IPR036977 DNA Primase, CHC2-type zinc finger GO:0003677|GO:0006260|GO:0008270 JDM601_4235 617cdf122f38d370bd0495dc38e2c3e4 402 SUPERFAMILY SSF140459 2 173 7.59E-58 T 12-10-2018 JDM601_4235 617cdf122f38d370bd0495dc38e2c3e4 402 Pfam PF00823 PPE family 5 161 3.6E-56 T 12-10-2018 IPR000030 PPE family JDM601_4235 617cdf122f38d370bd0495dc38e2c3e4 402 Gene3D G3DSA:1.20.1260.20 1 174 4.6E-61 T 12-10-2018 IPR038332 PPE superfamily JDM601_4235 617cdf122f38d370bd0495dc38e2c3e4 402 Pfam PF12484 Polymorphic PE/PPE proteins C terminal 319 398 9.7E-16 T 12-10-2018 IPR022171 PPE family, C-terminal JDM601_3822 0705fbe61845132949d57dffcb6dd110 496 SUPERFAMILY SSF53720 18 450 1.1E-103 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 JDM601_3822 0705fbe61845132949d57dffcb6dd110 496 Gene3D G3DSA:3.40.309.10 229 428 3.4E-133 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 JDM601_3822 0705fbe61845132949d57dffcb6dd110 496 PIRSF PIRSF036492 5 493 4.3E-139 T 12-10-2018 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent GO:0006081|GO:0055114 JDM601_3822 0705fbe61845132949d57dffcb6dd110 496 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 253 264 - T 12-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 JDM601_3822 0705fbe61845132949d57dffcb6dd110 496 Pfam PF00171 Aldehyde dehydrogenase family 13 448 5.3E-80 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 JDM601_3822 0705fbe61845132949d57dffcb6dd110 496 Gene3D G3DSA:3.40.605.10 29 448 3.4E-133 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 JDM601_3822 0705fbe61845132949d57dffcb6dd110 496 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 225 232 - T 12-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 JDM601_4209 95c7d96a85515305226c7a6d0af83017 197 SUPERFAMILY SSF46689 12 74 2.05E-9 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JDM601_4209 95c7d96a85515305226c7a6d0af83017 197 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 47 9.6E-5 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_4209 95c7d96a85515305226c7a6d0af83017 197 Gene3D G3DSA:1.10.357.10 5 179 6.3E-16 T 12-10-2018 JDM601_1709 878d873e37fca4cd75ef9a1653ae6589 280 SUPERFAMILY SSF46626 29 142 5.15E-19 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 JDM601_1709 878d873e37fca4cd75ef9a1653ae6589 280 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 164 235 1.5E-10 T 12-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 JDM601_1709 878d873e37fca4cd75ef9a1653ae6589 280 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 61 136 1.2E-6 T 12-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 JDM601_1709 878d873e37fca4cd75ef9a1653ae6589 280 Gene3D G3DSA:1.10.760.10 61 141 3.3E-11 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 JDM601_1709 878d873e37fca4cd75ef9a1653ae6589 280 Gene3D G3DSA:1.10.760.10 161 243 9.3E-13 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 JDM601_1709 878d873e37fca4cd75ef9a1653ae6589 280 SUPERFAMILY SSF46626 144 236 4.51E-26 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 JDM601_1709 878d873e37fca4cd75ef9a1653ae6589 280 PIRSF PIRSF000007 3 280 8.4E-140 T 12-10-2018 IPR009152 Cytochrome bc1 complex, cytochrome c subunit GO:0005506|GO:0009055|GO:0016021|GO:0020037 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 JDM601_0183 a5aadcda638c7ce833f82f56de3d44a9 386 SUPERFAMILY SSF47203 216 369 5.9E-10 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 JDM601_0183 a5aadcda638c7ce833f82f56de3d44a9 386 Gene3D G3DSA:1.10.540.10 5 105 7.8E-15 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 JDM601_0183 a5aadcda638c7ce833f82f56de3d44a9 386 Gene3D G3DSA:2.40.110.10 110 220 3.9E-38 T 12-10-2018 JDM601_0183 a5aadcda638c7ce833f82f56de3d44a9 386 SUPERFAMILY SSF56645 8 228 8.12E-63 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 JDM601_0183 a5aadcda638c7ce833f82f56de3d44a9 386 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 216 367 1.3E-10 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 JDM601_0183 a5aadcda638c7ce833f82f56de3d44a9 386 Gene3D G3DSA:1.20.140.10 221 373 3.5E-24 T 12-10-2018 JDM601_0183 a5aadcda638c7ce833f82f56de3d44a9 386 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 10 106 5.4E-10 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 JDM601_0183 a5aadcda638c7ce833f82f56de3d44a9 386 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 110 194 9.5E-22 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 JDM601_2406 81008a7982f3e5c4c52307b70a77e473 74 Pfam PF00037 4Fe-4S binding domain 1 16 8.4E-5 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain JDM601_2406 81008a7982f3e5c4c52307b70a77e473 74 Gene3D G3DSA:3.30.70.20 1 74 2.5E-18 T 12-10-2018 JDM601_2406 81008a7982f3e5c4c52307b70a77e473 74 SUPERFAMILY SSF54862 2 44 7.68E-8 T 12-10-2018 JDM601_2156 87f0e72fc8f9d87a1eb30313e2ebcceb 80 ProDom PD028237 MB1616 ML1221 CGL0073 RV1590/MT1625 15 77 6.0E-22 T 12-10-2018 JDM601_0353 f00f50c494036bbf8a2bec165c776feb 222 Pfam PF00588 SpoU rRNA Methylase family 73 209 1.5E-24 T 12-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 JDM601_0353 f00f50c494036bbf8a2bec165c776feb 222 SUPERFAMILY SSF75217 58 216 2.88E-36 T 12-10-2018 IPR029028 Alpha/beta knot methyltransferases JDM601_0353 f00f50c494036bbf8a2bec165c776feb 222 Gene3D G3DSA:3.40.1280.10 57 221 1.9E-31 T 12-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal JDM601_4008 a24ce3615bc68d0b0fc81e2602198242 407 Pfam PF01494 FAD binding domain 8 348 7.9E-66 T 12-10-2018 IPR002938 FAD-binding domain GO:0071949 JDM601_4008 a24ce3615bc68d0b0fc81e2602198242 407 Gene3D G3DSA:3.50.50.60 5 366 7.7E-61 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_4008 a24ce3615bc68d0b0fc81e2602198242 407 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 9 31 4.0E-20 T 12-10-2018 JDM601_4008 a24ce3615bc68d0b0fc81e2602198242 407 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 300 316 4.0E-20 T 12-10-2018 JDM601_4008 a24ce3615bc68d0b0fc81e2602198242 407 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 159 174 4.0E-20 T 12-10-2018 JDM601_4008 a24ce3615bc68d0b0fc81e2602198242 407 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 285 300 4.0E-20 T 12-10-2018 JDM601_4008 a24ce3615bc68d0b0fc81e2602198242 407 SUPERFAMILY SSF51905 9 362 2.9E-57 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_0301 517350b0e8c16b9795eab2ac36980ace 394 Gene3D G3DSA:3.40.50.1820 117 390 8.2E-31 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_0301 517350b0e8c16b9795eab2ac36980ace 394 SUPERFAMILY SSF53474 155 392 8.98E-36 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_0301 517350b0e8c16b9795eab2ac36980ace 394 Pfam PF12146 Serine aminopeptidase, S33 163 299 1.7E-6 T 12-10-2018 IPR022742 Serine aminopeptidase, S33 JDM601_3899 f4f30c199d3615f667bf87fb027302ed 788 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 128 617 3.2E-228 T 12-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 JDM601_3899 f4f30c199d3615f667bf87fb027302ed 788 Pfam PF01434 Peptidase family M41 409 616 1.4E-78 T 12-10-2018 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 JDM601_3899 f4f30c199d3615f667bf87fb027302ed 788 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 5 623 35.971 T 12-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 JDM601_3899 f4f30c199d3615f667bf87fb027302ed 788 ProSitePatterns PS00674 AAA-protein family signature. 317 335 - T 12-10-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 JDM601_3899 f4f30c199d3615f667bf87fb027302ed 788 Gene3D G3DSA:1.20.58.760 428 628 3.8E-69 T 12-10-2018 JDM601_3899 f4f30c199d3615f667bf87fb027302ed 788 Gene3D G3DSA:3.40.50.300 166 346 2.4E-68 T 12-10-2018 JDM601_3899 f4f30c199d3615f667bf87fb027302ed 788 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 214 345 1.8E-45 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 JDM601_3899 f4f30c199d3615f667bf87fb027302ed 788 SUPERFAMILY SSF140990 428 621 3.14E-68 T 12-10-2018 IPR037219 Peptidase M41-like GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 JDM601_3899 f4f30c199d3615f667bf87fb027302ed 788 SUPERFAMILY SSF52540 170 418 1.67E-70 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_3899 f4f30c199d3615f667bf87fb027302ed 788 SMART SM00382 210 349 4.8E-26 T 12-10-2018 IPR003593 AAA+ ATPase domain JDM601_3899 f4f30c199d3615f667bf87fb027302ed 788 Gene3D G3DSA:1.10.8.60 348 425 1.2E-23 T 12-10-2018 JDM601_3181 297cd5b91796e3fd7a95861ae43a1080 387 Gene3D G3DSA:3.40.50.1980 92 195 2.1E-10 T 12-10-2018 JDM601_3181 297cd5b91796e3fd7a95861ae43a1080 387 SUPERFAMILY SSF53807 98 373 6.28E-33 T 12-10-2018 JDM601_3181 297cd5b91796e3fd7a95861ae43a1080 387 Gene3D G3DSA:3.40.50.1980 205 352 2.1E-9 T 12-10-2018 JDM601_3181 297cd5b91796e3fd7a95861ae43a1080 387 Pfam PF01497 Periplasmic binding protein 111 338 2.4E-24 T 12-10-2018 IPR002491 ABC transporter periplasmic binding domain JDM601_0233 cb48555761e54732abb62efa1e59a2de 333 SUPERFAMILY SSF51430 2 310 2.1E-94 T 12-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily JDM601_0233 cb48555761e54732abb62efa1e59a2de 333 Pfam PF00248 Aldo/keto reductase family 16 310 8.7E-77 T 12-10-2018 IPR023210 NADP-dependent oxidoreductase domain JDM601_0233 cb48555761e54732abb62efa1e59a2de 333 Gene3D G3DSA:3.20.20.100 2 319 1.8E-105 T 12-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily JDM601_0233 cb48555761e54732abb62efa1e59a2de 333 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 141 158 - T 12-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 JDM601_0165 2e480bba4b6628736034412accd03b35 972 SUPERFAMILY SSF82866 460 680 1.96E-27 T 12-10-2018 JDM601_0165 2e480bba4b6628736034412accd03b35 972 SUPERFAMILY SSF82866 112 315 4.97E-26 T 12-10-2018 JDM601_0165 2e480bba4b6628736034412accd03b35 972 Pfam PF03176 MMPL family 418 680 1.3E-35 T 12-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 JDM601_0165 2e480bba4b6628736034412accd03b35 972 Pfam PF03176 MMPL family 125 346 9.3E-37 T 12-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 JDM601_1658 26a99d78299e2947d48b9668ddf64c50 153 SUPERFAMILY SSF52833 1 152 8.73E-38 T 12-10-2018 IPR036249 Thioredoxin-like superfamily JDM601_1658 26a99d78299e2947d48b9668ddf64c50 153 Pfam PF00578 AhpC/TSA family 4 129 2.5E-32 T 12-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 JDM601_1658 26a99d78299e2947d48b9668ddf64c50 153 PIRSF PIRSF000239 1 153 2.5E-22 T 12-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 JDM601_1658 26a99d78299e2947d48b9668ddf64c50 153 Gene3D G3DSA:3.40.30.10 1 152 6.0E-46 T 12-10-2018 JDM601_1967 b5c087a511cebd20207a82ccab1f7d22 160 Pfam PF00210 Ferritin-like domain 9 143 1.4E-36 T 12-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 JDM601_1967 b5c087a511cebd20207a82ccab1f7d22 160 Gene3D G3DSA:1.20.1260.10 1 160 7.5E-68 T 12-10-2018 IPR012347 Ferritin-like JDM601_1967 b5c087a511cebd20207a82ccab1f7d22 160 SUPERFAMILY SSF47240 1 151 2.84E-46 T 12-10-2018 IPR009078 Ferritin-like superfamily JDM601_1967 b5c087a511cebd20207a82ccab1f7d22 160 PRINTS PR00601 Bacterioferritin signature 3 22 3.2E-61 T 12-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 JDM601_1967 b5c087a511cebd20207a82ccab1f7d22 160 PRINTS PR00601 Bacterioferritin signature 65 85 3.2E-61 T 12-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 JDM601_1967 b5c087a511cebd20207a82ccab1f7d22 160 PRINTS PR00601 Bacterioferritin signature 107 127 3.2E-61 T 12-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 JDM601_1967 b5c087a511cebd20207a82ccab1f7d22 160 PRINTS PR00601 Bacterioferritin signature 23 43 3.2E-61 T 12-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 JDM601_1967 b5c087a511cebd20207a82ccab1f7d22 160 PRINTS PR00601 Bacterioferritin signature 86 106 3.2E-61 T 12-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 JDM601_1967 b5c087a511cebd20207a82ccab1f7d22 160 PRINTS PR00601 Bacterioferritin signature 44 64 3.2E-61 T 12-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 JDM601_1967 b5c087a511cebd20207a82ccab1f7d22 160 PRINTS PR00601 Bacterioferritin signature 128 149 3.2E-61 T 12-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 JDM601_1967 b5c087a511cebd20207a82ccab1f7d22 160 TIGRFAM TIGR00754 bfr: bacterioferritin 1 156 1.0E-71 T 12-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 JDM601_1967 b5c087a511cebd20207a82ccab1f7d22 160 PIRSF PIRSF002560 1 157 1.8E-62 T 12-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 JDM601_1967 b5c087a511cebd20207a82ccab1f7d22 160 ProSitePatterns PS00549 Bacterioferritin signature. 1 19 - T 12-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 JDM601_3496 152c9da1899d4e36290b301113d344bf 400 SUPERFAMILY SSF48264 12 400 1.96E-85 T 12-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_3496 152c9da1899d4e36290b301113d344bf 400 Gene3D G3DSA:1.10.630.10 2 400 6.7E-118 T 12-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_3496 152c9da1899d4e36290b301113d344bf 400 PRINTS PR00359 B-class P450 signature 145 160 2.3E-48 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3496 152c9da1899d4e36290b301113d344bf 400 PRINTS PR00359 B-class P450 signature 186 208 2.3E-48 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3496 152c9da1899d4e36290b301113d344bf 400 PRINTS PR00359 B-class P450 signature 317 332 2.3E-48 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3496 152c9da1899d4e36290b301113d344bf 400 PRINTS PR00359 B-class P450 signature 349 360 2.3E-48 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3496 152c9da1899d4e36290b301113d344bf 400 PRINTS PR00359 B-class P450 signature 83 94 2.3E-48 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3496 152c9da1899d4e36290b301113d344bf 400 PRINTS PR00359 B-class P450 signature 272 283 2.3E-48 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3496 152c9da1899d4e36290b301113d344bf 400 PRINTS PR00359 B-class P450 signature 289 316 2.3E-48 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3496 152c9da1899d4e36290b301113d344bf 400 PRINTS PR00359 B-class P450 signature 340 349 2.3E-48 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3496 152c9da1899d4e36290b301113d344bf 400 PRINTS PR00359 B-class P450 signature 128 144 2.3E-48 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3496 152c9da1899d4e36290b301113d344bf 400 Pfam PF00067 Cytochrome P450 271 368 2.1E-16 T 12-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_1088 16335c30a489b83373c6eb2c2c73f331 215 Gene3D G3DSA:3.40.50.720 1 214 1.0E-46 T 12-10-2018 JDM601_1088 16335c30a489b83373c6eb2c2c73f331 215 Pfam PF13460 NAD(P)H-binding 4 192 9.9E-47 T 12-10-2018 IPR016040 NAD(P)-binding domain JDM601_1088 16335c30a489b83373c6eb2c2c73f331 215 SUPERFAMILY SSF51735 1 206 1.16E-35 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_1287 fd4eaa71621730f2d09c6a998498ab3b 373 SUPERFAMILY SSF140459 3 175 4.45E-60 T 12-10-2018 JDM601_1287 fd4eaa71621730f2d09c6a998498ab3b 373 Pfam PF00823 PPE family 7 162 3.1E-58 T 12-10-2018 IPR000030 PPE family JDM601_1287 fd4eaa71621730f2d09c6a998498ab3b 373 Pfam PF12484 Polymorphic PE/PPE proteins C terminal 280 369 1.1E-13 T 12-10-2018 IPR022171 PPE family, C-terminal JDM601_1287 fd4eaa71621730f2d09c6a998498ab3b 373 Gene3D G3DSA:1.20.1260.20 2 175 2.6E-63 T 12-10-2018 IPR038332 PPE superfamily JDM601_1772 54c60501836149ad7d44aaface2e9d33 411 Gene3D G3DSA:1.20.120.640 329 411 3.7E-30 T 12-10-2018 JDM601_1772 54c60501836149ad7d44aaface2e9d33 411 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 76 85 6.9E-25 T 12-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 JDM601_1772 54c60501836149ad7d44aaface2e9d33 411 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 40 51 6.9E-25 T 12-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 JDM601_1772 54c60501836149ad7d44aaface2e9d33 411 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 243 264 6.9E-25 T 12-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 JDM601_1772 54c60501836149ad7d44aaface2e9d33 411 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 212 230 6.9E-25 T 12-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 JDM601_1772 54c60501836149ad7d44aaface2e9d33 411 SUPERFAMILY SSF52374 27 335 6.66E-67 T 12-10-2018 JDM601_1772 54c60501836149ad7d44aaface2e9d33 411 Gene3D G3DSA:3.40.50.620 1 327 1.6E-102 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JDM601_1772 54c60501836149ad7d44aaface2e9d33 411 TIGRFAM TIGR03447 mycothiol_MshC: cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside ligase 2 411 2.9E-213 T 12-10-2018 IPR017812 Mycothiol ligase MshC GO:0010125|GO:0035446 JDM601_1772 54c60501836149ad7d44aaface2e9d33 411 Hamap MF_01697 L-cysteine:1D-myo-inositol 2-amino-2-deoxy-alpha-D-glucopyranoside ligase [mshC]. 9 411 53.088 T 12-10-2018 IPR017812 Mycothiol ligase MshC GO:0010125|GO:0035446 JDM601_1772 54c60501836149ad7d44aaface2e9d33 411 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 37 335 1.1E-81 T 12-10-2018 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 JDM601_4154 33a18a3c16777ccd72ca9a18bcbdf621 179 SUPERFAMILY SSF47240 8 154 1.61E-41 T 12-10-2018 IPR009078 Ferritin-like superfamily JDM601_4154 33a18a3c16777ccd72ca9a18bcbdf621 179 Pfam PF00210 Ferritin-like domain 13 145 7.9E-32 T 12-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 JDM601_4154 33a18a3c16777ccd72ca9a18bcbdf621 179 Gene3D G3DSA:1.20.1260.10 1 179 2.1E-50 T 12-10-2018 IPR012347 Ferritin-like JDM601_3380 b10df3d5b3e6ac93956f4b67dfbc04cc 279 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 195 212 5.2E-23 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3380 b10df3d5b3e6ac93956f4b67dfbc04cc 279 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 5.2E-23 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3380 b10df3d5b3e6ac93956f4b67dfbc04cc 279 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 193 5.2E-23 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3380 b10df3d5b3e6ac93956f4b67dfbc04cc 279 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 114 130 5.2E-23 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3380 b10df3d5b3e6ac93956f4b67dfbc04cc 279 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 76 87 5.2E-23 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3380 b10df3d5b3e6ac93956f4b67dfbc04cc 279 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 228 248 5.2E-23 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3380 b10df3d5b3e6ac93956f4b67dfbc04cc 279 SUPERFAMILY SSF51735 3 267 2.52E-44 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_3380 b10df3d5b3e6ac93956f4b67dfbc04cc 279 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 172 264 2.7E-14 T 12-10-2018 JDM601_3380 b10df3d5b3e6ac93956f4b67dfbc04cc 279 Pfam PF00106 short chain dehydrogenase 5 131 5.1E-17 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3380 b10df3d5b3e6ac93956f4b67dfbc04cc 279 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 186 1.2E-4 T 12-10-2018 JDM601_3714 e5e4b900d329161e9f6ae950152888ed 195 Gene3D G3DSA:1.10.10.60 1 43 6.2E-21 T 12-10-2018 JDM601_3714 e5e4b900d329161e9f6ae950152888ed 195 SUPERFAMILY SSF48498 74 187 2.06E-20 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily JDM601_3714 e5e4b900d329161e9f6ae950152888ed 195 Gene3D G3DSA:1.10.357.10 44 190 2.0E-39 T 12-10-2018 JDM601_3714 e5e4b900d329161e9f6ae950152888ed 195 SUPERFAMILY SSF46689 3 78 1.28E-19 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JDM601_3714 e5e4b900d329161e9f6ae950152888ed 195 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 28 51 6.3E-10 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_3714 e5e4b900d329161e9f6ae950152888ed 195 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 7 20 6.3E-10 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_3714 e5e4b900d329161e9f6ae950152888ed 195 Pfam PF00440 Bacterial regulatory proteins, tetR family 7 53 1.1E-17 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_1055 4911ed9461862ca83e456122edfc84e5 349 SUPERFAMILY SSF51735 3 301 3.27E-52 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_1055 4911ed9461862ca83e456122edfc84e5 349 Pfam PF01370 NAD dependent epimerase/dehydratase family 4 171 3.2E-23 T 12-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 JDM601_1055 4911ed9461862ca83e456122edfc84e5 349 Gene3D G3DSA:3.40.50.720 2 304 2.2E-57 T 12-10-2018 JDM601_0256 fe81265f9373529ea7a13d7bfdf0908d 568 SUPERFAMILY SSF56801 34 524 2.75E-90 T 12-10-2018 JDM601_0256 fe81265f9373529ea7a13d7bfdf0908d 568 Pfam PF00501 AMP-binding enzyme 35 425 1.0E-56 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 JDM601_0256 fe81265f9373529ea7a13d7bfdf0908d 568 Gene3D G3DSA:3.30.300.310 421 525 2.4E-14 T 12-10-2018 JDM601_0256 fe81265f9373529ea7a13d7bfdf0908d 568 ProSitePatterns PS00455 Putative AMP-binding domain signature. 171 182 - T 12-10-2018 IPR020845 AMP-binding, conserved site JDM601_0256 fe81265f9373529ea7a13d7bfdf0908d 568 Pfam PF13193 AMP-binding enzyme C-terminal domain 435 511 6.3E-6 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain JDM601_0256 fe81265f9373529ea7a13d7bfdf0908d 568 Gene3D G3DSA:3.40.50.12780 17 418 1.5E-68 T 12-10-2018 JDM601_1091 df2aab9d769fcd61189a0acdf13cba27 292 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 194 211 2.6E-19 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_1091 df2aab9d769fcd61189a0acdf13cba27 292 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 2.6E-19 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_1091 df2aab9d769fcd61189a0acdf13cba27 292 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 95 106 2.6E-19 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_1091 df2aab9d769fcd61189a0acdf13cba27 292 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 246 266 2.6E-19 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_1091 df2aab9d769fcd61189a0acdf13cba27 292 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 192 2.6E-19 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_1091 df2aab9d769fcd61189a0acdf13cba27 292 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 139 155 2.6E-19 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_1091 df2aab9d769fcd61189a0acdf13cba27 292 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 281 6.8E-32 T 12-10-2018 JDM601_1091 df2aab9d769fcd61189a0acdf13cba27 292 Gene3D G3DSA:3.40.50.720 1 286 2.8E-66 T 12-10-2018 JDM601_1091 df2aab9d769fcd61189a0acdf13cba27 292 TIGRFAM TIGR03971 SDR_subfam_1: SDR family mycofactocin-dependent oxidoreductase 5 284 1.5E-100 T 12-10-2018 IPR023985 Mycofactocin-dependent oxidoreductase JDM601_1091 df2aab9d769fcd61189a0acdf13cba27 292 SUPERFAMILY SSF51735 1 284 2.15E-51 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_2681 dc173c59421874d28c7b161d3d14574f 92 Gene3D G3DSA:3.30.70.100 1 89 9.3E-23 T 12-10-2018 JDM601_2681 dc173c59421874d28c7b161d3d14574f 92 Pfam PF07045 Domain of unknown function (DUF1330) 1 91 2.0E-26 T 12-10-2018 IPR010753 Domain of unknown function DUF1330 JDM601_2681 dc173c59421874d28c7b161d3d14574f 92 SUPERFAMILY SSF54909 1 91 2.25E-23 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel JDM601_1502 252bc91bf71eb6eebcd24513a27257ae 320 Pfam PF06144 DNA polymerase III, delta subunit 9 170 8.7E-7 T 12-10-2018 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 JDM601_1502 252bc91bf71eb6eebcd24513a27257ae 320 SUPERFAMILY SSF52540 3 181 1.3E-5 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_1502 252bc91bf71eb6eebcd24513a27257ae 320 SUPERFAMILY SSF48019 200 315 2.55E-11 T 12-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 JDM601_1502 252bc91bf71eb6eebcd24513a27257ae 320 Gene3D G3DSA:1.20.272.10 196 317 1.9E-13 T 12-10-2018 JDM601_1502 252bc91bf71eb6eebcd24513a27257ae 320 Gene3D G3DSA:3.40.50.300 2 122 8.5E-11 T 12-10-2018 JDM601_2365 98032b43f070e23bf625c2588b2b90b2 113 SUPERFAMILY SSF110857 5 112 2.22E-13 T 12-10-2018 IPR036568 Gamma-glutamyl cyclotransferase-like superfamily JDM601_2365 98032b43f070e23bf625c2588b2b90b2 113 Gene3D G3DSA:3.10.490.10 1 113 4.1E-19 T 12-10-2018 JDM601_2365 98032b43f070e23bf625c2588b2b90b2 113 Pfam PF06094 Gamma-glutamyl cyclotransferase, AIG2-like 6 112 2.3E-10 T 12-10-2018 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like JDM601_1960 cd8da3b7bc2f34a96b94a129f882ea03 491 Gene3D G3DSA:3.40.50.10140 1 103 1.6E-19 T 12-10-2018 IPR035897 Toll/interleukin-1 receptor homology (TIR) domain superfamily JDM601_1960 cd8da3b7bc2f34a96b94a129f882ea03 491 Pfam PF13676 TIR domain 3 92 1.0E-20 T 12-10-2018 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 JDM601_1960 cd8da3b7bc2f34a96b94a129f882ea03 491 Pfam PF14032 PknH-like extracellular domain 292 483 4.2E-40 T 12-10-2018 IPR026954 PknH-like extracellular domain KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1 JDM601_1960 cd8da3b7bc2f34a96b94a129f882ea03 491 Gene3D G3DSA:3.40.1000.70 290 487 2.2E-42 T 12-10-2018 IPR038232 PknH-like extracellular domain superfamily KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1 JDM601_1960 cd8da3b7bc2f34a96b94a129f882ea03 491 SUPERFAMILY SSF52200 3 96 3.01E-19 T 12-10-2018 IPR035897 Toll/interleukin-1 receptor homology (TIR) domain superfamily JDM601_4213 a90d37e03c651cc891e09327d5068447 941 TIGRFAM TIGR00833 actII: transport protein 16 923 1.4E-274 T 12-10-2018 IPR004707 Membrane transport protein MmpL family GO:0016021 JDM601_4213 a90d37e03c651cc891e09327d5068447 941 Pfam PF03176 MMPL family 665 931 2.2E-81 T 12-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 JDM601_4213 a90d37e03c651cc891e09327d5068447 941 Pfam PF03176 MMPL family 49 376 1.0E-95 T 12-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 JDM601_4213 a90d37e03c651cc891e09327d5068447 941 SUPERFAMILY SSF82866 714 923 5.89E-30 T 12-10-2018 JDM601_4213 a90d37e03c651cc891e09327d5068447 941 SUPERFAMILY SSF82866 146 343 1.44E-24 T 12-10-2018 JDM601_4213 a90d37e03c651cc891e09327d5068447 941 Gene3D G3DSA:1.20.1640.10 165 346 1.1E-5 T 12-10-2018 JDM601_3621 4a324f565838fc56adfc119ae62556fa 465 Gene3D G3DSA:3.40.50.2000 22 457 1.2E-164 T 12-10-2018 JDM601_3621 4a324f565838fc56adfc119ae62556fa 465 SUPERFAMILY SSF53756 1 462 3.09E-140 T 12-10-2018 JDM601_3621 4a324f565838fc56adfc119ae62556fa 465 Gene3D G3DSA:3.40.50.2000 238 446 1.2E-164 T 12-10-2018 JDM601_3621 4a324f565838fc56adfc119ae62556fa 465 Pfam PF00982 Glycosyltransferase family 20 1 461 6.8E-154 T 12-10-2018 IPR001830 Glycosyl transferase, family 20 GO:0003824|GO:0005992 KEGG: 00500+2.4.1.15 JDM601_2500 036fbb9488ac135fccb2f284bd42aa29 105 Gene3D G3DSA:3.30.70.100 1 96 5.4E-23 T 12-10-2018 JDM601_2500 036fbb9488ac135fccb2f284bd42aa29 105 SUPERFAMILY SSF54909 1 95 5.05E-24 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel JDM601_2500 036fbb9488ac135fccb2f284bd42aa29 105 Pfam PF03992 Antibiotic biosynthesis monooxygenase 2 70 1.6E-16 T 12-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain JDM601_2477 3824d46b529d5ae69ebd7207c92899c6 252 Pfam PF00005 ABC transporter 29 175 8.9E-38 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JDM601_2477 3824d46b529d5ae69ebd7207c92899c6 252 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JDM601_2477 3824d46b529d5ae69ebd7207c92899c6 252 PIRSF PIRSF039085 8 251 4.7E-110 T 12-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 JDM601_2477 3824d46b529d5ae69ebd7207c92899c6 252 SUPERFAMILY SSF52540 11 245 4.72E-80 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_2477 3824d46b529d5ae69ebd7207c92899c6 252 SMART SM00382 36 223 7.6E-18 T 12-10-2018 IPR003593 AAA+ ATPase domain JDM601_2477 3824d46b529d5ae69ebd7207c92899c6 252 Gene3D G3DSA:3.40.50.300 9 252 5.6E-79 T 12-10-2018 JDM601_1096 f42f42c1bd65dfb3c59bb1b465e066e0 428 Pfam PF02470 MlaD protein 60 133 3.0E-13 T 12-10-2018 IPR003399 Mce/MlaD JDM601_4043 8798e917363d2b4dd0892ee5ae3aba98 114 Pfam PF12680 SnoaL-like domain 11 99 1.2E-7 T 12-10-2018 IPR037401 SnoaL-like domain JDM601_4043 8798e917363d2b4dd0892ee5ae3aba98 114 Gene3D G3DSA:3.10.450.50 2 109 4.8E-11 T 12-10-2018 JDM601_4043 8798e917363d2b4dd0892ee5ae3aba98 114 SUPERFAMILY SSF54427 3 101 8.35E-12 T 12-10-2018 IPR032710 NTF2-like domain superfamily JDM601_1209 6eec46375b99760f3c7a672cc8baff3a 380 Gene3D G3DSA:2.40.50.940 223 366 2.0E-29 T 12-10-2018 JDM601_1209 6eec46375b99760f3c7a672cc8baff3a 380 SUPERFAMILY SSF50331 237 373 8.02E-22 T 12-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal JDM601_1209 6eec46375b99760f3c7a672cc8baff3a 380 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JDM601_1209 6eec46375b99760f3c7a672cc8baff3a 380 Pfam PF00005 ABC transporter 21 162 2.2E-30 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JDM601_1209 6eec46375b99760f3c7a672cc8baff3a 380 Gene3D G3DSA:2.40.50.140 288 357 2.0E-29 T 12-10-2018 JDM601_1209 6eec46375b99760f3c7a672cc8baff3a 380 SUPERFAMILY SSF52540 4 243 2.32E-86 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_1209 6eec46375b99760f3c7a672cc8baff3a 380 Gene3D G3DSA:3.40.50.300 3 222 2.0E-65 T 12-10-2018 JDM601_1209 6eec46375b99760f3c7a672cc8baff3a 380 SMART SM00382 29 220 5.3E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain JDM601_2289 b86c9c12427befee0c33e57f5ac3eea2 343 Gene3D G3DSA:3.40.140.10 10 142 1.8E-34 T 12-10-2018 JDM601_2289 b86c9c12427befee0c33e57f5ac3eea2 343 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 16 110 1.3E-14 T 12-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain JDM601_2289 b86c9c12427befee0c33e57f5ac3eea2 343 Gene3D G3DSA:3.40.430.10 147 343 4.7E-53 T 12-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 JDM601_2289 b86c9c12427befee0c33e57f5ac3eea2 343 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 61 99 - T 12-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 JDM601_2289 b86c9c12427befee0c33e57f5ac3eea2 343 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 17 338 1.4E-93 T 12-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 JDM601_2289 b86c9c12427befee0c33e57f5ac3eea2 343 PIRSF PIRSF006769 256 343 2.2E-11 T 12-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 JDM601_2289 b86c9c12427befee0c33e57f5ac3eea2 343 PIRSF PIRSF006769 9 272 9.6E-91 T 12-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 JDM601_2289 b86c9c12427befee0c33e57f5ac3eea2 343 SUPERFAMILY SSF53927 16 140 2.84E-36 T 12-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 JDM601_2289 b86c9c12427befee0c33e57f5ac3eea2 343 Pfam PF01872 RibD C-terminal domain 158 338 5.4E-50 T 12-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 JDM601_2289 b86c9c12427befee0c33e57f5ac3eea2 343 SUPERFAMILY SSF53597 158 340 2.66E-46 T 12-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 JDM601_1670 0b8ed7f21631b5ebcfd81c9acc5b2a72 295 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 1 279 5.4E-20 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JDM601_1670 0b8ed7f21631b5ebcfd81c9acc5b2a72 295 Gene3D G3DSA:3.50.50.60 107 218 5.3E-81 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_1670 0b8ed7f21631b5ebcfd81c9acc5b2a72 295 SUPERFAMILY SSF51905 1 289 1.1E-27 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_1670 0b8ed7f21631b5ebcfd81c9acc5b2a72 295 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 93 111 3.0E-8 T 12-10-2018 JDM601_1670 0b8ed7f21631b5ebcfd81c9acc5b2a72 295 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 244 266 3.0E-8 T 12-10-2018 JDM601_1670 0b8ed7f21631b5ebcfd81c9acc5b2a72 295 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 135 153 3.0E-8 T 12-10-2018 JDM601_1670 0b8ed7f21631b5ebcfd81c9acc5b2a72 295 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 94 102 9.4E-11 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 JDM601_1670 0b8ed7f21631b5ebcfd81c9acc5b2a72 295 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 116 128 9.4E-11 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 JDM601_1670 0b8ed7f21631b5ebcfd81c9acc5b2a72 295 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 254 272 9.4E-11 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 JDM601_1670 0b8ed7f21631b5ebcfd81c9acc5b2a72 295 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 131 155 9.4E-11 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 JDM601_1670 0b8ed7f21631b5ebcfd81c9acc5b2a72 295 Gene3D G3DSA:3.50.50.60 1 285 5.3E-81 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_3403 9a5f26169d094288b78dfcbbc1101d14 502 Gene3D G3DSA:3.30.300.30 400 501 4.5E-21 T 12-10-2018 JDM601_3403 9a5f26169d094288b78dfcbbc1101d14 502 Gene3D G3DSA:3.40.50.12780 1 399 7.4E-84 T 12-10-2018 JDM601_3403 9a5f26169d094288b78dfcbbc1101d14 502 SUPERFAMILY SSF56801 6 500 2.09E-111 T 12-10-2018 JDM601_3403 9a5f26169d094288b78dfcbbc1101d14 502 Pfam PF13193 AMP-binding enzyme C-terminal domain 414 490 1.4E-8 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain JDM601_3403 9a5f26169d094288b78dfcbbc1101d14 502 ProSitePatterns PS00455 Putative AMP-binding domain signature. 174 185 - T 12-10-2018 IPR020845 AMP-binding, conserved site JDM601_3403 9a5f26169d094288b78dfcbbc1101d14 502 Pfam PF00501 AMP-binding enzyme 11 405 1.0E-71 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 JDM601_0509 51f260793af70489b19ed1ec8e983e46 334 Pfam PF14716 Helix-hairpin-helix domain 4 68 1.4E-15 T 12-10-2018 IPR010996 DNA polymerase beta-like, N-terminal domain JDM601_0509 51f260793af70489b19ed1ec8e983e46 334 SUPERFAMILY SSF89550 97 330 4.84E-47 T 12-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 JDM601_0509 51f260793af70489b19ed1ec8e983e46 334 Gene3D G3DSA:3.20.20.140 91 334 1.5E-63 T 12-10-2018 JDM601_0509 51f260793af70489b19ed1ec8e983e46 334 PIRSF PIRSF036978 1 334 1.7E-185 T 12-10-2018 IPR017078 Uncharacterised conserved protein UCP036978, histidinol phosphatase-related hydrolase, SCO0789 JDM601_0509 51f260793af70489b19ed1ec8e983e46 334 Gene3D G3DSA:1.10.150.110 2 83 1.6E-12 T 12-10-2018 IPR027421 DNA polymerase lambda lyase domain superfamily JDM601_0509 51f260793af70489b19ed1ec8e983e46 334 SMART SM00481 98 177 1.1E-18 T 12-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal JDM601_0509 51f260793af70489b19ed1ec8e983e46 334 SUPERFAMILY SSF47802 3 82 5.23E-16 T 12-10-2018 IPR027421 DNA polymerase lambda lyase domain superfamily JDM601_0509 51f260793af70489b19ed1ec8e983e46 334 Pfam PF02811 PHP domain 99 243 1.3E-8 T 12-10-2018 IPR004013 PHP domain GO:0003824 JDM601_1606 253d099d3d09c1e5a0d7af5f52b1fa65 291 Gene3D G3DSA:3.40.50.1820 11 285 1.1E-66 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_1606 253d099d3d09c1e5a0d7af5f52b1fa65 291 SUPERFAMILY SSF53474 33 277 1.34E-44 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_1606 253d099d3d09c1e5a0d7af5f52b1fa65 291 Pfam PF07859 alpha/beta hydrolase fold 56 255 7.3E-48 T 12-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 JDM601_1722 806e0905f85c4ddd30778e500eac4491 244 Pfam PF01553 Acyltransferase 21 151 6.2E-29 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 JDM601_1722 806e0905f85c4ddd30778e500eac4491 244 SMART SM00563 35 154 2.2E-37 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 JDM601_1722 806e0905f85c4ddd30778e500eac4491 244 SUPERFAMILY SSF69593 2 217 1.83E-57 T 12-10-2018 JDM601_0854 03b4a6f940912a24d509e368cb532089 257 SUPERFAMILY SSF52096 7 256 2.18E-72 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily JDM601_0854 03b4a6f940912a24d509e368cb532089 257 Pfam PF00378 Enoyl-CoA hydratase/isomerase 13 256 4.3E-52 T 12-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 JDM601_0854 03b4a6f940912a24d509e368cb532089 257 Gene3D G3DSA:3.90.226.10 3 257 4.4E-73 T 12-10-2018 JDM601_0972 1f781a95343180274d7a70139da1cd72 211 Gene3D G3DSA:2.170.120.20 100 184 5.3E-14 T 12-10-2018 IPR037121 Ribosomal protein L25, C-terminal JDM601_0972 1f781a95343180274d7a70139da1cd72 211 Hamap MF_01334 50S ribosomal protein L25 [rplY]. 8 184 23.686 T 12-10-2018 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 JDM601_0972 1f781a95343180274d7a70139da1cd72 211 TIGRFAM TIGR00731 bL25_bact_ctc: ribosomal protein bL25, Ctc-form 10 181 1.3E-51 T 12-10-2018 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 JDM601_0972 1f781a95343180274d7a70139da1cd72 211 Pfam PF01386 Ribosomal L25p family 10 96 5.8E-23 T 12-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 JDM601_0972 1f781a95343180274d7a70139da1cd72 211 SUPERFAMILY SSF50715 9 189 5.41E-46 T 12-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 JDM601_0972 1f781a95343180274d7a70139da1cd72 211 Pfam PF14693 Ribosomal protein TL5, C-terminal domain 104 184 3.4E-16 T 12-10-2018 IPR020057 Ribosomal protein L25, beta domain JDM601_0972 1f781a95343180274d7a70139da1cd72 211 Gene3D G3DSA:2.40.240.10 6 99 2.9E-27 T 12-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 JDM601_0972 1f781a95343180274d7a70139da1cd72 211 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 12 95 2.0E-35 T 12-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 JDM601_4212 53fe0dbae2cec9a8c85d650a97f9cc2a 390 Gene3D G3DSA:3.90.380.10 38 257 6.4E-41 T 12-10-2018 JDM601_4212 53fe0dbae2cec9a8c85d650a97f9cc2a 390 Pfam PF00355 Rieske [2Fe-2S] domain 62 142 1.4E-17 T 12-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 JDM601_4212 53fe0dbae2cec9a8c85d650a97f9cc2a 390 SUPERFAMILY SSF55961 177 387 2.04E-28 T 12-10-2018 JDM601_4212 53fe0dbae2cec9a8c85d650a97f9cc2a 390 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 45 70 4.7E-6 T 12-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 JDM601_4212 53fe0dbae2cec9a8c85d650a97f9cc2a 390 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 75 90 4.7E-6 T 12-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 JDM601_4212 53fe0dbae2cec9a8c85d650a97f9cc2a 390 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 116 136 4.7E-6 T 12-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 JDM601_4212 53fe0dbae2cec9a8c85d650a97f9cc2a 390 ProSitePatterns PS00570 Bacterial ring hydroxylating dioxygenases alpha-subunit signature. 103 125 - T 12-10-2018 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site GO:0005506|GO:0051537|GO:0055114 JDM601_4212 53fe0dbae2cec9a8c85d650a97f9cc2a 390 SUPERFAMILY SSF50022 26 170 2.75E-41 T 12-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 JDM601_4212 53fe0dbae2cec9a8c85d650a97f9cc2a 390 Gene3D G3DSA:2.102.10.10 58 183 6.4E-41 T 12-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 JDM601_4212 53fe0dbae2cec9a8c85d650a97f9cc2a 390 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 211 383 1.4E-19 T 12-10-2018 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0044237|GO:0051537|GO:0055114 JDM601_3205 8961cd44c4c6c04fb987489f3c2b1c8f 1094 Pfam PF14579 Helix-hairpin-helix motif 837 925 3.2E-25 T 12-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 JDM601_3205 8961cd44c4c6c04fb987489f3c2b1c8f 1094 Hamap MF_01902 Error-prone DNA polymerase [dnaE2]. 50 1094 12.906 T 12-10-2018 IPR023073 DNA polymerase, error-prone GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 JDM601_3205 8961cd44c4c6c04fb987489f3c2b1c8f 1094 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 346 761 9.0E-142 T 12-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 JDM601_3205 8961cd44c4c6c04fb987489f3c2b1c8f 1094 Pfam PF02811 PHP domain 52 227 4.4E-31 T 12-10-2018 IPR004013 PHP domain GO:0003824 JDM601_3205 8961cd44c4c6c04fb987489f3c2b1c8f 1094 SMART SM00481 51 123 7.6E-22 T 12-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal JDM601_3205 8961cd44c4c6c04fb987489f3c2b1c8f 1094 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 51 927 2.5E-197 T 12-10-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 JDM601_3205 8961cd44c4c6c04fb987489f3c2b1c8f 1094 SUPERFAMILY SSF89550 51 263 4.19E-19 T 12-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 JDM601_3205 8961cd44c4c6c04fb987489f3c2b1c8f 1094 Gene3D G3DSA:3.20.20.140 45 323 4.9E-76 T 12-10-2018 JDM601_3083 c6938dda6c86df4219962fa6012026a2 191 SMART SM01110 1 186 3.2E-74 T 12-10-2018 IPR000675 Cutinase/acetylxylan esterase GO:0016787 JDM601_3083 c6938dda6c86df4219962fa6012026a2 191 SUPERFAMILY SSF53474 1 186 3.73E-35 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_3083 c6938dda6c86df4219962fa6012026a2 191 Pfam PF01083 Cutinase 1 185 2.6E-37 T 12-10-2018 IPR000675 Cutinase/acetylxylan esterase GO:0016787 JDM601_3083 c6938dda6c86df4219962fa6012026a2 191 Gene3D G3DSA:3.40.50.1820 1 190 1.0E-42 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_0112 675bedb9ed14070966b215a7d1f021a0 325 SUPERFAMILY SSF51735 129 282 2.45E-21 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_0112 675bedb9ed14070966b215a7d1f021a0 325 Gene3D G3DSA:3.90.180.10 103 310 5.2E-33 T 12-10-2018 JDM601_0112 675bedb9ed14070966b215a7d1f021a0 325 Pfam PF00107 Zinc-binding dehydrogenase 159 272 2.5E-14 T 12-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 JDM601_0112 675bedb9ed14070966b215a7d1f021a0 325 Gene3D G3DSA:3.90.180.10 6 98 1.1E-11 T 12-10-2018 JDM601_0112 675bedb9ed14070966b215a7d1f021a0 325 SUPERFAMILY SSF50129 10 157 2.52E-17 T 12-10-2018 IPR011032 GroES-like superfamily JDM601_0112 675bedb9ed14070966b215a7d1f021a0 325 Gene3D G3DSA:3.40.50.720 133 268 5.2E-33 T 12-10-2018 JDM601_3449 a5c14d7790f116e9662200064d019a22 485 Gene3D G3DSA:3.40.605.10 19 479 4.9E-151 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 JDM601_3449 a5c14d7790f116e9662200064d019a22 485 Pfam PF00171 Aldehyde dehydrogenase family 19 481 6.4E-140 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 JDM601_3449 a5c14d7790f116e9662200064d019a22 485 SUPERFAMILY SSF53720 7 482 6.15E-137 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 JDM601_3449 a5c14d7790f116e9662200064d019a22 485 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 255 262 - T 12-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 JDM601_3449 a5c14d7790f116e9662200064d019a22 485 Gene3D G3DSA:3.40.309.10 263 455 4.9E-151 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 JDM601_1314 247af82135cb698779875c917e4b61ae 331 SUPERFAMILY SSF53474 43 130 2.55E-5 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_1314 247af82135cb698779875c917e4b61ae 331 Pfam PF08237 PE-PPE domain 43 108 1.2E-7 T 12-10-2018 IPR013228 PE-PPE, C-terminal JDM601_1314 247af82135cb698779875c917e4b61ae 331 Pfam PF08237 PE-PPE domain 112 221 4.9E-22 T 12-10-2018 IPR013228 PE-PPE, C-terminal JDM601_3777 8d866adbc0eab824ac5795a30816437d 415 SUPERFAMILY SSF47203 248 409 1.23E-23 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 JDM601_3777 8d866adbc0eab824ac5795a30816437d 415 Gene3D G3DSA:2.40.110.10 142 252 9.7E-34 T 12-10-2018 JDM601_3777 8d866adbc0eab824ac5795a30816437d 415 Gene3D G3DSA:1.20.140.10 253 411 1.1E-36 T 12-10-2018 JDM601_3777 8d866adbc0eab824ac5795a30816437d 415 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 142 233 3.3E-19 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 JDM601_3777 8d866adbc0eab824ac5795a30816437d 415 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 47 137 5.3E-13 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 JDM601_3777 8d866adbc0eab824ac5795a30816437d 415 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 248 405 3.8E-25 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 JDM601_3777 8d866adbc0eab824ac5795a30816437d 415 SUPERFAMILY SSF56645 17 261 1.26E-64 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 JDM601_3777 8d866adbc0eab824ac5795a30816437d 415 Gene3D G3DSA:1.10.540.10 17 137 1.3E-22 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 JDM601_1840 5bc8b74c9ddc1c20790c51352497e487 592 ProSitePatterns PS00211 ABC transporters family signature. 123 137 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JDM601_1840 5bc8b74c9ddc1c20790c51352497e487 592 Gene3D G3DSA:3.40.50.300 2 236 2.7E-46 T 12-10-2018 JDM601_1840 5bc8b74c9ddc1c20790c51352497e487 592 Gene3D G3DSA:3.40.50.300 268 510 1.2E-54 T 12-10-2018 JDM601_1840 5bc8b74c9ddc1c20790c51352497e487 592 SUPERFAMILY SSF52540 277 487 1.33E-43 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_1840 5bc8b74c9ddc1c20790c51352497e487 592 Pfam PF00005 ABC transporter 20 151 1.3E-21 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JDM601_1840 5bc8b74c9ddc1c20790c51352497e487 592 SMART SM00382 29 207 3.2E-5 T 12-10-2018 IPR003593 AAA+ ATPase domain JDM601_1840 5bc8b74c9ddc1c20790c51352497e487 592 SMART SM00382 311 490 9.3E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain JDM601_1840 5bc8b74c9ddc1c20790c51352497e487 592 Pfam PF00005 ABC transporter 302 438 2.8E-23 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JDM601_1840 5bc8b74c9ddc1c20790c51352497e487 592 SUPERFAMILY SSF52540 4 199 1.33E-36 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_1397 d5aca99f447ac5e168eae7a8bfa89640 424 SUPERFAMILY SSF103473 12 419 3.66E-29 T 12-10-2018 IPR036259 MFS transporter superfamily JDM601_1397 d5aca99f447ac5e168eae7a8bfa89640 424 Gene3D G3DSA:1.20.1250.20 4 205 3.8E-7 T 12-10-2018 JDM601_1397 d5aca99f447ac5e168eae7a8bfa89640 424 Pfam PF11700 Vacuole effluxer Atg22 like 132 421 4.6E-24 T 12-10-2018 IPR024671 Autophagy-related protein 22-like JDM601_1397 d5aca99f447ac5e168eae7a8bfa89640 424 Gene3D G3DSA:1.20.1250.20 234 422 1.1E-12 T 12-10-2018 JDM601_3751 9db7738176c919157d9014ebcd488aba 504 SUPERFAMILY SSF56801 4 498 1.96E-100 T 12-10-2018 JDM601_3751 9db7738176c919157d9014ebcd488aba 504 Pfam PF13193 AMP-binding enzyme C-terminal domain 413 484 2.0E-16 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain JDM601_3751 9db7738176c919157d9014ebcd488aba 504 ProSitePatterns PS00455 Putative AMP-binding domain signature. 159 170 - T 12-10-2018 IPR020845 AMP-binding, conserved site JDM601_3751 9db7738176c919157d9014ebcd488aba 504 Pfam PF00501 AMP-binding enzyme 8 404 2.5E-49 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 JDM601_3751 9db7738176c919157d9014ebcd488aba 504 Gene3D G3DSA:3.30.300.310 401 502 8.0E-29 T 12-10-2018 JDM601_3751 9db7738176c919157d9014ebcd488aba 504 Gene3D G3DSA:3.40.50.12780 1 400 1.9E-59 T 12-10-2018 JDM601_3683 be7c1d62a4b670fe3e06ea61d7dcca0b 560 SUPERFAMILY SSF51905 2 559 1.71E-41 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_3683 be7c1d62a4b670fe3e06ea61d7dcca0b 560 Pfam PF00890 FAD binding domain 7 541 3.1E-91 T 12-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 JDM601_3683 be7c1d62a4b670fe3e06ea61d7dcca0b 560 SUPERFAMILY SSF56425 317 495 9.68E-37 T 12-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 JDM601_3819 e6b8db53c9f48466aa86949aed9e1fab 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 8.0E-15 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3819 e6b8db53c9f48466aa86949aed9e1fab 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 8.0E-15 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3819 e6b8db53c9f48466aa86949aed9e1fab 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 227 8.0E-15 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3819 e6b8db53c9f48466aa86949aed9e1fab 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 8.0E-15 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3819 e6b8db53c9f48466aa86949aed9e1fab 243 Pfam PF00106 short chain dehydrogenase 1 193 1.0E-33 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3819 e6b8db53c9f48466aa86949aed9e1fab 243 SUPERFAMILY SSF51735 1 240 1.15E-47 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_3819 e6b8db53c9f48466aa86949aed9e1fab 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 3.1E-6 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3819 e6b8db53c9f48466aa86949aed9e1fab 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 3.1E-6 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3819 e6b8db53c9f48466aa86949aed9e1fab 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 3.1E-6 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3819 e6b8db53c9f48466aa86949aed9e1fab 243 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 JDM601_3819 e6b8db53c9f48466aa86949aed9e1fab 243 Gene3D G3DSA:3.40.50.720 1 243 2.6E-57 T 12-10-2018 JDM601_0946 f15c6f51069bff284dc864d31ab78ad3 177 Gene3D G3DSA:3.40.630.30 5 167 6.9E-37 T 12-10-2018 JDM601_0946 f15c6f51069bff284dc864d31ab78ad3 177 SUPERFAMILY SSF55729 26 149 4.85E-12 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase JDM601_0946 f15c6f51069bff284dc864d31ab78ad3 177 Pfam PF00583 Acetyltransferase (GNAT) family 35 147 5.0E-6 T 12-10-2018 IPR000182 GNAT domain JDM601_3553 d00f09014ec57b5d8f9d0abb24481f69 382 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 242 369 1.6E-22 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 JDM601_3553 d00f09014ec57b5d8f9d0abb24481f69 382 Gene3D G3DSA:1.10.540.10 2 121 1.4E-17 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 JDM601_3553 d00f09014ec57b5d8f9d0abb24481f69 382 SUPERFAMILY SSF56645 3 220 1.7E-31 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 JDM601_3553 d00f09014ec57b5d8f9d0abb24481f69 382 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 97 2.0E-11 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 JDM601_3553 d00f09014ec57b5d8f9d0abb24481f69 382 Gene3D G3DSA:2.40.110.10 136 231 4.3E-17 T 12-10-2018 JDM601_3553 d00f09014ec57b5d8f9d0abb24481f69 382 SUPERFAMILY SSF47203 238 372 2.54E-32 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 JDM601_3553 d00f09014ec57b5d8f9d0abb24481f69 382 Gene3D G3DSA:1.20.140.10 240 377 1.5E-31 T 12-10-2018 JDM601_1464 dd9edd017dc9cff47caf7982b1a2ac9d 103 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 3 103 19.605 T 12-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JDM601_1464 dd9edd017dc9cff47caf7982b1a2ac9d 103 TIGRFAM TIGR00061 L21: ribosomal protein bL21 4 102 8.2E-25 T 12-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JDM601_1464 dd9edd017dc9cff47caf7982b1a2ac9d 103 Pfam PF00829 Ribosomal prokaryotic L21 protein 4 102 2.8E-33 T 12-10-2018 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JDM601_1464 dd9edd017dc9cff47caf7982b1a2ac9d 103 ProSitePatterns PS01169 Ribosomal protein L21 signature. 73 95 - T 12-10-2018 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 JDM601_1464 dd9edd017dc9cff47caf7982b1a2ac9d 103 SUPERFAMILY SSF141091 4 102 2.09E-31 T 12-10-2018 IPR036164 L21-like superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JDM601_2427 1c98a7d514a0b68fb285c794c0eb6313 637 Pfam PF02780 Transketolase, C-terminal domain 502 612 1.8E-25 T 12-10-2018 IPR033248 Transketolase, C-terminal domain JDM601_2427 1c98a7d514a0b68fb285c794c0eb6313 637 SMART SM00861 314 478 2.4E-54 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain JDM601_2427 1c98a7d514a0b68fb285c794c0eb6313 637 Gene3D G3DSA:3.40.50.920 499 624 4.6E-27 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 JDM601_2427 1c98a7d514a0b68fb285c794c0eb6313 637 SUPERFAMILY SSF52518 18 361 1.97E-63 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold JDM601_2427 1c98a7d514a0b68fb285c794c0eb6313 637 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 1 621 40.974 T 12-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 JDM601_2427 1c98a7d514a0b68fb285c794c0eb6313 637 SUPERFAMILY SSF52518 292 476 6.87E-53 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold JDM601_2427 1c98a7d514a0b68fb285c794c0eb6313 637 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 2 278 3.1E-105 T 12-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 JDM601_2427 1c98a7d514a0b68fb285c794c0eb6313 637 Gene3D G3DSA:3.40.50.970 312 485 2.7E-57 T 12-10-2018 JDM601_2427 1c98a7d514a0b68fb285c794c0eb6313 637 ProSitePatterns PS00801 Transketolase signature 1. 27 46 - T 12-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 JDM601_2427 1c98a7d514a0b68fb285c794c0eb6313 637 SUPERFAMILY SSF52922 501 620 2.88E-24 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 JDM601_2427 1c98a7d514a0b68fb285c794c0eb6313 637 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 5 620 3.4E-183 T 12-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 JDM601_2427 1c98a7d514a0b68fb285c794c0eb6313 637 ProSitePatterns PS00802 Transketolase signature 2. 420 436 - T 12-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 JDM601_2427 1c98a7d514a0b68fb285c794c0eb6313 637 Pfam PF02779 Transketolase, pyrimidine binding domain 316 476 1.7E-36 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain JDM601_0176 6c11a95da6c00c2d2b4c9b8d775f2889 99 Pfam PF01850 PIN domain 5 88 1.4E-5 T 12-10-2018 IPR002716 PIN domain JDM601_0176 6c11a95da6c00c2d2b4c9b8d775f2889 99 SUPERFAMILY SSF88723 6 92 7.01E-10 T 12-10-2018 IPR029060 PIN-like domain superfamily JDM601_2752 5f7a3e1d31683ca20a9913df97536a94 414 SUPERFAMILY SSF53756 2 391 4.89E-92 T 12-10-2018 JDM601_2752 5f7a3e1d31683ca20a9913df97536a94 414 Gene3D G3DSA:3.40.50.2000 5 390 2.7E-100 T 12-10-2018 JDM601_2752 5f7a3e1d31683ca20a9913df97536a94 414 Pfam PF00534 Glycosyl transferases group 1 212 364 3.2E-40 T 12-10-2018 IPR001296 Glycosyl transferase, family 1 JDM601_2752 5f7a3e1d31683ca20a9913df97536a94 414 Pfam PF13439 Glycosyltransferase Family 4 15 204 2.1E-29 T 12-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 JDM601_2752 5f7a3e1d31683ca20a9913df97536a94 414 Gene3D G3DSA:3.40.50.2000 200 373 2.7E-100 T 12-10-2018 JDM601_1486 54998d49554a37bfc41d5e997a3741dd 330 Gene3D G3DSA:3.40.50.150 82 260 8.3E-24 T 12-10-2018 JDM601_1486 54998d49554a37bfc41d5e997a3741dd 330 SUPERFAMILY SSF53335 118 283 5.17E-27 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JDM601_1486 54998d49554a37bfc41d5e997a3741dd 330 Pfam PF13649 Methyltransferase domain 132 228 2.0E-12 T 12-10-2018 JDM601_2996 eae3649f149f6cc5dff3a4f04898e9e3 248 SUPERFAMILY SSF53335 7 193 3.32E-34 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JDM601_2996 eae3649f149f6cc5dff3a4f04898e9e3 248 Pfam PF08241 Methyltransferase domain 19 121 6.6E-17 T 12-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 JDM601_2996 eae3649f149f6cc5dff3a4f04898e9e3 248 Gene3D G3DSA:3.40.50.150 6 185 1.2E-30 T 12-10-2018 JDM601_2820 b9677450eaadebd11c8049261e6cd2d5 87 SUPERFAMILY SSF140453 6 81 9.55E-7 T 12-10-2018 IPR036689 ESAT-6-like superfamily JDM601_2820 b9677450eaadebd11c8049261e6cd2d5 87 Gene3D G3DSA:1.10.287.1060 5 87 1.4E-11 T 12-10-2018 JDM601_2820 b9677450eaadebd11c8049261e6cd2d5 87 Pfam PF06013 Proteins of 100 residues with WXG 6 80 7.6E-7 T 12-10-2018 IPR010310 Type VII secretion system ESAT-6-like JDM601_0021 fce3909268c3fa83f3bb5d18cc7d3ece 520 Gene3D G3DSA:3.30.2320.60 1 132 3.1E-49 T 12-10-2018 JDM601_0021 fce3909268c3fa83f3bb5d18cc7d3ece 520 Gene3D G3DSA:2.60.200.20 424 520 2.6E-29 T 12-10-2018 JDM601_0021 fce3909268c3fa83f3bb5d18cc7d3ece 520 SMART SM00240 447 497 7.9E-12 T 12-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 JDM601_0021 fce3909268c3fa83f3bb5d18cc7d3ece 520 Pfam PF12401 Protein of unknown function (DUF2662) 8 122 1.2E-35 T 12-10-2018 IPR022128 Domain of unknown function DUF3662 JDM601_0021 fce3909268c3fa83f3bb5d18cc7d3ece 520 Pfam PF00498 FHA domain 449 511 4.0E-15 T 12-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 JDM601_0021 fce3909268c3fa83f3bb5d18cc7d3ece 520 SUPERFAMILY SSF49879 403 519 2.3E-28 T 12-10-2018 IPR008984 SMAD/FHA domain superfamily GO:0005515 JDM601_0347 aa5d324778dbdeaa4826d68a4be87048 406 SUPERFAMILY SSF50630 111 402 1.14E-7 T 12-10-2018 IPR021109 Aspartic peptidase domain superfamily JDM601_0347 aa5d324778dbdeaa4826d68a4be87048 406 Gene3D G3DSA:2.40.70.10 93 397 1.0E-81 T 12-10-2018 IPR021109 Aspartic peptidase domain superfamily JDM601_1302 a420b9c1cd1fc4b7344808ca71994324 151 Pfam PF03899 ATP synthase I chain 21 114 8.7E-6 T 12-10-2018 IPR005598 ATP synthase protein I JDM601_3413 9ecf04669ee697fbf75a727ec09a6ca1 392 SUPERFAMILY SSF48264 9 388 2.1E-69 T 12-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_3413 9ecf04669ee697fbf75a727ec09a6ca1 392 Pfam PF00067 Cytochrome P450 203 356 1.2E-16 T 12-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_3413 9ecf04669ee697fbf75a727ec09a6ca1 392 PRINTS PR00359 B-class P450 signature 128 144 7.2E-34 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3413 9ecf04669ee697fbf75a727ec09a6ca1 392 PRINTS PR00359 B-class P450 signature 185 207 7.2E-34 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3413 9ecf04669ee697fbf75a727ec09a6ca1 392 PRINTS PR00359 B-class P450 signature 329 338 7.2E-34 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3413 9ecf04669ee697fbf75a727ec09a6ca1 392 PRINTS PR00359 B-class P450 signature 263 274 7.2E-34 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3413 9ecf04669ee697fbf75a727ec09a6ca1 392 PRINTS PR00359 B-class P450 signature 280 307 7.2E-34 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3413 9ecf04669ee697fbf75a727ec09a6ca1 392 PRINTS PR00359 B-class P450 signature 82 93 7.2E-34 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3413 9ecf04669ee697fbf75a727ec09a6ca1 392 PRINTS PR00359 B-class P450 signature 145 160 7.2E-34 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3413 9ecf04669ee697fbf75a727ec09a6ca1 392 PRINTS PR00359 B-class P450 signature 338 349 7.2E-34 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3413 9ecf04669ee697fbf75a727ec09a6ca1 392 PRINTS PR00385 P450 superfamily signature 263 274 1.6E-7 T 12-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_3413 9ecf04669ee697fbf75a727ec09a6ca1 392 PRINTS PR00385 P450 superfamily signature 228 245 1.6E-7 T 12-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_3413 9ecf04669ee697fbf75a727ec09a6ca1 392 PRINTS PR00385 P450 superfamily signature 338 349 1.6E-7 T 12-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_3413 9ecf04669ee697fbf75a727ec09a6ca1 392 PRINTS PR00385 P450 superfamily signature 329 338 1.6E-7 T 12-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_3413 9ecf04669ee697fbf75a727ec09a6ca1 392 Gene3D G3DSA:1.10.630.10 4 392 3.3E-91 T 12-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_3413 9ecf04669ee697fbf75a727ec09a6ca1 392 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 331 340 - T 12-10-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 JDM601_0473 4ecc43b79ec964eb012a31e1775ccdc5 434 SUPERFAMILY SSF141523 238 359 9.94E-22 T 12-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like JDM601_0473 4ecc43b79ec964eb012a31e1775ccdc5 434 Gene3D G3DSA:2.60.40.3780 36 132 3.8E-20 T 12-10-2018 JDM601_0473 4ecc43b79ec964eb012a31e1775ccdc5 434 Gene3D G3DSA:2.40.440.10 240 376 1.7E-88 T 12-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like JDM601_0473 4ecc43b79ec964eb012a31e1775ccdc5 434 Gene3D G3DSA:2.60.40.3710 141 387 1.7E-88 T 12-10-2018 JDM601_0473 4ecc43b79ec964eb012a31e1775ccdc5 434 Pfam PF03734 L,D-transpeptidase catalytic domain 240 359 4.7E-12 T 12-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 JDM601_2812 696512782e8c4f72b5fd644bfbdabf7d 480 Gene3D G3DSA:1.10.10.2840 342 476 3.5E-18 T 12-10-2018 JDM601_2812 696512782e8c4f72b5fd644bfbdabf7d 480 Pfam PF13556 PucR C-terminal helix-turn-helix domain 413 470 1.4E-17 T 12-10-2018 IPR025736 PucR C-terminal helix-turn-helix domain JDM601_1521 3b646dbe13998823237c0ab8efe3229a 135 SUPERFAMILY SSF53955 25 100 5.33E-26 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily JDM601_1521 3b646dbe13998823237c0ab8efe3229a 135 Gene3D G3DSA:1.10.530.10 27 111 9.2E-30 T 12-10-2018 JDM601_1521 3b646dbe13998823237c0ab8efe3229a 135 Pfam PF06737 Transglycosylase-like domain 27 97 9.9E-28 T 12-10-2018 IPR010618 Transglycosylase-like JDM601_2606 2f1ebe6862a8bbbf5e97afc692b6b9c1 487 Pfam PF00361 Proton-conducting membrane transporter 124 417 1.2E-42 T 12-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 JDM601_2606 2f1ebe6862a8bbbf5e97afc692b6b9c1 487 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 238 262 4.1E-6 T 12-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 JDM601_2606 2f1ebe6862a8bbbf5e97afc692b6b9c1 487 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 379 405 4.1E-6 T 12-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 JDM601_2606 2f1ebe6862a8bbbf5e97afc692b6b9c1 487 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 327 346 4.1E-6 T 12-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 JDM601_0677 2ff841022d93a6e19d84a6754f5d81bd 200 Gene3D G3DSA:3.30.70.1730 1 150 4.4E-38 T 12-10-2018 JDM601_0677 2ff841022d93a6e19d84a6754f5d81bd 200 SUPERFAMILY SSF160369 1 169 1.31E-49 T 12-10-2018 JDM601_0677 2ff841022d93a6e19d84a6754f5d81bd 200 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 1 158 24.893 T 12-10-2018 IPR022973 Ribosomal protein L10 JDM601_0677 2ff841022d93a6e19d84a6754f5d81bd 200 ProSitePatterns PS01109 Ribosomal protein L10 signature. 6 40 - T 12-10-2018 IPR002363 Ribosomal protein L10, eubacterial, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 JDM601_0677 2ff841022d93a6e19d84a6754f5d81bd 200 Pfam PF00466 Ribosomal protein L10 1 98 1.1E-26 T 12-10-2018 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 JDM601_3310 945ffee42a14b719ed3539a3914ca286 280 Pfam PF01343 Peptidase family S49 107 257 2.1E-43 T 12-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 JDM601_3310 945ffee42a14b719ed3539a3914ca286 280 Gene3D G3DSA:3.40.1750.10 155 186 1.3E-40 T 12-10-2018 JDM601_3310 945ffee42a14b719ed3539a3914ca286 280 SUPERFAMILY SSF52096 62 246 1.14E-23 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily JDM601_3310 945ffee42a14b719ed3539a3914ca286 280 Gene3D G3DSA:3.90.226.10 64 258 1.3E-40 T 12-10-2018 JDM601_3794 860c4b6408751df5d158f26c66390d0e 335 Pfam PF02470 MlaD protein 36 114 1.0E-14 T 12-10-2018 IPR003399 Mce/MlaD JDM601_2528 53916f330c824a11d4a5ed99d94c41d8 361 Pfam PF00175 Oxidoreductase NAD-binding domain 161 251 1.7E-6 T 12-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 JDM601_2528 53916f330c824a11d4a5ed99d94c41d8 361 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 296 352 1.4E-9 T 12-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 JDM601_2528 53916f330c824a11d4a5ed99d94c41d8 361 SUPERFAMILY SSF54292 264 359 1.84E-20 T 12-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 JDM601_2528 53916f330c824a11d4a5ed99d94c41d8 361 SUPERFAMILY SSF63380 51 148 4.54E-28 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel JDM601_2528 53916f330c824a11d4a5ed99d94c41d8 361 Gene3D G3DSA:3.10.20.30 275 361 7.5E-18 T 12-10-2018 IPR012675 Beta-grasp domain superfamily JDM601_2528 53916f330c824a11d4a5ed99d94c41d8 361 Pfam PF00970 Oxidoreductase FAD-binding domain 56 150 7.8E-6 T 12-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 JDM601_2528 53916f330c824a11d4a5ed99d94c41d8 361 PRINTS PR00409 Phthalate dioxygenase reductase family signature 78 88 5.7E-28 T 12-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 JDM601_2528 53916f330c824a11d4a5ed99d94c41d8 361 PRINTS PR00409 Phthalate dioxygenase reductase family signature 124 138 5.7E-28 T 12-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 JDM601_2528 53916f330c824a11d4a5ed99d94c41d8 361 PRINTS PR00409 Phthalate dioxygenase reductase family signature 160 179 5.7E-28 T 12-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 JDM601_2528 53916f330c824a11d4a5ed99d94c41d8 361 PRINTS PR00409 Phthalate dioxygenase reductase family signature 88 100 5.7E-28 T 12-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 JDM601_2528 53916f330c824a11d4a5ed99d94c41d8 361 PRINTS PR00409 Phthalate dioxygenase reductase family signature 100 114 5.7E-28 T 12-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 JDM601_2528 53916f330c824a11d4a5ed99d94c41d8 361 PRINTS PR00409 Phthalate dioxygenase reductase family signature 237 245 5.7E-28 T 12-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 JDM601_2528 53916f330c824a11d4a5ed99d94c41d8 361 PRINTS PR00409 Phthalate dioxygenase reductase family signature 138 152 5.7E-28 T 12-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 JDM601_2528 53916f330c824a11d4a5ed99d94c41d8 361 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 315 323 - T 12-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 JDM601_2528 53916f330c824a11d4a5ed99d94c41d8 361 SUPERFAMILY SSF52343 146 275 2.49E-24 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain JDM601_2528 53916f330c824a11d4a5ed99d94c41d8 361 Gene3D G3DSA:2.40.30.10 48 149 5.5E-28 T 12-10-2018 JDM601_2528 53916f330c824a11d4a5ed99d94c41d8 361 Gene3D G3DSA:3.40.50.80 150 270 2.0E-21 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain JDM601_1327 cc64dcfe6ae724dc31486e0d34d2f610 297 Pfam PF14561 Tetratricopeptide repeat 221 297 2.0E-18 T 12-10-2018 JDM601_1327 cc64dcfe6ae724dc31486e0d34d2f610 297 Gene3D G3DSA:3.40.30.10 38 147 2.2E-17 T 12-10-2018 JDM601_1327 cc64dcfe6ae724dc31486e0d34d2f610 297 SUPERFAMILY SSF52833 35 144 7.16E-21 T 12-10-2018 IPR036249 Thioredoxin-like superfamily JDM601_1327 cc64dcfe6ae724dc31486e0d34d2f610 297 Pfam PF00085 Thioredoxin 40 140 2.3E-10 T 12-10-2018 IPR013766 Thioredoxin domain GO:0045454 JDM601_1327 cc64dcfe6ae724dc31486e0d34d2f610 297 Gene3D G3DSA:1.25.40.10 217 297 4.0E-11 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JDM601_2961 1bf1fbf1876a1bb223c5b36284e15741 416 Pfam PF12484 Polymorphic PE/PPE proteins C terminal 317 412 1.4E-11 T 12-10-2018 IPR022171 PPE family, C-terminal JDM601_2961 1bf1fbf1876a1bb223c5b36284e15741 416 Pfam PF00823 PPE family 6 162 1.1E-61 T 12-10-2018 IPR000030 PPE family JDM601_2961 1bf1fbf1876a1bb223c5b36284e15741 416 SUPERFAMILY SSF140459 3 175 1.46E-63 T 12-10-2018 JDM601_2961 1bf1fbf1876a1bb223c5b36284e15741 416 Gene3D G3DSA:1.20.1260.20 2 175 8.2E-67 T 12-10-2018 IPR038332 PPE superfamily JDM601_1794 0279d5b6ae8f17da8a986e24a6dd323e 64 TIGRFAM TIGR03687 pupylate_cterm: ubiquitin-like protein Pup 33 64 9.7E-21 T 12-10-2018 IPR008515 Ubiquitin-like, Pup JDM601_1794 0279d5b6ae8f17da8a986e24a6dd323e 64 Pfam PF05639 Pup-like protein 3 64 3.0E-22 T 12-10-2018 IPR008515 Ubiquitin-like, Pup JDM601_1794 0279d5b6ae8f17da8a986e24a6dd323e 64 Hamap MF_02106 Prokaryotic ubiquitin-like protein Pup [pup]. 1 64 16.668 T 12-10-2018 IPR008515 Ubiquitin-like, Pup JDM601_2409 cf51a4d09fa3103662c7ea952712b897 263 Gene3D G3DSA:3.90.226.10 1 206 9.9E-70 T 12-10-2018 JDM601_2409 cf51a4d09fa3103662c7ea952712b897 263 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 107 127 - T 12-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 JDM601_2409 cf51a4d09fa3103662c7ea952712b897 263 SUPERFAMILY SSF52096 15 262 5.26E-65 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily JDM601_2409 cf51a4d09fa3103662c7ea952712b897 263 Pfam PF00378 Enoyl-CoA hydratase/isomerase 17 262 3.7E-40 T 12-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 JDM601_2409 cf51a4d09fa3103662c7ea952712b897 263 Gene3D G3DSA:1.10.12.10 207 263 1.2E-27 T 12-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal JDM601_3521 e3a3e343d4a5d8ba41f7eb031fdd957e 278 SUPERFAMILY SSF51197 11 277 4.03E-61 T 12-10-2018 JDM601_3521 e3a3e343d4a5d8ba41f7eb031fdd957e 278 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 12 269 3.4E-49 T 12-10-2018 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: R-HSA-71262 JDM601_3521 e3a3e343d4a5d8ba41f7eb031fdd957e 278 Gene3D G3DSA:3.60.130.10 8 278 1.7E-61 T 12-10-2018 JDM601_3688 701a1e0b4e4b2c2f4c0be68cc7d8d55e 133 SUPERFAMILY SSF54637 6 128 2.9E-16 T 12-10-2018 IPR029069 HotDog domain superfamily JDM601_3688 701a1e0b4e4b2c2f4c0be68cc7d8d55e 133 Gene3D G3DSA:3.10.129.10 5 130 7.7E-30 T 12-10-2018 JDM601_2829 4daf6958c7501eb6d8459b77903a52c0 530 Gene3D G3DSA:3.40.50.410 1 194 6.8E-35 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily JDM601_2829 4daf6958c7501eb6d8459b77903a52c0 530 SUPERFAMILY SSF53300 2 188 1.35E-27 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily JDM601_2829 4daf6958c7501eb6d8459b77903a52c0 530 SMART SM00327 2 187 1.8E-22 T 12-10-2018 IPR002035 von Willebrand factor, type A JDM601_2829 4daf6958c7501eb6d8459b77903a52c0 530 Pfam PF13519 von Willebrand factor type A domain 5 124 1.7E-12 T 12-10-2018 IPR002035 von Willebrand factor, type A JDM601_1268 9b67fb8195b989547e450f631909e565 281 Pfam PF09664 Protein of unknown function C-terminus (DUF2399) 113 257 1.4E-32 T 12-10-2018 IPR024465 Domain of unknown function DUF2399 JDM601_1268 9b67fb8195b989547e450f631909e565 281 Pfam PF11796 Protein of unknown function N-terminus (DUF3323) 3 93 7.6E-18 T 12-10-2018 IPR024466 Conserved hypothetical protein CHP02679, N terminus JDM601_2096 9a26345346c65a2a9e8ad223a0500547 432 ProSitePatterns PS01173 Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 33 48 - T 12-10-2018 IPR002168 Lipase, GDXG, putative histidine active site GO:0016787 Reactome: R-HSA-163560 JDM601_2096 9a26345346c65a2a9e8ad223a0500547 432 SUPERFAMILY SSF53474 6 411 9.88E-95 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_2096 9a26345346c65a2a9e8ad223a0500547 432 ProSitePatterns PS00122 Carboxylesterases type-B serine active site. 111 126 - T 12-10-2018 IPR019826 Carboxylesterase type B, active site JDM601_2096 9a26345346c65a2a9e8ad223a0500547 432 Gene3D G3DSA:3.40.50.1820 2 429 1.2E-110 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_2096 9a26345346c65a2a9e8ad223a0500547 432 Pfam PF00135 Carboxylesterase family 10 415 2.2E-77 T 12-10-2018 IPR002018 Carboxylesterase, type B JDM601_2096 9a26345346c65a2a9e8ad223a0500547 432 ProSitePatterns PS00941 Carboxylesterases type-B signature 2. 12 22 - T 12-10-2018 IPR019819 Carboxylesterase type B, conserved site JDM601_3128 4c617b24b03106e8ae2e1921cbcce083 243 Pfam PF04480 Protein of unknown function (DUF559) 172 238 5.5E-5 T 12-10-2018 IPR007569 Protein of unknown function DUF559 JDM601_3128 4c617b24b03106e8ae2e1921cbcce083 243 SUPERFAMILY SSF52980 164 239 2.09E-10 T 12-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 JDM601_3128 4c617b24b03106e8ae2e1921cbcce083 243 Gene3D G3DSA:3.40.960.10 145 241 1.7E-14 T 12-10-2018 JDM601_1989 4c393b7a7adfa101ee7b847f67fe2b35 487 Pfam PF06762 Lipase maturation factor 294 476 1.2E-66 T 12-10-2018 IPR009613 Lipase maturation factor Reactome: R-HSA-8963889 JDM601_1989 4c393b7a7adfa101ee7b847f67fe2b35 487 Pfam PF06762 Lipase maturation factor 125 276 3.9E-60 T 12-10-2018 IPR009613 Lipase maturation factor Reactome: R-HSA-8963889 JDM601_2373 328d8507f2b8da238657c97c955f83e8 436 SUPERFAMILY SSF82866 132 359 1.44E-30 T 12-10-2018 JDM601_2373 328d8507f2b8da238657c97c955f83e8 436 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 179 346 6.9E-50 T 12-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial JDM601_2373 328d8507f2b8da238657c97c955f83e8 436 Pfam PF07549 SecD/SecF GG Motif 85 102 9.3E-5 T 12-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site JDM601_2373 328d8507f2b8da238657c97c955f83e8 436 Gene3D G3DSA:1.20.1640.10 174 371 2.2E-6 T 12-10-2018 JDM601_2373 328d8507f2b8da238657c97c955f83e8 436 PRINTS PR01755 Bacterial translocase SecF protein signature 209 223 4.8E-24 T 12-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial JDM601_2373 328d8507f2b8da238657c97c955f83e8 436 PRINTS PR01755 Bacterial translocase SecF protein signature 292 307 4.8E-24 T 12-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial JDM601_2373 328d8507f2b8da238657c97c955f83e8 436 PRINTS PR01755 Bacterial translocase SecF protein signature 257 275 4.8E-24 T 12-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial JDM601_2373 328d8507f2b8da238657c97c955f83e8 436 PRINTS PR01755 Bacterial translocase SecF protein signature 89 104 4.8E-24 T 12-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial JDM601_2373 328d8507f2b8da238657c97c955f83e8 436 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 62 360 23.852 T 12-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 JDM601_2373 328d8507f2b8da238657c97c955f83e8 436 Pfam PF02355 Protein export membrane protein 174 358 8.2E-63 T 12-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial JDM601_2373 328d8507f2b8da238657c97c955f83e8 436 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 90 349 3.6E-76 T 12-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 JDM601_4211 d190d74c8d3d50774dead55be459620a 468 Pfam PF02720 Domain of unknown function (DUF222) 49 375 3.4E-71 T 12-10-2018 IPR003870 Domain of unknown function DUF222 JDM601_3667 420920daae91f4d17708eae35f2395f2 177 Gene3D G3DSA:2.160.10.10 1 174 3.2E-49 T 12-10-2018 JDM601_3667 420920daae91f4d17708eae35f2395f2 177 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 88 121 1.1E-6 T 12-10-2018 IPR001451 Hexapeptide repeat JDM601_3667 420920daae91f4d17708eae35f2395f2 177 SUPERFAMILY SSF51161 3 161 1.94E-38 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily JDM601_0845 bd2f76b30ceff1794778439ac9dae643 188 Pfam PF07366 SnoaL-like polyketide cyclase 22 143 7.4E-12 T 12-10-2018 IPR009959 Polyketide cyclase SnoaL-like GO:0030638 MetaCyc: PWY-7352|MetaCyc: PWY-7354 JDM601_0845 bd2f76b30ceff1794778439ac9dae643 188 SUPERFAMILY SSF54427 16 143 5.68E-23 T 12-10-2018 IPR032710 NTF2-like domain superfamily JDM601_0845 bd2f76b30ceff1794778439ac9dae643 188 Gene3D G3DSA:3.10.450.50 10 144 4.0E-21 T 12-10-2018 JDM601_2077 a9313d0dad7de59d72242c5656608ef1 358 SUPERFAMILY SSF51735 3 154 1.44E-12 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_2077 a9313d0dad7de59d72242c5656608ef1 358 Gene3D G3DSA:3.40.50.720 1 129 3.9E-16 T 12-10-2018 JDM601_1114 9e5ce1f2ed6ffcfb6c7fe195d12ac203 403 Gene3D G3DSA:1.10.630.10 2 403 2.7E-119 T 12-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_1114 9e5ce1f2ed6ffcfb6c7fe195d12ac203 403 Pfam PF00067 Cytochrome P450 186 371 5.1E-20 T 12-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_1114 9e5ce1f2ed6ffcfb6c7fe195d12ac203 403 SUPERFAMILY SSF48264 14 400 5.37E-93 T 12-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_1114 9e5ce1f2ed6ffcfb6c7fe195d12ac203 403 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 343 352 - T 12-10-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 JDM601_1114 9e5ce1f2ed6ffcfb6c7fe195d12ac203 403 PRINTS PR00359 B-class P450 signature 341 350 1.3E-47 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_1114 9e5ce1f2ed6ffcfb6c7fe195d12ac203 403 PRINTS PR00359 B-class P450 signature 157 172 1.3E-47 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_1114 9e5ce1f2ed6ffcfb6c7fe195d12ac203 403 PRINTS PR00359 B-class P450 signature 194 216 1.3E-47 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_1114 9e5ce1f2ed6ffcfb6c7fe195d12ac203 403 PRINTS PR00359 B-class P450 signature 350 361 1.3E-47 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_1114 9e5ce1f2ed6ffcfb6c7fe195d12ac203 403 PRINTS PR00359 B-class P450 signature 320 335 1.3E-47 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_1114 9e5ce1f2ed6ffcfb6c7fe195d12ac203 403 PRINTS PR00359 B-class P450 signature 292 319 1.3E-47 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_1114 9e5ce1f2ed6ffcfb6c7fe195d12ac203 403 PRINTS PR00359 B-class P450 signature 140 156 1.3E-47 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_1114 9e5ce1f2ed6ffcfb6c7fe195d12ac203 403 PRINTS PR00359 B-class P450 signature 275 286 1.3E-47 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_1114 9e5ce1f2ed6ffcfb6c7fe195d12ac203 403 PRINTS PR00359 B-class P450 signature 93 104 1.3E-47 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_0554 40e4e93c9cd2f3d140c9d94c5bc67199 220 Pfam PF13649 Methyltransferase domain 46 140 1.6E-15 T 12-10-2018 JDM601_0554 40e4e93c9cd2f3d140c9d94c5bc67199 220 SUPERFAMILY SSF53335 21 185 4.78E-37 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JDM601_0554 40e4e93c9cd2f3d140c9d94c5bc67199 220 Gene3D G3DSA:3.40.50.150 3 192 2.2E-41 T 12-10-2018 JDM601_2503 0b3ff29d605343c8b49eca739c9fccec 300 PRINTS PR00146 Dihydrodipicolinate synthase signature 113 129 5.4E-30 T 12-10-2018 IPR002220 DapA-like GO:0016829 JDM601_2503 0b3ff29d605343c8b49eca739c9fccec 300 PRINTS PR00146 Dihydrodipicolinate synthase signature 45 66 5.4E-30 T 12-10-2018 IPR002220 DapA-like GO:0016829 JDM601_2503 0b3ff29d605343c8b49eca739c9fccec 300 PRINTS PR00146 Dihydrodipicolinate synthase signature 138 155 5.4E-30 T 12-10-2018 IPR002220 DapA-like GO:0016829 JDM601_2503 0b3ff29d605343c8b49eca739c9fccec 300 PRINTS PR00146 Dihydrodipicolinate synthase signature 81 99 5.4E-30 T 12-10-2018 IPR002220 DapA-like GO:0016829 JDM601_2503 0b3ff29d605343c8b49eca739c9fccec 300 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 48 65 - T 12-10-2018 IPR020624 Schiff base-forming aldolase, conserved site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 JDM601_2503 0b3ff29d605343c8b49eca739c9fccec 300 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 11 295 55.791 T 12-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 JDM601_2503 0b3ff29d605343c8b49eca739c9fccec 300 Gene3D G3DSA:3.20.20.70 1 300 8.5E-114 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JDM601_2503 0b3ff29d605343c8b49eca739c9fccec 300 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 143 173 - T 12-10-2018 IPR020625 Schiff base-forming aldolase, active site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 JDM601_2503 0b3ff29d605343c8b49eca739c9fccec 300 SMART SM01130 11 297 2.5E-113 T 12-10-2018 IPR002220 DapA-like GO:0016829 JDM601_2503 0b3ff29d605343c8b49eca739c9fccec 300 SUPERFAMILY SSF51569 12 296 9.63E-92 T 12-10-2018 JDM601_2503 0b3ff29d605343c8b49eca739c9fccec 300 PIRSF PIRSF001365 8 299 1.3E-83 T 12-10-2018 IPR002220 DapA-like GO:0016829 JDM601_2503 0b3ff29d605343c8b49eca739c9fccec 300 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 15 287 2.0E-79 T 12-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 JDM601_2503 0b3ff29d605343c8b49eca739c9fccec 300 Pfam PF00701 Dihydrodipicolinate synthetase family 13 292 5.4E-78 T 12-10-2018 IPR002220 DapA-like GO:0016829 JDM601_2884 acbf16891bee0f35defadbbd7e671328 244 Gene3D G3DSA:3.40.50.1820 15 244 2.0E-50 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_2884 acbf16891bee0f35defadbbd7e671328 244 SUPERFAMILY SSF53474 33 244 1.22E-38 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_2884 acbf16891bee0f35defadbbd7e671328 244 SMART SM01110 40 244 9.3E-97 T 12-10-2018 IPR000675 Cutinase/acetylxylan esterase GO:0016787 JDM601_2884 acbf16891bee0f35defadbbd7e671328 244 Pfam PF01083 Cutinase 41 244 3.3E-42 T 12-10-2018 IPR000675 Cutinase/acetylxylan esterase GO:0016787 JDM601_3176 14dacc28975cb8e9971b2eb6d16c9007 244 TIGRFAM TIGR00715 precor6x_red: precorrin-6x reductase 3 241 1.7E-48 T 12-10-2018 IPR003723 Precorrin-6x reductase GO:0009236|GO:0016994|GO:0055114 JDM601_3176 14dacc28975cb8e9971b2eb6d16c9007 244 Pfam PF02571 Precorrin-6x reductase CbiJ/CobK 3 240 4.4E-67 T 12-10-2018 IPR003723 Precorrin-6x reductase GO:0009236|GO:0016994|GO:0055114 JDM601_0178 de439faddfde8478391f5865c71d39e4 509 Gene3D G3DSA:3.30.300.310 406 509 2.2E-27 T 12-10-2018 JDM601_0178 de439faddfde8478391f5865c71d39e4 509 SUPERFAMILY SSF56801 13 507 3.01E-124 T 12-10-2018 JDM601_0178 de439faddfde8478391f5865c71d39e4 509 ProSitePatterns PS00455 Putative AMP-binding domain signature. 161 172 - T 12-10-2018 IPR020845 AMP-binding, conserved site JDM601_0178 de439faddfde8478391f5865c71d39e4 509 Gene3D G3DSA:3.40.50.12780 5 402 6.0E-97 T 12-10-2018 JDM601_0178 de439faddfde8478391f5865c71d39e4 509 Pfam PF00501 AMP-binding enzyme 13 410 6.6E-74 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 JDM601_0178 de439faddfde8478391f5865c71d39e4 509 Pfam PF13193 AMP-binding enzyme C-terminal domain 419 497 6.0E-16 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain JDM601_3086 4189f66b7631e2d53f13490e18c241ac 187 Pfam PF01814 Hemerythrin HHE cation binding domain 12 123 1.3E-7 T 12-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 JDM601_3179 9ea9067e0f06d03dabbbe015aca489cc 247 TIGRFAM TIGR02434 CobF: precorrin-6A synthase (deacetylating) 5 246 1.7E-68 T 12-10-2018 IPR012797 Cobalamin (vitamin B12) biosynthesis CobF, precorrin-6A synthase GO:0009236|GO:0043819 KEGG: 00860+2.1.1.152|MetaCyc: PWY-7376 JDM601_3179 9ea9067e0f06d03dabbbe015aca489cc 247 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 5 220 2.4E-28 T 12-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 JDM601_3179 9ea9067e0f06d03dabbbe015aca489cc 247 PIRSF PIRSF036525 2 247 8.7E-67 T 12-10-2018 IPR012797 Cobalamin (vitamin B12) biosynthesis CobF, precorrin-6A synthase GO:0009236|GO:0043819 KEGG: 00860+2.1.1.152|MetaCyc: PWY-7376 JDM601_3179 9ea9067e0f06d03dabbbe015aca489cc 247 Gene3D G3DSA:3.30.950.10 141 247 3.3E-37 T 12-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 JDM601_3179 9ea9067e0f06d03dabbbe015aca489cc 247 Gene3D G3DSA:3.40.1010.10 3 140 6.4E-35 T 12-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 JDM601_3179 9ea9067e0f06d03dabbbe015aca489cc 247 SUPERFAMILY SSF53790 5 244 1.6E-26 T 12-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 JDM601_1073 e7a557a5b6697cc3dee20d08c94445b8 281 Pfam PF00561 alpha/beta hydrolase fold 31 264 3.4E-24 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 JDM601_1073 e7a557a5b6697cc3dee20d08c94445b8 281 SUPERFAMILY SSF53474 5 280 1.63E-53 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_1073 e7a557a5b6697cc3dee20d08c94445b8 281 PRINTS PR00412 Epoxide hydrolase signature 37 55 3.2E-7 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 JDM601_1073 e7a557a5b6697cc3dee20d08c94445b8 281 PRINTS PR00412 Epoxide hydrolase signature 57 72 3.2E-7 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 JDM601_1073 e7a557a5b6697cc3dee20d08c94445b8 281 PRINTS PR00412 Epoxide hydrolase signature 223 239 3.2E-7 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 JDM601_1073 e7a557a5b6697cc3dee20d08c94445b8 281 PRINTS PR00412 Epoxide hydrolase signature 256 278 3.2E-7 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 JDM601_1073 e7a557a5b6697cc3dee20d08c94445b8 281 Gene3D G3DSA:3.40.50.1820 1 280 7.5E-60 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_1073 e7a557a5b6697cc3dee20d08c94445b8 281 PRINTS PR00111 Alpha/beta hydrolase fold signature 225 239 9.8E-6 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 JDM601_1073 e7a557a5b6697cc3dee20d08c94445b8 281 PRINTS PR00111 Alpha/beta hydrolase fold signature 101 114 9.8E-6 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 JDM601_1073 e7a557a5b6697cc3dee20d08c94445b8 281 PRINTS PR00111 Alpha/beta hydrolase fold signature 57 72 9.8E-6 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 JDM601_1865 36f36e61139bbb5f41c4085702d36ad4 472 SUPERFAMILY SSF52540 169 465 4.71E-62 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_1865 36f36e61139bbb5f41c4085702d36ad4 472 Gene3D G3DSA:3.40.50.300 207 376 1.3E-41 T 12-10-2018 JDM601_1865 36f36e61139bbb5f41c4085702d36ad4 472 PIRSF PIRSF006485 34 469 8.5E-161 T 12-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 JDM601_1865 36f36e61139bbb5f41c4085702d36ad4 472 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 383 461 3.2E-26 T 12-10-2018 IPR032859 GTPase Der, C-terminal KH-domain-like JDM601_1865 36f36e61139bbb5f41c4085702d36ad4 472 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 259 274 7.6E-7 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 JDM601_1865 36f36e61139bbb5f41c4085702d36ad4 472 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 210 230 7.6E-7 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 JDM601_1865 36f36e61139bbb5f41c4085702d36ad4 472 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 36 190 8.5E-20 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 JDM601_1865 36f36e61139bbb5f41c4085702d36ad4 472 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 208 371 1.2E-23 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 JDM601_1865 36f36e61139bbb5f41c4085702d36ad4 472 Pfam PF01926 50S ribosome-binding GTPase 209 327 2.2E-21 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 JDM601_1865 36f36e61139bbb5f41c4085702d36ad4 472 Pfam PF01926 50S ribosome-binding GTPase 37 151 1.3E-21 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 JDM601_1865 36f36e61139bbb5f41c4085702d36ad4 472 SMART SM00382 33 196 0.011 T 12-10-2018 IPR003593 AAA+ ATPase domain JDM601_1865 36f36e61139bbb5f41c4085702d36ad4 472 SMART SM00382 206 348 0.25 T 12-10-2018 IPR003593 AAA+ ATPase domain JDM601_1865 36f36e61139bbb5f41c4085702d36ad4 472 Hamap MF_00195 GTPase Der [der]. 34 464 34.953 T 12-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 JDM601_1865 36f36e61139bbb5f41c4085702d36ad4 472 Gene3D G3DSA:3.30.300.20 383 464 2.3E-26 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta JDM601_1865 36f36e61139bbb5f41c4085702d36ad4 472 SUPERFAMILY SSF52540 36 197 8.96E-40 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_1865 36f36e61139bbb5f41c4085702d36ad4 472 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 35 461 5.6E-154 T 12-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 JDM601_1865 36f36e61139bbb5f41c4085702d36ad4 472 Gene3D G3DSA:3.40.50.300 34 193 4.2E-41 T 12-10-2018 JDM601_3139 2c3c1f8726f935d2889f4a990112dc5f 139 Pfam PF08310 LGFP repeat 50 99 1.5E-12 T 12-10-2018 IPR013207 LGFP JDM601_3139 2c3c1f8726f935d2889f4a990112dc5f 139 Pfam PF08310 LGFP repeat 101 129 7.8E-6 T 12-10-2018 IPR013207 LGFP JDM601_3140 43a59e11966bcbe6655e34cc4fd1ad29 365 Pfam PF00962 Adenosine/AMP deaminase 13 353 3.8E-100 T 12-10-2018 IPR001365 Adenosine/AMP deaminase domain GO:0019239 Reactome: R-HSA-74217 JDM601_3140 43a59e11966bcbe6655e34cc4fd1ad29 365 SUPERFAMILY SSF51556 3 346 5.26E-72 T 12-10-2018 IPR032466 Metal-dependent hydrolase JDM601_3140 43a59e11966bcbe6655e34cc4fd1ad29 365 TIGRFAM TIGR01430 aden_deam: adenosine deaminase 14 354 6.2E-72 T 12-10-2018 IPR006330 Adenosine/adenine deaminase GO:0019239 Reactome: R-HSA-74217 JDM601_3140 43a59e11966bcbe6655e34cc4fd1ad29 365 Gene3D G3DSA:3.20.20.140 2 363 4.4E-101 T 12-10-2018 JDM601_3140 43a59e11966bcbe6655e34cc4fd1ad29 365 Hamap MF_00540 Adenosine deaminase [add]. 8 356 53.585 T 12-10-2018 IPR028893 Adenosine deaminase GO:0004000|GO:0009168 KEGG: 00230+3.5.4.4|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-74217 JDM601_0194 787df42b7cab1507b9b1dad40c0c7523 490 Gene3D G3DSA:3.40.309.10 259 449 2.3E-185 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 JDM601_0194 787df42b7cab1507b9b1dad40c0c7523 490 Gene3D G3DSA:3.40.605.10 27 478 2.3E-185 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 JDM601_0194 787df42b7cab1507b9b1dad40c0c7523 490 SUPERFAMILY SSF53720 7 482 1.57E-155 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 JDM601_0194 787df42b7cab1507b9b1dad40c0c7523 490 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 255 262 - T 12-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 JDM601_0194 787df42b7cab1507b9b1dad40c0c7523 490 Pfam PF00171 Aldehyde dehydrogenase family 18 480 3.8E-163 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 JDM601_3284 5068a9d24c4512125ff4483074c69312 37 ProSitePatterns PS00828 Ribosomal protein L36 signature. 11 36 - T 12-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JDM601_3284 5068a9d24c4512125ff4483074c69312 37 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 10 37 4.0E-9 T 12-10-2018 JDM601_3284 5068a9d24c4512125ff4483074c69312 37 Pfam PF00444 Ribosomal protein L36 2 37 4.7E-17 T 12-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JDM601_3284 5068a9d24c4512125ff4483074c69312 37 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 37 16.573 T 12-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JDM601_3284 5068a9d24c4512125ff4483074c69312 37 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 2 37 1.2E-20 T 12-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JDM601_3284 5068a9d24c4512125ff4483074c69312 37 SUPERFAMILY SSF57840 2 37 6.93E-16 T 12-10-2018 IPR035977 Ribosomal protein L36 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JDM601_3262 85c42a6e833547be77039f77294795ea 607 Gene3D G3DSA:3.30.300.30 457 588 1.5E-38 T 12-10-2018 JDM601_3262 85c42a6e833547be77039f77294795ea 607 SUPERFAMILY SSF56801 12 570 4.45E-101 T 12-10-2018 JDM601_3262 85c42a6e833547be77039f77294795ea 607 Gene3D G3DSA:3.40.50.12780 3 456 1.4E-146 T 12-10-2018 JDM601_3262 85c42a6e833547be77039f77294795ea 607 Pfam PF00501 AMP-binding enzyme 19 462 1.3E-77 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 JDM601_1777 9289dadc5112c21b2b96f7ea5a32674e 87 SUPERFAMILY SSF101386 2 87 9.53E-21 T 12-10-2018 JDM601_1777 9289dadc5112c21b2b96f7ea5a32674e 87 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 4 86 2.1E-7 T 12-10-2018 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31 JDM601_1777 9289dadc5112c21b2b96f7ea5a32674e 87 Gene3D G3DSA:1.10.287.1080 1 87 8.9E-23 T 12-10-2018 JDM601_1777 9289dadc5112c21b2b96f7ea5a32674e 87 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 1 87 17.903 T 12-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 JDM601_1777 9289dadc5112c21b2b96f7ea5a32674e 87 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 5 87 7.1E-23 T 12-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 JDM601_3226 2bb27f35be2d0c5545a82c5d3875dbd5 270 SUPERFAMILY SSF48452 148 222 7.59E-6 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JDM601_3226 2bb27f35be2d0c5545a82c5d3875dbd5 270 SUPERFAMILY SSF48452 30 140 1.04E-7 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JDM601_3226 2bb27f35be2d0c5545a82c5d3875dbd5 270 Gene3D G3DSA:1.25.40.10 10 267 9.6E-11 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JDM601_0074 19811c6b28043ee7b20f12e27ca025aa 203 Gene3D G3DSA:1.10.357.10 51 203 9.2E-50 T 12-10-2018 JDM601_0074 19811c6b28043ee7b20f12e27ca025aa 203 SUPERFAMILY SSF46689 3 75 4.27E-15 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JDM601_0074 19811c6b28043ee7b20f12e27ca025aa 203 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 56 3.4E-11 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_0074 19811c6b28043ee7b20f12e27ca025aa 203 Gene3D G3DSA:1.10.10.60 1 50 5.4E-22 T 12-10-2018 JDM601_2628 9433fef665da161158401747804b09a9 301 SUPERFAMILY SSF56601 77 290 2.56E-17 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like JDM601_2628 9433fef665da161158401747804b09a9 301 Gene3D G3DSA:3.40.710.10 62 297 1.6E-21 T 12-10-2018 JDM601_4260 c1ab81b836f2c07b8fa7c0babda177f4 300 Gene3D G3DSA:3.40.50.720 102 247 1.5E-67 T 12-10-2018 JDM601_4260 c1ab81b836f2c07b8fa7c0babda177f4 300 SMART SM00829 3 292 0.002 T 12-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 JDM601_4260 c1ab81b836f2c07b8fa7c0babda177f4 300 SUPERFAMILY SSF51735 89 261 1.09E-38 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_4260 c1ab81b836f2c07b8fa7c0babda177f4 300 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 1 82 1.1E-9 T 12-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 JDM601_4260 c1ab81b836f2c07b8fa7c0babda177f4 300 SUPERFAMILY SSF50129 2 295 1.18E-18 T 12-10-2018 IPR011032 GroES-like superfamily JDM601_4260 c1ab81b836f2c07b8fa7c0babda177f4 300 Pfam PF00107 Zinc-binding dehydrogenase 126 260 2.9E-29 T 12-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 JDM601_4260 c1ab81b836f2c07b8fa7c0babda177f4 300 Gene3D G3DSA:3.90.180.10 1 295 1.5E-67 T 12-10-2018 JDM601_0582 096b99ef581a8f79fce426b351025d51 267 Gene3D G3DSA:3.10.129.90 1 267 5.9E-94 T 12-10-2018 JDM601_0582 096b99ef581a8f79fce426b351025d51 267 SUPERFAMILY SSF54637 119 265 9.22E-23 T 12-10-2018 IPR029069 HotDog domain superfamily JDM601_0582 096b99ef581a8f79fce426b351025d51 267 SUPERFAMILY SSF54637 4 112 5.13E-9 T 12-10-2018 IPR029069 HotDog domain superfamily JDM601_0582 096b99ef581a8f79fce426b351025d51 267 Pfam PF13622 Thioesterase-like superfamily 24 264 8.7E-44 T 12-10-2018 JDM601_1020 2ab5ec2b89189ea915ad7d9d2dc47787 405 ProSitePatterns PS00737 Thiolases signature 2. 350 366 - T 12-10-2018 IPR020613 Thiolase, conserved site GO:0016747 JDM601_1020 2ab5ec2b89189ea915ad7d9d2dc47787 405 Pfam PF02803 Thiolase, C-terminal domain 281 403 1.1E-47 T 12-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 JDM601_1020 2ab5ec2b89189ea915ad7d9d2dc47787 405 SUPERFAMILY SSF53901 3 281 1.24E-64 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 JDM601_1020 2ab5ec2b89189ea915ad7d9d2dc47787 405 Gene3D G3DSA:3.40.47.10 6 287 3.4E-132 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 JDM601_1020 2ab5ec2b89189ea915ad7d9d2dc47787 405 SUPERFAMILY SSF53901 282 403 3.73E-42 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 JDM601_1020 2ab5ec2b89189ea915ad7d9d2dc47787 405 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 402 1.2E-131 T 12-10-2018 IPR002155 Thiolase GO:0016747 JDM601_1020 2ab5ec2b89189ea915ad7d9d2dc47787 405 PIRSF PIRSF000429 2 405 1.4E-127 T 12-10-2018 IPR002155 Thiolase GO:0016747 JDM601_1020 2ab5ec2b89189ea915ad7d9d2dc47787 405 Pfam PF00108 Thiolase, N-terminal domain 5 272 2.4E-59 T 12-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 JDM601_1020 2ab5ec2b89189ea915ad7d9d2dc47787 405 Gene3D G3DSA:3.40.47.10 128 401 3.4E-132 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 JDM601_2416 4004a6bf06bf2d719e21e45954f54d1c 347 Pfam PF03969 AFG1-like ATPase 19 231 2.4E-59 T 12-10-2018 IPR005654 ATPase, AFG1-like GO:0005524 JDM601_2416 4004a6bf06bf2d719e21e45954f54d1c 347 Gene3D G3DSA:3.40.50.300 20 207 2.4E-16 T 12-10-2018 JDM601_2416 4004a6bf06bf2d719e21e45954f54d1c 347 SUPERFAMILY SSF52540 84 225 3.01E-10 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_0951 7606fc1319d5814bc6446b41fb9aae2e 95 Pfam PF05305 Protein of unknown function (DUF732) 2 93 4.9E-12 T 12-10-2018 IPR007969 Domain of unknown function DUF732 JDM601_0024 33830f419324ebdc3b6779bcc668b0f0 169 SUPERFAMILY SSF55729 20 150 6.56E-17 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase JDM601_0024 33830f419324ebdc3b6779bcc668b0f0 169 Pfam PF00583 Acetyltransferase (GNAT) family 38 143 1.3E-9 T 12-10-2018 IPR000182 GNAT domain JDM601_0024 33830f419324ebdc3b6779bcc668b0f0 169 Gene3D G3DSA:3.40.630.30 1 158 1.3E-44 T 12-10-2018 JDM601_1030 d0753c0c36b679d90d49ac5c81c7a7d8 673 Gene3D G3DSA:3.40.30.10 2 163 9.0E-60 T 12-10-2018 JDM601_1030 d0753c0c36b679d90d49ac5c81c7a7d8 673 SUPERFAMILY SSF48208 188 523 6.6E-61 T 12-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 JDM601_1030 d0753c0c36b679d90d49ac5c81c7a7d8 673 Pfam PF03190 Protein of unknown function, DUF255 3 157 1.2E-67 T 12-10-2018 IPR004879 Domain of unknown function DUF255 JDM601_1030 d0753c0c36b679d90d49ac5c81c7a7d8 673 SUPERFAMILY SSF52833 3 133 1.47E-26 T 12-10-2018 IPR036249 Thioredoxin-like superfamily JDM601_1030 d0753c0c36b679d90d49ac5c81c7a7d8 673 PIRSF PIRSF006402 1 664 3.9E-183 T 12-10-2018 IPR024705 Spermatogenesis-associated protein 20 JDM601_3287 639638f953facc8cc840473ed4398054 331 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 2 318 3.0E-138 T 12-10-2018 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|KEGG: 00525+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 JDM601_3287 639638f953facc8cc840473ed4398054 331 Gene3D G3DSA:3.90.25.10 184 311 2.9E-111 T 12-10-2018 JDM601_3287 639638f953facc8cc840473ed4398054 331 Gene3D G3DSA:3.40.50.720 4 298 2.9E-111 T 12-10-2018 JDM601_3287 639638f953facc8cc840473ed4398054 331 SUPERFAMILY SSF51735 1 321 9.05E-88 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_3287 639638f953facc8cc840473ed4398054 331 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 303 2.4E-75 T 12-10-2018 IPR016040 NAD(P)-binding domain JDM601_3530 06f4f07fff23f17989765634eb7f715b 371 Gene3D G3DSA:3.40.190.10 55 357 1.1E-113 T 12-10-2018 JDM601_3530 06f4f07fff23f17989765634eb7f715b 371 Pfam PF12849 PBP superfamily domain 49 337 3.7E-54 T 12-10-2018 IPR024370 PBP domain JDM601_3530 06f4f07fff23f17989765634eb7f715b 371 PIRSF PIRSF002756 8 371 5.5E-110 T 12-10-2018 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 JDM601_3530 06f4f07fff23f17989765634eb7f715b 371 SUPERFAMILY SSF53850 51 370 1.63E-83 T 12-10-2018 JDM601_3530 06f4f07fff23f17989765634eb7f715b 371 TIGRFAM TIGR00975 3a0107s03: phosphate ABC transporter, phosphate-binding protein PstS 52 370 2.7E-104 T 12-10-2018 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 JDM601_3530 06f4f07fff23f17989765634eb7f715b 371 Gene3D G3DSA:3.40.190.10 133 312 1.1E-113 T 12-10-2018 JDM601_1489 9d9cff2d07f57ce24bfae065f60b7202 226 PIRSF PIRSF000709 1 181 4.3E-13 T 12-10-2018 JDM601_1489 9d9cff2d07f57ce24bfae065f60b7202 226 SMART SM00855 5 166 3.4E-20 T 12-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 JDM601_1489 9d9cff2d07f57ce24bfae065f60b7202 226 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 6 204 7.4E-51 T 12-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 JDM601_1489 9d9cff2d07f57ce24bfae065f60b7202 226 Gene3D G3DSA:3.40.50.1240 1 226 9.0E-82 T 12-10-2018 IPR029033 Histidine phosphatase superfamily JDM601_1489 9d9cff2d07f57ce24bfae065f60b7202 226 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 8 17 - T 12-10-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824 JDM601_1489 9d9cff2d07f57ce24bfae065f60b7202 226 SUPERFAMILY SSF53254 4 194 3.6E-52 T 12-10-2018 IPR029033 Histidine phosphatase superfamily JDM601_2182 cdc7e8d7e61b06716408052aa98abb64 75 Pfam PF07311 Dodecin 3 65 4.6E-20 T 12-10-2018 IPR009923 Dodecin JDM601_2182 cdc7e8d7e61b06716408052aa98abb64 75 Gene3D G3DSA:3.30.1660.10 1 70 3.0E-28 T 12-10-2018 IPR025543 Dodecin-like JDM601_2182 cdc7e8d7e61b06716408052aa98abb64 75 SUPERFAMILY SSF89807 3 67 3.53E-19 T 12-10-2018 IPR036694 Dodecin-like superfamily JDM601_3856 276943e581c57ec4aa5ec9a5f3883b85 572 Gene3D G3DSA:3.20.20.80 87 497 1.7E-164 T 12-10-2018 JDM601_3856 276943e581c57ec4aa5ec9a5f3883b85 572 Gene3D G3DSA:1.10.10.760 429 469 1.7E-164 T 12-10-2018 JDM601_3856 276943e581c57ec4aa5ec9a5f3883b85 572 SUPERFAMILY SSF51445 75 498 2.65E-100 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily JDM601_3856 276943e581c57ec4aa5ec9a5f3883b85 572 TIGRFAM TIGR02402 trehalose_TreZ: malto-oligosyltrehalose trehalohydrolase 3 541 1.8E-229 T 12-10-2018 IPR012768 Malto-oligosyltrehalose trehalohydrolase GO:0004553|GO:0005992 KEGG: 00500+3.2.1.141|MetaCyc: PWY-2661 JDM601_3856 276943e581c57ec4aa5ec9a5f3883b85 572 Gene3D G3DSA:2.60.40.10 1 77 6.0E-18 T 12-10-2018 IPR013783 Immunoglobulin-like fold JDM601_3856 276943e581c57ec4aa5ec9a5f3883b85 572 Pfam PF11941 Domain of unknown function (DUF3459) 489 570 6.5E-14 T 12-10-2018 IPR022567 Glycosyl hydrolase, C-terminal (DUF3459) JDM601_3856 276943e581c57ec4aa5ec9a5f3883b85 572 SUPERFAMILY SSF81296 3 76 1.94E-13 T 12-10-2018 IPR014756 Immunoglobulin E-set JDM601_3856 276943e581c57ec4aa5ec9a5f3883b85 572 Pfam PF00128 Alpha amylase, catalytic domain 111 204 9.8E-12 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 JDM601_3856 276943e581c57ec4aa5ec9a5f3883b85 572 SMART SM00642 99 444 6.3E-8 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 JDM601_3856 276943e581c57ec4aa5ec9a5f3883b85 572 PIRSF PIRSF006337 1 571 1.1E-227 T 12-10-2018 IPR012768 Malto-oligosyltrehalose trehalohydrolase GO:0004553|GO:0005992 KEGG: 00500+3.2.1.141|MetaCyc: PWY-2661 JDM601_4286 f22830ed913aecf0528b3a961e45c66c 244 Pfam PF02405 Permease MlaE 27 230 7.1E-53 T 12-10-2018 IPR030802 ABC transporter permease MalE GO:0043190 JDM601_0403 ea9aa00210e187b70125265b5c828a38 197 PIRSF PIRSF004749 1 182 3.9E-37 T 12-10-2018 IPR023635 Peptide deformylase JDM601_0403 ea9aa00210e187b70125265b5c828a38 197 Hamap MF_00163 Peptide deformylase [def]. 2 177 26.309 T 12-10-2018 IPR023635 Peptide deformylase JDM601_0403 ea9aa00210e187b70125265b5c828a38 197 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 29 164 3.6E-31 T 12-10-2018 IPR023635 Peptide deformylase JDM601_0403 ea9aa00210e187b70125265b5c828a38 197 Gene3D G3DSA:3.90.45.10 1 197 4.9E-71 T 12-10-2018 IPR036821 Peptide deformylase superfamily JDM601_0403 ea9aa00210e187b70125265b5c828a38 197 SUPERFAMILY SSF56420 3 188 6.02E-48 T 12-10-2018 IPR036821 Peptide deformylase superfamily JDM601_0403 ea9aa00210e187b70125265b5c828a38 197 Pfam PF01327 Polypeptide deformylase 5 163 2.1E-37 T 12-10-2018 IPR023635 Peptide deformylase JDM601_0403 ea9aa00210e187b70125265b5c828a38 197 PRINTS PR01576 Peptide deformylase signature 135 164 3.9E-30 T 12-10-2018 IPR023635 Peptide deformylase JDM601_0403 ea9aa00210e187b70125265b5c828a38 197 PRINTS PR01576 Peptide deformylase signature 104 115 3.9E-30 T 12-10-2018 IPR023635 Peptide deformylase JDM601_0403 ea9aa00210e187b70125265b5c828a38 197 PRINTS PR01576 Peptide deformylase signature 116 134 3.9E-30 T 12-10-2018 IPR023635 Peptide deformylase JDM601_0403 ea9aa00210e187b70125265b5c828a38 197 PRINTS PR01576 Peptide deformylase signature 38 67 3.9E-30 T 12-10-2018 IPR023635 Peptide deformylase JDM601_2387 252ab382dfc3f55dbd454bd8a8a97e66 281 Pfam PF13622 Thioesterase-like superfamily 25 269 2.5E-56 T 12-10-2018 JDM601_2387 252ab382dfc3f55dbd454bd8a8a97e66 281 SUPERFAMILY SSF54637 114 273 2.28E-46 T 12-10-2018 IPR029069 HotDog domain superfamily JDM601_2387 252ab382dfc3f55dbd454bd8a8a97e66 281 TIGRFAM TIGR00189 tesB: acyl-CoA thioesterase II 7 271 2.1E-92 T 12-10-2018 IPR003703 Acyl-CoA thioesterase GO:0006637|GO:0047617 Reactome: R-HSA-193368|Reactome: R-HSA-2046106|Reactome: R-HSA-389887|Reactome: R-HSA-390247|Reactome: R-HSA-9033241 JDM601_2387 252ab382dfc3f55dbd454bd8a8a97e66 281 Gene3D G3DSA:3.10.129.90 1 279 1.2E-107 T 12-10-2018 JDM601_2387 252ab382dfc3f55dbd454bd8a8a97e66 281 SUPERFAMILY SSF54637 5 106 2.57E-34 T 12-10-2018 IPR029069 HotDog domain superfamily JDM601_4190 d0785510cd782ce22a878977e943cfc8 685 Pfam PF01757 Acyltransferase family 28 387 5.4E-19 T 12-10-2018 IPR002656 Acyltransferase 3 GO:0016747 JDM601_4190 d0785510cd782ce22a878977e943cfc8 685 SUPERFAMILY SSF52266 471 684 4.21E-17 T 12-10-2018 JDM601_4190 d0785510cd782ce22a878977e943cfc8 685 Gene3D G3DSA:3.40.50.1110 453 685 9.3E-15 T 12-10-2018 IPR036514 SGNH hydrolase superfamily JDM601_4247 763ed71470dbb7c3da596ac57cac09c4 524 Gene3D G3DSA:3.50.50.60 339 523 5.6E-58 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_4247 763ed71470dbb7c3da596ac57cac09c4 524 Gene3D G3DSA:3.50.50.60 1 295 1.4E-66 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_4247 763ed71470dbb7c3da596ac57cac09c4 524 Pfam PF00743 Flavin-binding monooxygenase-like 1 196 2.8E-13 T 12-10-2018 IPR020946 Flavin monooxygenase-like GO:0004499|GO:0050660|GO:0050661|GO:0055114 JDM601_4247 763ed71470dbb7c3da596ac57cac09c4 524 SUPERFAMILY SSF51905 135 368 2.16E-48 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_4247 763ed71470dbb7c3da596ac57cac09c4 524 SUPERFAMILY SSF51905 1 216 5.83E-50 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_4247 763ed71470dbb7c3da596ac57cac09c4 524 SUPERFAMILY SSF51905 305 518 5.61E-29 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_1427 13869ad95b17b604d4f757d78f44358c 448 ProSitePatterns PS00217 Sugar transport proteins signature 2. 115 140 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 JDM601_1427 13869ad95b17b604d4f757d78f44358c 448 Gene3D G3DSA:1.20.1250.20 3 432 3.2E-70 T 12-10-2018 JDM601_1427 13869ad95b17b604d4f757d78f44358c 448 ProSitePatterns PS00216 Sugar transport proteins signature 1. 292 309 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 JDM601_1427 13869ad95b17b604d4f757d78f44358c 448 Pfam PF00083 Sugar (and other) transporter 8 206 2.0E-30 T 12-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 JDM601_1427 13869ad95b17b604d4f757d78f44358c 448 Pfam PF00083 Sugar (and other) transporter 221 425 3.8E-13 T 12-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 JDM601_1427 13869ad95b17b604d4f757d78f44358c 448 SUPERFAMILY SSF103473 3 424 9.81E-63 T 12-10-2018 IPR036259 MFS transporter superfamily JDM601_0787 7ecc2fc0fa8718f42e4427e92974b3ad 191 SUPERFAMILY SSF53335 5 183 4.0E-31 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JDM601_0787 7ecc2fc0fa8718f42e4427e92974b3ad 191 Gene3D G3DSA:3.40.50.150 3 172 9.0E-33 T 12-10-2018 JDM601_0787 7ecc2fc0fa8718f42e4427e92974b3ad 191 Pfam PF13649 Methyltransferase domain 36 129 2.5E-17 T 12-10-2018 JDM601_1478 442dfa2e6c4af22dea9c148774e16f06 286 SUPERFAMILY SSF53613 4 278 4.37E-61 T 12-10-2018 IPR029056 Ribokinase-like JDM601_1478 442dfa2e6c4af22dea9c148774e16f06 286 PRINTS PR00990 Ribokinase signature 7 28 1.2E-32 T 12-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 JDM601_1478 442dfa2e6c4af22dea9c148774e16f06 286 PRINTS PR00990 Ribokinase signature 105 118 1.2E-32 T 12-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 JDM601_1478 442dfa2e6c4af22dea9c148774e16f06 286 PRINTS PR00990 Ribokinase signature 171 186 1.2E-32 T 12-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 JDM601_1478 442dfa2e6c4af22dea9c148774e16f06 286 PRINTS PR00990 Ribokinase signature 196 207 1.2E-32 T 12-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 JDM601_1478 442dfa2e6c4af22dea9c148774e16f06 286 PRINTS PR00990 Ribokinase signature 34 53 1.2E-32 T 12-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 JDM601_1478 442dfa2e6c4af22dea9c148774e16f06 286 Hamap MF_01987 Ribokinase [rbsK]. 3 278 22.767 T 12-10-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 JDM601_1478 442dfa2e6c4af22dea9c148774e16f06 286 Pfam PF00294 pfkB family carbohydrate kinase 4 271 8.9E-48 T 12-10-2018 IPR011611 Carbohydrate kinase PfkB JDM601_1478 442dfa2e6c4af22dea9c148774e16f06 286 Gene3D G3DSA:3.40.1190.20 3 283 1.9E-77 T 12-10-2018 IPR029056 Ribokinase-like JDM601_3573 edc1ebaf549f8db36d1c12e087f74e30 224 TIGRFAM TIGR01737 FGAM_synth_I: phosphoribosylformylglycinamidine synthase I 3 219 5.3E-80 T 12-10-2018 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 JDM601_3573 edc1ebaf549f8db36d1c12e087f74e30 224 PIRSF PIRSF001586 1 223 5.6E-77 T 12-10-2018 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 JDM601_3573 edc1ebaf549f8db36d1c12e087f74e30 224 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 3 205 1.3E-34 T 12-10-2018 JDM601_3573 edc1ebaf549f8db36d1c12e087f74e30 224 Hamap MF_00421 Phosphoribosylformylglycinamidine synthase subunit PurQ [purQ]. 3 219 38.976 T 12-10-2018 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 JDM601_3573 edc1ebaf549f8db36d1c12e087f74e30 224 SMART SM01211 2 221 1.7E-119 T 12-10-2018 JDM601_3573 edc1ebaf549f8db36d1c12e087f74e30 224 SUPERFAMILY SSF52317 3 220 2.29E-68 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like JDM601_3573 edc1ebaf549f8db36d1c12e087f74e30 224 Gene3D G3DSA:3.40.50.880 2 221 9.0E-62 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like JDM601_3028 7e95690a154737123d4e6508974690cb 700 PIRSF PIRSF006107 8 700 1.2E-172 T 12-10-2018 IPR016475 Phosphate acetyltransferase, bacteria GO:0008959 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 JDM601_3028 7e95690a154737123d4e6508974690cb 700 TIGRFAM TIGR00651 pta: phosphate acetyltransferase 391 692 1.1E-119 T 12-10-2018 IPR004614 Phosphate acetyltransferase GO:0016407 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 JDM601_3028 7e95690a154737123d4e6508974690cb 700 Pfam PF07085 DRTGG domain 217 330 3.7E-25 T 12-10-2018 IPR010766 DRTGG KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 JDM601_3028 7e95690a154737123d4e6508974690cb 700 Gene3D G3DSA:3.40.50.10750 515 668 2.5E-136 T 12-10-2018 JDM601_3028 7e95690a154737123d4e6508974690cb 700 Gene3D G3DSA:3.40.50.300 11 207 5.8E-11 T 12-10-2018 JDM601_3028 7e95690a154737123d4e6508974690cb 700 Gene3D G3DSA:3.40.1390.20 208 352 4.7E-20 T 12-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily JDM601_3028 7e95690a154737123d4e6508974690cb 700 Pfam PF13500 AAA domain 11 191 6.6E-17 T 12-10-2018 JDM601_3028 7e95690a154737123d4e6508974690cb 700 SUPERFAMILY SSF53659 376 696 1.85E-90 T 12-10-2018 JDM601_3028 7e95690a154737123d4e6508974690cb 700 Gene3D G3DSA:3.40.50.10950 382 695 2.5E-136 T 12-10-2018 JDM601_3028 7e95690a154737123d4e6508974690cb 700 Pfam PF01515 Phosphate acetyl/butaryl transferase 375 692 1.3E-125 T 12-10-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 JDM601_3028 7e95690a154737123d4e6508974690cb 700 SUPERFAMILY SSF52540 11 189 1.27E-14 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_3028 7e95690a154737123d4e6508974690cb 700 SUPERFAMILY SSF75138 212 338 1.84E-21 T 12-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily JDM601_2519 f72406518db468b5695d290b07a91506 1058 Gene3D G3DSA:2.40.50.100 483 549 4.3E-7 T 12-10-2018 JDM601_2519 f72406518db468b5695d290b07a91506 1058 Gene3D G3DSA:3.30.470.20 207 474 4.1E-86 T 12-10-2018 JDM601_2519 f72406518db468b5695d290b07a91506 1058 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 120 325 1.0E-49 T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 JDM601_2519 f72406518db468b5695d290b07a91506 1058 SUPERFAMILY SSF51230 484 546 3.14E-6 T 12-10-2018 IPR011053 Single hybrid motif JDM601_2519 f72406518db468b5695d290b07a91506 1058 Pfam PF00289 Biotin carboxylase, N-terminal domain 9 112 1.9E-35 T 12-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 JDM601_2519 f72406518db468b5695d290b07a91506 1058 SUPERFAMILY SSF51246 347 465 1.05E-25 T 12-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 JDM601_2519 f72406518db468b5695d290b07a91506 1058 Pfam PF01039 Carboxyl transferase domain 592 1050 1.1E-72 T 12-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 JDM601_2519 f72406518db468b5695d290b07a91506 1058 SMART SM00878 352 462 7.3E-36 T 12-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 JDM601_2519 f72406518db468b5695d290b07a91506 1058 Gene3D G3DSA:3.90.226.10 562 815 6.3E-77 T 12-10-2018 JDM601_2519 f72406518db468b5695d290b07a91506 1058 Gene3D G3DSA:3.40.50.20 9 135 2.4E-43 T 12-10-2018 JDM601_2519 f72406518db468b5695d290b07a91506 1058 SUPERFAMILY SSF56059 88 333 6.89E-51 T 12-10-2018 JDM601_2519 f72406518db468b5695d290b07a91506 1058 SUPERFAMILY SSF52440 6 117 2.01E-35 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily JDM601_2519 f72406518db468b5695d290b07a91506 1058 SUPERFAMILY SSF52096 786 1053 4.39E-57 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily JDM601_2519 f72406518db468b5695d290b07a91506 1058 Pfam PF02785 Biotin carboxylase C-terminal domain 352 462 1.1E-25 T 12-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 JDM601_2519 f72406518db468b5695d290b07a91506 1058 Gene3D G3DSA:3.90.226.10 817 1055 1.2E-67 T 12-10-2018 JDM601_2519 f72406518db468b5695d290b07a91506 1058 Gene3D G3DSA:3.30.1490.20 136 206 1.4E-15 T 12-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 JDM601_2519 f72406518db468b5695d290b07a91506 1058 SUPERFAMILY SSF52096 570 819 1.01E-55 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily JDM601_2519 f72406518db468b5695d290b07a91506 1058 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 288 295 - T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 JDM601_0096 54d7cbade8293fae60b7d94d13c3348d 284 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 161 180 6.5E-6 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0096 54d7cbade8293fae60b7d94d13c3348d 284 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 141 149 6.5E-6 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0096 54d7cbade8293fae60b7d94d13c3348d 284 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 88 99 6.5E-6 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0096 54d7cbade8293fae60b7d94d13c3348d 284 SUPERFAMILY SSF51735 2 241 1.97E-60 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_0096 54d7cbade8293fae60b7d94d13c3348d 284 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 4 195 1.0E-4 T 12-10-2018 JDM601_0096 54d7cbade8293fae60b7d94d13c3348d 284 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 148 176 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 JDM601_0096 54d7cbade8293fae60b7d94d13c3348d 284 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 205 225 3.0E-22 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0096 54d7cbade8293fae60b7d94d13c3348d 284 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 88 99 3.0E-22 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0096 54d7cbade8293fae60b7d94d13c3348d 284 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 161 180 3.0E-22 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0096 54d7cbade8293fae60b7d94d13c3348d 284 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 182 199 3.0E-22 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0096 54d7cbade8293fae60b7d94d13c3348d 284 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 135 151 3.0E-22 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0096 54d7cbade8293fae60b7d94d13c3348d 284 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 3.0E-22 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0096 54d7cbade8293fae60b7d94d13c3348d 284 Gene3D G3DSA:3.40.50.720 4 284 2.6E-73 T 12-10-2018 JDM601_0096 54d7cbade8293fae60b7d94d13c3348d 284 Pfam PF00106 short chain dehydrogenase 5 200 1.3E-38 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_4057 2524d30648d16eda2356b5100095bfba 107 Pfam PF00893 Small Multidrug Resistance protein 1 94 7.8E-22 T 12-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 JDM601_4057 2524d30648d16eda2356b5100095bfba 107 Gene3D G3DSA:1.10.3730.20 1 106 1.6E-29 T 12-10-2018 JDM601_4057 2524d30648d16eda2356b5100095bfba 107 SUPERFAMILY SSF103481 6 104 6.93E-14 T 12-10-2018 JDM601_3646 89fe76e2fd6fcba75592da6a50d7c34b 517 Gene3D G3DSA:3.40.605.10 33 481 1.5E-143 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 JDM601_3646 89fe76e2fd6fcba75592da6a50d7c34b 517 Gene3D G3DSA:3.40.309.10 260 453 1.5E-143 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 JDM601_3646 89fe76e2fd6fcba75592da6a50d7c34b 517 Pfam PF00171 Aldehyde dehydrogenase family 27 481 1.4E-136 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 JDM601_3646 89fe76e2fd6fcba75592da6a50d7c34b 517 SUPERFAMILY SSF53720 33 482 1.02E-134 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 JDM601_3646 89fe76e2fd6fcba75592da6a50d7c34b 517 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 253 260 - T 12-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 JDM601_0016 b43475e18bdb385b42a561529664f343 410 PIRSF PIRSF000654 19 262 1.2E-25 T 12-10-2018 JDM601_0016 b43475e18bdb385b42a561529664f343 410 SUPERFAMILY SSF56112 10 301 2.56E-76 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily JDM601_0016 b43475e18bdb385b42a561529664f343 410 Pfam PF00069 Protein kinase domain 13 261 1.1E-46 T 12-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 JDM601_0016 b43475e18bdb385b42a561529664f343 410 Gene3D G3DSA:3.30.200.20 1 97 1.2E-37 T 12-10-2018 JDM601_0016 b43475e18bdb385b42a561529664f343 410 SMART SM00220 13 272 6.4E-63 T 12-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 JDM601_0016 b43475e18bdb385b42a561529664f343 410 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 137 149 - T 12-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 JDM601_0016 b43475e18bdb385b42a561529664f343 410 Gene3D G3DSA:1.10.510.10 99 282 4.1E-54 T 12-10-2018 JDM601_1078 2680419a1762f29a9c577eab828fe8a6 479 PIRSF PIRSF019251 1 475 2.8E-176 T 12-10-2018 IPR026281 HTH-type transcriptional regulator RamB GO:0006355 JDM601_1078 2680419a1762f29a9c577eab828fe8a6 479 SUPERFAMILY SSF47413 6 72 4.29E-14 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 JDM601_1078 2680419a1762f29a9c577eab828fe8a6 479 Pfam PF06114 IrrE N-terminal-like domain 191 314 2.3E-15 T 12-10-2018 IPR010359 IrrE N-terminal-like domain JDM601_1078 2680419a1762f29a9c577eab828fe8a6 479 Pfam PF09856 Predicted transcriptional regulator (DUF2083) 315 471 8.2E-67 T 12-10-2018 IPR018653 Domain of unknown function DUF2083,transcriptional regulator JDM601_1078 2680419a1762f29a9c577eab828fe8a6 479 Pfam PF13560 Helix-turn-helix domain 11 60 1.0E-11 T 12-10-2018 JDM601_1078 2680419a1762f29a9c577eab828fe8a6 479 Gene3D G3DSA:1.10.260.40 7 90 3.8E-14 T 12-10-2018 JDM601_1078 2680419a1762f29a9c577eab828fe8a6 479 SMART SM00530 13 68 5.9E-14 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 JDM601_2035 fb47cb063fa96f7ad5f8932e7d777160 266 SUPERFAMILY SSF53474 3 255 2.01E-41 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_2035 fb47cb063fa96f7ad5f8932e7d777160 266 Gene3D G3DSA:3.40.50.1820 1 256 8.5E-42 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_2035 fb47cb063fa96f7ad5f8932e7d777160 266 Pfam PF12697 Alpha/beta hydrolase family 13 251 4.9E-20 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 JDM601_2986 d5f941bd3bc6e918d3400624c26d7502 228 SMART SM00862 149 225 2.6E-24 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 JDM601_2986 d5f941bd3bc6e918d3400624c26d7502 228 Pfam PF00072 Response regulator receiver domain 8 117 8.8E-30 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JDM601_2986 d5f941bd3bc6e918d3400624c26d7502 228 Gene3D G3DSA:1.10.10.10 129 228 5.1E-39 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JDM601_2986 d5f941bd3bc6e918d3400624c26d7502 228 SMART SM00448 6 116 2.5E-45 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JDM601_2986 d5f941bd3bc6e918d3400624c26d7502 228 Pfam PF00486 Transcriptional regulatory protein, C terminal 149 224 5.6E-26 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 JDM601_2986 d5f941bd3bc6e918d3400624c26d7502 228 SUPERFAMILY SSF52172 6 182 1.17E-43 T 12-10-2018 IPR011006 CheY-like superfamily JDM601_2986 d5f941bd3bc6e918d3400624c26d7502 228 Gene3D G3DSA:3.40.50.2300 3 128 1.7E-38 T 12-10-2018 JDM601_1112 4d4cc5f59f3759908b2d3cd7c33bf848 294 Gene3D G3DSA:3.40.50.720 4 265 2.7E-61 T 12-10-2018 JDM601_1112 4d4cc5f59f3759908b2d3cd7c33bf848 294 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 2.6E-16 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_1112 4d4cc5f59f3759908b2d3cd7c33bf848 294 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 2.6E-16 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_1112 4d4cc5f59f3759908b2d3cd7c33bf848 294 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 2.6E-16 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_1112 4d4cc5f59f3759908b2d3cd7c33bf848 294 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 2.6E-16 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_1112 4d4cc5f59f3759908b2d3cd7c33bf848 294 Pfam PF00106 short chain dehydrogenase 6 196 5.5E-41 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_1112 4d4cc5f59f3759908b2d3cd7c33bf848 294 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 143 171 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 JDM601_1112 4d4cc5f59f3759908b2d3cd7c33bf848 294 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 3.6E-5 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_1112 4d4cc5f59f3759908b2d3cd7c33bf848 294 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 3.6E-5 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_1112 4d4cc5f59f3759908b2d3cd7c33bf848 294 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 3.6E-5 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_1112 4d4cc5f59f3759908b2d3cd7c33bf848 294 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 5 186 0.0012 T 12-10-2018 JDM601_1112 4d4cc5f59f3759908b2d3cd7c33bf848 294 SUPERFAMILY SSF51735 5 255 6.16E-57 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_3462 42988f7c92fc242ab2b70f17fffc190b 143 PIRSF PIRSF021591 4 143 1.4E-44 T 12-10-2018 IPR016793 Uncharacterised conserved protein UCP021591 JDM601_2516 8bdea672b9ed4255471c94f95cfd134e 276 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 2.0E-19 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2516 8bdea672b9ed4255471c94f95cfd134e 276 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 2.0E-19 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2516 8bdea672b9ed4255471c94f95cfd134e 276 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 2.0E-19 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2516 8bdea672b9ed4255471c94f95cfd134e 276 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 2.0E-19 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2516 8bdea672b9ed4255471c94f95cfd134e 276 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 2.0E-19 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2516 8bdea672b9ed4255471c94f95cfd134e 276 Pfam PF00106 short chain dehydrogenase 9 193 1.7E-40 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2516 8bdea672b9ed4255471c94f95cfd134e 276 Gene3D G3DSA:3.40.50.720 3 264 7.7E-56 T 12-10-2018 JDM601_2516 8bdea672b9ed4255471c94f95cfd134e 276 SUPERFAMILY SSF51735 3 267 1.99E-52 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_3372 40a08b4abce45b38bfca0d3bf734cb97 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 163 182 8.0E-23 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3372 40a08b4abce45b38bfca0d3bf734cb97 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 76 87 8.0E-23 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3372 40a08b4abce45b38bfca0d3bf734cb97 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 137 153 8.0E-23 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3372 40a08b4abce45b38bfca0d3bf734cb97 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 218 238 8.0E-23 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3372 40a08b4abce45b38bfca0d3bf734cb97 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 8.0E-23 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3372 40a08b4abce45b38bfca0d3bf734cb97 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 184 201 8.0E-23 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3372 40a08b4abce45b38bfca0d3bf734cb97 257 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 150 178 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 JDM601_3372 40a08b4abce45b38bfca0d3bf734cb97 257 Gene3D G3DSA:3.40.50.720 1 255 4.8E-66 T 12-10-2018 JDM601_3372 40a08b4abce45b38bfca0d3bf734cb97 257 Pfam PF00106 short chain dehydrogenase 7 204 3.8E-41 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3372 40a08b4abce45b38bfca0d3bf734cb97 257 SUPERFAMILY SSF51735 4 252 6.53E-57 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_3372 40a08b4abce45b38bfca0d3bf734cb97 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 76 87 2.9E-6 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3372 40a08b4abce45b38bfca0d3bf734cb97 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 163 182 2.9E-6 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3372 40a08b4abce45b38bfca0d3bf734cb97 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 143 151 2.9E-6 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2855 2ce540aa343849c985fde0f0f9254fb2 204 Gene3D G3DSA:1.10.357.10 61 204 1.5E-25 T 12-10-2018 JDM601_2855 2ce540aa343849c985fde0f0f9254fb2 204 SUPERFAMILY SSF48498 85 203 4.23E-27 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily JDM601_2855 2ce540aa343849c985fde0f0f9254fb2 204 Pfam PF00440 Bacterial regulatory proteins, tetR family 20 64 8.6E-17 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_2855 2ce540aa343849c985fde0f0f9254fb2 204 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 18 31 2.0E-9 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_2855 2ce540aa343849c985fde0f0f9254fb2 204 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 39 62 2.0E-9 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_2855 2ce540aa343849c985fde0f0f9254fb2 204 Gene3D G3DSA:1.10.10.60 6 60 4.2E-19 T 12-10-2018 JDM601_2855 2ce540aa343849c985fde0f0f9254fb2 204 SUPERFAMILY SSF46689 9 80 1.39E-19 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JDM601_0002 d6ce484d528f41dd8455f15acacd9860 398 Gene3D G3DSA:3.10.150.10 264 398 1.4E-49 T 12-10-2018 JDM601_0002 d6ce484d528f41dd8455f15acacd9860 398 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 14 130 6.7E-36 T 12-10-2018 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 JDM601_0002 d6ce484d528f41dd8455f15acacd9860 398 SUPERFAMILY SSF55979 14 130 7.85E-23 T 12-10-2018 JDM601_0002 d6ce484d528f41dd8455f15acacd9860 398 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 14 396 8.5E-109 T 12-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 JDM601_0002 d6ce484d528f41dd8455f15acacd9860 398 Gene3D G3DSA:3.10.150.10 134 263 1.1E-33 T 12-10-2018 JDM601_0002 d6ce484d528f41dd8455f15acacd9860 398 SUPERFAMILY SSF55979 139 262 1.26E-19 T 12-10-2018 JDM601_0002 d6ce484d528f41dd8455f15acacd9860 398 PIRSF PIRSF000804 13 397 2.9E-91 T 12-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 JDM601_0002 d6ce484d528f41dd8455f15acacd9860 398 Pfam PF02767 DNA polymerase III beta subunit, central domain 139 259 1.4E-33 T 12-10-2018 IPR022637 DNA polymerase III, beta sliding clamp, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 JDM601_0002 d6ce484d528f41dd8455f15acacd9860 398 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 261 371 9.4E-35 T 12-10-2018 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 JDM601_0002 d6ce484d528f41dd8455f15acacd9860 398 SMART SM00480 29 375 8.3E-135 T 12-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 JDM601_0002 d6ce484d528f41dd8455f15acacd9860 398 SUPERFAMILY SSF55979 261 396 2.02E-27 T 12-10-2018 JDM601_0002 d6ce484d528f41dd8455f15acacd9860 398 Gene3D G3DSA:3.10.150.10 1 133 4.0E-49 T 12-10-2018 JDM601_2044 f8bb15cff5f34aee64116030a1b0099c 95 SUPERFAMILY SSF51735 2 75 2.01E-6 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_2044 f8bb15cff5f34aee64116030a1b0099c 95 Gene3D G3DSA:3.40.50.720 1 92 1.4E-16 T 12-10-2018 JDM601_1310 e69525693891c6dad7d9c832c4d2a270 121 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 4 84 4.7E-22 T 12-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 JDM601_1310 e69525693891c6dad7d9c832c4d2a270 121 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 4 109 2.7E-22 T 12-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 JDM601_1310 e69525693891c6dad7d9c832c4d2a270 121 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 2 119 15.84 T 12-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 JDM601_1310 e69525693891c6dad7d9c832c4d2a270 121 Gene3D G3DSA:2.60.15.10 1 90 3.6E-23 T 12-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 JDM601_1310 e69525693891c6dad7d9c832c4d2a270 121 SUPERFAMILY SSF51344 4 84 2.35E-17 T 12-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 JDM601_1310 e69525693891c6dad7d9c832c4d2a270 121 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 17 83 1.0E-17 T 12-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 JDM601_1630 22184344b11c85dca59b5f806b862907 215 ProSitePatterns PS00155 Cutinase, serine active site. 108 120 - T 12-10-2018 IPR011150 Cutinase, monofunctional GO:0005576|GO:0050525 JDM601_1630 22184344b11c85dca59b5f806b862907 215 Pfam PF01083 Cutinase 34 212 3.2E-46 T 12-10-2018 IPR000675 Cutinase/acetylxylan esterase GO:0016787 JDM601_1630 22184344b11c85dca59b5f806b862907 215 Gene3D G3DSA:3.40.50.1820 1 214 2.5E-52 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_1630 22184344b11c85dca59b5f806b862907 215 SMART SM01110 33 212 1.2E-68 T 12-10-2018 IPR000675 Cutinase/acetylxylan esterase GO:0016787 JDM601_1630 22184344b11c85dca59b5f806b862907 215 SUPERFAMILY SSF53474 34 212 7.84E-37 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_2325 1f9e40bbb989b194fcde78613a260afb 247 Gene3D G3DSA:1.10.10.10 8 84 7.6E-18 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JDM601_2325 1f9e40bbb989b194fcde78613a260afb 247 SUPERFAMILY SSF64288 65 244 4.4E-36 T 12-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily JDM601_2325 1f9e40bbb989b194fcde78613a260afb 247 SUPERFAMILY SSF46785 10 81 8.31E-16 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JDM601_2325 1f9e40bbb989b194fcde78613a260afb 247 Pfam PF00392 Bacterial regulatory proteins, gntR family 17 77 2.4E-15 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 JDM601_2325 1f9e40bbb989b194fcde78613a260afb 247 SMART SM00345 20 77 3.4E-14 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 JDM601_2325 1f9e40bbb989b194fcde78613a260afb 247 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 37 51 1.2E-9 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 JDM601_2325 1f9e40bbb989b194fcde78613a260afb 247 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 51 67 1.2E-9 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 JDM601_2325 1f9e40bbb989b194fcde78613a260afb 247 SMART SM00866 97 237 2.9E-28 T 12-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 JDM601_2325 1f9e40bbb989b194fcde78613a260afb 247 Gene3D G3DSA:3.40.1410.10 97 245 2.1E-31 T 12-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily JDM601_2325 1f9e40bbb989b194fcde78613a260afb 247 Pfam PF07702 UTRA domain 101 236 1.3E-29 T 12-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 JDM601_2202 ffbf62b8474109f504627b14764d0d84 348 SUPERFAMILY SSF53474 69 191 1.17E-5 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_2202 ffbf62b8474109f504627b14764d0d84 348 Pfam PF08237 PE-PPE domain 78 282 8.3E-46 T 12-10-2018 IPR013228 PE-PPE, C-terminal JDM601_0909 15ce191a4ec3b93d307052b2cdbc0965 466 Gene3D G3DSA:3.40.50.300 50 258 8.3E-28 T 12-10-2018 JDM601_0909 15ce191a4ec3b93d307052b2cdbc0965 466 SUPERFAMILY SSF52540 50 343 2.48E-26 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_0909 15ce191a4ec3b93d307052b2cdbc0965 466 Pfam PF00158 Sigma-54 interaction domain 178 235 4.2E-5 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 JDM601_0660 42c7f7a3a17a092502795749a2a15bc4 166 Pfam PF13452 N-terminal half of MaoC dehydratase 15 137 1.4E-25 T 12-10-2018 IPR039569 N-terminal of MaoC-like dehydratase Reactome: R-HSA-193368|Reactome: R-HSA-2046106|Reactome: R-HSA-389887|Reactome: R-HSA-390247|Reactome: R-HSA-9033241|Reactome: R-HSA-9033500 JDM601_0660 42c7f7a3a17a092502795749a2a15bc4 166 Gene3D G3DSA:3.10.129.10 1 153 4.0E-38 T 12-10-2018 JDM601_0660 42c7f7a3a17a092502795749a2a15bc4 166 SUPERFAMILY SSF54637 13 144 9.68E-30 T 12-10-2018 IPR029069 HotDog domain superfamily JDM601_0660 42c7f7a3a17a092502795749a2a15bc4 166 PIRSF PIRSF018072 1 150 7.7E-49 T 12-10-2018 IPR016709 Uncharacterised protein family UPF0336 JDM601_0660 42c7f7a3a17a092502795749a2a15bc4 166 Hamap MF_00799 UPF0336 protein . 1 148 32.135 T 12-10-2018 IPR016709 Uncharacterised protein family UPF0336 JDM601_2465 6d1996486451c22cef572dda5a81a60b 386 SUPERFAMILY SSF47203 234 384 2.74E-48 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 JDM601_2465 6d1996486451c22cef572dda5a81a60b 386 Gene3D G3DSA:1.20.140.10 244 386 2.2E-44 T 12-10-2018 JDM601_2465 6d1996486451c22cef572dda5a81a60b 386 SUPERFAMILY SSF56645 9 248 7.33E-83 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 JDM601_2465 6d1996486451c22cef572dda5a81a60b 386 Gene3D G3DSA:2.40.110.10 128 243 4.8E-42 T 12-10-2018 JDM601_2465 6d1996486451c22cef572dda5a81a60b 386 Gene3D G3DSA:1.10.540.10 4 127 3.5E-32 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 JDM601_2465 6d1996486451c22cef572dda5a81a60b 386 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 14 125 1.6E-31 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 JDM601_2465 6d1996486451c22cef572dda5a81a60b 386 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 343 362 - T 12-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 JDM601_2465 6d1996486451c22cef572dda5a81a60b 386 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 236 384 5.8E-45 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 JDM601_2465 6d1996486451c22cef572dda5a81a60b 386 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 129 224 3.4E-25 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 JDM601_4111 f2751adf4b447b066a154a82579a9221 202 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 20 33 5.0E-6 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_4111 f2751adf4b447b066a154a82579a9221 202 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 41 64 5.0E-6 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_4111 f2751adf4b447b066a154a82579a9221 202 Pfam PF00440 Bacterial regulatory proteins, tetR family 20 66 1.9E-10 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_4111 f2751adf4b447b066a154a82579a9221 202 SUPERFAMILY SSF46689 9 89 1.13E-14 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JDM601_4111 f2751adf4b447b066a154a82579a9221 202 Gene3D G3DSA:1.10.357.10 8 200 7.1E-25 T 12-10-2018 JDM601_4267 be2dffb1ab0ac6b81cd188a9ad7f31fd 318 Gene3D G3DSA:3.40.50.1820 13 315 1.9E-77 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_4267 be2dffb1ab0ac6b81cd188a9ad7f31fd 318 Pfam PF07859 alpha/beta hydrolase fold 82 288 6.3E-61 T 12-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 JDM601_4267 be2dffb1ab0ac6b81cd188a9ad7f31fd 318 SUPERFAMILY SSF53474 37 309 2.7E-64 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_4012 22aba838e16e4a0369db1d7cbab56b4e 424 Pfam PF12897 Alanine-glyoxylate amino-transferase 7 423 5.4E-189 T 12-10-2018 IPR024551 Aminotransferase, putative JDM601_4012 22aba838e16e4a0369db1d7cbab56b4e 424 SUPERFAMILY SSF53383 33 413 3.35E-41 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase JDM601_4012 22aba838e16e4a0369db1d7cbab56b4e 424 Gene3D G3DSA:3.90.1150.10 30 420 8.4E-173 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 JDM601_4012 22aba838e16e4a0369db1d7cbab56b4e 424 Gene3D G3DSA:3.40.640.10 59 303 8.4E-173 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 JDM601_0047 d0c3208bd5e20ae1aa61e0d954d959bb 613 SMART SM00382 359 501 5.5E-8 T 12-10-2018 IPR003593 AAA+ ATPase domain JDM601_0047 d0c3208bd5e20ae1aa61e0d954d959bb 613 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 363 498 1.8E-17 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 JDM601_0047 d0c3208bd5e20ae1aa61e0d954d959bb 613 Gene3D G3DSA:1.25.40.10 6 299 1.5E-55 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JDM601_0047 d0c3208bd5e20ae1aa61e0d954d959bb 613 SUPERFAMILY SSF52540 333 588 3.11E-33 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_0047 d0c3208bd5e20ae1aa61e0d954d959bb 613 Gene3D G3DSA:3.40.50.300 300 498 2.2E-47 T 12-10-2018 JDM601_0047 d0c3208bd5e20ae1aa61e0d954d959bb 613 Gene3D G3DSA:1.10.8.60 499 601 2.4E-9 T 12-10-2018 JDM601_0047 d0c3208bd5e20ae1aa61e0d954d959bb 613 PRINTS PR00819 CbxX/CfqX superfamily signature 469 486 9.9E-49 T 12-10-2018 IPR000641 CbxX/CfqX GO:0005524 JDM601_0047 d0c3208bd5e20ae1aa61e0d954d959bb 613 PRINTS PR00819 CbxX/CfqX superfamily signature 486 505 9.9E-49 T 12-10-2018 IPR000641 CbxX/CfqX GO:0005524 JDM601_0047 d0c3208bd5e20ae1aa61e0d954d959bb 613 PRINTS PR00819 CbxX/CfqX superfamily signature 400 414 9.9E-49 T 12-10-2018 IPR000641 CbxX/CfqX GO:0005524 JDM601_0047 d0c3208bd5e20ae1aa61e0d954d959bb 613 PRINTS PR00819 CbxX/CfqX superfamily signature 552 564 9.9E-49 T 12-10-2018 IPR000641 CbxX/CfqX GO:0005524 JDM601_0047 d0c3208bd5e20ae1aa61e0d954d959bb 613 PRINTS PR00819 CbxX/CfqX superfamily signature 414 433 9.9E-49 T 12-10-2018 IPR000641 CbxX/CfqX GO:0005524 JDM601_0047 d0c3208bd5e20ae1aa61e0d954d959bb 613 PRINTS PR00819 CbxX/CfqX superfamily signature 322 336 9.9E-49 T 12-10-2018 IPR000641 CbxX/CfqX GO:0005524 JDM601_0047 d0c3208bd5e20ae1aa61e0d954d959bb 613 PRINTS PR00819 CbxX/CfqX superfamily signature 362 377 9.9E-49 T 12-10-2018 IPR000641 CbxX/CfqX GO:0005524 JDM601_0047 d0c3208bd5e20ae1aa61e0d954d959bb 613 PRINTS PR00819 CbxX/CfqX superfamily signature 448 460 9.9E-49 T 12-10-2018 IPR000641 CbxX/CfqX GO:0005524 JDM601_0047 d0c3208bd5e20ae1aa61e0d954d959bb 613 TIGRFAM TIGR03922 T7SS_EccA: type VII secretion AAA-ATPase EccA 31 602 7.4E-215 T 12-10-2018 IPR023835 Type VII secretion system AAA-ATPase, EccA JDM601_3513 d30549022ee2b521c1619949e334fda9 292 TIGRFAM TIGR00750 lao: LAO/AO transport system ATPase 13 285 7.1E-74 T 12-10-2018 IPR005129 SIMIBI class G3E GTPase, ArgK/MeaB GO:0003924|GO:0005525 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 JDM601_3513 d30549022ee2b521c1619949e334fda9 292 SUPERFAMILY SSF52540 5 286 2.1E-61 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_3513 d30549022ee2b521c1619949e334fda9 292 Gene3D G3DSA:3.40.50.300 38 238 1.8E-73 T 12-10-2018 JDM601_3513 d30549022ee2b521c1619949e334fda9 292 Pfam PF03308 ArgK protein 20 250 3.7E-73 T 12-10-2018 JDM601_2285 b423834dc24d3092a90794b5618b2f3b 425 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 5 202 4.7E-71 T 12-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 JDM601_2285 b423834dc24d3092a90794b5618b2f3b 425 PIRSF PIRSF001259 2 413 3.7E-173 T 12-10-2018 JDM601_2285 b423834dc24d3092a90794b5618b2f3b 425 Pfam PF00925 GTP cyclohydrolase II 210 381 2.6E-72 T 12-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 JDM601_2285 b423834dc24d3092a90794b5618b2f3b 425 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 2 206 37.186 T 12-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 JDM601_2285 b423834dc24d3092a90794b5618b2f3b 425 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 8 200 2.6E-83 T 12-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 JDM601_2285 b423834dc24d3092a90794b5618b2f3b 425 Gene3D G3DSA:3.90.870.10 1 206 2.7E-90 T 12-10-2018 JDM601_2285 b423834dc24d3092a90794b5618b2f3b 425 TIGRFAM TIGR00505 ribA: GTP cyclohydrolase II 210 404 4.0E-75 T 12-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 JDM601_2285 b423834dc24d3092a90794b5618b2f3b 425 SUPERFAMILY SSF142695 207 384 6.02E-69 T 12-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 JDM601_2285 b423834dc24d3092a90794b5618b2f3b 425 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 207 407 40.353 T 12-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 JDM601_2285 b423834dc24d3092a90794b5618b2f3b 425 SUPERFAMILY SSF55821 5 208 4.35E-80 T 12-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily JDM601_2285 b423834dc24d3092a90794b5618b2f3b 425 Gene3D G3DSA:3.40.50.10990 207 385 5.7E-74 T 12-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 JDM601_2285 b423834dc24d3092a90794b5618b2f3b 425 Hamap MF_01283 Riboflavin biosynthesis protein RibBA [ribBA]. 3 403 56.918 T 12-10-2018 IPR016299 Riboflavin biosynthesis protein RibBA GO:0009231 KEGG: 00740+3.5.4.25+4.1.99.12|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 JDM601_0314 8cf181c698040252b7e035dbfb227f26 133 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 23 51 - T 12-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 JDM601_1222 827e1a1e255197faf14a8ea8a6015c47 200 Pfam PF00440 Bacterial regulatory proteins, tetR family 19 61 1.2E-15 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_1222 827e1a1e255197faf14a8ea8a6015c47 200 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 40 63 6.9E-8 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_1222 827e1a1e255197faf14a8ea8a6015c47 200 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 19 32 6.9E-8 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_1222 827e1a1e255197faf14a8ea8a6015c47 200 Gene3D G3DSA:1.10.357.10 8 194 2.1E-25 T 12-10-2018 JDM601_1222 827e1a1e255197faf14a8ea8a6015c47 200 SUPERFAMILY SSF46689 10 91 2.57E-19 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JDM601_1997 e23920b3fcd5cf40ee2d11dd4375dfb7 647 Pfam PF04734 Neutral/alkaline non-lysosomal ceramidase, N-terminal 1 481 1.5E-152 T 12-10-2018 IPR031329 Neutral/alkaline non-lysosomal ceramidase, N-terminal KEGG: 00600+3.5.1.23|MetaCyc: PWY-6483|MetaCyc: PWY-7119|Reactome: R-HSA-1660662 JDM601_1997 e23920b3fcd5cf40ee2d11dd4375dfb7 647 Gene3D G3DSA:2.60.40.2300 515 647 5.5E-41 T 12-10-2018 IPR038445 Neutral ceramidase, C-terminal domain superfamily KEGG: 00600+3.5.1.23|MetaCyc: PWY-6483|MetaCyc: PWY-7119 JDM601_1997 e23920b3fcd5cf40ee2d11dd4375dfb7 647 Pfam PF17048 Neutral/alkaline non-lysosomal ceramidase, C-terminal 486 643 1.8E-41 T 12-10-2018 IPR031331 Neutral/alkaline non-lysosomal ceramidase, C-terminal KEGG: 00600+3.5.1.23|MetaCyc: PWY-6483|MetaCyc: PWY-7119 JDM601_1071 9065ab637502ee942f1fc9e7c5acddf4 273 SUPERFAMILY SSF55073 106 271 1.57E-43 T 12-10-2018 IPR029787 Nucleotide cyclase JDM601_1071 9065ab637502ee942f1fc9e7c5acddf4 273 SMART SM00044 81 252 2.8E-6 T 12-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 JDM601_1071 9065ab637502ee942f1fc9e7c5acddf4 273 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 107 268 3.5E-21 T 12-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 JDM601_1071 9065ab637502ee942f1fc9e7c5acddf4 273 Gene3D G3DSA:3.30.70.1230 68 273 3.4E-73 T 12-10-2018 IPR029787 Nucleotide cyclase JDM601_2682 94d4090267a0c1bb6f747cd430b9418f 303 Hamap MF_02128 Thiamine-monophosphate kinase [thiL]. 1 301 24.799 T 12-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 JDM601_2682 94d4090267a0c1bb6f747cd430b9418f 303 PIRSF PIRSF005303 1 301 1.4E-94 T 12-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 JDM601_2682 94d4090267a0c1bb6f747cd430b9418f 303 SUPERFAMILY SSF55326 14 131 2.79E-30 T 12-10-2018 IPR036921 PurM-like, N-terminal domain superfamily JDM601_2682 94d4090267a0c1bb6f747cd430b9418f 303 Pfam PF02769 AIR synthase related protein, C-terminal domain 144 235 2.1E-5 T 12-10-2018 IPR010918 PurM-like, C-terminal domain JDM601_2682 94d4090267a0c1bb6f747cd430b9418f 303 Gene3D G3DSA:3.90.650.10 139 301 4.4E-42 T 12-10-2018 IPR036676 PurM-like, C-terminal domain superfamily JDM601_2682 94d4090267a0c1bb6f747cd430b9418f 303 TIGRFAM TIGR01379 thiL: thiamine-phosphate kinase 1 300 1.1E-83 T 12-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 JDM601_2682 94d4090267a0c1bb6f747cd430b9418f 303 Gene3D G3DSA:3.30.1330.10 1 132 8.6E-39 T 12-10-2018 IPR036921 PurM-like, N-terminal domain superfamily JDM601_2682 94d4090267a0c1bb6f747cd430b9418f 303 SUPERFAMILY SSF56042 137 289 2.09E-28 T 12-10-2018 IPR036676 PurM-like, C-terminal domain superfamily JDM601_2682 94d4090267a0c1bb6f747cd430b9418f 303 Pfam PF00586 AIR synthase related protein, N-terminal domain 21 131 2.9E-18 T 12-10-2018 IPR016188 PurM-like, N-terminal domain JDM601_0980 06fba2912d9d90bb1ce33ba3fbca85ee 326 Gene3D G3DSA:3.40.50.2020 15 310 1.8E-112 T 12-10-2018 JDM601_0980 06fba2912d9d90bb1ce33ba3fbca85ee 326 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 13 322 5.5E-121 T 12-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 JDM601_0980 06fba2912d9d90bb1ce33ba3fbca85ee 326 Hamap MF_00583_B Putative ribose-phosphate pyrophosphokinase [prs]. 12 323 45.607 T 12-10-2018 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type GO:0004749 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 JDM601_0980 06fba2912d9d90bb1ce33ba3fbca85ee 326 Pfam PF14572 Phosphoribosyl synthetase-associated domain 216 322 2.1E-21 T 12-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 JDM601_0980 06fba2912d9d90bb1ce33ba3fbca85ee 326 SUPERFAMILY SSF53271 77 314 1.07E-60 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like JDM601_0980 06fba2912d9d90bb1ce33ba3fbca85ee 326 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 12 128 1.9E-45 T 12-10-2018 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 JDM601_0980 06fba2912d9d90bb1ce33ba3fbca85ee 326 Gene3D G3DSA:3.40.50.2020 155 299 1.8E-112 T 12-10-2018 JDM601_0980 06fba2912d9d90bb1ce33ba3fbca85ee 326 SMART SM01400 12 128 3.0E-70 T 12-10-2018 JDM601_0980 06fba2912d9d90bb1ce33ba3fbca85ee 326 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 136 151 - T 12-10-2018 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 JDM601_3993 fcc68e458b9254bc25453b92af3212c7 604 Pfam PF08502 LeuA allosteric (dimerisation) domain 470 600 1.8E-30 T 12-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 JDM601_3993 fcc68e458b9254bc25453b92af3212c7 604 SMART SM00917 470 601 2.4E-35 T 12-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 JDM601_3993 fcc68e458b9254bc25453b92af3212c7 604 Gene3D G3DSA:1.10.1220.20 433 486 2.1E-25 T 12-10-2018 JDM601_3993 fcc68e458b9254bc25453b92af3212c7 604 Pfam PF00682 HMGL-like 71 351 1.0E-76 T 12-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 JDM601_3993 fcc68e458b9254bc25453b92af3212c7 604 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 78 94 - T 12-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 JDM601_3993 fcc68e458b9254bc25453b92af3212c7 604 SUPERFAMILY SSF89000 436 486 1.88E-15 T 12-10-2018 JDM601_3993 fcc68e458b9254bc25453b92af3212c7 604 SUPERFAMILY SSF110921 499 600 1.44E-34 T 12-10-2018 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 JDM601_3993 fcc68e458b9254bc25453b92af3212c7 604 Hamap MF_00572 2-isopropylmalate synthase [leuA]. 42 602 54.456 T 12-10-2018 IPR005668 2-isopropylmalate synthase GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 JDM601_3993 fcc68e458b9254bc25453b92af3212c7 604 TIGRFAM TIGR00970 leuA_yeast: 2-isopropylmalate synthase 41 602 3.8E-287 T 12-10-2018 IPR005668 2-isopropylmalate synthase GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 JDM601_3993 fcc68e458b9254bc25453b92af3212c7 604 Gene3D G3DSA:3.20.20.70 48 424 3.4E-161 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JDM601_3993 fcc68e458b9254bc25453b92af3212c7 604 Gene3D G3DSA:3.30.160.270 487 602 1.7E-42 T 12-10-2018 JDM601_3993 fcc68e458b9254bc25453b92af3212c7 604 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 281 294 - T 12-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 JDM601_3993 fcc68e458b9254bc25453b92af3212c7 604 SUPERFAMILY SSF51569 60 368 3.85E-94 T 12-10-2018 JDM601_2478 84082f66ef80917a2bbf464baaa8d15b 249 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 14 227 1.2E-48 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF JDM601_2478 84082f66ef80917a2bbf464baaa8d15b 249 SUPERFAMILY SSF53850 9 228 3.07E-54 T 12-10-2018 JDM601_2478 84082f66ef80917a2bbf464baaa8d15b 249 Gene3D G3DSA:3.40.190.10 14 229 2.0E-63 T 12-10-2018 JDM601_2478 84082f66ef80917a2bbf464baaa8d15b 249 SMART SM00062 13 237 1.6E-62 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF JDM601_2478 84082f66ef80917a2bbf464baaa8d15b 249 Gene3D G3DSA:3.40.190.10 100 199 2.0E-63 T 12-10-2018 JDM601_2370 afadb3f6aedefaf5801de24f8f08c622 793 Gene3D G3DSA:3.10.20.30 448 521 6.1E-32 T 12-10-2018 IPR012675 Beta-grasp domain superfamily JDM601_2370 afadb3f6aedefaf5801de24f8f08c622 793 SUPERFAMILY SSF81301 241 459 1.28E-60 T 12-10-2018 JDM601_2370 afadb3f6aedefaf5801de24f8f08c622 793 Gene3D G3DSA:1.10.3210.10 64 252 6.9E-77 T 12-10-2018 JDM601_2370 afadb3f6aedefaf5801de24f8f08c622 793 Gene3D G3DSA:3.30.460.10 254 386 1.6E-45 T 12-10-2018 JDM601_2370 afadb3f6aedefaf5801de24f8f08c622 793 Pfam PF13291 ACT domain 712 788 7.8E-17 T 12-10-2018 IPR002912 ACT domain JDM601_2370 afadb3f6aedefaf5801de24f8f08c622 793 Gene3D G3DSA:3.30.70.260 712 792 1.1E-16 T 12-10-2018 JDM601_2370 afadb3f6aedefaf5801de24f8f08c622 793 Pfam PF02824 TGS domain 455 514 3.9E-23 T 12-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 JDM601_2370 afadb3f6aedefaf5801de24f8f08c622 793 Pfam PF13328 HD domain 89 236 1.1E-46 T 12-10-2018 IPR003607 HD/PDEase domain JDM601_2370 afadb3f6aedefaf5801de24f8f08c622 793 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 89 788 1.2E-277 T 12-10-2018 IPR004811 RelA/SpoT family GO:0015969 JDM601_2370 afadb3f6aedefaf5801de24f8f08c622 793 Pfam PF04607 Region found in RelA / SpoT proteins 296 405 9.2E-37 T 12-10-2018 IPR007685 RelA/SpoT GO:0015969 JDM601_2370 afadb3f6aedefaf5801de24f8f08c622 793 SUPERFAMILY SSF109604 65 252 3.3E-70 T 12-10-2018 JDM601_2370 afadb3f6aedefaf5801de24f8f08c622 793 SMART SM00954 296 406 1.4E-60 T 12-10-2018 IPR007685 RelA/SpoT GO:0015969 JDM601_2370 afadb3f6aedefaf5801de24f8f08c622 793 SUPERFAMILY SSF55021 711 791 2.17E-14 T 12-10-2018 JDM601_2370 afadb3f6aedefaf5801de24f8f08c622 793 SMART SM00471 104 214 1.8E-12 T 12-10-2018 IPR003607 HD/PDEase domain JDM601_2370 afadb3f6aedefaf5801de24f8f08c622 793 SUPERFAMILY SSF81271 442 514 2.94E-22 T 12-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 JDM601_1008 ae2a9e3440656c8d2ecd48f1ba741daa 345 Gene3D G3DSA:2.130.10.10 10 90 3.3E-13 T 12-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 JDM601_1008 ae2a9e3440656c8d2ecd48f1ba741daa 345 TIGRFAM TIGR02276 beta_rpt_yvtn: 40-residue YVTN family beta-propeller repeat 35 74 5.2E-10 T 12-10-2018 IPR011964 YVTN beta-propeller repeat JDM601_1008 ae2a9e3440656c8d2ecd48f1ba741daa 345 SUPERFAMILY SSF50969 30 316 1.65E-29 T 12-10-2018 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like JDM601_1008 ae2a9e3440656c8d2ecd48f1ba741daa 345 Gene3D G3DSA:2.130.10.10 91 330 2.5E-28 T 12-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 JDM601_0389 bfa242dfd0f0ae0cd76aceb7cde538d7 234 Gene3D G3DSA:3.40.50.1110 2 232 6.0E-46 T 12-10-2018 IPR036514 SGNH hydrolase superfamily JDM601_0389 bfa242dfd0f0ae0cd76aceb7cde538d7 234 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 8 221 3.1E-18 T 12-10-2018 IPR013830 SGNH hydrolase-type esterase domain JDM601_0389 bfa242dfd0f0ae0cd76aceb7cde538d7 234 SUPERFAMILY SSF52266 3 230 2.66E-53 T 12-10-2018 JDM601_1332 8098b2d9698d5a55980711e70f52b679 700 SUPERFAMILY SSF52540 39 661 2.42E-20 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_1332 8098b2d9698d5a55980711e70f52b679 700 Gene3D G3DSA:3.40.50.300 508 693 4.5E-29 T 12-10-2018 JDM601_1332 8098b2d9698d5a55980711e70f52b679 700 SMART SM00487 20 284 9.5E-5 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain JDM601_1332 8098b2d9698d5a55980711e70f52b679 700 SMART SM00491 538 667 2.4E-44 T 12-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 JDM601_1332 8098b2d9698d5a55980711e70f52b679 700 Pfam PF13307 Helicase C-terminal domain 521 680 3.7E-26 T 12-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 JDM601_1332 8098b2d9698d5a55980711e70f52b679 700 Gene3D G3DSA:3.40.50.300 23 283 1.2E-44 T 12-10-2018 JDM601_2551 490419a873fa06f41ae341cb8e2c46ed 321 SUPERFAMILY SSF56300 8 265 3.65E-24 T 12-10-2018 JDM601_2551 490419a873fa06f41ae341cb8e2c46ed 321 Pfam PF00149 Calcineurin-like phosphoesterase 13 247 1.1E-13 T 12-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 JDM601_0001 4ea126bfa40bcbdeb77d7a322b479913 491 SUPERFAMILY SSF52540 151 363 1.0E-44 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_0001 4ea126bfa40bcbdeb77d7a322b479913 491 SUPERFAMILY SSF48295 383 487 9.68E-32 T 12-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 JDM601_0001 4ea126bfa40bcbdeb77d7a322b479913 491 SMART SM00760 396 464 5.4E-31 T 12-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 JDM601_0001 4ea126bfa40bcbdeb77d7a322b479913 491 Gene3D G3DSA:1.10.1750.10 391 491 1.8E-36 T 12-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 JDM601_0001 4ea126bfa40bcbdeb77d7a322b479913 491 ProSitePatterns PS01008 DnaA protein signature. 446 464 - T 12-10-2018 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 JDM601_0001 4ea126bfa40bcbdeb77d7a322b479913 491 Gene3D G3DSA:1.10.8.60 318 389 1.5E-25 T 12-10-2018 JDM601_0001 4ea126bfa40bcbdeb77d7a322b479913 491 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 400 464 1.1E-26 T 12-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 JDM601_0001 4ea126bfa40bcbdeb77d7a322b479913 491 SMART SM00382 184 312 1.2E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain JDM601_0001 4ea126bfa40bcbdeb77d7a322b479913 491 Gene3D G3DSA:3.40.50.300 138 316 5.8E-51 T 12-10-2018 JDM601_0001 4ea126bfa40bcbdeb77d7a322b479913 491 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 37 485 3.6E-150 T 12-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 JDM601_0001 4ea126bfa40bcbdeb77d7a322b479913 491 Pfam PF00308 Bacterial dnaA protein 152 369 4.5E-103 T 12-10-2018 IPR013317 Chromosomal replication initiator protein DnaA JDM601_0001 4ea126bfa40bcbdeb77d7a322b479913 491 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 217 231 1.1E-48 T 12-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like JDM601_0001 4ea126bfa40bcbdeb77d7a322b479913 491 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 445 464 1.1E-48 T 12-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like JDM601_0001 4ea126bfa40bcbdeb77d7a322b479913 491 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 283 310 1.1E-48 T 12-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like JDM601_0001 4ea126bfa40bcbdeb77d7a322b479913 491 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 185 205 1.1E-48 T 12-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like JDM601_0001 4ea126bfa40bcbdeb77d7a322b479913 491 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 249 263 1.1E-48 T 12-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like JDM601_0001 4ea126bfa40bcbdeb77d7a322b479913 491 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 10 486 32.325 T 12-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 JDM601_0731 3cb11dde2dd80801459399f221c2d8dc 308 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 167 278 5.0E-14 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 JDM601_0731 3cb11dde2dd80801459399f221c2d8dc 308 SUPERFAMILY SSF47203 164 282 5.64E-23 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 JDM601_0731 3cb11dde2dd80801459399f221c2d8dc 308 Gene3D G3DSA:1.20.140.10 160 286 1.6E-20 T 12-10-2018 JDM601_4205 269de3b2f3fb8be70092e4dc79d05170 408 Pfam PF00067 Cytochrome P450 129 376 1.3E-24 T 12-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_4205 269de3b2f3fb8be70092e4dc79d05170 408 PRINTS PR00385 P450 superfamily signature 282 293 1.1E-5 T 12-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_4205 269de3b2f3fb8be70092e4dc79d05170 408 PRINTS PR00385 P450 superfamily signature 247 264 1.1E-5 T 12-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_4205 269de3b2f3fb8be70092e4dc79d05170 408 PRINTS PR00385 P450 superfamily signature 348 357 1.1E-5 T 12-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_4205 269de3b2f3fb8be70092e4dc79d05170 408 PRINTS PR00385 P450 superfamily signature 357 368 1.1E-5 T 12-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_4205 269de3b2f3fb8be70092e4dc79d05170 408 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 350 359 - T 12-10-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 JDM601_4205 269de3b2f3fb8be70092e4dc79d05170 408 Gene3D G3DSA:1.10.630.10 1 408 5.4E-129 T 12-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_4205 269de3b2f3fb8be70092e4dc79d05170 408 PRINTS PR00359 B-class P450 signature 327 342 1.1E-50 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_4205 269de3b2f3fb8be70092e4dc79d05170 408 PRINTS PR00359 B-class P450 signature 299 326 1.1E-50 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_4205 269de3b2f3fb8be70092e4dc79d05170 408 PRINTS PR00359 B-class P450 signature 357 368 1.1E-50 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_4205 269de3b2f3fb8be70092e4dc79d05170 408 PRINTS PR00359 B-class P450 signature 96 107 1.1E-50 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_4205 269de3b2f3fb8be70092e4dc79d05170 408 PRINTS PR00359 B-class P450 signature 201 223 1.1E-50 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_4205 269de3b2f3fb8be70092e4dc79d05170 408 PRINTS PR00359 B-class P450 signature 159 174 1.1E-50 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_4205 269de3b2f3fb8be70092e4dc79d05170 408 PRINTS PR00359 B-class P450 signature 348 357 1.1E-50 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_4205 269de3b2f3fb8be70092e4dc79d05170 408 PRINTS PR00359 B-class P450 signature 142 158 1.1E-50 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_4205 269de3b2f3fb8be70092e4dc79d05170 408 PRINTS PR00359 B-class P450 signature 282 293 1.1E-50 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_4205 269de3b2f3fb8be70092e4dc79d05170 408 SUPERFAMILY SSF48264 11 408 4.45E-89 T 12-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_3523 3a644c150d2e4906d242e91e22914cec 466 SUPERFAMILY SSF55961 170 455 4.08E-36 T 12-10-2018 JDM601_3523 3a644c150d2e4906d242e91e22914cec 466 Gene3D G3DSA:2.102.10.10 40 172 1.7E-52 T 12-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 JDM601_3523 3a644c150d2e4906d242e91e22914cec 466 Gene3D G3DSA:3.90.380.10 22 291 1.7E-52 T 12-10-2018 JDM601_3523 3a644c150d2e4906d242e91e22914cec 466 SUPERFAMILY SSF50022 15 168 1.96E-39 T 12-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 JDM601_3523 3a644c150d2e4906d242e91e22914cec 466 Pfam PF00355 Rieske [2Fe-2S] domain 43 135 5.8E-12 T 12-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 JDM601_3523 3a644c150d2e4906d242e91e22914cec 466 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 188 453 8.1E-24 T 12-10-2018 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0044237|GO:0051537|GO:0055114 JDM601_1847 9ca02685eb244eefc8d6a5258bf87c03 426 Pfam PF00579 tRNA synthetases class I (W and Y) 31 325 6.9E-84 T 12-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 JDM601_1847 9ca02685eb244eefc8d6a5258bf87c03 426 SUPERFAMILY SSF55174 328 419 1.14E-17 T 12-10-2018 JDM601_1847 9ca02685eb244eefc8d6a5258bf87c03 426 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 45 67 3.3E-29 T 12-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 JDM601_1847 9ca02685eb244eefc8d6a5258bf87c03 426 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 184 206 3.3E-29 T 12-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 JDM601_1847 9ca02685eb244eefc8d6a5258bf87c03 426 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 217 229 3.3E-29 T 12-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 JDM601_1847 9ca02685eb244eefc8d6a5258bf87c03 426 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 163 178 3.3E-29 T 12-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 JDM601_1847 9ca02685eb244eefc8d6a5258bf87c03 426 Gene3D G3DSA:1.10.240.10 224 328 8.7E-35 T 12-10-2018 JDM601_1847 9ca02685eb244eefc8d6a5258bf87c03 426 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 41 51 - T 12-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 JDM601_1847 9ca02685eb244eefc8d6a5258bf87c03 426 Hamap MF_02006 Tyrosine--tRNA ligase [tyrS]. 3 422 42.949 T 12-10-2018 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 GO:0004831 KEGG: 00970+6.1.1.1 JDM601_1847 9ca02685eb244eefc8d6a5258bf87c03 426 SUPERFAMILY SSF52374 5 325 8.91E-94 T 12-10-2018 JDM601_1847 9ca02685eb244eefc8d6a5258bf87c03 426 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 2 420 3.1E-108 T 12-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 JDM601_1847 9ca02685eb244eefc8d6a5258bf87c03 426 Gene3D G3DSA:3.40.50.620 2 223 3.3E-83 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JDM601_1847 9ca02685eb244eefc8d6a5258bf87c03 426 Pfam PF01479 S4 domain 359 401 1.6E-5 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JDM601_1847 9ca02685eb244eefc8d6a5258bf87c03 426 SMART SM00363 357 418 9.4E-7 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JDM601_1847 9ca02685eb244eefc8d6a5258bf87c03 426 Gene3D G3DSA:3.10.290.10 329 425 3.5E-31 T 12-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 JDM601_3162 3d699831376096f71c96e13a8508b30b 270 Gene3D G3DSA:3.30.413.10 80 160 1.2E-18 T 12-10-2018 JDM601_3162 3d699831376096f71c96e13a8508b30b 270 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 9 56 1.0E-7 T 12-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 JDM601_3162 3d699831376096f71c96e13a8508b30b 270 Gene3D G3DSA:3.90.480.10 12 79 1.2E-18 T 12-10-2018 JDM601_3162 3d699831376096f71c96e13a8508b30b 270 SUPERFAMILY SSF55124 2 76 1.16E-13 T 12-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 JDM601_3162 3d699831376096f71c96e13a8508b30b 270 SUPERFAMILY SSF55124 171 266 3.92E-6 T 12-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 JDM601_3875 846365adb93a79eaf0eec95f925b5ea7 162 Gene3D G3DSA:1.20.58.1290 61 162 4.1E-40 T 12-10-2018 JDM601_3875 846365adb93a79eaf0eec95f925b5ea7 162 Gene3D G3DSA:2.30.30.840 1 60 3.1E-27 T 12-10-2018 JDM601_3875 846365adb93a79eaf0eec95f925b5ea7 162 SMART SM01058 2 112 1.2E-34 T 12-10-2018 IPR003711 CarD-like/TRCF domain JDM601_3875 846365adb93a79eaf0eec95f925b5ea7 162 SUPERFAMILY SSF141259 3 66 2.62E-15 T 12-10-2018 IPR036101 CarD-like/TRCF domain superfamily JDM601_3875 846365adb93a79eaf0eec95f925b5ea7 162 Pfam PF02559 CarD-like/TRCF domain 3 111 5.9E-20 T 12-10-2018 IPR003711 CarD-like/TRCF domain JDM601_2508 3ab00f0031603be5b35ac054f3764dda 409 Pfam PF06224 Winged helix DNA-binding domain 37 384 2.1E-75 T 12-10-2018 IPR009351 Protein of unknown function DUF1006 JDM601_0412 d2803f2ec48a4da56ceb2b60c72120b6 484 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 256 263 - T 12-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 JDM601_0412 d2803f2ec48a4da56ceb2b60c72120b6 484 SUPERFAMILY SSF53720 13 483 9.29E-165 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 JDM601_0412 d2803f2ec48a4da56ceb2b60c72120b6 484 Pfam PF00171 Aldehyde dehydrogenase family 17 480 1.9E-172 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 JDM601_0412 d2803f2ec48a4da56ceb2b60c72120b6 484 Gene3D G3DSA:3.40.309.10 260 449 2.6E-181 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 JDM601_0412 d2803f2ec48a4da56ceb2b60c72120b6 484 Gene3D G3DSA:3.40.605.10 17 478 2.6E-181 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 JDM601_0800 4e24da46e3679536d358c6d7295541d6 336 Gene3D G3DSA:3.40.30.130 2 161 8.8E-58 T 12-10-2018 JDM601_0800 4e24da46e3679536d358c6d7295541d6 336 Pfam PF13410 Glutathione S-transferase, C-terminal domain 188 256 1.6E-11 T 12-10-2018 JDM601_0800 4e24da46e3679536d358c6d7295541d6 336 SUPERFAMILY SSF47616 159 325 3.48E-34 T 12-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily JDM601_0800 4e24da46e3679536d358c6d7295541d6 336 PIRSF PIRSF015753 1 307 3.4E-109 T 12-10-2018 IPR016639 Glutathione S-transferase Omega/GSH GO:0004364 JDM601_0800 4e24da46e3679536d358c6d7295541d6 336 Gene3D G3DSA:1.20.1050.10 162 336 1.0E-75 T 12-10-2018 JDM601_0800 4e24da46e3679536d358c6d7295541d6 336 Pfam PF13409 Glutathione S-transferase, N-terminal domain 46 140 1.1E-11 T 12-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 JDM601_0800 4e24da46e3679536d358c6d7295541d6 336 SUPERFAMILY SSF52833 23 95 1.68E-6 T 12-10-2018 IPR036249 Thioredoxin-like superfamily JDM601_4161 127cdc1f9b5ad6d75beca14e7a2741a9 132 Gene3D G3DSA:1.10.260.40 1 132 7.3E-45 T 12-10-2018 JDM601_4161 127cdc1f9b5ad6d75beca14e7a2741a9 132 SUPERFAMILY SSF47413 35 77 6.93E-5 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 JDM601_4037 c8ee128ae3cd44fe6f5000976b4ed1b7 109 Pfam PF06305 Lipopolysaccharide assembly protein A domain 53 103 4.5E-13 T 12-10-2018 IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 JDM601_0842 6c1df8febf00bc4a7f3d25ab6ca1d267 89 SUPERFAMILY SSF47413 5 70 1.35E-13 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 JDM601_0842 6c1df8febf00bc4a7f3d25ab6ca1d267 89 SMART SM00530 13 68 2.9E-9 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 JDM601_0842 6c1df8febf00bc4a7f3d25ab6ca1d267 89 Pfam PF13560 Helix-turn-helix domain 9 65 8.0E-11 T 12-10-2018 JDM601_0842 6c1df8febf00bc4a7f3d25ab6ca1d267 89 Gene3D G3DSA:1.10.260.40 3 77 7.1E-18 T 12-10-2018 JDM601_2583 6040aa20eab9d2df2bf6573289daf1f3 187 SUPERFAMILY SSF53474 3 116 6.99E-12 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_2583 6040aa20eab9d2df2bf6573289daf1f3 187 Gene3D G3DSA:3.40.50.1820 3 173 9.0E-10 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_0417 2c6ea8dde3065d2b230e81e59fee63f7 190 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 54 1.6E-9 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_0417 2c6ea8dde3065d2b230e81e59fee63f7 190 Gene3D G3DSA:1.10.357.10 5 184 4.1E-23 T 12-10-2018 JDM601_0417 2c6ea8dde3065d2b230e81e59fee63f7 190 SUPERFAMILY SSF46689 6 62 1.55E-11 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JDM601_3344 88b2e965f3e8be4774fc8c51e972fe2a 417 PRINTS PR00359 B-class P450 signature 335 350 2.3E-45 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3344 88b2e965f3e8be4774fc8c51e972fe2a 417 PRINTS PR00359 B-class P450 signature 356 365 2.3E-45 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3344 88b2e965f3e8be4774fc8c51e972fe2a 417 PRINTS PR00359 B-class P450 signature 101 112 2.3E-45 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3344 88b2e965f3e8be4774fc8c51e972fe2a 417 PRINTS PR00359 B-class P450 signature 148 164 2.3E-45 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3344 88b2e965f3e8be4774fc8c51e972fe2a 417 PRINTS PR00359 B-class P450 signature 165 180 2.3E-45 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3344 88b2e965f3e8be4774fc8c51e972fe2a 417 PRINTS PR00359 B-class P450 signature 209 231 2.3E-45 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3344 88b2e965f3e8be4774fc8c51e972fe2a 417 PRINTS PR00359 B-class P450 signature 290 301 2.3E-45 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3344 88b2e965f3e8be4774fc8c51e972fe2a 417 PRINTS PR00359 B-class P450 signature 307 334 2.3E-45 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3344 88b2e965f3e8be4774fc8c51e972fe2a 417 PRINTS PR00359 B-class P450 signature 365 376 2.3E-45 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3344 88b2e965f3e8be4774fc8c51e972fe2a 417 SUPERFAMILY SSF48264 23 416 4.32E-89 T 12-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_3344 88b2e965f3e8be4774fc8c51e972fe2a 417 Gene3D G3DSA:1.10.630.10 3 417 3.1E-128 T 12-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_3344 88b2e965f3e8be4774fc8c51e972fe2a 417 Pfam PF00067 Cytochrome P450 218 387 3.3E-22 T 12-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_3344 88b2e965f3e8be4774fc8c51e972fe2a 417 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 358 367 - T 12-10-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 JDM601_2896 53610fec6f2914841fdfd0bd4182f341 378 TIGRFAM TIGR00996 Mtu_fam_mce: virulence factor Mce family protein 13 305 8.0E-44 T 12-10-2018 IPR005693 Virulence factor Mce protein JDM601_2896 53610fec6f2914841fdfd0bd4182f341 378 Pfam PF02470 MlaD protein 40 114 9.9E-13 T 12-10-2018 IPR003399 Mce/MlaD JDM601_3142 36276919d1de71deb61cf29d1b402fbf 135 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 17 106 1.6E-10 T 12-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain JDM601_3142 36276919d1de71deb61cf29d1b402fbf 135 SUPERFAMILY SSF53927 11 133 2.3E-37 T 12-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 JDM601_3142 36276919d1de71deb61cf29d1b402fbf 135 Gene3D G3DSA:3.40.140.10 7 135 1.4E-47 T 12-10-2018 JDM601_2552 747e8537fe90156d785d3b243b531abd 196 Pfam PF12079 Protein of unknown function (DUF3558) 43 167 3.8E-9 T 12-10-2018 IPR024520 Protein of unknown function DUF3558 JDM601_1021 bfaf6534c47e79b8189c7b5b8252c8ab 288 Gene3D G3DSA:3.40.50.1110 81 275 1.9E-20 T 12-10-2018 IPR036514 SGNH hydrolase superfamily JDM601_1021 bfaf6534c47e79b8189c7b5b8252c8ab 288 SUPERFAMILY SSF52266 80 274 8.25E-27 T 12-10-2018 JDM601_1021 bfaf6534c47e79b8189c7b5b8252c8ab 288 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 84 263 1.2E-19 T 12-10-2018 IPR013830 SGNH hydrolase-type esterase domain JDM601_4237 7b6a83966252f9f9ffc2178a7f4abe08 260 Pfam PF08924 Domain of unknown function (DUF1906) 54 181 9.0E-26 T 12-10-2018 IPR015020 Protein of unknown function DUF1906 JDM601_4237 7b6a83966252f9f9ffc2178a7f4abe08 260 Gene3D G3DSA:3.20.20.80 35 257 1.3E-57 T 12-10-2018 JDM601_4237 7b6a83966252f9f9ffc2178a7f4abe08 260 SUPERFAMILY SSF51445 57 193 1.07E-7 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily JDM601_0501 5c39fde3b1ddc431c17771228cae6505 302 Pfam PF12710 haloacid dehalogenase-like hydrolase 52 238 5.1E-28 T 12-10-2018 JDM601_0501 5c39fde3b1ddc431c17771228cae6505 302 Gene3D G3DSA:1.20.1440.100 63 139 1.0E-62 T 12-10-2018 JDM601_0501 5c39fde3b1ddc431c17771228cae6505 302 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 51 251 3.6E-58 T 12-10-2018 IPR006385 HAD-superfamily hydrolase, subfamily IB, SerB1-like JDM601_0501 5c39fde3b1ddc431c17771228cae6505 302 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 51 241 3.1E-17 T 12-10-2018 JDM601_0501 5c39fde3b1ddc431c17771228cae6505 302 SUPERFAMILY SSF56784 51 269 2.13E-30 T 12-10-2018 IPR036412 HAD-like superfamily JDM601_0501 5c39fde3b1ddc431c17771228cae6505 302 Gene3D G3DSA:3.40.50.1000 52 264 1.0E-62 T 12-10-2018 IPR023214 HAD superfamily JDM601_1122 9573c6f4b6e30e2f4cdbd2c8d5994489 361 Gene3D G3DSA:3.30.1540.10 215 303 9.6E-126 T 12-10-2018 JDM601_1122 9573c6f4b6e30e2f4cdbd2c8d5994489 361 Gene3D G3DSA:3.40.50.10540 4 321 9.6E-126 T 12-10-2018 IPR023606 CoA-transferase family III domain superfamily JDM601_1122 9573c6f4b6e30e2f4cdbd2c8d5994489 361 SUPERFAMILY SSF89796 3 359 1.05E-110 T 12-10-2018 IPR023606 CoA-transferase family III domain superfamily JDM601_1122 9573c6f4b6e30e2f4cdbd2c8d5994489 361 Pfam PF02515 CoA-transferase family III 5 352 1.3E-78 T 12-10-2018 IPR003673 CoA-transferase family III GO:0003824 JDM601_0796 b4d55ea6bccbd854d46c1f2d98a10613 92 Gene3D G3DSA:3.10.20.30 11 92 1.0E-20 T 12-10-2018 IPR012675 Beta-grasp domain superfamily JDM601_0796 b4d55ea6bccbd854d46c1f2d98a10613 92 SUPERFAMILY SSF54285 12 90 1.25E-14 T 12-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp JDM601_0796 b4d55ea6bccbd854d46c1f2d98a10613 92 Pfam PF02597 ThiS family 15 92 9.4E-11 T 12-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 JDM601_1044 5eb65094decea0f6504b6fcecfd3c823 278 Pfam PF01522 Polysaccharide deacetylase 34 149 2.6E-33 T 12-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 JDM601_1044 5eb65094decea0f6504b6fcecfd3c823 278 Gene3D G3DSA:3.20.20.370 23 222 3.2E-60 T 12-10-2018 JDM601_1044 5eb65094decea0f6504b6fcecfd3c823 278 SUPERFAMILY SSF88713 34 218 6.45E-58 T 12-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 JDM601_0292 98038eb1bbedad7779040a36fbf20737 1326 Gene3D G3DSA:3.40.50.300 787 1055 9.9E-52 T 12-10-2018 JDM601_0292 98038eb1bbedad7779040a36fbf20737 1326 SUPERFAMILY SSF52540 834 1011 3.08E-13 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_0292 98038eb1bbedad7779040a36fbf20737 1326 Gene3D G3DSA:3.40.50.300 428 786 1.7E-78 T 12-10-2018 JDM601_0292 98038eb1bbedad7779040a36fbf20737 1326 SUPERFAMILY SSF52540 1094 1268 6.82E-7 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_0292 98038eb1bbedad7779040a36fbf20737 1326 TIGRFAM TIGR03925 T7SS_EccC_b: type VII secretion protein EccCb 765 1315 2.1E-161 T 12-10-2018 IPR023837 EccCb-like, Actinobacteria JDM601_0292 98038eb1bbedad7779040a36fbf20737 1326 SMART SM00382 833 1005 0.29 T 12-10-2018 IPR003593 AAA+ ATPase domain JDM601_0292 98038eb1bbedad7779040a36fbf20737 1326 SMART SM00382 1105 1274 0.27 T 12-10-2018 IPR003593 AAA+ ATPase domain JDM601_0292 98038eb1bbedad7779040a36fbf20737 1326 SMART SM00382 483 669 1.1 T 12-10-2018 IPR003593 AAA+ ATPase domain JDM601_0292 98038eb1bbedad7779040a36fbf20737 1326 TIGRFAM TIGR03924 T7SS_EccC_a: type VII secretion protein EccCa 24 717 1.8E-224 T 12-10-2018 IPR023836 EccCa-like, Actinobacteria JDM601_0292 98038eb1bbedad7779040a36fbf20737 1326 Gene3D G3DSA:3.40.50.300 1082 1317 2.1E-26 T 12-10-2018 JDM601_0292 98038eb1bbedad7779040a36fbf20737 1326 Pfam PF01580 FtsK/SpoIIIE family 804 1047 1.7E-63 T 12-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 JDM601_0292 98038eb1bbedad7779040a36fbf20737 1326 Pfam PF01580 FtsK/SpoIIIE family 452 581 6.5E-17 T 12-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 JDM601_0292 98038eb1bbedad7779040a36fbf20737 1326 Gene3D G3DSA:3.40.50.300 165 369 1.1E-5 T 12-10-2018 JDM601_0292 98038eb1bbedad7779040a36fbf20737 1326 SUPERFAMILY SSF52540 446 715 8.89E-26 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_3909 342e2233d4b7635c445f5c9481872f4a 458 TIGRFAM TIGR00666 PBP4: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 97 230 3.2E-34 T 12-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 JDM601_3909 342e2233d4b7635c445f5c9481872f4a 458 TIGRFAM TIGR00666 PBP4: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 229 436 6.2E-59 T 12-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 JDM601_3909 342e2233d4b7635c445f5c9481872f4a 458 Pfam PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family 236 450 4.0E-63 T 12-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 JDM601_3909 342e2233d4b7635c445f5c9481872f4a 458 Pfam PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family 72 235 6.0E-43 T 12-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 JDM601_3909 342e2233d4b7635c445f5c9481872f4a 458 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 345 359 1.5E-20 T 12-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 JDM601_3909 342e2233d4b7635c445f5c9481872f4a 458 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 330 344 1.5E-20 T 12-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 JDM601_3909 342e2233d4b7635c445f5c9481872f4a 458 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 110 129 1.5E-20 T 12-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 JDM601_3909 342e2233d4b7635c445f5c9481872f4a 458 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 273 295 1.5E-20 T 12-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 JDM601_3909 342e2233d4b7635c445f5c9481872f4a 458 Gene3D G3DSA:3.40.710.10 233 451 5.7E-55 T 12-10-2018 JDM601_3909 342e2233d4b7635c445f5c9481872f4a 458 Gene3D G3DSA:3.40.710.10 62 162 1.6E-8 T 12-10-2018 JDM601_3909 342e2233d4b7635c445f5c9481872f4a 458 SUPERFAMILY SSF56601 82 453 5.63E-57 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like JDM601_2169 c381a3a182cb66221f7547c4329688b2 428 Gene3D G3DSA:3.40.50.1100 64 163 3.2E-103 T 12-10-2018 JDM601_2169 c381a3a182cb66221f7547c4329688b2 428 Gene3D G3DSA:3.40.1020.10 336 428 4.5E-9 T 12-10-2018 IPR038110 Threonine dehydratase, ACT-like domain superfamily KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 JDM601_2169 c381a3a182cb66221f7547c4329688b2 428 SUPERFAMILY SSF53686 19 371 5.11E-89 T 12-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme JDM601_2169 c381a3a182cb66221f7547c4329688b2 428 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 335 427 8.8E-27 T 12-10-2018 IPR001721 Threonine dehydratase, ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 JDM601_2169 c381a3a182cb66221f7547c4329688b2 428 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 56 69 - T 12-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 JDM601_2169 c381a3a182cb66221f7547c4329688b2 428 TIGRFAM TIGR02079 THD1: threonine dehydratase 20 428 4.3E-188 T 12-10-2018 IPR011820 L-threonine dehydratase biosynthetic IlvA GO:0004794 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 JDM601_2169 c381a3a182cb66221f7547c4329688b2 428 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 29 322 6.6E-72 T 12-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme JDM601_2169 c381a3a182cb66221f7547c4329688b2 428 Gene3D G3DSA:3.40.50.1100 29 333 3.2E-103 T 12-10-2018 JDM601_1202 a4deccf647fb097dc4955e57a5a93364 418 SUPERFAMILY SSF50346 3 75 4.0E-6 T 12-10-2018 IPR011033 PRC-barrel-like superfamily JDM601_1202 a4deccf647fb097dc4955e57a5a93364 418 Pfam PF00571 CBS domain 274 336 0.0011 T 12-10-2018 IPR000644 CBS domain JDM601_1202 a4deccf647fb097dc4955e57a5a93364 418 Pfam PF00571 CBS domain 343 397 0.0054 T 12-10-2018 IPR000644 CBS domain JDM601_1202 a4deccf647fb097dc4955e57a5a93364 418 Gene3D G3DSA:3.10.580.10 270 398 2.1E-24 T 12-10-2018 JDM601_1202 a4deccf647fb097dc4955e57a5a93364 418 Pfam PF03448 MgtE intracellular N domain 171 271 7.1E-24 T 12-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain JDM601_1202 a4deccf647fb097dc4955e57a5a93364 418 Gene3D G3DSA:1.25.60.10 154 268 1.4E-23 T 12-10-2018 IPR038076 MgtE, N-terminal domain superfamily JDM601_1202 a4deccf647fb097dc4955e57a5a93364 418 SMART SM00924 170 273 8.9E-32 T 12-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain JDM601_1202 a4deccf647fb097dc4955e57a5a93364 418 SUPERFAMILY SSF158791 157 268 8.37E-29 T 12-10-2018 JDM601_1202 a4deccf647fb097dc4955e57a5a93364 418 SUPERFAMILY SSF54631 272 403 3.92E-22 T 12-10-2018 JDM601_2253 3372f06a4c2bcc38cc45f7d259516999 397 SUPERFAMILY SSF101960 34 391 4.58E-85 T 12-10-2018 IPR037284 SUF system FeS cluster assembly, SufBD superfamily JDM601_2253 3372f06a4c2bcc38cc45f7d259516999 397 Pfam PF01458 Uncharacterized protein family (UPF0051) 141 366 3.1E-64 T 12-10-2018 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 JDM601_2253 3372f06a4c2bcc38cc45f7d259516999 397 TIGRFAM TIGR01981 sufD: FeS assembly protein SufD 105 383 3.5E-76 T 12-10-2018 IPR011542 SUF system FeS cluster assembly, SufD GO:0016226 JDM601_3012 147db75325e6f6faa71d28abe1964990 179 Gene3D G3DSA:3.90.79.10 5 177 9.7E-30 T 12-10-2018 JDM601_3012 147db75325e6f6faa71d28abe1964990 179 SUPERFAMILY SSF55811 24 162 3.93E-20 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 JDM601_3012 147db75325e6f6faa71d28abe1964990 179 Pfam PF00293 NUDIX domain 47 166 1.1E-8 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 JDM601_4112 530d5516627ceb817875f1c293e650f9 400 SUPERFAMILY SSF53474 63 149 1.15E-6 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_4112 530d5516627ceb817875f1c293e650f9 400 Gene3D G3DSA:3.40.50.1820 62 222 6.3E-7 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_4112 530d5516627ceb817875f1c293e650f9 400 Pfam PF08237 PE-PPE domain 80 288 8.8E-48 T 12-10-2018 IPR013228 PE-PPE, C-terminal JDM601_1621 d6db242fb775b54124013d7a2096b759 278 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 8 194 0.0037 T 12-10-2018 JDM601_1621 d6db242fb775b54124013d7a2096b759 278 Gene3D G3DSA:3.40.50.720 1 260 1.1E-51 T 12-10-2018 JDM601_1621 d6db242fb775b54124013d7a2096b759 278 Pfam PF00106 short chain dehydrogenase 8 195 4.8E-46 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_1621 d6db242fb775b54124013d7a2096b759 278 SUPERFAMILY SSF51735 3 267 3.38E-54 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_1621 d6db242fb775b54124013d7a2096b759 278 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 4.0E-21 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_1621 d6db242fb775b54124013d7a2096b759 278 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 4.0E-21 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_1621 d6db242fb775b54124013d7a2096b759 278 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 4.0E-21 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_1621 d6db242fb775b54124013d7a2096b759 278 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 4.0E-21 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_1621 d6db242fb775b54124013d7a2096b759 278 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 145 173 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 JDM601_1621 d6db242fb775b54124013d7a2096b759 278 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 4.9E-12 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_1621 d6db242fb775b54124013d7a2096b759 278 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 4.9E-12 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_1621 d6db242fb775b54124013d7a2096b759 278 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 4.9E-12 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0152 24e32512f78a7652c378a07e851db145 256 ProDom PD120223 SCO3432 GENE ML2604 GP79 GP77 CGL2230 MB0190 8 254 1.0E-88 T 12-10-2018 JDM601_0152 24e32512f78a7652c378a07e851db145 256 Pfam PF10979 Protein of unknown function (DUF2786) 12 50 3.4E-12 T 12-10-2018 IPR024498 Domain of unknown function DUF2786 JDM601_2236 e3ccd2b876f1974f59e164231f6371ec 217 SUPERFAMILY SSF54001 84 203 1.37E-32 T 12-10-2018 IPR038765 Papain-like cysteine peptidase superfamily JDM601_2236 e3ccd2b876f1974f59e164231f6371ec 217 Pfam PF00877 NlpC/P60 family 100 214 2.0E-29 T 12-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain JDM601_2236 e3ccd2b876f1974f59e164231f6371ec 217 Gene3D G3DSA:3.90.1720.10 14 217 9.8E-61 T 12-10-2018 JDM601_2599 7c809983e8b316dbd9ff2f254de746f1 185 Gene3D G3DSA:1.10.132.20 1 32 2.2E-5 T 12-10-2018 JDM601_2599 7c809983e8b316dbd9ff2f254de746f1 185 Pfam PF01765 Ribosome recycling factor 21 183 1.4E-59 T 12-10-2018 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 JDM601_2599 7c809983e8b316dbd9ff2f254de746f1 185 Gene3D G3DSA:1.10.132.20 101 185 8.6E-27 T 12-10-2018 JDM601_2599 7c809983e8b316dbd9ff2f254de746f1 185 Gene3D G3DSA:3.30.1360.40 33 100 1.7E-29 T 12-10-2018 JDM601_2599 7c809983e8b316dbd9ff2f254de746f1 185 Hamap MF_00040 Ribosome-recycling factor [frr]. 3 185 26.206 T 12-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 JDM601_2599 7c809983e8b316dbd9ff2f254de746f1 185 TIGRFAM TIGR00496 frr: ribosome recycling factor 10 185 3.0E-65 T 12-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 JDM601_2599 7c809983e8b316dbd9ff2f254de746f1 185 SUPERFAMILY SSF55194 3 184 7.98E-67 T 12-10-2018 IPR036191 RRF superfamily Reactome: R-HSA-5419276 JDM601_2018 63f37d7b3ee6b7a79bc73e1fab69f813 286 SUPERFAMILY SSF46689 211 263 4.93E-10 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JDM601_2018 63f37d7b3ee6b7a79bc73e1fab69f813 286 SMART SM00342 175 258 1.0E-14 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 JDM601_2018 63f37d7b3ee6b7a79bc73e1fab69f813 286 Gene3D G3DSA:1.10.10.60 164 262 5.0E-22 T 12-10-2018 JDM601_2018 63f37d7b3ee6b7a79bc73e1fab69f813 286 Pfam PF12833 Helix-turn-helix domain 183 260 1.3E-18 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 JDM601_1918 0445b2022523c90c201cddf262e35ea9 309 Pfam PF05949 Bacterial protein of unknown function (DUF881) 148 303 2.7E-36 T 12-10-2018 IPR010273 Protein of unknown function DUF881 JDM601_1918 0445b2022523c90c201cddf262e35ea9 309 Gene3D G3DSA:3.30.70.1880 146 308 2.2E-28 T 12-10-2018 JDM601_2303 286cfdef74278495da24eb664bea9494 204 Pfam PF00440 Bacterial regulatory proteins, tetR family 21 66 1.1E-8 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_2303 286cfdef74278495da24eb664bea9494 204 Gene3D G3DSA:1.10.357.10 5 201 9.7E-27 T 12-10-2018 JDM601_2303 286cfdef74278495da24eb664bea9494 204 SUPERFAMILY SSF46689 9 81 4.93E-15 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JDM601_2303 286cfdef74278495da24eb664bea9494 204 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 21 34 6.3E-5 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_2303 286cfdef74278495da24eb664bea9494 204 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 42 65 6.3E-5 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_0245 b85820c3f6ef8ea9e5c5e2fe02593da9 468 Pfam PF07690 Major Facilitator Superfamily 38 368 6.9E-19 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 JDM601_0245 b85820c3f6ef8ea9e5c5e2fe02593da9 468 Gene3D G3DSA:1.20.1250.20 1 213 9.3E-52 T 12-10-2018 JDM601_0245 b85820c3f6ef8ea9e5c5e2fe02593da9 468 SUPERFAMILY SSF103473 22 450 3.4E-35 T 12-10-2018 IPR036259 MFS transporter superfamily JDM601_0245 b85820c3f6ef8ea9e5c5e2fe02593da9 468 Gene3D G3DSA:1.20.1250.20 217 455 5.5E-59 T 12-10-2018 JDM601_3510 94e4326ab90451516f689e216a92c777 217 Pfam PF00440 Bacterial regulatory proteins, tetR family 34 79 6.9E-7 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_3510 94e4326ab90451516f689e216a92c777 217 Gene3D G3DSA:1.10.357.10 74 216 7.3E-15 T 12-10-2018 JDM601_3510 94e4326ab90451516f689e216a92c777 217 Gene3D G3DSA:1.10.10.60 6 73 2.4E-8 T 12-10-2018 JDM601_3510 94e4326ab90451516f689e216a92c777 217 SUPERFAMILY SSF46689 23 105 4.0E-14 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JDM601_3510 94e4326ab90451516f689e216a92c777 217 SUPERFAMILY SSF48498 100 214 3.5E-6 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily JDM601_1251 b1fb81762f8ea785a1f1aa40c9dcaaed 126 SMART SM00347 5 108 9.0E-13 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 JDM601_1251 b1fb81762f8ea785a1f1aa40c9dcaaed 126 Pfam PF12802 MarR family 12 71 1.6E-11 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 JDM601_1251 b1fb81762f8ea785a1f1aa40c9dcaaed 126 Gene3D G3DSA:1.10.10.10 1 125 5.7E-28 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JDM601_1251 b1fb81762f8ea785a1f1aa40c9dcaaed 126 SUPERFAMILY SSF46785 5 122 7.18E-22 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JDM601_3933 b762c04b4b41c05091c31e42d7a9509f 67 PIRSF PIRSF002599 1 67 6.1E-25 T 12-10-2018 IPR012156 Cold shock, CspA GO:0003676 JDM601_3933 b762c04b4b41c05091c31e42d7a9509f 67 PRINTS PR00050 Cold shock protein signature 40 58 3.1E-16 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 JDM601_3933 b762c04b4b41c05091c31e42d7a9509f 67 PRINTS PR00050 Cold shock protein signature 4 19 3.1E-16 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 JDM601_3933 b762c04b4b41c05091c31e42d7a9509f 67 PRINTS PR00050 Cold shock protein signature 25 34 3.1E-16 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 JDM601_3933 b762c04b4b41c05091c31e42d7a9509f 67 SMART SM00357 3 67 2.0E-30 T 12-10-2018 IPR011129 Cold shock domain GO:0003676 JDM601_3933 b762c04b4b41c05091c31e42d7a9509f 67 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 12-10-2018 IPR019844 Cold-shock conserved site JDM601_3933 b762c04b4b41c05091c31e42d7a9509f 67 Gene3D G3DSA:2.40.50.140 1 66 1.3E-30 T 12-10-2018 JDM601_3933 b762c04b4b41c05091c31e42d7a9509f 67 Pfam PF00313 'Cold-shock' DNA-binding domain 3 66 1.9E-31 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 JDM601_3933 b762c04b4b41c05091c31e42d7a9509f 67 SUPERFAMILY SSF50249 1 66 1.35E-25 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold JDM601_1172 ba6cfaeaef1b7ad6c3a5c3b5a2b2c93a 466 Gene3D G3DSA:3.40.50.12780 4 367 2.8E-101 T 12-10-2018 JDM601_1172 ba6cfaeaef1b7ad6c3a5c3b5a2b2c93a 466 Pfam PF13193 AMP-binding enzyme C-terminal domain 383 458 9.9E-23 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain JDM601_1172 ba6cfaeaef1b7ad6c3a5c3b5a2b2c93a 466 Pfam PF00501 AMP-binding enzyme 30 368 1.2E-66 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 JDM601_1172 ba6cfaeaef1b7ad6c3a5c3b5a2b2c93a 466 ProSitePatterns PS00455 Putative AMP-binding domain signature. 131 142 - T 12-10-2018 IPR020845 AMP-binding, conserved site JDM601_1172 ba6cfaeaef1b7ad6c3a5c3b5a2b2c93a 466 SUPERFAMILY SSF56801 16 465 4.32E-115 T 12-10-2018 JDM601_1172 ba6cfaeaef1b7ad6c3a5c3b5a2b2c93a 466 Gene3D G3DSA:3.30.300.30 368 466 4.0E-31 T 12-10-2018 JDM601_0743 06200a99888832489dd085b739344f6a 168 Pfam PF07681 DoxX 7 92 8.2E-19 T 12-10-2018 IPR032808 DoxX family JDM601_0032 8a6d6ed5993cee29b132a66bfad8783c 252 Gene3D G3DSA:3.40.50.720 1 251 1.6E-71 T 12-10-2018 JDM601_0032 8a6d6ed5993cee29b132a66bfad8783c 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 198 218 3.7E-36 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0032 8a6d6ed5993cee29b132a66bfad8783c 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 116 132 3.7E-36 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0032 8a6d6ed5993cee29b132a66bfad8783c 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 1 16 3.7E-36 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0032 8a6d6ed5993cee29b132a66bfad8783c 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 142 161 3.7E-36 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0032 8a6d6ed5993cee29b132a66bfad8783c 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 163 180 3.7E-36 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0032 8a6d6ed5993cee29b132a66bfad8783c 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 71 82 3.7E-36 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0032 8a6d6ed5993cee29b132a66bfad8783c 252 SUPERFAMILY SSF51735 1 236 1.46E-72 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_0032 8a6d6ed5993cee29b132a66bfad8783c 252 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 6 235 8.6E-60 T 12-10-2018 JDM601_0032 8a6d6ed5993cee29b132a66bfad8783c 252 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 1 173 0.0051 T 12-10-2018 JDM601_0032 8a6d6ed5993cee29b132a66bfad8783c 252 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 129 157 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 JDM601_3096 17d6661f43743032543547a2ad8077fa 111 PIRSF PIRSF010611 1 111 2.1E-38 T 12-10-2018 IPR016572 Uncharacterised conserved protein UCP010611 JDM601_3096 17d6661f43743032543547a2ad8077fa 111 TIGRFAM TIGR04529 MTB_hemophore: hemophore-related protein, Rv0203/Rv1174c family 40 111 4.6E-19 T 12-10-2018 IPR032407 Haemophore, haem-binding GO:0020037 JDM601_1561 5b7414faba7a74b4694b8ba2f30b9542 112 TIGRFAM TIGR04529 MTB_hemophore: hemophore-related protein, Rv0203/Rv1174c family 41 112 1.8E-22 T 12-10-2018 IPR032407 Haemophore, haem-binding GO:0020037 JDM601_1561 5b7414faba7a74b4694b8ba2f30b9542 112 PIRSF PIRSF010611 1 112 1.1E-44 T 12-10-2018 IPR016572 Uncharacterised conserved protein UCP010611 JDM601_1929 272d881823a4ae2b39b3979de9ce29b3 748 Gene3D G3DSA:2.170.170.11 140 274 9.6E-289 T 12-10-2018 IPR023310 Malate synthase G, beta sub-domain GO:0004474 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 JDM601_1929 272d881823a4ae2b39b3979de9ce29b3 748 Gene3D G3DSA:3.20.20.360 15 604 9.6E-289 T 12-10-2018 JDM601_1929 272d881823a4ae2b39b3979de9ce29b3 748 TIGRFAM TIGR01345 malate_syn_G: malate synthase G 9 745 0.0 T 12-10-2018 IPR006253 Malate synthase G GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 JDM601_1929 272d881823a4ae2b39b3979de9ce29b3 748 SUPERFAMILY SSF51645 7 745 1.31E-294 T 12-10-2018 IPR011076 Malate synthase-like superfamily GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 JDM601_1929 272d881823a4ae2b39b3979de9ce29b3 748 Hamap MF_00641 Malate synthase G [glcB]. 1 748 400.897 T 12-10-2018 IPR006253 Malate synthase G GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 JDM601_1929 272d881823a4ae2b39b3979de9ce29b3 748 Pfam PF01274 Malate synthase 22 720 3.2E-180 T 12-10-2018 IPR001465 Malate synthase GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 JDM601_1929 272d881823a4ae2b39b3979de9ce29b3 748 Gene3D G3DSA:1.20.1220.12 606 748 5.9E-75 T 12-10-2018 JDM601_3964 c74a5da57f2d601c46e7498cff5e77bd 209 Gene3D G3DSA:2.40.10.10 32 204 2.0E-25 T 12-10-2018 JDM601_3964 c74a5da57f2d601c46e7498cff5e77bd 209 Gene3D G3DSA:2.40.10.10 105 195 2.0E-25 T 12-10-2018 JDM601_3964 c74a5da57f2d601c46e7498cff5e77bd 209 SUPERFAMILY SSF50494 32 191 2.36E-17 T 12-10-2018 IPR009003 Peptidase S1, PA clan JDM601_0968 db18d75e3dd007a24b7fd8365fe36523 490 Pfam PF08237 PE-PPE domain 92 324 1.7E-69 T 12-10-2018 IPR013228 PE-PPE, C-terminal JDM601_3629 483a0f3d404ba8c04c971abd6bcb758b 345 TIGRFAM TIGR00996 Mtu_fam_mce: virulence factor Mce family protein 10 289 1.0E-75 T 12-10-2018 IPR005693 Virulence factor Mce protein JDM601_3629 483a0f3d404ba8c04c971abd6bcb758b 345 Pfam PF11887 Cholesterol uptake porter CUP1 of Mce4, putative 145 289 1.9E-8 T 12-10-2018 IPR024516 Mammalian cell entry, C-terminal JDM601_3629 483a0f3d404ba8c04c971abd6bcb758b 345 Pfam PF02470 MlaD protein 37 111 3.1E-15 T 12-10-2018 IPR003399 Mce/MlaD JDM601_3458 a67c12c82c2c3ca213732f384b6c167b 388 SUPERFAMILY SSF51905 89 203 7.66E-26 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_3458 a67c12c82c2c3ca213732f384b6c167b 388 Pfam PF01494 FAD binding domain 34 167 2.0E-37 T 12-10-2018 IPR002938 FAD-binding domain GO:0071949 JDM601_3458 a67c12c82c2c3ca213732f384b6c167b 388 Gene3D G3DSA:3.30.70.2450 10 91 2.8E-44 T 12-10-2018 JDM601_3458 a67c12c82c2c3ca213732f384b6c167b 388 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 117 133 2.3E-20 T 12-10-2018 JDM601_3458 a67c12c82c2c3ca213732f384b6c167b 388 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 102 117 2.3E-20 T 12-10-2018 JDM601_3458 a67c12c82c2c3ca213732f384b6c167b 388 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 153 169 2.3E-20 T 12-10-2018 JDM601_3458 a67c12c82c2c3ca213732f384b6c167b 388 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 135 153 2.3E-20 T 12-10-2018 JDM601_3458 a67c12c82c2c3ca213732f384b6c167b 388 Gene3D G3DSA:3.50.50.60 2 165 2.8E-44 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_3309 f003657f6310270131a119692e66339e 138 Pfam PF01343 Peptidase family S49 4 69 6.6E-17 T 12-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 JDM601_3309 f003657f6310270131a119692e66339e 138 Gene3D G3DSA:3.90.226.10 26 67 5.2E-22 T 12-10-2018 JDM601_3309 f003657f6310270131a119692e66339e 138 SUPERFAMILY SSF52096 7 55 5.45E-8 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily JDM601_3309 f003657f6310270131a119692e66339e 138 Gene3D G3DSA:3.40.1750.10 4 25 5.2E-22 T 12-10-2018 JDM601_4232 181a6edcfab90177c8983977807cb8ad 277 SUPERFAMILY SSF51735 10 227 2.36E-45 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_4232 181a6edcfab90177c8983977807cb8ad 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 133 149 2.5E-6 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_4232 181a6edcfab90177c8983977807cb8ad 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 13 30 2.5E-6 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_4232 181a6edcfab90177c8983977807cb8ad 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 85 96 2.5E-6 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_4232 181a6edcfab90177c8983977807cb8ad 277 Pfam PF00106 short chain dehydrogenase 13 199 1.1E-31 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_4232 181a6edcfab90177c8983977807cb8ad 277 Gene3D G3DSA:3.40.50.720 7 236 4.3E-45 T 12-10-2018 JDM601_0525 37e7c037ccd9b7650f5f76e4ad7de664 259 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 22 236 8.1E-40 T 12-10-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 JDM601_0250 dd2c9c4777ae6834ab1d207210145670 315 Gene3D G3DSA:3.40.50.1980 172 315 3.4E-29 T 12-10-2018 JDM601_0250 dd2c9c4777ae6834ab1d207210145670 315 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 5 25 0.0013 T 12-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal JDM601_0250 dd2c9c4777ae6834ab1d207210145670 315 Gene3D G3DSA:3.40.50.1980 38 171 2.5E-44 T 12-10-2018 JDM601_0250 dd2c9c4777ae6834ab1d207210145670 315 SUPERFAMILY SSF53807 39 272 1.3E-38 T 12-10-2018 JDM601_0250 dd2c9c4777ae6834ab1d207210145670 315 Pfam PF01497 Periplasmic binding protein 58 259 1.0E-23 T 12-10-2018 IPR002491 ABC transporter periplasmic binding domain JDM601_2482 876dfd2ba3f02cf0fc347145a2941252 178 Gene3D G3DSA:1.10.10.10 70 115 3.9E-13 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JDM601_2482 876dfd2ba3f02cf0fc347145a2941252 178 Gene3D G3DSA:1.10.10.2800 8 69 3.6E-6 T 12-10-2018 JDM601_2482 876dfd2ba3f02cf0fc347145a2941252 178 Hamap MF_01114 Regulatory protein RecX [recX]. 12 172 15.216 T 12-10-2018 IPR003783 Regulatory protein RecX GO:0006282 JDM601_2482 876dfd2ba3f02cf0fc347145a2941252 178 Pfam PF02631 RecX family 46 166 1.6E-27 T 12-10-2018 IPR003783 Regulatory protein RecX GO:0006282 JDM601_4249 519693c873bf9fe91c5134f41f0edd82 389 PIRSF PIRSF016578 1 386 5.2E-135 T 12-10-2018 JDM601_4249 519693c873bf9fe91c5134f41f0edd82 389 SUPERFAMILY SSF56645 4 201 1.02E-26 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 JDM601_4249 519693c873bf9fe91c5134f41f0edd82 389 Gene3D G3DSA:2.40.110.10 104 203 4.9E-35 T 12-10-2018 JDM601_4249 519693c873bf9fe91c5134f41f0edd82 389 Gene3D G3DSA:1.20.140.10 204 389 8.5E-52 T 12-10-2018 JDM601_4249 519693c873bf9fe91c5134f41f0edd82 389 SUPERFAMILY SSF47203 223 360 4.35E-20 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 JDM601_4249 519693c873bf9fe91c5134f41f0edd82 389 Pfam PF08028 Acyl-CoA dehydrogenase, C-terminal domain 233 364 1.5E-43 T 12-10-2018 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain JDM601_4249 519693c873bf9fe91c5134f41f0edd82 389 Gene3D G3DSA:1.10.540.10 1 103 6.8E-25 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 JDM601_0149 81f852a16ff4bbf649ad77b0d341b7bc 374 SMART SM00829 10 367 6.9E-6 T 12-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 JDM601_0149 81f852a16ff4bbf649ad77b0d341b7bc 374 Pfam PF00107 Zinc-binding dehydrogenase 196 316 4.3E-19 T 12-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 JDM601_0149 81f852a16ff4bbf649ad77b0d341b7bc 374 Gene3D G3DSA:3.40.50.720 173 312 1.8E-108 T 12-10-2018 JDM601_0149 81f852a16ff4bbf649ad77b0d341b7bc 374 Gene3D G3DSA:3.90.180.10 8 366 1.8E-108 T 12-10-2018 JDM601_0149 81f852a16ff4bbf649ad77b0d341b7bc 374 SUPERFAMILY SSF51735 158 333 2.39E-33 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_0149 81f852a16ff4bbf649ad77b0d341b7bc 374 SUPERFAMILY SSF50129 322 369 6.12E-9 T 12-10-2018 IPR011032 GroES-like superfamily JDM601_0149 81f852a16ff4bbf649ad77b0d341b7bc 374 TIGRFAM TIGR03989 Rxyl_3153: NDMA-dependent alcohol dehydrogenase, Rxyl_3153 family 2 369 1.7E-167 T 12-10-2018 IPR023921 Alcohol dehydrogenase, zinc-type, actinomycetes KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396 JDM601_0149 81f852a16ff4bbf649ad77b0d341b7bc 374 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 60 74 - T 12-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 JDM601_0149 81f852a16ff4bbf649ad77b0d341b7bc 374 SUPERFAMILY SSF50129 1 192 1.52E-55 T 12-10-2018 IPR011032 GroES-like superfamily JDM601_0149 81f852a16ff4bbf649ad77b0d341b7bc 374 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 154 5.3E-26 T 12-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 JDM601_2064 9c697ac16089f92f8469f1eab61cd6ff 259 Pfam PF16859 Bacterial transcriptional repressor C-terminal 88 204 1.0E-8 T 12-10-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal JDM601_2064 9c697ac16089f92f8469f1eab61cd6ff 259 SUPERFAMILY SSF48498 91 210 1.33E-10 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily JDM601_2064 9c697ac16089f92f8469f1eab61cd6ff 259 Pfam PF00440 Bacterial regulatory proteins, tetR family 29 74 4.4E-11 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_2064 9c697ac16089f92f8469f1eab61cd6ff 259 Gene3D G3DSA:1.10.10.60 17 67 7.9E-13 T 12-10-2018 JDM601_2064 9c697ac16089f92f8469f1eab61cd6ff 259 SUPERFAMILY SSF46689 19 83 4.49E-14 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JDM601_2064 9c697ac16089f92f8469f1eab61cd6ff 259 Gene3D G3DSA:1.10.357.10 69 216 1.0E-20 T 12-10-2018 JDM601_2064 9c697ac16089f92f8469f1eab61cd6ff 259 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 50 73 9.4E-7 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_2064 9c697ac16089f92f8469f1eab61cd6ff 259 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 29 42 9.4E-7 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_2023 5743b3a89420c72924429974e0f944ba 337 Gene3D G3DSA:3.90.180.10 20 332 8.2E-128 T 12-10-2018 JDM601_2023 5743b3a89420c72924429974e0f944ba 337 Pfam PF00107 Zinc-binding dehydrogenase 160 283 9.8E-22 T 12-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 JDM601_2023 5743b3a89420c72924429974e0f944ba 337 SMART SM00829 19 333 1.4E-7 T 12-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 JDM601_2023 5743b3a89420c72924429974e0f944ba 337 Pfam PF16884 N-terminal domain of oxidoreductase 6 108 4.1E-38 T 12-10-2018 JDM601_2023 5743b3a89420c72924429974e0f944ba 337 SUPERFAMILY SSF51735 126 293 1.28E-48 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_2023 5743b3a89420c72924429974e0f944ba 337 SUPERFAMILY SSF50129 4 145 8.62E-35 T 12-10-2018 IPR011032 GroES-like superfamily JDM601_2023 5743b3a89420c72924429974e0f944ba 337 Gene3D G3DSA:3.40.50.720 128 304 8.2E-128 T 12-10-2018 JDM601_3145 e3b7f626a95d1f72958a66609126083f 575 PIRSF PIRSF000171 1 570 2.7E-44 T 12-10-2018 JDM601_3145 e3b7f626a95d1f72958a66609126083f 575 TIGRFAM TIGR01816 sdhA_forward: succinate dehydrogenase, flavoprotein subunit 1 575 6.1E-296 T 12-10-2018 IPR011281 Succinate dehydrogenase, flavoprotein subunit GO:0006099|GO:0016627|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 JDM601_3145 e3b7f626a95d1f72958a66609126083f 575 Pfam PF02910 Fumarate reductase flavoprotein C-term 447 575 1.4E-43 T 12-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 JDM601_3145 e3b7f626a95d1f72958a66609126083f 575 Gene3D G3DSA:3.50.50.60 1 403 3.9E-158 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_3145 e3b7f626a95d1f72958a66609126083f 575 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 1 575 1.2E-257 T 12-10-2018 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 JDM601_3145 e3b7f626a95d1f72958a66609126083f 575 Gene3D G3DSA:4.10.80.40 534 571 4.8E-7 T 12-10-2018 JDM601_3145 e3b7f626a95d1f72958a66609126083f 575 Pfam PF00890 FAD binding domain 1 392 1.1E-109 T 12-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 JDM601_3145 e3b7f626a95d1f72958a66609126083f 575 Gene3D G3DSA:3.90.700.10 238 341 3.9E-158 T 12-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 JDM601_3145 e3b7f626a95d1f72958a66609126083f 575 SUPERFAMILY SSF46977 438 575 1.19E-47 T 12-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 JDM601_3145 e3b7f626a95d1f72958a66609126083f 575 SUPERFAMILY SSF56425 228 346 1.94E-42 T 12-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 JDM601_3145 e3b7f626a95d1f72958a66609126083f 575 Gene3D G3DSA:1.20.58.100 420 533 2.1E-35 T 12-10-2018 JDM601_3145 e3b7f626a95d1f72958a66609126083f 575 SUPERFAMILY SSF51905 1 421 3.81E-69 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_3145 e3b7f626a95d1f72958a66609126083f 575 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 32 41 - T 12-10-2018 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 JDM601_3985 995c49cecfa7dc442b4ecd9e8c0e79d6 217 Gene3D G3DSA:3.40.1000.70 28 213 6.0E-19 T 12-10-2018 IPR038232 PknH-like extracellular domain superfamily KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1 JDM601_3985 995c49cecfa7dc442b4ecd9e8c0e79d6 217 Pfam PF14032 PknH-like extracellular domain 32 212 1.5E-37 T 12-10-2018 IPR026954 PknH-like extracellular domain KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1 JDM601_2969 dd14a6f4370a00dd8f7e043c56a49376 464 Pfam PF06974 Protein of unknown function (DUF1298) 317 459 2.0E-16 T 12-10-2018 IPR009721 O-acyltransferase WSD1, C-terminal GO:0004144 KEGG: 00073+2.3.1.20|KEGG: 00561+2.3.1.20 JDM601_2969 dd14a6f4370a00dd8f7e043c56a49376 464 SUPERFAMILY SSF52777 5 158 2.33E-6 T 12-10-2018 JDM601_2969 dd14a6f4370a00dd8f7e043c56a49376 464 Pfam PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain 5 265 5.8E-74 T 12-10-2018 IPR004255 O-acyltransferase, WSD1, N-terminal GO:0004144|GO:0045017 KEGG: 00073+2.3.1.20|KEGG: 00561+2.3.1.20 JDM601_2969 dd14a6f4370a00dd8f7e043c56a49376 464 TIGRFAM TIGR02946 acyl_WS_DGAT: acyltransferase, WS/DGAT/MGAT 5 463 8.6E-138 T 12-10-2018 IPR014292 Acyltransferase, WS/DGAT/MGAT GO:0016746|GO:0045017 KEGG: 00073+2.3.1.20|KEGG: 00561+2.3.1.20 JDM601_0917 47f52854ad1e3651ce4e9074ba627c4a 175 Pfam PF01899 Na+/H+ ion antiporter subunit 13 159 2.1E-33 T 12-10-2018 IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 JDM601_3701 de0f50369fc88d8db0f86e6959d72f5d 859 SUPERFAMILY SSF46894 792 858 3.4E-17 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 JDM601_3701 de0f50369fc88d8db0f86e6959d72f5d 859 Gene3D G3DSA:1.10.10.10 795 859 2.7E-19 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JDM601_3701 de0f50369fc88d8db0f86e6959d72f5d 859 Gene3D G3DSA:3.40.50.300 1 119 2.6E-10 T 12-10-2018 JDM601_3701 de0f50369fc88d8db0f86e6959d72f5d 859 SUPERFAMILY SSF52540 1 232 3.06E-15 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_3701 de0f50369fc88d8db0f86e6959d72f5d 859 SUPERFAMILY SSF48452 417 589 3.03E-6 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JDM601_3701 de0f50369fc88d8db0f86e6959d72f5d 859 Pfam PF00196 Bacterial regulatory proteins, luxR family 800 855 4.7E-15 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JDM601_3701 de0f50369fc88d8db0f86e6959d72f5d 859 Gene3D G3DSA:1.25.40.10 623 793 5.6E-6 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JDM601_3701 de0f50369fc88d8db0f86e6959d72f5d 859 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 831 843 2.0E-9 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JDM601_3701 de0f50369fc88d8db0f86e6959d72f5d 859 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 801 815 2.0E-9 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JDM601_3701 de0f50369fc88d8db0f86e6959d72f5d 859 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 815 831 2.0E-9 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JDM601_3701 de0f50369fc88d8db0f86e6959d72f5d 859 SMART SM00421 798 855 1.9E-20 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JDM601_3701 de0f50369fc88d8db0f86e6959d72f5d 859 Gene3D G3DSA:1.25.40.10 402 607 4.9E-9 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JDM601_1449 76d115dc4b130af8cdf38a2a3cd4b263 312 PIRSF PIRSF037505 8 225 2.3E-9 T 12-10-2018 IPR017226 Betaine-homocysteine S-methyltransferase, BHMT GO:0005737|GO:0008270|GO:0009086|GO:0047150 Reactome: R-HSA-1614635 JDM601_1449 76d115dc4b130af8cdf38a2a3cd4b263 312 PIRSF PIRSF037505 242 308 0.12 T 12-10-2018 IPR017226 Betaine-homocysteine S-methyltransferase, BHMT GO:0005737|GO:0008270|GO:0009086|GO:0047150 Reactome: R-HSA-1614635 JDM601_1449 76d115dc4b130af8cdf38a2a3cd4b263 312 Pfam PF02574 Homocysteine S-methyltransferase 14 296 4.3E-72 T 12-10-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 JDM601_1449 76d115dc4b130af8cdf38a2a3cd4b263 312 Gene3D G3DSA:3.20.20.330 6 296 5.6E-96 T 12-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 JDM601_1449 76d115dc4b130af8cdf38a2a3cd4b263 312 SUPERFAMILY SSF82282 10 300 4.05E-79 T 12-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 JDM601_3363 5932aa68f58d778aa943065a4f28de89 387 PRINTS PR00359 B-class P450 signature 339 350 4.5E-41 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3363 5932aa68f58d778aa943065a4f28de89 387 PRINTS PR00359 B-class P450 signature 181 203 4.5E-41 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3363 5932aa68f58d778aa943065a4f28de89 387 PRINTS PR00359 B-class P450 signature 136 151 4.5E-41 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3363 5932aa68f58d778aa943065a4f28de89 387 PRINTS PR00359 B-class P450 signature 69 80 4.5E-41 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3363 5932aa68f58d778aa943065a4f28de89 387 PRINTS PR00359 B-class P450 signature 330 339 4.5E-41 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3363 5932aa68f58d778aa943065a4f28de89 387 PRINTS PR00359 B-class P450 signature 280 307 4.5E-41 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3363 5932aa68f58d778aa943065a4f28de89 387 PRINTS PR00359 B-class P450 signature 263 274 4.5E-41 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3363 5932aa68f58d778aa943065a4f28de89 387 PRINTS PR00359 B-class P450 signature 308 323 4.5E-41 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3363 5932aa68f58d778aa943065a4f28de89 387 PRINTS PR00359 B-class P450 signature 119 135 4.5E-41 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3363 5932aa68f58d778aa943065a4f28de89 387 Pfam PF00067 Cytochrome P450 193 359 7.1E-18 T 12-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_3363 5932aa68f58d778aa943065a4f28de89 387 SUPERFAMILY SSF48264 21 386 3.01E-77 T 12-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_3363 5932aa68f58d778aa943065a4f28de89 387 Gene3D G3DSA:1.10.630.10 1 387 4.9E-117 T 12-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_1864 3c9449d184ea75b1a7b5abcd78adccd6 230 Hamap MF_00238 Cytidylate kinase [cmk]. 7 226 33.602 T 12-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 JDM601_1864 3c9449d184ea75b1a7b5abcd78adccd6 230 Gene3D G3DSA:3.40.50.300 4 230 9.3E-86 T 12-10-2018 JDM601_1864 3c9449d184ea75b1a7b5abcd78adccd6 230 TIGRFAM TIGR00017 cmk: cytidylate kinase 7 217 9.7E-70 T 12-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 JDM601_1864 3c9449d184ea75b1a7b5abcd78adccd6 230 SUPERFAMILY SSF52540 8 225 4.71E-43 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_1864 3c9449d184ea75b1a7b5abcd78adccd6 230 Pfam PF02224 Cytidylate kinase 9 223 1.0E-77 T 12-10-2018 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 JDM601_0355 b78e8cd381d0bf8501853de3dd820d9f 372 Gene3D G3DSA:1.50.10.20 5 369 1.7E-74 T 12-10-2018 JDM601_0355 b78e8cd381d0bf8501853de3dd820d9f 372 SUPERFAMILY SSF48208 44 304 1.12E-22 T 12-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 JDM601_0355 b78e8cd381d0bf8501853de3dd820d9f 372 Pfam PF03663 Glycosyl hydrolase family 76 12 304 1.6E-27 T 12-10-2018 IPR005198 Glycoside hydrolase, family 76 JDM601_0355 b78e8cd381d0bf8501853de3dd820d9f 372 PIRSF PIRSF021505 1 369 6.2E-75 T 12-10-2018 IPR014512 Predicted O-glycosyl hydrolase JDM601_3487 12f666c95f7bd0038c8a161d1cd33e37 380 Pfam PF04909 Amidohydrolase 20 366 1.8E-27 T 12-10-2018 IPR006680 Amidohydrolase-related GO:0016787 JDM601_3487 12f666c95f7bd0038c8a161d1cd33e37 380 Gene3D G3DSA:3.20.20.140 12 364 1.0E-57 T 12-10-2018 JDM601_3487 12f666c95f7bd0038c8a161d1cd33e37 380 SUPERFAMILY SSF51556 18 366 1.79E-52 T 12-10-2018 IPR032466 Metal-dependent hydrolase JDM601_3675 643ade83d5a18c9e22a0f8b2cff369a8 309 SUPERFAMILY SSF51679 16 291 1.31E-51 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 JDM601_3675 643ade83d5a18c9e22a0f8b2cff369a8 309 TIGRFAM TIGR03619 F420_Rv2161c: probable F420-dependent oxidoreductase, Rv2161c family 26 283 1.3E-63 T 12-10-2018 IPR019921 Luciferase-like, F420-dependent oxidoreductase, Rv2161c, predicted JDM601_3675 643ade83d5a18c9e22a0f8b2cff369a8 309 Gene3D G3DSA:3.20.20.30 4 308 1.2E-68 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 JDM601_3675 643ade83d5a18c9e22a0f8b2cff369a8 309 Pfam PF00296 Luciferase-like monooxygenase 19 252 2.8E-41 T 12-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 JDM601_3906 da442b8d60707c99db58a0638421001f 199 SUPERFAMILY SSF53271 10 197 2.23E-50 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like JDM601_3906 da442b8d60707c99db58a0638421001f 199 Gene3D G3DSA:3.40.50.2020 1 198 5.5E-65 T 12-10-2018 JDM601_3906 da442b8d60707c99db58a0638421001f 199 Pfam PF00156 Phosphoribosyl transferase domain 24 179 2.3E-18 T 12-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 JDM601_3906 da442b8d60707c99db58a0638421001f 199 TIGRFAM TIGR01203 HGPRTase: hypoxanthine phosphoribosyltransferase 18 192 1.5E-63 T 12-10-2018 IPR005904 Hypoxanthine phosphoribosyl transferase GO:0004422|GO:0005737|GO:0006166 KEGG: 00230+2.4.2.8|KEGG: 00983+2.4.2.8|MetaCyc: PWY-6599|MetaCyc: PWY-6609|MetaCyc: PWY-6610|MetaCyc: PWY-6620 JDM601_3603 ec628de8bcbac3f3c2e9adac77a00ea5 276 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 86 97 6.0E-22 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3603 ec628de8bcbac3f3c2e9adac77a00ea5 276 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 12 29 6.0E-22 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3603 ec628de8bcbac3f3c2e9adac77a00ea5 276 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 6.0E-22 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3603 ec628de8bcbac3f3c2e9adac77a00ea5 276 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 133 149 6.0E-22 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3603 ec628de8bcbac3f3c2e9adac77a00ea5 276 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 6.0E-22 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3603 ec628de8bcbac3f3c2e9adac77a00ea5 276 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 219 239 6.0E-22 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3603 ec628de8bcbac3f3c2e9adac77a00ea5 276 Gene3D G3DSA:3.40.50.720 9 261 4.2E-60 T 12-10-2018 JDM601_3603 ec628de8bcbac3f3c2e9adac77a00ea5 276 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 146 174 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 JDM601_3603 ec628de8bcbac3f3c2e9adac77a00ea5 276 SUPERFAMILY SSF51735 10 241 3.81E-58 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_3603 ec628de8bcbac3f3c2e9adac77a00ea5 276 Pfam PF00106 short chain dehydrogenase 13 203 1.1E-46 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0336 721344c29a35236f4735554a0e89d968 493 Pfam PF00324 Amino acid permease 31 439 1.4E-98 T 12-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 JDM601_0336 721344c29a35236f4735554a0e89d968 493 PIRSF PIRSF006060 11 483 1.9E-55 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 JDM601_0336 721344c29a35236f4735554a0e89d968 493 ProSitePatterns PS00218 Amino acid permeases signature. 55 85 - T 12-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 JDM601_0336 721344c29a35236f4735554a0e89d968 493 Gene3D G3DSA:1.20.1740.10 22 476 4.3E-55 T 12-10-2018 JDM601_3241 bd4911ca02aa4a94ae2942eb30cdd3ff 151 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 12 139 2.9E-21 T 12-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 JDM601_3241 bd4911ca02aa4a94ae2942eb30cdd3ff 151 SUPERFAMILY SSF52540 22 134 1.68E-14 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_3241 bd4911ca02aa4a94ae2942eb30cdd3ff 151 Gene3D G3DSA:3.40.50.300 2 150 1.3E-32 T 12-10-2018 JDM601_3241 bd4911ca02aa4a94ae2942eb30cdd3ff 151 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 8 137 1.6E-30 T 12-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 JDM601_3293 61d08204dc9783d5c373ecfa356a79ed 291 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 4 159 1.5E-48 T 12-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 JDM601_3293 61d08204dc9783d5c373ecfa356a79ed 291 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 162 288 5.9E-36 T 12-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 JDM601_3293 61d08204dc9783d5c373ecfa356a79ed 291 SUPERFAMILY SSF51735 3 160 9.78E-44 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_3293 61d08204dc9783d5c373ecfa356a79ed 291 TIGRFAM TIGR01692 HIBADH: 3-hydroxyisobutyrate dehydrogenase 6 289 4.3E-108 T 12-10-2018 IPR011548 3-hydroxyisobutyrate dehydrogenase GO:0008442|GO:0051287|GO:0055114 KEGG: 00280+1.1.1.31|Reactome: R-HSA-70895 JDM601_3293 61d08204dc9783d5c373ecfa356a79ed 291 SUPERFAMILY SSF48179 161 289 5.21E-37 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 JDM601_3293 61d08204dc9783d5c373ecfa356a79ed 291 Gene3D G3DSA:3.40.50.720 1 160 7.4E-51 T 12-10-2018 JDM601_3293 61d08204dc9783d5c373ecfa356a79ed 291 PIRSF PIRSF000103 1 291 2.4E-82 T 12-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 JDM601_3293 61d08204dc9783d5c373ecfa356a79ed 291 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 6 19 - T 12-10-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 JDM601_3293 61d08204dc9783d5c373ecfa356a79ed 291 Gene3D G3DSA:1.10.1040.10 162 291 2.0E-41 T 12-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 JDM601_2254 733c079b19b6b32b0d73859ba19efb7c 481 SUPERFAMILY SSF101960 47 478 3.01E-139 T 12-10-2018 IPR037284 SUF system FeS cluster assembly, SufBD superfamily JDM601_2254 733c079b19b6b32b0d73859ba19efb7c 481 Pfam PF01458 Uncharacterized protein family (UPF0051) 227 452 9.6E-75 T 12-10-2018 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 JDM601_2254 733c079b19b6b32b0d73859ba19efb7c 481 TIGRFAM TIGR01980 sufB: FeS assembly protein SufB 25 472 9.9E-219 T 12-10-2018 IPR010231 SUF system FeS cluster assembly, SufB GO:0016226 JDM601_3972 4200c65be55e47b1dcdaa2a85b64dc59 439 Pfam PF01882 Protein of unknown function DUF58 186 280 3.0E-18 T 12-10-2018 IPR002881 Domain of unknown function DUF58 JDM601_0789 a424a936385b9dcdbea7f644665c9d9e 550 Gene3D G3DSA:3.40.50.300 355 545 1.6E-43 T 12-10-2018 JDM601_0789 a424a936385b9dcdbea7f644665c9d9e 550 Gene3D G3DSA:3.40.50.300 173 354 1.1E-36 T 12-10-2018 JDM601_0789 a424a936385b9dcdbea7f644665c9d9e 550 Pfam PF13625 Helicase conserved C-terminal domain 7 135 8.8E-46 T 12-10-2018 IPR032830 Helicase XPB/Ssl2, N-terminal domain Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167246|Reactome: R-HSA-427413|Reactome: R-HSA-5696395|Reactome: R-HSA-5696400|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-72086|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73863|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-77075 JDM601_0789 a424a936385b9dcdbea7f644665c9d9e 550 Pfam PF16203 ERCC3/RAD25/XPB C-terminal helicase 354 538 1.1E-42 T 12-10-2018 IPR032438 ERCC3/RAD25/XPB helicase, C-terminal domain Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167246|Reactome: R-HSA-427413|Reactome: R-HSA-5696395|Reactome: R-HSA-5696400|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-72086|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73863|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-77075 JDM601_0789 a424a936385b9dcdbea7f644665c9d9e 550 SUPERFAMILY SSF52540 291 511 5.48E-28 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_0789 a424a936385b9dcdbea7f644665c9d9e 550 Pfam PF04851 Type III restriction enzyme, res subunit 182 328 3.3E-13 T 12-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 JDM601_0789 a424a936385b9dcdbea7f644665c9d9e 550 SUPERFAMILY SSF52540 142 346 2.02E-32 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_0789 a424a936385b9dcdbea7f644665c9d9e 550 SMART SM00490 421 501 1.6E-10 T 12-10-2018 IPR001650 Helicase, C-terminal JDM601_0789 a424a936385b9dcdbea7f644665c9d9e 550 PRINTS PR00851 Xeroderma pigmentosum group B protein signature 292 312 5.1E-35 T 12-10-2018 JDM601_0789 a424a936385b9dcdbea7f644665c9d9e 550 PRINTS PR00851 Xeroderma pigmentosum group B protein signature 357 379 5.1E-35 T 12-10-2018 JDM601_0789 a424a936385b9dcdbea7f644665c9d9e 550 PRINTS PR00851 Xeroderma pigmentosum group B protein signature 476 501 5.1E-35 T 12-10-2018 JDM601_0789 a424a936385b9dcdbea7f644665c9d9e 550 PRINTS PR00851 Xeroderma pigmentosum group B protein signature 457 475 5.1E-35 T 12-10-2018 JDM601_0789 a424a936385b9dcdbea7f644665c9d9e 550 PRINTS PR00851 Xeroderma pigmentosum group B protein signature 192 214 5.1E-35 T 12-10-2018 JDM601_0789 a424a936385b9dcdbea7f644665c9d9e 550 SMART SM00487 179 354 2.4E-23 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain JDM601_3982 310da073545bd066c6c2fb814fc66d8f 233 Pfam PF13522 Glutamine amidotransferase domain 72 200 1.5E-15 T 12-10-2018 JDM601_3982 310da073545bd066c6c2fb814fc66d8f 233 TIGRFAM TIGR03442 TIGR03442: ergothioneine biosynthesis protein EgtC 1 229 6.8E-90 T 12-10-2018 IPR017808 Ergothioneine biosynthesis protein EgtC GO:0052699 JDM601_3982 310da073545bd066c6c2fb814fc66d8f 233 Gene3D G3DSA:3.60.20.10 2 233 7.8E-85 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal JDM601_3982 310da073545bd066c6c2fb814fc66d8f 233 SUPERFAMILY SSF56235 2 229 2.1E-19 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal JDM601_3982 310da073545bd066c6c2fb814fc66d8f 233 Hamap MF_02036 Gamma-glutamyl-hercynylcysteine sulfoxide hydrolase [egtC]. 1 229 35.839 T 12-10-2018 IPR032889 Gamma-glutamyl-hercynylcysteine sulfoxide hydrolase, Actinobacteria GO:0016811|GO:0052699 KEGG: 00340+3.5.1.118|MetaCyc: PWY-7255 JDM601_1180 0e0e575486c0863a5ece0b70e010bef6 187 TIGRFAM TIGR00730 TIGR00730: TIGR00730 family protein 6 180 6.5E-61 T 12-10-2018 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG JDM601_1180 0e0e575486c0863a5ece0b70e010bef6 187 Gene3D G3DSA:3.40.50.450 2 181 4.5E-67 T 12-10-2018 JDM601_1180 0e0e575486c0863a5ece0b70e010bef6 187 SUPERFAMILY SSF102405 6 178 8.39E-52 T 12-10-2018 JDM601_1180 0e0e575486c0863a5ece0b70e010bef6 187 Pfam PF03641 Possible lysine decarboxylase 49 178 7.9E-36 T 12-10-2018 IPR031100 LOG family JDM601_2004 ed7192a96f26af89b027d031447b1979 765 SUPERFAMILY SSF51621 14 582 1.97E-132 T 12-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 JDM601_2004 ed7192a96f26af89b027d031447b1979 765 Gene3D G3DSA:3.20.20.60 410 600 2.0E-47 T 12-10-2018 JDM601_2004 ed7192a96f26af89b027d031447b1979 765 Gene3D G3DSA:3.20.20.60 16 299 1.8E-96 T 12-10-2018 JDM601_2004 ed7192a96f26af89b027d031447b1979 765 ProSitePatterns PS00161 Isocitrate lyase signature. 213 218 - T 12-10-2018 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824 JDM601_2004 ed7192a96f26af89b027d031447b1979 765 Pfam PF00463 Isocitrate lyase family 356 598 3.1E-46 T 12-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 JDM601_2004 ed7192a96f26af89b027d031447b1979 765 Pfam PF00463 Isocitrate lyase family 21 287 2.2E-72 T 12-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 JDM601_0899 2421aaf086044d472826efd55631e1b4 511 SUPERFAMILY SSF53901 283 409 1.86E-14 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 JDM601_0899 2421aaf086044d472826efd55631e1b4 511 Gene3D G3DSA:2.40.50.840 436 511 2.5E-29 T 12-10-2018 JDM601_0899 2421aaf086044d472826efd55631e1b4 511 SUPERFAMILY SSF53901 30 355 2.45E-7 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 JDM601_3501 9e97af5311684c452ea78d1dd05f3725 426 Pfam PF04909 Amidohydrolase 85 374 6.2E-31 T 12-10-2018 IPR006680 Amidohydrolase-related GO:0016787 JDM601_3501 9e97af5311684c452ea78d1dd05f3725 426 Gene3D G3DSA:3.20.20.140 3 373 2.0E-89 T 12-10-2018 JDM601_3501 9e97af5311684c452ea78d1dd05f3725 426 SUPERFAMILY SSF51556 9 383 3.69E-79 T 12-10-2018 IPR032466 Metal-dependent hydrolase JDM601_2220 fce61ee62502f864f137883ee1f101cd 334 TIGRFAM TIGR00750 lao: LAO/AO transport system ATPase 19 329 1.3E-119 T 12-10-2018 IPR005129 SIMIBI class G3E GTPase, ArgK/MeaB GO:0003924|GO:0005525 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 JDM601_2220 fce61ee62502f864f137883ee1f101cd 334 Gene3D G3DSA:3.40.50.300 55 269 4.6E-84 T 12-10-2018 JDM601_2220 fce61ee62502f864f137883ee1f101cd 334 SUPERFAMILY SSF52540 9 331 3.43E-91 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_2220 fce61ee62502f864f137883ee1f101cd 334 Gene3D G3DSA:1.10.287.130 270 332 1.5E-19 T 12-10-2018 JDM601_2220 fce61ee62502f864f137883ee1f101cd 334 Gene3D G3DSA:1.20.5.170 2 51 5.4E-21 T 12-10-2018 JDM601_2220 fce61ee62502f864f137883ee1f101cd 334 Pfam PF03308 ArgK protein 24 300 2.9E-112 T 12-10-2018 JDM601_2220 fce61ee62502f864f137883ee1f101cd 334 SMART SM00382 60 211 0.0087 T 12-10-2018 IPR003593 AAA+ ATPase domain JDM601_1322 cd372b432437746b9cadd0434efc2eda 524 SMART SM00044 315 505 2.6E-6 T 12-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 JDM601_1322 cd372b432437746b9cadd0434efc2eda 524 SMART SM00304 267 319 3.1E-9 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JDM601_1322 cd372b432437746b9cadd0434efc2eda 524 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 348 516 8.0E-23 T 12-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 JDM601_1322 cd372b432437746b9cadd0434efc2eda 524 SUPERFAMILY SSF158472 269 316 9.42E-6 T 12-10-2018 JDM601_1322 cd372b432437746b9cadd0434efc2eda 524 SUPERFAMILY SSF55073 343 519 4.87E-41 T 12-10-2018 IPR029787 Nucleotide cyclase JDM601_1322 cd372b432437746b9cadd0434efc2eda 524 Pfam PF00672 HAMP domain 270 315 3.8E-7 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 JDM601_1322 cd372b432437746b9cadd0434efc2eda 524 Gene3D G3DSA:3.30.70.1230 337 522 9.3E-43 T 12-10-2018 IPR029787 Nucleotide cyclase JDM601_0363 17b805980f97e10f296f296f36f2bbba 442 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 5 427 6.8E-165 T 12-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 JDM601_0363 17b805980f97e10f296f296f36f2bbba 442 Pfam PF00709 Adenylosuccinate synthetase 4 422 4.2E-175 T 12-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 JDM601_0363 17b805980f97e10f296f296f36f2bbba 442 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 132 143 - T 12-10-2018 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 JDM601_0363 17b805980f97e10f296f296f36f2bbba 442 Gene3D G3DSA:3.90.170.10 266 430 1.3E-68 T 12-10-2018 JDM601_0363 17b805980f97e10f296f296f36f2bbba 442 SMART SM00788 3 423 9.4E-276 T 12-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 JDM601_0363 17b805980f97e10f296f296f36f2bbba 442 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 442 198.5 T 12-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 JDM601_0363 17b805980f97e10f296f296f36f2bbba 442 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 10 17 - T 12-10-2018 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 JDM601_0363 17b805980f97e10f296f296f36f2bbba 442 Gene3D G3DSA:3.40.440.10 6 256 6.4E-95 T 12-10-2018 JDM601_0363 17b805980f97e10f296f296f36f2bbba 442 SUPERFAMILY SSF52540 1 428 2.44E-168 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_0363 17b805980f97e10f296f296f36f2bbba 442 Gene3D G3DSA:1.10.300.10 101 200 6.4E-95 T 12-10-2018 JDM601_2579 751a0a7b55117f0c778d1dac62c2fadc 454 Pfam PF00171 Aldehyde dehydrogenase family 4 447 7.2E-151 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 JDM601_2579 751a0a7b55117f0c778d1dac62c2fadc 454 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 228 235 - T 12-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 JDM601_2579 751a0a7b55117f0c778d1dac62c2fadc 454 Gene3D G3DSA:3.40.605.10 3 444 1.1E-158 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 JDM601_2579 751a0a7b55117f0c778d1dac62c2fadc 454 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 256 267 - T 12-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 JDM601_2579 751a0a7b55117f0c778d1dac62c2fadc 454 Gene3D G3DSA:3.40.309.10 232 416 1.1E-158 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 JDM601_2579 751a0a7b55117f0c778d1dac62c2fadc 454 SUPERFAMILY SSF53720 3 449 4.19E-146 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 JDM601_3716 ecbdf2e4988d8afee2665dfb72355cde 382 SUPERFAMILY SSF56645 5 242 1.96E-66 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 JDM601_3716 ecbdf2e4988d8afee2665dfb72355cde 382 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 125 218 1.5E-23 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 JDM601_3716 ecbdf2e4988d8afee2665dfb72355cde 382 Gene3D G3DSA:1.20.140.10 236 381 8.8E-32 T 12-10-2018 JDM601_3716 ecbdf2e4988d8afee2665dfb72355cde 382 Gene3D G3DSA:1.10.540.10 2 119 5.7E-28 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 JDM601_3716 ecbdf2e4988d8afee2665dfb72355cde 382 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 5 117 5.4E-20 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 JDM601_3716 ecbdf2e4988d8afee2665dfb72355cde 382 Gene3D G3DSA:2.40.110.10 125 235 1.8E-35 T 12-10-2018 JDM601_3716 ecbdf2e4988d8afee2665dfb72355cde 382 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 231 374 3.1E-26 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 JDM601_3716 ecbdf2e4988d8afee2665dfb72355cde 382 SUPERFAMILY SSF47203 231 376 2.26E-19 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 JDM601_0522 e006ee65bb79fcf975c20cc0ad83c6e0 414 SUPERFAMILY SSF53383 1 402 1.5E-114 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase JDM601_0522 e006ee65bb79fcf975c20cc0ad83c6e0 414 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 216 252 - T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 JDM601_0522 e006ee65bb79fcf975c20cc0ad83c6e0 414 Pfam PF00202 Aminotransferase class-III 16 399 5.7E-93 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 JDM601_0522 e006ee65bb79fcf975c20cc0ad83c6e0 414 Gene3D G3DSA:3.90.1150.10 1 398 5.6E-153 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 JDM601_0522 e006ee65bb79fcf975c20cc0ad83c6e0 414 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 1 406 94.649 T 12-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 JDM601_0522 e006ee65bb79fcf975c20cc0ad83c6e0 414 Gene3D G3DSA:3.40.640.10 51 298 5.6E-153 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 JDM601_0522 e006ee65bb79fcf975c20cc0ad83c6e0 414 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 1 399 5.9E-181 T 12-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 JDM601_4171 9a7fac48dde4413d9c831c9309bd493f 492 Pfam PF00743 Flavin-binding monooxygenase-like 84 235 1.2E-6 T 12-10-2018 IPR020946 Flavin monooxygenase-like GO:0004499|GO:0050660|GO:0050661|GO:0055114 JDM601_4171 9a7fac48dde4413d9c831c9309bd493f 492 SUPERFAMILY SSF51905 264 429 3.43E-10 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_4171 9a7fac48dde4413d9c831c9309bd493f 492 Gene3D G3DSA:3.50.50.60 317 430 1.8E-5 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_4171 9a7fac48dde4413d9c831c9309bd493f 492 Gene3D G3DSA:3.50.50.60 1 152 2.2E-37 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_4171 9a7fac48dde4413d9c831c9309bd493f 492 Gene3D G3DSA:3.50.50.60 153 227 1.9E-11 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_4171 9a7fac48dde4413d9c831c9309bd493f 492 Pfam PF13450 NAD(P)-binding Rossmann-like domain 9 62 2.4E-9 T 12-10-2018 JDM601_4171 9a7fac48dde4413d9c831c9309bd493f 492 SUPERFAMILY SSF51905 5 301 8.57E-49 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_2273 073e33a9378c7f2212455e39ec9fda00 77 PRINTS PR01651 Protein-export SecG membrane protein signature 23 37 3.6E-5 T 12-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 JDM601_2273 073e33a9378c7f2212455e39ec9fda00 77 PRINTS PR01651 Protein-export SecG membrane protein signature 3 23 3.6E-5 T 12-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 JDM601_2273 073e33a9378c7f2212455e39ec9fda00 77 PRINTS PR01651 Protein-export SecG membrane protein signature 54 76 3.6E-5 T 12-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 JDM601_2273 073e33a9378c7f2212455e39ec9fda00 77 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 3 73 1.1E-17 T 12-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 JDM601_2273 073e33a9378c7f2212455e39ec9fda00 77 Pfam PF03840 Preprotein translocase SecG subunit 5 72 9.4E-16 T 12-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 JDM601_1099 ebb0d1ba2ec99bd1bed01317c2126c81 341 PRINTS PR01782 Mycobacterial cell entry (MCE) protein signature 112 136 7.1E-9 T 12-10-2018 IPR005693 Virulence factor Mce protein JDM601_1099 ebb0d1ba2ec99bd1bed01317c2126c81 341 PRINTS PR01782 Mycobacterial cell entry (MCE) protein signature 331 341 7.1E-9 T 12-10-2018 IPR005693 Virulence factor Mce protein JDM601_1099 ebb0d1ba2ec99bd1bed01317c2126c81 341 PRINTS PR01782 Mycobacterial cell entry (MCE) protein signature 230 249 7.1E-9 T 12-10-2018 IPR005693 Virulence factor Mce protein JDM601_1099 ebb0d1ba2ec99bd1bed01317c2126c81 341 PRINTS PR01782 Mycobacterial cell entry (MCE) protein signature 75 91 7.1E-9 T 12-10-2018 IPR005693 Virulence factor Mce protein JDM601_1099 ebb0d1ba2ec99bd1bed01317c2126c81 341 TIGRFAM TIGR00996 Mtu_fam_mce: virulence factor Mce family protein 2 275 8.0E-52 T 12-10-2018 IPR005693 Virulence factor Mce protein JDM601_1099 ebb0d1ba2ec99bd1bed01317c2126c81 341 Pfam PF02470 MlaD protein 26 97 5.7E-15 T 12-10-2018 IPR003399 Mce/MlaD JDM601_2486 852914dc130527ef5cae2bf2f98eeade 211 Pfam PF00440 Bacterial regulatory proteins, tetR family 21 67 1.2E-6 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_2486 852914dc130527ef5cae2bf2f98eeade 211 Gene3D G3DSA:1.10.10.60 4 62 2.1E-9 T 12-10-2018 JDM601_2486 852914dc130527ef5cae2bf2f98eeade 211 Gene3D G3DSA:1.10.357.10 63 200 3.0E-15 T 12-10-2018 JDM601_2486 852914dc130527ef5cae2bf2f98eeade 211 SUPERFAMILY SSF48498 91 193 3.0E-5 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily JDM601_2486 852914dc130527ef5cae2bf2f98eeade 211 SUPERFAMILY SSF46689 13 80 3.75E-11 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JDM601_3147 6589f23ff9498338a2472f5d406493fa 263 Pfam PF02544 3-oxo-5-alpha-steroid 4-dehydrogenase 111 263 6.3E-38 T 12-10-2018 IPR001104 3-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal GO:0005737|GO:0006629|GO:0016021|GO:0016627 JDM601_3147 6589f23ff9498338a2472f5d406493fa 263 PIRSF PIRSF015596 1 263 7.0E-80 T 12-10-2018 IPR016636 3-oxo-5-alpha-steroid 4-dehydrogenase GO:0003865|GO:0008202|GO:0016020|GO:0055114 KEGG: 00140+1.3.1.22|KEGG: 00905+1.3.1.22|MetaCyc: PWY-6032|MetaCyc: PWY-7455|Reactome: R-HSA-193048 JDM601_0238 fac1b13ab0171a4ff30b5c6ee64e27f9 148 Gene3D G3DSA:2.60.40.790 10 147 1.4E-28 T 12-10-2018 IPR008978 HSP20-like chaperone JDM601_0238 fac1b13ab0171a4ff30b5c6ee64e27f9 148 Pfam PF00011 Hsp20/alpha crystallin family 43 146 1.1E-14 T 12-10-2018 IPR002068 Alpha crystallin/Hsp20 domain JDM601_0238 fac1b13ab0171a4ff30b5c6ee64e27f9 148 SUPERFAMILY SSF49764 12 135 3.28E-27 T 12-10-2018 IPR008978 HSP20-like chaperone JDM601_3440 4957c6eb34da37b44ff02ece84c82a62 221 Pfam PF00440 Bacterial regulatory proteins, tetR family 20 67 7.3E-8 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_3440 4957c6eb34da37b44ff02ece84c82a62 221 SUPERFAMILY SSF46689 8 88 2.51E-13 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JDM601_3440 4957c6eb34da37b44ff02ece84c82a62 221 Gene3D G3DSA:1.10.357.10 17 212 3.7E-32 T 12-10-2018 JDM601_3371 b41f33e9d0ac9fb62036608d939993f0 409 Gene3D G3DSA:3.20.20.140 4 389 1.4E-90 T 12-10-2018 JDM601_3371 b41f33e9d0ac9fb62036608d939993f0 409 SUPERFAMILY SSF51556 7 391 9.83E-62 T 12-10-2018 IPR032466 Metal-dependent hydrolase JDM601_3371 b41f33e9d0ac9fb62036608d939993f0 409 Pfam PF04909 Amidohydrolase 99 388 8.8E-23 T 12-10-2018 IPR006680 Amidohydrolase-related GO:0016787 JDM601_0536 46b521873f9e7951ddb315a3e7cf9022 100 Gene3D G3DSA:1.10.150.430 1 99 3.3E-39 T 12-10-2018 JDM601_0536 46b521873f9e7951ddb315a3e7cf9022 100 Pfam PF11829 Protein of unknown function (DUF3349) 4 91 5.1E-34 T 12-10-2018 IPR021784 Protein of unknown function DUF3349 JDM601_3543 0ecbd1d81af90a8e3d69c6769953f719 143 Gene3D G3DSA:3.40.30.10 40 143 2.1E-17 T 12-10-2018 JDM601_3543 0ecbd1d81af90a8e3d69c6769953f719 143 SUPERFAMILY SSF52833 47 142 1.65E-21 T 12-10-2018 IPR036249 Thioredoxin-like superfamily JDM601_3543 0ecbd1d81af90a8e3d69c6769953f719 143 Pfam PF00085 Thioredoxin 53 138 1.4E-11 T 12-10-2018 IPR013766 Thioredoxin domain GO:0045454 JDM601_3543 0ecbd1d81af90a8e3d69c6769953f719 143 ProSitePatterns PS00194 Thioredoxin family active site. 56 74 - T 12-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 JDM601_1631 529a47a9144ed2b12786abeeebb69588 153 Pfam PF01083 Cutinase 2 151 1.0E-30 T 12-10-2018 IPR000675 Cutinase/acetylxylan esterase GO:0016787 JDM601_1631 529a47a9144ed2b12786abeeebb69588 153 SUPERFAMILY SSF53474 2 138 7.77E-28 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_1631 529a47a9144ed2b12786abeeebb69588 153 SMART SM01110 1 153 2.0E-45 T 12-10-2018 IPR000675 Cutinase/acetylxylan esterase GO:0016787 JDM601_1631 529a47a9144ed2b12786abeeebb69588 153 Gene3D G3DSA:3.40.50.1820 1 153 6.1E-32 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_2422 410342716e84b8c9b662853a7467600e 233 SUPERFAMILY SSF54909 4 232 1.98E-75 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel JDM601_2422 410342716e84b8c9b662853a7467600e 233 Pfam PF06778 Chlorite dismutase 35 223 7.1E-71 T 12-10-2018 IPR010644 Putative heme-dependent peroxidase/Chlorite dismutase JDM601_2422 410342716e84b8c9b662853a7467600e 233 Gene3D G3DSA:3.30.70.1030 12 122 2.7E-7 T 12-10-2018 JDM601_2422 410342716e84b8c9b662853a7467600e 233 Gene3D G3DSA:3.30.70.1100 129 232 5.2E-35 T 12-10-2018 JDM601_3329 e25da6a3d072b3a0ed1ac6c8f005c47b 105 Pfam PF00366 Ribosomal protein S17 32 99 1.1E-30 T 12-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JDM601_3329 e25da6a3d072b3a0ed1ac6c8f005c47b 105 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 27 98 1.0E-32 T 12-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JDM601_3329 e25da6a3d072b3a0ed1ac6c8f005c47b 105 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 27 98 1.4E-34 T 12-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JDM601_3329 e25da6a3d072b3a0ed1ac6c8f005c47b 105 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 27 102 24.72 T 12-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JDM601_3329 e25da6a3d072b3a0ed1ac6c8f005c47b 105 SUPERFAMILY SSF50249 26 104 8.14E-31 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold JDM601_3329 e25da6a3d072b3a0ed1ac6c8f005c47b 105 Gene3D G3DSA:2.40.50.140 26 105 2.3E-34 T 12-10-2018 JDM601_3329 e25da6a3d072b3a0ed1ac6c8f005c47b 105 PRINTS PR00973 Ribosomal protein S17 family signature 78 88 1.7E-12 T 12-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JDM601_3329 e25da6a3d072b3a0ed1ac6c8f005c47b 105 PRINTS PR00973 Ribosomal protein S17 family signature 88 95 1.7E-12 T 12-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JDM601_3329 e25da6a3d072b3a0ed1ac6c8f005c47b 105 PRINTS PR00973 Ribosomal protein S17 family signature 46 69 1.7E-12 T 12-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JDM601_3329 e25da6a3d072b3a0ed1ac6c8f005c47b 105 ProSitePatterns PS00056 Ribosomal protein S17 signature. 78 90 - T 12-10-2018 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JDM601_3634 d741118d4c446d8c56c7365c9602a026 64 Gene3D G3DSA:3.30.70.20 1 63 1.4E-16 T 12-10-2018 JDM601_3634 d741118d4c446d8c56c7365c9602a026 64 SUPERFAMILY SSF54862 2 62 1.97E-9 T 12-10-2018 JDM601_3634 d741118d4c446d8c56c7365c9602a026 64 Pfam PF13459 4Fe-4S single cluster domain 3 59 1.9E-13 T 12-10-2018 JDM601_2354 0d9e528c9fb20d2201e549f1efc51dff 135 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 16 130 5.9E-27 T 12-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 JDM601_2354 0d9e528c9fb20d2201e549f1efc51dff 135 Gene3D G3DSA:3.10.129.10 3 135 9.5E-36 T 12-10-2018 JDM601_2354 0d9e528c9fb20d2201e549f1efc51dff 135 SUPERFAMILY SSF54637 6 134 2.33E-30 T 12-10-2018 IPR029069 HotDog domain superfamily JDM601_2354 0d9e528c9fb20d2201e549f1efc51dff 135 Pfam PF03061 Thioesterase superfamily 47 123 7.8E-16 T 12-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 JDM601_3861 b4113a82e70c8dfde3a8f5ac4adba613 596 Gene3D G3DSA:2.60.40.1180 505 596 9.6E-35 T 12-10-2018 IPR013780 Glycosyl hydrolase, all-beta JDM601_3861 b4113a82e70c8dfde3a8f5ac4adba613 596 Gene3D G3DSA:3.90.400.10 145 214 1.5E-226 T 12-10-2018 JDM601_3861 b4113a82e70c8dfde3a8f5ac4adba613 596 Pfam PF00128 Alpha amylase, catalytic domain 70 426 1.7E-75 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 JDM601_3861 b4113a82e70c8dfde3a8f5ac4adba613 596 Gene3D G3DSA:3.20.20.80 47 499 1.5E-226 T 12-10-2018 JDM601_3861 b4113a82e70c8dfde3a8f5ac4adba613 596 SMART SM00642 55 457 4.5E-117 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 JDM601_3861 b4113a82e70c8dfde3a8f5ac4adba613 596 SUPERFAMILY SSF51011 510 588 5.28E-16 T 12-10-2018 JDM601_3861 b4113a82e70c8dfde3a8f5ac4adba613 596 TIGRFAM TIGR02456 treS_nterm: trehalose synthase 47 588 7.1E-286 T 12-10-2018 IPR012810 Trehalose synthase/alpha-amylase, N-terminal GO:0003824|GO:0005975 KEGG: 00500+5.4.99.16|MetaCyc: PWY-2622|MetaCyc: PWY-7900 JDM601_3861 b4113a82e70c8dfde3a8f5ac4adba613 596 Pfam PF16657 Maltogenic Amylase, C-terminal domain 505 585 1.9E-22 T 12-10-2018 IPR032091 Maltogenic Amylase, C-terminal JDM601_3861 b4113a82e70c8dfde3a8f5ac4adba613 596 SUPERFAMILY SSF51445 45 502 1.8E-131 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily JDM601_3785 e243c3230681364e4ebab9af181667cc 187 Gene3D G3DSA:1.10.10.60 1 44 7.3E-12 T 12-10-2018 JDM601_3785 e243c3230681364e4ebab9af181667cc 187 Pfam PF00440 Bacterial regulatory proteins, tetR family 8 50 1.4E-8 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_3785 e243c3230681364e4ebab9af181667cc 187 SUPERFAMILY SSF48498 66 184 1.29E-14 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily JDM601_3785 e243c3230681364e4ebab9af181667cc 187 Gene3D G3DSA:1.10.357.10 46 185 7.5E-24 T 12-10-2018 JDM601_3785 e243c3230681364e4ebab9af181667cc 187 SUPERFAMILY SSF46689 3 58 9.98E-10 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JDM601_3785 e243c3230681364e4ebab9af181667cc 187 Pfam PF16859 Bacterial transcriptional repressor C-terminal 63 158 2.5E-18 T 12-10-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal JDM601_1729 9e790265c1b5c5883c7d9ec1f645d9c7 327 SUPERFAMILY SSF48576 7 326 2.34E-70 T 12-10-2018 IPR008949 Isoprenoid synthase domain superfamily JDM601_1729 9e790265c1b5c5883c7d9ec1f645d9c7 327 Gene3D G3DSA:1.10.600.10 1 327 1.4E-104 T 12-10-2018 IPR008949 Isoprenoid synthase domain superfamily JDM601_1729 9e790265c1b5c5883c7d9ec1f645d9c7 327 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 203 215 - T 12-10-2018 IPR033749 Polyprenyl synthetase, conserved site JDM601_1729 9e790265c1b5c5883c7d9ec1f645d9c7 327 Pfam PF00348 Polyprenyl synthetase 13 254 1.3E-47 T 12-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 JDM601_1729 9e790265c1b5c5883c7d9ec1f645d9c7 327 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 59 73 - T 12-10-2018 IPR033749 Polyprenyl synthetase, conserved site JDM601_2617 6e81d3eaf64d54a00b73c11d99deb5c4 378 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 68 296 6.4E-72 T 12-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 JDM601_2617 6e81d3eaf64d54a00b73c11d99deb5c4 378 Pfam PF02481 DNA recombination-mediator protein A 71 289 3.4E-68 T 12-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 JDM601_2617 6e81d3eaf64d54a00b73c11d99deb5c4 378 Gene3D G3DSA:3.40.50.450 1 301 9.1E-87 T 12-10-2018 JDM601_2617 6e81d3eaf64d54a00b73c11d99deb5c4 378 SUPERFAMILY SSF102405 107 296 4.58E-33 T 12-10-2018 JDM601_2539 b3fbf3d6cf8810c6b10ed8cf78404af9 229 SUPERFAMILY SSF47979 72 144 3.01E-26 T 12-10-2018 IPR036421 Iron dependent repressor, metal binding and dimerisation domain superfamily GO:0046914|GO:0046983 JDM601_2539 b3fbf3d6cf8810c6b10ed8cf78404af9 229 SUPERFAMILY SSF50037 157 228 2.75E-5 T 12-10-2018 IPR008988 Transcriptional repressor, C-terminal JDM601_2539 b3fbf3d6cf8810c6b10ed8cf78404af9 229 Pfam PF02742 Iron dependent repressor, metal binding and dimerisation domain 72 140 2.9E-31 T 12-10-2018 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 JDM601_2539 b3fbf3d6cf8810c6b10ed8cf78404af9 229 SMART SM00899 152 229 4.8E-9 T 12-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 JDM601_2539 b3fbf3d6cf8810c6b10ed8cf78404af9 229 SUPERFAMILY SSF46785 8 105 5.34E-12 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JDM601_2539 b3fbf3d6cf8810c6b10ed8cf78404af9 229 Gene3D G3DSA:1.10.10.10 8 144 7.3E-50 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JDM601_2539 b3fbf3d6cf8810c6b10ed8cf78404af9 229 SMART SM00529 33 132 1.3E-43 T 12-10-2018 IPR022689 Iron dependent repressor GO:0003700|GO:0006355|GO:0046914 JDM601_2539 b3fbf3d6cf8810c6b10ed8cf78404af9 229 Pfam PF01325 Iron dependent repressor, N-terminal DNA binding domain 10 69 3.1E-21 T 12-10-2018 IPR022687 DTXR-type HTH domain GO:0003677 JDM601_2539 b3fbf3d6cf8810c6b10ed8cf78404af9 229 Pfam PF04023 FeoA domain 152 228 1.6E-18 T 12-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 JDM601_2116 cef859a401c59dfc62a1aab838c910ce 76 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 4 49 1.6E-16 T 12-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 JDM601_2116 cef859a401c59dfc62a1aab838c910ce 76 Pfam PF02416 mttA/Hcf106 family 4 51 1.9E-19 T 12-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 JDM601_2116 cef859a401c59dfc62a1aab838c910ce 76 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 75 17.757 T 12-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 JDM601_2194 26788879f4dab152b5ce8727bfddbc91 995 SUPERFAMILY SSF82866 691 899 4.84E-29 T 12-10-2018 JDM601_2194 26788879f4dab152b5ce8727bfddbc91 995 TIGRFAM TIGR00833 actII: transport protein 2 899 9.5E-295 T 12-10-2018 IPR004707 Membrane transport protein MmpL family GO:0016021 JDM601_2194 26788879f4dab152b5ce8727bfddbc91 995 Gene3D G3DSA:1.20.1640.10 144 326 5.7E-7 T 12-10-2018 JDM601_2194 26788879f4dab152b5ce8727bfddbc91 995 SUPERFAMILY SSF82866 124 321 8.24E-27 T 12-10-2018 JDM601_2194 26788879f4dab152b5ce8727bfddbc91 995 Pfam PF03176 MMPL family 572 903 6.0E-96 T 12-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 JDM601_2194 26788879f4dab152b5ce8727bfddbc91 995 Pfam PF03176 MMPL family 24 353 9.3E-112 T 12-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 JDM601_4155 1faa1c71c0f3cbb324135872ecaca4a0 271 SUPERFAMILY SSF51695 11 266 3.66E-61 T 12-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 JDM601_4155 1faa1c71c0f3cbb324135872ecaca4a0 271 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 17 262 3.9E-47 T 12-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 JDM601_4155 1faa1c71c0f3cbb324135872ecaca4a0 271 Gene3D G3DSA:3.20.20.190 1 270 6.1E-67 T 12-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 JDM601_0356 1c5f176e29b7a75020589f71ea73a02e 232 Pfam PF09335 SNARE associated Golgi protein 47 172 2.4E-20 T 12-10-2018 IPR032816 SNARE associated Golgi protein JDM601_3263 54458f7b1a949110f8d7d0d83f72c4c4 143 TIGRFAM TIGR00028 Mtu_PIN_fam: toxin-antitoxin system PIN domain toxin 2 141 6.1E-38 T 12-10-2018 IPR006226 PIN domain toxin GO:0016788 JDM601_3263 54458f7b1a949110f8d7d0d83f72c4c4 143 SUPERFAMILY SSF88723 1 139 2.5E-20 T 12-10-2018 IPR029060 PIN-like domain superfamily JDM601_3263 54458f7b1a949110f8d7d0d83f72c4c4 143 Hamap MF_00265 tRNA(fMet)-specific endonuclease VapC [vapC]. 1 139 14.945 T 12-10-2018 IPR022907 VapC family GO:0004540 JDM601_3263 54458f7b1a949110f8d7d0d83f72c4c4 143 Pfam PF01850 PIN domain 1 132 5.6E-9 T 12-10-2018 IPR002716 PIN domain JDM601_3263 54458f7b1a949110f8d7d0d83f72c4c4 143 Gene3D G3DSA:3.40.50.1010 1 138 1.4E-13 T 12-10-2018 JDM601_0227 336ede156f438596fb2b71a4f0d02bf6 237 Gene3D G3DSA:3.40.50.880 1 221 3.9E-70 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like JDM601_0227 336ede156f438596fb2b71a4f0d02bf6 237 SUPERFAMILY SSF52317 1 184 2.22E-50 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like JDM601_0227 336ede156f438596fb2b71a4f0d02bf6 237 Pfam PF01965 DJ-1/PfpI family 2 160 1.5E-27 T 12-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 JDM601_2605 f729fc83816dd88383c6b8f77f9a5e68 218 ProDom PD037531 MEMBRANE HYDROGENASE SUBUNIT COMPONENT HYDROGENASE-4 E OXIDOREDUCTASE PRECURSOR SIGNAL 1.-.-.- 23 193 1.0E-23 T 12-10-2018 JDM601_0484 f4571974a0734a47abcbee300b403546 101 Pfam PF11196 Protein of unknown function (DUF2834) 1 92 5.3E-26 T 12-10-2018 IPR021362 Protein of unknown function DUF2834 JDM601_3367 8eef28d12ed356b0298cbe1e04b198ce 417 Pfam PF02515 CoA-transferase family III 14 393 9.9E-79 T 12-10-2018 IPR003673 CoA-transferase family III GO:0003824 JDM601_3367 8eef28d12ed356b0298cbe1e04b198ce 417 SUPERFAMILY SSF89796 12 416 2.62E-93 T 12-10-2018 IPR023606 CoA-transferase family III domain superfamily JDM601_3367 8eef28d12ed356b0298cbe1e04b198ce 417 Gene3D G3DSA:3.30.1540.10 246 345 8.3E-88 T 12-10-2018 JDM601_3367 8eef28d12ed356b0298cbe1e04b198ce 417 Gene3D G3DSA:3.40.50.10540 14 410 8.3E-88 T 12-10-2018 IPR023606 CoA-transferase family III domain superfamily JDM601_1101 b2246918d561c55353efa3a643a08f20 480 Pfam PF02470 MlaD protein 47 124 5.7E-7 T 12-10-2018 IPR003399 Mce/MlaD JDM601_1101 b2246918d561c55353efa3a643a08f20 480 Pfam PF11887 Cholesterol uptake porter CUP1 of Mce4, putative 176 369 2.2E-19 T 12-10-2018 IPR024516 Mammalian cell entry, C-terminal JDM601_4304 19e033685416fcde6d47bfe674f72bae 458 Gene3D G3DSA:3.40.50.300 184 458 6.9E-100 T 12-10-2018 JDM601_4304 19e033685416fcde6d47bfe674f72bae 458 SMART SM00382 218 406 3.7E-5 T 12-10-2018 IPR003593 AAA+ ATPase domain JDM601_4304 19e033685416fcde6d47bfe674f72bae 458 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 24 457 9.9E-160 T 12-10-2018 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 JDM601_4304 19e033685416fcde6d47bfe674f72bae 458 Pfam PF00772 DnaB-like helicase N terminal domain 23 125 1.2E-33 T 12-10-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 JDM601_4304 19e033685416fcde6d47bfe674f72bae 458 Pfam PF03796 DnaB-like helicase C terminal domain 201 455 8.0E-102 T 12-10-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 JDM601_4304 19e033685416fcde6d47bfe674f72bae 458 SUPERFAMILY SSF48024 22 133 7.85E-38 T 12-10-2018 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily GO:0003678|GO:0005524|GO:0006260 JDM601_4304 19e033685416fcde6d47bfe674f72bae 458 Gene3D G3DSA:1.10.860.10 23 166 1.4E-60 T 12-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal JDM601_4304 19e033685416fcde6d47bfe674f72bae 458 SUPERFAMILY SSF52540 201 444 1.62E-51 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_4150 d36ec22e4cbbb90de1da693cc3b9a4cf 251 Pfam PF02517 CAAX protease self-immunity 146 234 9.0E-17 T 12-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 JDM601_3941 3a3551cca3a49417a70c8fe55d681543 391 SUPERFAMILY SSF52540 42 339 4.09E-42 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_3941 3a3551cca3a49417a70c8fe55d681543 391 Gene3D G3DSA:3.40.50.300 166 388 8.9E-53 T 12-10-2018 JDM601_3941 3a3551cca3a49417a70c8fe55d681543 391 Gene3D G3DSA:3.30.450.90 57 165 2.1E-16 T 12-10-2018 JDM601_3941 3a3551cca3a49417a70c8fe55d681543 391 Pfam PF00437 Type II/IV secretion system protein 60 340 2.1E-67 T 12-10-2018 IPR001482 Type II/IV secretion system protein JDM601_3941 3a3551cca3a49417a70c8fe55d681543 391 TIGRFAM TIGR03819 heli_sec_ATPase: helicase/secretion neighborhood ATPase 5 352 6.6E-153 T 12-10-2018 IPR022399 Helicase/secretion neighbourhood ATPase JDM601_1221 9a727ae9f15ef759d98a2e54618c6b3d 379 Pfam PF01757 Acyltransferase family 23 372 6.1E-30 T 12-10-2018 IPR002656 Acyltransferase 3 GO:0016747 JDM601_3935 02c78cda7998999ccb6c0a964f717d5f 110 TIGRFAM TIGR03816 tadE_like_DECH: helicase/secretion neighborhood TadE-like protein 1 101 1.0E-23 T 12-10-2018 IPR021202 Apoptosis inhibitor Rv3654c-like JDM601_3935 02c78cda7998999ccb6c0a964f717d5f 110 Pfam PF13400 Putative Flp pilus-assembly TadE/G-like 2 44 4.1E-6 T 12-10-2018 IPR028087 Putative Flp pilus-assembly TadG-like, N-terminal JDM601_0694 51801f6113a393a46fece0c6ee405422 124 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 12-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JDM601_0694 51801f6113a393a46fece0c6ee405422 124 Gene3D G3DSA:2.40.50.140 1 124 8.2E-62 T 12-10-2018 JDM601_0694 51801f6113a393a46fece0c6ee405422 124 PRINTS PR01034 Ribosomal protein S12 signature 77 94 1.8E-58 T 12-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JDM601_0694 51801f6113a393a46fece0c6ee405422 124 PRINTS PR01034 Ribosomal protein S12 signature 42 57 1.8E-58 T 12-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JDM601_0694 51801f6113a393a46fece0c6ee405422 124 PRINTS PR01034 Ribosomal protein S12 signature 58 77 1.8E-58 T 12-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JDM601_0694 51801f6113a393a46fece0c6ee405422 124 PRINTS PR01034 Ribosomal protein S12 signature 94 110 1.8E-58 T 12-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JDM601_0694 51801f6113a393a46fece0c6ee405422 124 PRINTS PR01034 Ribosomal protein S12 signature 27 42 1.8E-58 T 12-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JDM601_0694 51801f6113a393a46fece0c6ee405422 124 PRINTS PR01034 Ribosomal protein S12 signature 110 122 1.8E-58 T 12-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JDM601_0694 51801f6113a393a46fece0c6ee405422 124 PIRSF PIRSF002133 1 124 5.9E-54 T 12-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JDM601_0694 51801f6113a393a46fece0c6ee405422 124 SUPERFAMILY SSF50249 2 123 7.28E-52 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold JDM601_0694 51801f6113a393a46fece0c6ee405422 124 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 39.652 T 12-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JDM601_0694 51801f6113a393a46fece0c6ee405422 124 Pfam PF00164 Ribosomal protein S12/S23 12 123 2.2E-42 T 12-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JDM601_0694 51801f6113a393a46fece0c6ee405422 124 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 123 3.7E-67 T 12-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JDM601_1526 ab706ba2ee6f7136fe4ce8b58c4e4237 89 Gene3D G3DSA:1.20.58.1000 4 88 5.6E-23 T 12-10-2018 IPR038390 Metal-sensitive transcriptional repressor superfamily JDM601_1526 ab706ba2ee6f7136fe4ce8b58c4e4237 89 Pfam PF02583 Metal-sensitive transcriptional repressor 9 83 6.8E-24 T 12-10-2018 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 JDM601_2940 61ddb56b6666330dc537e413afbbd6d4 57 Pfam PF05532 CsbD-like 5 57 4.5E-16 T 12-10-2018 IPR008462 CsbD-like domain JDM601_2940 61ddb56b6666330dc537e413afbbd6d4 57 SUPERFAMILY SSF69047 5 56 7.72E-7 T 12-10-2018 IPR036629 YjbJ superfamily JDM601_0595 0d047c576dfd5b03bdba7628e40eeb59 167 Pfam PF04471 Restriction endonuclease 29 139 5.3E-22 T 12-10-2018 IPR007560 Restriction endonuclease type IV, Mrr GO:0003677|GO:0004519|GO:0009307 JDM601_0595 0d047c576dfd5b03bdba7628e40eeb59 167 SUPERFAMILY SSF52980 34 143 2.63E-11 T 12-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 JDM601_2268 6ad2642d606a7c669a723ab40a532ee9 370 ProSitePatterns PS01054 Transaldolase signature 1. 43 51 - T 12-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 JDM601_2268 6ad2642d606a7c669a723ab40a532ee9 370 TIGRFAM TIGR00876 tal_mycobact: transaldolase 13 360 2.5E-168 T 12-10-2018 IPR004732 Transaldolase type 2 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723 JDM601_2268 6ad2642d606a7c669a723ab40a532ee9 370 Hamap MF_00493 Transaldolase [tal]. 1 370 165.226 T 12-10-2018 IPR004732 Transaldolase type 2 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723 JDM601_2268 6ad2642d606a7c669a723ab40a532ee9 370 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 17 361 1.1E-83 T 12-10-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 JDM601_2268 6ad2642d606a7c669a723ab40a532ee9 370 Gene3D G3DSA:3.20.20.70 5 367 8.3E-159 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JDM601_2268 6ad2642d606a7c669a723ab40a532ee9 370 PIRSF PIRSF036915 1 370 2.0E-176 T 12-10-2018 IPR004732 Transaldolase type 2 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723 JDM601_2268 6ad2642d606a7c669a723ab40a532ee9 370 SUPERFAMILY SSF51569 8 361 4.27E-78 T 12-10-2018 JDM601_1538 fbff8f5b4f0504622101311b61b807bb 123 SUPERFAMILY SSF54427 1 118 1.27E-21 T 12-10-2018 IPR032710 NTF2-like domain superfamily JDM601_1538 fbff8f5b4f0504622101311b61b807bb 123 Gene3D G3DSA:3.10.450.50 1 122 6.6E-23 T 12-10-2018 JDM601_1538 fbff8f5b4f0504622101311b61b807bb 123 Pfam PF12680 SnoaL-like domain 8 112 1.3E-15 T 12-10-2018 IPR037401 SnoaL-like domain JDM601_3943 57b058c8f81ecf90d4b8ef75ffc1c9da 285 SUPERFAMILY SSF56784 24 236 4.29E-29 T 12-10-2018 IPR036412 HAD-like superfamily JDM601_3943 57b058c8f81ecf90d4b8ef75ffc1c9da 285 Gene3D G3DSA:3.40.50.1000 28 239 1.3E-66 T 12-10-2018 IPR023214 HAD superfamily JDM601_3943 57b058c8f81ecf90d4b8ef75ffc1c9da 285 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 27 226 1.4E-68 T 12-10-2018 IPR006385 HAD-superfamily hydrolase, subfamily IB, SerB1-like JDM601_3943 57b058c8f81ecf90d4b8ef75ffc1c9da 285 Gene3D G3DSA:1.20.1440.100 39 114 1.3E-66 T 12-10-2018 JDM601_3943 57b058c8f81ecf90d4b8ef75ffc1c9da 285 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 27 215 2.3E-23 T 12-10-2018 JDM601_3943 57b058c8f81ecf90d4b8ef75ffc1c9da 285 Pfam PF12710 haloacid dehalogenase-like hydrolase 28 213 1.5E-31 T 12-10-2018 JDM601_1905 d0c05eab6b2dbbedcbe6b1b4e3f39131 407 Gene3D G3DSA:1.20.1260.20 1 173 4.4E-67 T 12-10-2018 IPR038332 PPE superfamily JDM601_1905 d0c05eab6b2dbbedcbe6b1b4e3f39131 407 Pfam PF00823 PPE family 5 160 1.8E-59 T 12-10-2018 IPR000030 PPE family JDM601_1905 d0c05eab6b2dbbedcbe6b1b4e3f39131 407 Pfam PF12484 Polymorphic PE/PPE proteins C terminal 301 376 1.2E-4 T 12-10-2018 IPR022171 PPE family, C-terminal JDM601_1905 d0c05eab6b2dbbedcbe6b1b4e3f39131 407 SUPERFAMILY SSF140459 2 173 2.88E-62 T 12-10-2018 JDM601_2301 e49d7006c85065a3fbcb64529d0db93a 498 Gene3D G3DSA:3.50.50.60 320 490 1.1E-27 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_2301 e49d7006c85065a3fbcb64529d0db93a 498 Pfam PF13738 Pyridine nucleotide-disulphide oxidoreductase 10 211 7.6E-15 T 12-10-2018 JDM601_2301 e49d7006c85065a3fbcb64529d0db93a 498 Gene3D G3DSA:3.50.50.60 1 167 6.5E-54 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_2301 e49d7006c85065a3fbcb64529d0db93a 498 SUPERFAMILY SSF51905 9 410 3.24E-52 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_2301 e49d7006c85065a3fbcb64529d0db93a 498 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 174 198 8.7E-6 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 JDM601_2301 e49d7006c85065a3fbcb64529d0db93a 498 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 8 30 8.7E-6 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 JDM601_1271 52807b83b954239fe5b510e1714d678f 168 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 8 81 2.7E-7 T 12-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 JDM601_1271 52807b83b954239fe5b510e1714d678f 168 Gene3D G3DSA:3.40.50.1240 1 168 7.8E-45 T 12-10-2018 IPR029033 Histidine phosphatase superfamily JDM601_1271 52807b83b954239fe5b510e1714d678f 168 SMART SM00855 7 115 7.4E-8 T 12-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 JDM601_1271 52807b83b954239fe5b510e1714d678f 168 SUPERFAMILY SSF53254 5 151 1.16E-19 T 12-10-2018 IPR029033 Histidine phosphatase superfamily JDM601_2844 d6015f1c33b0a94c6432ebfa3594c9d5 300 Pfam PF00924 Mechanosensitive ion channel 84 288 1.4E-35 T 12-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 JDM601_2844 d6015f1c33b0a94c6432ebfa3594c9d5 300 Gene3D G3DSA:3.30.70.100 198 288 3.7E-19 T 12-10-2018 JDM601_2844 d6015f1c33b0a94c6432ebfa3594c9d5 300 SUPERFAMILY SSF50182 126 191 1.63E-11 T 12-10-2018 IPR010920 LSM domain superfamily JDM601_2844 d6015f1c33b0a94c6432ebfa3594c9d5 300 SUPERFAMILY SSF82689 195 289 2.35E-8 T 12-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 JDM601_2844 d6015f1c33b0a94c6432ebfa3594c9d5 300 Gene3D G3DSA:2.30.30.60 141 196 1.2E-13 T 12-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily JDM601_0715 1cf15ed40304c0b0e956bbb17457086e 340 Gene3D G3DSA:3.40.50.10540 4 323 1.2E-88 T 12-10-2018 IPR023606 CoA-transferase family III domain superfamily JDM601_0715 1cf15ed40304c0b0e956bbb17457086e 340 SUPERFAMILY SSF89796 2 338 9.94E-94 T 12-10-2018 IPR023606 CoA-transferase family III domain superfamily JDM601_0715 1cf15ed40304c0b0e956bbb17457086e 340 Pfam PF02515 CoA-transferase family III 5 309 5.0E-83 T 12-10-2018 IPR003673 CoA-transferase family III GO:0003824 JDM601_0715 1cf15ed40304c0b0e956bbb17457086e 340 Gene3D G3DSA:3.30.1540.10 212 298 1.2E-88 T 12-10-2018 JDM601_1881 2685908a2d77b8ec05139b141d17c132 382 Pfam PF01028 Eukaryotic DNA topoisomerase I, catalytic core 81 283 2.1E-19 T 12-10-2018 IPR013500 DNA topoisomerase I, catalytic core, eukaryotic-type GO:0003677|GO:0003917|GO:0006265 JDM601_1881 2685908a2d77b8ec05139b141d17c132 382 Gene3D G3DSA:3.90.15.10 112 232 1.0E-61 T 12-10-2018 IPR014711 DNA topoisomerase I, catalytic core, alpha-helical subdomain, eukaryotic-type GO:0003677|GO:0003917|GO:0006265 JDM601_1881 2685908a2d77b8ec05139b141d17c132 382 SUPERFAMILY SSF55869 19 82 1.12E-20 T 12-10-2018 IPR035447 DNA topoisomerase I, N-terminal JDM601_1881 2685908a2d77b8ec05139b141d17c132 382 Gene3D G3DSA:3.30.66.10 3 88 9.5E-30 T 12-10-2018 IPR035447 DNA topoisomerase I, N-terminal JDM601_1881 2685908a2d77b8ec05139b141d17c132 382 PRINTS PR00416 Eukaryotic DNA topoisomerase I signature 165 181 5.5E-8 T 12-10-2018 IPR001631 DNA topoisomerase I GO:0003677|GO:0003917|GO:0006265 JDM601_1881 2685908a2d77b8ec05139b141d17c132 382 PRINTS PR00416 Eukaryotic DNA topoisomerase I signature 282 293 5.5E-8 T 12-10-2018 IPR001631 DNA topoisomerase I GO:0003677|GO:0003917|GO:0006265 JDM601_1881 2685908a2d77b8ec05139b141d17c132 382 PRINTS PR00416 Eukaryotic DNA topoisomerase I signature 121 140 5.5E-8 T 12-10-2018 IPR001631 DNA topoisomerase I GO:0003677|GO:0003917|GO:0006265 JDM601_1881 2685908a2d77b8ec05139b141d17c132 382 PRINTS PR00416 Eukaryotic DNA topoisomerase I signature 231 245 5.5E-8 T 12-10-2018 IPR001631 DNA topoisomerase I GO:0003677|GO:0003917|GO:0006265 JDM601_1881 2685908a2d77b8ec05139b141d17c132 382 PRINTS PR00416 Eukaryotic DNA topoisomerase I signature 144 158 5.5E-8 T 12-10-2018 IPR001631 DNA topoisomerase I GO:0003677|GO:0003917|GO:0006265 JDM601_1881 2685908a2d77b8ec05139b141d17c132 382 Gene3D G3DSA:1.10.132.120 89 306 1.0E-61 T 12-10-2018 JDM601_1881 2685908a2d77b8ec05139b141d17c132 382 SUPERFAMILY SSF56349 77 303 5.3E-54 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 JDM601_3082 0a1575223ca7f239362117ccdaddd585 100 Gene3D G3DSA:3.30.750.24 1 94 6.0E-19 T 12-10-2018 IPR036513 STAS domain superfamily JDM601_3082 0a1575223ca7f239362117ccdaddd585 100 SUPERFAMILY SSF52091 1 93 1.86E-13 T 12-10-2018 IPR036513 STAS domain superfamily JDM601_3082 0a1575223ca7f239362117ccdaddd585 100 Pfam PF01740 STAS domain 2 89 7.8E-9 T 12-10-2018 IPR002645 STAS domain JDM601_0540 7d339341d105b8cc8cf7ac2989d746b1 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 99 110 2.0E-17 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0540 7d339341d105b8cc8cf7ac2989d746b1 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 194 2.0E-17 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0540 7d339341d105b8cc8cf7ac2989d746b1 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 25 42 2.0E-17 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0540 7d339341d105b8cc8cf7ac2989d746b1 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 148 164 2.0E-17 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0540 7d339341d105b8cc8cf7ac2989d746b1 272 Gene3D G3DSA:3.40.50.720 11 271 2.1E-58 T 12-10-2018 JDM601_0540 7d339341d105b8cc8cf7ac2989d746b1 272 Pfam PF00106 short chain dehydrogenase 24 217 3.2E-44 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0540 7d339341d105b8cc8cf7ac2989d746b1 272 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 175 194 8.4E-8 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0540 7d339341d105b8cc8cf7ac2989d746b1 272 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 99 110 8.4E-8 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0540 7d339341d105b8cc8cf7ac2989d746b1 272 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 162 8.4E-8 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0540 7d339341d105b8cc8cf7ac2989d746b1 272 SUPERFAMILY SSF51735 17 243 3.89E-56 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_3715 14a3575aa0653692fca63359acaf7311 266 SUPERFAMILY SSF51735 21 262 5.63E-69 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_3715 14a3575aa0653692fca63359acaf7311 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 100 111 1.6E-30 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3715 14a3575aa0653692fca63359acaf7311 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 148 164 1.6E-30 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3715 14a3575aa0653692fca63359acaf7311 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 229 249 1.6E-30 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3715 14a3575aa0653692fca63359acaf7311 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 195 212 1.6E-30 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3715 14a3575aa0653692fca63359acaf7311 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 193 1.6E-30 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3715 14a3575aa0653692fca63359acaf7311 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 25 42 1.6E-30 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3715 14a3575aa0653692fca63359acaf7311 266 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 30 261 2.8E-57 T 12-10-2018 JDM601_3715 14a3575aa0653692fca63359acaf7311 266 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 162 7.8E-12 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3715 14a3575aa0653692fca63359acaf7311 266 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 100 111 7.8E-12 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3715 14a3575aa0653692fca63359acaf7311 266 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 174 193 7.8E-12 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3715 14a3575aa0653692fca63359acaf7311 266 Gene3D G3DSA:3.40.50.720 4 262 1.7E-76 T 12-10-2018 JDM601_2148 581f71785beac8b32c7766ce3ca483e0 122 Gene3D G3DSA:2.30.110.10 18 114 2.8E-5 T 12-10-2018 IPR012349 FMN-binding split barrel GO:0048037 JDM601_2148 581f71785beac8b32c7766ce3ca483e0 122 TIGRFAM TIGR00026 hi_GC_TIGR00026: deazaflavin-dependent oxidoreductase, nitroreductase family 25 113 2.6E-17 T 12-10-2018 IPR004378 F420H(2)-dependent quinone reductase GO:0016491|GO:0055114 JDM601_0102 46adc33513ca3ec85cc94b80740fbf63 450 Gene3D G3DSA:3.30.43.10 1 92 4.8E-23 T 12-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 JDM601_0102 46adc33513ca3ec85cc94b80740fbf63 450 Pfam PF02913 FAD linked oxidases, C-terminal domain 216 445 3.1E-47 T 12-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 JDM601_0102 46adc33513ca3ec85cc94b80740fbf63 450 Pfam PF01565 FAD binding domain 42 176 8.4E-33 T 12-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 JDM601_0102 46adc33513ca3ec85cc94b80740fbf63 450 Gene3D G3DSA:1.10.45.10 409 444 4.4E-9 T 12-10-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 JDM601_0102 46adc33513ca3ec85cc94b80740fbf63 450 SUPERFAMILY SSF55103 190 448 5.56E-40 T 12-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 JDM601_0102 46adc33513ca3ec85cc94b80740fbf63 450 SUPERFAMILY SSF56176 4 216 9.54E-62 T 12-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 JDM601_0102 46adc33513ca3ec85cc94b80740fbf63 450 Gene3D G3DSA:3.30.465.10 94 215 1.6E-35 T 12-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 JDM601_0102 46adc33513ca3ec85cc94b80740fbf63 450 Gene3D G3DSA:3.30.70.2190 216 325 1.8E-6 T 12-10-2018 JDM601_0102 46adc33513ca3ec85cc94b80740fbf63 450 Gene3D G3DSA:3.30.70.2740 329 408 5.5E-18 T 12-10-2018 JDM601_1488 70c52ffaf01d719a665c92c5bdf3cf64 128 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 5 109 22.045 T 12-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS JDM601_1488 70c52ffaf01d719a665c92c5bdf3cf64 128 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 14 108 8.8E-31 T 12-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS JDM601_1488 70c52ffaf01d719a665c92c5bdf3cf64 128 Gene3D G3DSA:3.30.460.10 1 112 1.2E-40 T 12-10-2018 JDM601_1488 70c52ffaf01d719a665c92c5bdf3cf64 128 Pfam PF02410 Ribosomal silencing factor during starvation 17 108 7.7E-24 T 12-10-2018 JDM601_1488 70c52ffaf01d719a665c92c5bdf3cf64 128 SUPERFAMILY SSF81301 7 117 2.78E-37 T 12-10-2018 JDM601_3627 0002ba31fbd5ca08f01a3eaff57bd04a 444 Pfam PF11887 Cholesterol uptake porter CUP1 of Mce4, putative 137 282 1.8E-9 T 12-10-2018 IPR024516 Mammalian cell entry, C-terminal JDM601_3627 0002ba31fbd5ca08f01a3eaff57bd04a 444 TIGRFAM TIGR00996 Mtu_fam_mce: virulence factor Mce family protein 13 293 2.6E-73 T 12-10-2018 IPR005693 Virulence factor Mce protein JDM601_3627 0002ba31fbd5ca08f01a3eaff57bd04a 444 Pfam PF02470 MlaD protein 30 105 1.5E-13 T 12-10-2018 IPR003399 Mce/MlaD JDM601_2445 9d03a6bf4ba6a0000d529e180c8aae0a 360 SUPERFAMILY SSF53335 115 356 8.86E-51 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JDM601_2445 9d03a6bf4ba6a0000d529e180c8aae0a 360 Pfam PF16864 Dimerisation domain 34 105 2.0E-8 T 12-10-2018 IPR031725 Acetylserotonin O-methyltransferase, dimerisation domain JDM601_2445 9d03a6bf4ba6a0000d529e180c8aae0a 360 PIRSF PIRSF005739 19 359 6.7E-60 T 12-10-2018 IPR016461 O-methyltransferase COMT-type GO:0008168 JDM601_2445 9d03a6bf4ba6a0000d529e180c8aae0a 360 SUPERFAMILY SSF46785 34 114 4.51E-19 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JDM601_2445 9d03a6bf4ba6a0000d529e180c8aae0a 360 Pfam PF00891 O-methyltransferase 127 341 3.9E-54 T 12-10-2018 IPR001077 O-methyltransferase, family 2 GO:0008171 JDM601_2445 9d03a6bf4ba6a0000d529e180c8aae0a 360 Gene3D G3DSA:3.40.50.150 111 360 4.0E-77 T 12-10-2018 JDM601_2445 9d03a6bf4ba6a0000d529e180c8aae0a 360 Gene3D G3DSA:1.10.10.10 8 110 8.8E-24 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JDM601_2086 b64b47989d525440feea672b5897b516 294 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 86 289 8.2E-18 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 JDM601_2086 b64b47989d525440feea672b5897b516 294 Gene3D G3DSA:1.10.3720.10 48 292 3.3E-71 T 12-10-2018 IPR035906 MetI-like superfamily JDM601_2086 b64b47989d525440feea672b5897b516 294 SUPERFAMILY SSF161098 54 282 7.46E-63 T 12-10-2018 IPR035906 MetI-like superfamily JDM601_1223 dbd4396457f95dfcf1042b30caed0c23 403 Pfam PF00067 Cytochrome P450 274 372 7.9E-14 T 12-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_1223 dbd4396457f95dfcf1042b30caed0c23 403 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 345 354 - T 12-10-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 JDM601_1223 dbd4396457f95dfcf1042b30caed0c23 403 SUPERFAMILY SSF48264 13 400 1.02E-80 T 12-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_1223 dbd4396457f95dfcf1042b30caed0c23 403 PRINTS PR00359 B-class P450 signature 293 320 1.9E-42 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_1223 dbd4396457f95dfcf1042b30caed0c23 403 PRINTS PR00359 B-class P450 signature 193 215 1.9E-42 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_1223 dbd4396457f95dfcf1042b30caed0c23 403 PRINTS PR00359 B-class P450 signature 343 352 1.9E-42 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_1223 dbd4396457f95dfcf1042b30caed0c23 403 PRINTS PR00359 B-class P450 signature 276 287 1.9E-42 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_1223 dbd4396457f95dfcf1042b30caed0c23 403 PRINTS PR00359 B-class P450 signature 153 168 1.9E-42 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_1223 dbd4396457f95dfcf1042b30caed0c23 403 PRINTS PR00359 B-class P450 signature 90 101 1.9E-42 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_1223 dbd4396457f95dfcf1042b30caed0c23 403 PRINTS PR00359 B-class P450 signature 136 152 1.9E-42 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_1223 dbd4396457f95dfcf1042b30caed0c23 403 PRINTS PR00359 B-class P450 signature 352 363 1.9E-42 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_1223 dbd4396457f95dfcf1042b30caed0c23 403 Gene3D G3DSA:1.10.630.10 2 402 2.3E-114 T 12-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_1123 36a554c8986a90853371b42db8928bfd 250 Gene3D G3DSA:3.40.50.720 1 250 3.7E-71 T 12-10-2018 JDM601_1123 36a554c8986a90853371b42db8928bfd 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 4.1E-9 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_1123 36a554c8986a90853371b42db8928bfd 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 4.1E-9 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_1123 36a554c8986a90853371b42db8928bfd 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 74 85 4.1E-9 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_1123 36a554c8986a90853371b42db8928bfd 250 Pfam PF00106 short chain dehydrogenase 7 199 2.8E-41 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_1123 36a554c8986a90853371b42db8928bfd 250 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 143 171 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 JDM601_1123 36a554c8986a90853371b42db8928bfd 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 8.7E-27 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_1123 36a554c8986a90853371b42db8928bfd 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 8.7E-27 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_1123 36a554c8986a90853371b42db8928bfd 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 8.7E-27 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_1123 36a554c8986a90853371b42db8928bfd 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 74 85 8.7E-27 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_1123 36a554c8986a90853371b42db8928bfd 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 8.7E-27 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_1123 36a554c8986a90853371b42db8928bfd 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 211 231 8.7E-27 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_1123 36a554c8986a90853371b42db8928bfd 250 SUPERFAMILY SSF51735 7 246 3.82E-55 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_1423 599432ee6d4f81b986375af0c92a9b0a 482 SUPERFAMILY SSF52777 40 177 4.22E-11 T 12-10-2018 JDM601_1423 599432ee6d4f81b986375af0c92a9b0a 482 Pfam PF06974 Protein of unknown function (DUF1298) 321 459 1.5E-13 T 12-10-2018 IPR009721 O-acyltransferase WSD1, C-terminal GO:0004144 KEGG: 00073+2.3.1.20|KEGG: 00561+2.3.1.20 JDM601_1423 599432ee6d4f81b986375af0c92a9b0a 482 TIGRFAM TIGR02946 acyl_WS_DGAT: acyltransferase, WS/DGAT/MGAT 14 463 1.9E-110 T 12-10-2018 IPR014292 Acyltransferase, WS/DGAT/MGAT GO:0016746|GO:0045017 KEGG: 00073+2.3.1.20|KEGG: 00561+2.3.1.20 JDM601_1423 599432ee6d4f81b986375af0c92a9b0a 482 Pfam PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain 13 282 1.3E-73 T 12-10-2018 IPR004255 O-acyltransferase, WSD1, N-terminal GO:0004144|GO:0045017 KEGG: 00073+2.3.1.20|KEGG: 00561+2.3.1.20 JDM601_2310 7c9f690933fe692551eba16bc8e6f3de 277 Hamap MF_01215 Orotidine 5'-phosphate decarboxylase [pyrF]. 6 273 32.759 T 12-10-2018 IPR011995 Orotidine 5'-phosphate decarboxylase, type 2 GO:0004590|GO:0006221 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 JDM601_2310 7c9f690933fe692551eba16bc8e6f3de 277 Gene3D G3DSA:3.20.20.70 7 273 1.0E-82 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JDM601_2310 7c9f690933fe692551eba16bc8e6f3de 277 SMART SM00934 21 263 1.4E-32 T 12-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 JDM601_2310 7c9f690933fe692551eba16bc8e6f3de 277 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 94 107 - T 12-10-2018 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 JDM601_2310 7c9f690933fe692551eba16bc8e6f3de 277 SUPERFAMILY SSF51366 8 271 2.83E-60 T 12-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 JDM601_2310 7c9f690933fe692551eba16bc8e6f3de 277 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 21 261 3.3E-43 T 12-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 JDM601_2310 7c9f690933fe692551eba16bc8e6f3de 277 TIGRFAM TIGR02127 pyrF_sub2: orotidine 5'-phosphate decarboxylase 8 262 2.9E-82 T 12-10-2018 IPR011995 Orotidine 5'-phosphate decarboxylase, type 2 GO:0004590|GO:0006221 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 JDM601_4203 0f443821b87f6485238a260e4126c794 294 Pfam PF00106 short chain dehydrogenase 1 200 3.3E-24 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_4203 0f443821b87f6485238a260e4126c794 294 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 6.2E-5 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_4203 0f443821b87f6485238a260e4126c794 294 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 119 135 6.2E-5 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_4203 0f443821b87f6485238a260e4126c794 294 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 74 85 6.2E-5 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_4203 0f443821b87f6485238a260e4126c794 294 Gene3D G3DSA:3.40.50.720 1 289 2.9E-66 T 12-10-2018 JDM601_4203 0f443821b87f6485238a260e4126c794 294 SUPERFAMILY SSF51735 1 258 5.97E-44 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_2744 51ede6188525983ff9e51883d970dc85 277 SUPERFAMILY SSF55729 20 234 2.98E-44 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase JDM601_2744 51ede6188525983ff9e51883d970dc85 277 Pfam PF13444 Acetyltransferase (GNAT) domain 38 139 1.2E-31 T 12-10-2018 JDM601_2744 51ede6188525983ff9e51883d970dc85 277 Gene3D G3DSA:3.40.630.30 24 182 2.8E-28 T 12-10-2018 JDM601_1713 f383eb9787ad2307600cb5707e4d9956 347 Pfam PF00877 NlpC/P60 family 247 338 1.5E-24 T 12-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain JDM601_1713 f383eb9787ad2307600cb5707e4d9956 347 SUPERFAMILY SSF54001 234 346 6.38E-38 T 12-10-2018 IPR038765 Papain-like cysteine peptidase superfamily JDM601_1325 46b30aa2f2461c1010fd58cfbd8e153e 164 Gene3D G3DSA:3.10.180.10 17 156 7.4E-41 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase JDM601_1325 46b30aa2f2461c1010fd58cfbd8e153e 164 TIGRFAM TIGR03081 metmalonyl_epim: methylmalonyl-CoA epimerase 24 155 6.2E-41 T 12-10-2018 IPR017515 Methylmalonyl-CoA epimerase KEGG: 00280+5.1.99.1|KEGG: 00630+5.1.99.1|KEGG: 00640+5.1.99.1|KEGG: 00720+5.1.99.1|MetaCyc: PWY-5741|MetaCyc: PWY-5743|MetaCyc: PWY-5789|MetaCyc: PWY-6728|MetaCyc: PWY-7384|MetaCyc: PWY-7854|Reactome: R-HSA-71032 JDM601_1325 46b30aa2f2461c1010fd58cfbd8e153e 164 Pfam PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 25 140 2.7E-21 T 12-10-2018 JDM601_1325 46b30aa2f2461c1010fd58cfbd8e153e 164 SUPERFAMILY SSF54593 21 158 2.4E-33 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase JDM601_0771 33b0fd5855167597980358adbb363908 95 Pfam PF01527 Transposase 4 78 1.4E-15 T 12-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 JDM601_0771 33b0fd5855167597980358adbb363908 95 SUPERFAMILY SSF46689 5 76 1.0E-10 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JDM601_1315 33b0fd5855167597980358adbb363908 95 Pfam PF01527 Transposase 4 78 1.4E-15 T 12-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 JDM601_1315 33b0fd5855167597980358adbb363908 95 SUPERFAMILY SSF46689 5 76 1.0E-10 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JDM601_3770 33b0fd5855167597980358adbb363908 95 Pfam PF01527 Transposase 4 78 1.4E-15 T 12-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 JDM601_3770 33b0fd5855167597980358adbb363908 95 SUPERFAMILY SSF46689 5 76 1.0E-10 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JDM601_1371 33b0fd5855167597980358adbb363908 95 Pfam PF01527 Transposase 4 78 1.4E-15 T 12-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 JDM601_1371 33b0fd5855167597980358adbb363908 95 SUPERFAMILY SSF46689 5 76 1.0E-10 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JDM601_4009 6341226e3d0a7da48921cb4c32d0b131 436 PIRSF PIRSF003085 26 436 8.7E-122 T 12-10-2018 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 JDM601_4009 6341226e3d0a7da48921cb4c32d0b131 436 Pfam PF02353 Mycolic acid cyclopropane synthetase 147 414 3.3E-94 T 12-10-2018 JDM601_4009 6341226e3d0a7da48921cb4c32d0b131 436 SUPERFAMILY SSF53335 158 417 5.78E-68 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JDM601_4009 6341226e3d0a7da48921cb4c32d0b131 436 Gene3D G3DSA:3.40.50.150 156 422 1.7E-85 T 12-10-2018 JDM601_4009 6341226e3d0a7da48921cb4c32d0b131 436 SMART SM00828 Methyltransferase in polyketide synthase (PKS) enzymes. 166 417 0.0075 T 12-10-2018 IPR020803 Polyketide synthase, methyltransferase domain JDM601_0456 25a722539ffa7b4f6620c89a36e2c83a 272 SUPERFAMILY SSF54637 21 149 1.34E-19 T 12-10-2018 IPR029069 HotDog domain superfamily JDM601_0456 25a722539ffa7b4f6620c89a36e2c83a 272 Pfam PF01643 Acyl-ACP thioesterase 23 263 8.9E-59 T 12-10-2018 IPR002864 Acyl-ACP thioesterase GO:0006633|GO:0016790 JDM601_0456 25a722539ffa7b4f6620c89a36e2c83a 272 SUPERFAMILY SSF54637 165 238 1.61E-11 T 12-10-2018 IPR029069 HotDog domain superfamily JDM601_0456 25a722539ffa7b4f6620c89a36e2c83a 272 Gene3D G3DSA:3.10.129.10 19 256 7.1E-34 T 12-10-2018 JDM601_2283 dc453b90c38462d733dff698ff90f043 164 Pfam PF10756 Bacterial PH domain 74 143 2.2E-23 T 12-10-2018 IPR019692 Protein of unknown function DUF2581 JDM601_0507 e967c47291dac990b7bba41b62ffdd28 277 SMART SM01004 1 276 2.1E-151 T 12-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 JDM601_0507 e967c47291dac990b7bba41b62ffdd28 277 Pfam PF00490 Delta-aminolevulinic acid dehydratase 1 275 7.9E-115 T 12-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 JDM601_0507 e967c47291dac990b7bba41b62ffdd28 277 Gene3D G3DSA:3.20.20.70 1 277 2.3E-116 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JDM601_0507 e967c47291dac990b7bba41b62ffdd28 277 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 195 207 - T 12-10-2018 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 JDM601_0507 e967c47291dac990b7bba41b62ffdd28 277 SUPERFAMILY SSF51569 1 276 4.54E-108 T 12-10-2018 JDM601_0507 e967c47291dac990b7bba41b62ffdd28 277 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 144 163 3.0E-59 T 12-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 JDM601_0507 e967c47291dac990b7bba41b62ffdd28 277 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 75 89 3.0E-59 T 12-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 JDM601_0507 e967c47291dac990b7bba41b62ffdd28 277 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 106 125 3.0E-59 T 12-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 JDM601_0507 e967c47291dac990b7bba41b62ffdd28 277 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 250 269 3.0E-59 T 12-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 JDM601_0507 e967c47291dac990b7bba41b62ffdd28 277 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 195 211 3.0E-59 T 12-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 JDM601_0507 e967c47291dac990b7bba41b62ffdd28 277 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 220 235 3.0E-59 T 12-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 JDM601_3996 87d38e01fcdeb2eb8cad4b8f36a9ecf9 233 SUPERFAMILY SSF52317 13 208 2.21E-20 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like JDM601_3996 87d38e01fcdeb2eb8cad4b8f36a9ecf9 233 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 2 196 5.1E-37 T 12-10-2018 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 JDM601_3996 87d38e01fcdeb2eb8cad4b8f36a9ecf9 233 Gene3D G3DSA:3.40.50.880 11 209 1.6E-8 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like JDM601_1624 9909d54fe08be829527ce6a8f772e6ad 523 Pfam PF13193 AMP-binding enzyme C-terminal domain 430 510 2.2E-7 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain JDM601_1624 9909d54fe08be829527ce6a8f772e6ad 523 Gene3D G3DSA:3.40.50.12780 5 414 5.0E-88 T 12-10-2018 JDM601_1624 9909d54fe08be829527ce6a8f772e6ad 523 Pfam PF00501 AMP-binding enzyme 33 418 7.4E-69 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 JDM601_1624 9909d54fe08be829527ce6a8f772e6ad 523 Gene3D G3DSA:3.30.300.310 416 522 2.3E-22 T 12-10-2018 JDM601_1624 9909d54fe08be829527ce6a8f772e6ad 523 SUPERFAMILY SSF56801 22 519 9.42E-111 T 12-10-2018 JDM601_2190 b48b4c7ab59edafa2216f445bd215693 1048 Hamap MF_02003 Isoleucine--tRNA ligase [ileS]. 8 1044 13.741 T 12-10-2018 IPR023586 Isoleucine-tRNA ligase, type 2 GO:0004822 KEGG: 00970+6.1.1.5|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 JDM601_2190 b48b4c7ab59edafa2216f445bd215693 1048 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 15 856 1.0E-238 T 12-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 JDM601_2190 b48b4c7ab59edafa2216f445bd215693 1048 SUPERFAMILY SSF50677 210 390 1.57E-47 T 12-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 JDM601_2190 b48b4c7ab59edafa2216f445bd215693 1048 SUPERFAMILY SSF52374 12 657 9.21E-127 T 12-10-2018 JDM601_2190 b48b4c7ab59edafa2216f445bd215693 1048 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 53 64 - T 12-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 JDM601_2190 b48b4c7ab59edafa2216f445bd215693 1048 Gene3D G3DSA:1.10.730.10 668 838 6.9E-40 T 12-10-2018 JDM601_2190 b48b4c7ab59edafa2216f445bd215693 1048 SUPERFAMILY SSF47323 680 904 1.18E-44 T 12-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 JDM601_2190 b48b4c7ab59edafa2216f445bd215693 1048 Pfam PF08264 Anticodon-binding domain of tRNA 707 844 2.7E-24 T 12-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 JDM601_2190 b48b4c7ab59edafa2216f445bd215693 1048 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 23 659 1.6E-178 T 12-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 JDM601_2190 b48b4c7ab59edafa2216f445bd215693 1048 Gene3D G3DSA:3.40.50.620 21 651 1.7E-225 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JDM601_2190 b48b4c7ab59edafa2216f445bd215693 1048 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 46 57 3.6E-29 T 12-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 JDM601_2190 b48b4c7ab59edafa2216f445bd215693 1048 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 409 424 3.6E-29 T 12-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 JDM601_2190 b48b4c7ab59edafa2216f445bd215693 1048 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 235 258 3.6E-29 T 12-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 JDM601_2190 b48b4c7ab59edafa2216f445bd215693 1048 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 538 551 3.6E-29 T 12-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 JDM601_2190 b48b4c7ab59edafa2216f445bd215693 1048 Gene3D G3DSA:3.90.740.10 202 415 1.7E-225 T 12-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 JDM601_1356 521d49f12c140ed72d95b00242b5b596 329 Pfam PF01844 HNH endonuclease 258 311 1.9E-10 T 12-10-2018 IPR002711 HNH endonuclease GO:0003676|GO:0004519 JDM601_1356 521d49f12c140ed72d95b00242b5b596 329 SMART SM00507 245 307 0.0021 T 12-10-2018 IPR003615 HNH nuclease JDM601_2147 c6d4f7226e2fc802761d14a0a290f5b7 449 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 42 446 2.9E-136 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 JDM601_2147 c6d4f7226e2fc802761d14a0a290f5b7 449 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 14 447 38.205 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 JDM601_2147 c6d4f7226e2fc802761d14a0a290f5b7 449 Gene3D G3DSA:3.40.50.1980 252 369 2.0E-106 T 12-10-2018 JDM601_2147 c6d4f7226e2fc802761d14a0a290f5b7 449 Gene3D G3DSA:3.40.50.1980 41 250 2.0E-106 T 12-10-2018 JDM601_2147 c6d4f7226e2fc802761d14a0a290f5b7 449 Pfam PF00815 Histidinol dehydrogenase 30 447 4.6E-152 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 JDM601_2147 c6d4f7226e2fc802761d14a0a290f5b7 449 PIRSF PIRSF000099 8 449 2.3E-146 T 12-10-2018 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 JDM601_2147 c6d4f7226e2fc802761d14a0a290f5b7 449 SUPERFAMILY SSF53720 34 447 2.75E-65 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 JDM601_2147 c6d4f7226e2fc802761d14a0a290f5b7 449 PRINTS PR00083 Histidinol dehydrogenase signature 270 289 2.9E-70 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 JDM601_2147 c6d4f7226e2fc802761d14a0a290f5b7 449 PRINTS PR00083 Histidinol dehydrogenase signature 42 66 2.9E-70 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 JDM601_2147 c6d4f7226e2fc802761d14a0a290f5b7 449 PRINTS PR00083 Histidinol dehydrogenase signature 381 399 2.9E-70 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 JDM601_2147 c6d4f7226e2fc802761d14a0a290f5b7 449 PRINTS PR00083 Histidinol dehydrogenase signature 184 210 2.9E-70 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 JDM601_2147 c6d4f7226e2fc802761d14a0a290f5b7 449 PRINTS PR00083 Histidinol dehydrogenase signature 340 365 2.9E-70 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 JDM601_2147 c6d4f7226e2fc802761d14a0a290f5b7 449 PRINTS PR00083 Histidinol dehydrogenase signature 248 269 2.9E-70 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 JDM601_2147 c6d4f7226e2fc802761d14a0a290f5b7 449 PRINTS PR00083 Histidinol dehydrogenase signature 219 244 2.9E-70 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 JDM601_2147 c6d4f7226e2fc802761d14a0a290f5b7 449 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 248 280 - T 12-10-2018 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23 JDM601_1039 3e442838ef2c209d6e0cd23963cfe6cc 424 Gene3D G3DSA:3.40.640.10 34 275 7.2E-171 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 JDM601_1039 3e442838ef2c209d6e0cd23963cfe6cc 424 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 219 235 - T 12-10-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 JDM601_1039 3e442838ef2c209d6e0cd23963cfe6cc 424 Gene3D G3DSA:3.90.1150.10 9 413 7.2E-171 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 JDM601_1039 3e442838ef2c209d6e0cd23963cfe6cc 424 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 4 416 48.241 T 12-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 JDM601_1039 3e442838ef2c209d6e0cd23963cfe6cc 424 PIRSF PIRSF000412 1 420 7.0E-146 T 12-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 JDM601_1039 3e442838ef2c209d6e0cd23963cfe6cc 424 SUPERFAMILY SSF53383 3 416 4.7E-163 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase JDM601_1039 3e442838ef2c209d6e0cd23963cfe6cc 424 Pfam PF00464 Serine hydroxymethyltransferase 6 386 3.4E-156 T 12-10-2018 IPR039429 Serine hydroxymethyltransferase-like domain KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 JDM601_0872 d2714bffae5cb7bfb870aea06fc825de 142 SUPERFAMILY SSF55961 3 137 7.99E-33 T 12-10-2018 JDM601_0872 d2714bffae5cb7bfb870aea06fc825de 142 Pfam PF10604 Polyketide cyclase / dehydrase and lipid transport 4 137 6.2E-20 T 12-10-2018 IPR019587 Polyketide cyclase/dehydrase JDM601_0872 d2714bffae5cb7bfb870aea06fc825de 142 Gene3D G3DSA:3.30.530.20 1 138 8.0E-38 T 12-10-2018 IPR023393 START-like domain superfamily JDM601_2963 80ef39e9d873f26facfe3d76911dc9b7 430 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 16 424 3.2E-106 T 12-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 JDM601_2963 80ef39e9d873f26facfe3d76911dc9b7 430 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 11 425 29.089 T 12-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 JDM601_2963 80ef39e9d873f26facfe3d76911dc9b7 430 SUPERFAMILY SSF55205 10 421 2.88E-96 T 12-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 JDM601_2963 80ef39e9d873f26facfe3d76911dc9b7 430 Gene3D G3DSA:3.65.10.10 23 241 2.0E-144 T 12-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 JDM601_2963 80ef39e9d873f26facfe3d76911dc9b7 430 ProSitePatterns PS00885 EPSP synthase signature 2. 338 356 - T 12-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 JDM601_2963 80ef39e9d873f26facfe3d76911dc9b7 430 ProSitePatterns PS00104 EPSP synthase signature 1. 90 104 - T 12-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 JDM601_2963 80ef39e9d873f26facfe3d76911dc9b7 430 Gene3D G3DSA:3.65.10.10 15 415 2.0E-144 T 12-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 JDM601_2963 80ef39e9d873f26facfe3d76911dc9b7 430 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 9 417 8.7E-114 T 12-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 JDM601_2963 80ef39e9d873f26facfe3d76911dc9b7 430 PIRSF PIRSF000505 1 428 5.9E-116 T 12-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 JDM601_0085 4075e6a743a895eb6034e4ae7ddfe62a 277 SUPERFAMILY SSF52096 6 251 1.52E-41 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily JDM601_0085 4075e6a743a895eb6034e4ae7ddfe62a 277 Pfam PF00378 Enoyl-CoA hydratase/isomerase 26 189 4.4E-18 T 12-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 JDM601_0085 4075e6a743a895eb6034e4ae7ddfe62a 277 Gene3D G3DSA:3.90.226.10 2 275 4.9E-59 T 12-10-2018 JDM601_2577 84eab8ba1273489c4f7be5da9f546931 455 Pfam PF02720 Domain of unknown function (DUF222) 37 358 3.1E-79 T 12-10-2018 IPR003870 Domain of unknown function DUF222 JDM601_2577 84eab8ba1273489c4f7be5da9f546931 455 ProDom PD008243 RV1792C/MT1741/MB1728C RV1945/MT1995 MB1980 MB0098C RV3466/MT3572 VERY RV1128C/MT1160 RV1148C/MT1183 MB1159C RV0095C 1 91 3.0E-20 T 12-10-2018 JDM601_1259 6e1af56f797c95b7f4fb0796f50d09f2 49 SUPERFAMILY SSF50118 2 40 7.63E-5 T 12-10-2018 JDM601_3323 6451a89fe4cbd07d73b8dbcc09f70ef7 285 SUPERFAMILY SSF56436 4 285 6.36E-84 T 12-10-2018 IPR016187 C-type lectin fold JDM601_3323 6451a89fe4cbd07d73b8dbcc09f70ef7 285 Gene3D G3DSA:3.90.1580.10 1 285 2.3E-99 T 12-10-2018 JDM601_3323 6451a89fe4cbd07d73b8dbcc09f70ef7 285 Pfam PF03781 Sulfatase-modifying factor enzyme 1 2 284 2.0E-85 T 12-10-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 JDM601_0736 751cf05e3efe3ac505fb980dd237df09 404 SUPERFAMILY SSF89796 3 399 1.7E-115 T 12-10-2018 IPR023606 CoA-transferase family III domain superfamily JDM601_0736 751cf05e3efe3ac505fb980dd237df09 404 Pfam PF02515 CoA-transferase family III 5 376 2.3E-110 T 12-10-2018 IPR003673 CoA-transferase family III GO:0003824 JDM601_0736 751cf05e3efe3ac505fb980dd237df09 404 Gene3D G3DSA:3.40.50.10540 4 393 4.3E-111 T 12-10-2018 IPR023606 CoA-transferase family III domain superfamily JDM601_0736 751cf05e3efe3ac505fb980dd237df09 404 Gene3D G3DSA:3.30.1540.10 236 329 4.3E-111 T 12-10-2018 JDM601_4164 c49d5645258526deb39dd4e956231377 170 Pfam PF04234 CopC domain 20 112 4.5E-21 T 12-10-2018 IPR007348 CopC domain GO:0005507|GO:0042597|GO:0046688 JDM601_4164 c49d5645258526deb39dd4e956231377 170 SUPERFAMILY SSF81296 19 112 1.33E-22 T 12-10-2018 IPR014756 Immunoglobulin E-set JDM601_4164 c49d5645258526deb39dd4e956231377 170 Gene3D G3DSA:2.60.40.1220 20 118 8.0E-23 T 12-10-2018 JDM601_1176 ea9c72d43b211b704c4a1e493830a1e4 934 SUPERFAMILY SSF82866 682 908 3.27E-31 T 12-10-2018 JDM601_1176 ea9c72d43b211b704c4a1e493830a1e4 934 TIGRFAM TIGR00833 actII: transport protein 2 908 1.2E-290 T 12-10-2018 IPR004707 Membrane transport protein MmpL family GO:0016021 JDM601_1176 ea9c72d43b211b704c4a1e493830a1e4 934 Gene3D G3DSA:1.20.1640.10 148 334 1.8E-6 T 12-10-2018 JDM601_1176 ea9c72d43b211b704c4a1e493830a1e4 934 Pfam PF03176 MMPL family 584 917 1.7E-95 T 12-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 JDM601_1176 ea9c72d43b211b704c4a1e493830a1e4 934 Pfam PF03176 MMPL family 31 360 7.7E-109 T 12-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 JDM601_1176 ea9c72d43b211b704c4a1e493830a1e4 934 SUPERFAMILY SSF82866 116 331 4.32E-27 T 12-10-2018 JDM601_3645 ddb8307dd174e846c6c5f1a6113737b3 227 Gene3D G3DSA:3.40.710.10 1 215 1.7E-15 T 12-10-2018 JDM601_3645 ddb8307dd174e846c6c5f1a6113737b3 227 SUPERFAMILY SSF56601 4 211 1.32E-11 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like JDM601_2548 02c1d3c27004a344ec51506485b388d8 325 Pfam PF10974 Protein of unknown function (DUF2804) 21 322 3.6E-85 T 12-10-2018 IPR021243 Protein of unknown function DUF2804 JDM601_0737 442012038d213983a4a200d062b45904 262 SUPERFAMILY SSF52096 4 257 7.62E-75 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily JDM601_0737 442012038d213983a4a200d062b45904 262 Gene3D G3DSA:3.90.226.10 2 200 9.4E-57 T 12-10-2018 JDM601_0737 442012038d213983a4a200d062b45904 262 Pfam PF00378 Enoyl-CoA hydratase/isomerase 14 257 9.4E-44 T 12-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 JDM601_0737 442012038d213983a4a200d062b45904 262 Gene3D G3DSA:1.10.12.10 201 257 1.5E-15 T 12-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal JDM601_0737 442012038d213983a4a200d062b45904 262 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 99 119 - T 12-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 JDM601_2922 969c32c2c0d73eca5aca6a94530bef16 344 Pfam PF11350 Protein of unknown function (DUF3152) 130 342 5.5E-98 T 12-10-2018 IPR022603 Domain of unknown function DUF3152 JDM601_2922 969c32c2c0d73eca5aca6a94530bef16 344 SMART SM00235 150 328 2.3E-4 T 12-10-2018 IPR006026 Peptidase, metallopeptidase GO:0006508|GO:0008237|GO:0008270 JDM601_2922 969c32c2c0d73eca5aca6a94530bef16 344 Gene3D G3DSA:3.40.390.10 162 326 1.3E-5 T 12-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 JDM601_2922 969c32c2c0d73eca5aca6a94530bef16 344 SUPERFAMILY SSF55486 125 317 3.79E-19 T 12-10-2018 JDM601_0195 f36c1db060e0ddecf332d8f991ef51d3 256 Pfam PF08241 Methyltransferase domain 63 156 3.2E-18 T 12-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 JDM601_0195 f36c1db060e0ddecf332d8f991ef51d3 256 SUPERFAMILY SSF53335 43 217 9.45E-30 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JDM601_0195 f36c1db060e0ddecf332d8f991ef51d3 256 Gene3D G3DSA:3.40.50.150 22 231 1.7E-27 T 12-10-2018 JDM601_0835 ff69a3108fe534d5b8dd436278785828 353 Gene3D G3DSA:3.40.630.100 165 327 1.1E-23 T 12-10-2018 IPR038128 Poly-gamma-glutamate hydrolase superfamily JDM601_0835 ff69a3108fe534d5b8dd436278785828 353 Pfam PF05908 Poly-gamma-glutamate hydrolase 166 320 5.6E-38 T 12-10-2018 IPR008585 Poly-gamma-glutamate hydrolase JDM601_0835 ff69a3108fe534d5b8dd436278785828 353 Gene3D G3DSA:3.10.490.10 2 145 1.3E-42 T 12-10-2018 JDM601_0835 ff69a3108fe534d5b8dd436278785828 353 Pfam PF06094 Gamma-glutamyl cyclotransferase, AIG2-like 8 105 7.8E-13 T 12-10-2018 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like JDM601_0835 ff69a3108fe534d5b8dd436278785828 353 SUPERFAMILY SSF110857 5 122 6.02E-22 T 12-10-2018 IPR036568 Gamma-glutamyl cyclotransferase-like superfamily JDM601_3994 fcb1f262bb1c227a581b58c880879061 329 Gene3D G3DSA:3.40.50.10190 228 308 3.6E-7 T 12-10-2018 IPR036420 BRCT domain superfamily JDM601_3994 fcb1f262bb1c227a581b58c880879061 329 SUPERFAMILY SSF52113 229 303 2.05E-7 T 12-10-2018 IPR036420 BRCT domain superfamily JDM601_3994 fcb1f262bb1c227a581b58c880879061 329 Gene3D G3DSA:3.30.420.10 12 180 1.2E-39 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 JDM601_3994 fcb1f262bb1c227a581b58c880879061 329 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 15 176 2.3E-21 T 12-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 JDM601_3994 fcb1f262bb1c227a581b58c880879061 329 SUPERFAMILY SSF53098 16 192 3.24E-44 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily JDM601_3994 fcb1f262bb1c227a581b58c880879061 329 SMART SM00479 15 180 2.4E-40 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III JDM601_3994 fcb1f262bb1c227a581b58c880879061 329 Pfam PF00929 Exonuclease 17 170 4.0E-23 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III JDM601_3216 8e0b4e0977edafc965405dd200171b58 529 Pfam PF00817 impB/mucB/samB family 22 150 8.0E-12 T 12-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 JDM601_3216 8e0b4e0977edafc965405dd200171b58 529 Gene3D G3DSA:1.10.150.20 167 226 1.6E-12 T 12-10-2018 JDM601_3216 8e0b4e0977edafc965405dd200171b58 529 SUPERFAMILY SSF56672 6 231 6.05E-33 T 12-10-2018 JDM601_3216 8e0b4e0977edafc965405dd200171b58 529 Gene3D G3DSA:3.30.70.270 72 229 1.6E-12 T 12-10-2018 JDM601_3216 8e0b4e0977edafc965405dd200171b58 529 Gene3D G3DSA:2.30.40.20 37 71 1.6E-12 T 12-10-2018 JDM601_4248 9fc4dcf35680e7a8d59ab4c1cd090c88 319 Pfam PF00970 Oxidoreductase FAD-binding domain 10 83 2.2E-6 T 12-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 JDM601_4248 9fc4dcf35680e7a8d59ab4c1cd090c88 319 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 268 276 - T 12-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 JDM601_4248 9fc4dcf35680e7a8d59ab4c1cd090c88 319 SUPERFAMILY SSF54292 199 318 2.75E-25 T 12-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 JDM601_4248 9fc4dcf35680e7a8d59ab4c1cd090c88 319 Pfam PF00175 Oxidoreductase NAD-binding domain 96 191 1.0E-11 T 12-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 JDM601_4248 9fc4dcf35680e7a8d59ab4c1cd090c88 319 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 117 126 5.8E-6 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 JDM601_4248 9fc4dcf35680e7a8d59ab4c1cd090c88 319 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 34 41 5.8E-6 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 JDM601_4248 9fc4dcf35680e7a8d59ab4c1cd090c88 319 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 93 112 5.8E-6 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 JDM601_4248 9fc4dcf35680e7a8d59ab4c1cd090c88 319 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 14 24 5.8E-6 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 JDM601_4248 9fc4dcf35680e7a8d59ab4c1cd090c88 319 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 236 310 5.9E-15 T 12-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 JDM601_4248 9fc4dcf35680e7a8d59ab4c1cd090c88 319 SUPERFAMILY SSF52343 74 207 1.96E-29 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain JDM601_4248 9fc4dcf35680e7a8d59ab4c1cd090c88 319 SUPERFAMILY SSF63380 5 83 1.04E-16 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel JDM601_4248 9fc4dcf35680e7a8d59ab4c1cd090c88 319 Gene3D G3DSA:2.40.30.10 1 84 2.8E-17 T 12-10-2018 JDM601_4248 9fc4dcf35680e7a8d59ab4c1cd090c88 319 Gene3D G3DSA:3.40.50.80 85 213 4.1E-27 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain JDM601_4248 9fc4dcf35680e7a8d59ab4c1cd090c88 319 PRINTS PR00409 Phthalate dioxygenase reductase family signature 57 71 2.1E-8 T 12-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 JDM601_4248 9fc4dcf35680e7a8d59ab4c1cd090c88 319 PRINTS PR00409 Phthalate dioxygenase reductase family signature 93 112 2.1E-8 T 12-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 JDM601_4248 9fc4dcf35680e7a8d59ab4c1cd090c88 319 PRINTS PR00409 Phthalate dioxygenase reductase family signature 177 185 2.1E-8 T 12-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 JDM601_4248 9fc4dcf35680e7a8d59ab4c1cd090c88 319 PRINTS PR00409 Phthalate dioxygenase reductase family signature 71 85 2.1E-8 T 12-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 JDM601_4248 9fc4dcf35680e7a8d59ab4c1cd090c88 319 Gene3D G3DSA:3.10.20.30 217 319 2.0E-25 T 12-10-2018 IPR012675 Beta-grasp domain superfamily JDM601_2584 164762b0529e69e4585cf04aaf2ca8e2 285 Hamap MF_01974 Methionine aminopeptidase [map]. 39 285 40.583 T 12-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 JDM601_2584 164762b0529e69e4585cf04aaf2ca8e2 285 SUPERFAMILY SSF55920 5 284 1.44E-89 T 12-10-2018 IPR036005 Creatinase/aminopeptidase-like JDM601_2584 164762b0529e69e4585cf04aaf2ca8e2 285 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 202 220 - T 12-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 JDM601_2584 164762b0529e69e4585cf04aaf2ca8e2 285 PRINTS PR00599 Methionine aminopeptidase-1 signature 126 142 9.5E-23 T 12-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 JDM601_2584 164762b0529e69e4585cf04aaf2ca8e2 285 PRINTS PR00599 Methionine aminopeptidase-1 signature 104 117 9.5E-23 T 12-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 JDM601_2584 164762b0529e69e4585cf04aaf2ca8e2 285 PRINTS PR00599 Methionine aminopeptidase-1 signature 227 239 9.5E-23 T 12-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 JDM601_2584 164762b0529e69e4585cf04aaf2ca8e2 285 PRINTS PR00599 Methionine aminopeptidase-1 signature 196 208 9.5E-23 T 12-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 JDM601_2584 164762b0529e69e4585cf04aaf2ca8e2 285 Gene3D G3DSA:3.90.230.10 4 285 8.0E-115 T 12-10-2018 JDM601_2584 164762b0529e69e4585cf04aaf2ca8e2 285 Pfam PF00557 Metallopeptidase family M24 48 276 4.4E-52 T 12-10-2018 IPR000994 Peptidase M24 JDM601_2584 164762b0529e69e4585cf04aaf2ca8e2 285 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 42 283 9.2E-92 T 12-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 JDM601_3221 1a6a63539d69a7298b8a523400f4cf98 556 SUPERFAMILY SSF51905 2 514 2.67E-35 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_3221 1a6a63539d69a7298b8a523400f4cf98 556 Pfam PF05199 GMC oxidoreductase 451 508 3.4E-11 T 12-10-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 JDM601_3221 1a6a63539d69a7298b8a523400f4cf98 556 Gene3D G3DSA:3.50.50.60 168 342 2.6E-26 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_3221 1a6a63539d69a7298b8a523400f4cf98 556 Gene3D G3DSA:3.50.50.60 422 514 2.7E-17 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_3221 1a6a63539d69a7298b8a523400f4cf98 556 Gene3D G3DSA:3.50.50.60 1 131 2.6E-16 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_1473 cc5f8932e85b783db1031cd72fe6ec15 407 Pfam PF00083 Sugar (and other) transporter 246 393 2.2E-15 T 12-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 JDM601_1473 cc5f8932e85b783db1031cd72fe6ec15 407 Gene3D G3DSA:1.20.1250.20 218 400 9.1E-24 T 12-10-2018 JDM601_1473 cc5f8932e85b783db1031cd72fe6ec15 407 Gene3D G3DSA:1.20.1250.20 11 217 6.7E-41 T 12-10-2018 JDM601_1473 cc5f8932e85b783db1031cd72fe6ec15 407 SUPERFAMILY SSF103473 7 403 1.57E-69 T 12-10-2018 IPR036259 MFS transporter superfamily JDM601_1473 cc5f8932e85b783db1031cd72fe6ec15 407 Pfam PF07690 Major Facilitator Superfamily 22 243 7.5E-27 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 JDM601_1473 cc5f8932e85b783db1031cd72fe6ec15 407 ProSitePatterns PS00217 Sugar transport proteins signature 2. 108 133 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 JDM601_4265 dfa0654c006f3b1828242bb3d8cff1fc 168 SUPERFAMILY SSF54427 5 145 9.99E-17 T 12-10-2018 IPR032710 NTF2-like domain superfamily JDM601_4265 dfa0654c006f3b1828242bb3d8cff1fc 168 Gene3D G3DSA:3.10.450.50 9 149 2.6E-9 T 12-10-2018 JDM601_4265 dfa0654c006f3b1828242bb3d8cff1fc 168 Pfam PF13577 SnoaL-like domain 10 108 1.4E-5 T 12-10-2018 IPR037401 SnoaL-like domain JDM601_1022 4bd102b8ccccc00e36114f620d61ad33 348 SUPERFAMILY SSF53474 65 345 5.59E-49 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_1022 4bd102b8ccccc00e36114f620d61ad33 348 Pfam PF07859 alpha/beta hydrolase fold 119 323 1.4E-44 T 12-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 JDM601_1022 4bd102b8ccccc00e36114f620d61ad33 348 Gene3D G3DSA:3.40.50.1820 77 347 5.0E-63 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_0038 16ae4d63c223a7faf917f85695c0029f 138 Pfam PF02467 Transcription factor WhiB 12 83 8.2E-13 T 12-10-2018 IPR034768 WhiB-like iron-sulfur binding domain JDM601_0038 16ae4d63c223a7faf917f85695c0029f 138 Hamap MF_01479 Transcriptional regulator WhiB [whiB]. 1 88 15.577 T 12-10-2018 IPR003482 Transcription factor WhiB JDM601_2261 24ea6eaaf37212993346a62c2a576cb4 328 Gene3D G3DSA:3.90.180.10 9 325 4.0E-115 T 12-10-2018 JDM601_2261 24ea6eaaf37212993346a62c2a576cb4 328 SMART SM00829 10 326 2.9E-24 T 12-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 JDM601_2261 24ea6eaaf37212993346a62c2a576cb4 328 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 107 2.1E-12 T 12-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 JDM601_2261 24ea6eaaf37212993346a62c2a576cb4 328 Gene3D G3DSA:3.40.50.720 121 272 4.0E-115 T 12-10-2018 JDM601_2261 24ea6eaaf37212993346a62c2a576cb4 328 SUPERFAMILY SSF51735 110 272 4.45E-38 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_2261 24ea6eaaf37212993346a62c2a576cb4 328 Pfam PF00107 Zinc-binding dehydrogenase 149 257 5.3E-24 T 12-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 JDM601_2261 24ea6eaaf37212993346a62c2a576cb4 328 SUPERFAMILY SSF50129 7 139 3.3E-36 T 12-10-2018 IPR011032 GroES-like superfamily JDM601_3962 24047fa8b3c29f20f4ff00887ba19570 321 SUPERFAMILY SSF56300 47 290 4.95E-28 T 12-10-2018 JDM601_3962 24047fa8b3c29f20f4ff00887ba19570 321 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 54 235 2.4E-9 T 12-10-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 JDM601_3962 24047fa8b3c29f20f4ff00887ba19570 321 Gene3D G3DSA:3.60.21.10 51 261 3.3E-12 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like JDM601_1394 c612e32cf17c2e4531878f8e992d1fa7 218 Gene3D G3DSA:3.30.420.10 2 183 1.0E-67 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 JDM601_1394 c612e32cf17c2e4531878f8e992d1fa7 218 Pfam PF00929 Exonuclease 9 172 2.5E-30 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III JDM601_1394 c612e32cf17c2e4531878f8e992d1fa7 218 SMART SM00479 7 182 7.4E-30 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III JDM601_1394 c612e32cf17c2e4531878f8e992d1fa7 218 SUPERFAMILY SSF53098 6 180 7.59E-43 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily JDM601_1394 c612e32cf17c2e4531878f8e992d1fa7 218 Hamap MF_00045 Oligoribonuclease [orn]. 3 183 37.894 T 12-10-2018 IPR022894 Oligoribonuclease GO:0000175 JDM601_1452 2ece470a38cfb4916ba579a745adecba 616 SUPERFAMILY SSF52518 209 469 7.85E-61 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold JDM601_1452 2ece470a38cfb4916ba579a745adecba 616 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 238 446 2.6E-57 T 12-10-2018 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 JDM601_1452 2ece470a38cfb4916ba579a745adecba 616 Gene3D G3DSA:3.40.50.970 199 404 7.8E-65 T 12-10-2018 JDM601_1452 2ece470a38cfb4916ba579a745adecba 616 SUPERFAMILY SSF52922 485 587 6.75E-15 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 JDM601_1452 2ece470a38cfb4916ba579a745adecba 616 SUPERFAMILY SSF53323 12 200 7.45E-15 T 12-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 JDM601_1452 2ece470a38cfb4916ba579a745adecba 616 TIGRFAM TIGR03710 OAFO_sf: 2-oxoacid:acceptor oxidoreductase, alpha subunit 1 578 5.9E-189 T 12-10-2018 IPR022367 2-oxoacid:acceptor oxidoreductase, alpha subunit KEGG: 00020+1.2.7.3|KEGG: 00720+1.2.7.3|MetaCyc: PWY-5392|MetaCyc: PWY-6969 JDM601_1452 2ece470a38cfb4916ba579a745adecba 616 Gene3D G3DSA:3.40.920.10 1 198 1.1E-11 T 12-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 JDM601_1452 2ece470a38cfb4916ba579a745adecba 616 Pfam PF17147 Pyruvate:ferredoxin oxidoreductase core domain II 486 564 1.7E-6 T 12-10-2018 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II JDM601_1452 2ece470a38cfb4916ba579a745adecba 616 Gene3D G3DSA:3.40.50.920 481 585 9.0E-20 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 JDM601_1452 2ece470a38cfb4916ba579a745adecba 616 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 3 185 1.5E-24 T 12-10-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 JDM601_1951 75eaecb0a859853ddb83b41a8d10df2a 240 Pfam PF02517 CAAX protease self-immunity 114 226 2.4E-11 T 12-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 JDM601_1951 75eaecb0a859853ddb83b41a8d10df2a 240 PIRSF PIRSF026622 5 240 5.9E-104 T 12-10-2018 IPR015837 Uncharacterised conserved protein UCP026622, CAAX protease-type JDM601_1944 4fdc9a7180afffed9d560b500698b7cf 223 Gene3D G3DSA:3.40.50.720 3 221 3.6E-27 T 12-10-2018 JDM601_1944 4fdc9a7180afffed9d560b500698b7cf 223 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 217 1.6E-16 T 12-10-2018 JDM601_1944 4fdc9a7180afffed9d560b500698b7cf 223 SUPERFAMILY SSF51735 3 220 2.29E-30 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_1944 4fdc9a7180afffed9d560b500698b7cf 223 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 2 19 3.6E-5 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_1944 4fdc9a7180afffed9d560b500698b7cf 223 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 182 202 3.6E-5 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_1944 4fdc9a7180afffed9d560b500698b7cf 223 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 161 178 3.6E-5 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0717 ec7c8dc007d110ed8f310091650b9b85 76 SUPERFAMILY SSF47598 5 56 3.84E-9 T 12-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 JDM601_1643 19bc7c6ac01f6fd1b8f68c8c39b87e2d 192 SUPERFAMILY SSF46689 13 71 6.98E-13 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JDM601_1643 19bc7c6ac01f6fd1b8f68c8c39b87e2d 192 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 2.7E-5 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_1643 19bc7c6ac01f6fd1b8f68c8c39b87e2d 192 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 2.7E-5 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_1643 19bc7c6ac01f6fd1b8f68c8c39b87e2d 192 Gene3D G3DSA:1.10.357.10 5 184 9.2E-20 T 12-10-2018 JDM601_1643 19bc7c6ac01f6fd1b8f68c8c39b87e2d 192 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 54 4.3E-11 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_3488 f9488dfef134e2b0b1a15816a88662c8 130 Gene3D G3DSA:2.102.10.10 15 130 4.1E-30 T 12-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 JDM601_3488 f9488dfef134e2b0b1a15816a88662c8 130 SUPERFAMILY SSF50022 16 129 2.23E-26 T 12-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 JDM601_3488 f9488dfef134e2b0b1a15816a88662c8 130 Pfam PF00355 Rieske [2Fe-2S] domain 17 111 1.9E-10 T 12-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 JDM601_3375 aa2251a4ccaebead930bbe83c2825288 402 SUPERFAMILY SSF53901 252 391 1.28E-19 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 JDM601_3375 aa2251a4ccaebead930bbe83c2825288 402 SUPERFAMILY SSF53901 5 245 2.39E-13 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 JDM601_3375 aa2251a4ccaebead930bbe83c2825288 402 Gene3D G3DSA:3.40.47.10 1 401 3.3E-89 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 JDM601_3375 aa2251a4ccaebead930bbe83c2825288 402 PIRSF PIRSF000429 3 393 4.9E-13 T 12-10-2018 IPR002155 Thiolase GO:0016747 JDM601_3093 dacd720527e2cb446767c8410806db44 494 SUPERFAMILY SSF56524 315 489 8.11E-47 T 12-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 JDM601_3093 dacd720527e2cb446767c8410806db44 494 Gene3D G3DSA:1.20.950.20 71 222 8.2E-9 T 12-10-2018 JDM601_3093 dacd720527e2cb446767c8410806db44 494 Pfam PF00174 Oxidoreductase molybdopterin binding domain 324 470 1.2E-31 T 12-10-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 JDM601_3093 dacd720527e2cb446767c8410806db44 494 Gene3D G3DSA:3.90.420.10 302 493 1.4E-49 T 12-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 JDM601_3093 dacd720527e2cb446767c8410806db44 494 SUPERFAMILY SSF81342 4 238 4.32E-18 T 12-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 JDM601_3093 dacd720527e2cb446767c8410806db44 494 Pfam PF01292 Prokaryotic cytochrome b561 4 230 1.4E-37 T 12-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 JDM601_1405 2a6166d2e377d89f67782ecd5191c560 386 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 128 140 - T 12-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 JDM601_1405 2a6166d2e377d89f67782ecd5191c560 386 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 126 223 1.3E-21 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 JDM601_1405 2a6166d2e377d89f67782ecd5191c560 386 Gene3D G3DSA:1.10.540.10 2 124 4.7E-40 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 JDM601_1405 2a6166d2e377d89f67782ecd5191c560 386 SUPERFAMILY SSF47203 234 384 2.74E-49 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 JDM601_1405 2a6166d2e377d89f67782ecd5191c560 386 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 343 362 - T 12-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 JDM601_1405 2a6166d2e377d89f67782ecd5191c560 386 SUPERFAMILY SSF56645 8 249 1.44E-76 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 JDM601_1405 2a6166d2e377d89f67782ecd5191c560 386 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 11 121 1.4E-34 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 JDM601_1405 2a6166d2e377d89f67782ecd5191c560 386 Gene3D G3DSA:1.20.140.10 243 386 1.5E-49 T 12-10-2018 JDM601_1405 2a6166d2e377d89f67782ecd5191c560 386 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 236 384 4.1E-48 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 JDM601_1405 2a6166d2e377d89f67782ecd5191c560 386 PIRSF PIRSF016578 5 385 1.6E-12 T 12-10-2018 JDM601_1405 2a6166d2e377d89f67782ecd5191c560 386 Gene3D G3DSA:2.40.110.10 126 242 1.7E-35 T 12-10-2018 JDM601_0992 32ee94a93ca93f4d648616773e77c1a0 150 Gene3D G3DSA:2.60.40.1240 28 150 8.4E-31 T 12-10-2018 IPR029050 Immunoprotective extracellular, immunoglobulin-like domain superfamily JDM601_0992 32ee94a93ca93f4d648616773e77c1a0 150 SUPERFAMILY SSF81982 29 149 4.18E-36 T 12-10-2018 JDM601_0992 32ee94a93ca93f4d648616773e77c1a0 150 ProDom PD886639 ANTIGEN IMMUNOGENIC EXTRACELLULAR MPT63 MPB63 PRECURSOR IMMUNOPROTECTIVE SIGNAL SEQUENCING DIRECT 36 149 1.0E-46 T 12-10-2018 IPR015250 MPT63-like GO:0005615 JDM601_0992 32ee94a93ca93f4d648616773e77c1a0 150 Pfam PF09167 Domain of unknown function (DUF1942) 31 148 1.9E-37 T 12-10-2018 IPR015250 MPT63-like GO:0005615 JDM601_1593 f4c8d6392b50c0c10ab088791f2dfd7e 455 Pfam PF01523 Putative modulator of DNA gyrase 24 318 5.8E-29 T 12-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 JDM601_1593 f4c8d6392b50c0c10ab088791f2dfd7e 455 SUPERFAMILY SSF111283 5 448 3.53E-57 T 12-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 JDM601_3393 709f39faf6f814991bc2303b7b4295b1 265 Gene3D G3DSA:3.40.50.720 2 264 2.0E-60 T 12-10-2018 JDM601_3393 709f39faf6f814991bc2303b7b4295b1 265 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 17 261 1.3E-46 T 12-10-2018 JDM601_3393 709f39faf6f814991bc2303b7b4295b1 265 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 8 178 0.0029 T 12-10-2018 JDM601_3393 709f39faf6f814991bc2303b7b4295b1 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 85 96 5.0E-24 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3393 709f39faf6f814991bc2303b7b4295b1 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 5.0E-24 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3393 709f39faf6f814991bc2303b7b4295b1 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 5.0E-24 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3393 709f39faf6f814991bc2303b7b4295b1 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 226 246 5.0E-24 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3393 709f39faf6f814991bc2303b7b4295b1 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 5.0E-24 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3393 709f39faf6f814991bc2303b7b4295b1 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 5.0E-24 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3393 709f39faf6f814991bc2303b7b4295b1 265 SUPERFAMILY SSF51735 8 261 1.67E-60 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_3693 935d83c3785c491336f54b025006a777 414 SUPERFAMILY SSF48264 51 408 4.32E-76 T 12-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_3693 935d83c3785c491336f54b025006a777 414 PRINTS PR00359 B-class P450 signature 206 228 1.2E-43 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3693 935d83c3785c491336f54b025006a777 414 PRINTS PR00359 B-class P450 signature 149 165 1.2E-43 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3693 935d83c3785c491336f54b025006a777 414 PRINTS PR00359 B-class P450 signature 361 372 1.2E-43 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3693 935d83c3785c491336f54b025006a777 414 PRINTS PR00359 B-class P450 signature 330 345 1.2E-43 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3693 935d83c3785c491336f54b025006a777 414 PRINTS PR00359 B-class P450 signature 285 296 1.2E-43 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3693 935d83c3785c491336f54b025006a777 414 PRINTS PR00359 B-class P450 signature 166 181 1.2E-43 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3693 935d83c3785c491336f54b025006a777 414 PRINTS PR00359 B-class P450 signature 352 361 1.2E-43 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3693 935d83c3785c491336f54b025006a777 414 PRINTS PR00359 B-class P450 signature 103 114 1.2E-43 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3693 935d83c3785c491336f54b025006a777 414 PRINTS PR00359 B-class P450 signature 302 329 1.2E-43 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3693 935d83c3785c491336f54b025006a777 414 Pfam PF00067 Cytochrome P450 221 377 3.8E-15 T 12-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_3693 935d83c3785c491336f54b025006a777 414 Gene3D G3DSA:1.10.630.10 2 414 6.6E-118 T 12-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_1768 7f2240a302b8aab6ccab3669e2ac7997 228 Gene3D G3DSA:3.40.50.1240 1 210 8.1E-46 T 12-10-2018 IPR029033 Histidine phosphatase superfamily JDM601_1768 7f2240a302b8aab6ccab3669e2ac7997 228 TIGRFAM TIGR03848 MSMEG_4193: probable phosphomutase, MSMEG_4193 family 2 204 1.7E-97 T 12-10-2018 IPR022492 Phosphomutase MSMEG4193, putative JDM601_1768 7f2240a302b8aab6ccab3669e2ac7997 228 SMART SM00855 2 160 4.5E-18 T 12-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 JDM601_1768 7f2240a302b8aab6ccab3669e2ac7997 228 SUPERFAMILY SSF53254 1 200 3.21E-43 T 12-10-2018 IPR029033 Histidine phosphatase superfamily JDM601_1768 7f2240a302b8aab6ccab3669e2ac7997 228 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 199 2.6E-46 T 12-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 JDM601_0840 baf08a33ed9afbf5da2e0995117fd412 176 Gene3D G3DSA:1.10.10.10 2 162 8.1E-51 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JDM601_0840 baf08a33ed9afbf5da2e0995117fd412 176 Pfam PF01638 HxlR-like helix-turn-helix 19 106 1.2E-22 T 12-10-2018 IPR002577 Helix-turn-helix, HxlR type JDM601_0840 baf08a33ed9afbf5da2e0995117fd412 176 SUPERFAMILY SSF46785 5 143 1.08E-40 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JDM601_3995 be01122c9626e628fb2cb32101baf4a9 408 Pfam PF08245 Mur ligase middle domain 56 183 2.6E-16 T 12-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 JDM601_3995 be01122c9626e628fb2cb32101baf4a9 408 Pfam PF08353 Domain of unknown function (DUF1727) 299 398 3.2E-23 T 12-10-2018 IPR013564 Domain of unknown function DUF1727 JDM601_3995 be01122c9626e628fb2cb32101baf4a9 408 SUPERFAMILY SSF53623 43 277 5.23E-34 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 JDM601_3995 be01122c9626e628fb2cb32101baf4a9 408 Gene3D G3DSA:3.40.1190.10 43 281 4.3E-34 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 JDM601_0610 9a53231cdcc768d19c88988525a1c407 1332 ProSitePatterns PS00892 HIT domain signature. 84 102 - T 12-10-2018 IPR019808 Histidine triad, conserved site JDM601_0610 9a53231cdcc768d19c88988525a1c407 1332 Pfam PF11907 Domain of unknown function (DUF3427) 1187 1317 2.9E-13 T 12-10-2018 IPR021835 Protein of unknown function DUF3427 JDM601_0610 9a53231cdcc768d19c88988525a1c407 1332 Pfam PF13091 PLD-like domain 167 293 2.3E-12 T 12-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 JDM601_0610 9a53231cdcc768d19c88988525a1c407 1332 SUPERFAMILY SSF54197 4 112 9.9E-30 T 12-10-2018 IPR036265 HIT-like superfamily JDM601_0610 9a53231cdcc768d19c88988525a1c407 1332 Gene3D G3DSA:3.40.50.300 318 491 1.8E-42 T 12-10-2018 JDM601_0610 9a53231cdcc768d19c88988525a1c407 1332 Pfam PF01230 HIT domain 18 105 4.8E-19 T 12-10-2018 IPR001310 Histidine triad (HIT) protein JDM601_0610 9a53231cdcc768d19c88988525a1c407 1332 Pfam PF04851 Type III restriction enzyme, res subunit 331 477 2.4E-31 T 12-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 JDM601_0610 9a53231cdcc768d19c88988525a1c407 1332 SUPERFAMILY SSF56024 176 298 1.08E-8 T 12-10-2018 JDM601_0610 9a53231cdcc768d19c88988525a1c407 1332 SMART SM00487 328 504 8.7E-18 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain JDM601_0610 9a53231cdcc768d19c88988525a1c407 1332 Gene3D G3DSA:3.40.50.300 527 676 3.9E-33 T 12-10-2018 JDM601_0610 9a53231cdcc768d19c88988525a1c407 1332 SMART SM00490 571 652 1.4E-10 T 12-10-2018 IPR001650 Helicase, C-terminal JDM601_0610 9a53231cdcc768d19c88988525a1c407 1332 Gene3D G3DSA:3.30.870.10 145 309 3.8E-28 T 12-10-2018 JDM601_0610 9a53231cdcc768d19c88988525a1c407 1332 SUPERFAMILY SSF51306 1079 1175 7.85E-6 T 12-10-2018 IPR036286 LexA/Signal peptidase-like superfamily JDM601_0610 9a53231cdcc768d19c88988525a1c407 1332 SUPERFAMILY SSF52540 378 667 5.33E-44 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_0610 9a53231cdcc768d19c88988525a1c407 1332 Pfam PF00271 Helicase conserved C-terminal domain 554 650 3.7E-12 T 12-10-2018 IPR001650 Helicase, C-terminal JDM601_0610 9a53231cdcc768d19c88988525a1c407 1332 Gene3D G3DSA:3.30.428.10 1 120 1.1E-31 T 12-10-2018 IPR036265 HIT-like superfamily JDM601_1773 13297121b5ca02fdbc3a7625a2043507 291 SUPERFAMILY SSF51735 4 252 6.99E-62 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_1773 13297121b5ca02fdbc3a7625a2043507 291 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 7.3E-7 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_1773 13297121b5ca02fdbc3a7625a2043507 291 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 7.3E-7 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_1773 13297121b5ca02fdbc3a7625a2043507 291 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 7.3E-7 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_1773 13297121b5ca02fdbc3a7625a2043507 291 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 187 5.1E-5 T 12-10-2018 JDM601_1773 13297121b5ca02fdbc3a7625a2043507 291 Gene3D G3DSA:3.40.50.720 2 256 1.3E-64 T 12-10-2018 JDM601_1773 13297121b5ca02fdbc3a7625a2043507 291 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 7.7E-19 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_1773 13297121b5ca02fdbc3a7625a2043507 291 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 7.7E-19 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_1773 13297121b5ca02fdbc3a7625a2043507 291 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 7.7E-19 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_1773 13297121b5ca02fdbc3a7625a2043507 291 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 7.7E-19 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_1773 13297121b5ca02fdbc3a7625a2043507 291 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 7.7E-19 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_1773 13297121b5ca02fdbc3a7625a2043507 291 Pfam PF00106 short chain dehydrogenase 7 196 6.7E-48 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2352 398f96b60f8f38d154c9a47d2752cf95 279 Pfam PF11296 Protein of unknown function (DUF3097) 4 277 9.9E-125 T 12-10-2018 IPR021447 Protein of unknown function DUF3097 JDM601_3195 037a90e96646de4b1cf049e1cec3716f 399 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 7 248 1.9E-40 T 12-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 JDM601_3195 037a90e96646de4b1cf049e1cec3716f 399 SUPERFAMILY SSF51395 5 386 1.31E-88 T 12-10-2018 JDM601_3195 037a90e96646de4b1cf049e1cec3716f 399 Gene3D G3DSA:3.20.20.70 5 398 8.3E-93 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JDM601_2423 9d1b1975a92a70aee37211567b33dc28 453 Gene3D G3DSA:1.10.3110.10 104 197 1.2E-100 T 12-10-2018 JDM601_2423 9d1b1975a92a70aee37211567b33dc28 453 Pfam PF01593 Flavin containing amine oxidoreductase 12 447 2.1E-31 T 12-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 JDM601_2423 9d1b1975a92a70aee37211567b33dc28 453 Gene3D G3DSA:3.90.660.20 38 399 1.2E-100 T 12-10-2018 JDM601_2423 9d1b1975a92a70aee37211567b33dc28 453 Gene3D G3DSA:3.50.50.60 7 439 1.2E-100 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_2423 9d1b1975a92a70aee37211567b33dc28 453 TIGRFAM TIGR00562 proto_IX_ox: protoporphyrinogen oxidase 6 446 4.5E-40 T 12-10-2018 IPR004572 Protoporphyrinogen oxidase GO:0004729|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.4|MetaCyc: PWY-7159|Reactome: R-HSA-189451 JDM601_2423 9d1b1975a92a70aee37211567b33dc28 453 SUPERFAMILY SSF51905 6 446 5.44E-36 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_2423 9d1b1975a92a70aee37211567b33dc28 453 SUPERFAMILY SSF54373 296 400 8.44E-20 T 12-10-2018 JDM601_1672 b13fe39e4152dbe4ac3efe1e8770f825 218 SUPERFAMILY SSF53335 5 180 3.35E-35 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JDM601_1672 b13fe39e4152dbe4ac3efe1e8770f825 218 Pfam PF13649 Methyltransferase domain 44 137 3.9E-16 T 12-10-2018 JDM601_1672 b13fe39e4152dbe4ac3efe1e8770f825 218 Gene3D G3DSA:3.40.50.150 11 203 8.9E-40 T 12-10-2018 JDM601_2342 2d81fe716b5f6fedb6daf42d94403feb 134 SUPERFAMILY SSF111038 3 130 1.57E-32 T 12-10-2018 IPR035917 YjbQ-like superfamily JDM601_2342 2d81fe716b5f6fedb6daf42d94403feb 134 TIGRFAM TIGR00149 TIGR00149_YjbQ: secondary thiamine-phosphate synthase enzyme 9 127 8.2E-20 T 12-10-2018 IPR001602 Uncharacterised protein family UPF0047 JDM601_2342 2d81fe716b5f6fedb6daf42d94403feb 134 Gene3D G3DSA:2.60.120.460 2 130 2.6E-30 T 12-10-2018 IPR035917 YjbQ-like superfamily JDM601_2342 2d81fe716b5f6fedb6daf42d94403feb 134 PIRSF PIRSF004681 1 133 4.4E-32 T 12-10-2018 IPR001602 Uncharacterised protein family UPF0047 JDM601_2342 2d81fe716b5f6fedb6daf42d94403feb 134 Pfam PF01894 Uncharacterised protein family UPF0047 17 128 3.3E-25 T 12-10-2018 IPR001602 Uncharacterised protein family UPF0047 JDM601_1406 1a7b4b81a929de25a9a2f48fd8ea89c5 162 Gene3D G3DSA:3.10.129.10 2 157 7.9E-50 T 12-10-2018 JDM601_1406 1a7b4b81a929de25a9a2f48fd8ea89c5 162 Pfam PF01575 MaoC like domain 16 135 3.0E-28 T 12-10-2018 IPR002539 MaoC-like dehydratase domain JDM601_1406 1a7b4b81a929de25a9a2f48fd8ea89c5 162 SUPERFAMILY SSF54637 5 157 1.17E-46 T 12-10-2018 IPR029069 HotDog domain superfamily JDM601_2815 d79aa6007adc56ccc17c5e660f5f40ce 122 Pfam PF04343 Protein of unknown function, DUF488 9 119 7.1E-27 T 12-10-2018 IPR007438 Protein of unknown function DUF488 JDM601_1167 c400ce040784830321294447ecc08ccf 395 Gene3D G3DSA:1.20.1260.20 1 174 1.2E-64 T 12-10-2018 IPR038332 PPE superfamily JDM601_1167 c400ce040784830321294447ecc08ccf 395 Pfam PF00823 PPE family 5 161 4.0E-58 T 12-10-2018 IPR000030 PPE family JDM601_1167 c400ce040784830321294447ecc08ccf 395 Pfam PF12484 Polymorphic PE/PPE proteins C terminal 312 391 2.6E-16 T 12-10-2018 IPR022171 PPE family, C-terminal JDM601_1167 c400ce040784830321294447ecc08ccf 395 SUPERFAMILY SSF140459 2 174 2.22E-59 T 12-10-2018 JDM601_1550 c21009cabab090cea0b99b359c3e430f 382 SUPERFAMILY SSF49493 260 346 7.72E-20 T 12-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 JDM601_1550 c21009cabab090cea0b99b359c3e430f 382 SUPERFAMILY SSF49493 111 263 7.19E-16 T 12-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 JDM601_1550 c21009cabab090cea0b99b359c3e430f 382 Pfam PF00684 DnaJ central domain 144 208 6.5E-13 T 12-10-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 JDM601_1550 c21009cabab090cea0b99b359c3e430f 382 Gene3D G3DSA:2.60.260.20 114 250 5.1E-31 T 12-10-2018 JDM601_1550 c21009cabab090cea0b99b359c3e430f 382 Gene3D G3DSA:1.10.287.110 1 110 1.1E-30 T 12-10-2018 IPR036869 Chaperone J-domain superfamily JDM601_1550 c21009cabab090cea0b99b359c3e430f 382 PRINTS PR00625 DnaJ domain signature 6 24 3.1E-23 T 12-10-2018 IPR001623 DnaJ domain JDM601_1550 c21009cabab090cea0b99b359c3e430f 382 PRINTS PR00625 DnaJ domain signature 40 60 3.1E-23 T 12-10-2018 IPR001623 DnaJ domain JDM601_1550 c21009cabab090cea0b99b359c3e430f 382 PRINTS PR00625 DnaJ domain signature 60 79 3.1E-23 T 12-10-2018 IPR001623 DnaJ domain JDM601_1550 c21009cabab090cea0b99b359c3e430f 382 PRINTS PR00625 DnaJ domain signature 24 39 3.1E-23 T 12-10-2018 IPR001623 DnaJ domain JDM601_1550 c21009cabab090cea0b99b359c3e430f 382 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 1 378 36.564 T 12-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 JDM601_1550 c21009cabab090cea0b99b359c3e430f 382 Pfam PF00226 DnaJ domain 4 65 4.1E-24 T 12-10-2018 IPR001623 DnaJ domain JDM601_1550 c21009cabab090cea0b99b359c3e430f 382 SUPERFAMILY SSF46565 3 102 1.14E-31 T 12-10-2018 IPR036869 Chaperone J-domain superfamily JDM601_1550 c21009cabab090cea0b99b359c3e430f 382 SUPERFAMILY SSF57938 131 211 3.4E-18 T 12-10-2018 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily JDM601_1550 c21009cabab090cea0b99b359c3e430f 382 Gene3D G3DSA:2.60.260.20 255 368 1.0E-28 T 12-10-2018 JDM601_1550 c21009cabab090cea0b99b359c3e430f 382 Pfam PF01556 DnaJ C terminal domain 120 335 7.4E-36 T 12-10-2018 IPR002939 Chaperone DnaJ, C-terminal JDM601_1550 c21009cabab090cea0b99b359c3e430f 382 SMART SM00271 3 60 1.8E-29 T 12-10-2018 IPR001623 DnaJ domain JDM601_1550 c21009cabab090cea0b99b359c3e430f 382 Gene3D G3DSA:2.10.230.10 144 208 5.1E-31 T 12-10-2018 JDM601_1827 57a7038dec2d9c3ba3379084d56cedc1 350 Pfam PF01409 tRNA synthetases class II core domain (F) 104 343 4.7E-97 T 12-10-2018 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 JDM601_1827 57a7038dec2d9c3ba3379084d56cedc1 350 SUPERFAMILY SSF46589 28 110 1.2E-14 T 12-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 JDM601_1827 57a7038dec2d9c3ba3379084d56cedc1 350 Gene3D G3DSA:3.30.930.10 20 348 6.0E-104 T 12-10-2018 JDM601_1827 57a7038dec2d9c3ba3379084d56cedc1 350 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 20 346 44.032 T 12-10-2018 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 JDM601_1827 57a7038dec2d9c3ba3379084d56cedc1 350 SUPERFAMILY SSF55681 104 342 1.33E-74 T 12-10-2018 JDM601_1827 57a7038dec2d9c3ba3379084d56cedc1 350 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 55 342 2.7E-85 T 12-10-2018 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 JDM601_1827 57a7038dec2d9c3ba3379084d56cedc1 350 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 32 99 1.8E-15 T 12-10-2018 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 JDM601_0898 fa5dfa26d6c13a13e2c4266b4cdfae33 300 Pfam PF02629 CoA binding domain 6 108 2.5E-24 T 12-10-2018 IPR003781 CoA-binding GO:0048037 JDM601_0898 fa5dfa26d6c13a13e2c4266b4cdfae33 300 PRINTS PR01798 Succinyl-CoA synthase signature 249 266 3.5E-34 T 12-10-2018 JDM601_0898 fa5dfa26d6c13a13e2c4266b4cdfae33 300 PRINTS PR01798 Succinyl-CoA synthase signature 186 204 3.5E-34 T 12-10-2018 JDM601_0898 fa5dfa26d6c13a13e2c4266b4cdfae33 300 PRINTS PR01798 Succinyl-CoA synthase signature 217 230 3.5E-34 T 12-10-2018 JDM601_0898 fa5dfa26d6c13a13e2c4266b4cdfae33 300 PRINTS PR01798 Succinyl-CoA synthase signature 91 108 3.5E-34 T 12-10-2018 JDM601_0898 fa5dfa26d6c13a13e2c4266b4cdfae33 300 Gene3D G3DSA:3.40.50.261 135 298 3.1E-60 T 12-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 JDM601_0898 fa5dfa26d6c13a13e2c4266b4cdfae33 300 Hamap MF_01988 Succinate--CoA ligase [ADP-forming] subunit alpha [sucD]. 1 297 38.603 T 12-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 JDM601_0898 fa5dfa26d6c13a13e2c4266b4cdfae33 300 Gene3D G3DSA:3.40.50.720 1 134 2.5E-44 T 12-10-2018 JDM601_0898 fa5dfa26d6c13a13e2c4266b4cdfae33 300 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 245 258 - T 12-10-2018 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site JDM601_0898 fa5dfa26d6c13a13e2c4266b4cdfae33 300 Pfam PF00549 CoA-ligase 163 280 8.1E-15 T 12-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 JDM601_0898 fa5dfa26d6c13a13e2c4266b4cdfae33 300 PIRSF PIRSF001553 1 300 1.3E-116 T 12-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 JDM601_0898 fa5dfa26d6c13a13e2c4266b4cdfae33 300 SMART SM00881 4 109 6.0E-25 T 12-10-2018 IPR003781 CoA-binding GO:0048037 JDM601_0898 fa5dfa26d6c13a13e2c4266b4cdfae33 300 SUPERFAMILY SSF52210 134 295 5.1E-46 T 12-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 JDM601_0898 fa5dfa26d6c13a13e2c4266b4cdfae33 300 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 163 190 - T 12-10-2018 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site JDM601_0898 fa5dfa26d6c13a13e2c4266b4cdfae33 300 SUPERFAMILY SSF51735 1 133 3.25E-32 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_0898 fa5dfa26d6c13a13e2c4266b4cdfae33 300 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 3 297 1.5E-129 T 12-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 JDM601_1421 56d6c9fe565c68524589a9948db81d07 252 Pfam PF00378 Enoyl-CoA hydratase/isomerase 13 219 1.8E-45 T 12-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 JDM601_1421 56d6c9fe565c68524589a9948db81d07 252 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 97 117 - T 12-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 JDM601_1421 56d6c9fe565c68524589a9948db81d07 252 Gene3D G3DSA:3.90.226.10 4 243 3.7E-61 T 12-10-2018 JDM601_1421 56d6c9fe565c68524589a9948db81d07 252 SUPERFAMILY SSF52096 2 221 4.66E-59 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily JDM601_3460 7aad180e6e22e4288851a863b2b1c110 233 Gene3D G3DSA:3.30.450.40 84 163 2.1E-10 T 12-10-2018 IPR029016 GAF-like domain superfamily JDM601_3460 7aad180e6e22e4288851a863b2b1c110 233 SUPERFAMILY SSF46785 17 86 7.69E-12 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JDM601_3460 7aad180e6e22e4288851a863b2b1c110 233 SMART SM00346 16 103 3.1E-16 T 12-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 JDM601_3460 7aad180e6e22e4288851a863b2b1c110 233 SUPERFAMILY SSF55781 88 232 1.11E-23 T 12-10-2018 JDM601_3460 7aad180e6e22e4288851a863b2b1c110 233 Pfam PF09339 IclR helix-turn-helix domain 18 66 1.6E-11 T 12-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 JDM601_3460 7aad180e6e22e4288851a863b2b1c110 233 Gene3D G3DSA:1.10.10.10 12 83 2.6E-14 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JDM601_3460 7aad180e6e22e4288851a863b2b1c110 233 Gene3D G3DSA:3.30.450.40 164 232 7.2E-8 T 12-10-2018 IPR029016 GAF-like domain superfamily JDM601_3597 0a3fbe2d657ed32fd0c3f82fbf13ddc5 142 SUPERFAMILY SSF69118 3 112 2.3E-17 T 12-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 JDM601_3597 0a3fbe2d657ed32fd0c3f82fbf13ddc5 142 Gene3D G3DSA:1.20.1290.10 3 121 2.1E-18 T 12-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 JDM601_3597 0a3fbe2d657ed32fd0c3f82fbf13ddc5 142 Pfam PF02627 Carboxymuconolactone decarboxylase family 28 101 1.7E-6 T 12-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 JDM601_1639 48d571e1d7a78a83d9e6d91eeb0c7d2a 275 Pfam PF00144 Beta-lactamase 36 265 2.2E-32 T 12-10-2018 IPR001466 Beta-lactamase-related JDM601_1639 48d571e1d7a78a83d9e6d91eeb0c7d2a 275 SUPERFAMILY SSF56601 6 268 1.22E-52 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like JDM601_1639 48d571e1d7a78a83d9e6d91eeb0c7d2a 275 Gene3D G3DSA:3.40.710.10 2 274 4.3E-79 T 12-10-2018 JDM601_3178 58ec32898a963466daa475995c77f4d5 483 Hamap MF_00028 Cobyric acid synthase [cobQ]. 1 470 171.522 T 12-10-2018 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 JDM601_3178 58ec32898a963466daa475995c77f4d5 483 SUPERFAMILY SSF52540 1 240 1.31E-52 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_3178 58ec32898a963466daa475995c77f4d5 483 SUPERFAMILY SSF52317 195 389 1.04E-34 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like JDM601_3178 58ec32898a963466daa475995c77f4d5 483 TIGRFAM TIGR00313 cobQ: cobyric acid synthase CobQ 5 462 1.4E-127 T 12-10-2018 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 JDM601_3178 58ec32898a963466daa475995c77f4d5 483 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 255 420 6.2E-43 T 12-10-2018 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 JDM601_3178 58ec32898a963466daa475995c77f4d5 483 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 4 233 9.0E-24 T 12-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain JDM601_3178 58ec32898a963466daa475995c77f4d5 483 Gene3D G3DSA:3.40.50.880 253 386 2.7E-22 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like JDM601_3178 58ec32898a963466daa475995c77f4d5 483 Gene3D G3DSA:3.40.50.300 3 241 1.9E-51 T 12-10-2018 JDM601_2753 1ccceaa93cff05e165ea915f5132de64 332 Pfam PF07859 alpha/beta hydrolase fold 104 308 8.9E-53 T 12-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 JDM601_2753 1ccceaa93cff05e165ea915f5132de64 332 SUPERFAMILY SSF53474 50 329 8.55E-54 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_2753 1ccceaa93cff05e165ea915f5132de64 332 Gene3D G3DSA:3.40.50.1820 21 332 5.5E-73 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_2674 7b7dd13485c7444ccaf027d82b2e9531 275 ProSitePatterns PS00063 Aldo/keto reductase family putative active site signature. 226 241 - T 12-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 JDM601_2674 7b7dd13485c7444ccaf027d82b2e9531 275 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 122 139 - T 12-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 JDM601_2674 7b7dd13485c7444ccaf027d82b2e9531 275 PIRSF PIRSF000097 1 269 1.7E-82 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 JDM601_2674 7b7dd13485c7444ccaf027d82b2e9531 275 SUPERFAMILY SSF51430 4 264 7.99E-91 T 12-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily JDM601_2674 7b7dd13485c7444ccaf027d82b2e9531 275 Pfam PF00248 Aldo/keto reductase family 21 258 1.5E-43 T 12-10-2018 IPR023210 NADP-dependent oxidoreductase domain JDM601_2674 7b7dd13485c7444ccaf027d82b2e9531 275 PRINTS PR00069 Aldo-keto reductase signature 193 217 1.8E-45 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 JDM601_2674 7b7dd13485c7444ccaf027d82b2e9531 275 PRINTS PR00069 Aldo-keto reductase signature 122 139 1.8E-45 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 JDM601_2674 7b7dd13485c7444ccaf027d82b2e9531 275 PRINTS PR00069 Aldo-keto reductase signature 156 185 1.8E-45 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 JDM601_2674 7b7dd13485c7444ccaf027d82b2e9531 275 PRINTS PR00069 Aldo-keto reductase signature 34 58 1.8E-45 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 JDM601_2674 7b7dd13485c7444ccaf027d82b2e9531 275 PRINTS PR00069 Aldo-keto reductase signature 90 108 1.8E-45 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 JDM601_2674 7b7dd13485c7444ccaf027d82b2e9531 275 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 38 55 - T 12-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 JDM601_2674 7b7dd13485c7444ccaf027d82b2e9531 275 Gene3D G3DSA:3.20.20.100 1 273 1.1E-111 T 12-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily JDM601_2759 e95c6f7522630d0ea1eb06fcbc89542e 424 SUPERFAMILY SSF50998 24 416 1.62E-12 T 12-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily JDM601_2759 e95c6f7522630d0ea1eb06fcbc89542e 424 Gene3D G3DSA:2.130.10.10 31 229 1.7E-7 T 12-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 JDM601_2759 e95c6f7522630d0ea1eb06fcbc89542e 424 Gene3D G3DSA:2.130.10.10 232 423 1.5E-15 T 12-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 JDM601_2759 e95c6f7522630d0ea1eb06fcbc89542e 424 Pfam PF13360 PQQ-like domain 254 395 5.1E-9 T 12-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat JDM601_3955 5fd78438e44c72f429577239d67eab33 259 Gene3D G3DSA:1.10.10.10 196 259 6.0E-10 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JDM601_3955 5fd78438e44c72f429577239d67eab33 259 Pfam PF00753 Metallo-beta-lactamase superfamily 31 98 3.4E-8 T 12-10-2018 IPR001279 Metallo-beta-lactamase JDM601_3955 5fd78438e44c72f429577239d67eab33 259 SUPERFAMILY SSF56281 12 257 1.54E-46 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like JDM601_3955 5fd78438e44c72f429577239d67eab33 259 SMART SM00849 33 188 1.2E-27 T 12-10-2018 IPR001279 Metallo-beta-lactamase JDM601_3955 5fd78438e44c72f429577239d67eab33 259 Gene3D G3DSA:3.60.15.10 9 192 2.3E-38 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like JDM601_0244 c1b95695b5a6f1105722f5250e4f17b6 101 SMART SM00862 21 92 1.9E-10 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 JDM601_0244 c1b95695b5a6f1105722f5250e4f17b6 101 Gene3D G3DSA:1.10.10.10 2 98 1.3E-15 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JDM601_0244 c1b95695b5a6f1105722f5250e4f17b6 101 Pfam PF00486 Transcriptional regulatory protein, C terminal 28 92 4.8E-12 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 JDM601_0244 c1b95695b5a6f1105722f5250e4f17b6 101 SUPERFAMILY SSF46894 4 92 1.9E-13 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 JDM601_1649 5fceb762213d4f15b6dcbcf9ad6f69d6 403 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 2 238 1.3E-44 T 12-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal JDM601_1649 5fceb762213d4f15b6dcbcf9ad6f69d6 403 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 247 360 5.1E-33 T 12-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal JDM601_1649 5fceb762213d4f15b6dcbcf9ad6f69d6 403 SUPERFAMILY SSF53901 2 243 8.78E-52 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 JDM601_1649 5fceb762213d4f15b6dcbcf9ad6f69d6 403 SUPERFAMILY SSF53901 205 403 1.0E-68 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 JDM601_1649 5fceb762213d4f15b6dcbcf9ad6f69d6 403 Gene3D G3DSA:3.40.47.10 251 403 3.9E-50 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 JDM601_1649 5fceb762213d4f15b6dcbcf9ad6f69d6 403 Gene3D G3DSA:3.40.47.10 1 250 6.7E-64 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 JDM601_1649 5fceb762213d4f15b6dcbcf9ad6f69d6 403 SMART SM00825 Beta-ketoacyl synthase 5 403 3.7E-14 T 12-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain JDM601_2389 5ebcdee0bbdf7ce3357d136cb422591d 217 SUPERFAMILY SSF46689 17 94 5.64E-17 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JDM601_2389 5ebcdee0bbdf7ce3357d136cb422591d 217 Pfam PF00440 Bacterial regulatory proteins, tetR family 26 72 1.3E-16 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_2389 5ebcdee0bbdf7ce3357d136cb422591d 217 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 26 39 1.3E-9 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_2389 5ebcdee0bbdf7ce3357d136cb422591d 217 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 47 70 1.3E-9 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_2389 5ebcdee0bbdf7ce3357d136cb422591d 217 Gene3D G3DSA:1.10.357.10 17 210 1.1E-26 T 12-10-2018 JDM601_1554 d823a389429926e07252014563339d0f 352 Pfam PF02562 PhoH-like protein 122 324 3.0E-93 T 12-10-2018 IPR003714 PhoH-like protein GO:0005524 JDM601_1554 d823a389429926e07252014563339d0f 352 SMART SM00322 13 76 2.7E-6 T 12-10-2018 IPR004087 K Homology domain GO:0003676 JDM601_1554 d823a389429926e07252014563339d0f 352 Gene3D G3DSA:3.40.50.300 119 325 4.3E-75 T 12-10-2018 JDM601_1554 d823a389429926e07252014563339d0f 352 SUPERFAMILY SSF52540 121 297 4.8E-40 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_3591 986f0e40a2873eecb1eb8ba40e9ff1f7 278 SUPERFAMILY SSF53474 37 272 1.47E-31 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_3591 986f0e40a2873eecb1eb8ba40e9ff1f7 278 Gene3D G3DSA:3.40.50.1820 45 273 2.0E-33 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_3591 986f0e40a2873eecb1eb8ba40e9ff1f7 278 Pfam PF00756 Putative esterase 73 270 8.1E-8 T 12-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 JDM601_2959 bc7f318ac49971616bdbc9c13ae70732 99 Gene3D G3DSA:1.10.287.850 1 98 2.5E-32 T 12-10-2018 JDM601_2959 bc7f318ac49971616bdbc9c13ae70732 99 Pfam PF00934 PE family 1 93 3.3E-32 T 12-10-2018 IPR000084 PE-PGRS family, N-terminal JDM601_2959 bc7f318ac49971616bdbc9c13ae70732 99 SUPERFAMILY SSF140459 8 84 2.17E-23 T 12-10-2018 JDM601_1804 54256bfa014baabb9c05117f7c9b9ff0 375 Pfam PF13367 Protease prsW family 63 253 4.3E-42 T 12-10-2018 IPR026898 Protease PrsW GO:0008233 JDM601_0012 c3d0eb35abeab378f1e59d9d54fcaeed 93 Hamap MF_00631 Cell division protein CrgA [crgA]. 1 93 22.204 T 12-10-2018 IPR009619 Cell division protein CrgA JDM601_0012 c3d0eb35abeab378f1e59d9d54fcaeed 93 Pfam PF06781 Cell division protein CrgA 1 93 1.4E-31 T 12-10-2018 IPR009619 Cell division protein CrgA JDM601_2860 ca6a2935213cffae8eba4fd8d8e9ac29 184 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 37 146 2.3E-23 T 12-10-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 JDM601_2860 ca6a2935213cffae8eba4fd8d8e9ac29 184 SUPERFAMILY SSF56770 9 152 4.97E-65 T 12-10-2018 JDM601_2860 ca6a2935213cffae8eba4fd8d8e9ac29 184 Hamap MF_01356 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic [ndhK]. 1 151 42.629 T 12-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 JDM601_2860 ca6a2935213cffae8eba4fd8d8e9ac29 184 ProSitePatterns PS01150 Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. 118 134 - T 12-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 JDM601_2860 ca6a2935213cffae8eba4fd8d8e9ac29 184 TIGRFAM TIGR01957 nuoB_fam: NADH-quinone oxidoreductase, B subunit 11 152 2.3E-69 T 12-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 JDM601_2860 ca6a2935213cffae8eba4fd8d8e9ac29 184 Gene3D G3DSA:3.40.50.12280 2 170 1.8E-72 T 12-10-2018 JDM601_3793 5fc3b91eb3eca83ce7e78e742811a3e3 324 Pfam PF02470 MlaD protein 41 112 4.8E-11 T 12-10-2018 IPR003399 Mce/MlaD JDM601_1083 c0b33595f93b375b7d78536cf3e1975b 89 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 14 56 8.1E-6 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 JDM601_1083 c0b33595f93b375b7d78536cf3e1975b 89 Gene3D G3DSA:1.10.540.10 12 66 6.8E-7 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 JDM601_1083 c0b33595f93b375b7d78536cf3e1975b 89 SUPERFAMILY SSF56645 10 76 1.37E-7 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 JDM601_3268 3e3729a94f56c0d5aba8f7f6956f8549 168 ProSitePatterns PS00360 Ribosomal protein S9 signature. 107 125 - T 12-10-2018 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 JDM601_3268 3e3729a94f56c0d5aba8f7f6956f8549 168 Gene3D G3DSA:3.30.230.10 42 168 1.1E-45 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup JDM601_3268 3e3729a94f56c0d5aba8f7f6956f8549 168 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 39 168 31.566 T 12-10-2018 IPR023035 Ribosomal protein S9, bacterial/plastid JDM601_3268 3e3729a94f56c0d5aba8f7f6956f8549 168 SUPERFAMILY SSF54211 44 168 4.55E-43 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold JDM601_3268 3e3729a94f56c0d5aba8f7f6956f8549 168 Pfam PF00380 Ribosomal protein S9/S16 48 168 4.4E-41 T 12-10-2018 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 JDM601_0240 7bd505fcc7c7ac495b9cc6928e9706f8 379 SUPERFAMILY SSF69618 11 277 3.66E-51 T 12-10-2018 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 JDM601_0240 7bd505fcc7c7ac495b9cc6928e9706f8 379 SUPERFAMILY SSF46894 286 372 2.81E-14 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 JDM601_0240 7bd505fcc7c7ac495b9cc6928e9706f8 379 Gene3D G3DSA:3.40.50.10090 42 185 1.8E-63 T 12-10-2018 JDM601_0240 7bd505fcc7c7ac495b9cc6928e9706f8 379 SMART SM00862 302 372 7.0E-15 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 JDM601_0240 7bd505fcc7c7ac495b9cc6928e9706f8 379 Pfam PF02602 Uroporphyrinogen-III synthase HemD 23 268 8.7E-37 T 12-10-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 JDM601_0240 7bd505fcc7c7ac495b9cc6928e9706f8 379 Pfam PF00486 Transcriptional regulatory protein, C terminal 308 372 1.9E-13 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 JDM601_0240 7bd505fcc7c7ac495b9cc6928e9706f8 379 Gene3D G3DSA:1.10.10.10 281 376 1.1E-17 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JDM601_0240 7bd505fcc7c7ac495b9cc6928e9706f8 379 Gene3D G3DSA:3.40.50.10090 15 268 1.8E-63 T 12-10-2018 JDM601_0470 f929fd67070ac30b014d041a215555e4 173 Gene3D G3DSA:3.30.530.20 8 161 8.8E-6 T 12-10-2018 IPR023393 START-like domain superfamily JDM601_0470 f929fd67070ac30b014d041a215555e4 173 SUPERFAMILY SSF55961 3 153 1.89E-7 T 12-10-2018 JDM601_0470 f929fd67070ac30b014d041a215555e4 173 Pfam PF10698 Protein of unknown function (DUF2505) 7 164 1.2E-50 T 12-10-2018 IPR019639 Protein of unknown function DUF2505 JDM601_2888 f2cba837e3b129009c064f275f00182b 79 Gene3D G3DSA:3.40.1620.10 1 42 1.2E-7 T 12-10-2018 JDM601_2888 f2cba837e3b129009c064f275f00182b 79 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 4 45 5.4E-10 T 12-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM JDM601_2888 f2cba837e3b129009c064f275f00182b 79 SUPERFAMILY SSF143120 4 46 2.35E-9 T 12-10-2018 IPR036165 YefM-like superfamily JDM601_3047 365273ef4af777652c87687158173149 328 Gene3D G3DSA:3.20.20.30 1 325 5.4E-62 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 JDM601_3047 365273ef4af777652c87687158173149 328 Pfam PF00296 Luciferase-like monooxygenase 3 296 1.2E-50 T 12-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 JDM601_3047 365273ef4af777652c87687158173149 328 SUPERFAMILY SSF51679 1 320 1.44E-60 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 JDM601_3047 365273ef4af777652c87687158173149 328 TIGRFAM TIGR03557 F420_G6P_family: F420-dependent oxidoreductase, G6PDH family 4 325 9.1E-145 T 12-10-2018 IPR019945 F420-dependent glucose-6-phosphate dehydrogenase-related JDM601_4266 46b409ca6ac31a4c0d772c2e07cb0272 291 SUPERFAMILY SSF51735 8 251 5.41E-53 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_4266 46b409ca6ac31a4c0d772c2e07cb0272 291 Pfam PF00106 short chain dehydrogenase 11 202 2.6E-41 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_4266 46b409ca6ac31a4c0d772c2e07cb0272 291 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 2.2E-18 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_4266 46b409ca6ac31a4c0d772c2e07cb0272 291 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 85 96 2.2E-18 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_4266 46b409ca6ac31a4c0d772c2e07cb0272 291 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 2.2E-18 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_4266 46b409ca6ac31a4c0d772c2e07cb0272 291 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 184 201 2.2E-18 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_4266 46b409ca6ac31a4c0d772c2e07cb0272 291 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 139 147 3.5E-6 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_4266 46b409ca6ac31a4c0d772c2e07cb0272 291 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 85 96 3.5E-6 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_4266 46b409ca6ac31a4c0d772c2e07cb0272 291 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 159 178 3.5E-6 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_4266 46b409ca6ac31a4c0d772c2e07cb0272 291 Gene3D G3DSA:3.40.50.720 6 285 7.7E-62 T 12-10-2018 JDM601_3722 84db079de4b484cf7ef48aeb6a3902fa 395 SUPERFAMILY SSF53474 88 392 2.47E-25 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_3722 84db079de4b484cf7ef48aeb6a3902fa 395 PIRSF PIRSF029171 1 395 2.9E-92 T 12-10-2018 IPR005152 Lipase, secreted GO:0004806|GO:0016042 JDM601_3722 84db079de4b484cf7ef48aeb6a3902fa 395 Pfam PF00326 Prolyl oligopeptidase family 332 377 6.9E-6 T 12-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 JDM601_3722 84db079de4b484cf7ef48aeb6a3902fa 395 Pfam PF03583 Secretory lipase 130 232 1.9E-6 T 12-10-2018 IPR005152 Lipase, secreted GO:0004806|GO:0016042 JDM601_3722 84db079de4b484cf7ef48aeb6a3902fa 395 Gene3D G3DSA:3.40.50.1820 311 395 1.9E-8 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_3722 84db079de4b484cf7ef48aeb6a3902fa 395 Gene3D G3DSA:3.40.50.1820 58 263 4.4E-50 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_4184 aa1d5816448983914542d590093e3a3b 321 Pfam PF13180 PDZ domain 236 301 1.5E-14 T 12-10-2018 IPR001478 PDZ domain GO:0005515 JDM601_4184 aa1d5816448983914542d590093e3a3b 321 SUPERFAMILY SSF50494 13 220 8.85E-45 T 12-10-2018 IPR009003 Peptidase S1, PA clan JDM601_4184 aa1d5816448983914542d590093e3a3b 321 PRINTS PR00834 HtrA/DegQ protease family signature 52 64 2.8E-27 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 JDM601_4184 aa1d5816448983914542d590093e3a3b 321 PRINTS PR00834 HtrA/DegQ protease family signature 263 275 2.8E-27 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 JDM601_4184 aa1d5816448983914542d590093e3a3b 321 PRINTS PR00834 HtrA/DegQ protease family signature 159 176 2.8E-27 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 JDM601_4184 aa1d5816448983914542d590093e3a3b 321 PRINTS PR00834 HtrA/DegQ protease family signature 115 139 2.8E-27 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 JDM601_4184 aa1d5816448983914542d590093e3a3b 321 PRINTS PR00834 HtrA/DegQ protease family signature 74 94 2.8E-27 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 JDM601_4184 aa1d5816448983914542d590093e3a3b 321 PRINTS PR00834 HtrA/DegQ protease family signature 181 198 2.8E-27 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 JDM601_4184 aa1d5816448983914542d590093e3a3b 321 SMART SM00228 235 305 1.2E-7 T 12-10-2018 IPR001478 PDZ domain GO:0005515 JDM601_4184 aa1d5816448983914542d590093e3a3b 321 Gene3D G3DSA:2.40.10.120 10 223 5.8E-50 T 12-10-2018 JDM601_4184 aa1d5816448983914542d590093e3a3b 321 SUPERFAMILY SSF50156 247 317 7.76E-16 T 12-10-2018 IPR036034 PDZ superfamily GO:0005515 JDM601_4184 aa1d5816448983914542d590093e3a3b 321 Pfam PF13365 Trypsin-like peptidase domain 43 188 1.5E-27 T 12-10-2018 JDM601_4184 aa1d5816448983914542d590093e3a3b 321 Gene3D G3DSA:2.30.42.10 234 318 1.8E-18 T 12-10-2018 JDM601_0553 c4c6c0fc744bce33527c4f371caae4e4 135 Pfam PF04075 F420H(2)-dependent quinone reductase 15 86 7.8E-5 T 12-10-2018 IPR004378 F420H(2)-dependent quinone reductase GO:0016491|GO:0055114 JDM601_0553 c4c6c0fc744bce33527c4f371caae4e4 135 Gene3D G3DSA:2.30.110.10 8 110 1.2E-8 T 12-10-2018 IPR012349 FMN-binding split barrel GO:0048037 JDM601_0057 313250e4fb443121604c0cfc656bee3d 1403 Gene3D G3DSA:3.40.50.300 459 763 3.5E-66 T 12-10-2018 JDM601_0057 313250e4fb443121604c0cfc656bee3d 1403 TIGRFAM TIGR03925 T7SS_EccC_b: type VII secretion protein EccCb 805 1390 2.6E-149 T 12-10-2018 IPR023837 EccCb-like, Actinobacteria JDM601_0057 313250e4fb443121604c0cfc656bee3d 1403 Gene3D G3DSA:3.40.50.300 1150 1392 8.7E-37 T 12-10-2018 JDM601_0057 313250e4fb443121604c0cfc656bee3d 1403 Pfam PF01580 FtsK/SpoIIIE family 839 1100 5.0E-56 T 12-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 JDM601_0057 313250e4fb443121604c0cfc656bee3d 1403 Pfam PF01580 FtsK/SpoIIIE family 516 705 3.6E-16 T 12-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 JDM601_0057 313250e4fb443121604c0cfc656bee3d 1403 Gene3D G3DSA:3.40.50.300 819 1139 5.3E-45 T 12-10-2018 JDM601_0057 313250e4fb443121604c0cfc656bee3d 1403 SUPERFAMILY SSF52540 1154 1329 2.39E-5 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_0057 313250e4fb443121604c0cfc656bee3d 1403 SUPERFAMILY SSF52540 495 707 4.94E-16 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_0057 313250e4fb443121604c0cfc656bee3d 1403 TIGRFAM TIGR03924 T7SS_EccC_a: type VII secretion protein EccCa 24 743 3.8E-212 T 12-10-2018 IPR023836 EccCa-like, Actinobacteria JDM601_0057 313250e4fb443121604c0cfc656bee3d 1403 SUPERFAMILY SSF52540 847 1069 9.0E-6 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_0666 e6ae5fc297349ef67ae8aa8a22c828a3 287 Gene3D G3DSA:3.40.50.150 11 287 1.7E-91 T 12-10-2018 JDM601_0666 e6ae5fc297349ef67ae8aa8a22c828a3 287 PIRSF PIRSF003085 2 287 3.1E-97 T 12-10-2018 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 JDM601_0666 e6ae5fc297349ef67ae8aa8a22c828a3 287 Pfam PF02353 Mycolic acid cyclopropane synthetase 4 282 2.3E-100 T 12-10-2018 JDM601_0666 e6ae5fc297349ef67ae8aa8a22c828a3 287 SUPERFAMILY SSF53335 12 287 5.68E-70 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JDM601_4138 44bebb572f8ea5175ae8bc8c3d626303 157 Pfam PF11196 Protein of unknown function (DUF2834) 41 148 1.2E-31 T 12-10-2018 IPR021362 Protein of unknown function DUF2834 JDM601_2143 a35efd1de9329973fec03883ac97c907 250 Gene3D G3DSA:3.20.20.70 4 250 2.7E-90 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JDM601_2143 a35efd1de9329973fec03883ac97c907 250 SUPERFAMILY SSF51366 6 246 1.01E-58 T 12-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 JDM601_2143 a35efd1de9329973fec03883ac97c907 250 TIGRFAM TIGR01919 hisA-trpF: bifunctional HisA/TrpF protein 5 249 3.5E-131 T 12-10-2018 IPR010188 Bifunctional HisA/TrpF GO:0000105|GO:0000162|GO:0003949|GO:0004640|GO:0005737 KEGG: 00340+5.3.1.16 JDM601_2143 a35efd1de9329973fec03883ac97c907 250 Pfam PF00977 Histidine biosynthesis protein 7 240 1.0E-58 T 12-10-2018 IPR006062 Histidine biosynthesis GO:0000105 JDM601_2143 a35efd1de9329973fec03883ac97c907 250 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 6 247 31.485 T 12-10-2018 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 JDM601_3828 4e4023229a1cef976ce0987666837092 416 Gene3D G3DSA:3.10.129.10 281 383 1.8E-16 T 12-10-2018 JDM601_3828 4e4023229a1cef976ce0987666837092 416 SUPERFAMILY SSF54637 216 388 3.68E-17 T 12-10-2018 IPR029069 HotDog domain superfamily JDM601_3828 4e4023229a1cef976ce0987666837092 416 Pfam PF13452 N-terminal half of MaoC dehydratase 36 164 5.4E-11 T 12-10-2018 IPR039569 N-terminal of MaoC-like dehydratase Reactome: R-HSA-193368|Reactome: R-HSA-2046106|Reactome: R-HSA-389887|Reactome: R-HSA-390247|Reactome: R-HSA-9033241|Reactome: R-HSA-9033500 JDM601_3828 4e4023229a1cef976ce0987666837092 416 SUPERFAMILY SSF54637 35 185 3.67E-17 T 12-10-2018 IPR029069 HotDog domain superfamily JDM601_3828 4e4023229a1cef976ce0987666837092 416 Gene3D G3DSA:3.10.129.10 31 186 1.6E-27 T 12-10-2018 JDM601_3346 481a5e81e69d0a7d8a99351b2c8b80a2 251 Pfam PF02633 Creatinine amidohydrolase 11 238 1.2E-57 T 12-10-2018 IPR003785 Creatininase/formamide hydrolase KEGG: 00740+3.5.1.102|MetaCyc: PWY-6167 JDM601_3346 481a5e81e69d0a7d8a99351b2c8b80a2 251 Gene3D G3DSA:3.40.50.10310 7 243 7.4E-53 T 12-10-2018 IPR024087 Creatininase-like superfamily KEGG: 00740+3.5.1.102|MetaCyc: PWY-6167 JDM601_3346 481a5e81e69d0a7d8a99351b2c8b80a2 251 TIGRFAM TIGR03964 mycofact_creat: mycofactocin system creatininase family protein 16 250 1.3E-103 T 12-10-2018 IPR023871 Mycofactocin system creatininase family protein JDM601_3346 481a5e81e69d0a7d8a99351b2c8b80a2 251 SUPERFAMILY SSF102215 9 242 4.18E-56 T 12-10-2018 IPR024087 Creatininase-like superfamily KEGG: 00740+3.5.1.102|MetaCyc: PWY-6167 JDM601_2016 f5861bc282c40cc37c254bbb733b796c 257 SUPERFAMILY SSF52096 2 256 9.36E-76 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily JDM601_2016 f5861bc282c40cc37c254bbb733b796c 257 Gene3D G3DSA:1.10.12.10 200 257 5.4E-12 T 12-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal JDM601_2016 f5861bc282c40cc37c254bbb733b796c 257 Pfam PF00378 Enoyl-CoA hydratase/isomerase 9 256 1.4E-49 T 12-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 JDM601_2016 f5861bc282c40cc37c254bbb733b796c 257 Gene3D G3DSA:3.90.226.10 1 198 1.1E-63 T 12-10-2018 JDM601_0605 14e3c24b3e83e09901e681d2ed0ab744 303 SUPERFAMILY SSF50494 16 209 7.33E-47 T 12-10-2018 IPR009003 Peptidase S1, PA clan JDM601_0605 14e3c24b3e83e09901e681d2ed0ab744 303 Gene3D G3DSA:2.40.10.120 6 210 2.1E-52 T 12-10-2018 JDM601_0605 14e3c24b3e83e09901e681d2ed0ab744 303 Gene3D G3DSA:2.30.42.10 211 302 4.4E-10 T 12-10-2018 JDM601_0605 14e3c24b3e83e09901e681d2ed0ab744 303 SUPERFAMILY SSF50156 188 294 2.4E-11 T 12-10-2018 IPR036034 PDZ superfamily GO:0005515 JDM601_0605 14e3c24b3e83e09901e681d2ed0ab744 303 PRINTS PR00834 HtrA/DegQ protease family signature 50 62 4.1E-28 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 JDM601_0605 14e3c24b3e83e09901e681d2ed0ab744 303 PRINTS PR00834 HtrA/DegQ protease family signature 246 258 4.1E-28 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 JDM601_0605 14e3c24b3e83e09901e681d2ed0ab744 303 PRINTS PR00834 HtrA/DegQ protease family signature 171 188 4.1E-28 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 JDM601_0605 14e3c24b3e83e09901e681d2ed0ab744 303 PRINTS PR00834 HtrA/DegQ protease family signature 72 92 4.1E-28 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 JDM601_0605 14e3c24b3e83e09901e681d2ed0ab744 303 PRINTS PR00834 HtrA/DegQ protease family signature 111 135 4.1E-28 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 JDM601_0605 14e3c24b3e83e09901e681d2ed0ab744 303 PRINTS PR00834 HtrA/DegQ protease family signature 149 166 4.1E-28 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 JDM601_0605 14e3c24b3e83e09901e681d2ed0ab744 303 Pfam PF13365 Trypsin-like peptidase domain 42 178 1.5E-29 T 12-10-2018 JDM601_0309 55e3c28f30ab5e15e1c149cb37b995a3 100 Pfam PF05305 Protein of unknown function (DUF732) 9 100 3.1E-24 T 12-10-2018 IPR007969 Domain of unknown function DUF732 JDM601_2453 686a5464887e509c4e062ca12cd2ca73 230 SUPERFAMILY SSF47979 65 135 4.58E-26 T 12-10-2018 IPR036421 Iron dependent repressor, metal binding and dimerisation domain superfamily GO:0046914|GO:0046983 JDM601_2453 686a5464887e509c4e062ca12cd2ca73 230 Gene3D G3DSA:1.10.10.10 1 73 3.5E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JDM601_2453 686a5464887e509c4e062ca12cd2ca73 230 SMART SM00529 26 125 8.9E-45 T 12-10-2018 IPR022689 Iron dependent repressor GO:0003700|GO:0006355|GO:0046914 JDM601_2453 686a5464887e509c4e062ca12cd2ca73 230 Gene3D G3DSA:1.10.60.10 74 140 2.4E-28 T 12-10-2018 IPR036421 Iron dependent repressor, metal binding and dimerisation domain superfamily GO:0046914|GO:0046983 JDM601_2453 686a5464887e509c4e062ca12cd2ca73 230 Pfam PF02742 Iron dependent repressor, metal binding and dimerisation domain 65 133 6.7E-28 T 12-10-2018 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 JDM601_2453 686a5464887e509c4e062ca12cd2ca73 230 Pfam PF01325 Iron dependent repressor, N-terminal DNA binding domain 3 62 6.8E-21 T 12-10-2018 IPR022687 DTXR-type HTH domain GO:0003677 JDM601_2453 686a5464887e509c4e062ca12cd2ca73 230 Gene3D G3DSA:2.30.30.90 151 230 1.8E-34 T 12-10-2018 IPR038157 Ferrous iron transporter, core domain JDM601_2453 686a5464887e509c4e062ca12cd2ca73 230 SUPERFAMILY SSF46785 2 62 2.01E-12 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JDM601_2453 686a5464887e509c4e062ca12cd2ca73 230 Pfam PF04023 FeoA domain 152 228 2.5E-8 T 12-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 JDM601_2453 686a5464887e509c4e062ca12cd2ca73 230 SMART SM00899 152 229 4.2E-9 T 12-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 JDM601_2453 686a5464887e509c4e062ca12cd2ca73 230 SUPERFAMILY SSF50037 130 230 7.55E-22 T 12-10-2018 IPR008988 Transcriptional repressor, C-terminal JDM601_3136 8cf8929583a45d28f96c8a4fd469aef8 463 SUPERFAMILY SSF53474 46 259 5.81E-8 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_3136 8cf8929583a45d28f96c8a4fd469aef8 463 Pfam PF08237 PE-PPE domain 81 313 3.2E-47 T 12-10-2018 IPR013228 PE-PPE, C-terminal JDM601_3136 8cf8929583a45d28f96c8a4fd469aef8 463 Gene3D G3DSA:3.40.50.1820 45 199 1.5E-7 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_0870 ec19e2ce63a9e67527d71c8ba0643952 403 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 10 114 1.0E-15 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 JDM601_0870 ec19e2ce63a9e67527d71c8ba0643952 403 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 356 375 - T 12-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 JDM601_0870 ec19e2ce63a9e67527d71c8ba0643952 403 Gene3D G3DSA:1.20.140.10 251 401 7.8E-57 T 12-10-2018 JDM601_0870 ec19e2ce63a9e67527d71c8ba0643952 403 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 250 397 5.9E-52 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 JDM601_0870 ec19e2ce63a9e67527d71c8ba0643952 403 SUPERFAMILY SSF47203 249 401 1.93E-56 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 JDM601_0870 ec19e2ce63a9e67527d71c8ba0643952 403 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 125 222 1.4E-21 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 JDM601_0870 ec19e2ce63a9e67527d71c8ba0643952 403 SUPERFAMILY SSF56645 4 234 7.07E-56 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 JDM601_0870 ec19e2ce63a9e67527d71c8ba0643952 403 Gene3D G3DSA:2.40.110.10 124 238 2.3E-30 T 12-10-2018 JDM601_0870 ec19e2ce63a9e67527d71c8ba0643952 403 Gene3D G3DSA:1.10.540.10 1 116 5.6E-21 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 JDM601_3568 40edbb418fc5ed28de38b2bcf926fd36 562 SUPERFAMILY SSF53474 290 472 7.87E-6 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_3568 40edbb418fc5ed28de38b2bcf926fd36 562 Pfam PF10081 Alpha/beta-hydrolase family 256 547 1.2E-126 T 12-10-2018 IPR027787 Alpha/beta-hydrolase, catalytic domain JDM601_3568 40edbb418fc5ed28de38b2bcf926fd36 562 Pfam PF15420 Alpha/beta-hydrolase family N-terminus 25 238 3.8E-64 T 12-10-2018 IPR027788 Alpha/beta-hydrolase, N-terminal domain JDM601_2819 6776ff50e171e609bd214e40647e5157 1481 SMART SM00382 694 867 0.016 T 12-10-2018 IPR003593 AAA+ ATPase domain JDM601_2819 6776ff50e171e609bd214e40647e5157 1481 SMART SM00382 1297 1479 6.3 T 12-10-2018 IPR003593 AAA+ ATPase domain JDM601_2819 6776ff50e171e609bd214e40647e5157 1481 SMART SM00382 1019 1194 4.3E-4 T 12-10-2018 IPR003593 AAA+ ATPase domain JDM601_2819 6776ff50e171e609bd214e40647e5157 1481 SUPERFAMILY SSF52540 685 879 1.23E-24 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_2819 6776ff50e171e609bd214e40647e5157 1481 Gene3D G3DSA:3.40.50.300 978 1260 1.2E-57 T 12-10-2018 JDM601_2819 6776ff50e171e609bd214e40647e5157 1481 SUPERFAMILY SSF52540 974 1197 3.76E-15 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_2819 6776ff50e171e609bd214e40647e5157 1481 SUPERFAMILY SSF52540 1299 1405 2.38E-6 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_2819 6776ff50e171e609bd214e40647e5157 1481 Gene3D G3DSA:3.40.50.300 637 977 3.5E-76 T 12-10-2018 JDM601_2819 6776ff50e171e609bd214e40647e5157 1481 Gene3D G3DSA:2.60.200.20 102 209 4.9E-12 T 12-10-2018 JDM601_2819 6776ff50e171e609bd214e40647e5157 1481 Pfam PF01580 FtsK/SpoIIIE family 686 876 9.1E-30 T 12-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 JDM601_2819 6776ff50e171e609bd214e40647e5157 1481 Pfam PF01580 FtsK/SpoIIIE family 1010 1198 2.8E-25 T 12-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 JDM601_2819 6776ff50e171e609bd214e40647e5157 1481 Pfam PF16697 Inner membrane component of T3SS, cytoplasmic domain 107 189 1.5E-11 T 12-10-2018 IPR032030 YscD, cytoplasmic domain JDM601_2819 6776ff50e171e609bd214e40647e5157 1481 Gene3D G3DSA:3.40.50.300 367 609 2.1E-16 T 12-10-2018 JDM601_2819 6776ff50e171e609bd214e40647e5157 1481 SUPERFAMILY SSF49879 103 192 4.35E-10 T 12-10-2018 IPR008984 SMAD/FHA domain superfamily GO:0005515 JDM601_1278 ee87afaff286bbaf328370add45ba6b2 163 Gene3D G3DSA:3.40.1050.10 1 163 3.0E-66 T 12-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 JDM601_1278 ee87afaff286bbaf328370add45ba6b2 163 SUPERFAMILY SSF53056 4 161 9.68E-37 T 12-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 JDM601_1278 ee87afaff286bbaf328370add45ba6b2 163 SMART SM00947 23 162 5.6E-27 T 12-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 JDM601_1278 ee87afaff286bbaf328370add45ba6b2 163 Pfam PF00484 Carbonic anhydrase 31 97 8.2E-11 T 12-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 JDM601_1697 2e81caf28b808ae262651927cc8a5471 228 Pfam PF11241 Protein of unknown function (DUF3043) 42 225 6.9E-57 T 12-10-2018 IPR021403 Protein of unknown function DUF3043 JDM601_3475 d771f31bc748a07968210bfdfafa1afe 385 Pfam PF00108 Thiolase, N-terminal domain 1 219 3.2E-13 T 12-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 JDM601_3475 d771f31bc748a07968210bfdfafa1afe 385 SUPERFAMILY SSF53901 31 375 2.04E-34 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 JDM601_3475 d771f31bc748a07968210bfdfafa1afe 385 PIRSF PIRSF000429 1 380 2.4E-55 T 12-10-2018 IPR002155 Thiolase GO:0016747 JDM601_3475 d771f31bc748a07968210bfdfafa1afe 385 Gene3D G3DSA:3.40.47.10 1 380 1.2E-108 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 JDM601_3475 d771f31bc748a07968210bfdfafa1afe 385 Pfam PF02803 Thiolase, C-terminal domain 247 350 4.7E-10 T 12-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 JDM601_4107 6fcf7321fef59988a9fb2ab61dc2f3fd 191 SUPERFAMILY SSF81452 20 190 5.76E-41 T 12-10-2018 IPR035973 Cytochrome c oxidase subunit III-like superfamily GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 JDM601_4107 6fcf7321fef59988a9fb2ab61dc2f3fd 191 Gene3D G3DSA:1.20.120.80 17 191 1.9E-46 T 12-10-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 JDM601_4107 6fcf7321fef59988a9fb2ab61dc2f3fd 191 Pfam PF00510 Cytochrome c oxidase subunit III 23 189 1.4E-13 T 12-10-2018 IPR000298 Cytochrome c oxidase subunit III-like GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 JDM601_1884 3d00d09d496e9050bee04af3ea014a9a 551 Pfam PF13482 RNase_H superfamily 373 544 1.0E-5 T 12-10-2018 IPR038720 YprB, ribonuclease H-like domain JDM601_1335 98b557883239a52963ad3fc22ace5d48 67 Gene3D G3DSA:3.40.50.1010 1 59 6.6E-8 T 12-10-2018 JDM601_1335 98b557883239a52963ad3fc22ace5d48 67 SUPERFAMILY SSF88723 23 59 6.28E-6 T 12-10-2018 IPR029060 PIN-like domain superfamily JDM601_2615 ed39952070b5162ca833eebe771e6e8c 386 PIRSF PIRSF000138 11 386 1.5E-111 T 12-10-2018 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent GO:0010181|GO:0016491|GO:0055114 Reactome: R-HSA-9033241 JDM601_2615 ed39952070b5162ca833eebe771e6e8c 386 SUPERFAMILY SSF51395 24 382 3.45E-85 T 12-10-2018 JDM601_2615 ed39952070b5162ca833eebe771e6e8c 386 Pfam PF01070 FMN-dependent dehydrogenase 33 383 9.5E-109 T 12-10-2018 IPR000262 FMN-dependent dehydrogenase GO:0016491 Reactome: R-HSA-9033241 JDM601_2615 ed39952070b5162ca833eebe771e6e8c 386 Gene3D G3DSA:3.20.20.70 24 386 8.0E-119 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JDM601_0584 d44a0f96895347957adf36bc682d70a4 143 SUPERFAMILY SSF88723 1 131 2.44E-15 T 12-10-2018 IPR029060 PIN-like domain superfamily JDM601_0584 d44a0f96895347957adf36bc682d70a4 143 Pfam PF01850 PIN domain 2 123 2.7E-11 T 12-10-2018 IPR002716 PIN domain JDM601_0584 d44a0f96895347957adf36bc682d70a4 143 Gene3D G3DSA:3.40.50.1010 1 129 5.7E-10 T 12-10-2018 JDM601_0584 d44a0f96895347957adf36bc682d70a4 143 Hamap MF_00265 tRNA(fMet)-specific endonuclease VapC [vapC]. 2 130 12.393 T 12-10-2018 IPR022907 VapC family GO:0004540 JDM601_1822 5a79005bc87e80b97282b43972b09e12 129 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 12-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JDM601_1822 5a79005bc87e80b97282b43972b09e12 129 Gene3D G3DSA:1.10.1900.20 56 118 7.3E-26 T 12-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JDM601_1822 5a79005bc87e80b97282b43972b09e12 129 SUPERFAMILY SSF74731 3 117 1.26E-43 T 12-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JDM601_1822 5a79005bc87e80b97282b43972b09e12 129 Gene3D G3DSA:1.10.720.90 2 55 7.4E-18 T 12-10-2018 JDM601_1822 5a79005bc87e80b97282b43972b09e12 129 PRINTS PR00062 Ribosomal protein L20 signature 42 71 3.5E-37 T 12-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JDM601_1822 5a79005bc87e80b97282b43972b09e12 129 PRINTS PR00062 Ribosomal protein L20 signature 75 101 3.5E-37 T 12-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JDM601_1822 5a79005bc87e80b97282b43972b09e12 129 PRINTS PR00062 Ribosomal protein L20 signature 12 41 3.5E-37 T 12-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JDM601_1822 5a79005bc87e80b97282b43972b09e12 129 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 1.1E-42 T 12-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JDM601_1822 5a79005bc87e80b97282b43972b09e12 129 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 21 70 1.0E-21 T 12-10-2018 JDM601_1822 5a79005bc87e80b97282b43972b09e12 129 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 27.95 T 12-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JDM601_1822 5a79005bc87e80b97282b43972b09e12 129 Pfam PF00453 Ribosomal protein L20 3 109 1.0E-41 T 12-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JDM601_1146 d3cade199557b3a2ac817e4d488379e3 86 Pfam PF01329 Pterin 4 alpha carbinolamine dehydratase 3 83 3.0E-23 T 12-10-2018 IPR001533 Pterin 4 alpha carbinolamine dehydratase GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 JDM601_1146 d3cade199557b3a2ac817e4d488379e3 86 Gene3D G3DSA:3.30.1360.20 1 86 7.3E-25 T 12-10-2018 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 JDM601_1146 d3cade199557b3a2ac817e4d488379e3 86 SUPERFAMILY SSF55248 2 84 2.35E-24 T 12-10-2018 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 JDM601_0330 355a7f919ea78942edd3b3b43cdd8f04 944 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 399 410 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site JDM601_0330 355a7f919ea78942edd3b3b43cdd8f04 944 SUPERFAMILY SSF46548 281 427 5.49E-20 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 JDM601_0330 355a7f919ea78942edd3b3b43cdd8f04 944 Pfam PF13183 4Fe-4S dicluster domain 295 413 1.8E-11 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain JDM601_0330 355a7f919ea78942edd3b3b43cdd8f04 944 Pfam PF02754 Cysteine-rich domain 484 575 2.8E-17 T 12-10-2018 IPR004017 Cysteine-rich domain JDM601_0330 355a7f919ea78942edd3b3b43cdd8f04 944 Pfam PF02754 Cysteine-rich domain 614 700 6.2E-18 T 12-10-2018 IPR004017 Cysteine-rich domain JDM601_1559 6d947179e87962c2e6fc44c13abccae4 485 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 172 190 3.9E-5 T 12-10-2018 JDM601_1559 6d947179e87962c2e6fc44c13abccae4 485 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 3.9E-5 T 12-10-2018 JDM601_1559 6d947179e87962c2e6fc44c13abccae4 485 Gene3D G3DSA:3.50.50.60 315 471 3.5E-37 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_1559 6d947179e87962c2e6fc44c13abccae4 485 SUPERFAMILY SSF51905 6 210 2.46E-56 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_1559 6d947179e87962c2e6fc44c13abccae4 485 SUPERFAMILY SSF51905 279 454 4.4E-19 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_1559 6d947179e87962c2e6fc44c13abccae4 485 Gene3D G3DSA:3.50.50.60 5 237 1.5E-64 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_1559 6d947179e87962c2e6fc44c13abccae4 485 Pfam PF13738 Pyridine nucleotide-disulphide oxidoreductase 9 206 1.1E-17 T 12-10-2018 JDM601_1559 6d947179e87962c2e6fc44c13abccae4 485 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 168 192 8.4E-6 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 JDM601_1559 6d947179e87962c2e6fc44c13abccae4 485 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 7 29 8.4E-6 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 JDM601_1559 6d947179e87962c2e6fc44c13abccae4 485 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 129 137 8.4E-6 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 JDM601_1386 14d976c68a7bc843a50018f5c46f425f 155 SUPERFAMILY SSF54593 4 152 7.09E-42 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase JDM601_1386 14d976c68a7bc843a50018f5c46f425f 155 Pfam PF06983 3-demethylubiquinone-9 3-methyltransferase 4 114 5.0E-40 T 12-10-2018 IPR028973 PhnB-like JDM601_1386 14d976c68a7bc843a50018f5c46f425f 155 Gene3D G3DSA:3.10.180.70 2 155 3.4E-59 T 12-10-2018 JDM601_1386 14d976c68a7bc843a50018f5c46f425f 155 PIRSF PIRSF021700 1 154 8.1E-58 T 12-10-2018 IPR009725 Predicted 3-demethylubiquinone-9 3-methyltransferase JDM601_1111 bedcb89404d11a5e38bae128de702f82 377 Pfam PF17198 Spirocyclase AveC-like 98 329 4.8E-83 T 12-10-2018 IPR033459 Spirocyclase AveC-like JDM601_2652 d9e093d8d120ff118a36a0e09584a470 129 Pfam PF12680 SnoaL-like domain 9 103 3.0E-12 T 12-10-2018 IPR037401 SnoaL-like domain JDM601_2652 d9e093d8d120ff118a36a0e09584a470 129 SUPERFAMILY SSF54427 3 121 3.79E-24 T 12-10-2018 IPR032710 NTF2-like domain superfamily JDM601_2652 d9e093d8d120ff118a36a0e09584a470 129 Gene3D G3DSA:3.10.450.50 1 120 2.6E-24 T 12-10-2018 JDM601_2168 bdcee6f0dda6b26ede7f219f4ff400bc 452 Pfam PF12821 Threonine/Serine exporter, ThrE 281 402 1.2E-11 T 12-10-2018 IPR024528 Threonine/Serine exporter, ThrE JDM601_2168 bdcee6f0dda6b26ede7f219f4ff400bc 452 Pfam PF06738 Putative threonine/serine exporter 11 255 1.2E-49 T 12-10-2018 IPR010619 Putative threonine/serine exporter JDM601_2571 4df6390182637e4272fea1d1e3bfd85a 405 Gene3D G3DSA:3.30.950.10 283 404 3.6E-40 T 12-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 JDM601_2571 4df6390182637e4272fea1d1e3bfd85a 405 Gene3D G3DSA:3.40.1010.10 165 282 7.5E-39 T 12-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 JDM601_2571 4df6390182637e4272fea1d1e3bfd85a 405 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 10 135 8.2E-19 T 12-10-2018 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 JDM601_2571 4df6390182637e4272fea1d1e3bfd85a 405 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 169 380 1.4E-47 T 12-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 JDM601_2571 4df6390182637e4272fea1d1e3bfd85a 405 ProSitePatterns PS00141 Eukaryotic and viral aspartyl proteases active site. 32 43 - T 12-10-2018 IPR001969 Aspartic peptidase, active site GO:0004190|GO:0006508 JDM601_2571 4df6390182637e4272fea1d1e3bfd85a 405 SUPERFAMILY SSF53790 163 402 1.57E-70 T 12-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 JDM601_2571 4df6390182637e4272fea1d1e3bfd85a 405 SUPERFAMILY SSF51735 7 109 1.71E-19 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_2571 4df6390182637e4272fea1d1e3bfd85a 405 Gene3D G3DSA:3.40.50.720 6 133 1.3E-25 T 12-10-2018 JDM601_2571 4df6390182637e4272fea1d1e3bfd85a 405 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 167 402 1.5E-80 T 12-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 JDM601_2571 4df6390182637e4272fea1d1e3bfd85a 405 PIRSF PIRSF036426 3 164 2.0E-29 T 12-10-2018 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 JDM601_2571 4df6390182637e4272fea1d1e3bfd85a 405 PIRSF PIRSF036426 153 404 1.1E-89 T 12-10-2018 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 JDM601_2571 4df6390182637e4272fea1d1e3bfd85a 405 Pfam PF13241 Putative NAD(P)-binding 10 118 4.5E-19 T 12-10-2018 JDM601_2867 62d98078bbb8900b9b9df07177bbfe86 189 Gene3D G3DSA:3.30.70.3270 27 173 1.0E-46 T 12-10-2018 JDM601_2867 62d98078bbb8900b9b9df07177bbfe86 189 SUPERFAMILY SSF54862 27 142 3.14E-26 T 12-10-2018 JDM601_2867 62d98078bbb8900b9b9df07177bbfe86 189 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 54 65 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site JDM601_2867 62d98078bbb8900b9b9df07177bbfe86 189 Pfam PF12838 4Fe-4S dicluster domain 53 113 6.0E-12 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain JDM601_2867 62d98078bbb8900b9b9df07177bbfe86 189 Hamap MF_01351 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic [ndhI]. 1 147 27.034 T 12-10-2018 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 JDM601_2867 62d98078bbb8900b9b9df07177bbfe86 189 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 99 110 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site JDM601_2867 62d98078bbb8900b9b9df07177bbfe86 189 TIGRFAM TIGR01971 NuoI: NADH-quinone oxidoreductase, chain I 10 137 4.7E-40 T 12-10-2018 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 JDM601_4278 f443ac7080e280667c3871323c987f36 134 PIRSF PIRSF021591 1 134 3.4E-46 T 12-10-2018 IPR016793 Uncharacterised conserved protein UCP021591 JDM601_0216 17207844b1fb6d34090f9f912f81ecc3 459 Gene3D G3DSA:3.40.309.10 236 425 7.6E-160 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 JDM601_0216 17207844b1fb6d34090f9f912f81ecc3 459 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 260 271 - T 12-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 JDM601_0216 17207844b1fb6d34090f9f912f81ecc3 459 Pfam PF00171 Aldehyde dehydrogenase family 4 456 2.5E-145 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 JDM601_0216 17207844b1fb6d34090f9f912f81ecc3 459 SUPERFAMILY SSF53720 4 458 1.13E-147 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 JDM601_0216 17207844b1fb6d34090f9f912f81ecc3 459 Gene3D G3DSA:3.40.605.10 9 451 7.6E-160 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 JDM601_1230 239395cf58a49340357e6b302e7ab1e5 343 Gene3D G3DSA:3.20.20.30 1 341 2.2E-88 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 JDM601_1230 239395cf58a49340357e6b302e7ab1e5 343 SUPERFAMILY SSF51679 2 317 7.07E-72 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 JDM601_1230 239395cf58a49340357e6b302e7ab1e5 343 Pfam PF00296 Luciferase-like monooxygenase 11 304 9.2E-40 T 12-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 JDM601_1230 239395cf58a49340357e6b302e7ab1e5 343 TIGRFAM TIGR03558 oxido_grp_1: luciferase family oxidoreductase, group 1 3 321 1.9E-113 T 12-10-2018 IPR019949 Luciferase family oxidoreductase, group 1 JDM601_1801 46be1df0183af1b17c335d134a349d95 175 SUPERFAMILY SSF50249 50 156 2.06E-18 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold JDM601_1801 46be1df0183af1b17c335d134a349d95 175 Pfam PF01796 DUF35 OB-fold domain, acyl-CoA-associated 85 152 1.5E-11 T 12-10-2018 IPR002878 Domain of unknown function DUF35, OB-fold, C-terminal JDM601_1801 46be1df0183af1b17c335d134a349d95 175 Pfam PF12172 Rubredoxin-like zinc ribbon domain (DUF35_N) 50 82 2.3E-7 T 12-10-2018 IPR022002 Domain of unknown function DUF35, rubredoxin-like zinc ribbon domain, N-terminal JDM601_2727 a9c92a95addca799d42d3cfe72b321c6 361 SUPERFAMILY SSF50952 42 324 2.62E-16 T 12-10-2018 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 JDM601_2727 a9c92a95addca799d42d3cfe72b321c6 361 Pfam PF07995 Glucose / Sorbosone dehydrogenase 68 248 3.0E-15 T 12-10-2018 IPR012938 Glucose/Sorbosone dehydrogenase JDM601_2727 a9c92a95addca799d42d3cfe72b321c6 361 Gene3D G3DSA:2.120.10.30 34 346 6.4E-36 T 12-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like JDM601_3192 128bbd3e4750363aa849fbb1cbeae75c 96 Pfam PF11222 Protein of unknown function (DUF3017) 16 89 2.6E-19 T 12-10-2018 IPR021385 Protein of unknown function DUF3017 JDM601_0220 6aecefa57494e51c673359117742b992 395 Gene3D G3DSA:3.20.20.300 56 391 5.6E-114 T 12-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 JDM601_0220 6aecefa57494e51c673359117742b992 395 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 63 384 3.0E-81 T 12-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 JDM601_0220 6aecefa57494e51c673359117742b992 395 SUPERFAMILY SSF51445 70 387 2.42E-58 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily JDM601_1448 e904da67ce17db7b6a8b078c3bee5c8c 215 Pfam PF00574 Clp protease 31 207 8.9E-76 T 12-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA JDM601_1448 e904da67ce17db7b6a8b078c3bee5c8c 215 SUPERFAMILY SSF52096 25 209 1.95E-63 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily JDM601_1448 e904da67ce17db7b6a8b078c3bee5c8c 215 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 125 138 - T 12-10-2018 IPR033135 ClpP, histidine active site JDM601_1448 e904da67ce17db7b6a8b078c3bee5c8c 215 Gene3D G3DSA:3.90.226.10 5 215 5.0E-80 T 12-10-2018 JDM601_1448 e904da67ce17db7b6a8b078c3bee5c8c 215 PRINTS PR00127 Clp protease catalytic subunit P signature 72 92 2.6E-42 T 12-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 JDM601_1448 e904da67ce17db7b6a8b078c3bee5c8c 215 PRINTS PR00127 Clp protease catalytic subunit P signature 32 47 2.6E-42 T 12-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 JDM601_1448 e904da67ce17db7b6a8b078c3bee5c8c 215 PRINTS PR00127 Clp protease catalytic subunit P signature 124 143 2.6E-42 T 12-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 JDM601_1448 e904da67ce17db7b6a8b078c3bee5c8c 215 PRINTS PR00127 Clp protease catalytic subunit P signature 183 202 2.6E-42 T 12-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 JDM601_1448 e904da67ce17db7b6a8b078c3bee5c8c 215 PRINTS PR00127 Clp protease catalytic subunit P signature 103 120 2.6E-42 T 12-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 JDM601_1448 e904da67ce17db7b6a8b078c3bee5c8c 215 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 16 208 38.811 T 12-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 JDM601_1448 e904da67ce17db7b6a8b078c3bee5c8c 215 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 103 114 - T 12-10-2018 IPR018215 ClpP, Ser active site JDM601_0212 2f48a4e64910a313f5193cd56f0aff16 368 TIGRFAM TIGR04036 LLM_CE1758_fam: putative luciferase-like monooxygenase, FMN-dependent, CE1758 family 4 357 2.9E-207 T 12-10-2018 IPR023934 Luciferase-like monooxygenase, FMN-dependent, putative JDM601_0212 2f48a4e64910a313f5193cd56f0aff16 368 Pfam PF00296 Luciferase-like monooxygenase 4 292 1.5E-58 T 12-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 JDM601_0212 2f48a4e64910a313f5193cd56f0aff16 368 Gene3D G3DSA:3.20.20.30 1 341 7.7E-71 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 JDM601_0212 2f48a4e64910a313f5193cd56f0aff16 368 SUPERFAMILY SSF51679 4 336 3.4E-72 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 JDM601_0190 609c92fb07466e3dcb60e47ab5f4489a 290 Gene3D G3DSA:3.30.2140.10 23 274 5.2E-95 T 12-10-2018 JDM601_0190 609c92fb07466e3dcb60e47ab5f4489a 290 PRINTS PR01543 Arylamine N-acetyltransferase signature 192 214 4.8E-5 T 12-10-2018 IPR001447 Arylamine N-acetyltransferase GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 JDM601_0190 609c92fb07466e3dcb60e47ab5f4489a 290 PRINTS PR01543 Arylamine N-acetyltransferase signature 36 59 4.8E-5 T 12-10-2018 IPR001447 Arylamine N-acetyltransferase GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 JDM601_0190 609c92fb07466e3dcb60e47ab5f4489a 290 Gene3D G3DSA:2.40.128.150 101 202 5.2E-95 T 12-10-2018 JDM601_0190 609c92fb07466e3dcb60e47ab5f4489a 290 SUPERFAMILY SSF54001 18 276 2.16E-77 T 12-10-2018 IPR038765 Papain-like cysteine peptidase superfamily JDM601_0190 609c92fb07466e3dcb60e47ab5f4489a 290 Pfam PF00797 N-acetyltransferase 36 275 1.2E-70 T 12-10-2018 IPR001447 Arylamine N-acetyltransferase GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 JDM601_2638 a785e776f21163e9a37976bed92f81dc 195 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 31 54 4.3E-7 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_2638 a785e776f21163e9a37976bed92f81dc 195 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 10 23 4.3E-7 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_2638 a785e776f21163e9a37976bed92f81dc 195 Pfam PF00440 Bacterial regulatory proteins, tetR family 10 56 1.4E-12 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_2638 a785e776f21163e9a37976bed92f81dc 195 Gene3D G3DSA:1.10.357.10 2 189 4.1E-38 T 12-10-2018 JDM601_2638 a785e776f21163e9a37976bed92f81dc 195 SUPERFAMILY SSF48498 77 185 9.78E-21 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily JDM601_2638 a785e776f21163e9a37976bed92f81dc 195 SUPERFAMILY SSF46689 4 78 5.13E-16 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JDM601_1604 705d367cace76e352157613327d06d7f 300 Pfam PF12680 SnoaL-like domain 178 261 2.3E-8 T 12-10-2018 IPR037401 SnoaL-like domain JDM601_1604 705d367cace76e352157613327d06d7f 300 Gene3D G3DSA:3.10.450.50 167 282 1.6E-11 T 12-10-2018 JDM601_1604 705d367cace76e352157613327d06d7f 300 SUPERFAMILY SSF88946 6 93 8.63E-18 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 JDM601_1604 705d367cace76e352157613327d06d7f 300 Pfam PF08281 Sigma-70, region 4 110 160 3.5E-8 T 12-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 JDM601_1604 705d367cace76e352157613327d06d7f 300 SUPERFAMILY SSF54427 172 283 3.47E-16 T 12-10-2018 IPR032710 NTF2-like domain superfamily JDM601_1604 705d367cace76e352157613327d06d7f 300 Gene3D G3DSA:1.10.10.10 111 166 1.2E-7 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JDM601_1604 705d367cace76e352157613327d06d7f 300 Gene3D G3DSA:1.10.1740.10 2 99 2.9E-11 T 12-10-2018 JDM601_1604 705d367cace76e352157613327d06d7f 300 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 6 163 1.5E-19 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 JDM601_1604 705d367cace76e352157613327d06d7f 300 SUPERFAMILY SSF88659 84 164 8.41E-10 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like JDM601_1604 705d367cace76e352157613327d06d7f 300 Pfam PF04542 Sigma-70 region 2 11 75 1.4E-15 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 JDM601_1533 4f531187bb635d683bde62da34b01c40 209 SMART SM01006 37 84 2.7E-13 T 12-10-2018 IPR019432 Siderophore biosynthesis protein, conserved domain JDM601_1533 4f531187bb635d683bde62da34b01c40 209 SUPERFAMILY SSF55729 6 197 3.07E-47 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase JDM601_1533 4f531187bb635d683bde62da34b01c40 209 Pfam PF13523 Acetyltransferase (GNAT) domain 40 185 2.3E-42 T 12-10-2018 JDM601_1533 4f531187bb635d683bde62da34b01c40 209 Gene3D G3DSA:3.40.630.30 1 198 1.7E-55 T 12-10-2018 JDM601_1920 fde584cb86b9267d6d32f007996fc97d 256 Gene3D G3DSA:3.30.70.1880 113 256 5.3E-46 T 12-10-2018 JDM601_1920 fde584cb86b9267d6d32f007996fc97d 256 Pfam PF05949 Bacterial protein of unknown function (DUF881) 115 253 5.4E-33 T 12-10-2018 IPR010273 Protein of unknown function DUF881 JDM601_3384 c366634bc90d6b7bc354e15b2d56177c 420 Pfam PF04909 Amidohydrolase 77 374 6.6E-20 T 12-10-2018 IPR006680 Amidohydrolase-related GO:0016787 JDM601_3384 c366634bc90d6b7bc354e15b2d56177c 420 SUPERFAMILY SSF51556 9 384 1.43E-68 T 12-10-2018 IPR032466 Metal-dependent hydrolase JDM601_3384 c366634bc90d6b7bc354e15b2d56177c 420 Gene3D G3DSA:3.20.20.140 5 374 2.6E-84 T 12-10-2018 JDM601_0795 c783860bf63f2102fe1cc824a072094d 326 Pfam PF06737 Transglycosylase-like domain 39 114 9.6E-35 T 12-10-2018 IPR010618 Transglycosylase-like JDM601_0795 c783860bf63f2102fe1cc824a072094d 326 Gene3D G3DSA:1.10.530.10 9 119 1.4E-35 T 12-10-2018 JDM601_0795 c783860bf63f2102fe1cc824a072094d 326 SUPERFAMILY SSF53955 39 116 5.62E-31 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily JDM601_2331 00ad67d363f86fc542cf0e8bbc43ec23 144 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 3 141 1.9E-59 T 12-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 JDM601_2331 00ad67d363f86fc542cf0e8bbc43ec23 144 Gene3D G3DSA:3.40.50.9100 1 143 7.6E-59 T 12-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 JDM601_2331 00ad67d363f86fc542cf0e8bbc43ec23 144 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 4 141 1.0E-63 T 12-10-2018 JDM601_2331 00ad67d363f86fc542cf0e8bbc43ec23 144 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 144 59.718 T 12-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 JDM601_2331 00ad67d363f86fc542cf0e8bbc43ec23 144 Pfam PF01220 Dehydroquinase class II 3 139 3.6E-53 T 12-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 JDM601_2331 00ad67d363f86fc542cf0e8bbc43ec23 144 SUPERFAMILY SSF52304 3 141 5.89E-53 T 12-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 JDM601_2331 00ad67d363f86fc542cf0e8bbc43ec23 144 PIRSF PIRSF001399 1 144 1.9E-54 T 12-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 JDM601_2331 00ad67d363f86fc542cf0e8bbc43ec23 144 ProSitePatterns PS01029 Dehydroquinase class II signature. 7 24 - T 12-10-2018 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 JDM601_0680 d22d6e461d2d489eede421a80729f255 512 Pfam PF03055 Retinal pigment epithelial membrane protein 22 510 4.9E-102 T 12-10-2018 IPR004294 Carotenoid oxygenase GO:0016702|GO:0055114 JDM601_3864 de8ac7743a8357a273140e1bed01b895 688 Hamap MF_02124 Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase [glgE]. 3 678 44.332 T 12-10-2018 IPR026585 Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase GO:0016757 KEGG: 00500+2.4.99.16|MetaCyc: PWY-7900 JDM601_3864 de8ac7743a8357a273140e1bed01b895 688 Gene3D G3DSA:2.60.40.10 1 122 2.3E-37 T 12-10-2018 IPR013783 Immunoglobulin-like fold JDM601_3864 de8ac7743a8357a273140e1bed01b895 688 SMART SM00642 226 576 0.0014 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 JDM601_3864 de8ac7743a8357a273140e1bed01b895 688 Pfam PF11896 Domain of unknown function (DUF3416) 5 216 7.7E-54 T 12-10-2018 IPR021828 Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase, domain N/S GO:0004553 KEGG: 00500+2.4.99.16|MetaCyc: PWY-7900 JDM601_3864 de8ac7743a8357a273140e1bed01b895 688 Gene3D G3DSA:3.20.20.80 217 587 1.7E-171 T 12-10-2018 JDM601_3864 de8ac7743a8357a273140e1bed01b895 688 SUPERFAMILY SSF51445 210 583 5.37E-82 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily JDM601_3864 de8ac7743a8357a273140e1bed01b895 688 Pfam PF00128 Alpha amylase, catalytic domain 253 354 3.1E-5 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 JDM601_3864 de8ac7743a8357a273140e1bed01b895 688 Gene3D G3DSA:1.20.58.280 123 198 2.1E-25 T 12-10-2018 JDM601_3864 de8ac7743a8357a273140e1bed01b895 688 Gene3D G3DSA:2.60.40.1180 588 687 1.2E-36 T 12-10-2018 IPR013780 Glycosyl hydrolase, all-beta JDM601_4226 799c16fbc513467612b12772b14b1eee 190 Gene3D G3DSA:1.10.357.10 8 190 3.5E-15 T 12-10-2018 JDM601_4226 799c16fbc513467612b12772b14b1eee 190 SUPERFAMILY SSF46689 2 81 2.15E-11 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JDM601_4226 799c16fbc513467612b12772b14b1eee 190 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 58 4.9E-9 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_1243 e8dcb7ff2c3bba817ad396f1bbda1094 153 SMART SM00347 32 135 0.0011 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 JDM601_1243 e8dcb7ff2c3bba817ad396f1bbda1094 153 Pfam PF01047 MarR family 60 97 3.6E-8 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 JDM601_1243 e8dcb7ff2c3bba817ad396f1bbda1094 153 Gene3D G3DSA:1.10.10.10 7 153 2.1E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JDM601_1243 e8dcb7ff2c3bba817ad396f1bbda1094 153 SUPERFAMILY SSF46785 7 149 1.18E-18 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JDM601_0853 139a11eb1fb615ee92c4630847991d51 509 Gene3D G3DSA:3.40.50.12780 7 406 1.9E-113 T 12-10-2018 JDM601_0853 139a11eb1fb615ee92c4630847991d51 509 SUPERFAMILY SSF56801 9 508 2.35E-150 T 12-10-2018 JDM601_0853 139a11eb1fb615ee92c4630847991d51 509 Pfam PF00501 AMP-binding enzyme 20 413 7.5E-102 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 JDM601_0853 139a11eb1fb615ee92c4630847991d51 509 Gene3D G3DSA:3.30.300.310 409 509 3.3E-33 T 12-10-2018 JDM601_0853 139a11eb1fb615ee92c4630847991d51 509 Pfam PF13193 AMP-binding enzyme C-terminal domain 422 498 2.1E-19 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain JDM601_0853 139a11eb1fb615ee92c4630847991d51 509 ProSitePatterns PS00455 Putative AMP-binding domain signature. 166 177 - T 12-10-2018 IPR020845 AMP-binding, conserved site JDM601_3925 aeeed10e52b7637b15d41fcf8b4a798b 99 Pfam PF00934 PE family 1 93 3.7E-29 T 12-10-2018 IPR000084 PE-PGRS family, N-terminal JDM601_3925 aeeed10e52b7637b15d41fcf8b4a798b 99 SUPERFAMILY SSF140459 8 84 5.75E-21 T 12-10-2018 JDM601_3925 aeeed10e52b7637b15d41fcf8b4a798b 99 Gene3D G3DSA:1.10.287.850 1 98 3.6E-30 T 12-10-2018 JDM601_4141 7302450cd67287f307a822a922cead79 141 Pfam PF05423 Mycobacterium membrane protein 4 141 1.3E-54 T 12-10-2018 IPR008693 Transport accessory protein MmpS JDM601_4141 7302450cd67287f307a822a922cead79 141 Gene3D G3DSA:2.60.40.2880 52 141 2.3E-32 T 12-10-2018 IPR038468 Transport accessory protein MmpS, soluble domain superfamily JDM601_1504 558384cb3e71af5ac0db58c7bdf1f10e 285 SMART SM00849 20 223 8.7E-11 T 12-10-2018 IPR001279 Metallo-beta-lactamase JDM601_1504 558384cb3e71af5ac0db58c7bdf1f10e 285 Pfam PF12706 Beta-lactamase superfamily domain 33 246 2.2E-20 T 12-10-2018 IPR001279 Metallo-beta-lactamase JDM601_1504 558384cb3e71af5ac0db58c7bdf1f10e 285 SUPERFAMILY SSF56281 4 280 1.44E-53 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like JDM601_1504 558384cb3e71af5ac0db58c7bdf1f10e 285 Gene3D G3DSA:3.60.15.10 3 284 1.4E-64 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like JDM601_1504 558384cb3e71af5ac0db58c7bdf1f10e 285 Hamap MF_01818 Ribonuclease BN [rbn]. 3 281 22.152 T 12-10-2018 IPR013471 Ribonuclease Z/BN GO:0016891|GO:0042779 JDM601_1437 07fac9acc2bb34fde37bcb01316a2a41 366 SUPERFAMILY SSF56317 4 106 7.72E-19 T 12-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily JDM601_1437 07fac9acc2bb34fde37bcb01316a2a41 366 Gene3D G3DSA:3.60.110.10 160 348 4.7E-9 T 12-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily JDM601_1437 07fac9acc2bb34fde37bcb01316a2a41 366 SUPERFAMILY SSF56317 163 323 1.83E-14 T 12-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily JDM601_1437 07fac9acc2bb34fde37bcb01316a2a41 366 Pfam PF00795 Carbon-nitrogen hydrolase 5 89 1.9E-13 T 12-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 JDM601_1437 07fac9acc2bb34fde37bcb01316a2a41 366 Gene3D G3DSA:3.60.110.10 4 112 1.3E-17 T 12-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily JDM601_2079 62be5dfffc0b54aa6d6d7588eab6f2bc 280 Pfam PF00106 short chain dehydrogenase 10 205 7.2E-33 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2079 62be5dfffc0b54aa6d6d7588eab6f2bc 280 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 185 7.5E-11 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2079 62be5dfffc0b54aa6d6d7588eab6f2bc 280 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 7.5E-11 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2079 62be5dfffc0b54aa6d6d7588eab6f2bc 280 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 91 102 7.5E-11 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2079 62be5dfffc0b54aa6d6d7588eab6f2bc 280 Gene3D G3DSA:3.40.50.720 3 275 5.2E-67 T 12-10-2018 JDM601_2079 62be5dfffc0b54aa6d6d7588eab6f2bc 280 SUPERFAMILY SSF51735 5 245 6.18E-50 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_1581 6609c01e96378dec314da5ffc4f10e3e 225 SUPERFAMILY SSF46689 2 83 3.8E-19 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JDM601_1581 6609c01e96378dec314da5ffc4f10e3e 225 SUPERFAMILY SSF48498 81 205 5.01E-16 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily JDM601_1581 6609c01e96378dec314da5ffc4f10e3e 225 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 59 2.3E-14 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_1581 6609c01e96378dec314da5ffc4f10e3e 225 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 14 27 1.3E-11 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_1581 6609c01e96378dec314da5ffc4f10e3e 225 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 35 58 1.3E-11 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_1581 6609c01e96378dec314da5ffc4f10e3e 225 Gene3D G3DSA:1.10.357.10 1 210 2.4E-42 T 12-10-2018 JDM601_2455 636861d2fe61daa67fb5eeba3c290096 327 Gene3D G3DSA:3.40.50.10900 12 243 1.2E-80 T 12-10-2018 IPR038389 Proteasome assembly chaperone 2 superfamily JDM601_2455 636861d2fe61daa67fb5eeba3c290096 327 SUPERFAMILY SSF159659 22 287 1.57E-86 T 12-10-2018 JDM601_2455 636861d2fe61daa67fb5eeba3c290096 327 Pfam PF09754 PAC2 family 46 262 1.0E-43 T 12-10-2018 IPR019151 Proteasome assembly chaperone 2 JDM601_2455 636861d2fe61daa67fb5eeba3c290096 327 PIRSF PIRSF028754 23 326 6.8E-127 T 12-10-2018 IPR008492 Protein of unknown function DUF774 JDM601_2455 636861d2fe61daa67fb5eeba3c290096 327 Gene3D G3DSA:1.10.287.100 244 286 1.5E-18 T 12-10-2018 JDM601_1470 9095fa4b2960174c80e0b0f6b733259e 239 Gene3D G3DSA:3.40.50.1820 8 203 3.2E-10 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_1470 9095fa4b2960174c80e0b0f6b733259e 239 SUPERFAMILY SSF53474 3 169 2.82E-8 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_1470 9095fa4b2960174c80e0b0f6b733259e 239 Pfam PF08237 PE-PPE domain 32 215 1.9E-22 T 12-10-2018 IPR013228 PE-PPE, C-terminal JDM601_3392 ea1f487f5d9862cbe851c8d0585b7060 279 Pfam PF00378 Enoyl-CoA hydratase/isomerase 20 272 2.2E-50 T 12-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 JDM601_3392 ea1f487f5d9862cbe851c8d0585b7060 279 Gene3D G3DSA:3.90.226.10 12 273 9.5E-74 T 12-10-2018 JDM601_3392 ea1f487f5d9862cbe851c8d0585b7060 279 SUPERFAMILY SSF52096 15 274 1.04E-75 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily JDM601_2534 5be352369aa43129efc7d355bc7a19b3 437 SUPERFAMILY SSF63411 13 217 3.32E-57 T 12-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 JDM601_2534 5be352369aa43129efc7d355bc7a19b3 437 Pfam PF00675 Insulinase (Peptidase family M16) 24 170 7.3E-32 T 12-10-2018 IPR011765 Peptidase M16, N-terminal JDM601_2534 5be352369aa43129efc7d355bc7a19b3 437 Pfam PF05193 Peptidase M16 inactive domain 179 353 3.2E-41 T 12-10-2018 IPR007863 Peptidase M16, C-terminal JDM601_2534 5be352369aa43129efc7d355bc7a19b3 437 Gene3D G3DSA:3.30.830.10 15 222 7.6E-70 T 12-10-2018 JDM601_2534 5be352369aa43129efc7d355bc7a19b3 437 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 45 68 - T 12-10-2018 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 JDM601_2534 5be352369aa43129efc7d355bc7a19b3 437 SUPERFAMILY SSF63411 240 423 6.0E-44 T 12-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 JDM601_2534 5be352369aa43129efc7d355bc7a19b3 437 Gene3D G3DSA:3.30.830.10 244 426 5.3E-51 T 12-10-2018 JDM601_0989 c3bdc3eb9d28d062bd976e5ef98abfff 218 Pfam PF04977 Septum formation initiator 78 153 1.4E-15 T 12-10-2018 IPR007060 Septum formation initiator FtsL/DivIC JDM601_3904 61e47e99a3b517458339b1ee4a47b0da 248 Gene3D G3DSA:3.30.70.2970 56 165 3.8E-51 T 12-10-2018 JDM601_3904 61e47e99a3b517458339b1ee4a47b0da 248 Pfam PF04402 Protein of unknown function (DUF541) 44 245 4.3E-44 T 12-10-2018 IPR007497 Protein of unknown function DUF541 JDM601_3904 61e47e99a3b517458339b1ee4a47b0da 248 Gene3D G3DSA:3.30.110.170 46 246 3.8E-51 T 12-10-2018 JDM601_2339 e97bbdac408b51f9a76e28f51f348265 417 Pfam PF02618 YceG-like family 86 405 1.1E-55 T 12-10-2018 IPR003770 Endolytic murein transglycosylase JDM601_2339 e97bbdac408b51f9a76e28f51f348265 417 Hamap MF_02065 Endolytic murein transglycosylase [mltG]. 51 417 25.697 T 12-10-2018 IPR003770 Endolytic murein transglycosylase JDM601_1477 151e77c6c8e52619cd4cdac449301e2f 131 Gene3D G3DSA:3.30.429.10 3 131 6.1E-40 T 12-10-2018 IPR014347 Tautomerase/MIF superfamily JDM601_1477 151e77c6c8e52619cd4cdac449301e2f 131 SUPERFAMILY SSF55331 2 120 3.49E-29 T 12-10-2018 IPR014347 Tautomerase/MIF superfamily JDM601_1477 151e77c6c8e52619cd4cdac449301e2f 131 Pfam PF14552 Tautomerase enzyme 38 115 4.0E-19 T 12-10-2018 IPR037479 Tautomerase, MSAD family JDM601_1492 e7565b5a7de9f51f8c0e8c2b149140dd 971 Pfam PF03176 MMPL family 62 390 6.7E-95 T 12-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 JDM601_1492 e7565b5a7de9f51f8c0e8c2b149140dd 971 Pfam PF03176 MMPL family 610 941 3.8E-83 T 12-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 JDM601_1492 e7565b5a7de9f51f8c0e8c2b149140dd 971 SUPERFAMILY SSF82866 162 358 2.22E-26 T 12-10-2018 JDM601_1492 e7565b5a7de9f51f8c0e8c2b149140dd 971 SUPERFAMILY SSF82866 736 937 4.05E-27 T 12-10-2018 JDM601_1492 e7565b5a7de9f51f8c0e8c2b149140dd 971 TIGRFAM TIGR00833 actII: transport protein 29 937 5.5E-267 T 12-10-2018 IPR004707 Membrane transport protein MmpL family GO:0016021 JDM601_4078 6427c511d7e95ad1819ac14e797a10c9 398 Gene3D G3DSA:3.40.640.10 28 284 4.2E-121 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 JDM601_4078 6427c511d7e95ad1819ac14e797a10c9 398 SUPERFAMILY SSF53383 3 396 4.35E-56 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase JDM601_4078 6427c511d7e95ad1819ac14e797a10c9 398 Gene3D G3DSA:3.90.1150.10 18 394 4.2E-121 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 JDM601_4078 6427c511d7e95ad1819ac14e797a10c9 398 TIGRFAM TIGR01976 am_tr_V_VC1184: cysteine desulfurase family protein 3 394 8.0E-134 T 12-10-2018 IPR011340 Cysteine desulfurase-related JDM601_4078 6427c511d7e95ad1819ac14e797a10c9 398 Pfam PF00266 Aminotransferase class-V 25 390 5.7E-29 T 12-10-2018 IPR000192 Aminotransferase class V domain JDM601_3807 ecc07702e7ee748b242ee1283194efa0 866 Gene3D G3DSA:3.50.30.10 763 866 2.2E-29 T 12-10-2018 JDM601_3807 ecc07702e7ee748b242ee1283194efa0 866 Gene3D G3DSA:3.40.50.720 1 301 1.7E-50 T 12-10-2018 JDM601_3807 ecc07702e7ee748b242ee1283194efa0 866 SUPERFAMILY SSF51735 1 294 4.64E-50 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_3807 ecc07702e7ee748b242ee1283194efa0 866 Pfam PF01370 NAD dependent epimerase/dehydratase family 1 207 4.5E-23 T 12-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 JDM601_3807 ecc07702e7ee748b242ee1283194efa0 866 SUPERFAMILY SSF52009 760 863 1.7E-25 T 12-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 JDM601_3807 ecc07702e7ee748b242ee1283194efa0 866 Pfam PF00391 PEP-utilising enzyme, mobile domain 789 860 8.1E-21 T 12-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 JDM601_2145 0896435c1a34416a2f58f82c44f4ef34 204 SUPERFAMILY SSF54211 90 189 7.84E-28 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold JDM601_2145 0896435c1a34416a2f58f82c44f4ef34 204 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 5 204 41.514 T 12-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 JDM601_2145 0896435c1a34416a2f58f82c44f4ef34 204 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 34 184 1.5E-57 T 12-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 JDM601_2145 0896435c1a34416a2f58f82c44f4ef34 204 Gene3D G3DSA:3.30.230.40 93 204 1.6E-36 T 12-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 JDM601_2145 0896435c1a34416a2f58f82c44f4ef34 204 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 64 77 - T 12-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 JDM601_2145 0896435c1a34416a2f58f82c44f4ef34 204 SUPERFAMILY SSF54211 5 89 6.07E-32 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold JDM601_2145 0896435c1a34416a2f58f82c44f4ef34 204 Gene3D G3DSA:3.30.230.40 1 92 2.1E-37 T 12-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 JDM601_2145 0896435c1a34416a2f58f82c44f4ef34 204 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 166 178 - T 12-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 JDM601_1808 fa3f366aa2cab58d9b38d64ddc9ca819 179 Pfam PF04167 Protein of unknown function (DUF402) 50 117 1.9E-17 T 12-10-2018 IPR007295 Domain of unknown function DUF402 JDM601_1808 fa3f366aa2cab58d9b38d64ddc9ca819 179 Gene3D G3DSA:2.40.380.10 1 162 1.1E-72 T 12-10-2018 IPR035930 FomD-like superfamily JDM601_1808 fa3f366aa2cab58d9b38d64ddc9ca819 179 PIRSF PIRSF012622 1 174 6.4E-73 T 12-10-2018 IPR014465 Uncharacterised conserved protein UCP012622 JDM601_1808 fa3f366aa2cab58d9b38d64ddc9ca819 179 SUPERFAMILY SSF159234 2 166 1.83E-51 T 12-10-2018 IPR035930 FomD-like superfamily JDM601_1975 13d9db2ed116b3cc4c863d1d3a810fd3 192 Pfam PF04264 YceI-like domain 8 183 1.1E-15 T 12-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like JDM601_1975 13d9db2ed116b3cc4c863d1d3a810fd3 192 SUPERFAMILY SSF101874 23 184 3.66E-23 T 12-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily JDM601_1975 13d9db2ed116b3cc4c863d1d3a810fd3 192 Gene3D G3DSA:2.40.128.110 6 188 1.9E-26 T 12-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily JDM601_1975 13d9db2ed116b3cc4c863d1d3a810fd3 192 SMART SM00867 13 185 2.5E-9 T 12-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like JDM601_1686 316efd0efedcd0f4095da2c178a55536 234 TIGRFAM TIGR00214 lipB: lipoyl(octanoyl) transferase 40 195 1.4E-37 T 12-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 JDM601_1686 316efd0efedcd0f4095da2c178a55536 234 Pfam PF03099 Biotin/lipoate A/B protein ligase family 68 171 4.0E-10 T 12-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 JDM601_1686 316efd0efedcd0f4095da2c178a55536 234 SUPERFAMILY SSF55681 9 219 9.11E-66 T 12-10-2018 JDM601_1686 316efd0efedcd0f4095da2c178a55536 234 Gene3D G3DSA:3.30.930.10 4 217 4.6E-79 T 12-10-2018 JDM601_1686 316efd0efedcd0f4095da2c178a55536 234 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 82 134 1.0E-19 T 12-10-2018 JDM601_1686 316efd0efedcd0f4095da2c178a55536 234 Hamap MF_00013 Octanoyltransferase [lipB]. 10 219 33.78 T 12-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 JDM601_1686 316efd0efedcd0f4095da2c178a55536 234 ProSitePatterns PS01313 Lipoate-protein ligase B signature. 78 93 - T 12-10-2018 IPR020605 Octanoyltransferase, conserved site GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 JDM601_1686 316efd0efedcd0f4095da2c178a55536 234 PIRSF PIRSF016262 7 228 3.2E-62 T 12-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 JDM601_3913 9ac2bd73af0ac2cac95aa66531454a41 331 Pfam PF03741 Integral membrane protein TerC family 69 275 4.9E-48 T 12-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 JDM601_3913 9ac2bd73af0ac2cac95aa66531454a41 331 TIGRFAM TIGR03718 R_switched_Alx: integral membrane protein, TerC family 5 321 1.9E-102 T 12-10-2018 IPR022369 Integral membrane protein TerC, riboswitch-linked GO:0016021 JDM601_4137 6ea39d10e2516a95ae32ca89138b40b2 192 Pfam PF00440 Bacterial regulatory proteins, tetR family 19 62 8.7E-11 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_4137 6ea39d10e2516a95ae32ca89138b40b2 192 Gene3D G3DSA:1.10.357.10 59 191 1.6E-18 T 12-10-2018 JDM601_4137 6ea39d10e2516a95ae32ca89138b40b2 192 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 17 30 1.5E-5 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_4137 6ea39d10e2516a95ae32ca89138b40b2 192 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 38 61 1.5E-5 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_4137 6ea39d10e2516a95ae32ca89138b40b2 192 Gene3D G3DSA:1.10.10.60 6 58 1.8E-17 T 12-10-2018 JDM601_4137 6ea39d10e2516a95ae32ca89138b40b2 192 ProSitePatterns PS01081 TetR-type HTH domain signature. 29 60 - T 12-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site JDM601_4137 6ea39d10e2516a95ae32ca89138b40b2 192 SUPERFAMILY SSF46689 2 79 4.44E-18 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JDM601_3485 dad310374dd28bd5f911ed5038ae6892 338 SUPERFAMILY SSF47203 197 334 1.77E-33 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 JDM601_3485 dad310374dd28bd5f911ed5038ae6892 338 Gene3D G3DSA:1.20.140.10 194 336 2.3E-31 T 12-10-2018 JDM601_3485 dad310374dd28bd5f911ed5038ae6892 338 Gene3D G3DSA:1.10.540.10 3 104 2.2E-9 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 JDM601_3485 dad310374dd28bd5f911ed5038ae6892 338 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 200 333 1.7E-25 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 JDM601_3485 dad310374dd28bd5f911ed5038ae6892 338 SUPERFAMILY SSF56645 1 185 3.53E-15 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 JDM601_0948 ca537a845d7b6c02de21a78b91a9d439 406 SUPERFAMILY SSF48264 7 404 5.37E-74 T 12-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_0948 ca537a845d7b6c02de21a78b91a9d439 406 PRINTS PR00359 B-class P450 signature 281 292 3.4E-32 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_0948 ca537a845d7b6c02de21a78b91a9d439 406 PRINTS PR00359 B-class P450 signature 141 157 3.4E-32 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_0948 ca537a845d7b6c02de21a78b91a9d439 406 PRINTS PR00359 B-class P450 signature 95 106 3.4E-32 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_0948 ca537a845d7b6c02de21a78b91a9d439 406 PRINTS PR00359 B-class P450 signature 326 341 3.4E-32 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_0948 ca537a845d7b6c02de21a78b91a9d439 406 PRINTS PR00359 B-class P450 signature 357 368 3.4E-32 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_0948 ca537a845d7b6c02de21a78b91a9d439 406 PRINTS PR00359 B-class P450 signature 158 173 3.4E-32 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_0948 ca537a845d7b6c02de21a78b91a9d439 406 PRINTS PR00359 B-class P450 signature 201 223 3.4E-32 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_0948 ca537a845d7b6c02de21a78b91a9d439 406 PRINTS PR00359 B-class P450 signature 298 325 3.4E-32 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_0948 ca537a845d7b6c02de21a78b91a9d439 406 PRINTS PR00359 B-class P450 signature 348 357 3.4E-32 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_0948 ca537a845d7b6c02de21a78b91a9d439 406 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 350 359 - T 12-10-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 JDM601_0948 ca537a845d7b6c02de21a78b91a9d439 406 Gene3D G3DSA:1.10.630.10 4 406 8.6E-98 T 12-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_0948 ca537a845d7b6c02de21a78b91a9d439 406 Pfam PF00067 Cytochrome P450 263 381 7.7E-19 T 12-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_3973 be826878fe9224e41e8e941d368afeca 330 Pfam PF01944 Stage II sporulation protein M 108 281 2.5E-31 T 12-10-2018 IPR002798 Stage II sporulation protein M-like JDM601_1106 a3617c8f5bc9a2cefab85d6046e2c77f 400 Pfam PF00067 Cytochrome P450 183 371 1.2E-19 T 12-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_1106 a3617c8f5bc9a2cefab85d6046e2c77f 400 Gene3D G3DSA:1.10.630.10 4 400 7.8E-111 T 12-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_1106 a3617c8f5bc9a2cefab85d6046e2c77f 400 SUPERFAMILY SSF48264 12 398 2.88E-80 T 12-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_1106 a3617c8f5bc9a2cefab85d6046e2c77f 400 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 343 352 - T 12-10-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 JDM601_1106 a3617c8f5bc9a2cefab85d6046e2c77f 400 PRINTS PR00359 B-class P450 signature 350 361 8.5E-39 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_1106 a3617c8f5bc9a2cefab85d6046e2c77f 400 PRINTS PR00359 B-class P450 signature 150 165 8.5E-39 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_1106 a3617c8f5bc9a2cefab85d6046e2c77f 400 PRINTS PR00359 B-class P450 signature 341 350 8.5E-39 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_1106 a3617c8f5bc9a2cefab85d6046e2c77f 400 PRINTS PR00359 B-class P450 signature 276 287 8.5E-39 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_1106 a3617c8f5bc9a2cefab85d6046e2c77f 400 PRINTS PR00359 B-class P450 signature 321 336 8.5E-39 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_1106 a3617c8f5bc9a2cefab85d6046e2c77f 400 PRINTS PR00359 B-class P450 signature 133 149 8.5E-39 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_1106 a3617c8f5bc9a2cefab85d6046e2c77f 400 PRINTS PR00359 B-class P450 signature 87 98 8.5E-39 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_1106 a3617c8f5bc9a2cefab85d6046e2c77f 400 PRINTS PR00359 B-class P450 signature 190 212 8.5E-39 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_1106 a3617c8f5bc9a2cefab85d6046e2c77f 400 PRINTS PR00359 B-class P450 signature 293 320 8.5E-39 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_1106 a3617c8f5bc9a2cefab85d6046e2c77f 400 PRINTS PR00385 P450 superfamily signature 341 350 7.1E-7 T 12-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_1106 a3617c8f5bc9a2cefab85d6046e2c77f 400 PRINTS PR00385 P450 superfamily signature 241 258 7.1E-7 T 12-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_1106 a3617c8f5bc9a2cefab85d6046e2c77f 400 PRINTS PR00385 P450 superfamily signature 276 287 7.1E-7 T 12-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_1106 a3617c8f5bc9a2cefab85d6046e2c77f 400 PRINTS PR00385 P450 superfamily signature 350 361 7.1E-7 T 12-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_0906 efe680b5818d1d906c33a028f6862134 591 Pfam PF07969 Amidohydrolase family 47 199 4.6E-13 T 12-10-2018 IPR013108 Amidohydrolase 3 JDM601_0906 efe680b5818d1d906c33a028f6862134 591 Gene3D G3DSA:3.20.20.140 58 274 2.3E-44 T 12-10-2018 JDM601_0906 efe680b5818d1d906c33a028f6862134 591 Gene3D G3DSA:2.30.40.10 474 584 2.3E-5 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 JDM601_0906 efe680b5818d1d906c33a028f6862134 591 SUPERFAMILY SSF51338 3 570 7.7E-17 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 JDM601_0906 efe680b5818d1d906c33a028f6862134 591 SUPERFAMILY SSF51556 59 502 3.82E-46 T 12-10-2018 IPR032466 Metal-dependent hydrolase JDM601_3472 d9528a70a9d677fad96e275410f450b7 342 TIGRFAM TIGR00996 Mtu_fam_mce: virulence factor Mce family protein 12 293 4.7E-59 T 12-10-2018 IPR005693 Virulence factor Mce protein JDM601_3472 d9528a70a9d677fad96e275410f450b7 342 Pfam PF02470 MlaD protein 40 113 8.5E-15 T 12-10-2018 IPR003399 Mce/MlaD JDM601_1017 bef434b5e40b00a34732cfa7d46ec30a 345 Gene3D G3DSA:3.90.226.40 1 345 2.0E-135 T 12-10-2018 JDM601_1017 bef434b5e40b00a34732cfa7d46ec30a 345 SUPERFAMILY SSF52096 5 322 1.83E-62 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily JDM601_1017 bef434b5e40b00a34732cfa7d46ec30a 345 Pfam PF16113 Enoyl-CoA hydratase/isomerase 16 336 2.1E-119 T 12-10-2018 IPR032259 Enoyl-CoA hydratase/isomerase, HIBYL-CoA-H type GO:0003860 Reactome: R-HSA-70895 JDM601_4130 1b010cc28bb6cbdce5cd66c4b41e8c3b 280 SUPERFAMILY SSF56784 14 278 8.42E-61 T 12-10-2018 IPR036412 HAD-like superfamily JDM601_4130 1b010cc28bb6cbdce5cd66c4b41e8c3b 280 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 14 247 2.9E-22 T 12-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 JDM601_4130 1b010cc28bb6cbdce5cd66c4b41e8c3b 280 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 14 274 7.9E-46 T 12-10-2018 IPR000150 Cof family GO:0016787 JDM601_4130 1b010cc28bb6cbdce5cd66c4b41e8c3b 280 Pfam PF08282 haloacid dehalogenase-like hydrolase 15 274 4.9E-56 T 12-10-2018 JDM601_4130 1b010cc28bb6cbdce5cd66c4b41e8c3b 280 Gene3D G3DSA:3.40.50.1000 14 275 2.4E-60 T 12-10-2018 IPR023214 HAD superfamily JDM601_4130 1b010cc28bb6cbdce5cd66c4b41e8c3b 280 Gene3D G3DSA:3.30.1240.10 93 203 2.4E-60 T 12-10-2018 JDM601_2995 34bf2ef262ab2dc5efe5f60a6110b611 424 Gene3D G3DSA:3.40.50.2000 17 413 4.7E-79 T 12-10-2018 JDM601_2995 34bf2ef262ab2dc5efe5f60a6110b611 424 Pfam PF13579 Glycosyl transferase 4-like domain 26 223 2.8E-25 T 12-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 JDM601_2995 34bf2ef262ab2dc5efe5f60a6110b611 424 SUPERFAMILY SSF53756 15 418 8.7E-80 T 12-10-2018 JDM601_2995 34bf2ef262ab2dc5efe5f60a6110b611 424 Gene3D G3DSA:3.40.50.2000 224 396 4.7E-79 T 12-10-2018 JDM601_2995 34bf2ef262ab2dc5efe5f60a6110b611 424 Pfam PF00534 Glycosyl transferases group 1 239 395 5.6E-26 T 12-10-2018 IPR001296 Glycosyl transferase, family 1 JDM601_0670 1c649597c15b31ec4c3247287ae768e0 178 Gene3D G3DSA:1.20.120.450 49 170 9.9E-6 T 12-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes JDM601_0670 1c649597c15b31ec4c3247287ae768e0 178 SUPERFAMILY SSF109854 6 166 3.43E-18 T 12-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes JDM601_0670 1c649597c15b31ec4c3247287ae768e0 178 Pfam PF12867 DinB superfamily 11 159 6.3E-16 T 12-10-2018 IPR024775 DinB-like domain JDM601_2592 18043fdb9af067642d00995994b72478 314 SMART SM00342 190 276 4.4E-10 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 JDM601_2592 18043fdb9af067642d00995994b72478 314 Gene3D G3DSA:1.10.10.60 174 281 1.7E-17 T 12-10-2018 JDM601_2592 18043fdb9af067642d00995994b72478 314 Pfam PF12833 Helix-turn-helix domain 194 276 1.2E-15 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 JDM601_1381 9221ce469573f8e95bfff84f0f66310f 413 Pfam PF07690 Major Facilitator Superfamily 6 351 6.0E-30 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 JDM601_1381 9221ce469573f8e95bfff84f0f66310f 413 Gene3D G3DSA:1.20.1250.20 197 397 4.8E-12 T 12-10-2018 JDM601_1381 9221ce469573f8e95bfff84f0f66310f 413 SUPERFAMILY SSF103473 4 390 1.15E-40 T 12-10-2018 IPR036259 MFS transporter superfamily JDM601_1381 9221ce469573f8e95bfff84f0f66310f 413 Gene3D G3DSA:1.20.1250.20 1 184 1.9E-23 T 12-10-2018 JDM601_3967 ea12ff5ffdf56a16402242ad55df1ea8 154 Pfam PF09424 Yqey-like protein 5 154 1.3E-46 T 12-10-2018 IPR019004 Uncharacterised protein YqeY/AIM41 JDM601_3967 ea12ff5ffdf56a16402242ad55df1ea8 154 Gene3D G3DSA:1.10.1510.10 2 93 2.2E-25 T 12-10-2018 JDM601_3967 ea12ff5ffdf56a16402242ad55df1ea8 154 SUPERFAMILY SSF89095 4 154 1.36E-32 T 12-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 JDM601_3967 ea12ff5ffdf56a16402242ad55df1ea8 154 Gene3D G3DSA:1.10.10.410 94 154 9.2E-11 T 12-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal JDM601_2274 d382b245834e2435ea447bb3bc4d5866 261 Pfam PF00121 Triosephosphate isomerase 6 251 5.3E-88 T 12-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 JDM601_2274 d382b245834e2435ea447bb3bc4d5866 261 SUPERFAMILY SSF51351 1 252 2.09E-89 T 12-10-2018 IPR035990 Triosephosphate isomerase superfamily GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 JDM601_2274 d382b245834e2435ea447bb3bc4d5866 261 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 6 244 9.2E-58 T 12-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 JDM601_2274 d382b245834e2435ea447bb3bc4d5866 261 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 3 254 59.663 T 12-10-2018 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 JDM601_2274 d382b245834e2435ea447bb3bc4d5866 261 Gene3D G3DSA:3.20.20.70 1 260 5.5E-107 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JDM601_2274 d382b245834e2435ea447bb3bc4d5866 261 ProSitePatterns PS00171 Triosephosphate isomerase active site. 170 180 - T 12-10-2018 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 JDM601_0769 a622a6d78074c44ed92ee55604e33325 849 SUPERFAMILY SSF53335 349 849 2.45E-36 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JDM601_0769 a622a6d78074c44ed92ee55604e33325 849 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 843 849 - T 12-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 JDM601_0769 a622a6d78074c44ed92ee55604e33325 849 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 840 849 2.4E-9 T 12-10-2018 JDM601_0769 a622a6d78074c44ed92ee55604e33325 849 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 543 559 2.4E-9 T 12-10-2018 JDM601_0769 a622a6d78074c44ed92ee55604e33325 849 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 592 606 2.4E-9 T 12-10-2018 JDM601_3222 ac443e71c996d8812ca1173232a42ce9 378 SUPERFAMILY SSF51412 9 374 4.58E-60 T 12-10-2018 JDM601_3222 ac443e71c996d8812ca1173232a42ce9 378 TIGRFAM TIGR01304 IMP_DH_rel_2: IMP dehydrogenase family protein 5 376 3.9E-185 T 12-10-2018 IPR005992 IMP dehydrogenase-related 2 GO:0016491|GO:0055114 JDM601_3222 ac443e71c996d8812ca1173232a42ce9 378 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 19 305 3.5E-34 T 12-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 JDM601_3222 ac443e71c996d8812ca1173232a42ce9 378 Gene3D G3DSA:3.20.20.70 16 377 2.8E-86 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JDM601_3222 ac443e71c996d8812ca1173232a42ce9 378 SMART SM01240 18 377 5.9E-15 T 12-10-2018 JDM601_0505 9f56f962de915c01ffb41215579a3da1 299 PRINTS PR00151 Porphobilinogen deaminase signature 59 78 5.9E-22 T 12-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 JDM601_0505 9f56f962de915c01ffb41215579a3da1 299 PRINTS PR00151 Porphobilinogen deaminase signature 126 143 5.9E-22 T 12-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 JDM601_0505 9f56f962de915c01ffb41215579a3da1 299 PRINTS PR00151 Porphobilinogen deaminase signature 107 124 5.9E-22 T 12-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 JDM601_0505 9f56f962de915c01ffb41215579a3da1 299 PRINTS PR00151 Porphobilinogen deaminase signature 213 230 5.9E-22 T 12-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 JDM601_0505 9f56f962de915c01ffb41215579a3da1 299 Gene3D G3DSA:3.40.190.10 83 182 1.7E-63 T 12-10-2018 JDM601_0505 9f56f962de915c01ffb41215579a3da1 299 SUPERFAMILY SSF54782 203 297 1.19E-19 T 12-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 JDM601_0505 9f56f962de915c01ffb41215579a3da1 299 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 2 194 5.5E-57 T 12-10-2018 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 JDM601_0505 9f56f962de915c01ffb41215579a3da1 299 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 214 230 - T 12-10-2018 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 JDM601_0505 9f56f962de915c01ffb41215579a3da1 299 Gene3D G3DSA:3.40.190.10 2 198 1.7E-63 T 12-10-2018 JDM601_0505 9f56f962de915c01ffb41215579a3da1 299 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 2 287 2.0E-81 T 12-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 JDM601_0505 9f56f962de915c01ffb41215579a3da1 299 PIRSF PIRSF001438 1 299 4.9E-97 T 12-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 JDM601_0505 9f56f962de915c01ffb41215579a3da1 299 Gene3D G3DSA:3.30.160.40 204 297 1.2E-23 T 12-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 JDM601_0505 9f56f962de915c01ffb41215579a3da1 299 SUPERFAMILY SSF53850 2 201 1.84E-58 T 12-10-2018 JDM601_0505 9f56f962de915c01ffb41215579a3da1 299 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 210 287 7.8E-21 T 12-10-2018 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 JDM601_1131 dbbc6a25fbc52718eaaea6145e763e87 453 Gene3D G3DSA:3.30.70.2450 133 216 1.0E-65 T 12-10-2018 JDM601_1131 dbbc6a25fbc52718eaaea6145e763e87 453 Pfam PF01494 FAD binding domain 1 292 2.5E-49 T 12-10-2018 IPR002938 FAD-binding domain GO:0071949 JDM601_1131 dbbc6a25fbc52718eaaea6145e763e87 453 SUPERFAMILY SSF51905 1 323 1.12E-46 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_1131 dbbc6a25fbc52718eaaea6145e763e87 453 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 227 242 8.3E-27 T 12-10-2018 JDM601_1131 dbbc6a25fbc52718eaaea6145e763e87 453 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 278 294 8.3E-27 T 12-10-2018 JDM601_1131 dbbc6a25fbc52718eaaea6145e763e87 453 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 104 119 8.3E-27 T 12-10-2018 JDM601_1131 dbbc6a25fbc52718eaaea6145e763e87 453 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 260 278 8.3E-27 T 12-10-2018 JDM601_1131 dbbc6a25fbc52718eaaea6145e763e87 453 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 242 258 8.3E-27 T 12-10-2018 JDM601_1131 dbbc6a25fbc52718eaaea6145e763e87 453 Gene3D G3DSA:3.50.50.60 1 288 1.0E-65 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_0123 59c5ee4423b948185f7f40e253275f8d 342 TIGRFAM TIGR00996 Mtu_fam_mce: virulence factor Mce family protein 9 266 8.2E-73 T 12-10-2018 IPR005693 Virulence factor Mce protein JDM601_0123 59c5ee4423b948185f7f40e253275f8d 342 Pfam PF11887 Cholesterol uptake porter CUP1 of Mce4, putative 148 268 1.0E-6 T 12-10-2018 IPR024516 Mammalian cell entry, C-terminal JDM601_0123 59c5ee4423b948185f7f40e253275f8d 342 Pfam PF02470 MlaD protein 36 112 5.5E-17 T 12-10-2018 IPR003399 Mce/MlaD JDM601_4282 cf0ef2537e9d11c77f7257fd7402f5b4 471 Pfam PF02470 MlaD protein 24 96 3.3E-13 T 12-10-2018 IPR003399 Mce/MlaD JDM601_4282 cf0ef2537e9d11c77f7257fd7402f5b4 471 Pfam PF11887 Cholesterol uptake porter CUP1 of Mce4, putative 151 275 2.6E-7 T 12-10-2018 IPR024516 Mammalian cell entry, C-terminal JDM601_4282 cf0ef2537e9d11c77f7257fd7402f5b4 471 TIGRFAM TIGR00996 Mtu_fam_mce: virulence factor Mce family protein 2 289 2.0E-66 T 12-10-2018 IPR005693 Virulence factor Mce protein JDM601_0185 e16c821425a85647d92d8cab2db9b0b7 242 Pfam PF07859 alpha/beta hydrolase fold 17 214 3.0E-59 T 12-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 JDM601_0185 e16c821425a85647d92d8cab2db9b0b7 242 SUPERFAMILY SSF53474 1 235 2.1E-59 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_0185 e16c821425a85647d92d8cab2db9b0b7 242 Gene3D G3DSA:3.40.50.1820 1 241 5.6E-74 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_0922 acc0675b89771b65af4a98c8a222e3e8 304 Pfam PF09995 Uncharacterized protein conserved in bacteria (DUF2236) 40 271 2.7E-49 T 12-10-2018 IPR018713 Domain of unknown function DUF2236 JDM601_0205 8b1c5b706b067b65f373aa466eac70f3 401 Pfam PF01757 Acyltransferase family 24 359 5.6E-29 T 12-10-2018 IPR002656 Acyltransferase 3 GO:0016747 JDM601_3690 8d93965ee50e4dfb3a44f127acadc0f8 387 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 118 1.9E-22 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 JDM601_3690 8d93965ee50e4dfb3a44f127acadc0f8 387 Gene3D G3DSA:1.20.140.10 232 386 2.4E-22 T 12-10-2018 JDM601_3690 8d93965ee50e4dfb3a44f127acadc0f8 387 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 228 378 4.4E-21 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 JDM601_3690 8d93965ee50e4dfb3a44f127acadc0f8 387 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 122 210 1.1E-19 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 JDM601_3690 8d93965ee50e4dfb3a44f127acadc0f8 387 Gene3D G3DSA:1.10.540.10 2 117 1.4E-28 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 JDM601_3690 8d93965ee50e4dfb3a44f127acadc0f8 387 SUPERFAMILY SSF56645 4 241 2.49E-70 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 JDM601_3690 8d93965ee50e4dfb3a44f127acadc0f8 387 Gene3D G3DSA:2.40.110.10 121 231 3.0E-35 T 12-10-2018 JDM601_3690 8d93965ee50e4dfb3a44f127acadc0f8 387 SUPERFAMILY SSF47203 228 378 6.47E-14 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 JDM601_0030 d50fcaf74c4650a3bf1b9dd874fea4c8 304 SUPERFAMILY SSF53474 3 296 5.27E-44 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_0030 d50fcaf74c4650a3bf1b9dd874fea4c8 304 Gene3D G3DSA:1.10.10.800 138 223 3.5E-42 T 12-10-2018 JDM601_0030 d50fcaf74c4650a3bf1b9dd874fea4c8 304 Gene3D G3DSA:3.40.50.1820 6 264 3.5E-42 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_0030 d50fcaf74c4650a3bf1b9dd874fea4c8 304 Pfam PF12146 Serine aminopeptidase, S33 29 260 2.0E-13 T 12-10-2018 IPR022742 Serine aminopeptidase, S33 JDM601_4262 a3dfd81c0cdae9ebef82d18dc7ef3a98 244 Gene3D G3DSA:3.90.226.10 1 234 7.6E-75 T 12-10-2018 JDM601_4262 a3dfd81c0cdae9ebef82d18dc7ef3a98 244 SUPERFAMILY SSF52096 3 239 5.83E-73 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily JDM601_4262 a3dfd81c0cdae9ebef82d18dc7ef3a98 244 Pfam PF00378 Enoyl-CoA hydratase/isomerase 3 224 4.3E-55 T 12-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 JDM601_3772 84bed08bac836354233a6ab35d4f17e8 413 Pfam PF00872 Transposase, Mutator family 6 378 1.5E-158 T 12-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 JDM601_3180 bb3c46b698d1c82ce5641d7729dbddf5 1193 TIGRFAM TIGR02257 cobalto_cobN: cobaltochelatase, CobN subunit 37 1187 0.0 T 12-10-2018 IPR011953 Cobaltochelatase, CobN subunit GO:0009236|GO:0051116 JDM601_3180 bb3c46b698d1c82ce5641d7729dbddf5 1193 Pfam PF02514 CobN/Magnesium Chelatase 100 1174 0.0 T 12-10-2018 IPR003672 CobN/magnesium chelatase GO:0009058 JDM601_0052 abb3c49ec439d5ee0865dda3dcd7435c 282 Pfam PF14011 EspG family 5 262 3.3E-34 T 12-10-2018 IPR025734 EspG family JDM601_0725 cdd1e22f72fa9172b566c6fbaa8117f1 515 ProSitePatterns PS00455 Putative AMP-binding domain signature. 169 180 - T 12-10-2018 IPR020845 AMP-binding, conserved site JDM601_0725 cdd1e22f72fa9172b566c6fbaa8117f1 515 Gene3D G3DSA:3.30.300.310 410 510 4.9E-30 T 12-10-2018 JDM601_0725 cdd1e22f72fa9172b566c6fbaa8117f1 515 Pfam PF00501 AMP-binding enzyme 13 413 8.8E-73 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 JDM601_0725 cdd1e22f72fa9172b566c6fbaa8117f1 515 Pfam PF13193 AMP-binding enzyme C-terminal domain 422 498 2.0E-18 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain JDM601_0725 cdd1e22f72fa9172b566c6fbaa8117f1 515 Gene3D G3DSA:3.40.50.12780 1 409 6.4E-84 T 12-10-2018 JDM601_0725 cdd1e22f72fa9172b566c6fbaa8117f1 515 SUPERFAMILY SSF56801 3 509 1.57E-115 T 12-10-2018 JDM601_2343 5559141b08e1909a2fc25872f82ec8d7 303 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 5 234 2.1E-42 T 12-10-2018 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 JDM601_2343 5559141b08e1909a2fc25872f82ec8d7 303 PIRSF PIRSF015582 1 301 1.8E-82 T 12-10-2018 IPR011206 Citrate lyase beta subunit-like JDM601_2343 5559141b08e1909a2fc25872f82ec8d7 303 Gene3D G3DSA:3.20.20.60 1 299 3.5E-97 T 12-10-2018 JDM601_2343 5559141b08e1909a2fc25872f82ec8d7 303 SUPERFAMILY SSF51621 2 244 1.52E-62 T 12-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 JDM601_2561 e8e7a945e806fb33a7a979f838bc8fac 314 Pfam PF02272 DHHA1 domain 234 312 8.5E-12 T 12-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 JDM601_2561 e8e7a945e806fb33a7a979f838bc8fac 314 SUPERFAMILY SSF64182 9 310 2.62E-56 T 12-10-2018 IPR038763 DHH phosphoesterase superfamily JDM601_2561 e8e7a945e806fb33a7a979f838bc8fac 314 Gene3D G3DSA:3.90.1640.10 1 192 7.1E-50 T 12-10-2018 JDM601_2561 e8e7a945e806fb33a7a979f838bc8fac 314 Gene3D G3DSA:3.10.310.30 193 314 2.4E-40 T 12-10-2018 JDM601_2561 e8e7a945e806fb33a7a979f838bc8fac 314 Pfam PF01368 DHH family 11 154 1.9E-13 T 12-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 JDM601_0124 afb462d2aa9a32cfdcc2b8c8c84962ad 519 Pfam PF02470 MlaD protein 32 99 1.3E-12 T 12-10-2018 IPR003399 Mce/MlaD JDM601_0124 afb462d2aa9a32cfdcc2b8c8c84962ad 519 TIGRFAM TIGR00996 Mtu_fam_mce: virulence factor Mce family protein 2 281 1.5E-64 T 12-10-2018 IPR005693 Virulence factor Mce protein JDM601_0124 afb462d2aa9a32cfdcc2b8c8c84962ad 519 PRINTS PR01782 Mycobacterial cell entry (MCE) protein signature 77 93 1.7E-74 T 12-10-2018 IPR005693 Virulence factor Mce protein JDM601_0124 afb462d2aa9a32cfdcc2b8c8c84962ad 519 PRINTS PR01782 Mycobacterial cell entry (MCE) protein signature 15 35 1.7E-74 T 12-10-2018 IPR005693 Virulence factor Mce protein JDM601_0124 afb462d2aa9a32cfdcc2b8c8c84962ad 519 PRINTS PR01782 Mycobacterial cell entry (MCE) protein signature 115 139 1.7E-74 T 12-10-2018 IPR005693 Virulence factor Mce protein JDM601_0124 afb462d2aa9a32cfdcc2b8c8c84962ad 519 PRINTS PR01782 Mycobacterial cell entry (MCE) protein signature 233 252 1.7E-74 T 12-10-2018 IPR005693 Virulence factor Mce protein JDM601_0124 afb462d2aa9a32cfdcc2b8c8c84962ad 519 PRINTS PR01782 Mycobacterial cell entry (MCE) protein signature 164 182 1.7E-74 T 12-10-2018 IPR005693 Virulence factor Mce protein JDM601_0124 afb462d2aa9a32cfdcc2b8c8c84962ad 519 PRINTS PR01782 Mycobacterial cell entry (MCE) protein signature 285 304 1.7E-74 T 12-10-2018 IPR005693 Virulence factor Mce protein JDM601_0124 afb462d2aa9a32cfdcc2b8c8c84962ad 519 PRINTS PR01782 Mycobacterial cell entry (MCE) protein signature 335 353 1.7E-74 T 12-10-2018 IPR005693 Virulence factor Mce protein JDM601_0124 afb462d2aa9a32cfdcc2b8c8c84962ad 519 PRINTS PR01782 Mycobacterial cell entry (MCE) protein signature 314 331 1.7E-74 T 12-10-2018 IPR005693 Virulence factor Mce protein JDM601_1917 6050d466c7b6647414d4e6cf4dafed35 204 Gene3D G3DSA:1.20.120.1760 11 188 1.6E-9 T 12-10-2018 JDM601_1917 6050d466c7b6647414d4e6cf4dafed35 204 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 59 81 - T 12-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 JDM601_1917 6050d466c7b6647414d4e6cf4dafed35 204 PIRSF PIRSF000847 12 200 1.8E-36 T 12-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 JDM601_1917 6050d466c7b6647414d4e6cf4dafed35 204 Pfam PF01066 CDP-alcohol phosphatidyltransferase 17 81 7.9E-13 T 12-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 JDM601_2796 0c5f612bf00ebbc190f0b3c718ae1b2f 578 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 192 319 6.0E-29 T 12-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 JDM601_2796 0c5f612bf00ebbc190f0b3c718ae1b2f 578 SUPERFAMILY SSF52518 2 169 1.99E-43 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold JDM601_2796 0c5f612bf00ebbc190f0b3c718ae1b2f 578 SUPERFAMILY SSF52467 184 352 6.42E-41 T 12-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily JDM601_2796 0c5f612bf00ebbc190f0b3c718ae1b2f 578 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 381 527 1.5E-37 T 12-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 JDM601_2796 0c5f612bf00ebbc190f0b3c718ae1b2f 578 Gene3D G3DSA:3.40.50.970 350 574 7.1E-63 T 12-10-2018 JDM601_2796 0c5f612bf00ebbc190f0b3c718ae1b2f 578 SUPERFAMILY SSF52518 358 557 6.51E-57 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold JDM601_2796 0c5f612bf00ebbc190f0b3c718ae1b2f 578 Gene3D G3DSA:3.40.50.1220 180 333 2.9E-45 T 12-10-2018 JDM601_2796 0c5f612bf00ebbc190f0b3c718ae1b2f 578 Gene3D G3DSA:3.40.50.970 1 172 1.2E-55 T 12-10-2018 JDM601_2796 0c5f612bf00ebbc190f0b3c718ae1b2f 578 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 3 169 2.3E-41 T 12-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 JDM601_2527 07b3a8dfed4fd0f15487c3664ae5bd75 338 SUPERFAMILY SSF53474 72 324 6.57E-42 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_2527 07b3a8dfed4fd0f15487c3664ae5bd75 338 Pfam PF07859 alpha/beta hydrolase fold 100 299 4.5E-41 T 12-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 JDM601_2527 07b3a8dfed4fd0f15487c3664ae5bd75 338 Gene3D G3DSA:3.40.50.1820 40 336 4.9E-61 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_2394 770dfd6fc172c5f1a93b44c4f78d7f8a 314 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 25 299 4.5E-81 T 12-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 JDM601_2163 8df5ef1297ce56ba39a00d753a2cd776 433 Pfam PF00202 Aminotransferase class-III 29 421 3.2E-111 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 JDM601_2163 8df5ef1297ce56ba39a00d753a2cd776 433 Gene3D G3DSA:3.90.1150.10 13 421 2.1E-168 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 JDM601_2163 8df5ef1297ce56ba39a00d753a2cd776 433 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 17 428 7.4E-162 T 12-10-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 JDM601_2163 8df5ef1297ce56ba39a00d753a2cd776 433 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 250 287 - T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 JDM601_2163 8df5ef1297ce56ba39a00d753a2cd776 433 Gene3D G3DSA:3.40.640.10 69 338 2.1E-168 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 JDM601_2163 8df5ef1297ce56ba39a00d753a2cd776 433 SUPERFAMILY SSF53383 9 431 3.43E-115 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase JDM601_2163 8df5ef1297ce56ba39a00d753a2cd776 433 Hamap MF_00834 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [bioA]. 5 432 47.918 T 12-10-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 JDM601_0884 3ded2ef9f8e2d573f903eeea1b5501e9 694 Pfam PF00150 Cellulase (glycosyl hydrolase family 5) 278 568 8.8E-33 T 12-10-2018 IPR001547 Glycoside hydrolase, family 5 GO:0004553|GO:0005975 JDM601_0884 3ded2ef9f8e2d573f903eeea1b5501e9 694 Gene3D G3DSA:3.20.20.80 257 612 2.0E-155 T 12-10-2018 JDM601_0884 3ded2ef9f8e2d573f903eeea1b5501e9 694 Gene3D G3DSA:2.60.40.1180 248 691 2.0E-155 T 12-10-2018 IPR013780 Glycosyl hydrolase, all-beta JDM601_0884 3ded2ef9f8e2d573f903eeea1b5501e9 694 SUPERFAMILY SSF51445 233 569 3.19E-52 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily JDM601_3552 346856c54dca042963f363b6ee394efa 414 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 13 127 1.4E-12 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 JDM601_3552 346856c54dca042963f363b6ee394efa 414 Gene3D G3DSA:2.40.110.10 132 241 1.1E-30 T 12-10-2018 JDM601_3552 346856c54dca042963f363b6ee394efa 414 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 134 215 3.2E-19 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 JDM601_3552 346856c54dca042963f363b6ee394efa 414 SUPERFAMILY SSF47203 237 396 9.34E-14 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 JDM601_3552 346856c54dca042963f363b6ee394efa 414 Gene3D G3DSA:1.10.540.10 8 126 3.0E-20 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 JDM601_3552 346856c54dca042963f363b6ee394efa 414 SUPERFAMILY SSF56645 12 244 8.64E-52 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 JDM601_3552 346856c54dca042963f363b6ee394efa 414 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 237 392 6.5E-12 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 JDM601_3552 346856c54dca042963f363b6ee394efa 414 Gene3D G3DSA:1.20.140.10 242 398 1.3E-20 T 12-10-2018 JDM601_0865 cbdbb780ebdeae3c591ee862fa970501 119 SUPERFAMILY SSF54427 2 90 3.95E-18 T 12-10-2018 IPR032710 NTF2-like domain superfamily JDM601_0865 cbdbb780ebdeae3c591ee862fa970501 119 Gene3D G3DSA:3.10.450.50 1 111 2.8E-35 T 12-10-2018 JDM601_2989 425cd402f2e1a7f9054bbeec9e2d9b37 200 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 18 31 2.9E-6 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_2989 425cd402f2e1a7f9054bbeec9e2d9b37 200 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 39 62 2.9E-6 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_2989 425cd402f2e1a7f9054bbeec9e2d9b37 200 Gene3D G3DSA:1.10.357.10 7 189 1.5E-17 T 12-10-2018 JDM601_2989 425cd402f2e1a7f9054bbeec9e2d9b37 200 Pfam PF00440 Bacterial regulatory proteins, tetR family 19 62 6.6E-10 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_2989 425cd402f2e1a7f9054bbeec9e2d9b37 200 SUPERFAMILY SSF46689 10 80 8.48E-14 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JDM601_2912 e145fe761a9b024b06432ec6c2cb09ef 713 SUPERFAMILY SSF52540 14 598 4.92E-126 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_2912 e145fe761a9b024b06432ec6c2cb09ef 713 Gene3D G3DSA:3.40.50.300 481 595 1.2E-24 T 12-10-2018 JDM601_2912 e145fe761a9b024b06432ec6c2cb09ef 713 Gene3D G3DSA:3.40.50.300 305 412 2.9E-22 T 12-10-2018 JDM601_2912 e145fe761a9b024b06432ec6c2cb09ef 713 Gene3D G3DSA:3.40.50.300 19 298 3.2E-71 T 12-10-2018 JDM601_2912 e145fe761a9b024b06432ec6c2cb09ef 713 Pfam PF00580 UvrD/REP helicase N-terminal domain 20 296 1.6E-43 T 12-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 JDM601_2912 e145fe761a9b024b06432ec6c2cb09ef 713 SMART SM00341 639 713 2.0E-14 T 12-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 JDM601_2912 e145fe761a9b024b06432ec6c2cb09ef 713 Gene3D G3DSA:1.10.150.80 633 713 8.7E-21 T 12-10-2018 JDM601_2912 e145fe761a9b024b06432ec6c2cb09ef 713 Pfam PF13361 UvrD-like helicase C-terminal domain 303 432 1.7E-16 T 12-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 JDM601_2912 e145fe761a9b024b06432ec6c2cb09ef 713 Pfam PF00570 HRDC domain 643 709 1.1E-18 T 12-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 JDM601_2912 e145fe761a9b024b06432ec6c2cb09ef 713 Pfam PF13361 UvrD-like helicase C-terminal domain 506 572 1.1E-18 T 12-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 JDM601_2912 e145fe761a9b024b06432ec6c2cb09ef 713 SUPERFAMILY SSF47819 633 711 8.29E-20 T 12-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 JDM601_2912 e145fe761a9b024b06432ec6c2cb09ef 713 Gene3D G3DSA:1.10.10.160 129 214 3.2E-71 T 12-10-2018 IPR013986 DExx box DNA helicase domain superfamily JDM601_0704 d43d7a8a789656febbdee4f3fe52eb94 199 SUPERFAMILY SSF46689 16 95 7.7E-13 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JDM601_0704 d43d7a8a789656febbdee4f3fe52eb94 199 Pfam PF00440 Bacterial regulatory proteins, tetR family 27 73 1.1E-9 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_0704 d43d7a8a789656febbdee4f3fe52eb94 199 Gene3D G3DSA:1.10.357.10 15 199 8.7E-23 T 12-10-2018 JDM601_3269 4f1b686b3f2bcbf99bddf391a6d2a063 147 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 143 27.926 T 12-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 JDM601_3269 4f1b686b3f2bcbf99bddf391a6d2a063 147 SUPERFAMILY SSF52161 5 144 6.54E-58 T 12-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 JDM601_3269 4f1b686b3f2bcbf99bddf391a6d2a063 147 PIRSF PIRSF002181 3 147 1.9E-47 T 12-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 JDM601_3269 4f1b686b3f2bcbf99bddf391a6d2a063 147 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 5 141 3.9E-61 T 12-10-2018 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JDM601_3269 4f1b686b3f2bcbf99bddf391a6d2a063 147 Pfam PF00572 Ribosomal protein L13 15 137 8.9E-54 T 12-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 JDM601_3269 4f1b686b3f2bcbf99bddf391a6d2a063 147 Gene3D G3DSA:3.90.1180.10 3 146 3.4E-59 T 12-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 JDM601_0135 7d0fa955d2e59c6208e2e2ffe2130889 416 Pfam PF02470 MlaD protein 52 126 5.3E-12 T 12-10-2018 IPR003399 Mce/MlaD JDM601_2705 ce9864c39e0d8545a6f0b6ed930feb80 239 PIRSF PIRSF015736 1 239 3.5E-54 T 12-10-2018 IPR026286 Maleate isomerase/Arylmalonate decarboxylase JDM601_2705 ce9864c39e0d8545a6f0b6ed930feb80 239 Gene3D G3DSA:3.40.50.12500 1 237 6.0E-58 T 12-10-2018 JDM601_2039 7968647ae822ced1cdd9807186a77c8d 416 Pfam PF01844 HNH endonuclease 312 350 1.8E-7 T 12-10-2018 IPR002711 HNH endonuclease GO:0003676|GO:0004519 JDM601_2039 7968647ae822ced1cdd9807186a77c8d 416 SMART SM00507 295 346 6.6E-14 T 12-10-2018 IPR003615 HNH nuclease JDM601_2039 7968647ae822ced1cdd9807186a77c8d 416 Pfam PF02720 Domain of unknown function (DUF222) 22 304 4.4E-63 T 12-10-2018 IPR003870 Domain of unknown function DUF222 JDM601_0908 3d1fa3661166ef204b703e0cccde3d01 195 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 61 1.6E-10 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_0908 3d1fa3661166ef204b703e0cccde3d01 195 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 3.2E-6 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_0908 3d1fa3661166ef204b703e0cccde3d01 195 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 3.2E-6 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_0908 3d1fa3661166ef204b703e0cccde3d01 195 Gene3D G3DSA:1.10.357.10 2 193 1.9E-21 T 12-10-2018 JDM601_0908 3d1fa3661166ef204b703e0cccde3d01 195 SUPERFAMILY SSF46689 2 81 1.9E-13 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JDM601_0908 3d1fa3661166ef204b703e0cccde3d01 195 ProSitePatterns PS01081 TetR-type HTH domain signature. 28 59 - T 12-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site JDM601_2180 0170157b4c5a8208ff0c6917fdffd8dc 1179 Pfam PF01336 OB-fold nucleic acid binding domain 1019 1094 1.2E-6 T 12-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 JDM601_2180 0170157b4c5a8208ff0c6917fdffd8dc 1179 Pfam PF14579 Helix-hairpin-helix motif 830 917 4.9E-23 T 12-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 JDM601_2180 0170157b4c5a8208ff0c6917fdffd8dc 1179 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 5 1056 0.0 T 12-10-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 JDM601_2180 0170157b4c5a8208ff0c6917fdffd8dc 1179 Gene3D G3DSA:3.20.20.140 1 289 2.5E-92 T 12-10-2018 JDM601_2180 0170157b4c5a8208ff0c6917fdffd8dc 1179 SMART SM00481 6 73 1.7E-32 T 12-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal JDM601_2180 0170157b4c5a8208ff0c6917fdffd8dc 1179 SUPERFAMILY SSF89550 5 247 2.88E-29 T 12-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 JDM601_2180 0170157b4c5a8208ff0c6917fdffd8dc 1179 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 315 757 1.3E-159 T 12-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 JDM601_2180 0170157b4c5a8208ff0c6917fdffd8dc 1179 Pfam PF02811 PHP domain 7 193 8.4E-47 T 12-10-2018 IPR004013 PHP domain GO:0003824 JDM601_2180 0170157b4c5a8208ff0c6917fdffd8dc 1179 Gene3D G3DSA:1.10.10.1600 448 537 4.8E-15 T 12-10-2018 JDM601_0646 f51307ee6d3407de621fbdd2cb9e3387 374 Gene3D G3DSA:3.40.50.450 8 343 2.5E-97 T 12-10-2018 JDM601_0646 f51307ee6d3407de621fbdd2cb9e3387 374 ProSitePatterns PS00433 Phosphofructokinase signature. 286 304 - T 12-10-2018 IPR015912 Phosphofructokinase, conserved site GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 JDM601_0646 f51307ee6d3407de621fbdd2cb9e3387 374 Pfam PF00365 Phosphofructokinase 7 318 5.7E-90 T 12-10-2018 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 JDM601_0646 f51307ee6d3407de621fbdd2cb9e3387 374 Gene3D G3DSA:3.40.50.460 162 298 2.5E-97 T 12-10-2018 JDM601_0646 f51307ee6d3407de621fbdd2cb9e3387 374 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 35 48 2.2E-63 T 12-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 JDM601_0646 f51307ee6d3407de621fbdd2cb9e3387 374 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 180 196 2.2E-63 T 12-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 JDM601_0646 f51307ee6d3407de621fbdd2cb9e3387 374 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 10 29 2.2E-63 T 12-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 JDM601_0646 f51307ee6d3407de621fbdd2cb9e3387 374 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 282 304 2.2E-63 T 12-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 JDM601_0646 f51307ee6d3407de621fbdd2cb9e3387 374 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 160 178 2.2E-63 T 12-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 JDM601_0646 f51307ee6d3407de621fbdd2cb9e3387 374 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 198 215 2.2E-63 T 12-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 JDM601_0646 f51307ee6d3407de621fbdd2cb9e3387 374 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 234 246 2.2E-63 T 12-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 JDM601_0646 f51307ee6d3407de621fbdd2cb9e3387 374 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 115 131 2.2E-63 T 12-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 JDM601_0646 f51307ee6d3407de621fbdd2cb9e3387 374 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 142 159 2.2E-63 T 12-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 JDM601_0646 f51307ee6d3407de621fbdd2cb9e3387 374 PIRSF PIRSF000532 4 368 2.4E-101 T 12-10-2018 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type GO:0005524|GO:0006002|GO:0006096|GO:0008443 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 JDM601_0646 f51307ee6d3407de621fbdd2cb9e3387 374 Hamap MF_01976 Pyrophosphate--fructose 6-phosphate 1-phosphotransferase [pfp]. 6 367 38.457 T 12-10-2018 IPR012829 Phosphofructokinase, mixed-substrate PFK group III GO:0006096|GO:0047334 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 JDM601_0646 f51307ee6d3407de621fbdd2cb9e3387 374 SUPERFAMILY SSF53784 3 358 9.42E-106 T 12-10-2018 IPR035966 Phosphofructokinase superfamily GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 JDM601_1446 530f80231e4909d5efd160826eefef1a 482 SUPERFAMILY SSF102735 2 129 8.24E-36 T 12-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 JDM601_1446 530f80231e4909d5efd160826eefef1a 482 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 158 217 3.5E-9 T 12-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain JDM601_1446 530f80231e4909d5efd160826eefef1a 482 SUPERFAMILY SSF109998 246 435 5.89E-36 T 12-10-2018 IPR027304 Trigger factor/SurA domain superfamily JDM601_1446 530f80231e4909d5efd160826eefef1a 482 Gene3D G3DSA:3.30.70.1050 1 116 4.7E-34 T 12-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 JDM601_1446 530f80231e4909d5efd160826eefef1a 482 Pfam PF05697 Bacterial trigger factor protein (TF) 2 144 4.9E-41 T 12-10-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 JDM601_1446 530f80231e4909d5efd160826eefef1a 482 SUPERFAMILY SSF54534 133 244 2.16E-24 T 12-10-2018 JDM601_1446 530f80231e4909d5efd160826eefef1a 482 Hamap MF_00303 Trigger factor [tig]. 1 424 19.101 T 12-10-2018 IPR005215 Trigger factor GO:0015031 JDM601_1446 530f80231e4909d5efd160826eefef1a 482 TIGRFAM TIGR00115 tig: trigger factor 12 416 1.9E-120 T 12-10-2018 IPR005215 Trigger factor GO:0015031 JDM601_1446 530f80231e4909d5efd160826eefef1a 482 PIRSF PIRSF003095 1 444 2.6E-122 T 12-10-2018 IPR005215 Trigger factor GO:0015031 JDM601_1446 530f80231e4909d5efd160826eefef1a 482 Gene3D G3DSA:1.10.3120.10 117 415 2.9E-65 T 12-10-2018 IPR037041 Trigger factor, C-terminal domain superfamily GO:0006457|GO:0015031 JDM601_1446 530f80231e4909d5efd160826eefef1a 482 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 258 416 6.9E-36 T 12-10-2018 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 JDM601_1446 530f80231e4909d5efd160826eefef1a 482 Gene3D G3DSA:3.10.50.40 151 243 2.9E-65 T 12-10-2018 JDM601_0685 9b42e05b1c6dc18db3e2705650e4e9a0 252 ProSitePatterns PS00730 AP endonucleases family 2 signature 2. 159 166 - T 12-10-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 JDM601_0685 9b42e05b1c6dc18db3e2705650e4e9a0 252 ProSitePatterns PS00731 AP endonucleases family 2 signature 3. 191 207 - T 12-10-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 JDM601_0685 9b42e05b1c6dc18db3e2705650e4e9a0 252 Gene3D G3DSA:3.20.20.150 1 251 4.8E-60 T 12-10-2018 JDM601_0685 9b42e05b1c6dc18db3e2705650e4e9a0 252 Pfam PF01261 Xylose isomerase-like TIM barrel 13 215 7.8E-34 T 12-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain JDM601_0685 9b42e05b1c6dc18db3e2705650e4e9a0 252 TIGRFAM TIGR00587 nfo: apurinic endonuclease (APN1) 2 244 3.6E-39 T 12-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 JDM601_0685 9b42e05b1c6dc18db3e2705650e4e9a0 252 ProSitePatterns PS00729 AP endonucleases family 2 signature 1. 56 64 - T 12-10-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 JDM601_0685 9b42e05b1c6dc18db3e2705650e4e9a0 252 SMART SM00518 2 251 5.3E-78 T 12-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 JDM601_0685 9b42e05b1c6dc18db3e2705650e4e9a0 252 SUPERFAMILY SSF51658 2 249 3.27E-59 T 12-10-2018 IPR036237 Xylose isomerase-like superfamily JDM601_0849 bbfceae3dc10ea4febae4c9dc5b1a97c 451 SUPERFAMILY SSF51735 154 402 2.79E-32 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_0849 bbfceae3dc10ea4febae4c9dc5b1a97c 451 Gene3D G3DSA:3.30.530.20 2 147 3.0E-47 T 12-10-2018 IPR023393 START-like domain superfamily JDM601_0849 bbfceae3dc10ea4febae4c9dc5b1a97c 451 Pfam PF01370 NAD dependent epimerase/dehydratase family 156 360 6.2E-9 T 12-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 JDM601_0849 bbfceae3dc10ea4febae4c9dc5b1a97c 451 Gene3D G3DSA:3.40.50.720 151 436 2.4E-78 T 12-10-2018 JDM601_0849 bbfceae3dc10ea4febae4c9dc5b1a97c 451 Pfam PF08338 Domain of unknown function (DUF1731) 398 446 1.3E-14 T 12-10-2018 IPR013549 Domain of unknown function DUF1731 JDM601_0849 bbfceae3dc10ea4febae4c9dc5b1a97c 451 SUPERFAMILY SSF55961 3 138 1.39E-14 T 12-10-2018 JDM601_0849 bbfceae3dc10ea4febae4c9dc5b1a97c 451 TIGRFAM TIGR01777 yfcH: TIGR01777 family protein 155 443 1.9E-87 T 12-10-2018 IPR010099 Epimerase family protein SDR39U1 JDM601_1852 17c7ca39f0f400da0ebcd9560e6d78f9 598 Pfam PF02463 RecF/RecN/SMC N terminal domain 2 541 2.2E-13 T 12-10-2018 IPR003395 RecF/RecN/SMC, N-terminal JDM601_1852 17c7ca39f0f400da0ebcd9560e6d78f9 598 SUPERFAMILY SSF52540 4 543 5.77E-18 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_1852 17c7ca39f0f400da0ebcd9560e6d78f9 598 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 587 3.8E-207 T 12-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 JDM601_1852 17c7ca39f0f400da0ebcd9560e6d78f9 598 SUPERFAMILY SSF52540 2 224 2.35E-47 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_1852 17c7ca39f0f400da0ebcd9560e6d78f9 598 PIRSF PIRSF003128 1 591 1.2E-159 T 12-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 JDM601_1852 17c7ca39f0f400da0ebcd9560e6d78f9 598 Gene3D G3DSA:3.40.50.300 1 271 5.7E-35 T 12-10-2018 JDM601_1852 17c7ca39f0f400da0ebcd9560e6d78f9 598 Gene3D G3DSA:3.40.50.300 292 587 1.4E-49 T 12-10-2018 JDM601_4201 114f719b281047b8456c4e6547ca1229 485 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 256 263 - T 12-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 JDM601_4201 114f719b281047b8456c4e6547ca1229 485 Pfam PF00171 Aldehyde dehydrogenase family 18 481 3.4E-162 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 JDM601_4201 114f719b281047b8456c4e6547ca1229 485 Gene3D G3DSA:3.40.309.10 260 450 4.9E-171 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 JDM601_4201 114f719b281047b8456c4e6547ca1229 485 SUPERFAMILY SSF53720 11 482 1.83E-155 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 JDM601_4201 114f719b281047b8456c4e6547ca1229 485 Gene3D G3DSA:3.40.605.10 17 479 4.9E-171 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 JDM601_4172 bd280e39dd0b1e071bb6ab9801185ca3 212 Gene3D G3DSA:1.10.10.60 19 64 1.9E-24 T 12-10-2018 JDM601_4172 bd280e39dd0b1e071bb6ab9801185ca3 212 Pfam PF00440 Bacterial regulatory proteins, tetR family 26 71 1.7E-13 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_4172 bd280e39dd0b1e071bb6ab9801185ca3 212 SUPERFAMILY SSF46689 13 84 4.59E-15 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JDM601_4172 bd280e39dd0b1e071bb6ab9801185ca3 212 SUPERFAMILY SSF48498 94 209 6.99E-36 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily JDM601_4172 bd280e39dd0b1e071bb6ab9801185ca3 212 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 47 70 1.8E-7 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_4172 bd280e39dd0b1e071bb6ab9801185ca3 212 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 26 39 1.8E-7 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_4172 bd280e39dd0b1e071bb6ab9801185ca3 212 Gene3D G3DSA:1.10.357.10 65 211 7.4E-39 T 12-10-2018 JDM601_3945 a1909cd90bcee0d8f7be81b899504b1e 657 ProSitePatterns PS00455 Putative AMP-binding domain signature. 265 276 - T 12-10-2018 IPR020845 AMP-binding, conserved site JDM601_3945 a1909cd90bcee0d8f7be81b899504b1e 657 Gene3D G3DSA:3.30.300.30 531 656 8.6E-28 T 12-10-2018 JDM601_3945 a1909cd90bcee0d8f7be81b899504b1e 657 Pfam PF13193 AMP-binding enzyme C-terminal domain 544 623 2.9E-24 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain JDM601_3945 a1909cd90bcee0d8f7be81b899504b1e 657 SUPERFAMILY SSF56801 31 654 1.83E-171 T 12-10-2018 JDM601_3945 a1909cd90bcee0d8f7be81b899504b1e 657 Hamap MF_01123 Acetyl-coenzyme A synthetase [acs]. 11 657 49.333 T 12-10-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 JDM601_3945 a1909cd90bcee0d8f7be81b899504b1e 657 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 31 83 4.3E-20 T 12-10-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 JDM601_3945 a1909cd90bcee0d8f7be81b899504b1e 657 Gene3D G3DSA:3.40.50.12780 57 528 1.5E-103 T 12-10-2018 JDM601_3945 a1909cd90bcee0d8f7be81b899504b1e 657 Pfam PF00501 AMP-binding enzyme 87 535 5.9E-97 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 JDM601_3945 a1909cd90bcee0d8f7be81b899504b1e 657 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 26 655 3.5E-284 T 12-10-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 JDM601_0416 7d496c7d6a4a514e7b1f2a0f0c4931e4 276 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 2.3E-30 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0416 7d496c7d6a4a514e7b1f2a0f0c4931e4 276 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 94 105 2.3E-30 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0416 7d496c7d6a4a514e7b1f2a0f0c4931e4 276 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 194 2.3E-30 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0416 7d496c7d6a4a514e7b1f2a0f0c4931e4 276 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 196 213 2.3E-30 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0416 7d496c7d6a4a514e7b1f2a0f0c4931e4 276 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 145 161 2.3E-30 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0416 7d496c7d6a4a514e7b1f2a0f0c4931e4 276 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 236 256 2.3E-30 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0416 7d496c7d6a4a514e7b1f2a0f0c4931e4 276 Gene3D G3DSA:3.40.50.720 1 275 6.8E-72 T 12-10-2018 JDM601_0416 7d496c7d6a4a514e7b1f2a0f0c4931e4 276 TIGRFAM TIGR03971 SDR_subfam_1: SDR family mycofactocin-dependent oxidoreductase 4 274 5.3E-111 T 12-10-2018 IPR023985 Mycofactocin-dependent oxidoreductase JDM601_0416 7d496c7d6a4a514e7b1f2a0f0c4931e4 276 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 159 2.2E-7 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0416 7d496c7d6a4a514e7b1f2a0f0c4931e4 276 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 94 105 2.2E-7 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0416 7d496c7d6a4a514e7b1f2a0f0c4931e4 276 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 175 194 2.2E-7 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0416 7d496c7d6a4a514e7b1f2a0f0c4931e4 276 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 162 190 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 JDM601_0416 7d496c7d6a4a514e7b1f2a0f0c4931e4 276 SUPERFAMILY SSF51735 1 273 5.63E-64 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_0416 7d496c7d6a4a514e7b1f2a0f0c4931e4 276 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 272 1.8E-45 T 12-10-2018 JDM601_4023 8affa8ae33de97cdf18ced4d07cc6e4a 350 SUPERFAMILY SSF50249 215 332 1.43E-14 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold JDM601_4023 8affa8ae33de97cdf18ced4d07cc6e4a 350 ProSitePatterns PS00697 ATP-dependent DNA ligase AMP-binding site. 39 47 - T 12-10-2018 IPR016059 DNA ligase, ATP-dependent, conserved site GO:0003909|GO:0051103 JDM601_4023 8affa8ae33de97cdf18ced4d07cc6e4a 350 Gene3D G3DSA:2.40.50.140 214 334 5.9E-28 T 12-10-2018 JDM601_4023 8affa8ae33de97cdf18ced4d07cc6e4a 350 Pfam PF01068 ATP dependent DNA ligase domain 20 212 1.5E-33 T 12-10-2018 IPR012310 DNA ligase, ATP-dependent, central GO:0003910|GO:0005524|GO:0006281|GO:0006310 JDM601_4023 8affa8ae33de97cdf18ced4d07cc6e4a 350 SUPERFAMILY SSF56091 16 212 3.36E-40 T 12-10-2018 JDM601_4023 8affa8ae33de97cdf18ced4d07cc6e4a 350 Pfam PF04679 ATP dependent DNA ligase C terminal region 230 326 2.1E-14 T 12-10-2018 IPR012309 DNA ligase, ATP-dependent, C-terminal GO:0003910|GO:0006281|GO:0006310 JDM601_4023 8affa8ae33de97cdf18ced4d07cc6e4a 350 Gene3D G3DSA:3.30.470.30 17 212 4.3E-40 T 12-10-2018 JDM601_1133 aa189f5dfeafa03518234e56b685a9fc 330 SUPERFAMILY SSF54593 135 292 8.67E-27 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase JDM601_1133 aa189f5dfeafa03518234e56b685a9fc 330 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 143 267 3.9E-16 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain JDM601_1133 aa189f5dfeafa03518234e56b685a9fc 330 Gene3D G3DSA:3.10.180.10 133 303 2.9E-43 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase JDM601_1133 aa189f5dfeafa03518234e56b685a9fc 330 Gene3D G3DSA:3.10.180.10 6 129 6.7E-30 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase JDM601_1133 aa189f5dfeafa03518234e56b685a9fc 330 SUPERFAMILY SSF54593 4 120 1.03E-16 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase JDM601_2626 dc7aae3f4b85be06eda7c96f8ffa6a20 113 Pfam PF01245 Ribosomal protein L19 4 112 4.7E-49 T 12-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JDM601_2626 dc7aae3f4b85be06eda7c96f8ffa6a20 113 PRINTS PR00061 Ribosomal protein L19 signature 87 112 1.0E-40 T 12-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JDM601_2626 dc7aae3f4b85be06eda7c96f8ffa6a20 113 PRINTS PR00061 Ribosomal protein L19 signature 3 32 1.0E-40 T 12-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JDM601_2626 dc7aae3f4b85be06eda7c96f8ffa6a20 113 PRINTS PR00061 Ribosomal protein L19 signature 33 62 1.0E-40 T 12-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JDM601_2626 dc7aae3f4b85be06eda7c96f8ffa6a20 113 SUPERFAMILY SSF50104 1 112 3.81E-44 T 12-10-2018 IPR008991 Translation protein SH3-like domain superfamily JDM601_2626 dc7aae3f4b85be06eda7c96f8ffa6a20 113 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 2 112 9.6E-50 T 12-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JDM601_2626 dc7aae3f4b85be06eda7c96f8ffa6a20 113 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 1 113 30.041 T 12-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JDM601_2626 dc7aae3f4b85be06eda7c96f8ffa6a20 113 PIRSF PIRSF002191 1 113 1.3E-48 T 12-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JDM601_2626 dc7aae3f4b85be06eda7c96f8ffa6a20 113 Gene3D G3DSA:2.30.30.790 9 113 1.5E-15 T 12-10-2018 IPR038657 Ribosomal protein L19 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JDM601_1038 88dcd26a8f33112f05cdf36eed116227 402 Pfam PF05960 Bacterial protein of unknown function (DUF885) 107 374 9.5E-9 T 12-10-2018 IPR010281 Protein of unknown function DUF885 JDM601_3232 44fe45b007af76130e154a3bc2899676 126 Pfam PF02627 Carboxymuconolactone decarboxylase family 35 117 7.4E-24 T 12-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 JDM601_3232 44fe45b007af76130e154a3bc2899676 126 SUPERFAMILY SSF69118 4 121 1.03E-35 T 12-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 JDM601_3232 44fe45b007af76130e154a3bc2899676 126 Gene3D G3DSA:1.20.1290.10 3 123 2.4E-39 T 12-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 JDM601_3348 210fbaeb998f369195a148d96ffe9ff0 395 SUPERFAMILY SSF102114 21 325 6.67E-61 T 12-10-2018 JDM601_3348 210fbaeb998f369195a148d96ffe9ff0 395 TIGRFAM TIGR03962 mycofact_rSAM: mycofactocin radical SAM maturase 11 350 6.4E-196 T 12-10-2018 IPR023913 Mycofactocin, radical SAM peptide maturase JDM601_3348 210fbaeb998f369195a148d96ffe9ff0 395 PIRSF PIRSF037420 11 234 7.9E-51 T 12-10-2018 IPR017200 Coenzyme PQQ synthesis protein E JDM601_3348 210fbaeb998f369195a148d96ffe9ff0 395 PIRSF PIRSF037420 244 360 3.3E-10 T 12-10-2018 IPR017200 Coenzyme PQQ synthesis protein E JDM601_3348 210fbaeb998f369195a148d96ffe9ff0 395 Gene3D G3DSA:3.20.20.70 18 304 1.2E-50 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JDM601_3348 210fbaeb998f369195a148d96ffe9ff0 395 SMART SM00729 22 221 0.0056 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 JDM601_3348 210fbaeb998f369195a148d96ffe9ff0 395 Pfam PF13186 Iron-sulfur cluster-binding domain 253 316 1.1E-4 T 12-10-2018 IPR023885 4Fe4S-binding SPASM domain JDM601_3348 210fbaeb998f369195a148d96ffe9ff0 395 Pfam PF04055 Radical SAM superfamily 28 181 1.0E-24 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 JDM601_3348 210fbaeb998f369195a148d96ffe9ff0 395 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 253 343 1.0E-14 T 12-10-2018 IPR023885 4Fe4S-binding SPASM domain JDM601_3300 715a4e5f252015c43c54e67a9fea5014 183 Hamap MF_00235 Adenylate kinase [adk]. 1 182 44.14 T 12-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 JDM601_3300 715a4e5f252015c43c54e67a9fea5014 183 PRINTS PR00094 Adenylate kinase signature 32 46 1.2E-31 T 12-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 JDM601_3300 715a4e5f252015c43c54e67a9fea5014 183 PRINTS PR00094 Adenylate kinase signature 146 160 1.2E-31 T 12-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 JDM601_3300 715a4e5f252015c43c54e67a9fea5014 183 PRINTS PR00094 Adenylate kinase signature 4 17 1.2E-31 T 12-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 JDM601_3300 715a4e5f252015c43c54e67a9fea5014 183 PRINTS PR00094 Adenylate kinase signature 129 144 1.2E-31 T 12-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 JDM601_3300 715a4e5f252015c43c54e67a9fea5014 183 PRINTS PR00094 Adenylate kinase signature 81 97 1.2E-31 T 12-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 JDM601_3300 715a4e5f252015c43c54e67a9fea5014 183 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 12-10-2018 IPR033690 Adenylate kinase, conserved site KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 JDM601_3300 715a4e5f252015c43c54e67a9fea5014 183 SUPERFAMILY SSF52540 2 182 5.29E-42 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_3300 715a4e5f252015c43c54e67a9fea5014 183 Pfam PF00406 Adenylate kinase 5 158 3.2E-53 T 12-10-2018 JDM601_3300 715a4e5f252015c43c54e67a9fea5014 183 Gene3D G3DSA:3.40.50.300 1 182 7.5E-66 T 12-10-2018 JDM601_0303 da2dd0db0be80d73f8523c9a5d4a6523 216 Pfam PF00881 Nitroreductase family 18 182 2.0E-27 T 12-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 JDM601_0303 da2dd0db0be80d73f8523c9a5d4a6523 216 Gene3D G3DSA:3.40.109.10 1 186 4.4E-44 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 JDM601_0303 da2dd0db0be80d73f8523c9a5d4a6523 216 TIGRFAM TIGR02476 BluB: 5,6-dimethylbenzimidazole synthase 6 206 1.5E-72 T 12-10-2018 IPR012825 5,6-dimethylbenzimidazole synthase BluB KEGG: 00740+1.13.11.79|MetaCyc: PWY-5523 JDM601_0303 da2dd0db0be80d73f8523c9a5d4a6523 216 SUPERFAMILY SSF55469 14 214 2.75E-49 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 JDM601_3473 759e1cdb43f71d2fe4ee23abaa1c0604 390 Pfam PF02470 MlaD protein 28 106 1.9E-10 T 12-10-2018 IPR003399 Mce/MlaD JDM601_3473 759e1cdb43f71d2fe4ee23abaa1c0604 390 Pfam PF11887 Cholesterol uptake porter CUP1 of Mce4, putative 135 351 4.7E-57 T 12-10-2018 IPR024516 Mammalian cell entry, C-terminal JDM601_3473 759e1cdb43f71d2fe4ee23abaa1c0604 390 TIGRFAM TIGR00996 Mtu_fam_mce: virulence factor Mce family protein 3 285 8.3E-65 T 12-10-2018 IPR005693 Virulence factor Mce protein JDM601_4264 41eb4b41ce4f14b6eb05f2bed2bbf754 345 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 197 316 2.3E-12 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 JDM601_4264 41eb4b41ce4f14b6eb05f2bed2bbf754 345 SUPERFAMILY SSF47203 197 331 1.61E-20 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 JDM601_4264 41eb4b41ce4f14b6eb05f2bed2bbf754 345 Gene3D G3DSA:1.20.140.10 191 334 6.4E-19 T 12-10-2018 JDM601_4264 41eb4b41ce4f14b6eb05f2bed2bbf754 345 SUPERFAMILY SSF56645 40 147 8.03E-6 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 JDM601_4264 41eb4b41ce4f14b6eb05f2bed2bbf754 345 Gene3D G3DSA:1.10.540.10 11 109 1.3E-8 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 JDM601_4052 57bf1587538900144de85f0b2d3d0fb1 155 Gene3D G3DSA:2.40.128.580 2 155 1.1E-53 T 12-10-2018 JDM601_4052 57bf1587538900144de85f0b2d3d0fb1 155 Pfam PF14231 GXWXG protein 27 85 7.5E-26 T 12-10-2018 IPR025951 GXWXG domain JDM601_4052 57bf1587538900144de85f0b2d3d0fb1 155 Pfam PF14232 Domain of unknown function (DUF4334) 96 154 5.7E-28 T 12-10-2018 IPR025568 Domain of unknown function DUF4334 JDM601_3378 158c4dffbb91fa8ef3ef2c245a3ec9b2 145 SUPERFAMILY SSF54427 4 129 1.8E-33 T 12-10-2018 IPR032710 NTF2-like domain superfamily JDM601_3378 158c4dffbb91fa8ef3ef2c245a3ec9b2 145 Gene3D G3DSA:3.10.450.50 6 133 1.2E-32 T 12-10-2018 JDM601_3378 158c4dffbb91fa8ef3ef2c245a3ec9b2 145 Pfam PF13577 SnoaL-like domain 5 127 1.8E-28 T 12-10-2018 IPR037401 SnoaL-like domain JDM601_2020 6595aa6b233960d17c7ecf648e90fa7b 267 SUPERFAMILY SSF53335 8 255 2.38E-63 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JDM601_2020 6595aa6b233960d17c7ecf648e90fa7b 267 Gene3D G3DSA:3.40.50.150 2 266 4.5E-71 T 12-10-2018 JDM601_2020 6595aa6b233960d17c7ecf648e90fa7b 267 TIGRFAM TIGR00027 mthyl_TIGR00027: methyltransferase, TIGR00027 family 10 248 7.0E-73 T 12-10-2018 IPR011610 S-adenosyl-L-methionine-dependent methyltransferase, putative GO:0008168 JDM601_2020 6595aa6b233960d17c7ecf648e90fa7b 267 Pfam PF04072 Leucine carboxyl methyltransferase 13 177 1.8E-46 T 12-10-2018 IPR007213 Methyltransferase Ppm1/Ppm2/Tcmp GO:0008168|GO:0032259 JDM601_2175 daeb0b2b48556375d6e24620c27f1d50 277 Pfam PF04072 Leucine carboxyl methyltransferase 18 173 2.5E-15 T 12-10-2018 IPR007213 Methyltransferase Ppm1/Ppm2/Tcmp GO:0008168|GO:0032259 JDM601_2175 daeb0b2b48556375d6e24620c27f1d50 277 PIRSF PIRSF028177 2 277 2.9E-49 T 12-10-2018 IPR016874 Tetracenomycin polyketide synthesis O-methyltransferase TcmP GO:0017000|GO:1901106 JDM601_2175 daeb0b2b48556375d6e24620c27f1d50 277 Gene3D G3DSA:3.40.50.150 6 258 4.1E-33 T 12-10-2018 JDM601_2175 daeb0b2b48556375d6e24620c27f1d50 277 SUPERFAMILY SSF53335 11 250 1.19E-41 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JDM601_2649 f0fa3820cbe810d5b3665387f18aba22 189 Pfam PF05685 Putative restriction endonuclease 15 178 1.5E-26 T 12-10-2018 IPR008538 Domain of unknown function DUF820 JDM601_2649 f0fa3820cbe810d5b3665387f18aba22 189 Gene3D G3DSA:3.90.1570.10 7 187 2.7E-25 T 12-10-2018 JDM601_2649 f0fa3820cbe810d5b3665387f18aba22 189 SUPERFAMILY SSF52980 10 183 2.2E-23 T 12-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 JDM601_2559 1209c76a56ac2388ea7ea556ef9262da 311 Pfam PF00378 Enoyl-CoA hydratase/isomerase 11 233 3.6E-52 T 12-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 JDM601_2559 1209c76a56ac2388ea7ea556ef9262da 311 Gene3D G3DSA:3.90.226.10 1 231 6.7E-85 T 12-10-2018 JDM601_2559 1209c76a56ac2388ea7ea556ef9262da 311 SUPERFAMILY SSF52096 3 249 2.58E-67 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily JDM601_0841 f8ccf83af301138d97a9ea761accbd8c 755 SMART SM00926 12 67 4.1E-10 T 12-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 JDM601_0841 f8ccf83af301138d97a9ea761accbd8c 755 Gene3D G3DSA:3.40.50.740 78 487 7.0E-80 T 12-10-2018 JDM601_0841 f8ccf83af301138d97a9ea761accbd8c 755 Gene3D G3DSA:2.20.25.90 8 70 4.1E-8 T 12-10-2018 JDM601_0841 f8ccf83af301138d97a9ea761accbd8c 755 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 16 64 8.6E-10 T 12-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 JDM601_0841 f8ccf83af301138d97a9ea761accbd8c 755 SUPERFAMILY SSF50692 629 754 1.02E-25 T 12-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily JDM601_0841 f8ccf83af301138d97a9ea761accbd8c 755 Pfam PF00384 Molybdopterin oxidoreductase 72 449 2.3E-33 T 12-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 JDM601_0841 f8ccf83af301138d97a9ea761accbd8c 755 Pfam PF01568 Molydopterin dinucleotide binding domain 635 748 4.1E-16 T 12-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 JDM601_0841 f8ccf83af301138d97a9ea761accbd8c 755 Gene3D G3DSA:2.40.40.20 619 755 1.4E-20 T 12-10-2018 JDM601_0841 f8ccf83af301138d97a9ea761accbd8c 755 SUPERFAMILY SSF53706 15 487 7.33E-102 T 12-10-2018 JDM601_0841 f8ccf83af301138d97a9ea761accbd8c 755 Gene3D G3DSA:3.40.228.10 147 340 7.0E-80 T 12-10-2018 JDM601_2861 f568050a6f68da6e0795cc4e59859e52 233 Gene3D G3DSA:3.30.460.80 41 193 6.6E-49 T 12-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 JDM601_2861 f568050a6f68da6e0795cc4e59859e52 233 SUPERFAMILY SSF143243 75 229 6.41E-46 T 12-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 JDM601_2861 f568050a6f68da6e0795cc4e59859e52 233 Hamap MF_01357 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic [ndhJ]. 60 221 27.976 T 12-10-2018 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 JDM601_2861 f568050a6f68da6e0795cc4e59859e52 233 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 141 194 9.0E-23 T 12-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 JDM601_2861 f568050a6f68da6e0795cc4e59859e52 233 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 91 213 1.0E-39 T 12-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 JDM601_2861 f568050a6f68da6e0795cc4e59859e52 233 TIGRFAM TIGR01961 NuoC_fam: NADH (or F420H2) dehydrogenase, subunit C 92 212 2.4E-41 T 12-10-2018 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 JDM601_0517 ef71fa63fa69615a519748710394a930 437 SUPERFAMILY SSF140459 2 134 2.88E-41 T 12-10-2018 JDM601_0517 ef71fa63fa69615a519748710394a930 437 Pfam PF00823 PPE family 2 121 1.6E-41 T 12-10-2018 IPR000030 PPE family JDM601_0517 ef71fa63fa69615a519748710394a930 437 Gene3D G3DSA:1.20.1260.20 1 134 5.5E-42 T 12-10-2018 IPR038332 PPE superfamily JDM601_2171 1f6566b9e8053864f9e48ebfaf8ca17b 187 PIRSF PIRSF024492 13 186 1.3E-48 T 12-10-2018 IPR014519 Uncharacterised conserved protein UCP024492 JDM601_2171 1f6566b9e8053864f9e48ebfaf8ca17b 187 Pfam PF04343 Protein of unknown function, DUF488 27 147 1.1E-28 T 12-10-2018 IPR007438 Protein of unknown function DUF488 JDM601_1758 888b30d7f9ffee5d1f249f31cb250799 344 SUPERFAMILY SSF63829 112 341 1.05E-18 T 12-10-2018 JDM601_1758 888b30d7f9ffee5d1f249f31cb250799 344 Gene3D G3DSA:2.130.10.10 129 344 4.6E-7 T 12-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 JDM601_3359 79e22f18b9f0c1d074bc5f1b3a3673ce 481 PIRSF PIRSF036492 1 480 1.2E-145 T 12-10-2018 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent GO:0006081|GO:0055114 JDM601_3359 79e22f18b9f0c1d074bc5f1b3a3673ce 481 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 210 217 - T 12-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 JDM601_3359 79e22f18b9f0c1d074bc5f1b3a3673ce 481 Gene3D G3DSA:3.40.309.10 214 418 4.1E-140 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 JDM601_3359 79e22f18b9f0c1d074bc5f1b3a3673ce 481 SUPERFAMILY SSF53720 3 439 6.54E-107 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 JDM601_3359 79e22f18b9f0c1d074bc5f1b3a3673ce 481 Pfam PF00171 Aldehyde dehydrogenase family 26 438 2.3E-82 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 JDM601_3359 79e22f18b9f0c1d074bc5f1b3a3673ce 481 Gene3D G3DSA:3.40.605.10 13 438 4.1E-140 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 JDM601_0656 c03aee8d8fc62ed17e1d4b3a92e704d4 241 Pfam PF00753 Metallo-beta-lactamase superfamily 34 207 5.1E-15 T 12-10-2018 IPR001279 Metallo-beta-lactamase JDM601_0656 c03aee8d8fc62ed17e1d4b3a92e704d4 241 Gene3D G3DSA:3.60.15.10 22 238 7.6E-56 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like JDM601_0656 c03aee8d8fc62ed17e1d4b3a92e704d4 241 SUPERFAMILY SSF56281 32 233 1.49E-47 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like JDM601_0656 c03aee8d8fc62ed17e1d4b3a92e704d4 241 SMART SM00849 32 207 8.4E-33 T 12-10-2018 IPR001279 Metallo-beta-lactamase JDM601_3609 0bb643c7511873b80273439f5c65e0c6 416 Gene3D G3DSA:1.10.630.10 6 416 9.9E-124 T 12-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_3609 0bb643c7511873b80273439f5c65e0c6 416 Pfam PF00067 Cytochrome P450 291 380 8.5E-14 T 12-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_3609 0bb643c7511873b80273439f5c65e0c6 416 SUPERFAMILY SSF48264 19 414 4.45E-80 T 12-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_3609 0bb643c7511873b80273439f5c65e0c6 416 PRINTS PR00359 B-class P450 signature 366 377 3.5E-47 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3609 0bb643c7511873b80273439f5c65e0c6 416 PRINTS PR00359 B-class P450 signature 109 120 3.5E-47 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3609 0bb643c7511873b80273439f5c65e0c6 416 PRINTS PR00359 B-class P450 signature 290 301 3.5E-47 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3609 0bb643c7511873b80273439f5c65e0c6 416 PRINTS PR00359 B-class P450 signature 155 171 3.5E-47 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3609 0bb643c7511873b80273439f5c65e0c6 416 PRINTS PR00359 B-class P450 signature 307 334 3.5E-47 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3609 0bb643c7511873b80273439f5c65e0c6 416 PRINTS PR00359 B-class P450 signature 172 187 3.5E-47 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3609 0bb643c7511873b80273439f5c65e0c6 416 PRINTS PR00359 B-class P450 signature 357 366 3.5E-47 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3609 0bb643c7511873b80273439f5c65e0c6 416 PRINTS PR00359 B-class P450 signature 335 350 3.5E-47 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3609 0bb643c7511873b80273439f5c65e0c6 416 PRINTS PR00359 B-class P450 signature 211 233 3.5E-47 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_2909 09fdb6047b53b6a44c2bc7b7523f42fd 289 Gene3D G3DSA:3.40.50.720 92 289 1.2E-26 T 12-10-2018 JDM601_3187 5468a77452068eb3d78426941e9b7dba 744 SUPERFAMILY SSF53659 5 741 0.0 T 12-10-2018 JDM601_3187 5468a77452068eb3d78426941e9b7dba 744 TIGRFAM TIGR00178 monomer_idh: isocitrate dehydrogenase, NADP-dependent 1 741 0.0 T 12-10-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 JDM601_3187 5468a77452068eb3d78426941e9b7dba 744 Pfam PF03971 Monomeric isocitrate dehydrogenase 7 740 0.0 T 12-10-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 JDM601_3187 5468a77452068eb3d78426941e9b7dba 744 Gene3D G3DSA:3.40.718.10 404 662 6.8E-6 T 12-10-2018 JDM601_3187 5468a77452068eb3d78426941e9b7dba 744 PIRSF PIRSF009407 1 743 0.0 T 12-10-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 JDM601_3165 2dcf7b507210765714b1dd89496ade83 254 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 6 211 1.1E-41 T 12-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 JDM601_3165 2dcf7b507210765714b1dd89496ade83 254 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 79 112 - T 12-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 JDM601_3165 2dcf7b507210765714b1dd89496ade83 254 Gene3D G3DSA:3.30.950.10 114 234 6.3E-39 T 12-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 JDM601_3165 2dcf7b507210765714b1dd89496ade83 254 TIGRFAM TIGR01465 cobM_cbiF: precorrin-4 C11-methyltransferase 6 249 6.7E-81 T 12-10-2018 IPR006362 Cobalamin (vitamin B12) biosynthesis CobM/CbiF, precorrin-4 C11-methyltransferase GO:0009236|GO:0046026 JDM601_3165 2dcf7b507210765714b1dd89496ade83 254 SUPERFAMILY SSF53790 6 236 9.68E-60 T 12-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 JDM601_3165 2dcf7b507210765714b1dd89496ade83 254 Gene3D G3DSA:3.40.1010.10 2 113 3.4E-28 T 12-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 JDM601_3165 2dcf7b507210765714b1dd89496ade83 254 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 9 23 - T 12-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 JDM601_2359 50338ceb2bb0cafcfcb8c63533ac4f6a 398 Pfam PF12484 Polymorphic PE/PPE proteins C terminal 312 393 5.1E-9 T 12-10-2018 IPR022171 PPE family, C-terminal JDM601_2359 50338ceb2bb0cafcfcb8c63533ac4f6a 398 Pfam PF00823 PPE family 1 155 6.1E-54 T 12-10-2018 IPR000030 PPE family JDM601_2359 50338ceb2bb0cafcfcb8c63533ac4f6a 398 SUPERFAMILY SSF140459 1 167 2.2E-52 T 12-10-2018 JDM601_2359 50338ceb2bb0cafcfcb8c63533ac4f6a 398 Gene3D G3DSA:1.20.1260.20 1 170 1.5E-55 T 12-10-2018 IPR038332 PPE superfamily JDM601_4221 18126b9071a30d4cd72b5b71ef4abbd9 265 SUPERFAMILY SSF160104 29 226 6.8E-44 T 12-10-2018 IPR023375 Acetoacetate decarboxylase domain superfamily KEGG: 00072+4.1.1.4|KEGG: 00640+4.1.1.4|MetaCyc: PWY-5451|MetaCyc: PWY-6588|MetaCyc: PWY-6876|MetaCyc: PWY-7466 JDM601_4221 18126b9071a30d4cd72b5b71ef4abbd9 265 Pfam PF06314 Acetoacetate decarboxylase (ADC) 24 233 5.8E-45 T 12-10-2018 IPR010451 Acetoacetate decarboxylase GO:0016829 KEGG: 00072+4.1.1.4|KEGG: 00640+4.1.1.4|MetaCyc: PWY-5451|MetaCyc: PWY-6588|MetaCyc: PWY-6876|MetaCyc: PWY-7466 JDM601_4221 18126b9071a30d4cd72b5b71ef4abbd9 265 Gene3D G3DSA:2.40.400.10 24 236 5.6E-38 T 12-10-2018 IPR023375 Acetoacetate decarboxylase domain superfamily KEGG: 00072+4.1.1.4|KEGG: 00640+4.1.1.4|MetaCyc: PWY-5451|MetaCyc: PWY-6588|MetaCyc: PWY-6876|MetaCyc: PWY-7466 JDM601_3748 d785d521c16ea9f366627fb11f6bdb67 147 Gene3D G3DSA:3.10.129.10 7 136 1.8E-31 T 12-10-2018 JDM601_3748 d785d521c16ea9f366627fb11f6bdb67 147 Pfam PF01575 MaoC like domain 21 109 3.7E-16 T 12-10-2018 IPR002539 MaoC-like dehydratase domain JDM601_3748 d785d521c16ea9f366627fb11f6bdb67 147 SUPERFAMILY SSF54637 7 139 2.16E-26 T 12-10-2018 IPR029069 HotDog domain superfamily JDM601_1589 1e128d341c748839cf69f879d339e97a 443 SUPERFAMILY SSF53850 43 438 2.17E-58 T 12-10-2018 JDM601_1589 1e128d341c748839cf69f879d339e97a 443 Pfam PF01547 Bacterial extracellular solute-binding protein 52 353 6.9E-40 T 12-10-2018 IPR006059 Bacterial extracellular solute-binding protein JDM601_1589 1e128d341c748839cf69f879d339e97a 443 Gene3D G3DSA:3.40.190.10 36 443 1.7E-107 T 12-10-2018 JDM601_4098 86c322ad53f6e15d5224749761a94ea7 464 Gene3D G3DSA:3.30.465.10 78 199 7.5E-25 T 12-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 JDM601_4098 86c322ad53f6e15d5224749761a94ea7 464 SUPERFAMILY SSF56176 13 196 2.52E-37 T 12-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 JDM601_4098 86c322ad53f6e15d5224749761a94ea7 464 Pfam PF04030 D-arabinono-1,4-lactone oxidase 399 460 1.1E-8 T 12-10-2018 IPR007173 D-arabinono-1,4-lactone oxidase GO:0003885|GO:0016020|GO:0055114 JDM601_4098 86c322ad53f6e15d5224749761a94ea7 464 Pfam PF01565 FAD binding domain 31 164 3.0E-25 T 12-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 JDM601_4098 86c322ad53f6e15d5224749761a94ea7 464 Gene3D G3DSA:3.30.43.10 3 77 7.5E-25 T 12-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 JDM601_4085 98aef48b6851786513ba0c4f30ea7435 115 PIRSF PIRSF033490 1 115 2.5E-42 T 12-10-2018 IPR003477 mRNA interferase PemK-like GO:0003677 JDM601_4085 98aef48b6851786513ba0c4f30ea7435 115 Pfam PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system 2 112 1.2E-28 T 12-10-2018 IPR003477 mRNA interferase PemK-like GO:0003677 JDM601_4085 98aef48b6851786513ba0c4f30ea7435 115 Gene3D G3DSA:2.30.30.110 1 115 3.6E-36 T 12-10-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor JDM601_4085 98aef48b6851786513ba0c4f30ea7435 115 SUPERFAMILY SSF50118 1 115 2.4E-31 T 12-10-2018 JDM601_0119 5ea6c2e96d41fbac572eb9170144e8cc 543 Gene3D G3DSA:3.40.50.12780 13 422 3.3E-119 T 12-10-2018 JDM601_0119 5ea6c2e96d41fbac572eb9170144e8cc 543 Pfam PF00501 AMP-binding enzyme 24 429 6.9E-106 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 JDM601_0119 5ea6c2e96d41fbac572eb9170144e8cc 543 Pfam PF13193 AMP-binding enzyme C-terminal domain 438 512 3.4E-17 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain JDM601_0119 5ea6c2e96d41fbac572eb9170144e8cc 543 ProSitePatterns PS00455 Putative AMP-binding domain signature. 182 193 - T 12-10-2018 IPR020845 AMP-binding, conserved site JDM601_0119 5ea6c2e96d41fbac572eb9170144e8cc 543 Gene3D G3DSA:3.30.300.310 425 527 9.3E-32 T 12-10-2018 JDM601_0119 5ea6c2e96d41fbac572eb9170144e8cc 543 SUPERFAMILY SSF56801 15 524 2.35E-151 T 12-10-2018 JDM601_1501 3d4b0a9b51453f2eb01e477b0d27a8bd 520 Pfam PF03772 Competence protein 225 487 4.1E-47 T 12-10-2018 IPR004477 ComEC/Rec2-related protein JDM601_1501 3d4b0a9b51453f2eb01e477b0d27a8bd 520 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 247 414 2.3E-13 T 12-10-2018 IPR004477 ComEC/Rec2-related protein JDM601_0900 2e73414d3055629854268eaec0942d42 277 Gene3D G3DSA:3.20.20.30 5 274 8.1E-66 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 JDM601_0900 2e73414d3055629854268eaec0942d42 277 SUPERFAMILY SSF51679 13 269 1.3E-57 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 JDM601_0900 2e73414d3055629854268eaec0942d42 277 TIGRFAM TIGR03619 F420_Rv2161c: probable F420-dependent oxidoreductase, Rv2161c family 13 253 2.9E-79 T 12-10-2018 IPR019921 Luciferase-like, F420-dependent oxidoreductase, Rv2161c, predicted JDM601_0900 2e73414d3055629854268eaec0942d42 277 Pfam PF00296 Luciferase-like monooxygenase 13 225 5.7E-51 T 12-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 JDM601_3452 742ad8ecffb3c387bd4b430451ff051c 252 Gene3D G3DSA:3.40.50.1820 2 242 2.7E-43 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_3452 742ad8ecffb3c387bd4b430451ff051c 252 Pfam PF12697 Alpha/beta hydrolase family 3 235 3.6E-20 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 JDM601_3452 742ad8ecffb3c387bd4b430451ff051c 252 SUPERFAMILY SSF53474 3 238 1.5E-24 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_0712 27ea7365e55b562633b06e1aaaf1b376 521 Gene3D G3DSA:3.20.20.240 1 521 6.6E-217 T 12-10-2018 JDM601_0712 27ea7365e55b562633b06e1aaaf1b376 521 Pfam PF01642 Methylmalonyl-CoA mutase 2 513 2.3E-197 T 12-10-2018 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic GO:0016866|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 JDM601_0712 27ea7365e55b562633b06e1aaaf1b376 521 SUPERFAMILY SSF51703 2 515 3.4E-186 T 12-10-2018 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic GO:0003824|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 JDM601_0712 27ea7365e55b562633b06e1aaaf1b376 521 TIGRFAM TIGR00641 acid_CoA_mut_N: methylmalonyl-CoA mutase N-terminal domain 2 518 1.2E-198 T 12-10-2018 IPR006098 Methylmalonyl-CoA mutase, alpha chain, catalytic GO:0004494|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 JDM601_0586 fd6b260f5249169cb5433dc1f15a1897 281 SUPERFAMILY SSF53335 8 203 7.32E-33 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JDM601_0586 fd6b260f5249169cb5433dc1f15a1897 281 Pfam PF08241 Methyltransferase domain 48 141 7.6E-15 T 12-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 JDM601_0586 fd6b260f5249169cb5433dc1f15a1897 281 Gene3D G3DSA:3.40.50.150 29 277 9.3E-37 T 12-10-2018 JDM601_2189 889e5d893dbc8a176b5cbbf05661bfa1 191 Pfam PF08241 Methyltransferase domain 42 136 5.4E-16 T 12-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 JDM601_2189 889e5d893dbc8a176b5cbbf05661bfa1 191 Gene3D G3DSA:3.40.50.150 5 190 5.9E-30 T 12-10-2018 JDM601_2189 889e5d893dbc8a176b5cbbf05661bfa1 191 SUPERFAMILY SSF53335 22 178 1.25E-28 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JDM601_2262 014c7e1e68074f0617d49a7d48d78850 529 Gene3D G3DSA:1.20.1260.20 1 172 7.9E-62 T 12-10-2018 IPR038332 PPE superfamily JDM601_2262 014c7e1e68074f0617d49a7d48d78850 529 SUPERFAMILY SSF140459 1 171 7.06E-60 T 12-10-2018 JDM601_2262 014c7e1e68074f0617d49a7d48d78850 529 Pfam PF00823 PPE family 2 158 6.8E-61 T 12-10-2018 IPR000030 PPE family JDM601_0672 bc9fc4f2b17bfe95e0004cfa7108a7ae 105 Gene3D G3DSA:2.30.30.110 1 105 1.5E-15 T 12-10-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor JDM601_0672 bc9fc4f2b17bfe95e0004cfa7108a7ae 105 Pfam PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system 2 101 2.8E-15 T 12-10-2018 IPR003477 mRNA interferase PemK-like GO:0003677 JDM601_0672 bc9fc4f2b17bfe95e0004cfa7108a7ae 105 SUPERFAMILY SSF50118 2 103 4.41E-18 T 12-10-2018 JDM601_1941 879a2433e601c887bd6899f7a54da3ae 138 Pfam PF03965 Penicillinase repressor 7 120 6.0E-30 T 12-10-2018 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 JDM601_1941 879a2433e601c887bd6899f7a54da3ae 138 Gene3D G3DSA:1.10.10.10 1 72 1.4E-32 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JDM601_1941 879a2433e601c887bd6899f7a54da3ae 138 SUPERFAMILY SSF46785 5 123 3.03E-29 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JDM601_1941 879a2433e601c887bd6899f7a54da3ae 138 PIRSF PIRSF019455 1 129 7.4E-23 T 12-10-2018 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 JDM601_1136 7d15035bf40fdbe0c771bb9896404d6e 212 SUPERFAMILY SSF53335 19 210 7.52E-32 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JDM601_1136 7d15035bf40fdbe0c771bb9896404d6e 212 Pfam PF13489 Methyltransferase domain 27 182 7.3E-16 T 12-10-2018 JDM601_1136 7d15035bf40fdbe0c771bb9896404d6e 212 Gene3D G3DSA:3.40.50.150 18 193 1.5E-25 T 12-10-2018 JDM601_3209 ac76885560a177399992d3b1f82ff547 368 SUPERFAMILY SSF56784 129 362 8.68E-42 T 12-10-2018 IPR036412 HAD-like superfamily JDM601_3209 ac76885560a177399992d3b1f82ff547 368 Gene3D G3DSA:3.30.70.1020 210 285 1.5E-47 T 12-10-2018 JDM601_3209 ac76885560a177399992d3b1f82ff547 368 Gene3D G3DSA:3.40.50.1000 49 90 7.9E-6 T 12-10-2018 IPR023214 HAD superfamily JDM601_3209 ac76885560a177399992d3b1f82ff547 368 SUPERFAMILY SSF56784 48 92 2.06E-5 T 12-10-2018 IPR036412 HAD-like superfamily JDM601_3209 ac76885560a177399992d3b1f82ff547 368 Gene3D G3DSA:3.40.50.1000 130 348 1.5E-47 T 12-10-2018 IPR023214 HAD superfamily JDM601_3209 ac76885560a177399992d3b1f82ff547 368 Pfam PF02358 Trehalose-phosphatase 131 351 1.2E-64 T 12-10-2018 IPR003337 Trehalose-phosphatase GO:0003824|GO:0005992 JDM601_3209 ac76885560a177399992d3b1f82ff547 368 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 130 322 1.8E-14 T 12-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 JDM601_3209 ac76885560a177399992d3b1f82ff547 368 TIGRFAM TIGR00685 T6PP: trehalose-phosphatase 128 362 1.2E-73 T 12-10-2018 IPR003337 Trehalose-phosphatase GO:0003824|GO:0005992 JDM601_3469 924ed147521b892bf3868c95989fa5f5 387 Pfam PF02470 MlaD protein 45 118 1.1E-11 T 12-10-2018 IPR003399 Mce/MlaD JDM601_3469 924ed147521b892bf3868c95989fa5f5 387 TIGRFAM TIGR00996 Mtu_fam_mce: virulence factor Mce family protein 14 295 6.0E-58 T 12-10-2018 IPR005693 Virulence factor Mce protein JDM601_1767 5b8aeabcddb7a744575bdfa53a5cd352 291 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 8 282 17.137 T 12-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 JDM601_1767 5b8aeabcddb7a744575bdfa53a5cd352 291 TIGRFAM TIGR00753 undec_PP_bacA: undecaprenyl-diphosphatase UppP 13 275 3.7E-90 T 12-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 JDM601_1767 5b8aeabcddb7a744575bdfa53a5cd352 291 Pfam PF02673 Bacitracin resistance protein BacA 14 276 1.4E-75 T 12-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 JDM601_2230 6f72e726a31b7f79fbb4f098aa50f0ec 343 Pfam PF00762 Ferrochelatase 4 302 2.1E-94 T 12-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 JDM601_2230 6f72e726a31b7f79fbb4f098aa50f0ec 343 Gene3D G3DSA:3.40.50.1400 6 298 3.6E-111 T 12-10-2018 JDM601_2230 6f72e726a31b7f79fbb4f098aa50f0ec 343 TIGRFAM TIGR00109 hemH: ferrochelatase 5 299 7.7E-43 T 12-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 JDM601_2230 6f72e726a31b7f79fbb4f098aa50f0ec 343 Hamap MF_00323 Ferrochelatase [hemH]. 2 304 30.629 T 12-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 JDM601_2230 6f72e726a31b7f79fbb4f098aa50f0ec 343 SUPERFAMILY SSF53800 3 308 1.54E-82 T 12-10-2018 JDM601_2230 6f72e726a31b7f79fbb4f098aa50f0ec 343 Gene3D G3DSA:3.40.50.1400 142 285 3.6E-111 T 12-10-2018 JDM601_0160 8e620ea9ffce2f486cd0ced3cc0cb4a8 383 SUPERFAMILY SSF141523 238 365 1.16E-29 T 12-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like JDM601_0160 8e620ea9ffce2f486cd0ced3cc0cb4a8 383 Gene3D G3DSA:2.40.440.10 238 367 3.1E-48 T 12-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like JDM601_0160 8e620ea9ffce2f486cd0ced3cc0cb4a8 383 Gene3D G3DSA:2.60.40.3710 146 237 2.4E-30 T 12-10-2018 JDM601_0160 8e620ea9ffce2f486cd0ced3cc0cb4a8 383 Pfam PF03734 L,D-transpeptidase catalytic domain 245 365 2.6E-20 T 12-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 JDM601_3950 b77e104b641f94f889e85bee591f9cb8 250 Pfam PF00293 NUDIX domain 79 178 1.6E-12 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 JDM601_3950 b77e104b641f94f889e85bee591f9cb8 250 Gene3D G3DSA:3.90.79.10 27 223 4.5E-40 T 12-10-2018 JDM601_3950 b77e104b641f94f889e85bee591f9cb8 250 SUPERFAMILY SSF55811 78 216 2.84E-26 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 JDM601_3618 702d1f6af3358478c727fd08d8ebfd0c 275 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 21 247 1.6E-58 T 12-10-2018 JDM601_3618 702d1f6af3358478c727fd08d8ebfd0c 275 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 12 191 6.9E-4 T 12-10-2018 JDM601_3618 702d1f6af3358478c727fd08d8ebfd0c 275 SUPERFAMILY SSF51735 10 250 6.42E-71 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_3618 702d1f6af3358478c727fd08d8ebfd0c 275 Gene3D G3DSA:3.40.50.720 3 273 1.3E-81 T 12-10-2018 JDM601_3618 702d1f6af3358478c727fd08d8ebfd0c 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 1.7E-28 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3618 702d1f6af3358478c727fd08d8ebfd0c 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 212 232 1.7E-28 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3618 702d1f6af3358478c727fd08d8ebfd0c 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 1.7E-28 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3618 702d1f6af3358478c727fd08d8ebfd0c 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 13 30 1.7E-28 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3618 702d1f6af3358478c727fd08d8ebfd0c 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 1.7E-28 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3618 702d1f6af3358478c727fd08d8ebfd0c 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 1.7E-28 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0832 7c135370e2596b971c519e3f245ad2fd 528 Pfam PF00005 ABC transporter 355 476 2.3E-11 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JDM601_0832 7c135370e2596b971c519e3f245ad2fd 528 SUPERFAMILY SSF52540 24 226 1.6E-35 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_0832 7c135370e2596b971c519e3f245ad2fd 528 SMART SM00382 36 221 6.2E-5 T 12-10-2018 IPR003593 AAA+ ATPase domain JDM601_0832 7c135370e2596b971c519e3f245ad2fd 528 SMART SM00382 360 523 4.0E-8 T 12-10-2018 IPR003593 AAA+ ATPase domain JDM601_0832 7c135370e2596b971c519e3f245ad2fd 528 SUPERFAMILY SSF52540 355 510 1.92E-30 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_0832 7c135370e2596b971c519e3f245ad2fd 528 Pfam PF00005 ABC transporter 39 177 1.9E-15 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JDM601_0832 7c135370e2596b971c519e3f245ad2fd 528 Gene3D G3DSA:3.40.50.300 352 526 3.8E-33 T 12-10-2018 JDM601_0832 7c135370e2596b971c519e3f245ad2fd 528 Gene3D G3DSA:3.40.50.300 8 311 2.9E-45 T 12-10-2018 JDM601_1419 bd2f5b9180d44820ccb69ef2d3c069a4 349 Pfam PF02780 Transketolase, C-terminal domain 216 337 9.9E-35 T 12-10-2018 IPR033248 Transketolase, C-terminal domain JDM601_1419 bd2f5b9180d44820ccb69ef2d3c069a4 349 Gene3D G3DSA:3.40.50.920 219 348 1.1E-44 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 JDM601_1419 bd2f5b9180d44820ccb69ef2d3c069a4 349 Gene3D G3DSA:3.40.50.970 24 218 1.2E-72 T 12-10-2018 JDM601_1419 bd2f5b9180d44820ccb69ef2d3c069a4 349 SUPERFAMILY SSF52922 215 346 7.85E-36 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 JDM601_1419 bd2f5b9180d44820ccb69ef2d3c069a4 349 SMART SM00861 27 202 2.8E-64 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain JDM601_1419 bd2f5b9180d44820ccb69ef2d3c069a4 349 SUPERFAMILY SSF52518 26 205 6.34E-63 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold JDM601_1419 bd2f5b9180d44820ccb69ef2d3c069a4 349 Pfam PF02779 Transketolase, pyrimidine binding domain 26 200 9.4E-43 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain JDM601_3639 6468946e616f2fa71ba54d352955eb01 230 Pfam PF13471 Transglutaminase-like superfamily 134 228 2.2E-20 T 12-10-2018 IPR032708 Microcin J25-processing protein McjB, C-terminal JDM601_2043 b9d5c1a92cf5bbc3d7c223631e9e0318 141 SUPERFAMILY SSF54427 5 115 4.52E-11 T 12-10-2018 IPR032710 NTF2-like domain superfamily JDM601_2043 b9d5c1a92cf5bbc3d7c223631e9e0318 141 Gene3D G3DSA:3.10.450.50 5 131 2.7E-21 T 12-10-2018 JDM601_2324 500ce047cd735226e0d18d9dd0f4671b 75 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 51 62 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site JDM601_2324 500ce047cd735226e0d18d9dd0f4671b 75 Pfam PF12838 4Fe-4S dicluster domain 19 65 1.3E-9 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain JDM601_2324 500ce047cd735226e0d18d9dd0f4671b 75 SUPERFAMILY SSF54862 7 68 4.19E-16 T 12-10-2018 JDM601_2324 500ce047cd735226e0d18d9dd0f4671b 75 Gene3D G3DSA:3.30.70.20 11 71 2.4E-14 T 12-10-2018 JDM601_2618 a57f6519f8ff6f77565acfbe2f02342b 503 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 401 497 3.8E-23 T 12-10-2018 IPR025158 Mg chelatase-related protein, C-terminal domain JDM601_2618 a57f6519f8ff6f77565acfbe2f02342b 503 SUPERFAMILY SSF54211 3 168 6.07E-36 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold JDM601_2618 a57f6519f8ff6f77565acfbe2f02342b 503 SUPERFAMILY SSF52540 188 500 2.04E-42 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_2618 a57f6519f8ff6f77565acfbe2f02342b 503 Pfam PF13541 Subunit ChlI of Mg-chelatase 21 143 6.2E-38 T 12-10-2018 JDM601_2618 a57f6519f8ff6f77565acfbe2f02342b 503 Pfam PF01078 Magnesium chelatase, subunit ChlI 190 392 1.9E-84 T 12-10-2018 IPR000523 Magnesium chelatase ChlI domain JDM601_2618 a57f6519f8ff6f77565acfbe2f02342b 503 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 7 497 1.1E-139 T 12-10-2018 IPR004482 Mg chelatase-related protein JDM601_2618 a57f6519f8ff6f77565acfbe2f02342b 503 SMART SM00382 210 392 1.4E-7 T 12-10-2018 IPR003593 AAA+ ATPase domain JDM601_2618 a57f6519f8ff6f77565acfbe2f02342b 503 Gene3D G3DSA:3.40.50.300 188 499 3.7E-40 T 12-10-2018 JDM601_2618 a57f6519f8ff6f77565acfbe2f02342b 503 Gene3D G3DSA:3.30.230.10 2 167 9.1E-15 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup JDM601_2450 f6197c939e8b772afa6c8677adcd72d3 319 PIRSF PIRSF035875 1 302 2.8E-54 T 12-10-2018 IPR017039 Virulence factor BrkB JDM601_2450 f6197c939e8b772afa6c8677adcd72d3 319 Pfam PF03631 Virulence factor BrkB 26 283 8.9E-44 T 12-10-2018 IPR017039 Virulence factor BrkB JDM601_1515 8702cb10393edee67cb41fc9f06763f8 343 TIGRFAM TIGR00968 3a0106s01: sulfate ABC transporter, ATP-binding protein 5 241 4.1E-126 T 12-10-2018 IPR005666 Sulphate transport system permease protein 1 GO:0008272|GO:0015419|GO:0016020|GO:0043190 KEGG: 00920+3.6.3.25 JDM601_1515 8702cb10393edee67cb41fc9f06763f8 343 SMART SM00382 29 212 6.8E-19 T 12-10-2018 IPR003593 AAA+ ATPase domain JDM601_1515 8702cb10393edee67cb41fc9f06763f8 343 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JDM601_1515 8702cb10393edee67cb41fc9f06763f8 343 Pfam PF00005 ABC transporter 20 162 9.3E-37 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JDM601_1515 8702cb10393edee67cb41fc9f06763f8 343 Pfam PF12857 TOBE-like domain 269 325 8.2E-10 T 12-10-2018 IPR024765 TOBE-like domain KEGG: 00920+3.6.3.25 JDM601_1515 8702cb10393edee67cb41fc9f06763f8 343 SUPERFAMILY SSF50331 241 324 1.26E-6 T 12-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal JDM601_1515 8702cb10393edee67cb41fc9f06763f8 343 SUPERFAMILY SSF52540 5 240 7.14E-87 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_1515 8702cb10393edee67cb41fc9f06763f8 343 Gene3D G3DSA:3.40.50.300 1 239 1.3E-81 T 12-10-2018 JDM601_3896 9ecd71bc9a07868a8de636101281a0a5 129 TIGRFAM TIGR00526 folB_dom: FolB domain 3 120 1.1E-31 T 12-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 JDM601_3896 9ecd71bc9a07868a8de636101281a0a5 129 SMART SM00905 5 117 1.1E-46 T 12-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 JDM601_3896 9ecd71bc9a07868a8de636101281a0a5 129 SUPERFAMILY SSF55620 3 119 1.06E-34 T 12-10-2018 JDM601_3896 9ecd71bc9a07868a8de636101281a0a5 129 Gene3D G3DSA:3.30.1130.10 1 119 4.4E-42 T 12-10-2018 JDM601_3896 9ecd71bc9a07868a8de636101281a0a5 129 Pfam PF02152 Dihydroneopterin aldolase 5 114 1.8E-32 T 12-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 JDM601_3896 9ecd71bc9a07868a8de636101281a0a5 129 TIGRFAM TIGR00525 folB: dihydroneopterin aldolase 3 116 1.4E-36 T 12-10-2018 IPR006156 Dihydroneopterin aldolase GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 JDM601_3044 d119a41be4126becabdebc394933d429 138 Pfam PF02657 Fe-S metabolism associated domain 12 133 4.4E-27 T 12-10-2018 IPR003808 Fe-S metabolism associated domain, SufE-like JDM601_3044 d119a41be4126becabdebc394933d429 138 SUPERFAMILY SSF82649 2 135 1.52E-26 T 12-10-2018 JDM601_3044 d119a41be4126becabdebc394933d429 138 Gene3D G3DSA:3.90.1010.10 2 138 1.2E-45 T 12-10-2018 JDM601_2666 509f7ad2f2dd9108fc1c4ec94f5d8910 418 SMART SM00507 297 348 9.5E-14 T 12-10-2018 IPR003615 HNH nuclease JDM601_2666 509f7ad2f2dd9108fc1c4ec94f5d8910 418 Pfam PF01844 HNH endonuclease 314 352 4.7E-7 T 12-10-2018 IPR002711 HNH endonuclease GO:0003676|GO:0004519 JDM601_2666 509f7ad2f2dd9108fc1c4ec94f5d8910 418 Pfam PF02720 Domain of unknown function (DUF222) 25 306 7.1E-60 T 12-10-2018 IPR003870 Domain of unknown function DUF222 JDM601_3160 007b70df00f8fedcba4494edd57db0a2 203 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 61 6.5E-8 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_3160 007b70df00f8fedcba4494edd57db0a2 203 Gene3D G3DSA:1.10.357.10 3 202 1.3E-15 T 12-10-2018 JDM601_3160 007b70df00f8fedcba4494edd57db0a2 203 SUPERFAMILY SSF46689 4 78 2.57E-12 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JDM601_2943 fe41bd5fae121523f6ec70367d8bea83 394 Gene3D G3DSA:2.40.110.10 137 240 3.0E-38 T 12-10-2018 JDM601_2943 fe41bd5fae121523f6ec70367d8bea83 394 Gene3D G3DSA:1.10.540.10 2 135 2.2E-36 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 JDM601_2943 fe41bd5fae121523f6ec70367d8bea83 394 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 240 386 4.1E-27 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 JDM601_2943 fe41bd5fae121523f6ec70367d8bea83 394 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 138 228 2.1E-26 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 JDM601_2943 fe41bd5fae121523f6ec70367d8bea83 394 SUPERFAMILY SSF56645 9 238 1.23E-77 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 JDM601_2943 fe41bd5fae121523f6ec70367d8bea83 394 Gene3D G3DSA:1.20.140.10 245 394 9.0E-36 T 12-10-2018 JDM601_2943 fe41bd5fae121523f6ec70367d8bea83 394 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 23 134 3.7E-26 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 JDM601_2943 fe41bd5fae121523f6ec70367d8bea83 394 SUPERFAMILY SSF47203 245 390 2.74E-37 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 JDM601_1458 180037c82aea954f23e81d16a5d701f2 197 Pfam PF06078 Bacterial protein of unknown function (DUF937) 10 128 2.5E-19 T 12-10-2018 IPR009282 Protein of unknown function DUF937 JDM601_2297 0951cf575ef1ec6701b75f8767a85c94 670 Hamap MF_00983 Probable primosomal protein N' [priA]. 24 669 21.207 T 12-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 JDM601_2297 0951cf575ef1ec6701b75f8767a85c94 670 SUPERFAMILY SSF52540 184 268 5.11E-5 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_2297 0951cf575ef1ec6701b75f8767a85c94 670 Gene3D G3DSA:3.40.50.300 159 325 9.1E-31 T 12-10-2018 JDM601_2297 0951cf575ef1ec6701b75f8767a85c94 670 Gene3D G3DSA:1.10.8.630 18 129 4.5E-14 T 12-10-2018 JDM601_2041 4de326fd1d43161d06503d80141511a7 209 Gene3D G3DSA:3.40.50.720 3 201 1.2E-49 T 12-10-2018 JDM601_2041 4de326fd1d43161d06503d80141511a7 209 SUPERFAMILY SSF51735 4 189 5.49E-38 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_2041 4de326fd1d43161d06503d80141511a7 209 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 4 91 4.0E-16 T 12-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal JDM601_3554 7f01fd71d685e1664a11ede2b65d10e9 281 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 6 273 6.9E-55 T 12-10-2018 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: R-HSA-71262 JDM601_3554 7f01fd71d685e1664a11ede2b65d10e9 281 Gene3D G3DSA:3.60.130.10 3 281 1.3E-72 T 12-10-2018 JDM601_3554 7f01fd71d685e1664a11ede2b65d10e9 281 SUPERFAMILY SSF51197 4 280 5.49E-68 T 12-10-2018 JDM601_2080 cd3b31194f6ac71d20eea4f7020f162d 111 Pfam PF05305 Protein of unknown function (DUF732) 7 99 1.4E-25 T 12-10-2018 IPR007969 Domain of unknown function DUF732 JDM601_1238 7fe626f6d6e08ff389721e703062ca18 185 ProDom PD103646 LIPOPROTEIN LPRB MEMBRANE PRECURSOR PALMITATE SIGNAL 7 185 5.0E-72 T 12-10-2018 JDM601_1238 7fe626f6d6e08ff389721e703062ca18 185 Pfam PF12079 Protein of unknown function (DUF3558) 21 183 1.3E-39 T 12-10-2018 IPR024520 Protein of unknown function DUF3558 JDM601_4029 d22ceb0500b9328d4d419f23c0f67af8 452 SUPERFAMILY SSF52777 74 160 1.05E-7 T 12-10-2018 JDM601_4029 d22ceb0500b9328d4d419f23c0f67af8 452 Gene3D G3DSA:3.30.559.10 114 194 7.3E-10 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 JDM601_4029 d22ceb0500b9328d4d419f23c0f67af8 452 Pfam PF06974 Protein of unknown function (DUF1298) 301 446 1.1E-39 T 12-10-2018 IPR009721 O-acyltransferase WSD1, C-terminal GO:0004144 KEGG: 00073+2.3.1.20|KEGG: 00561+2.3.1.20 JDM601_4029 d22ceb0500b9328d4d419f23c0f67af8 452 SUPERFAMILY SSF52777 242 446 5.89E-6 T 12-10-2018 JDM601_4029 d22ceb0500b9328d4d419f23c0f67af8 452 TIGRFAM TIGR02946 acyl_WS_DGAT: acyltransferase, WS/DGAT/MGAT 4 449 1.2E-154 T 12-10-2018 IPR014292 Acyltransferase, WS/DGAT/MGAT GO:0016746|GO:0045017 KEGG: 00073+2.3.1.20|KEGG: 00561+2.3.1.20 JDM601_4029 d22ceb0500b9328d4d419f23c0f67af8 452 Pfam PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain 4 260 3.3E-85 T 12-10-2018 IPR004255 O-acyltransferase, WSD1, N-terminal GO:0004144|GO:0045017 KEGG: 00073+2.3.1.20|KEGG: 00561+2.3.1.20 JDM601_4029 d22ceb0500b9328d4d419f23c0f67af8 452 Gene3D G3DSA:3.30.559.30 195 313 7.3E-10 T 12-10-2018 JDM601_4192 de64238effa173dbef4a85777379d721 212 Pfam PF13649 Methyltransferase domain 54 143 7.1E-22 T 12-10-2018 JDM601_4192 de64238effa173dbef4a85777379d721 212 SUPERFAMILY SSF53335 9 199 7.12E-39 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JDM601_4192 de64238effa173dbef4a85777379d721 212 Gene3D G3DSA:3.40.50.150 11 202 1.5E-38 T 12-10-2018 JDM601_1691 732121f08a8e045efd24ea82027ef223 362 SUPERFAMILY SSF55073 204 359 5.18E-37 T 12-10-2018 IPR029787 Nucleotide cyclase JDM601_1691 732121f08a8e045efd24ea82027ef223 362 SMART SM00044 166 341 2.0E-4 T 12-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 JDM601_1691 732121f08a8e045efd24ea82027ef223 362 Gene3D G3DSA:3.30.70.1230 194 357 2.6E-40 T 12-10-2018 IPR029787 Nucleotide cyclase JDM601_1691 732121f08a8e045efd24ea82027ef223 362 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 203 349 1.6E-13 T 12-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 JDM601_1429 d63c5f3f3e87d456885c18686d824639 170 Gene3D G3DSA:2.50.20.20 1 166 2.5E-54 T 12-10-2018 JDM601_1429 d63c5f3f3e87d456885c18686d824639 170 Pfam PF07161 LppX_LprAFG lipoprotein 2 165 3.4E-46 T 12-10-2018 IPR009830 LppX/LprAFG lipoprotein family JDM601_1429 d63c5f3f3e87d456885c18686d824639 170 ProDom PD017293 LIPOPROTEIN MEMBRANE PRECURSOR PALMITATE SIGNAL ANTIGEN LPRG LPPX P27 LPRA 1 165 2.0E-34 T 12-10-2018 IPR009830 LppX/LprAFG lipoprotein family JDM601_1429 d63c5f3f3e87d456885c18686d824639 170 SUPERFAMILY SSF89392 3 165 1.33E-33 T 12-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX JDM601_2219 202358f01000366624faefc2305f3405 421 SUPERFAMILY SSF56601 25 372 5.63E-60 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like JDM601_2219 202358f01000366624faefc2305f3405 421 Pfam PF00144 Beta-lactamase 37 378 4.4E-57 T 12-10-2018 IPR001466 Beta-lactamase-related JDM601_2219 202358f01000366624faefc2305f3405 421 Gene3D G3DSA:3.40.710.30 17 397 4.8E-98 T 12-10-2018 JDM601_0489 62ce32f15a82ec3f7617d4f520cf51fa 238 SUPERFAMILY SSF52540 2 225 5.94E-67 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_0489 62ce32f15a82ec3f7617d4f520cf51fa 238 Pfam PF00005 ABC transporter 22 170 3.8E-31 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JDM601_0489 62ce32f15a82ec3f7617d4f520cf51fa 238 Gene3D G3DSA:3.40.50.300 1 231 9.3E-63 T 12-10-2018 JDM601_0489 62ce32f15a82ec3f7617d4f520cf51fa 238 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JDM601_0489 62ce32f15a82ec3f7617d4f520cf51fa 238 SMART SM00382 31 224 1.1E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain JDM601_3678 22d2ca86104ac70f792bfbf71aa42987 698 Gene3D G3DSA:3.40.50.300 234 367 1.1E-27 T 12-10-2018 JDM601_3678 22d2ca86104ac70f792bfbf71aa42987 698 SUPERFAMILY SSF53271 573 695 7.66E-8 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like JDM601_3678 22d2ca86104ac70f792bfbf71aa42987 698 SUPERFAMILY SSF52540 70 363 2.93E-49 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_3678 22d2ca86104ac70f792bfbf71aa42987 698 Pfam PF00271 Helicase conserved C-terminal domain 248 342 1.8E-12 T 12-10-2018 IPR001650 Helicase, C-terminal JDM601_3678 22d2ca86104ac70f792bfbf71aa42987 698 Gene3D G3DSA:3.40.50.300 2 212 4.2E-53 T 12-10-2018 JDM601_3678 22d2ca86104ac70f792bfbf71aa42987 698 Pfam PF00270 DEAD/DEAH box helicase 28 199 2.9E-16 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 JDM601_3678 22d2ca86104ac70f792bfbf71aa42987 698 Gene3D G3DSA:1.10.10.10 432 519 1.9E-5 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JDM601_3678 22d2ca86104ac70f792bfbf71aa42987 698 SUPERFAMILY SSF53271 655 695 2.89E-8 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like JDM601_3678 22d2ca86104ac70f792bfbf71aa42987 698 SMART SM00487 22 228 3.5E-22 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain JDM601_3678 22d2ca86104ac70f792bfbf71aa42987 698 SMART SM00490 262 343 1.1E-19 T 12-10-2018 IPR001650 Helicase, C-terminal JDM601_3678 22d2ca86104ac70f792bfbf71aa42987 698 Gene3D G3DSA:3.40.50.2020 555 696 1.1E-5 T 12-10-2018 JDM601_3678 22d2ca86104ac70f792bfbf71aa42987 698 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 23 359 7.2E-69 T 12-10-2018 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 JDM601_0298 54da0c5d276111e2fbc2456cdf810b52 480 Pfam PF08817 WXG100 protein secretion system (Wss), protein YukD 14 97 1.8E-21 T 12-10-2018 IPR024962 YukD-like JDM601_0298 54da0c5d276111e2fbc2456cdf810b52 480 Gene3D G3DSA:3.10.20.90 10 98 1.9E-21 T 12-10-2018 JDM601_0298 54da0c5d276111e2fbc2456cdf810b52 480 TIGRFAM TIGR03920 T7SS_EccD: type VII secretion integral membrane protein EccD 17 478 2.6E-107 T 12-10-2018 IPR006707 Type VII secretion system membrane protein EccD JDM601_0298 54da0c5d276111e2fbc2456cdf810b52 480 PIRSF PIRSF017804 7 480 8.4E-95 T 12-10-2018 IPR006707 Type VII secretion system membrane protein EccD JDM601_0271 b4b6dc9fbe90a71e791158bfc244fc6a 138 Hamap MF_00265 tRNA(fMet)-specific endonuclease VapC [vapC]. 4 129 11.531 T 12-10-2018 IPR022907 VapC family GO:0004540 JDM601_0271 b4b6dc9fbe90a71e791158bfc244fc6a 138 SUPERFAMILY SSF88723 5 120 4.12E-6 T 12-10-2018 IPR029060 PIN-like domain superfamily JDM601_0271 b4b6dc9fbe90a71e791158bfc244fc6a 138 Gene3D G3DSA:3.40.50.1010 2 136 1.5E-26 T 12-10-2018 JDM601_0814 a2fb3156e005203acdb1b07ad1db95bb 204 Pfam PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 168 204 3.8E-12 T 12-10-2018 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 JDM601_0814 a2fb3156e005203acdb1b07ad1db95bb 204 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 31 110 1.0E-17 T 12-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 JDM601_0814 a2fb3156e005203acdb1b07ad1db95bb 204 Gene3D G3DSA:2.30.110.10 4 204 8.9E-69 T 12-10-2018 IPR012349 FMN-binding split barrel GO:0048037 JDM601_0814 a2fb3156e005203acdb1b07ad1db95bb 204 PIRSF PIRSF000190 1 204 1.1E-60 T 12-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 JDM601_0814 a2fb3156e005203acdb1b07ad1db95bb 204 TIGRFAM TIGR00558 pdxH: pyridoxamine 5'-phosphate oxidase 24 193 4.0E-53 T 12-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 JDM601_0814 a2fb3156e005203acdb1b07ad1db95bb 204 ProSitePatterns PS01064 Pyridoxamine 5'-phosphate oxidase signature. 178 191 - T 12-10-2018 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 JDM601_0814 a2fb3156e005203acdb1b07ad1db95bb 204 SUPERFAMILY SSF50475 7 204 2.36E-57 T 12-10-2018 JDM601_1855 56670dc2e35db215ecee28452fe75941 602 TIGRFAM TIGR00337 PyrG: CTP synthase 14 548 9.7E-221 T 12-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 JDM601_1855 56670dc2e35db215ecee28452fe75941 602 Gene3D G3DSA:3.40.50.880 302 556 2.4E-95 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like JDM601_1855 56670dc2e35db215ecee28452fe75941 602 Pfam PF06418 CTP synthase N-terminus 14 282 1.6E-120 T 12-10-2018 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 JDM601_1855 56670dc2e35db215ecee28452fe75941 602 SUPERFAMILY SSF52540 14 282 9.44E-117 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_1855 56670dc2e35db215ecee28452fe75941 602 Pfam PF00117 Glutamine amidotransferase class-I 317 546 1.7E-41 T 12-10-2018 IPR017926 Glutamine amidotransferase JDM601_1855 56670dc2e35db215ecee28452fe75941 602 SUPERFAMILY SSF52317 305 553 9.17E-67 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like JDM601_1855 56670dc2e35db215ecee28452fe75941 602 Gene3D G3DSA:3.40.50.300 4 301 7.2E-134 T 12-10-2018 JDM601_1855 56670dc2e35db215ecee28452fe75941 602 Hamap MF_01227 CTP synthase [pyrG]. 13 553 47.959 T 12-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 JDM601_3352 86aedd1abbe7b329e019373d1d48eb51 348 SUPERFAMILY SSF51679 9 344 1.83E-50 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 JDM601_3352 86aedd1abbe7b329e019373d1d48eb51 348 Gene3D G3DSA:3.20.20.30 16 345 9.9E-55 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 JDM601_3352 86aedd1abbe7b329e019373d1d48eb51 348 Pfam PF00296 Luciferase-like monooxygenase 20 323 1.1E-38 T 12-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 JDM601_3352 86aedd1abbe7b329e019373d1d48eb51 348 TIGRFAM TIGR03857 F420_MSMEG_2249: probable F420-dependent oxidoreductase, MSMEG_2249 family 9 336 6.2E-147 T 12-10-2018 IPR022378 F420-dependent oxidoreductase-predicted, MSMEG2249 JDM601_0793 99aa01ac0f6cfe743dfde332156f8ee3 160 SUPERFAMILY SSF53218 5 153 6.41E-38 T 12-10-2018 IPR036425 MoaB/Mog-like domain superfamily JDM601_0793 99aa01ac0f6cfe743dfde332156f8ee3 160 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 6 142 7.2E-30 T 12-10-2018 IPR001453 MoaB/Mog domain JDM601_0793 99aa01ac0f6cfe743dfde332156f8ee3 160 SMART SM00852 7 149 1.0E-14 T 12-10-2018 IPR001453 MoaB/Mog domain JDM601_0793 99aa01ac0f6cfe743dfde332156f8ee3 160 Gene3D G3DSA:3.40.980.10 1 160 3.5E-51 T 12-10-2018 IPR036425 MoaB/Mog-like domain superfamily JDM601_0793 99aa01ac0f6cfe743dfde332156f8ee3 160 Pfam PF00994 Probable molybdopterin binding domain 8 147 5.6E-26 T 12-10-2018 IPR001453 MoaB/Mog domain JDM601_3419 9e7ee818b480a140a1a9c40d796c0365 510 Gene3D G3DSA:3.40.50.410 321 509 1.0E-12 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily JDM601_3419 9e7ee818b480a140a1a9c40d796c0365 510 SUPERFAMILY SSF53300 324 506 8.22E-16 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily JDM601_3419 9e7ee818b480a140a1a9c40d796c0365 510 SMART SM00327 324 508 1.7E-5 T 12-10-2018 IPR002035 von Willebrand factor, type A JDM601_2708 385c45845de286d5236d971cec429608 465 Gene3D G3DSA:3.90.380.10 6 423 1.2E-138 T 12-10-2018 JDM601_2708 385c45845de286d5236d971cec429608 465 ProSitePatterns PS00570 Bacterial ring hydroxylating dioxygenases alpha-subunit signature. 67 90 - T 12-10-2018 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site GO:0005506|GO:0051537|GO:0055114 JDM601_2708 385c45845de286d5236d971cec429608 465 SUPERFAMILY SSF55961 144 427 5.89E-52 T 12-10-2018 JDM601_2708 385c45845de286d5236d971cec429608 465 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 148 426 4.6E-18 T 12-10-2018 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0044237|GO:0051537|GO:0055114 JDM601_2708 385c45845de286d5236d971cec429608 465 SUPERFAMILY SSF50022 2 142 2.1E-45 T 12-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 JDM601_2708 385c45845de286d5236d971cec429608 465 Pfam PF00355 Rieske [2Fe-2S] domain 25 108 8.1E-20 T 12-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 JDM601_2708 385c45845de286d5236d971cec429608 465 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 39 54 3.6E-41 T 12-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 JDM601_2708 385c45845de286d5236d971cec429608 465 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 60 80 3.6E-41 T 12-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 JDM601_2708 385c45845de286d5236d971cec429608 465 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 127 153 3.6E-41 T 12-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 JDM601_2708 385c45845de286d5236d971cec429608 465 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 81 101 3.6E-41 T 12-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 JDM601_2708 385c45845de286d5236d971cec429608 465 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 9 34 3.6E-41 T 12-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 JDM601_2708 385c45845de286d5236d971cec429608 465 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 167 189 3.6E-41 T 12-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 JDM601_2708 385c45845de286d5236d971cec429608 465 Gene3D G3DSA:2.102.10.10 24 151 1.2E-138 T 12-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 JDM601_0570 0ff68a8d7f4b133acb6b662fcac4f58c 388 Gene3D G3DSA:3.30.9.50 38 265 2.2E-66 T 12-10-2018 JDM601_0570 0ff68a8d7f4b133acb6b662fcac4f58c 388 Pfam PF01494 FAD binding domain 2 333 1.2E-12 T 12-10-2018 IPR002938 FAD-binding domain GO:0071949 JDM601_0570 0ff68a8d7f4b133acb6b662fcac4f58c 388 Gene3D G3DSA:3.50.50.60 5 337 2.2E-66 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_0570 0ff68a8d7f4b133acb6b662fcac4f58c 388 SUPERFAMILY SSF51905 1 369 3.41E-53 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_0570 0ff68a8d7f4b133acb6b662fcac4f58c 388 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 290 306 8.6E-14 T 12-10-2018 JDM601_0570 0ff68a8d7f4b133acb6b662fcac4f58c 388 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 146 161 8.6E-14 T 12-10-2018 JDM601_0570 0ff68a8d7f4b133acb6b662fcac4f58c 388 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 2 24 8.6E-14 T 12-10-2018 JDM601_0570 0ff68a8d7f4b133acb6b662fcac4f58c 388 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 275 290 8.6E-14 T 12-10-2018 JDM601_1457 b649dc69713e8b0d54a588c296fd2bd3 437 Pfam PF03435 Saccharopine dehydrogenase NADP binding domain 29 153 5.1E-15 T 12-10-2018 IPR005097 Saccharopine dehydrogenase, NADP binding domain GO:0016491|GO:0055114 JDM601_1457 b649dc69713e8b0d54a588c296fd2bd3 437 Gene3D G3DSA:3.40.50.720 28 179 1.0E-36 T 12-10-2018 JDM601_1457 b649dc69713e8b0d54a588c296fd2bd3 437 SUPERFAMILY SSF51735 28 188 4.95E-18 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_0402 f60b274e3695b888b92490a6a33dc065 324 Gene3D G3DSA:3.40.630.30 98 320 7.9E-12 T 12-10-2018 JDM601_0402 f60b274e3695b888b92490a6a33dc065 324 SUPERFAMILY SSF55729 60 269 2.93E-7 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase JDM601_1936 9d908487755e7ff855406ba4c1901053 352 SUPERFAMILY SSF53254 40 141 6.48E-12 T 12-10-2018 IPR029033 Histidine phosphatase superfamily JDM601_1936 9d908487755e7ff855406ba4c1901053 352 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 43 136 1.3E-7 T 12-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 JDM601_1936 9d908487755e7ff855406ba4c1901053 352 Gene3D G3DSA:3.40.50.1240 41 162 2.5E-10 T 12-10-2018 IPR029033 Histidine phosphatase superfamily JDM601_2497 631c0dad1d9d912701413a3416c33592 169 Gene3D G3DSA:3.30.240.20 89 161 3.9E-15 T 12-10-2018 IPR023090 UPF0702, alpha/beta domain superfamily JDM601_2497 631c0dad1d9d912701413a3416c33592 169 Pfam PF04239 Protein of unknown function (DUF421) 99 163 4.3E-9 T 12-10-2018 IPR007353 Protein of unknown function DUF421 JDM601_0460 09648b8594f4d712bc82d6e3bdfc0a2f 237 Gene3D G3DSA:1.10.357.10 12 210 3.2E-27 T 12-10-2018 JDM601_0460 09648b8594f4d712bc82d6e3bdfc0a2f 237 SUPERFAMILY SSF48498 97 207 7.47E-22 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily JDM601_0460 09648b8594f4d712bc82d6e3bdfc0a2f 237 Pfam PF00440 Bacterial regulatory proteins, tetR family 30 74 1.1E-9 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_0460 09648b8594f4d712bc82d6e3bdfc0a2f 237 SUPERFAMILY SSF46689 16 84 1.23E-13 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JDM601_0483 2fb3730c0f4ebd18c8eb760c40551780 523 ProDom PD008243 RV1792C/MT1741/MB1728C RV1945/MT1995 MB1980 MB0098C RV3466/MT3572 VERY RV1128C/MT1160 RV1148C/MT1183 MB1159C RV0095C 6 78 3.0E-4 T 12-10-2018 JDM601_0483 2fb3730c0f4ebd18c8eb760c40551780 523 Pfam PF02720 Domain of unknown function (DUF222) 29 378 2.2E-74 T 12-10-2018 IPR003870 Domain of unknown function DUF222 JDM601_3776 30245ef88aa9ba63cce4618ef06b9a7e 326 Gene3D G3DSA:1.20.140.10 155 287 5.2E-24 T 12-10-2018 JDM601_3776 30245ef88aa9ba63cce4618ef06b9a7e 326 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 166 279 1.3E-14 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 JDM601_3776 30245ef88aa9ba63cce4618ef06b9a7e 326 SUPERFAMILY SSF47203 160 283 1.55E-25 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 JDM601_0716 2e7ddb4b8c2ab9c06280814f3c5f2eea 97 Pfam PF01850 PIN domain 4 84 2.0E-6 T 12-10-2018 IPR002716 PIN domain JDM601_0716 2e7ddb4b8c2ab9c06280814f3c5f2eea 97 Gene3D G3DSA:3.40.50.1010 1 90 7.9E-14 T 12-10-2018 JDM601_0716 2e7ddb4b8c2ab9c06280814f3c5f2eea 97 SUPERFAMILY SSF88723 3 91 3.92E-12 T 12-10-2018 IPR029060 PIN-like domain superfamily JDM601_2130 0c699e3ba307f8b24503f52bc45e1f2f 523 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 16 274 2.9E-59 T 12-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 JDM601_2130 0c699e3ba307f8b24503f52bc45e1f2f 523 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 7 276 2.8E-39 T 12-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 JDM601_2130 0c699e3ba307f8b24503f52bc45e1f2f 523 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 144 156 - T 12-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 JDM601_2130 0c699e3ba307f8b24503f52bc45e1f2f 523 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 11 280 15.274 T 12-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 JDM601_1413 ce2640426bc2d4273ffbd3b5fea58039 236 Gene3D G3DSA:3.40.50.300 36 235 6.7E-58 T 12-10-2018 JDM601_1413 ce2640426bc2d4273ffbd3b5fea58039 236 SUPERFAMILY SSF52540 93 161 3.8E-9 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_1413 ce2640426bc2d4273ffbd3b5fea58039 236 Pfam PF13469 Sulfotransferase family 120 225 5.5E-11 T 12-10-2018 JDM601_1528 d28f46172cc354b47bba67d114b93694 513 Pfam PF00501 AMP-binding enzyme 6 415 2.4E-80 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 JDM601_1528 d28f46172cc354b47bba67d114b93694 513 SUPERFAMILY SSF56801 3 509 4.45E-127 T 12-10-2018 JDM601_1528 d28f46172cc354b47bba67d114b93694 513 Gene3D G3DSA:3.30.300.310 412 512 4.0E-23 T 12-10-2018 JDM601_1528 d28f46172cc354b47bba67d114b93694 513 Pfam PF13193 AMP-binding enzyme C-terminal domain 426 500 3.8E-10 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain JDM601_1528 d28f46172cc354b47bba67d114b93694 513 Gene3D G3DSA:3.40.50.12780 1 411 1.6E-139 T 12-10-2018 JDM601_3239 c3fbe2c3ccc1b81de89e38d984a8875e 351 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 5 312 1.3E-83 T 12-10-2018 IPR017861 Kae1/TsaD family JDM601_3239 c3fbe2c3ccc1b81de89e38d984a8875e 351 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 133 145 3.3E-50 T 12-10-2018 IPR017861 Kae1/TsaD family JDM601_3239 c3fbe2c3ccc1b81de89e38d984a8875e 351 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 5 18 3.3E-50 T 12-10-2018 IPR017861 Kae1/TsaD family JDM601_3239 c3fbe2c3ccc1b81de89e38d984a8875e 351 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 100 119 3.3E-50 T 12-10-2018 IPR017861 Kae1/TsaD family JDM601_3239 c3fbe2c3ccc1b81de89e38d984a8875e 351 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 157 178 3.3E-50 T 12-10-2018 IPR017861 Kae1/TsaD family JDM601_3239 c3fbe2c3ccc1b81de89e38d984a8875e 351 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 269 278 3.3E-50 T 12-10-2018 IPR017861 Kae1/TsaD family JDM601_3239 c3fbe2c3ccc1b81de89e38d984a8875e 351 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 79 99 3.3E-50 T 12-10-2018 IPR017861 Kae1/TsaD family JDM601_3239 c3fbe2c3ccc1b81de89e38d984a8875e 351 Pfam PF00814 Glycoprotease family 29 312 2.4E-86 T 12-10-2018 IPR000905 Gcp-like domain JDM601_3239 c3fbe2c3ccc1b81de89e38d984a8875e 351 ProSitePatterns PS01016 Glycoprotease family signature. 99 119 - T 12-10-2018 IPR017860 Peptidase M22, conserved site Reactome: R-HSA-6782315 JDM601_3239 c3fbe2c3ccc1b81de89e38d984a8875e 351 SUPERFAMILY SSF53067 4 314 7.34E-30 T 12-10-2018 JDM601_3239 c3fbe2c3ccc1b81de89e38d984a8875e 351 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 4 318 4.2E-110 T 12-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 JDM601_3239 c3fbe2c3ccc1b81de89e38d984a8875e 351 Gene3D G3DSA:3.30.420.40 131 299 1.1E-101 T 12-10-2018 JDM601_3239 c3fbe2c3ccc1b81de89e38d984a8875e 351 Gene3D G3DSA:3.30.420.40 4 320 1.1E-101 T 12-10-2018 JDM601_3239 c3fbe2c3ccc1b81de89e38d984a8875e 351 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 2 338 59.292 T 12-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 JDM601_1512 b3e401b408ed220c5a265dca0c98febd 339 Gene3D G3DSA:3.40.190.10 44 301 1.4E-86 T 12-10-2018 JDM601_1512 b3e401b408ed220c5a265dca0c98febd 339 Gene3D G3DSA:3.40.190.10 127 326 1.4E-86 T 12-10-2018 JDM601_1512 b3e401b408ed220c5a265dca0c98febd 339 Pfam PF13531 Bacterial extracellular solute-binding protein 42 286 1.0E-30 T 12-10-2018 JDM601_1512 b3e401b408ed220c5a265dca0c98febd 339 SUPERFAMILY SSF53850 38 334 2.3E-52 T 12-10-2018 JDM601_0891 4ba2260c7470db95e916b43d3ecc3d7a 231 Pfam PF00106 short chain dehydrogenase 1 180 5.2E-35 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0891 4ba2260c7470db95e916b43d3ecc3d7a 231 SUPERFAMILY SSF51735 1 229 3.61E-44 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_0891 4ba2260c7470db95e916b43d3ecc3d7a 231 Gene3D G3DSA:3.40.50.720 1 231 7.4E-45 T 12-10-2018 JDM601_0891 4ba2260c7470db95e916b43d3ecc3d7a 231 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 116 124 2.6E-7 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0891 4ba2260c7470db95e916b43d3ecc3d7a 231 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 63 74 2.6E-7 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0891 4ba2260c7470db95e916b43d3ecc3d7a 231 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 137 156 2.6E-7 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0891 4ba2260c7470db95e916b43d3ecc3d7a 231 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 124 152 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 JDM601_0891 4ba2260c7470db95e916b43d3ecc3d7a 231 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 63 74 4.5E-13 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0891 4ba2260c7470db95e916b43d3ecc3d7a 231 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 137 156 4.5E-13 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0891 4ba2260c7470db95e916b43d3ecc3d7a 231 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 175 4.5E-13 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0891 4ba2260c7470db95e916b43d3ecc3d7a 231 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 110 126 4.5E-13 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_4121 fc362f8d25622404af048279d3031d8c 299 Pfam PF00756 Putative esterase 45 293 8.9E-51 T 12-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 JDM601_4121 fc362f8d25622404af048279d3031d8c 299 Gene3D G3DSA:3.40.50.1820 29 299 5.3E-71 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_4121 fc362f8d25622404af048279d3031d8c 299 SUPERFAMILY SSF53474 36 234 3.12E-25 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_2463 cddbb3ec219332d0cbcf60c7e24635f9 150 Pfam PF07080 Protein of unknown function (DUF1348) 6 134 3.6E-62 T 12-10-2018 IPR009783 Protein of unknown function DUF1348 JDM601_2463 cddbb3ec219332d0cbcf60c7e24635f9 150 SUPERFAMILY SSF54427 4 143 2.93E-66 T 12-10-2018 IPR032710 NTF2-like domain superfamily JDM601_2463 cddbb3ec219332d0cbcf60c7e24635f9 150 Gene3D G3DSA:3.10.450.50 9 148 3.6E-62 T 12-10-2018 JDM601_0366 112b531e942dc01d7e52c877073508bc 535 TIGRFAM TIGR00831 a_cpa1: Na+/H+ antiporter 12 532 4.5E-99 T 12-10-2018 IPR004705 Cation/H+ exchanger, CPA1 family, bacteria GO:0006812|GO:0015299|GO:0016021 JDM601_0366 112b531e942dc01d7e52c877073508bc 535 Pfam PF00999 Sodium/hydrogen exchanger family 14 405 9.3E-53 T 12-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 JDM601_1281 df7ef21f9162380343382bbe11dbb2fb 242 Gene3D G3DSA:3.30.540.10 2 126 2.0E-24 T 12-10-2018 JDM601_1281 df7ef21f9162380343382bbe11dbb2fb 242 PRINTS PR00377 Inositol monophosphatase superfamily signature 76 92 3.8E-6 T 12-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 JDM601_1281 df7ef21f9162380343382bbe11dbb2fb 242 PRINTS PR00377 Inositol monophosphatase superfamily signature 187 211 3.8E-6 T 12-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 JDM601_1281 df7ef21f9162380343382bbe11dbb2fb 242 PRINTS PR00377 Inositol monophosphatase superfamily signature 155 176 3.8E-6 T 12-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 JDM601_1281 df7ef21f9162380343382bbe11dbb2fb 242 PRINTS PR00377 Inositol monophosphatase superfamily signature 54 70 3.8E-6 T 12-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 JDM601_1281 df7ef21f9162380343382bbe11dbb2fb 242 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 76 88 - T 12-10-2018 IPR020583 Inositol monophosphatase, metal-binding site JDM601_1281 df7ef21f9162380343382bbe11dbb2fb 242 Pfam PF00459 Inositol monophosphatase family 33 225 6.0E-31 T 12-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 JDM601_1281 df7ef21f9162380343382bbe11dbb2fb 242 SUPERFAMILY SSF56655 2 241 2.75E-54 T 12-10-2018 JDM601_1281 df7ef21f9162380343382bbe11dbb2fb 242 Gene3D G3DSA:3.40.190.80 132 232 1.9E-21 T 12-10-2018 JDM601_1323 1530f9e1fda3b8fa1fd63e67fbdb3c0e 223 Gene3D G3DSA:3.40.1350.10 98 209 1.2E-25 T 12-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 JDM601_1323 1530f9e1fda3b8fa1fd63e67fbdb3c0e 223 Gene3D G3DSA:2.70.180.20 1 92 2.4E-19 T 12-10-2018 JDM601_1323 1530f9e1fda3b8fa1fd63e67fbdb3c0e 223 Hamap MF_00722 Endonuclease NucS [nucS]. 1 215 31.646 T 12-10-2018 IPR002793 Endonuclease NucS GO:0004519 JDM601_1323 1530f9e1fda3b8fa1fd63e67fbdb3c0e 223 Pfam PF01939 Endonuclease NucS 2 223 9.3E-96 T 12-10-2018 IPR002793 Endonuclease NucS GO:0004519 JDM601_4182 6c92c02f6c6d233a7f10220cf4ceed6d 330 Pfam PF00756 Putative esterase 58 319 1.6E-70 T 12-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 JDM601_4182 6c92c02f6c6d233a7f10220cf4ceed6d 330 Gene3D G3DSA:3.40.50.1820 43 324 3.4E-89 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_4182 6c92c02f6c6d233a7f10220cf4ceed6d 330 SUPERFAMILY SSF53474 44 324 1.11E-39 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_2127 b23e5497718dcb2e68327fcd861c2b25 292 Gene3D G3DSA:3.10.129.90 6 285 5.4E-80 T 12-10-2018 JDM601_2127 b23e5497718dcb2e68327fcd861c2b25 292 SUPERFAMILY SSF54637 9 116 1.55E-29 T 12-10-2018 IPR029069 HotDog domain superfamily JDM601_2127 b23e5497718dcb2e68327fcd861c2b25 292 SUPERFAMILY SSF54637 120 285 1.21E-43 T 12-10-2018 IPR029069 HotDog domain superfamily JDM601_2127 b23e5497718dcb2e68327fcd861c2b25 292 Pfam PF13622 Thioesterase-like superfamily 31 283 5.3E-46 T 12-10-2018 JDM601_2231 2d33f5c4a8434a744f6b26f1019a081e 269 SUPERFAMILY SSF51735 5 265 4.63E-46 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_2231 2d33f5c4a8434a744f6b26f1019a081e 269 PIRSF PIRSF000094 2 269 3.1E-101 T 12-10-2018 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 JDM601_2231 2d33f5c4a8434a744f6b26f1019a081e 269 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 265 2.9E-55 T 12-10-2018 JDM601_2231 2d33f5c4a8434a744f6b26f1019a081e 269 Gene3D G3DSA:3.40.50.720 2 268 1.6E-54 T 12-10-2018 JDM601_1372 897055df50cc0f1e897492a0334f9ee4 168 Pfam PF08808 RES domain 1 134 6.5E-19 T 12-10-2018 IPR014914 RES domain JDM601_1372 897055df50cc0f1e897492a0334f9ee4 168 SMART SM00953 2 140 0.0074 T 12-10-2018 IPR014914 RES domain JDM601_0864 f81f781d3b3d216abbd64f671161bee3 125 Gene3D G3DSA:3.10.180.10 1 119 2.8E-9 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase JDM601_0864 f81f781d3b3d216abbd64f671161bee3 125 SUPERFAMILY SSF54593 2 116 7.01E-10 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase JDM601_0879 c29f3bd683d05bb4b77b614d8e4db833 134 Gene3D G3DSA:2.60.40.2880 45 134 1.5E-31 T 12-10-2018 IPR038468 Transport accessory protein MmpS, soluble domain superfamily JDM601_0879 c29f3bd683d05bb4b77b614d8e4db833 134 Pfam PF05423 Mycobacterium membrane protein 2 133 2.6E-49 T 12-10-2018 IPR008693 Transport accessory protein MmpS JDM601_1764 14608f4b72b024301c9ae66e685eb192 175 SUPERFAMILY SSF88659 105 169 7.2E-14 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like JDM601_1764 14608f4b72b024301c9ae66e685eb192 175 Gene3D G3DSA:1.10.1740.10 8 88 7.4E-16 T 12-10-2018 JDM601_1764 14608f4b72b024301c9ae66e685eb192 175 Gene3D G3DSA:1.10.10.10 103 175 1.0E-31 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JDM601_1764 14608f4b72b024301c9ae66e685eb192 175 Pfam PF04542 Sigma-70 region 2 21 85 6.0E-17 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 JDM601_1764 14608f4b72b024301c9ae66e685eb192 175 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 21 168 3.1E-24 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 JDM601_1764 14608f4b72b024301c9ae66e685eb192 175 SUPERFAMILY SSF88946 18 97 5.89E-19 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 JDM601_1764 14608f4b72b024301c9ae66e685eb192 175 Pfam PF04545 Sigma-70, region 4 120 166 3.4E-13 T 12-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 JDM601_0940 f5374741b203d6cdf789e158aa2c82d1 198 PIRSF PIRSF006806 5 192 1.3E-46 T 12-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase JDM601_0940 f5374741b203d6cdf789e158aa2c82d1 198 SUPERFAMILY SSF100950 9 191 2.79E-40 T 12-10-2018 IPR037171 NagB/RpiA transferase-like JDM601_0940 f5374741b203d6cdf789e158aa2c82d1 198 Gene3D G3DSA:3.40.50.10420 8 195 7.1E-39 T 12-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily JDM601_0940 f5374741b203d6cdf789e158aa2c82d1 198 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 10 190 6.2E-38 T 12-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase JDM601_0940 f5374741b203d6cdf789e158aa2c82d1 198 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 10 190 7.6E-43 T 12-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase JDM601_4031 a074523e3db70c6439cf1b0b6760827c 468 Pfam PF04228 Putative neutral zinc metallopeptidase 64 251 4.4E-6 T 12-10-2018 IPR007343 Uncharacterised protein family, zinc metallopeptidase putative JDM601_4031 a074523e3db70c6439cf1b0b6760827c 468 SUPERFAMILY SSF55486 30 194 2.01E-7 T 12-10-2018 JDM601_0254 eb6bb06c4ccecb18d8d1934e7968ced5 338 Gene3D G3DSA:3.90.1200.10 107 338 5.8E-62 T 12-10-2018 JDM601_0254 eb6bb06c4ccecb18d8d1934e7968ced5 338 Gene3D G3DSA:3.30.200.20 5 106 2.7E-22 T 12-10-2018 JDM601_0254 eb6bb06c4ccecb18d8d1934e7968ced5 338 SUPERFAMILY SSF56112 9 311 2.92E-47 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily JDM601_0254 eb6bb06c4ccecb18d8d1934e7968ced5 338 Pfam PF01636 Phosphotransferase enzyme family 28 253 2.4E-39 T 12-10-2018 IPR002575 Aminoglycoside phosphotransferase JDM601_3341 bd132778695df32af03fd440b1732d49 547 ProSitePatterns PS00941 Carboxylesterases type-B signature 2. 120 130 - T 12-10-2018 IPR019819 Carboxylesterase type B, conserved site JDM601_3341 bd132778695df32af03fd440b1732d49 547 Pfam PF00135 Carboxylesterase family 50 542 5.4E-113 T 12-10-2018 IPR002018 Carboxylesterase, type B JDM601_3341 bd132778695df32af03fd440b1732d49 547 SUPERFAMILY SSF53474 51 543 2.48E-114 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_3341 bd132778695df32af03fd440b1732d49 547 Gene3D G3DSA:3.40.50.1820 46 547 3.9E-141 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_3341 bd132778695df32af03fd440b1732d49 547 ProSitePatterns PS00122 Carboxylesterases type-B serine active site. 213 228 - T 12-10-2018 IPR019826 Carboxylesterase type B, active site JDM601_2631 54a525988d5f15bfafb4a2696619f75d 174 Gene3D G3DSA:3.30.1320.10 1 105 3.0E-28 T 12-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JDM601_2631 54a525988d5f15bfafb4a2696619f75d 174 ProSitePatterns PS00732 Ribosomal protein S16 signature. 3 12 - T 12-10-2018 IPR020592 Ribosomal protein S16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 JDM601_2631 54a525988d5f15bfafb4a2696619f75d 174 Pfam PF00886 Ribosomal protein S16 9 67 4.8E-22 T 12-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JDM601_2631 54a525988d5f15bfafb4a2696619f75d 174 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 2 77 22.471 T 12-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JDM601_2631 54a525988d5f15bfafb4a2696619f75d 174 SUPERFAMILY SSF54565 2 96 1.7E-31 T 12-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JDM601_2631 54a525988d5f15bfafb4a2696619f75d 174 TIGRFAM TIGR00002 S16: ribosomal protein bS16 3 79 9.5E-30 T 12-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JDM601_3689 515b26f4abeeb4257b0671c2fb347df8 322 SUPERFAMILY SSF50249 185 302 1.27E-21 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold JDM601_3689 515b26f4abeeb4257b0671c2fb347df8 322 Pfam PF13452 N-terminal half of MaoC dehydratase 21 156 3.4E-22 T 12-10-2018 IPR039569 N-terminal of MaoC-like dehydratase Reactome: R-HSA-193368|Reactome: R-HSA-2046106|Reactome: R-HSA-389887|Reactome: R-HSA-390247|Reactome: R-HSA-9033241|Reactome: R-HSA-9033500 JDM601_3689 515b26f4abeeb4257b0671c2fb347df8 322 Pfam PF01796 DUF35 OB-fold domain, acyl-CoA-associated 236 295 1.3E-19 T 12-10-2018 IPR002878 Domain of unknown function DUF35, OB-fold, C-terminal JDM601_3689 515b26f4abeeb4257b0671c2fb347df8 322 SUPERFAMILY SSF54637 15 173 3.2E-23 T 12-10-2018 IPR029069 HotDog domain superfamily JDM601_3689 515b26f4abeeb4257b0671c2fb347df8 322 Gene3D G3DSA:3.10.129.10 1 176 8.8E-66 T 12-10-2018 JDM601_2634 a5164020659c15eb974082114135e22d 355 Gene3D G3DSA:3.20.20.140 47 317 6.6E-49 T 12-10-2018 JDM601_2634 a5164020659c15eb974082114135e22d 355 Pfam PF01979 Amidohydrolase family 163 353 2.7E-12 T 12-10-2018 IPR006680 Amidohydrolase-related GO:0016787 JDM601_2634 a5164020659c15eb974082114135e22d 355 SUPERFAMILY SSF51556 45 317 9.08E-59 T 12-10-2018 IPR032466 Metal-dependent hydrolase JDM601_0424 0443bf57ff3d2208e75e11fab083a004 493 Pfam PF03703 Bacterial PH domain 410 473 1.7E-5 T 12-10-2018 IPR005182 Domain of unknown function DUF304 JDM601_0424 0443bf57ff3d2208e75e11fab083a004 493 Pfam PF03703 Bacterial PH domain 61 145 3.5E-11 T 12-10-2018 IPR005182 Domain of unknown function DUF304 JDM601_0424 0443bf57ff3d2208e75e11fab083a004 493 PIRSF PIRSF026631 6 493 4.6E-75 T 12-10-2018 IPR014529 Uncharacterised conserved protein UCP026631 JDM601_3100 04d5a24a897266c09456608d1486dc76 593 Pfam PF00723 Glycosyl hydrolases family 15 244 521 1.5E-23 T 12-10-2018 IPR011613 GH15-like domain Reactome: R-HSA-70221 JDM601_3100 04d5a24a897266c09456608d1486dc76 593 SUPERFAMILY SSF48208 218 574 8.16E-60 T 12-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 JDM601_3100 04d5a24a897266c09456608d1486dc76 593 Gene3D G3DSA:1.50.10.10 227 584 9.6E-52 T 12-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 JDM601_4036 e660dab9864e03280d231425b0c978c1 313 Pfam PF02153 Prephenate dehydrogenase 38 254 7.0E-42 T 12-10-2018 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 JDM601_4036 e660dab9864e03280d231425b0c978c1 313 Gene3D G3DSA:1.10.3660.10 169 273 1.5E-92 T 12-10-2018 JDM601_4036 e660dab9864e03280d231425b0c978c1 313 SUPERFAMILY SSF51735 1 162 1.22E-31 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_4036 e660dab9864e03280d231425b0c978c1 313 Gene3D G3DSA:3.40.50.720 1 168 1.5E-92 T 12-10-2018 JDM601_4036 e660dab9864e03280d231425b0c978c1 313 SUPERFAMILY SSF48179 169 273 2.95E-21 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 JDM601_1183 efa32613d2bce7515aff85434ad5d18f 315 Pfam PF00535 Glycosyl transferase family 2 40 155 1.5E-12 T 12-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 JDM601_1183 efa32613d2bce7515aff85434ad5d18f 315 SUPERFAMILY SSF53448 39 274 1.77E-53 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases JDM601_1183 efa32613d2bce7515aff85434ad5d18f 315 Gene3D G3DSA:3.90.550.10 3 315 2.4E-132 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases JDM601_3304 863e8d9587172cf9feacf0fabef62efb 410 Gene3D G3DSA:3.40.710.30 13 406 1.1E-110 T 12-10-2018 JDM601_3304 863e8d9587172cf9feacf0fabef62efb 410 Pfam PF00144 Beta-lactamase 25 389 2.7E-53 T 12-10-2018 IPR001466 Beta-lactamase-related JDM601_3304 863e8d9587172cf9feacf0fabef62efb 410 SUPERFAMILY SSF56601 17 399 6.76E-57 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like JDM601_2244 1aa7c3a5303433c9267ac1174402f814 119 SUPERFAMILY SSF52833 2 98 1.08E-32 T 12-10-2018 IPR036249 Thioredoxin-like superfamily JDM601_2244 1aa7c3a5303433c9267ac1174402f814 119 PRINTS PR00421 Thioredoxin family signature 63 74 1.2E-8 T 12-10-2018 JDM601_2244 1aa7c3a5303433c9267ac1174402f814 119 PRINTS PR00421 Thioredoxin family signature 24 33 1.2E-8 T 12-10-2018 JDM601_2244 1aa7c3a5303433c9267ac1174402f814 119 PRINTS PR00421 Thioredoxin family signature 16 24 1.2E-8 T 12-10-2018 JDM601_2244 1aa7c3a5303433c9267ac1174402f814 119 TIGRFAM TIGR01068 thioredoxin: thioredoxin 2 97 6.9E-34 T 12-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 JDM601_2244 1aa7c3a5303433c9267ac1174402f814 119 PIRSF PIRSF000077 1 99 4.2E-29 T 12-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 JDM601_2244 1aa7c3a5303433c9267ac1174402f814 119 Pfam PF00085 Thioredoxin 2 96 7.6E-28 T 12-10-2018 IPR013766 Thioredoxin domain GO:0045454 JDM601_2244 1aa7c3a5303433c9267ac1174402f814 119 Gene3D G3DSA:3.40.30.10 1 108 3.5E-31 T 12-10-2018 JDM601_2244 1aa7c3a5303433c9267ac1174402f814 119 ProSitePatterns PS00194 Thioredoxin family active site. 17 35 - T 12-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 JDM601_2792 edd8b24b82186b472d61628c00b21e89 218 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 27 40 1.3E-6 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_2792 edd8b24b82186b472d61628c00b21e89 218 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 48 71 1.3E-6 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_2792 edd8b24b82186b472d61628c00b21e89 218 Gene3D G3DSA:1.10.10.60 20 65 1.8E-18 T 12-10-2018 JDM601_2792 edd8b24b82186b472d61628c00b21e89 218 SUPERFAMILY SSF48498 94 212 2.67E-23 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily JDM601_2792 edd8b24b82186b472d61628c00b21e89 218 Pfam PF00440 Bacterial regulatory proteins, tetR family 27 72 8.2E-11 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_2792 edd8b24b82186b472d61628c00b21e89 218 Gene3D G3DSA:1.10.357.10 66 216 3.5E-18 T 12-10-2018 JDM601_2792 edd8b24b82186b472d61628c00b21e89 218 SUPERFAMILY SSF46689 19 83 4.54E-14 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JDM601_4290 e56295727fe2c78637713a876581d56a 286 Pfam PF04240 Carotenoid biosynthesis protein 47 221 1.4E-24 T 12-10-2018 IPR007354 Carotene biosynthesis associated membrane protein JDM601_1334 d685bfb2595d5e2c0135ca03a0709d69 80 Gene3D G3DSA:1.10.1220.10 10 72 6.3E-6 T 12-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 JDM601_1334 d685bfb2595d5e2c0135ca03a0709d69 80 SUPERFAMILY SSF47598 5 59 2.52E-7 T 12-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 JDM601_0106 eb7fdcbd7862957152f21b819e27a283 288 SUPERFAMILY SSF63829 18 261 8.94E-50 T 12-10-2018 JDM601_0106 eb7fdcbd7862957152f21b819e27a283 288 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 241 259 2.6E-5 T 12-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) JDM601_0106 eb7fdcbd7862957152f21b819e27a283 288 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 139 161 2.6E-5 T 12-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) JDM601_0106 eb7fdcbd7862957152f21b819e27a283 288 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 199 216 2.6E-5 T 12-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) JDM601_0106 eb7fdcbd7862957152f21b819e27a283 288 Gene3D G3DSA:2.120.10.30 5 265 3.4E-47 T 12-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like JDM601_0106 eb7fdcbd7862957152f21b819e27a283 288 Pfam PF08450 SMP-30/Gluconolaconase/LRE-like region 28 259 1.5E-50 T 12-10-2018 IPR013658 SMP-30/Gluconolactonase/LRE-like region JDM601_1788 24a611d93d232f4d3b11adf1795506fa 206 ProSitePatterns PS01081 TetR-type HTH domain signature. 33 64 - T 12-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site JDM601_1788 24a611d93d232f4d3b11adf1795506fa 206 SUPERFAMILY SSF46689 7 82 6.67E-16 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JDM601_1788 24a611d93d232f4d3b11adf1795506fa 206 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 21 34 3.1E-5 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_1788 24a611d93d232f4d3b11adf1795506fa 206 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 42 65 3.1E-5 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_1788 24a611d93d232f4d3b11adf1795506fa 206 Gene3D G3DSA:1.10.357.10 63 203 6.4E-15 T 12-10-2018 JDM601_1788 24a611d93d232f4d3b11adf1795506fa 206 Pfam PF00440 Bacterial regulatory proteins, tetR family 21 66 1.6E-11 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_1788 24a611d93d232f4d3b11adf1795506fa 206 SUPERFAMILY SSF48498 95 199 1.22E-7 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily JDM601_1788 24a611d93d232f4d3b11adf1795506fa 206 Gene3D G3DSA:1.10.10.60 9 62 1.3E-12 T 12-10-2018 JDM601_3556 f21d2e69fab315bb74c03e85231fdd8a 404 SUPERFAMILY SSF55961 155 394 3.06E-37 T 12-10-2018 JDM601_3556 f21d2e69fab315bb74c03e85231fdd8a 404 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 171 391 3.1E-51 T 12-10-2018 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0044237|GO:0051537|GO:0055114 JDM601_3556 f21d2e69fab315bb74c03e85231fdd8a 404 Gene3D G3DSA:3.90.380.10 29 42 3.1E-13 T 12-10-2018 JDM601_3556 f21d2e69fab315bb74c03e85231fdd8a 404 Gene3D G3DSA:3.90.380.10 156 362 2.3E-15 T 12-10-2018 JDM601_3556 f21d2e69fab315bb74c03e85231fdd8a 404 SUPERFAMILY SSF50022 17 149 1.09E-20 T 12-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 JDM601_3556 f21d2e69fab315bb74c03e85231fdd8a 404 Gene3D G3DSA:2.102.10.10 122 155 2.3E-15 T 12-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 JDM601_3556 f21d2e69fab315bb74c03e85231fdd8a 404 Gene3D G3DSA:2.102.10.10 43 99 3.1E-13 T 12-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 JDM601_0893 99a23aa43d78ce52b8f30c5c28d9b518 102 Gene3D G3DSA:1.20.59.10 14 102 1.6E-29 T 12-10-2018 IPR036979 Chorismate mutase domain superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 JDM601_0893 99a23aa43d78ce52b8f30c5c28d9b518 102 SMART SM00830 30 92 1.5E-7 T 12-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 JDM601_0893 99a23aa43d78ce52b8f30c5c28d9b518 102 SUPERFAMILY SSF48600 20 85 2.29E-14 T 12-10-2018 IPR036263 Chorismate mutase type II superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 JDM601_0893 99a23aa43d78ce52b8f30c5c28d9b518 102 TIGRFAM TIGR01808 CM_M_hiGC-arch: chorismate mutase 26 98 7.1E-37 T 12-10-2018 IPR010958 Chorismate mutase, high GC Gram-positive bacteria/archaeal JDM601_0893 99a23aa43d78ce52b8f30c5c28d9b518 102 Pfam PF01817 Chorismate mutase type II 30 82 2.1E-10 T 12-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 JDM601_0929 fc2117d7f2d55e4ca0f536a42676a366 382 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 123 214 6.8E-24 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 JDM601_0929 fc2117d7f2d55e4ca0f536a42676a366 382 Gene3D G3DSA:1.20.140.10 234 379 2.8E-42 T 12-10-2018 JDM601_0929 fc2117d7f2d55e4ca0f536a42676a366 382 SUPERFAMILY SSF47203 228 378 7.89E-40 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 JDM601_0929 fc2117d7f2d55e4ca0f536a42676a366 382 Gene3D G3DSA:1.10.540.10 3 121 3.8E-34 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 JDM601_0929 fc2117d7f2d55e4ca0f536a42676a366 382 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 337 356 - T 12-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 JDM601_0929 fc2117d7f2d55e4ca0f536a42676a366 382 SUPERFAMILY SSF56645 3 236 8.38E-72 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 JDM601_0929 fc2117d7f2d55e4ca0f536a42676a366 382 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 229 377 2.2E-41 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 JDM601_0929 fc2117d7f2d55e4ca0f536a42676a366 382 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 7 119 1.1E-25 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 JDM601_0929 fc2117d7f2d55e4ca0f536a42676a366 382 Gene3D G3DSA:2.40.110.10 122 233 5.9E-39 T 12-10-2018 JDM601_2420 399fb30376a599276698aab4ae528fb1 130 Gene3D G3DSA:2.170.150.20 1 129 5.7E-56 T 12-10-2018 JDM601_2420 399fb30376a599276698aab4ae528fb1 130 SUPERFAMILY SSF51316 2 128 4.92E-53 T 12-10-2018 IPR011057 Mss4-like superfamily JDM601_2420 399fb30376a599276698aab4ae528fb1 130 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 4 128 4.5E-47 T 12-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 JDM601_2420 399fb30376a599276698aab4ae528fb1 130 Pfam PF01641 SelR domain 7 127 7.3E-51 T 12-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 JDM601_1282 b0792b423bfc4859bf2a227fb0b7dc0a 154 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 129 5.5E-38 T 12-10-2018 IPR000944 Transcription regulator Rrf2-type JDM601_1282 b0792b423bfc4859bf2a227fb0b7dc0a 154 SUPERFAMILY SSF46785 2 130 9.75E-28 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JDM601_1282 b0792b423bfc4859bf2a227fb0b7dc0a 154 Pfam PF02082 Transcriptional regulator 1 81 6.8E-25 T 12-10-2018 IPR000944 Transcription regulator Rrf2-type JDM601_1282 b0792b423bfc4859bf2a227fb0b7dc0a 154 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 47 65 - T 12-10-2018 IPR030489 Transcription regulator Rrf2-type, conserved site JDM601_1282 b0792b423bfc4859bf2a227fb0b7dc0a 154 Gene3D G3DSA:1.10.10.10 1 139 3.1E-37 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JDM601_0844 82d1f2113ee39dc66fd817fddf1a32c6 61 Gene3D G3DSA:3.90.180.10 5 61 2.4E-9 T 12-10-2018 JDM601_0844 82d1f2113ee39dc66fd817fddf1a32c6 61 Pfam PF13602 Zinc-binding dehydrogenase 14 57 6.0E-11 T 12-10-2018 JDM601_2384 f4ad839a359f335856fbefd971cc7627 165 Pfam PF00150 Cellulase (glycosyl hydrolase family 5) 23 100 1.8E-11 T 12-10-2018 IPR001547 Glycoside hydrolase, family 5 GO:0004553|GO:0005975 JDM601_2384 f4ad839a359f335856fbefd971cc7627 165 SUPERFAMILY SSF51445 2 131 1.1E-25 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily JDM601_2384 f4ad839a359f335856fbefd971cc7627 165 Gene3D G3DSA:3.20.20.80 2 134 9.7E-61 T 12-10-2018 JDM601_2680 ef62c1c530122925851341e19bd019d8 226 SUPERFAMILY SSF52141 9 225 5.23E-71 T 12-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 JDM601_2680 ef62c1c530122925851341e19bd019d8 226 SMART SM00987 53 213 2.6E-32 T 12-10-2018 JDM601_2680 ef62c1c530122925851341e19bd019d8 226 Gene3D G3DSA:3.40.470.10 1 226 3.4E-86 T 12-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 JDM601_2680 ef62c1c530122925851341e19bd019d8 226 Pfam PF03167 Uracil DNA glycosylase superfamily 56 212 2.2E-17 T 12-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 JDM601_2680 ef62c1c530122925851341e19bd019d8 226 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 11 224 33.793 T 12-10-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 JDM601_2680 ef62c1c530122925851341e19bd019d8 226 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 61 70 - T 12-10-2018 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 JDM601_2680 ef62c1c530122925851341e19bd019d8 226 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 14 215 2.8E-59 T 12-10-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 JDM601_2680 ef62c1c530122925851341e19bd019d8 226 SMART SM00986 53 213 2.6E-32 T 12-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 JDM601_2790 5c1834adb4a1a2bb87126277d481d71e 182 Pfam PF03358 NADPH-dependent FMN reductase 6 149 7.8E-33 T 12-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 JDM601_2790 5c1834adb4a1a2bb87126277d481d71e 182 SUPERFAMILY SSF52218 6 176 6.74E-37 T 12-10-2018 IPR029039 Flavoprotein-like superfamily JDM601_2790 5c1834adb4a1a2bb87126277d481d71e 182 Gene3D G3DSA:3.40.50.360 2 181 1.8E-42 T 12-10-2018 IPR029039 Flavoprotein-like superfamily JDM601_4345 33ca7dacc97034a436c1104e2d2feeba 126 Pfam PF00825 Ribonuclease P 2 116 1.1E-20 T 12-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 JDM601_4345 33ca7dacc97034a436c1104e2d2feeba 126 Gene3D G3DSA:3.30.230.10 1 121 1.5E-17 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup JDM601_4345 33ca7dacc97034a436c1104e2d2feeba 126 SUPERFAMILY SSF54211 2 119 8.85E-19 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold JDM601_4345 33ca7dacc97034a436c1104e2d2feeba 126 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 7 106 1.2E-16 T 12-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 JDM601_4345 33ca7dacc97034a436c1104e2d2feeba 126 ProSitePatterns PS00648 Bacterial ribonuclease P protein component signature. 61 75 - T 12-10-2018 IPR020539 Ribonuclease P, conserved site GO:0004526 JDM601_4345 33ca7dacc97034a436c1104e2d2feeba 126 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 2 121 13.559 T 12-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 JDM601_3756 0a07f605c73c95921ce81fb1e5255e61 336 Gene3D G3DSA:1.10.540.10 8 93 3.2E-6 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 JDM601_3756 0a07f605c73c95921ce81fb1e5255e61 336 SUPERFAMILY SSF47203 197 325 7.41E-28 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 JDM601_3756 0a07f605c73c95921ce81fb1e5255e61 336 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 200 327 2.6E-21 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 JDM601_3756 0a07f605c73c95921ce81fb1e5255e61 336 SUPERFAMILY SSF56645 25 158 7.61E-9 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 JDM601_3756 0a07f605c73c95921ce81fb1e5255e61 336 Gene3D G3DSA:1.20.140.10 196 329 1.3E-29 T 12-10-2018 JDM601_1063 c1e55ee6f091e33034eb8cb658a7618b 136 Pfam PF12120 Rifampin ADP-ribosyl transferase 10 108 1.0E-49 T 12-10-2018 IPR021975 Rifampin ADP-ribosyltransferase JDM601_1063 c1e55ee6f091e33034eb8cb658a7618b 136 Gene3D G3DSA:3.20.170.40 2 136 1.9E-64 T 12-10-2018 IPR038611 Rifampin ADP-ribosyltransferase superfamily JDM601_3345 41e53619dede6a7e42da4ca6e6b97efc 454 TIGRFAM TIGR03965 mycofact_glyco: mycofactocin system glycosyltransferase 1 453 3.3E-177 T 12-10-2018 IPR023981 Putative mycofactocin biosynthesis glycosyltransferase JDM601_3345 41e53619dede6a7e42da4ca6e6b97efc 454 Pfam PF00535 Glycosyl transferase family 2 68 226 4.1E-21 T 12-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 JDM601_3345 41e53619dede6a7e42da4ca6e6b97efc 454 SUPERFAMILY SSF53448 64 304 2.94E-43 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases JDM601_3345 41e53619dede6a7e42da4ca6e6b97efc 454 Gene3D G3DSA:3.90.550.10 60 272 3.4E-37 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases JDM601_2174 d3c41fbef7ccaeab954c8fb9075eb287 261 SUPERFAMILY SSF52096 6 257 2.49E-65 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily JDM601_2174 d3c41fbef7ccaeab954c8fb9075eb287 261 Pfam PF00378 Enoyl-CoA hydratase/isomerase 15 258 7.0E-47 T 12-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 JDM601_2174 d3c41fbef7ccaeab954c8fb9075eb287 261 Gene3D G3DSA:3.90.226.10 4 260 6.6E-68 T 12-10-2018 JDM601_0270 9562b2c34ea5afa34fb34ecf20fb2cd9 72 Pfam PF09957 Bacterial antitoxin of type II TA system, VapB 4 44 8.2E-17 T 12-10-2018 IPR019239 Bacterial antitoxin of type II TA system, VapB JDM601_0875 62495eaf111c16445be529af110ca426 358 Gene3D G3DSA:3.40.50.720 1 106 4.8E-16 T 12-10-2018 JDM601_0875 62495eaf111c16445be529af110ca426 358 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 3 74 4.4E-6 T 12-10-2018 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 JDM601_0875 62495eaf111c16445be529af110ca426 358 SUPERFAMILY SSF51735 1 160 7.61E-15 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_2013 ed993c0ca6ea02645c1806939c2056ae 203 Pfam PF00440 Bacterial regulatory proteins, tetR family 22 67 6.1E-8 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_2013 ed993c0ca6ea02645c1806939c2056ae 203 SUPERFAMILY SSF46689 13 93 5.49E-14 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JDM601_2013 ed993c0ca6ea02645c1806939c2056ae 203 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 22 35 5.5E-6 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_2013 ed993c0ca6ea02645c1806939c2056ae 203 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 42 65 5.5E-6 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_2013 ed993c0ca6ea02645c1806939c2056ae 203 Gene3D G3DSA:1.10.357.10 19 200 3.3E-21 T 12-10-2018 JDM601_2589 9d113a664f4374ea7bbad4c6a91d7f2b 404 Gene3D G3DSA:2.30.42.10 153 240 2.4E-13 T 12-10-2018 JDM601_2589 9d113a664f4374ea7bbad4c6a91d7f2b 404 Pfam PF02163 Peptidase family M50 9 375 6.0E-49 T 12-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 JDM601_2589 9d113a664f4374ea7bbad4c6a91d7f2b 404 SUPERFAMILY SSF50156 99 209 1.84E-11 T 12-10-2018 IPR036034 PDZ superfamily GO:0005515 JDM601_2589 9d113a664f4374ea7bbad4c6a91d7f2b 404 SMART SM00228 107 202 2.4E-5 T 12-10-2018 IPR001478 PDZ domain GO:0005515 JDM601_0726 3c0642303c3cdfc9d3d175371756b60b 245 SUPERFAMILY SSF46785 5 72 1.65E-22 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JDM601_0726 3c0642303c3cdfc9d3d175371756b60b 245 Gene3D G3DSA:1.10.10.10 2 76 7.9E-25 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JDM601_0726 3c0642303c3cdfc9d3d175371756b60b 245 Gene3D G3DSA:3.40.1410.10 80 237 8.9E-25 T 12-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily JDM601_0726 3c0642303c3cdfc9d3d175371756b60b 245 Pfam PF07702 UTRA domain 97 231 1.3E-17 T 12-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 JDM601_0726 3c0642303c3cdfc9d3d175371756b60b 245 Pfam PF00392 Bacterial regulatory proteins, gntR family 6 68 5.4E-21 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 JDM601_0726 3c0642303c3cdfc9d3d175371756b60b 245 SMART SM00345 9 68 8.4E-22 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 JDM601_0726 3c0642303c3cdfc9d3d175371756b60b 245 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 28 42 3.1E-9 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 JDM601_0726 3c0642303c3cdfc9d3d175371756b60b 245 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 42 58 3.1E-9 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 JDM601_0726 3c0642303c3cdfc9d3d175371756b60b 245 SMART SM00866 91 231 1.7E-17 T 12-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 JDM601_0726 3c0642303c3cdfc9d3d175371756b60b 245 SUPERFAMILY SSF64288 57 238 4.4E-28 T 12-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily JDM601_1759 6b01583f252f8b94acb8df66add2a9cf 788 Pfam PF03176 MMPL family 408 720 3.2E-31 T 12-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 JDM601_1759 6b01583f252f8b94acb8df66add2a9cf 788 Pfam PF03176 MMPL family 44 378 6.7E-44 T 12-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 JDM601_1759 6b01583f252f8b94acb8df66add2a9cf 788 SUPERFAMILY SSF82866 504 720 4.05E-27 T 12-10-2018 JDM601_1759 6b01583f252f8b94acb8df66add2a9cf 788 SUPERFAMILY SSF82866 117 336 1.19E-25 T 12-10-2018 JDM601_0472 be64ad328c18738d8808b9d7fa887af7 228 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 123 142 1.9E-6 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0472 be64ad328c18738d8808b9d7fa887af7 228 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 103 111 1.9E-6 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0472 be64ad328c18738d8808b9d7fa887af7 228 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 49 60 1.9E-6 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0472 be64ad328c18738d8808b9d7fa887af7 228 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 97 113 2.2E-14 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0472 be64ad328c18738d8808b9d7fa887af7 228 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 49 60 2.2E-14 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0472 be64ad328c18738d8808b9d7fa887af7 228 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 123 142 2.2E-14 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0472 be64ad328c18738d8808b9d7fa887af7 228 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 144 161 2.2E-14 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0472 be64ad328c18738d8808b9d7fa887af7 228 SUPERFAMILY SSF51735 1 201 7.15E-44 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_0472 be64ad328c18738d8808b9d7fa887af7 228 Gene3D G3DSA:3.40.50.720 1 222 3.1E-47 T 12-10-2018 JDM601_0472 be64ad328c18738d8808b9d7fa887af7 228 Pfam PF00106 short chain dehydrogenase 1 160 9.9E-33 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_4114 63b59ca45e03616b7415cbaa444f1ec8 55 Pfam PF06965 Na+/H+ antiporter 1 1 45 2.1E-9 T 12-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 JDM601_4114 63b59ca45e03616b7415cbaa444f1ec8 55 Gene3D G3DSA:1.20.1530.10 1 53 8.4E-11 T 12-10-2018 IPR023171 Na/H antiporter domain superfamily JDM601_2134 9c58a12a658b685768a3edee3a322fa5 215 TIGRFAM TIGR02234 trp_oprn_chp: membrane protein, TIGR02234 family 11 205 4.7E-46 T 12-10-2018 IPR011746 Trp biosynthesis associated, conserved hypothetical membrane protein JDM601_2134 9c58a12a658b685768a3edee3a322fa5 215 Pfam PF09534 Tryptophan-associated transmembrane protein (Trp_oprn_chp) 18 204 4.2E-46 T 12-10-2018 IPR019051 Trp biosynthesis associated, transmembrane protein, Oprn/Chp JDM601_0779 acbbf4d568c135704644cdd1666dd9c9 252 SUPERFAMILY SSF50494 32 217 1.47E-5 T 12-10-2018 IPR009003 Peptidase S1, PA clan JDM601_1547 62d878e27b6ac38caf68d448c32ee919 513 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 287 460 1.7E-30 T 12-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 JDM601_1547 62d878e27b6ac38caf68d448c32ee919 513 SUPERFAMILY SSF53067 8 267 5.13E-42 T 12-10-2018 JDM601_1547 62d878e27b6ac38caf68d448c32ee919 513 SUPERFAMILY SSF53067 266 506 5.37E-58 T 12-10-2018 JDM601_1547 62d878e27b6ac38caf68d448c32ee919 513 PIRSF PIRSF000538 6 512 3.0E-92 T 12-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 JDM601_1547 62d878e27b6ac38caf68d448c32ee919 513 Gene3D G3DSA:3.30.420.40 5 260 2.0E-55 T 12-10-2018 JDM601_1547 62d878e27b6ac38caf68d448c32ee919 513 Gene3D G3DSA:3.30.420.40 261 512 1.7E-69 T 12-10-2018 JDM601_1547 62d878e27b6ac38caf68d448c32ee919 513 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 8 264 1.4E-30 T 12-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 JDM601_0276 2a6373bd51a33d7a4faa4203a1bea94b 321 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 159 170 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site JDM601_0276 2a6373bd51a33d7a4faa4203a1bea94b 321 Gene3D G3DSA:3.30.70.20 14 264 9.6E-55 T 12-10-2018 JDM601_0276 2a6373bd51a33d7a4faa4203a1bea94b 321 PIRSF PIRSF036298 195 319 5.9E-25 T 12-10-2018 IPR014603 Formate dehydrogenase iron-sulphur subunit GO:0015944|GO:0045333|GO:0051539 JDM601_0276 2a6373bd51a33d7a4faa4203a1bea94b 321 PIRSF PIRSF036298 5 187 2.6E-32 T 12-10-2018 IPR014603 Formate dehydrogenase iron-sulphur subunit GO:0015944|GO:0045333|GO:0051539 JDM601_0276 2a6373bd51a33d7a4faa4203a1bea94b 321 SUPERFAMILY SSF54862 21 292 1.53E-58 T 12-10-2018 JDM601_0276 2a6373bd51a33d7a4faa4203a1bea94b 321 Pfam PF13247 4Fe-4S dicluster domain 119 179 1.5E-10 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain JDM601_0276 2a6373bd51a33d7a4faa4203a1bea94b 321 Pfam PF13247 4Fe-4S dicluster domain 198 231 4.5E-8 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain JDM601_0653 1f514fb6374ca22d01b33b7ee7148f50 154 PIRSF PIRSF001263 1 150 9.2E-51 T 12-10-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00910+4.2.1.104 JDM601_0653 1f514fb6374ca22d01b33b7ee7148f50 154 Hamap MF_00535 Cyanate hydratase [cynS]. 1 154 73.673 T 12-10-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00910+4.2.1.104 JDM601_0653 1f514fb6374ca22d01b33b7ee7148f50 154 SMART SM01116 79 150 8.9E-47 T 12-10-2018 IPR003712 Cyanate lyase, C-terminal GO:0009439 KEGG: 00910+4.2.1.104 JDM601_0653 1f514fb6374ca22d01b33b7ee7148f50 154 Gene3D G3DSA:3.30.1160.10 85 150 6.9E-34 T 12-10-2018 IPR036581 Cyanate lyase, C-terminal domain superfamily GO:0009439 KEGG: 00910+4.2.1.104 JDM601_0653 1f514fb6374ca22d01b33b7ee7148f50 154 Pfam PF02560 Cyanate lyase C-terminal domain 83 149 2.5E-35 T 12-10-2018 IPR003712 Cyanate lyase, C-terminal GO:0009439 KEGG: 00910+4.2.1.104 JDM601_0653 1f514fb6374ca22d01b33b7ee7148f50 154 TIGRFAM TIGR00673 cynS: cyanase 8 149 1.3E-48 T 12-10-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00910+4.2.1.104 JDM601_0653 1f514fb6374ca22d01b33b7ee7148f50 154 SUPERFAMILY SSF47413 4 81 1.13E-18 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 JDM601_0653 1f514fb6374ca22d01b33b7ee7148f50 154 PRINTS PR01693 Cyanase signature 18 33 5.5E-28 T 12-10-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00910+4.2.1.104 JDM601_0653 1f514fb6374ca22d01b33b7ee7148f50 154 PRINTS PR01693 Cyanase signature 87 101 5.5E-28 T 12-10-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00910+4.2.1.104 JDM601_0653 1f514fb6374ca22d01b33b7ee7148f50 154 PRINTS PR01693 Cyanase signature 38 55 5.5E-28 T 12-10-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00910+4.2.1.104 JDM601_0653 1f514fb6374ca22d01b33b7ee7148f50 154 PRINTS PR01693 Cyanase signature 136 146 5.5E-28 T 12-10-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00910+4.2.1.104 JDM601_0653 1f514fb6374ca22d01b33b7ee7148f50 154 PRINTS PR01693 Cyanase signature 105 121 5.5E-28 T 12-10-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00910+4.2.1.104 JDM601_0653 1f514fb6374ca22d01b33b7ee7148f50 154 SUPERFAMILY SSF55234 84 150 1.96E-29 T 12-10-2018 IPR036581 Cyanate lyase, C-terminal domain superfamily GO:0009439 KEGG: 00910+4.2.1.104 JDM601_0653 1f514fb6374ca22d01b33b7ee7148f50 154 Gene3D G3DSA:1.10.260.40 1 84 5.8E-25 T 12-10-2018 JDM601_3429 439d9ec48481f006c15ea4d3eec51449 432 PRINTS PR00385 P450 superfamily signature 253 270 3.1E-5 T 12-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_3429 439d9ec48481f006c15ea4d3eec51449 432 PRINTS PR00385 P450 superfamily signature 364 375 3.1E-5 T 12-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_3429 439d9ec48481f006c15ea4d3eec51449 432 PRINTS PR00385 P450 superfamily signature 288 299 3.1E-5 T 12-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_3429 439d9ec48481f006c15ea4d3eec51449 432 PRINTS PR00385 P450 superfamily signature 355 364 3.1E-5 T 12-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_3429 439d9ec48481f006c15ea4d3eec51449 432 Pfam PF00067 Cytochrome P450 219 384 1.0E-23 T 12-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_3429 439d9ec48481f006c15ea4d3eec51449 432 SUPERFAMILY SSF48264 13 394 2.62E-81 T 12-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_3429 439d9ec48481f006c15ea4d3eec51449 432 Gene3D G3DSA:1.10.630.10 2 427 8.8E-99 T 12-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_3429 439d9ec48481f006c15ea4d3eec51449 432 PRINTS PR00359 B-class P450 signature 101 112 5.7E-37 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3429 439d9ec48481f006c15ea4d3eec51449 432 PRINTS PR00359 B-class P450 signature 288 299 5.7E-37 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3429 439d9ec48481f006c15ea4d3eec51449 432 PRINTS PR00359 B-class P450 signature 147 163 5.7E-37 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3429 439d9ec48481f006c15ea4d3eec51449 432 PRINTS PR00359 B-class P450 signature 206 228 5.7E-37 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3429 439d9ec48481f006c15ea4d3eec51449 432 PRINTS PR00359 B-class P450 signature 164 179 5.7E-37 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3429 439d9ec48481f006c15ea4d3eec51449 432 PRINTS PR00359 B-class P450 signature 333 348 5.7E-37 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3429 439d9ec48481f006c15ea4d3eec51449 432 PRINTS PR00359 B-class P450 signature 305 332 5.7E-37 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3429 439d9ec48481f006c15ea4d3eec51449 432 PRINTS PR00359 B-class P450 signature 355 364 5.7E-37 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3429 439d9ec48481f006c15ea4d3eec51449 432 PRINTS PR00359 B-class P450 signature 364 375 5.7E-37 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_2234 b61c6f6a7a91e839d120745e99f580dd 324 Gene3D G3DSA:3.40.50.410 97 288 7.7E-6 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily JDM601_2234 b61c6f6a7a91e839d120745e99f580dd 324 SUPERFAMILY SSF53300 102 230 3.71E-6 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily JDM601_2234 b61c6f6a7a91e839d120745e99f580dd 324 Pfam PF01882 Protein of unknown function DUF58 63 146 2.0E-20 T 12-10-2018 IPR002881 Domain of unknown function DUF58 JDM601_2968 11628cc816ab8557162202ce6234dfc0 271 Gene3D G3DSA:3.40.50.300 2 250 7.0E-92 T 12-10-2018 JDM601_2968 11628cc816ab8557162202ce6234dfc0 271 TIGRFAM TIGR03707 PPK2_P_aer: polyphosphate kinase 2 8 232 5.1E-111 T 12-10-2018 IPR022486 Polyphosphate kinase 2, PA0141 GO:0006793|GO:0008976 KEGG: 00190+2.7.4.1 JDM601_2968 11628cc816ab8557162202ce6234dfc0 271 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 9 232 2.9E-106 T 12-10-2018 IPR022488 Polyphosphate kinase-2-related JDM601_2968 11628cc816ab8557162202ce6234dfc0 271 SUPERFAMILY SSF52540 39 223 2.01E-28 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_2968 11628cc816ab8557162202ce6234dfc0 271 PIRSF PIRSF028756 1 264 1.4E-122 T 12-10-2018 IPR016898 Polyphosphate kinase 2 KEGG: 00190+2.7.4.1 JDM601_0776 47731ad541f4e0cb90ba9f9fd63b767a 80 Pfam PF13551 Winged helix-turn helix 11 68 1.9E-13 T 12-10-2018 JDM601_0776 47731ad541f4e0cb90ba9f9fd63b767a 80 SUPERFAMILY SSF46689 10 66 8.87E-11 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JDM601_1797 a52c661711b690444af946d20d328fca 78 Hamap MF_00634 UPF0235 protein YggU [yggU]. 1 78 14.202 T 12-10-2018 IPR003746 Protein of unknown function DUF167 JDM601_1797 a52c661711b690444af946d20d328fca 78 SMART SM01152 3 78 1.5E-25 T 12-10-2018 IPR003746 Protein of unknown function DUF167 JDM601_1797 a52c661711b690444af946d20d328fca 78 Gene3D G3DSA:3.30.1200.10 2 78 7.0E-20 T 12-10-2018 IPR036591 YggU-like superfamily JDM601_1797 a52c661711b690444af946d20d328fca 78 SUPERFAMILY SSF69786 5 77 2.88E-19 T 12-10-2018 IPR036591 YggU-like superfamily JDM601_1797 a52c661711b690444af946d20d328fca 78 Pfam PF02594 Uncharacterised ACR, YggU family COG1872 7 76 6.9E-22 T 12-10-2018 IPR003746 Protein of unknown function DUF167 JDM601_2458 2a77e451600c0ea314d1d128a4138808 166 SMART SM00257 115 164 6.2E-4 T 12-10-2018 IPR018392 LysM domain JDM601_2458 2a77e451600c0ea314d1d128a4138808 166 Pfam PF01476 LysM domain 117 164 4.8E-6 T 12-10-2018 IPR018392 LysM domain JDM601_2458 2a77e451600c0ea314d1d128a4138808 166 Gene3D G3DSA:3.10.350.10 114 164 7.6E-7 T 12-10-2018 IPR036779 LysM domain superfamily JDM601_1993 2a83695153d31a1b87cd3fb5970b5c6f 104 Gene3D G3DSA:3.30.70.930 1 99 2.3E-25 T 12-10-2018 IPR029756 MTH1187/YkoF-like JDM601_1993 2a83695153d31a1b87cd3fb5970b5c6f 104 SUPERFAMILY SSF89957 2 98 3.14E-26 T 12-10-2018 IPR029756 MTH1187/YkoF-like JDM601_1993 2a83695153d31a1b87cd3fb5970b5c6f 104 TIGRFAM TIGR00106 TIGR00106: uncharacterized protein, MTH1187 family 4 97 3.0E-16 T 12-10-2018 IPR002767 Thiamine-binding protein JDM601_1993 2a83695153d31a1b87cd3fb5970b5c6f 104 Pfam PF01910 Thiamine-binding protein 5 95 5.0E-27 T 12-10-2018 IPR002767 Thiamine-binding protein JDM601_0174 da0b5a7b3b79582134661e6abce1b0f8 606 PIRSF PIRSF001348 1 606 1.0E-289 T 12-10-2018 IPR008209 Phosphoenolpyruvate carboxykinase, GTP-utilising GO:0004611|GO:0005525|GO:0006094 KEGG: 00010+4.1.1.32|KEGG: 00020+4.1.1.32|KEGG: 00620+4.1.1.32|MetaCyc: PWY-7383|Reactome: R-HSA-70263 JDM601_0174 da0b5a7b3b79582134661e6abce1b0f8 606 Gene3D G3DSA:3.90.228.20 245 604 1.8E-284 T 12-10-2018 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 JDM601_0174 da0b5a7b3b79582134661e6abce1b0f8 606 Hamap MF_00452 Phosphoenolpyruvate carboxykinase [GTP] [pckG]. 10 606 51.063 T 12-10-2018 IPR008209 Phosphoenolpyruvate carboxykinase, GTP-utilising GO:0004611|GO:0005525|GO:0006094 KEGG: 00010+4.1.1.32|KEGG: 00020+4.1.1.32|KEGG: 00620+4.1.1.32|MetaCyc: PWY-7383|Reactome: R-HSA-70263 JDM601_0174 da0b5a7b3b79582134661e6abce1b0f8 606 Pfam PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain 245 605 1.7E-171 T 12-10-2018 IPR035077 Phosphoenolpyruvate carboxykinase, GTP-utilising, C-terminal GO:0004611|GO:0006094 KEGG: 00010+4.1.1.32|KEGG: 00020+4.1.1.32|KEGG: 00620+4.1.1.32|MetaCyc: PWY-7383|Reactome: R-HSA-70263 JDM601_0174 da0b5a7b3b79582134661e6abce1b0f8 606 Gene3D G3DSA:3.40.449.10 22 244 1.8E-284 T 12-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 JDM601_0174 da0b5a7b3b79582134661e6abce1b0f8 606 Gene3D G3DSA:2.170.8.10 57 400 1.8E-284 T 12-10-2018 JDM601_0174 da0b5a7b3b79582134661e6abce1b0f8 606 SUPERFAMILY SSF53795 245 605 7.1E-158 T 12-10-2018 JDM601_0174 da0b5a7b3b79582134661e6abce1b0f8 606 SUPERFAMILY SSF68923 12 244 3.98E-98 T 12-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 JDM601_0174 da0b5a7b3b79582134661e6abce1b0f8 606 ProSitePatterns PS00505 Phosphoenolpyruvate carboxykinase (GTP) signature. 269 277 - T 12-10-2018 IPR018091 Phosphoenolpyruvate carboxykinase, GTP-utilising, conserved site GO:0004613 KEGG: 00010+4.1.1.32|KEGG: 00020+4.1.1.32|KEGG: 00620+4.1.1.32|MetaCyc: PWY-7383|Reactome: R-HSA-70263 JDM601_0174 da0b5a7b3b79582134661e6abce1b0f8 606 Pfam PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain 22 240 3.2E-103 T 12-10-2018 IPR035078 Phosphoenolpyruvate carboxykinase, GTP-utilising, N-terminal GO:0004611|GO:0006094 KEGG: 00010+4.1.1.32|KEGG: 00020+4.1.1.32|KEGG: 00620+4.1.1.32|MetaCyc: PWY-7383|Reactome: R-HSA-70263 JDM601_1923 1cb5c753828da3508a879c0cc1759a65 244 Pfam PF00376 MerR family regulatory protein 24 54 8.9E-12 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 JDM601_1923 1cb5c753828da3508a879c0cc1759a65 244 SMART SM00422 12 86 2.0E-21 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 JDM601_1923 1cb5c753828da3508a879c0cc1759a65 244 Gene3D G3DSA:1.10.1660.10 6 107 1.5E-15 T 12-10-2018 JDM601_1923 1cb5c753828da3508a879c0cc1759a65 244 SUPERFAMILY SSF46955 26 94 3.94E-12 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily JDM601_2918 02576d252c29fd3211889fa2b7b1dc6d 262 Pfam PF12697 Alpha/beta hydrolase family 20 253 6.5E-19 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 JDM601_2918 02576d252c29fd3211889fa2b7b1dc6d 262 SUPERFAMILY SSF53474 4 261 3.19E-40 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_2918 02576d252c29fd3211889fa2b7b1dc6d 262 Gene3D G3DSA:3.40.50.1820 2 259 8.4E-44 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_2918 02576d252c29fd3211889fa2b7b1dc6d 262 PRINTS PR00111 Alpha/beta hydrolase fold signature 85 98 5.2E-9 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 JDM601_2918 02576d252c29fd3211889fa2b7b1dc6d 262 PRINTS PR00111 Alpha/beta hydrolase fold signature 42 57 5.2E-9 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 JDM601_2918 02576d252c29fd3211889fa2b7b1dc6d 262 PRINTS PR00111 Alpha/beta hydrolase fold signature 99 112 5.2E-9 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 JDM601_3183 93882cf1b71b10cf6eaee483001fdd60 584 SMART SM00382 33 221 7.1E-17 T 12-10-2018 IPR003593 AAA+ ATPase domain JDM601_3183 93882cf1b71b10cf6eaee483001fdd60 584 SUPERFAMILY SSF52540 3 220 1.18E-50 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_3183 93882cf1b71b10cf6eaee483001fdd60 584 Pfam PF11575 FhuF 2Fe-2S C-terminal domain 549 569 7.3E-8 T 12-10-2018 IPR024726 Ferric iron reductase, C-terminal GO:0051537 JDM601_3183 93882cf1b71b10cf6eaee483001fdd60 584 Gene3D G3DSA:3.40.50.300 7 250 4.7E-55 T 12-10-2018 JDM601_3183 93882cf1b71b10cf6eaee483001fdd60 584 Pfam PF00005 ABC transporter 26 173 1.8E-24 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JDM601_2495 6d6b45b4e57a46421cb276546c6b0862 180 PIRSF PIRSF000847 1 180 4.0E-42 T 12-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 JDM601_2495 6d6b45b4e57a46421cb276546c6b0862 180 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 3 177 4.7E-38 T 12-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 JDM601_2495 6d6b45b4e57a46421cb276546c6b0862 180 Pfam PF01066 CDP-alcohol phosphatidyltransferase 3 73 6.4E-13 T 12-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 JDM601_2495 6d6b45b4e57a46421cb276546c6b0862 180 Gene3D G3DSA:1.20.120.1760 4 172 1.1E-9 T 12-10-2018 JDM601_2495 6d6b45b4e57a46421cb276546c6b0862 180 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 51 73 - T 12-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 JDM601_0447 f96947dc16451720af34c7f38588d7e8 138 SUPERFAMILY SSF88723 1 122 1.46E-19 T 12-10-2018 IPR029060 PIN-like domain superfamily JDM601_0447 f96947dc16451720af34c7f38588d7e8 138 Pfam PF01850 PIN domain 3 119 3.8E-11 T 12-10-2018 IPR002716 PIN domain JDM601_0447 f96947dc16451720af34c7f38588d7e8 138 Gene3D G3DSA:3.40.50.1010 3 125 3.3E-10 T 12-10-2018 JDM601_1565 bac9eba00d33fdc25a5b87e03dcaec7b 406 SUPERFAMILY SSF53335 33 183 1.47E-21 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JDM601_1565 bac9eba00d33fdc25a5b87e03dcaec7b 406 Gene3D G3DSA:3.40.50.150 31 244 1.9E-19 T 12-10-2018 JDM601_1565 bac9eba00d33fdc25a5b87e03dcaec7b 406 Pfam PF13847 Methyltransferase domain 57 158 2.0E-14 T 12-10-2018 IPR025714 Methyltransferase domain JDM601_1909 1b3881e6498ed6f3b18a778fc25d422e 237 Pfam PF02308 MgtC family 13 133 2.3E-33 T 12-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 JDM601_1909 1b3881e6498ed6f3b18a778fc25d422e 237 Gene3D G3DSA:3.30.70.260 142 234 1.4E-32 T 12-10-2018 JDM601_1909 1b3881e6498ed6f3b18a778fc25d422e 237 PRINTS PR01837 MgtC/SapB protein signature 35 53 9.8E-40 T 12-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 JDM601_1909 1b3881e6498ed6f3b18a778fc25d422e 237 PRINTS PR01837 MgtC/SapB protein signature 60 82 9.8E-40 T 12-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 JDM601_1909 1b3881e6498ed6f3b18a778fc25d422e 237 PRINTS PR01837 MgtC/SapB protein signature 16 35 9.8E-40 T 12-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 JDM601_1909 1b3881e6498ed6f3b18a778fc25d422e 237 PRINTS PR01837 MgtC/SapB protein signature 87 111 9.8E-40 T 12-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 JDM601_0405 ebcda5981c53230eb7138dd358fd0d5c 141 Pfam PF13399 LytR cell envelope-related transcriptional attenuator 55 140 1.4E-13 T 12-10-2018 IPR027381 Putative LytR/CpsA/Psr regulator, C-terminal domain JDM601_0405 ebcda5981c53230eb7138dd358fd0d5c 141 Gene3D G3DSA:3.30.70.2390 52 141 7.7E-30 T 12-10-2018 JDM601_1098 fbfdb3ca7a9a318f23dad794aa220bd1 374 TIGRFAM TIGR00996 Mtu_fam_mce: virulence factor Mce family protein 10 295 4.5E-46 T 12-10-2018 IPR005693 Virulence factor Mce protein JDM601_1098 fbfdb3ca7a9a318f23dad794aa220bd1 374 Pfam PF02470 MlaD protein 33 106 1.6E-12 T 12-10-2018 IPR003399 Mce/MlaD JDM601_1120 d939510819171f2f1fce82c14440fdc4 239 Pfam PF02517 CAAX protease self-immunity 143 226 6.5E-8 T 12-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 JDM601_1053 25283166fde8cccbdb608cf18733253e 298 Pfam PF01594 AI-2E family transporter 5 263 6.7E-45 T 12-10-2018 IPR002549 Transmembrane protein TqsA-like JDM601_1493 62d9ff8e1827fe67d1c07eff78a292d6 147 Pfam PF05423 Mycobacterium membrane protein 10 146 2.5E-47 T 12-10-2018 IPR008693 Transport accessory protein MmpS JDM601_1493 62d9ff8e1827fe67d1c07eff78a292d6 147 Gene3D G3DSA:2.60.40.2880 58 147 5.1E-30 T 12-10-2018 IPR038468 Transport accessory protein MmpS, soluble domain superfamily JDM601_3039 8245d3686d525b114bbb38009c0980ed 549 Pfam PF01039 Carboxyl transferase domain 50 547 6.1E-196 T 12-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 JDM601_3039 8245d3686d525b114bbb38009c0980ed 549 Gene3D G3DSA:3.90.226.10 21 280 9.4E-95 T 12-10-2018 JDM601_3039 8245d3686d525b114bbb38009c0980ed 549 SUPERFAMILY SSF52096 294 549 2.63E-85 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily JDM601_3039 8245d3686d525b114bbb38009c0980ed 549 Gene3D G3DSA:3.90.226.10 283 549 1.7E-94 T 12-10-2018 JDM601_3039 8245d3686d525b114bbb38009c0980ed 549 SUPERFAMILY SSF52096 28 278 4.5E-74 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily JDM601_2348 0466c7c9c4282f69a34f9c1a3d6846aa 227 Pfam PF02720 Domain of unknown function (DUF222) 8 227 1.4E-51 T 12-10-2018 IPR003870 Domain of unknown function DUF222 JDM601_3507 ebeeed8d7433550352b20f81e3cdaabb 373 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 121 216 2.4E-22 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 JDM601_3507 ebeeed8d7433550352b20f81e3cdaabb 373 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 8 117 1.7E-8 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 JDM601_3507 ebeeed8d7433550352b20f81e3cdaabb 373 Gene3D G3DSA:2.40.110.10 121 232 2.5E-34 T 12-10-2018 JDM601_3507 ebeeed8d7433550352b20f81e3cdaabb 373 Gene3D G3DSA:1.10.540.10 5 116 5.7E-15 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 JDM601_3507 ebeeed8d7433550352b20f81e3cdaabb 373 Gene3D G3DSA:1.20.140.10 233 373 4.7E-18 T 12-10-2018 JDM601_3507 ebeeed8d7433550352b20f81e3cdaabb 373 SUPERFAMILY SSF56645 9 240 2.36E-52 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 JDM601_3507 ebeeed8d7433550352b20f81e3cdaabb 373 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 228 368 9.4E-13 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 JDM601_3507 ebeeed8d7433550352b20f81e3cdaabb 373 SUPERFAMILY SSF47203 228 369 3.06E-16 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 JDM601_1081 39e5217ce59308e3e956d71295fd229b 305 ProSitePatterns PS00161 Isocitrate lyase signature. 127 132 - T 12-10-2018 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824 JDM601_1081 39e5217ce59308e3e956d71295fd229b 305 Pfam PF13714 Phosphoenolpyruvate phosphomutase 18 260 4.8E-50 T 12-10-2018 JDM601_1081 39e5217ce59308e3e956d71295fd229b 305 SUPERFAMILY SSF51621 9 298 7.63E-93 T 12-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 JDM601_1081 39e5217ce59308e3e956d71295fd229b 305 Gene3D G3DSA:3.20.20.60 3 303 1.1E-99 T 12-10-2018 JDM601_1081 39e5217ce59308e3e956d71295fd229b 305 Hamap MF_01939 2-methylisocitrate lyase [prpB]. 12 298 47.359 T 12-10-2018 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747 JDM601_1081 39e5217ce59308e3e956d71295fd229b 305 TIGRFAM TIGR02317 prpB: methylisocitrate lyase 15 297 1.7E-121 T 12-10-2018 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747 JDM601_0371 5f530effc8c7379f5ea16037b71d2d2d 237 Pfam PF13714 Phosphoenolpyruvate phosphomutase 1 222 1.4E-60 T 12-10-2018 JDM601_0371 5f530effc8c7379f5ea16037b71d2d2d 237 Gene3D G3DSA:3.20.20.60 1 218 7.7E-63 T 12-10-2018 JDM601_0371 5f530effc8c7379f5ea16037b71d2d2d 237 SUPERFAMILY SSF51621 1 230 8.52E-55 T 12-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 JDM601_3865 e2a08ace9141e4fd6927aa226a501f89 712 SUPERFAMILY SSF56645 11 190 1.69E-16 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 JDM601_3865 e2a08ace9141e4fd6927aa226a501f89 712 SUPERFAMILY SSF56645 366 577 8.77E-57 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 JDM601_3865 e2a08ace9141e4fd6927aa226a501f89 712 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 12 102 1.9E-9 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 JDM601_3865 e2a08ace9141e4fd6927aa226a501f89 712 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 359 454 2.0E-11 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 JDM601_3865 e2a08ace9141e4fd6927aa226a501f89 712 SUPERFAMILY SSF47203 203 337 7.73E-30 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 JDM601_3865 e2a08ace9141e4fd6927aa226a501f89 712 Gene3D G3DSA:1.20.140.10 569 712 1.5E-21 T 12-10-2018 JDM601_3865 e2a08ace9141e4fd6927aa226a501f89 712 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 564 707 2.3E-13 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 JDM601_3865 e2a08ace9141e4fd6927aa226a501f89 712 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 209 324 3.2E-19 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 JDM601_3865 e2a08ace9141e4fd6927aa226a501f89 712 Gene3D G3DSA:2.40.110.10 458 568 2.4E-32 T 12-10-2018 JDM601_3865 e2a08ace9141e4fd6927aa226a501f89 712 SUPERFAMILY SSF47203 564 711 1.93E-13 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 JDM601_3865 e2a08ace9141e4fd6927aa226a501f89 712 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 458 540 7.0E-18 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 JDM601_3865 e2a08ace9141e4fd6927aa226a501f89 712 Gene3D G3DSA:1.10.540.10 341 453 1.9E-15 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 JDM601_3865 e2a08ace9141e4fd6927aa226a501f89 712 Gene3D G3DSA:1.20.140.10 204 340 3.3E-31 T 12-10-2018 JDM601_3865 e2a08ace9141e4fd6927aa226a501f89 712 Gene3D G3DSA:1.10.540.10 8 111 3.2E-15 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 JDM601_1843 c796f8ac6b268d80508702a8b9fd3515 74 Pfam PF03966 Trm112p-like protein 3 44 7.7E-8 T 12-10-2018 IPR005651 Trm112-like JDM601_1843 c796f8ac6b268d80508702a8b9fd3515 74 Gene3D G3DSA:2.20.25.10 9 64 7.2E-18 T 12-10-2018 JDM601_1843 c796f8ac6b268d80508702a8b9fd3515 74 SUPERFAMILY SSF158997 2 59 1.15E-14 T 12-10-2018 JDM601_4080 b60d95e995ce45b23d1ac7d4699197ba 183 Pfam PF10759 Protein of unknown function (DUF2587) 33 175 8.4E-77 T 12-10-2018 IPR019695 Bacterial proteasome activator GO:0061136 JDM601_2700 95d733be79a33ac53c8424da8eb49121 300 Gene3D G3DSA:2.60.120.620 5 299 2.9E-110 T 12-10-2018 JDM601_2700 95d733be79a33ac53c8424da8eb49121 300 SUPERFAMILY SSF51197 38 297 6.32E-64 T 12-10-2018 JDM601_2700 95d733be79a33ac53c8424da8eb49121 300 Pfam PF05721 Phytanoyl-CoA dioxygenase (PhyH) 49 264 3.2E-36 T 12-10-2018 IPR008775 Phytanoyl-CoA dioxygenase JDM601_2700 95d733be79a33ac53c8424da8eb49121 300 TIGRFAM TIGR02408 ectoine_ThpD: ectoine hydroxylase 25 300 1.9E-128 T 12-10-2018 IPR012774 Ectoine dioxygenase GO:0016706|GO:0055114 JDM601_2660 5d45517180d9d8b03ff4c9c86c0b2815 297 Gene3D G3DSA:3.30.70.260 18 101 2.9E-19 T 12-10-2018 JDM601_2660 5d45517180d9d8b03ff4c9c86c0b2815 297 SUPERFAMILY SSF53328 103 296 1.96E-55 T 12-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 JDM601_2660 5d45517180d9d8b03ff4c9c86c0b2815 297 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 19 297 6.6E-121 T 12-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 JDM601_2660 5d45517180d9d8b03ff4c9c86c0b2815 297 SUPERFAMILY SSF55021 19 93 1.5E-11 T 12-10-2018 JDM601_2660 5d45517180d9d8b03ff4c9c86c0b2815 297 Pfam PF01842 ACT domain 20 81 4.3E-8 T 12-10-2018 IPR002912 ACT domain JDM601_2660 5d45517180d9d8b03ff4c9c86c0b2815 297 Pfam PF00551 Formyl transferase 103 279 3.8E-38 T 12-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 JDM601_2660 5d45517180d9d8b03ff4c9c86c0b2815 297 Gene3D G3DSA:3.40.50.170 103 297 7.0E-65 T 12-10-2018 JDM601_2660 5d45517180d9d8b03ff4c9c86c0b2815 297 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 271 296 9.3E-54 T 12-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 JDM601_2660 5d45517180d9d8b03ff4c9c86c0b2815 297 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 53 65 9.3E-54 T 12-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 JDM601_2660 5d45517180d9d8b03ff4c9c86c0b2815 297 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 249 271 9.3E-54 T 12-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 JDM601_2660 5d45517180d9d8b03ff4c9c86c0b2815 297 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 20 46 9.3E-54 T 12-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 JDM601_2660 5d45517180d9d8b03ff4c9c86c0b2815 297 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 104 126 9.3E-54 T 12-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 JDM601_2660 5d45517180d9d8b03ff4c9c86c0b2815 297 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 126 153 9.3E-54 T 12-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 JDM601_2660 5d45517180d9d8b03ff4c9c86c0b2815 297 PIRSF PIRSF036480 16 297 5.8E-106 T 12-10-2018 JDM601_2660 5d45517180d9d8b03ff4c9c86c0b2815 297 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 15 297 42.46 T 12-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 JDM601_2398 2258263ae2a27b93d55b784b69ab743e 204 Pfam PF03061 Thioesterase superfamily 114 189 6.4E-8 T 12-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 JDM601_2398 2258263ae2a27b93d55b784b69ab743e 204 Gene3D G3DSA:1.20.58.350 27 69 2.9E-39 T 12-10-2018 JDM601_2398 2258263ae2a27b93d55b784b69ab743e 204 SUPERFAMILY SSF54637 10 197 1.01E-41 T 12-10-2018 IPR029069 HotDog domain superfamily JDM601_2398 2258263ae2a27b93d55b784b69ab743e 204 Gene3D G3DSA:3.10.129.10 70 197 2.9E-39 T 12-10-2018 JDM601_1018 e5e6fd34a26dc894216cd9f67c4ec4ac 287 Pfam PF12811 Bax inhibitor 1 like 39 286 2.2E-85 T 12-10-2018 IPR010539 Protein of unknown function UCP009160 JDM601_1018 e5e6fd34a26dc894216cd9f67c4ec4ac 287 PIRSF PIRSF009160 1 287 1.5E-91 T 12-10-2018 IPR010539 Protein of unknown function UCP009160 JDM601_3299 0649a844177bf76caa3ffc077870ab4b 262 Pfam PF00557 Metallopeptidase family M24 19 253 4.4E-40 T 12-10-2018 IPR000994 Peptidase M24 JDM601_3299 0649a844177bf76caa3ffc077870ab4b 262 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 13 260 7.5E-77 T 12-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 JDM601_3299 0649a844177bf76caa3ffc077870ab4b 262 SUPERFAMILY SSF55920 12 260 6.02E-73 T 12-10-2018 IPR036005 Creatinase/aminopeptidase-like JDM601_3299 0649a844177bf76caa3ffc077870ab4b 262 Hamap MF_01974 Methionine aminopeptidase [map]. 9 262 36.696 T 12-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 JDM601_3299 0649a844177bf76caa3ffc077870ab4b 262 PRINTS PR00599 Methionine aminopeptidase-1 signature 204 216 6.8E-20 T 12-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 JDM601_3299 0649a844177bf76caa3ffc077870ab4b 262 PRINTS PR00599 Methionine aminopeptidase-1 signature 74 87 6.8E-20 T 12-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 JDM601_3299 0649a844177bf76caa3ffc077870ab4b 262 PRINTS PR00599 Methionine aminopeptidase-1 signature 173 185 6.8E-20 T 12-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 JDM601_3299 0649a844177bf76caa3ffc077870ab4b 262 PRINTS PR00599 Methionine aminopeptidase-1 signature 97 113 6.8E-20 T 12-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 JDM601_3299 0649a844177bf76caa3ffc077870ab4b 262 Gene3D G3DSA:3.90.230.10 6 261 1.1E-86 T 12-10-2018 JDM601_0973 2df40d13fd36f38e80220dde10561536 218 SUPERFAMILY SSF140459 5 177 2.28E-25 T 12-10-2018 JDM601_0973 2df40d13fd36f38e80220dde10561536 218 Pfam PF00823 PPE family 9 166 1.3E-21 T 12-10-2018 IPR000030 PPE family JDM601_0973 2df40d13fd36f38e80220dde10561536 218 Gene3D G3DSA:1.20.1260.20 3 180 1.2E-24 T 12-10-2018 IPR038332 PPE superfamily JDM601_4216 14f2bfbda8676d79f3e916f1a0bcbc48 190 Gene3D G3DSA:1.10.357.10 6 189 2.0E-43 T 12-10-2018 JDM601_4216 14f2bfbda8676d79f3e916f1a0bcbc48 190 SUPERFAMILY SSF46689 13 76 1.9E-9 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JDM601_4216 14f2bfbda8676d79f3e916f1a0bcbc48 190 Pfam PF00440 Bacterial regulatory proteins, tetR family 20 64 7.5E-7 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_2981 723deec234b3f57ba2967b446c61d736 239 Gene3D G3DSA:1.10.10.10 149 217 1.4E-17 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JDM601_2981 723deec234b3f57ba2967b446c61d736 239 Pfam PF13545 Crp-like helix-turn-helix domain 149 216 2.0E-14 T 12-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 JDM601_2981 723deec234b3f57ba2967b446c61d736 239 SUPERFAMILY SSF51206 6 126 1.26E-9 T 12-10-2018 IPR018490 Cyclic nucleotide-binding-like JDM601_2981 723deec234b3f57ba2967b446c61d736 239 SUPERFAMILY SSF46785 147 221 1.63E-17 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JDM601_2981 723deec234b3f57ba2967b446c61d736 239 Gene3D G3DSA:2.60.120.10 6 148 4.7E-7 T 12-10-2018 IPR014710 RmlC-like jelly roll fold JDM601_1969 1a528002c8ee918a5b8542036d7391ef 152 SUPERFAMILY SSF69118 2 140 2.44E-31 T 12-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 JDM601_1969 1a528002c8ee918a5b8542036d7391ef 152 Gene3D G3DSA:1.20.1290.10 1 144 7.1E-29 T 12-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 JDM601_1969 1a528002c8ee918a5b8542036d7391ef 152 Pfam PF02627 Carboxymuconolactone decarboxylase family 8 89 8.8E-7 T 12-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 JDM601_3516 64eb598768691fc7441c6d11fa60d87d 301 SUPERFAMILY SSF47203 166 285 4.19E-29 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 JDM601_3516 64eb598768691fc7441c6d11fa60d87d 301 Gene3D G3DSA:1.20.140.10 149 296 1.1E-29 T 12-10-2018 JDM601_3516 64eb598768691fc7441c6d11fa60d87d 301 Gene3D G3DSA:1.10.540.10 1 96 1.8E-5 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 JDM601_3516 64eb598768691fc7441c6d11fa60d87d 301 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 169 284 1.9E-17 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 JDM601_3516 64eb598768691fc7441c6d11fa60d87d 301 SUPERFAMILY SSF56645 1 80 9.66E-7 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 JDM601_1973 4a2d176c93189628deaad2ab77d02f5e 326 Gene3D G3DSA:3.40.50.1820 37 320 1.3E-83 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_1973 4a2d176c93189628deaad2ab77d02f5e 326 Pfam PF00756 Putative esterase 51 313 1.0E-64 T 12-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 JDM601_1973 4a2d176c93189628deaad2ab77d02f5e 326 SUPERFAMILY SSF53474 37 319 3.15E-38 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_3596 2a6b5438c781990bb9af2c67f3c61380 254 SUPERFAMILY SSF52096 7 251 2.21E-65 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily JDM601_3596 2a6b5438c781990bb9af2c67f3c61380 254 Gene3D G3DSA:3.90.226.10 2 218 1.4E-73 T 12-10-2018 JDM601_3596 2a6b5438c781990bb9af2c67f3c61380 254 Pfam PF00378 Enoyl-CoA hydratase/isomerase 14 250 1.2E-44 T 12-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 JDM601_0494 d82aac47f18e824aad406574093eadf8 283 Pfam PF13622 Thioesterase-like superfamily 35 280 3.6E-41 T 12-10-2018 JDM601_0494 d82aac47f18e824aad406574093eadf8 283 Gene3D G3DSA:3.10.129.90 2 281 4.1E-64 T 12-10-2018 JDM601_0494 d82aac47f18e824aad406574093eadf8 283 SUPERFAMILY SSF54637 33 122 3.32E-8 T 12-10-2018 IPR029069 HotDog domain superfamily JDM601_0494 d82aac47f18e824aad406574093eadf8 283 SUPERFAMILY SSF54637 155 280 3.93E-7 T 12-10-2018 IPR029069 HotDog domain superfamily JDM601_3694 0863c46d5c7bd4f9f1d05ad28369fad4 383 PIRSF PIRSF000429 1 383 1.7E-115 T 12-10-2018 IPR002155 Thiolase GO:0016747 JDM601_3694 0863c46d5c7bd4f9f1d05ad28369fad4 383 SUPERFAMILY SSF53901 5 260 8.02E-60 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 JDM601_3694 0863c46d5c7bd4f9f1d05ad28369fad4 383 ProSitePatterns PS00737 Thiolases signature 2. 329 345 - T 12-10-2018 IPR020613 Thiolase, conserved site GO:0016747 JDM601_3694 0863c46d5c7bd4f9f1d05ad28369fad4 383 Gene3D G3DSA:3.40.47.10 125 374 4.7E-127 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 JDM601_3694 0863c46d5c7bd4f9f1d05ad28369fad4 383 Pfam PF02803 Thiolase, C-terminal domain 260 382 5.2E-38 T 12-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 JDM601_3694 0863c46d5c7bd4f9f1d05ad28369fad4 383 Pfam PF00108 Thiolase, N-terminal domain 5 253 4.8E-55 T 12-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 JDM601_3694 0863c46d5c7bd4f9f1d05ad28369fad4 383 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 381 1.9E-111 T 12-10-2018 IPR002155 Thiolase GO:0016747 JDM601_3694 0863c46d5c7bd4f9f1d05ad28369fad4 383 Gene3D G3DSA:3.40.47.10 6 266 4.7E-127 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 JDM601_3694 0863c46d5c7bd4f9f1d05ad28369fad4 383 SUPERFAMILY SSF53901 261 382 6.17E-37 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 JDM601_3681 c7d6dfb4c9428acb834473b554548bec 261 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 103 257 7.2E-11 T 12-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 JDM601_3681 c7d6dfb4c9428acb834473b554548bec 261 SUPERFAMILY SSF56529 3 260 8.5E-78 T 12-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 JDM601_3681 c7d6dfb4c9428acb834473b554548bec 261 Gene3D G3DSA:3.90.850.10 1 260 1.4E-85 T 12-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 JDM601_2300 21015dc998c6b87aff5f3f04f6e5d166 317 Gene3D G3DSA:3.40.50.1820 15 311 1.9E-87 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_2300 21015dc998c6b87aff5f3f04f6e5d166 317 ProSitePatterns PS01174 Lipolytic enzymes "G-D-X-G" family, putative serine active site. 152 164 - T 12-10-2018 IPR033140 Lipase, GDXG, putative serine active site JDM601_2300 21015dc998c6b87aff5f3f04f6e5d166 317 SUPERFAMILY SSF53474 44 302 1.96E-69 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_2300 21015dc998c6b87aff5f3f04f6e5d166 317 Pfam PF07859 alpha/beta hydrolase fold 80 287 1.7E-71 T 12-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 JDM601_2300 21015dc998c6b87aff5f3f04f6e5d166 317 ProSitePatterns PS01173 Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 80 96 - T 12-10-2018 IPR002168 Lipase, GDXG, putative histidine active site GO:0016787 Reactome: R-HSA-163560 JDM601_0827 37a54ac944df9f9534b381e144ba6f7e 283 SUPERFAMILY SSF103481 192 281 8.76E-11 T 12-10-2018 JDM601_0827 37a54ac944df9f9534b381e144ba6f7e 283 Pfam PF00892 EamA-like transporter family 152 281 1.3E-11 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 JDM601_0827 37a54ac944df9f9534b381e144ba6f7e 283 Pfam PF00892 EamA-like transporter family 10 136 1.4E-6 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 JDM601_0827 37a54ac944df9f9534b381e144ba6f7e 283 SUPERFAMILY SSF103481 45 139 1.96E-6 T 12-10-2018 JDM601_3765 6b89c252b0fdcf8d1ee18bcf9f626529 289 Gene3D G3DSA:3.90.226.10 4 289 1.9E-61 T 12-10-2018 JDM601_3765 6b89c252b0fdcf8d1ee18bcf9f626529 289 Pfam PF00378 Enoyl-CoA hydratase/isomerase 16 256 1.3E-25 T 12-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 JDM601_3765 6b89c252b0fdcf8d1ee18bcf9f626529 289 SUPERFAMILY SSF52096 4 249 1.37E-47 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily JDM601_0896 63934bbaf8ea9f455457475eef99f60e 341 Pfam PF01551 Peptidase family M23 235 329 6.1E-31 T 12-10-2018 IPR016047 Peptidase M23 JDM601_0896 63934bbaf8ea9f455457475eef99f60e 341 Gene3D G3DSA:2.70.70.10 178 336 2.0E-43 T 12-10-2018 IPR011055 Duplicated hybrid motif JDM601_0896 63934bbaf8ea9f455457475eef99f60e 341 SUPERFAMILY SSF51261 165 333 1.2E-48 T 12-10-2018 IPR011055 Duplicated hybrid motif JDM601_1232 769c0a9837dbee9c82571e5a7a75e788 145 ProSitePatterns PS00892 HIT domain signature. 83 101 - T 12-10-2018 IPR019808 Histidine triad, conserved site JDM601_1232 769c0a9837dbee9c82571e5a7a75e788 145 PRINTS PR00332 Histidine triad family signature 22 40 1.5E-15 T 12-10-2018 IPR001310 Histidine triad (HIT) protein JDM601_1232 769c0a9837dbee9c82571e5a7a75e788 145 PRINTS PR00332 Histidine triad family signature 90 100 1.5E-15 T 12-10-2018 IPR001310 Histidine triad (HIT) protein JDM601_1232 769c0a9837dbee9c82571e5a7a75e788 145 PRINTS PR00332 Histidine triad family signature 1 17 1.5E-15 T 12-10-2018 IPR001310 Histidine triad (HIT) protein JDM601_1232 769c0a9837dbee9c82571e5a7a75e788 145 Gene3D G3DSA:3.30.428.10 1 145 3.7E-41 T 12-10-2018 IPR036265 HIT-like superfamily JDM601_1232 769c0a9837dbee9c82571e5a7a75e788 145 Pfam PF01230 HIT domain 9 103 4.5E-25 T 12-10-2018 IPR001310 Histidine triad (HIT) protein JDM601_1232 769c0a9837dbee9c82571e5a7a75e788 145 SUPERFAMILY SSF54197 1 112 1.12E-31 T 12-10-2018 IPR036265 HIT-like superfamily JDM601_1732 16bdfe8a99697a7a577317ffd820a732 207 Pfam PF00583 Acetyltransferase (GNAT) family 72 165 4.2E-5 T 12-10-2018 IPR000182 GNAT domain JDM601_1732 16bdfe8a99697a7a577317ffd820a732 207 Gene3D G3DSA:3.40.630.30 8 176 1.1E-10 T 12-10-2018 JDM601_1732 16bdfe8a99697a7a577317ffd820a732 207 SUPERFAMILY SSF55729 18 197 8.92E-11 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase JDM601_3148 9ca0b7b4519a98b7a26cfc896ef11201 192 Pfam PF02627 Carboxymuconolactone decarboxylase family 51 127 3.3E-6 T 12-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 JDM601_3148 9ca0b7b4519a98b7a26cfc896ef11201 192 SUPERFAMILY SSF69118 4 178 4.32E-43 T 12-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 JDM601_3148 9ca0b7b4519a98b7a26cfc896ef11201 192 Gene3D G3DSA:1.20.1290.10 19 180 2.9E-32 T 12-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 JDM601_1665 d9d5687142205107dd286561befab044 244 Pfam PF02591 C4-type zinc ribbon domain 204 237 2.6E-8 T 12-10-2018 IPR003743 C4-type zinc ribbon domain JDM601_3055 21c665fb07388c68c5aac3f0b964b480 137 Gene3D G3DSA:1.10.1740.70 10 70 8.7E-7 T 12-10-2018 JDM601_3055 21c665fb07388c68c5aac3f0b964b480 137 Pfam PF07498 Rho termination factor, N-terminal domain 103 129 5.9E-6 T 12-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 JDM601_3055 21c665fb07388c68c5aac3f0b964b480 137 Pfam PF06150 ChaB 15 69 1.4E-18 T 12-10-2018 IPR009317 ChaB JDM601_3055 21c665fb07388c68c5aac3f0b964b480 137 SUPERFAMILY SSF140376 12 70 2.09E-16 T 12-10-2018 IPR037205 ChaB superfamily JDM601_2524 eb29ce8572d7c486f27056b5eb0f2c3f 151 Gene3D G3DSA:3.40.50.360 2 150 4.7E-15 T 12-10-2018 IPR029039 Flavoprotein-like superfamily JDM601_2524 eb29ce8572d7c486f27056b5eb0f2c3f 151 SUPERFAMILY SSF52218 4 150 3.42E-24 T 12-10-2018 IPR029039 Flavoprotein-like superfamily JDM601_2870 271a605b6f4cc115694f57b1793b29b9 645 TIGRFAM TIGR01974 NDH_I_L: proton-translocating NADH-quinone oxidoreductase, chain L 7 640 2.6E-226 T 12-10-2018 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 JDM601_2870 271a605b6f4cc115694f57b1793b29b9 645 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 424 446 9.5E-13 T 12-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 JDM601_2870 271a605b6f4cc115694f57b1793b29b9 645 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 63 87 9.5E-13 T 12-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 JDM601_2870 271a605b6f4cc115694f57b1793b29b9 645 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 89 109 9.5E-13 T 12-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 JDM601_2870 271a605b6f4cc115694f57b1793b29b9 645 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 268 290 9.5E-13 T 12-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 JDM601_2870 271a605b6f4cc115694f57b1793b29b9 645 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 515 536 9.5E-13 T 12-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 JDM601_2870 271a605b6f4cc115694f57b1793b29b9 645 Pfam PF00361 Proton-conducting membrane transporter 138 423 1.1E-84 T 12-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 JDM601_2870 271a605b6f4cc115694f57b1793b29b9 645 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 69 126 1.5E-24 T 12-10-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 JDM601_2870 271a605b6f4cc115694f57b1793b29b9 645 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 162 183 2.8E-62 T 12-10-2018 JDM601_2870 271a605b6f4cc115694f57b1793b29b9 645 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 250 276 2.8E-62 T 12-10-2018 JDM601_2870 271a605b6f4cc115694f57b1793b29b9 645 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 425 444 2.8E-62 T 12-10-2018 JDM601_2870 271a605b6f4cc115694f57b1793b29b9 645 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 87 112 2.8E-62 T 12-10-2018 JDM601_2870 271a605b6f4cc115694f57b1793b29b9 645 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 115 135 2.8E-62 T 12-10-2018 JDM601_2870 271a605b6f4cc115694f57b1793b29b9 645 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 228 249 2.8E-62 T 12-10-2018 JDM601_2870 271a605b6f4cc115694f57b1793b29b9 645 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 318 330 2.8E-62 T 12-10-2018 JDM601_2934 ae3dcb2f73f939405679e89f5c72577e 77 SUPERFAMILY SSF51230 9 76 1.27E-17 T 12-10-2018 IPR011053 Single hybrid motif JDM601_2934 ae3dcb2f73f939405679e89f5c72577e 77 Gene3D G3DSA:2.40.50.100 10 77 3.3E-19 T 12-10-2018 JDM601_2934 ae3dcb2f73f939405679e89f5c72577e 77 Pfam PF00364 Biotin-requiring enzyme 16 76 4.3E-16 T 12-10-2018 IPR000089 Biotin/lipoyl attachment JDM601_0986 88f9507f5efc3213ac0f5d4cf0d5f9f4 462 Pfam PF10039 Predicted integral membrane protein (DUF2275) 68 219 1.7E-17 T 12-10-2018 IPR018734 Domain of unknown function DUF2275 JDM601_0986 88f9507f5efc3213ac0f5d4cf0d5f9f4 462 Pfam PF04542 Sigma-70 region 2 307 371 4.1E-14 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 JDM601_0986 88f9507f5efc3213ac0f5d4cf0d5f9f4 462 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 327 358 - T 12-10-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 JDM601_0986 88f9507f5efc3213ac0f5d4cf0d5f9f4 462 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 302 451 2.5E-22 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 JDM601_0986 88f9507f5efc3213ac0f5d4cf0d5f9f4 462 Gene3D G3DSA:1.10.10.10 393 462 1.2E-20 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JDM601_0986 88f9507f5efc3213ac0f5d4cf0d5f9f4 462 Pfam PF08281 Sigma-70, region 4 401 451 1.3E-14 T 12-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 JDM601_0986 88f9507f5efc3213ac0f5d4cf0d5f9f4 462 Pfam PF13490 Putative zinc-finger 9 43 1.2E-7 T 12-10-2018 IPR027383 Putative zinc-finger JDM601_0986 88f9507f5efc3213ac0f5d4cf0d5f9f4 462 SUPERFAMILY SSF88659 396 452 4.58E-13 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like JDM601_0986 88f9507f5efc3213ac0f5d4cf0d5f9f4 462 SUPERFAMILY SSF88946 284 383 9.81E-22 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 JDM601_0986 88f9507f5efc3213ac0f5d4cf0d5f9f4 462 Gene3D G3DSA:1.10.1740.10 279 368 3.5E-33 T 12-10-2018 JDM601_2157 50548c129e05b9a56d0f92b807f75020 332 Hamap MF_01694 Biotin synthase [bioB]. 18 326 38.055 T 12-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 JDM601_2157 50548c129e05b9a56d0f92b807f75020 332 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 233 321 5.3E-12 T 12-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 JDM601_2157 50548c129e05b9a56d0f92b807f75020 332 SMART SM00729 58 265 1.9E-36 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 JDM601_2157 50548c129e05b9a56d0f92b807f75020 332 SMART SM00876 233 325 2.1E-28 T 12-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 JDM601_2157 50548c129e05b9a56d0f92b807f75020 332 Gene3D G3DSA:3.20.20.70 23 326 1.5E-97 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JDM601_2157 50548c129e05b9a56d0f92b807f75020 332 SUPERFAMILY SSF102114 20 311 1.83E-65 T 12-10-2018 JDM601_2157 50548c129e05b9a56d0f92b807f75020 332 PIRSF PIRSF001619 2 331 3.9E-105 T 12-10-2018 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 JDM601_2157 50548c129e05b9a56d0f92b807f75020 332 TIGRFAM TIGR00433 bioB: biotin synthase 30 323 1.5E-106 T 12-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 JDM601_2157 50548c129e05b9a56d0f92b807f75020 332 Pfam PF04055 Radical SAM superfamily 65 222 2.4E-14 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 JDM601_2673 d6d2015f4f7ced375ff5a92fafcc2a0b 340 Gene3D G3DSA:3.40.50.1820 22 337 5.3E-86 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_2673 d6d2015f4f7ced375ff5a92fafcc2a0b 340 SUPERFAMILY SSF53474 67 336 1.57E-67 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_2673 d6d2015f4f7ced375ff5a92fafcc2a0b 340 Pfam PF07859 alpha/beta hydrolase fold 106 313 4.5E-73 T 12-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 JDM601_1862 c81bdc92c4bd002d0443cb6ac4aa8631 254 TIGRFAM TIGR00281 TIGR00281: segregation and condensation protein B 51 212 1.5E-29 T 12-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 JDM601_1862 c81bdc92c4bd002d0443cb6ac4aa8631 254 Gene3D G3DSA:1.10.10.10 37 127 2.7E-32 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JDM601_1862 c81bdc92c4bd002d0443cb6ac4aa8631 254 SUPERFAMILY SSF46785 46 125 3.77E-16 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JDM601_1862 c81bdc92c4bd002d0443cb6ac4aa8631 254 Pfam PF04079 Segregation and condensation complex subunit ScpB 54 210 8.7E-49 T 12-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 JDM601_1862 c81bdc92c4bd002d0443cb6ac4aa8631 254 SUPERFAMILY SSF46785 130 202 4.42E-18 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JDM601_1862 c81bdc92c4bd002d0443cb6ac4aa8631 254 PIRSF PIRSF019345 38 249 7.1E-61 T 12-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 JDM601_1862 c81bdc92c4bd002d0443cb6ac4aa8631 254 Gene3D G3DSA:1.10.10.10 128 220 2.4E-30 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JDM601_3194 bd60f4ba7e318bfcbe4aa67382a88e49 285 SUPERFAMILY SSF51735 125 282 9.99E-41 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_3194 bd60f4ba7e318bfcbe4aa67382a88e49 285 SUPERFAMILY SSF53223 6 124 6.33E-33 T 12-10-2018 JDM601_3194 bd60f4ba7e318bfcbe4aa67382a88e49 285 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 126 282 9.5E-59 T 12-10-2018 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0004488 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 JDM601_3194 bd60f4ba7e318bfcbe4aa67382a88e49 285 Gene3D G3DSA:3.40.50.720 9 261 1.2E-105 T 12-10-2018 JDM601_3194 bd60f4ba7e318bfcbe4aa67382a88e49 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 112 133 6.1E-60 T 12-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 JDM601_3194 bd60f4ba7e318bfcbe4aa67382a88e49 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 258 276 6.1E-60 T 12-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 JDM601_3194 bd60f4ba7e318bfcbe4aa67382a88e49 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 157 177 6.1E-60 T 12-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 JDM601_3194 bd60f4ba7e318bfcbe4aa67382a88e49 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 77 104 6.1E-60 T 12-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 JDM601_3194 bd60f4ba7e318bfcbe4aa67382a88e49 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 36 58 6.1E-60 T 12-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 JDM601_3194 bd60f4ba7e318bfcbe4aa67382a88e49 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 208 237 6.1E-60 T 12-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 JDM601_3194 bd60f4ba7e318bfcbe4aa67382a88e49 285 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 9 123 2.1E-32 T 12-10-2018 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 JDM601_3194 bd60f4ba7e318bfcbe4aa67382a88e49 285 Gene3D G3DSA:3.40.50.10860 11 279 1.2E-105 T 12-10-2018 JDM601_3194 bd60f4ba7e318bfcbe4aa67382a88e49 285 Hamap MF_01576 Bifunctional protein FolD [folD]. 6 285 35.127 T 12-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 JDM601_1474 d62f4ce9d1a3ba3dac9061fdb842a456 282 Hamap MF_01967 NAD-dependent protein deacetylase [cobB]. 2 272 61.628 T 12-10-2018 IPR026587 Sirtuin, class II Reactome: R-HSA-2151201 JDM601_1474 d62f4ce9d1a3ba3dac9061fdb842a456 282 Pfam PF02146 Sir2 family 25 227 8.7E-41 T 12-10-2018 IPR003000 Sirtuin family GO:0070403 JDM601_1474 d62f4ce9d1a3ba3dac9061fdb842a456 282 SUPERFAMILY SSF52467 16 276 8.88E-73 T 12-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily JDM601_1474 d62f4ce9d1a3ba3dac9061fdb842a456 282 Gene3D G3DSA:3.40.50.1220 18 266 3.9E-72 T 12-10-2018 JDM601_1474 d62f4ce9d1a3ba3dac9061fdb842a456 282 Gene3D G3DSA:3.30.1600.10 34 197 3.9E-72 T 12-10-2018 IPR026591 Sirtuin, catalytic core small domain superfamily JDM601_1147 41d289983d4ad8e4b2b850fca865ca21 409 Pfam PF09594 Glycosyltransferase family 87 82 317 9.6E-52 T 12-10-2018 IPR018584 Glycosyltransferase family 87 GO:0016758 JDM601_0184 0de2933d05e5f5e9787a07e4b8881440 351 SUPERFAMILY SSF56645 5 197 4.58E-36 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 JDM601_0184 0de2933d05e5f5e9787a07e4b8881440 351 Gene3D G3DSA:1.10.540.10 3 101 6.3E-23 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 JDM601_0184 0de2933d05e5f5e9787a07e4b8881440 351 Gene3D G3DSA:1.20.140.10 212 350 2.7E-33 T 12-10-2018 JDM601_0184 0de2933d05e5f5e9787a07e4b8881440 351 SUPERFAMILY SSF47203 198 349 9.83E-35 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 JDM601_0184 0de2933d05e5f5e9787a07e4b8881440 351 Gene3D G3DSA:2.40.110.10 106 206 9.3E-13 T 12-10-2018 JDM601_0184 0de2933d05e5f5e9787a07e4b8881440 351 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 23 100 3.6E-16 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 JDM601_0184 0de2933d05e5f5e9787a07e4b8881440 351 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 202 346 3.4E-25 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 JDM601_3395 2594c0c602db7ac5ce3b28b0bc78c8a0 250 Gene3D G3DSA:1.10.357.10 80 233 1.8E-26 T 12-10-2018 JDM601_3395 2594c0c602db7ac5ce3b28b0bc78c8a0 250 Gene3D G3DSA:1.10.10.60 5 79 4.5E-18 T 12-10-2018 JDM601_3395 2594c0c602db7ac5ce3b28b0bc78c8a0 250 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 23 36 9.8E-5 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_3395 2594c0c602db7ac5ce3b28b0bc78c8a0 250 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 44 67 9.8E-5 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_3395 2594c0c602db7ac5ce3b28b0bc78c8a0 250 SUPERFAMILY SSF48498 83 235 1.89E-22 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily JDM601_3395 2594c0c602db7ac5ce3b28b0bc78c8a0 250 Pfam PF02909 Tetracyclin repressor, C-terminal all-alpha domain 86 229 2.7E-11 T 12-10-2018 IPR004111 Tetracycline transcriptional regulator, TetR, C-terminal GO:0045892 JDM601_3395 2594c0c602db7ac5ce3b28b0bc78c8a0 250 SUPERFAMILY SSF46689 12 77 4.39E-12 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JDM601_3395 2594c0c602db7ac5ce3b28b0bc78c8a0 250 ProSitePatterns PS01081 TetR-type HTH domain signature. 35 66 - T 12-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site JDM601_3395 2594c0c602db7ac5ce3b28b0bc78c8a0 250 Pfam PF00440 Bacterial regulatory proteins, tetR family 23 69 1.4E-12 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_1751 ed7a3a1ef6ffea0de79a0b5714ba5b1c 266 TIGRFAM TIGR03544 DivI1A_domain: DivIVA domain 3 39 5.8E-15 T 12-10-2018 IPR019933 DivIVA domain JDM601_1751 ed7a3a1ef6ffea0de79a0b5714ba5b1c 266 Pfam PF05103 DivIVA protein 3 63 5.6E-12 T 12-10-2018 IPR007793 DivIVA family JDM601_1751 ed7a3a1ef6ffea0de79a0b5714ba5b1c 266 SUPERFAMILY SSF58113 114 241 3.01E-7 T 12-10-2018 JDM601_2709 37b70094b5813bd5df0e92b3e0070576 208 SUPERFAMILY SSF54427 28 208 2.36E-45 T 12-10-2018 IPR032710 NTF2-like domain superfamily JDM601_2709 37b70094b5813bd5df0e92b3e0070576 208 Gene3D G3DSA:3.10.450.50 35 208 9.3E-54 T 12-10-2018 JDM601_2709 37b70094b5813bd5df0e92b3e0070576 208 Pfam PF00866 Ring hydroxylating beta subunit 58 200 4.9E-41 T 12-10-2018 IPR000391 Ring-hydroxylating dioxygenase beta subunit GO:0006725|GO:0055114 JDM601_1825 bc6a1636a0f53bf6bf0efc6b6af11195 301 Gene3D G3DSA:3.30.70.1230 87 279 4.8E-37 T 12-10-2018 IPR029787 Nucleotide cyclase JDM601_1825 bc6a1636a0f53bf6bf0efc6b6af11195 301 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 120 255 8.9E-9 T 12-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 JDM601_1825 bc6a1636a0f53bf6bf0efc6b6af11195 301 SMART SM00044 76 263 6.4E-15 T 12-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 JDM601_1825 bc6a1636a0f53bf6bf0efc6b6af11195 301 SUPERFAMILY SSF55073 116 265 1.57E-35 T 12-10-2018 IPR029787 Nucleotide cyclase JDM601_0170 0633b97712d32f17cbbf1dd9e42ea013 227 Pfam PF01936 NYN domain 24 187 5.4E-6 T 12-10-2018 IPR021139 NYN domain, limkain-b1-type JDM601_3102 3458c359ade52f10ead87916ce6983a1 502 Pfam PF00355 Rieske [2Fe-2S] domain 454 497 1.1E-5 T 12-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 JDM601_3102 3458c359ade52f10ead87916ce6983a1 502 Pfam PF01266 FAD dependent oxidoreductase 27 371 1.5E-36 T 12-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 JDM601_3102 3458c359ade52f10ead87916ce6983a1 502 Gene3D G3DSA:3.30.9.10 118 332 7.2E-46 T 12-10-2018 JDM601_3102 3458c359ade52f10ead87916ce6983a1 502 SUPERFAMILY SSF51905 26 393 4.4E-36 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_3102 3458c359ade52f10ead87916ce6983a1 502 Gene3D G3DSA:3.50.50.60 27 371 7.2E-46 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_3102 3458c359ade52f10ead87916ce6983a1 502 SUPERFAMILY SSF50022 424 499 5.11E-16 T 12-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 JDM601_3102 3458c359ade52f10ead87916ce6983a1 502 Gene3D G3DSA:2.102.10.10 431 500 2.3E-16 T 12-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 JDM601_3952 c165f37e6b150c8d9fed47d2d0584a64 248 Pfam PF00633 Helix-hairpin-helix motif 113 140 1.2E-9 T 12-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 JDM601_3952 c165f37e6b150c8d9fed47d2d0584a64 248 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 201 217 - T 12-10-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 JDM601_3952 c165f37e6b150c8d9fed47d2d0584a64 248 Hamap MF_00942 Endonuclease III [nth]. 10 223 36.571 T 12-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 JDM601_3952 c165f37e6b150c8d9fed47d2d0584a64 248 PIRSF PIRSF001435 15 225 1.0E-43 T 12-10-2018 JDM601_3952 c165f37e6b150c8d9fed47d2d0584a64 248 TIGRFAM TIGR01083 nth: endonuclease III 19 208 5.0E-78 T 12-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 JDM601_3952 c165f37e6b150c8d9fed47d2d0584a64 248 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 48 182 1.6E-21 T 12-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 JDM601_3952 c165f37e6b150c8d9fed47d2d0584a64 248 SUPERFAMILY SSF48150 18 221 9.11E-64 T 12-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 JDM601_3952 c165f37e6b150c8d9fed47d2d0584a64 248 Gene3D G3DSA:1.10.1670.10 29 217 3.0E-72 T 12-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 JDM601_3952 c165f37e6b150c8d9fed47d2d0584a64 248 Gene3D G3DSA:1.10.340.30 35 146 3.0E-72 T 12-10-2018 JDM601_3952 c165f37e6b150c8d9fed47d2d0584a64 248 ProSitePatterns PS01155 Endonuclease III family signature. 116 145 - T 12-10-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 JDM601_3952 c165f37e6b150c8d9fed47d2d0584a64 248 SMART SM00525 200 220 6.1E-4 T 12-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 JDM601_3952 c165f37e6b150c8d9fed47d2d0584a64 248 SMART SM00478 52 199 3.7E-58 T 12-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 JDM601_2684 ba700837526ca6be2ad0165087b4243a 363 Pfam PF01820 D-ala D-ala ligase N-terminus 1 129 9.9E-31 T 12-10-2018 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 JDM601_2684 ba700837526ca6be2ad0165087b4243a 363 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 1 355 5.3E-110 T 12-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 JDM601_2684 ba700837526ca6be2ad0165087b4243a 363 Pfam PF07478 D-ala D-ala ligase C-terminus 147 352 5.1E-68 T 12-10-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 JDM601_2684 ba700837526ca6be2ad0165087b4243a 363 Gene3D G3DSA:3.30.1490.20 156 221 7.3E-115 T 12-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 JDM601_2684 ba700837526ca6be2ad0165087b4243a 363 SUPERFAMILY SSF56059 140 353 1.45E-52 T 12-10-2018 JDM601_2684 ba700837526ca6be2ad0165087b4243a 363 SUPERFAMILY SSF52440 1 139 4.89E-34 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily JDM601_2684 ba700837526ca6be2ad0165087b4243a 363 Gene3D G3DSA:3.40.50.20 14 352 7.3E-115 T 12-10-2018 JDM601_2684 ba700837526ca6be2ad0165087b4243a 363 Gene3D G3DSA:3.30.470.20 129 346 7.3E-115 T 12-10-2018 JDM601_2684 ba700837526ca6be2ad0165087b4243a 363 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 299 326 - T 12-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 JDM601_2684 ba700837526ca6be2ad0165087b4243a 363 PIRSF PIRSF039102 1 360 1.8E-104 T 12-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 JDM601_2684 ba700837526ca6be2ad0165087b4243a 363 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 107 118 - T 12-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 JDM601_2684 ba700837526ca6be2ad0165087b4243a 363 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 1 356 39.056 T 12-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 JDM601_0004 8609b58e4998070e29015308835ff319 188 Hamap MF_00630 UPF0232 protein . 4 175 33.065 T 12-10-2018 IPR023007 Uncharacterised protein family UPF0232, actinobacteria JDM601_0004 8609b58e4998070e29015308835ff319 188 Pfam PF05258 Protein of unknown function (DUF721) 77 163 2.5E-23 T 12-10-2018 IPR007922 Protein of unknown function DUF721/UPF0232 JDM601_3684 18e2efa53e0cef5c19e54c9539cd7254 286 SUPERFAMILY SSF54637 9 160 2.05E-38 T 12-10-2018 IPR029069 HotDog domain superfamily JDM601_3684 18e2efa53e0cef5c19e54c9539cd7254 286 Pfam PF01575 MaoC like domain 162 262 3.0E-29 T 12-10-2018 IPR002539 MaoC-like dehydratase domain JDM601_3684 18e2efa53e0cef5c19e54c9539cd7254 286 Pfam PF13452 N-terminal half of MaoC dehydratase 7 139 1.9E-14 T 12-10-2018 IPR039569 N-terminal of MaoC-like dehydratase Reactome: R-HSA-193368|Reactome: R-HSA-2046106|Reactome: R-HSA-389887|Reactome: R-HSA-390247|Reactome: R-HSA-9033241|Reactome: R-HSA-9033500 JDM601_3684 18e2efa53e0cef5c19e54c9539cd7254 286 Gene3D G3DSA:3.10.129.10 13 284 4.7E-81 T 12-10-2018 JDM601_3684 18e2efa53e0cef5c19e54c9539cd7254 286 SUPERFAMILY SSF54637 163 277 9.06E-30 T 12-10-2018 IPR029069 HotDog domain superfamily JDM601_2570 12a0f7a6a1b4559c75748df201a047a8 485 Gene3D G3DSA:1.20.1250.20 251 477 2.0E-8 T 12-10-2018 JDM601_2570 12a0f7a6a1b4559c75748df201a047a8 485 Gene3D G3DSA:1.20.1720.10 11 243 3.4E-43 T 12-10-2018 JDM601_2570 12a0f7a6a1b4559c75748df201a047a8 485 SUPERFAMILY SSF103473 3 469 4.71E-54 T 12-10-2018 IPR036259 MFS transporter superfamily JDM601_2570 12a0f7a6a1b4559c75748df201a047a8 485 Pfam PF07690 Major Facilitator Superfamily 17 404 8.2E-44 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 JDM601_0502 a63b1d90146b7899971d588566d619e4 149 Pfam PF13577 SnoaL-like domain 8 129 4.0E-19 T 12-10-2018 IPR037401 SnoaL-like domain JDM601_0502 a63b1d90146b7899971d588566d619e4 149 SUPERFAMILY SSF54427 8 140 3.88E-26 T 12-10-2018 IPR032710 NTF2-like domain superfamily JDM601_0502 a63b1d90146b7899971d588566d619e4 149 Gene3D G3DSA:3.10.450.50 5 143 8.9E-26 T 12-10-2018 JDM601_2984 710e05f6b9bd20d62be471dd25d604c3 574 Pfam PF10647 Lipoprotein LpqB beta-propeller domain 316 573 6.8E-74 T 12-10-2018 IPR018910 Lipoprotein LpqB, beta-propeller domain, C-terminal JDM601_2984 710e05f6b9bd20d62be471dd25d604c3 574 Pfam PF10646 Sporulation and spore germination 162 282 1.2E-12 T 12-10-2018 IPR019606 GerMN domain JDM601_2984 710e05f6b9bd20d62be471dd25d604c3 574 SUPERFAMILY SSF69304 315 513 7.72E-6 T 12-10-2018 JDM601_2984 710e05f6b9bd20d62be471dd25d604c3 574 Hamap MF_01373 Lipoprotein LpqB [lpqB]. 1 574 23.371 T 12-10-2018 IPR023959 Lipoprotein LpqB JDM601_2984 710e05f6b9bd20d62be471dd25d604c3 574 SMART SM00909 189 286 5.5E-13 T 12-10-2018 IPR019606 GerMN domain JDM601_3430 aa726061f37834ce4489a0c79c5b527d 401 PRINTS PR00385 P450 superfamily signature 240 257 8.8E-7 T 12-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_3430 aa726061f37834ce4489a0c79c5b527d 401 PRINTS PR00385 P450 superfamily signature 351 362 8.8E-7 T 12-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_3430 aa726061f37834ce4489a0c79c5b527d 401 PRINTS PR00385 P450 superfamily signature 342 351 8.8E-7 T 12-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_3430 aa726061f37834ce4489a0c79c5b527d 401 PRINTS PR00385 P450 superfamily signature 275 286 8.8E-7 T 12-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_3430 aa726061f37834ce4489a0c79c5b527d 401 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 344 353 - T 12-10-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 JDM601_3430 aa726061f37834ce4489a0c79c5b527d 401 Gene3D G3DSA:1.10.630.10 2 401 5.1E-118 T 12-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_3430 aa726061f37834ce4489a0c79c5b527d 401 SUPERFAMILY SSF48264 13 399 1.57E-85 T 12-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_3430 aa726061f37834ce4489a0c79c5b527d 401 Pfam PF00067 Cytochrome P450 202 377 3.4E-21 T 12-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_3430 aa726061f37834ce4489a0c79c5b527d 401 PRINTS PR00359 B-class P450 signature 292 319 4.2E-35 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3430 aa726061f37834ce4489a0c79c5b527d 401 PRINTS PR00359 B-class P450 signature 275 286 4.2E-35 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3430 aa726061f37834ce4489a0c79c5b527d 401 PRINTS PR00359 B-class P450 signature 150 165 4.2E-35 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3430 aa726061f37834ce4489a0c79c5b527d 401 PRINTS PR00359 B-class P450 signature 189 211 4.2E-35 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3430 aa726061f37834ce4489a0c79c5b527d 401 PRINTS PR00359 B-class P450 signature 342 351 4.2E-35 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3430 aa726061f37834ce4489a0c79c5b527d 401 PRINTS PR00359 B-class P450 signature 133 149 4.2E-35 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3430 aa726061f37834ce4489a0c79c5b527d 401 PRINTS PR00359 B-class P450 signature 351 362 4.2E-35 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3430 aa726061f37834ce4489a0c79c5b527d 401 PRINTS PR00359 B-class P450 signature 87 98 4.2E-35 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_2591 897f2181bb290b4e5c60c6b794d52809 124 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 3 115 6.3E-5 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain JDM601_2591 897f2181bb290b4e5c60c6b794d52809 124 Gene3D G3DSA:3.10.180.10 8 117 6.9E-15 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase JDM601_2591 897f2181bb290b4e5c60c6b794d52809 124 SUPERFAMILY SSF54593 2 117 1.75E-18 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase JDM601_0327 9382d9b3051d2d37a51a3d009a66940f 288 Pfam PF00483 Nucleotidyl transferase 3 234 9.8E-64 T 12-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 JDM601_0327 9382d9b3051d2d37a51a3d009a66940f 288 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 2 286 3.2E-144 T 12-10-2018 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|KEGG: 00525+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 JDM601_0327 9382d9b3051d2d37a51a3d009a66940f 288 SUPERFAMILY SSF53448 1 285 5.63E-82 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases JDM601_0327 9382d9b3051d2d37a51a3d009a66940f 288 Gene3D G3DSA:3.90.550.10 1 288 7.4E-77 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases JDM601_0459 d76620ed5048fcae68d348c4d6ee02bb 284 PIRSF PIRSF000105 1 284 1.7E-80 T 12-10-2018 IPR022694 3-hydroxyacyl-CoA dehydrogenase GO:0003857|GO:0006631|GO:0055114|GO:0070403 JDM601_0459 d76620ed5048fcae68d348c4d6ee02bb 284 SUPERFAMILY SSF48179 188 284 8.25E-29 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 JDM601_0459 d76620ed5048fcae68d348c4d6ee02bb 284 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 188 284 2.4E-32 T 12-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 JDM601_0459 d76620ed5048fcae68d348c4d6ee02bb 284 SUPERFAMILY SSF51735 2 185 4.96E-50 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_0459 d76620ed5048fcae68d348c4d6ee02bb 284 Gene3D G3DSA:1.10.1040.10 190 284 7.2E-31 T 12-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 JDM601_0459 d76620ed5048fcae68d348c4d6ee02bb 284 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 6 185 1.1E-57 T 12-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 JDM601_0459 d76620ed5048fcae68d348c4d6ee02bb 284 Gene3D G3DSA:3.40.50.720 1 189 3.5E-60 T 12-10-2018 JDM601_1201 e7b43f039e73231604f2042900f1247d 173 Pfam PF06210 Protein of unknown function (DUF1003) 39 140 6.6E-37 T 12-10-2018 IPR010406 Protein of unknown function DUF1003 JDM601_1875 70750a9a5633015ce4bba5abd96823ba 229 SUPERFAMILY SSF52317 1 227 2.46E-69 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like JDM601_1875 70750a9a5633015ce4bba5abd96823ba 229 Gene3D G3DSA:3.40.50.880 2 227 7.9E-70 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like JDM601_1875 70750a9a5633015ce4bba5abd96823ba 229 Pfam PF01965 DJ-1/PfpI family 27 224 6.3E-15 T 12-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 JDM601_2845 8fb57b4630b9d6c58b70dc4b09d00dd1 371 Gene3D G3DSA:1.20.58.410 4 117 2.1E-26 T 12-10-2018 JDM601_2845 8fb57b4630b9d6c58b70dc4b09d00dd1 371 SMART SM00937 83 196 7.2E-46 T 12-10-2018 IPR005139 Peptide chain release factor GO:0006415 JDM601_2845 8fb57b4630b9d6c58b70dc4b09d00dd1 371 TIGRFAM TIGR00020 prfB: peptide chain release factor 2 3 366 2.7E-166 T 12-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 JDM601_2845 8fb57b4630b9d6c58b70dc4b09d00dd1 371 SUPERFAMILY SSF75620 28 366 8.89E-120 T 12-10-2018 JDM601_2845 8fb57b4630b9d6c58b70dc4b09d00dd1 371 Pfam PF03462 PCRF domain 29 221 1.5E-55 T 12-10-2018 IPR005139 Peptide chain release factor GO:0006415 JDM601_2845 8fb57b4630b9d6c58b70dc4b09d00dd1 371 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 246 262 - T 12-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 JDM601_2845 8fb57b4630b9d6c58b70dc4b09d00dd1 371 Gene3D G3DSA:3.30.70.1660 131 359 4.0E-88 T 12-10-2018 JDM601_2845 8fb57b4630b9d6c58b70dc4b09d00dd1 371 Pfam PF00472 RF-1 domain 231 338 7.5E-36 T 12-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 JDM601_2845 8fb57b4630b9d6c58b70dc4b09d00dd1 371 Hamap MF_00094 Peptide chain release factor 2 [prfB]. 1 366 37.769 T 12-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 JDM601_2845 8fb57b4630b9d6c58b70dc4b09d00dd1 371 Gene3D G3DSA:3.30.160.20 227 321 4.0E-88 T 12-10-2018 JDM601_2164 f209d3e90f17a59ecb3c00d0c6cb8b93 209 Pfam PF00877 NlpC/P60 family 118 207 7.3E-21 T 12-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain JDM601_2164 f209d3e90f17a59ecb3c00d0c6cb8b93 209 SUPERFAMILY SSF54001 35 196 2.84E-24 T 12-10-2018 IPR038765 Papain-like cysteine peptidase superfamily JDM601_3884 b3d7ec197334b0240c5a4d80bde86726 434 Pfam PF13354 Beta-lactamase enzyme family 162 372 5.0E-26 T 12-10-2018 JDM601_3884 b3d7ec197334b0240c5a4d80bde86726 434 SUPERFAMILY SSF56601 33 429 2.96E-40 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like JDM601_3884 b3d7ec197334b0240c5a4d80bde86726 434 Gene3D G3DSA:3.40.710.10 133 403 7.9E-93 T 12-10-2018 JDM601_3884 b3d7ec197334b0240c5a4d80bde86726 434 Gene3D G3DSA:1.10.8.620 274 327 7.9E-93 T 12-10-2018 JDM601_2048 094d3fe340ad7fc43020ee5f782d6441 193 SUPERFAMILY SSF46689 10 76 1.35E-15 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JDM601_2048 094d3fe340ad7fc43020ee5f782d6441 193 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 18 31 1.9E-7 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_2048 094d3fe340ad7fc43020ee5f782d6441 193 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 39 62 1.9E-7 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_2048 094d3fe340ad7fc43020ee5f782d6441 193 Gene3D G3DSA:1.10.357.10 8 184 7.0E-45 T 12-10-2018 JDM601_2048 094d3fe340ad7fc43020ee5f782d6441 193 SUPERFAMILY SSF48498 83 171 2.09E-10 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily JDM601_2048 094d3fe340ad7fc43020ee5f782d6441 193 Pfam PF00440 Bacterial regulatory proteins, tetR family 18 63 7.8E-13 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_0549 c2e1fdb56a4df2f7bd756fc307750647 549 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 9 188 2.8E-26 T 12-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 JDM601_0549 c2e1fdb56a4df2f7bd756fc307750647 549 Gene3D G3DSA:3.40.50.1220 223 348 1.1E-6 T 12-10-2018 JDM601_0549 c2e1fdb56a4df2f7bd756fc307750647 549 Hamap MF_01659 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [menD]. 2 549 29.929 T 12-10-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 JDM601_0549 c2e1fdb56a4df2f7bd756fc307750647 549 TIGRFAM TIGR00173 menD: 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase 8 415 3.2E-102 T 12-10-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 JDM601_0549 c2e1fdb56a4df2f7bd756fc307750647 549 PIRSF PIRSF004983 1 549 2.0E-143 T 12-10-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 JDM601_0549 c2e1fdb56a4df2f7bd756fc307750647 549 SUPERFAMILY SSF52518 8 193 3.93E-30 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold JDM601_0549 c2e1fdb56a4df2f7bd756fc307750647 549 Gene3D G3DSA:3.40.50.970 3 208 8.0E-74 T 12-10-2018 JDM601_0549 c2e1fdb56a4df2f7bd756fc307750647 549 Gene3D G3DSA:3.40.50.970 350 549 6.7E-67 T 12-10-2018 JDM601_0549 c2e1fdb56a4df2f7bd756fc307750647 549 SUPERFAMILY SSF52518 355 537 6.92E-15 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold JDM601_0883 1321a8772936da409f93bf408ae466d8 316 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 75 302 4.3E-48 T 12-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 JDM601_0883 1321a8772936da409f93bf408ae466d8 316 Gene3D G3DSA:3.90.850.10 12 304 1.7E-77 T 12-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 JDM601_0883 1321a8772936da409f93bf408ae466d8 316 SUPERFAMILY SSF56529 70 302 4.06E-54 T 12-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 JDM601_2026 790471c94a7e9b8ff8aace4b00f8a94b 287 Gene3D G3DSA:3.40.50.150 12 287 1.5E-97 T 12-10-2018 JDM601_2026 790471c94a7e9b8ff8aace4b00f8a94b 287 SUPERFAMILY SSF53335 13 287 3.38E-74 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JDM601_2026 790471c94a7e9b8ff8aace4b00f8a94b 287 Pfam PF02353 Mycolic acid cyclopropane synthetase 5 283 6.2E-119 T 12-10-2018 JDM601_2026 790471c94a7e9b8ff8aace4b00f8a94b 287 PIRSF PIRSF003085 2 287 5.3E-111 T 12-10-2018 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 JDM601_2371 726a1efe9f84679de7f2a918db8f8e87 181 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 15 181 32.442 T 12-10-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 JDM601_2371 726a1efe9f84679de7f2a918db8f8e87 181 Pfam PF00156 Phosphoribosyl transferase domain 39 160 4.9E-21 T 12-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 JDM601_2371 726a1efe9f84679de7f2a918db8f8e87 181 Gene3D G3DSA:3.40.50.2020 5 181 7.6E-52 T 12-10-2018 JDM601_2371 726a1efe9f84679de7f2a918db8f8e87 181 SUPERFAMILY SSF53271 20 173 1.26E-37 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like JDM601_0084 605532d5f109065707442f9677732eb3 214 Gene3D G3DSA:1.10.357.10 66 214 6.3E-34 T 12-10-2018 JDM601_0084 605532d5f109065707442f9677732eb3 214 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 24 37 4.0E-6 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_0084 605532d5f109065707442f9677732eb3 214 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 45 68 4.0E-6 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_0084 605532d5f109065707442f9677732eb3 214 Gene3D G3DSA:1.10.10.60 3 65 1.3E-15 T 12-10-2018 JDM601_0084 605532d5f109065707442f9677732eb3 214 SUPERFAMILY SSF48498 89 207 1.67E-24 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily JDM601_0084 605532d5f109065707442f9677732eb3 214 Pfam PF00440 Bacterial regulatory proteins, tetR family 27 69 9.0E-13 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_0084 605532d5f109065707442f9677732eb3 214 SUPERFAMILY SSF46689 12 94 1.85E-17 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JDM601_3254 d9f721981d6c5974c40c65f02be752f7 256 Gene3D G3DSA:3.40.50.1820 3 236 1.7E-22 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_3254 d9f721981d6c5974c40c65f02be752f7 256 SUPERFAMILY SSF53474 6 175 6.64E-17 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_3254 d9f721981d6c5974c40c65f02be752f7 256 Pfam PF07224 Chlorophyllase 10 123 1.2E-7 T 12-10-2018 IPR017395 Chlorophyllase GO:0015996|GO:0047746 KEGG: 00860+3.1.1.14|MetaCyc: PWY-5098|MetaCyc: PWY-6927|MetaCyc: PWY-7164 JDM601_3850 57d7306f0ef1995d165c5175d2f995d1 395 Pfam PF04909 Amidohydrolase 83 387 6.0E-35 T 12-10-2018 IPR006680 Amidohydrolase-related GO:0016787 JDM601_3850 57d7306f0ef1995d165c5175d2f995d1 395 Gene3D G3DSA:3.20.20.140 5 387 2.9E-98 T 12-10-2018 JDM601_3850 57d7306f0ef1995d165c5175d2f995d1 395 SUPERFAMILY SSF51556 7 387 5.73E-72 T 12-10-2018 IPR032466 Metal-dependent hydrolase JDM601_1010 3e5d82cc30ac86710d8a3813b13f69a1 348 SUPERFAMILY SSF51735 6 126 1.32E-11 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_1010 3e5d82cc30ac86710d8a3813b13f69a1 348 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 5 91 1.2E-7 T 12-10-2018 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 JDM601_1010 3e5d82cc30ac86710d8a3813b13f69a1 348 Gene3D G3DSA:3.40.50.720 1 131 3.4E-18 T 12-10-2018 JDM601_2017 cae9919e0b7b4846da3e49a79be921f6 124 Pfam PF05991 YacP-like NYN domain 4 123 1.1E-9 T 12-10-2018 IPR010298 Protein of unknown function DUF901 JDM601_3837 a00047cb757e78bcdcc433b3e65dc25d 268 SUPERFAMILY SSF52096 8 267 3.98E-75 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily JDM601_3837 a00047cb757e78bcdcc433b3e65dc25d 268 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 103 123 - T 12-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 JDM601_3837 a00047cb757e78bcdcc433b3e65dc25d 268 Gene3D G3DSA:1.10.12.10 208 268 6.4E-26 T 12-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal JDM601_3837 a00047cb757e78bcdcc433b3e65dc25d 268 Gene3D G3DSA:3.90.226.10 1 207 9.8E-74 T 12-10-2018 JDM601_3837 a00047cb757e78bcdcc433b3e65dc25d 268 Pfam PF00378 Enoyl-CoA hydratase/isomerase 14 267 9.8E-53 T 12-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 JDM601_0941 32d65dd7115eb4d51ae08f7414ce2605 290 SUPERFAMILY SSF53448 1 277 7.89E-51 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases JDM601_0941 32d65dd7115eb4d51ae08f7414ce2605 290 Pfam PF00483 Nucleotidyl transferase 3 264 6.0E-26 T 12-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 JDM601_0941 32d65dd7115eb4d51ae08f7414ce2605 290 Gene3D G3DSA:3.90.550.10 1 287 8.9E-76 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases JDM601_3842 0721565f59175c5b5009a682863bfc7d 393 PIRSF PIRSF000429 1 393 7.4E-103 T 12-10-2018 IPR002155 Thiolase GO:0016747 JDM601_3842 0721565f59175c5b5009a682863bfc7d 393 Pfam PF00108 Thiolase, N-terminal domain 7 264 3.5E-53 T 12-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 JDM601_3842 0721565f59175c5b5009a682863bfc7d 393 Pfam PF02803 Thiolase, C-terminal domain 272 391 8.0E-41 T 12-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 JDM601_3842 0721565f59175c5b5009a682863bfc7d 393 SUPERFAMILY SSF53901 272 392 7.51E-39 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 JDM601_3842 0721565f59175c5b5009a682863bfc7d 393 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 84 102 - T 12-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 JDM601_3842 0721565f59175c5b5009a682863bfc7d 393 Gene3D G3DSA:3.40.47.10 126 390 1.1E-115 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 JDM601_3842 0721565f59175c5b5009a682863bfc7d 393 ProSitePatterns PS00099 Thiolases active site. 374 387 - T 12-10-2018 IPR020610 Thiolase, active site GO:0016747 JDM601_3842 0721565f59175c5b5009a682863bfc7d 393 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 8 391 1.5E-106 T 12-10-2018 IPR002155 Thiolase GO:0016747 JDM601_3842 0721565f59175c5b5009a682863bfc7d 393 SUPERFAMILY SSF53901 3 268 1.74E-58 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 JDM601_3842 0721565f59175c5b5009a682863bfc7d 393 Gene3D G3DSA:3.40.47.10 8 276 1.1E-115 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 JDM601_3008 99b59b6ce5aeab08b7736e49de518bf9 151 Gene3D G3DSA:3.30.2010.20 25 146 3.7E-7 T 12-10-2018 IPR038555 Zincin-like metallopeptidase superfamily JDM601_3008 99b59b6ce5aeab08b7736e49de518bf9 151 Pfam PF06262 Zincin-like metallopeptidase 54 143 1.7E-5 T 12-10-2018 IPR010428 Zincin-like metallopeptidase JDM601_3008 99b59b6ce5aeab08b7736e49de518bf9 151 SUPERFAMILY SSF55486 25 147 9.89E-21 T 12-10-2018 JDM601_1518 d2bc87ff6a6b0dc49ad00449fc4ea144 243 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 50 217 1.5E-43 T 12-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 JDM601_1518 d2bc87ff6a6b0dc49ad00449fc4ea144 243 Hamap MF_00063 Phosphoadenosine phosphosulfate reductase [cysH]. 1 242 36.697 T 12-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 JDM601_1518 d2bc87ff6a6b0dc49ad00449fc4ea144 243 PIRSF PIRSF000857 2 243 4.5E-86 T 12-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 JDM601_1518 d2bc87ff6a6b0dc49ad00449fc4ea144 243 SUPERFAMILY SSF52402 57 206 1.91E-40 T 12-10-2018 JDM601_1518 d2bc87ff6a6b0dc49ad00449fc4ea144 243 TIGRFAM TIGR00434 cysH: phosophoadenylyl-sulfate reductase 55 241 2.3E-54 T 12-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 JDM601_1518 d2bc87ff6a6b0dc49ad00449fc4ea144 243 TIGRFAM TIGR02055 APS_reductase: adenylylsulfate reductase, thioredoxin dependent 54 240 3.5E-75 T 12-10-2018 IPR011798 Adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019344|GO:0055114 KEGG: 00920+1.8.4.8 JDM601_1518 d2bc87ff6a6b0dc49ad00449fc4ea144 243 Gene3D G3DSA:3.40.50.620 4 243 1.3E-64 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JDM601_3032 63b69122a0a7c58707aad0f7d1130cc3 171 SMART SM01001 8 157 1.6E-98 T 12-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 JDM601_3032 63b69122a0a7c58707aad0f7d1130cc3 171 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 10 164 4.4E-67 T 12-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 JDM601_3032 63b69122a0a7c58707aad0f7d1130cc3 171 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 10 161 33.18 T 12-10-2018 IPR033747 Class I PurE JDM601_3032 63b69122a0a7c58707aad0f7d1130cc3 171 PIRSF PIRSF001338 5 168 2.5E-68 T 12-10-2018 IPR024694 PurE, prokaryotic type GO:0006189 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234 JDM601_3032 63b69122a0a7c58707aad0f7d1130cc3 171 SUPERFAMILY SSF52255 8 166 5.1E-66 T 12-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 JDM601_3032 63b69122a0a7c58707aad0f7d1130cc3 171 Gene3D G3DSA:3.40.50.7700 1 171 8.1E-77 T 12-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 JDM601_3032 63b69122a0a7c58707aad0f7d1130cc3 171 Pfam PF00731 AIR carboxylase 9 154 2.4E-66 T 12-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 JDM601_2083 f3f3b6746bf92ff70dc6d307f6203d1e 341 Gene3D G3DSA:1.50.10.150 2 334 5.4E-6 T 12-10-2018 IPR038665 Voltage-dependent anion channel superfamily JDM601_2083 f3f3b6746bf92ff70dc6d307f6203d1e 341 Pfam PF03595 Voltage-dependent anion channel 4 324 1.4E-39 T 12-10-2018 IPR004695 Voltage-dependent anion channel GO:0016021|GO:0055085 JDM601_0305 1621b1f32a9095b49e7078bd198c6551 187 SUPERFAMILY SSF48317 7 185 1.44E-29 T 12-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily JDM601_0305 1621b1f32a9095b49e7078bd198c6551 187 Gene3D G3DSA:1.20.144.10 101 187 5.6E-18 T 12-10-2018 JDM601_0305 1621b1f32a9095b49e7078bd198c6551 187 Gene3D G3DSA:1.20.144.10 2 100 3.3E-5 T 12-10-2018 JDM601_0305 1621b1f32a9095b49e7078bd198c6551 187 Pfam PF01569 PAP2 superfamily 70 181 4.4E-15 T 12-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase JDM601_0305 1621b1f32a9095b49e7078bd198c6551 187 SMART SM00014 69 179 4.9E-15 T 12-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase JDM601_2029 251cbfa6b500f0d107c8314b76d15dcb 296 PIRSF PIRSF003085 1 296 1.9E-101 T 12-10-2018 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 JDM601_2029 251cbfa6b500f0d107c8314b76d15dcb 296 Pfam PF02353 Mycolic acid cyclopropane synthetase 6 289 7.4E-113 T 12-10-2018 JDM601_2029 251cbfa6b500f0d107c8314b76d15dcb 296 Gene3D G3DSA:3.40.50.150 13 296 2.6E-96 T 12-10-2018 JDM601_2029 251cbfa6b500f0d107c8314b76d15dcb 296 SUPERFAMILY SSF53335 14 294 6.72E-74 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JDM601_0395 c64971e747a31f8dd6d738e20836480c 547 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 82 506 4.6E-204 T 12-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 JDM601_0395 c64971e747a31f8dd6d738e20836480c 547 Gene3D G3DSA:3.20.20.540 127 438 4.5E-148 T 12-10-2018 IPR038521 ThiC/Bza superfamily KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 JDM601_0395 c64971e747a31f8dd6d738e20836480c 547 Pfam PF01964 Radical SAM ThiC family 82 502 7.4E-196 T 12-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 JDM601_0395 c64971e747a31f8dd6d738e20836480c 547 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 81 507 93.867 T 12-10-2018 IPR037509 Phosphomethylpyrimidine synthase GO:0009228|GO:0016830 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 JDM601_0395 c64971e747a31f8dd6d738e20836480c 547 Pfam PF13667 ThiC-associated domain 15 72 6.2E-10 T 12-10-2018 IPR025747 ThiC-associated domain KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 JDM601_2480 a267885dad4371b9492318dc821a514d 294 Gene3D G3DSA:1.10.3720.10 58 275 3.0E-40 T 12-10-2018 IPR035906 MetI-like superfamily JDM601_2480 a267885dad4371b9492318dc821a514d 294 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 68 165 1.5E-16 T 12-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 JDM601_2480 a267885dad4371b9492318dc821a514d 294 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 87 272 5.8E-19 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 JDM601_2480 a267885dad4371b9492318dc821a514d 294 SUPERFAMILY SSF161098 67 272 1.16E-33 T 12-10-2018 IPR035906 MetI-like superfamily JDM601_3454 cc27f3392cf725633c9ee8eff141fa77 263 SUPERFAMILY SSF51735 1 246 1.0E-46 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_3454 cc27f3392cf725633c9ee8eff141fa77 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 1.3E-17 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3454 cc27f3392cf725633c9ee8eff141fa77 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 209 229 1.3E-17 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3454 cc27f3392cf725633c9ee8eff141fa77 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 61 72 1.3E-17 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3454 cc27f3392cf725633c9ee8eff141fa77 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 99 115 1.3E-17 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3454 cc27f3392cf725633c9ee8eff141fa77 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 1.3E-17 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3454 cc27f3392cf725633c9ee8eff141fa77 263 Pfam PF00106 short chain dehydrogenase 1 117 1.8E-14 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3454 cc27f3392cf725633c9ee8eff141fa77 263 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 152 244 1.4E-16 T 12-10-2018 JDM601_3454 cc27f3392cf725633c9ee8eff141fa77 263 Gene3D G3DSA:3.40.50.720 1 246 2.4E-48 T 12-10-2018 JDM601_1163 8f625b8cb9c40eada4cb40f0a0faa8be 182 Pfam PF10400 Virulence activator alpha C-term 101 182 3.0E-18 T 12-10-2018 IPR018309 Transcription regulator PadR, C-terminal JDM601_1163 8f625b8cb9c40eada4cb40f0a0faa8be 182 SUPERFAMILY SSF46785 3 181 1.36E-36 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JDM601_1163 8f625b8cb9c40eada4cb40f0a0faa8be 182 Gene3D G3DSA:1.10.10.10 1 88 6.7E-24 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JDM601_1163 8f625b8cb9c40eada4cb40f0a0faa8be 182 Pfam PF03551 Transcriptional regulator PadR-like family 7 80 2.6E-14 T 12-10-2018 IPR005149 Transcription regulator PadR, N-terminal JDM601_4001 735640dda5d65d57cdab577195c15ae3 285 Gene3D G3DSA:3.40.960.10 177 278 2.7E-8 T 12-10-2018 JDM601_1284 317d7228b09b5a36894062c8a215508b 292 Gene3D G3DSA:3.20.20.30 4 291 1.1E-48 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 JDM601_1284 317d7228b09b5a36894062c8a215508b 292 Pfam PF00296 Luciferase-like monooxygenase 20 239 4.2E-35 T 12-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 JDM601_1284 317d7228b09b5a36894062c8a215508b 292 SUPERFAMILY SSF51679 6 287 1.47E-49 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 JDM601_1823 877df7acc087694e34a12c1562fd87e2 337 Pfam PF09995 Uncharacterized protein conserved in bacteria (DUF2236) 11 242 3.3E-51 T 12-10-2018 IPR018713 Domain of unknown function DUF2236 JDM601_3134 744a187ab960a368494f42d48df374eb 207 SUPERFAMILY SSF53271 3 205 1.06E-58 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like JDM601_3134 744a187ab960a368494f42d48df374eb 207 Gene3D G3DSA:3.40.50.2020 1 207 5.4E-71 T 12-10-2018 JDM601_3134 744a187ab960a368494f42d48df374eb 207 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 2 207 39.622 T 12-10-2018 IPR034332 Uracil phosphoribosyltransferase, bacterial-type KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 JDM601_3134 744a187ab960a368494f42d48df374eb 207 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 2 206 1.4E-74 T 12-10-2018 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 JDM601_3134 744a187ab960a368494f42d48df374eb 207 Pfam PF14681 Uracil phosphoribosyltransferase 5 205 6.2E-60 T 12-10-2018 JDM601_1137 b2687d90e20ae3eec926b18c764ca416 239 Pfam PF02146 Sir2 family 8 184 5.6E-52 T 12-10-2018 IPR003000 Sirtuin family GO:0070403 JDM601_1137 b2687d90e20ae3eec926b18c764ca416 239 Gene3D G3DSA:3.30.1600.10 17 154 2.5E-77 T 12-10-2018 IPR026591 Sirtuin, catalytic core small domain superfamily JDM601_1137 b2687d90e20ae3eec926b18c764ca416 239 Hamap MF_01121 NAD-dependent protein deacylase [cobB]. 1 234 55.084 T 12-10-2018 IPR027546 Sirtuin, class III GO:0036054|GO:0036055|GO:0070403 Reactome: R-HSA-2151201 JDM601_1137 b2687d90e20ae3eec926b18c764ca416 239 SUPERFAMILY SSF52467 3 232 1.33E-78 T 12-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily JDM601_1137 b2687d90e20ae3eec926b18c764ca416 239 Gene3D G3DSA:3.40.50.1220 3 226 2.5E-77 T 12-10-2018 JDM601_1484 bb83bde0f72ba808e5d6f64d66471d30 1756 PRINTS PR01228 Eggshell protein signature 220 231 1.2E-6 T 12-10-2018 JDM601_1484 bb83bde0f72ba808e5d6f64d66471d30 1756 PRINTS PR01228 Eggshell protein signature 338 348 1.2E-6 T 12-10-2018 JDM601_1484 bb83bde0f72ba808e5d6f64d66471d30 1756 PRINTS PR01228 Eggshell protein signature 369 387 1.2E-6 T 12-10-2018 JDM601_1484 bb83bde0f72ba808e5d6f64d66471d30 1756 PRINTS PR01228 Eggshell protein signature 309 324 1.2E-6 T 12-10-2018 JDM601_4055 1f4bb7ae50ea94aeaa8bf5c239a21000 166 Pfam PF11716 Mycothiol maleylpyruvate isomerase N-terminal domain 5 106 1.2E-5 T 12-10-2018 IPR024344 Mycothiol-dependent maleylpyruvate isomerase, metal-binding domain GO:0046872 JDM601_4055 1f4bb7ae50ea94aeaa8bf5c239a21000 166 TIGRFAM TIGR03086 TIGR03086: TIGR03086 family protein 2 165 1.4E-44 T 12-10-2018 IPR017520 Conserved hypothetical protein CHP03086 JDM601_4055 1f4bb7ae50ea94aeaa8bf5c239a21000 166 SUPERFAMILY SSF109854 2 113 1.42E-9 T 12-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes JDM601_4055 1f4bb7ae50ea94aeaa8bf5c239a21000 166 TIGRFAM TIGR03083 TIGR03083: uncharacterized Actinobacterial protein TIGR03083 2 165 1.1E-27 T 12-10-2018 IPR017517 Conserved hypothetical protein CHP03083, actinobacterial-type JDM601_1994 9eeb92f770ca59c2c8bc7ac6becb908a 248 Pfam PF03883 Peroxide stress protein YaaA 2 220 1.1E-34 T 12-10-2018 IPR005583 Peroxide stress protein YaaA JDM601_0708 09c609e2cad074f81e0364b3b9ac650f 388 Pfam PF01636 Phosphotransferase enzyme family 108 316 6.5E-17 T 12-10-2018 IPR002575 Aminoglycoside phosphotransferase JDM601_0708 09c609e2cad074f81e0364b3b9ac650f 388 Gene3D G3DSA:3.90.1200.10 166 340 8.8E-12 T 12-10-2018 JDM601_0708 09c609e2cad074f81e0364b3b9ac650f 388 SMART SM00587 146 324 8.7E-4 T 12-10-2018 IPR015897 CHK kinase-like JDM601_0708 09c609e2cad074f81e0364b3b9ac650f 388 SUPERFAMILY SSF56112 12 349 9.91E-27 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily JDM601_1800 34ac065c719bb08ad39971943cd2a627 400 Gene3D G3DSA:3.40.47.10 7 400 7.1E-101 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 JDM601_1800 34ac065c719bb08ad39971943cd2a627 400 SUPERFAMILY SSF53901 7 230 3.61E-40 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 JDM601_1800 34ac065c719bb08ad39971943cd2a627 400 Pfam PF00108 Thiolase, N-terminal domain 25 224 1.9E-8 T 12-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 JDM601_1800 34ac065c719bb08ad39971943cd2a627 400 SUPERFAMILY SSF53901 281 389 1.01E-19 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 JDM601_1800 34ac065c719bb08ad39971943cd2a627 400 PIRSF PIRSF000429 1 400 2.8E-37 T 12-10-2018 IPR002155 Thiolase GO:0016747 JDM601_1108 0cb9abbc47dca3813c91b646ff482629 548 SMART SM00327 347 538 1.6E-15 T 12-10-2018 IPR002035 von Willebrand factor, type A JDM601_1108 0cb9abbc47dca3813c91b646ff482629 548 Gene3D G3DSA:3.40.50.410 347 533 1.7E-16 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily JDM601_1108 0cb9abbc47dca3813c91b646ff482629 548 SUPERFAMILY SSF53300 348 535 1.82E-19 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily JDM601_1108 0cb9abbc47dca3813c91b646ff482629 548 Pfam PF13519 von Willebrand factor type A domain 350 464 1.4E-8 T 12-10-2018 IPR002035 von Willebrand factor, type A JDM601_1600 62a9e4f7c33586dc62c18326568b91db 272 SUPERFAMILY SSF69118 126 249 2.47E-21 T 12-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 JDM601_1600 62a9e4f7c33586dc62c18326568b91db 272 Gene3D G3DSA:1.20.1290.10 114 256 1.4E-19 T 12-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 JDM601_2566 5b3cd02c80e566c9489fea28bd325eb1 177 Gene3D G3DSA:3.30.300.70 7 82 1.5E-6 T 12-10-2018 IPR035956 RimP, N-terminal domain superfamily JDM601_2566 5b3cd02c80e566c9489fea28bd325eb1 177 SUPERFAMILY SSF75420 9 84 6.15E-13 T 12-10-2018 IPR035956 RimP, N-terminal domain superfamily JDM601_2566 5b3cd02c80e566c9489fea28bd325eb1 177 SUPERFAMILY SSF74942 86 153 7.32E-9 T 12-10-2018 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily JDM601_2566 5b3cd02c80e566c9489fea28bd325eb1 177 Pfam PF17384 RimP C-terminal SH3 domain 88 153 1.7E-12 T 12-10-2018 IPR028998 Ribosome maturation factor RimP, C-terminal JDM601_2566 5b3cd02c80e566c9489fea28bd325eb1 177 Pfam PF02576 RimP N-terminal domain 20 84 1.0E-9 T 12-10-2018 IPR028989 Ribosome maturation factor RimP, N-terminal JDM601_2566 5b3cd02c80e566c9489fea28bd325eb1 177 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 9 153 19.885 T 12-10-2018 IPR003728 Ribosome maturation factor RimP GO:0042274 JDM601_4017 63a981dc4b2c1647f3d52f1b96c3f7cb 943 SUPERFAMILY SSF82866 129 327 1.1E-29 T 12-10-2018 JDM601_4017 63a981dc4b2c1647f3d52f1b96c3f7cb 943 SUPERFAMILY SSF82866 679 907 1.57E-26 T 12-10-2018 JDM601_4017 63a981dc4b2c1647f3d52f1b96c3f7cb 943 Pfam PF03176 MMPL family 32 360 1.2E-109 T 12-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 JDM601_4017 63a981dc4b2c1647f3d52f1b96c3f7cb 943 Pfam PF03176 MMPL family 580 907 1.2E-104 T 12-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 JDM601_4017 63a981dc4b2c1647f3d52f1b96c3f7cb 943 TIGRFAM TIGR00833 actII: transport protein 2 907 0.0 T 12-10-2018 IPR004707 Membrane transport protein MmpL family GO:0016021 JDM601_4017 63a981dc4b2c1647f3d52f1b96c3f7cb 943 Gene3D G3DSA:1.20.1640.10 135 342 1.7E-7 T 12-10-2018 JDM601_3853 439793689689d3a48bc2f7fea13199c4 300 SUPERFAMILY SSF54593 135 292 7.43E-34 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase JDM601_3853 439793689689d3a48bc2f7fea13199c4 300 Gene3D G3DSA:3.10.180.10 134 300 8.3E-56 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase JDM601_3853 439793689689d3a48bc2f7fea13199c4 300 Gene3D G3DSA:3.10.180.10 1 129 1.6E-36 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase JDM601_3853 439793689689d3a48bc2f7fea13199c4 300 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 142 267 9.4E-19 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain JDM601_3853 439793689689d3a48bc2f7fea13199c4 300 SUPERFAMILY SSF54593 1 123 1.03E-22 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase JDM601_0637 ad1b4715c641bd9eb305b291c88f5079 159 Pfam PF13577 SnoaL-like domain 9 137 2.5E-22 T 12-10-2018 IPR037401 SnoaL-like domain JDM601_0637 ad1b4715c641bd9eb305b291c88f5079 159 Gene3D G3DSA:3.10.450.50 1 148 4.5E-32 T 12-10-2018 JDM601_0637 ad1b4715c641bd9eb305b291c88f5079 159 SUPERFAMILY SSF54427 5 152 1.49E-30 T 12-10-2018 IPR032710 NTF2-like domain superfamily JDM601_3336 1d93ed1c5e5fe20ad7a30de2927ecedf 100 ProSitePatterns PS00050 Ribosomal protein L23 signature. 80 95 - T 12-10-2018 IPR001014 Ribosomal protein L23/L25, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JDM601_3336 1d93ed1c5e5fe20ad7a30de2927ecedf 100 Gene3D G3DSA:3.30.70.330 6 97 2.6E-32 T 12-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily JDM601_3336 1d93ed1c5e5fe20ad7a30de2927ecedf 100 Pfam PF00276 Ribosomal protein L23 9 91 1.9E-32 T 12-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 JDM601_3336 1d93ed1c5e5fe20ad7a30de2927ecedf 100 SUPERFAMILY SSF54189 6 93 5.76E-33 T 12-10-2018 IPR012678 Ribosomal protein L23/L15e core domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 JDM601_3336 1d93ed1c5e5fe20ad7a30de2927ecedf 100 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 8 98 21.929 T 12-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 JDM601_0831 cfc8a86ef31bfb5cf4e296c38da03265 145 SUPERFAMILY SSF55961 1 139 3.74E-22 T 12-10-2018 JDM601_0831 cfc8a86ef31bfb5cf4e296c38da03265 145 Gene3D G3DSA:3.30.530.20 1 142 5.6E-12 T 12-10-2018 IPR023393 START-like domain superfamily JDM601_0831 cfc8a86ef31bfb5cf4e296c38da03265 145 Pfam PF10604 Polyketide cyclase / dehydrase and lipid transport 1 141 3.3E-20 T 12-10-2018 IPR019587 Polyketide cyclase/dehydrase JDM601_2707 ec5658185af47e3b20eb0cee4142358f 250 Pfam PF09339 IclR helix-turn-helix domain 8 58 3.3E-14 T 12-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 JDM601_2707 ec5658185af47e3b20eb0cee4142358f 250 SMART SM00346 6 95 2.8E-18 T 12-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 JDM601_2707 ec5658185af47e3b20eb0cee4142358f 250 Pfam PF01614 Bacterial transcriptional regulator 123 245 3.3E-30 T 12-10-2018 IPR014757 Transcription regulator IclR, C-terminal JDM601_2707 ec5658185af47e3b20eb0cee4142358f 250 SUPERFAMILY SSF46785 6 79 1.96E-13 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JDM601_2707 ec5658185af47e3b20eb0cee4142358f 250 Gene3D G3DSA:3.30.450.40 76 250 1.9E-51 T 12-10-2018 IPR029016 GAF-like domain superfamily JDM601_2707 ec5658185af47e3b20eb0cee4142358f 250 SUPERFAMILY SSF55781 63 250 7.19E-47 T 12-10-2018 JDM601_2707 ec5658185af47e3b20eb0cee4142358f 250 Gene3D G3DSA:1.10.10.10 2 72 1.2E-16 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JDM601_3898 dc9e51506ad54fd58aebf34aaa0b7ca8 196 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 71 87 - T 12-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 JDM601_3898 dc9e51506ad54fd58aebf34aaa0b7ca8 196 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 11 194 41.763 T 12-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 JDM601_3898 dc9e51506ad54fd58aebf34aaa0b7ca8 196 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 17 195 1.4E-72 T 12-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 JDM601_3898 dc9e51506ad54fd58aebf34aaa0b7ca8 196 Pfam PF01227 GTP cyclohydrolase I 16 193 2.6E-76 T 12-10-2018 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 JDM601_3898 dc9e51506ad54fd58aebf34aaa0b7ca8 196 Gene3D G3DSA:1.10.286.10 3 59 1.8E-19 T 12-10-2018 JDM601_3898 dc9e51506ad54fd58aebf34aaa0b7ca8 196 Gene3D G3DSA:3.30.1130.10 61 196 4.5E-59 T 12-10-2018 JDM601_3898 dc9e51506ad54fd58aebf34aaa0b7ca8 196 ProSitePatterns PS00860 GTP cyclohydrolase I signature 2. 121 131 - T 12-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 JDM601_3898 dc9e51506ad54fd58aebf34aaa0b7ca8 196 SUPERFAMILY SSF55620 8 194 2.82E-76 T 12-10-2018 JDM601_1937 cd8677defc3e9f391c2502d568e189b4 373 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 50 145 8.6E-13 T 12-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 JDM601_1937 cd8677defc3e9f391c2502d568e189b4 373 Gene3D G3DSA:3.40.50.1240 48 160 3.6E-15 T 12-10-2018 IPR029033 Histidine phosphatase superfamily JDM601_1937 cd8677defc3e9f391c2502d568e189b4 373 SUPERFAMILY SSF53254 48 274 2.13E-17 T 12-10-2018 IPR029033 Histidine phosphatase superfamily JDM601_0464 54494a6d56a82740daef4f7e96aaed55 76 Pfam PF10724 Protein of unknown function (DUF2516) 1 73 8.3E-25 T 12-10-2018 IPR019662 Protein of unknown function DUF2516 JDM601_3401 107b425f54408ffdab334a5186a5ff41 265 Gene3D G3DSA:3.90.226.10 3 245 1.8E-58 T 12-10-2018 JDM601_3401 107b425f54408ffdab334a5186a5ff41 265 SUPERFAMILY SSF52096 5 238 9.22E-57 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily JDM601_3401 107b425f54408ffdab334a5186a5ff41 265 Pfam PF00378 Enoyl-CoA hydratase/isomerase 19 231 2.7E-36 T 12-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 JDM601_3059 7a63818dd6298a94ff587cb2019bf4f2 557 Pfam PF00732 GMC oxidoreductase 47 315 1.6E-14 T 12-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 JDM601_3059 7a63818dd6298a94ff587cb2019bf4f2 557 Pfam PF05199 GMC oxidoreductase 425 540 5.3E-24 T 12-10-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 JDM601_3059 7a63818dd6298a94ff587cb2019bf4f2 557 SUPERFAMILY SSF51905 42 548 3.07E-58 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_3059 7a63818dd6298a94ff587cb2019bf4f2 557 Gene3D G3DSA:3.50.50.60 444 551 2.0E-16 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_3059 7a63818dd6298a94ff587cb2019bf4f2 557 Gene3D G3DSA:3.50.50.60 47 314 6.6E-25 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_3059 7a63818dd6298a94ff587cb2019bf4f2 557 Gene3D G3DSA:3.30.410.40 172 238 6.6E-25 T 12-10-2018 JDM601_3059 7a63818dd6298a94ff587cb2019bf4f2 557 SUPERFAMILY SSF54373 370 479 3.92E-7 T 12-10-2018 JDM601_2862 fcb8f4aa4a783fc8a74c015ad478fb3e 437 Hamap MF_01358 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic [ndhH]. 26 437 46.157 T 12-10-2018 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 JDM601_2862 fcb8f4aa4a783fc8a74c015ad478fb3e 437 ProSitePatterns PS00535 Respiratory chain NADH dehydrogenase 49 Kd subunit signature. 69 80 - T 12-10-2018 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 JDM601_2862 fcb8f4aa4a783fc8a74c015ad478fb3e 437 SUPERFAMILY SSF56762 42 437 4.71E-119 T 12-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 JDM601_2862 fcb8f4aa4a783fc8a74c015ad478fb3e 437 Gene3D G3DSA:1.10.645.20 31 437 3.7E-159 T 12-10-2018 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 JDM601_2862 fcb8f4aa4a783fc8a74c015ad478fb3e 437 TIGRFAM TIGR01962 NuoD: NADH dehydrogenase (quinone), D subunit 32 437 7.9E-170 T 12-10-2018 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 JDM601_2862 fcb8f4aa4a783fc8a74c015ad478fb3e 437 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 149 437 5.2E-106 T 12-10-2018 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 JDM601_1978 8dc6616f7453dd64725d8104aa200850 339 SMART SM01350 186 336 9.9E-7 T 12-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 JDM601_1978 8dc6616f7453dd64725d8104aa200850 339 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 3 155 9.7E-42 T 12-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 JDM601_1978 8dc6616f7453dd64725d8104aa200850 339 Pfam PF00393 6-phosphogluconate dehydrogenase, C-terminal domain 186 215 4.0E-10 T 12-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 JDM601_1978 8dc6616f7453dd64725d8104aa200850 339 Pfam PF00393 6-phosphogluconate dehydrogenase, C-terminal domain 282 315 4.7E-5 T 12-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 JDM601_1978 8dc6616f7453dd64725d8104aa200850 339 Gene3D G3DSA:1.10.1040.10 185 338 1.9E-58 T 12-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 JDM601_1978 8dc6616f7453dd64725d8104aa200850 339 TIGRFAM TIGR00872 gnd_rel: 6-phosphogluconate dehydrogenase (decarboxylating) 1 337 2.7E-140 T 12-10-2018 IPR004849 6-phosphogluconate dehydrogenase, YqeC-type GO:0055114 JDM601_1978 8dc6616f7453dd64725d8104aa200850 339 SUPERFAMILY SSF51735 1 161 6.31E-48 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_1978 8dc6616f7453dd64725d8104aa200850 339 SUPERFAMILY SSF48179 184 334 1.08E-37 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 JDM601_1978 8dc6616f7453dd64725d8104aa200850 339 Gene3D G3DSA:3.40.50.720 1 184 2.9E-53 T 12-10-2018 JDM601_1978 8dc6616f7453dd64725d8104aa200850 339 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 113 138 1.8E-17 T 12-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 JDM601_1978 8dc6616f7453dd64725d8104aa200850 339 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 1 24 1.8E-17 T 12-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 JDM601_1978 8dc6616f7453dd64725d8104aa200850 339 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 60 89 1.8E-17 T 12-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 JDM601_3562 1dfec6e2c603629fa1344a673bbc948d 562 Gene3D G3DSA:3.40.50.410 357 553 1.9E-15 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily JDM601_3562 1dfec6e2c603629fa1344a673bbc948d 562 SUPERFAMILY SSF53300 360 519 2.0E-16 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily JDM601_3562 1dfec6e2c603629fa1344a673bbc948d 562 SMART SM00327 359 548 3.9E-11 T 12-10-2018 IPR002035 von Willebrand factor, type A JDM601_3562 1dfec6e2c603629fa1344a673bbc948d 562 Pfam PF13519 von Willebrand factor type A domain 362 476 5.2E-8 T 12-10-2018 IPR002035 von Willebrand factor, type A JDM601_3638 30d8f874e2f96100323f02b8b778d7c7 506 Pfam PF13193 AMP-binding enzyme C-terminal domain 407 483 2.1E-8 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain JDM601_3638 30d8f874e2f96100323f02b8b778d7c7 506 SUPERFAMILY SSF56801 28 494 8.11E-101 T 12-10-2018 JDM601_3638 30d8f874e2f96100323f02b8b778d7c7 506 Gene3D G3DSA:3.40.50.12780 22 394 9.8E-69 T 12-10-2018 JDM601_3638 30d8f874e2f96100323f02b8b778d7c7 506 Gene3D G3DSA:3.30.300.30 395 499 2.2E-17 T 12-10-2018 JDM601_3638 30d8f874e2f96100323f02b8b778d7c7 506 ProSitePatterns PS00455 Putative AMP-binding domain signature. 157 168 - T 12-10-2018 IPR020845 AMP-binding, conserved site JDM601_3638 30d8f874e2f96100323f02b8b778d7c7 506 Pfam PF00501 AMP-binding enzyme 34 397 5.6E-60 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 JDM601_1734 7d0d4c7a9b73b969b351b95501b9ba01 143 Hamap MF_01008 Transcriptional regulator MraZ [mraZ]. 1 143 48.658 T 12-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 JDM601_1734 7d0d4c7a9b73b969b351b95501b9ba01 143 Gene3D G3DSA:2.40.330.20 1 142 4.3E-41 T 12-10-2018 IPR038619 MraZ superfamily JDM601_1734 7d0d4c7a9b73b969b351b95501b9ba01 143 SUPERFAMILY SSF89447 1 134 6.98E-42 T 12-10-2018 IPR037914 SpoVT-AbrB domain superfamily JDM601_1734 7d0d4c7a9b73b969b351b95501b9ba01 143 TIGRFAM TIGR00242 TIGR00242: division/cell wall cluster transcriptional repressor MraZ 1 141 1.7E-31 T 12-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 JDM601_1734 7d0d4c7a9b73b969b351b95501b9ba01 143 Pfam PF02381 MraZ protein, putative antitoxin-like 1 71 1.8E-20 T 12-10-2018 IPR020603 MraZ domain JDM601_1734 7d0d4c7a9b73b969b351b95501b9ba01 143 Pfam PF02381 MraZ protein, putative antitoxin-like 73 139 2.5E-21 T 12-10-2018 IPR020603 MraZ domain JDM601_1734 7d0d4c7a9b73b969b351b95501b9ba01 143 ProDom PD006745 MRAZ YABB DIVISION CELL 3D-STRUCTURE UNCHARACTERIZED BCR SIMILAR PROTEIN 1 128 9.0E-67 T 12-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 JDM601_1769 99f17c335d70c6955f534f79e82a8bdf 197 TIGRFAM TIGR03847 TIGR03847: conserved hypothetical protein 5 179 5.3E-78 T 12-10-2018 IPR021441 Protein of unknown function DUF3090 JDM601_1769 99f17c335d70c6955f534f79e82a8bdf 197 Pfam PF11290 Protein of unknown function (DUF3090) 6 175 1.2E-68 T 12-10-2018 IPR021441 Protein of unknown function DUF3090 JDM601_3163 6860280dba99a15b1bb3dd7fa7f74a21 222 Gene3D G3DSA:3.40.50.10230 4 220 7.1E-76 T 12-10-2018 IPR036588 Precorrin-8X methylmutase CobH/CbiC superfamily GO:0009236|GO:0016993 JDM601_3163 6860280dba99a15b1bb3dd7fa7f74a21 222 Pfam PF02570 Precorrin-8X methylmutase 21 218 4.2E-68 T 12-10-2018 IPR003722 Cobalamin biosynthesis precorrin-8X methylmutase CobH/CbiC GO:0009236|GO:0016993 JDM601_3163 6860280dba99a15b1bb3dd7fa7f74a21 222 SUPERFAMILY SSF63965 12 218 1.23E-66 T 12-10-2018 IPR036588 Precorrin-8X methylmutase CobH/CbiC superfamily GO:0009236|GO:0016993 JDM601_2449 19610c56866995c205c7804fc1bf01a8 81 Pfam PF11238 Protein of unknown function (DUF3039) 23 78 4.1E-28 T 12-10-2018 IPR021400 Protein of unknown function DUF3039 JDM601_2287 502728689ef8e1dad73a61128760d5bd 225 ProDom PD017293 LIPOPROTEIN MEMBRANE PRECURSOR PALMITATE SIGNAL ANTIGEN LPRG LPPX P27 LPRA 16 219 2.0E-66 T 12-10-2018 IPR009830 LppX/LprAFG lipoprotein family JDM601_2287 502728689ef8e1dad73a61128760d5bd 225 Gene3D G3DSA:2.50.20.20 18 220 6.2E-78 T 12-10-2018 JDM601_2287 502728689ef8e1dad73a61128760d5bd 225 Pfam PF07161 LppX_LprAFG lipoprotein 28 219 1.2E-71 T 12-10-2018 IPR009830 LppX/LprAFG lipoprotein family JDM601_2287 502728689ef8e1dad73a61128760d5bd 225 SUPERFAMILY SSF89392 25 220 1.41E-55 T 12-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX JDM601_2326 8793def395137ff287694351708f0221 913 Gene3D G3DSA:3.90.105.10 834 883 1.8E-7 T 12-10-2018 JDM601_2326 8793def395137ff287694351708f0221 913 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 552 741 5.6E-23 T 12-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 JDM601_2326 8793def395137ff287694351708f0221 913 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 285 510 7.0E-48 T 12-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 JDM601_2326 8793def395137ff287694351708f0221 913 SUPERFAMILY SSF53383 285 759 5.9E-77 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase JDM601_0092 d70d68525f7d08ce28e086dda5cd5bbc 254 Gene3D G3DSA:1.10.1670.40 45 225 9.1E-17 T 12-10-2018 JDM601_0092 d70d68525f7d08ce28e086dda5cd5bbc 254 SUPERFAMILY SSF48150 55 231 6.46E-28 T 12-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 JDM601_0092 d70d68525f7d08ce28e086dda5cd5bbc 254 Gene3D G3DSA:1.10.340.30 64 184 9.1E-17 T 12-10-2018 JDM601_2027 2010924f6681c9b6e1b551799fd54075 417 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 262 374 2.1E-33 T 12-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal JDM601_2027 2010924f6681c9b6e1b551799fd54075 417 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 12 254 3.4E-49 T 12-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal JDM601_2027 2010924f6681c9b6e1b551799fd54075 417 SMART SM00825 Beta-ketoacyl synthase 13 408 1.8E-13 T 12-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain JDM601_2027 2010924f6681c9b6e1b551799fd54075 417 Gene3D G3DSA:3.40.47.10 6 265 6.5E-67 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 JDM601_2027 2010924f6681c9b6e1b551799fd54075 417 Gene3D G3DSA:3.40.47.10 267 417 6.6E-49 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 JDM601_2027 2010924f6681c9b6e1b551799fd54075 417 SUPERFAMILY SSF53901 221 416 6.96E-65 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 JDM601_2027 2010924f6681c9b6e1b551799fd54075 417 SUPERFAMILY SSF53901 11 259 5.26E-54 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 JDM601_0780 640d6e83dec846e757f146097c76651c 109 Pfam PF05305 Protein of unknown function (DUF732) 6 106 2.1E-19 T 12-10-2018 IPR007969 Domain of unknown function DUF732 JDM601_3998 ae57d851f1bf77718edac889dd2197ea 410 Pfam PF00487 Fatty acid desaturase 129 347 7.2E-31 T 12-10-2018 IPR005804 Fatty acid desaturase domain GO:0006629 JDM601_0127 1ac6eb18d4b90452f93543f49658f617 530 Pfam PF02470 MlaD protein 39 112 1.6E-13 T 12-10-2018 IPR003399 Mce/MlaD JDM601_0127 1ac6eb18d4b90452f93543f49658f617 530 TIGRFAM TIGR00996 Mtu_fam_mce: virulence factor Mce family protein 9 292 2.7E-73 T 12-10-2018 IPR005693 Virulence factor Mce protein JDM601_0848 1574d6775b03063d3ae01f862dce6f19 560 Pfam PF05199 GMC oxidoreductase 454 511 2.4E-15 T 12-10-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 JDM601_0848 1574d6775b03063d3ae01f862dce6f19 560 Gene3D G3DSA:3.50.50.60 431 515 6.0E-21 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_0848 1574d6775b03063d3ae01f862dce6f19 560 Gene3D G3DSA:3.50.50.60 184 351 1.3E-27 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_0848 1574d6775b03063d3ae01f862dce6f19 560 Pfam PF00732 GMC oxidoreductase 5 274 9.7E-8 T 12-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 JDM601_0848 1574d6775b03063d3ae01f862dce6f19 560 Gene3D G3DSA:3.50.50.60 3 163 4.8E-26 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_0848 1574d6775b03063d3ae01f862dce6f19 560 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 187 198 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site JDM601_0848 1574d6775b03063d3ae01f862dce6f19 560 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 4.4E-6 T 12-10-2018 JDM601_0848 1574d6775b03063d3ae01f862dce6f19 560 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 526 546 4.4E-6 T 12-10-2018 JDM601_0848 1574d6775b03063d3ae01f862dce6f19 560 SUPERFAMILY SSF51905 1 515 1.04E-47 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_2807 b90ef8bf60de2b32b343c04895abdd83 422 Gene3D G3DSA:3.20.20.140 33 407 4.2E-88 T 12-10-2018 JDM601_2807 b90ef8bf60de2b32b343c04895abdd83 422 Pfam PF04909 Amidohydrolase 95 407 3.2E-30 T 12-10-2018 IPR006680 Amidohydrolase-related GO:0016787 JDM601_2807 b90ef8bf60de2b32b343c04895abdd83 422 SUPERFAMILY SSF51556 37 407 2.72E-64 T 12-10-2018 IPR032466 Metal-dependent hydrolase JDM601_0531 ea93848de8e3fbc3fd7fdc0f4e49dab2 293 Pfam PF01040 UbiA prenyltransferase family 23 252 3.5E-32 T 12-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 JDM601_0531 ea93848de8e3fbc3fd7fdc0f4e49dab2 293 TIGRFAM TIGR00751 menA: 1,4-dihydroxy-2-naphthoate octaprenyltransferase 15 286 1.3E-112 T 12-10-2018 JDM601_0531 ea93848de8e3fbc3fd7fdc0f4e49dab2 293 PIRSF PIRSF005355 1 292 1.4E-81 T 12-10-2018 IPR026046 UbiA prenyltransferase domain containing protein 1 GO:0004659 Reactome: R-HSA-6806664 JDM601_0531 ea93848de8e3fbc3fd7fdc0f4e49dab2 293 Hamap MF_01937 1,4-dihydroxy-2-naphthoate octaprenyltransferase [menA]. 6 289 20.388 T 12-10-2018 IPR004657 1,4-dihydroxy-2-naphthoate octaprenyltransferase GO:0009234|GO:0016021|GO:0046428 KEGG: 00130+2.5.1.74|MetaCyc: PWY-5839|MetaCyc: PWY-5851|MetaCyc: PWY-5852|MetaCyc: PWY-5853|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 JDM601_2361 a10254c25b78400dca302e6c849b455f 291 Pfam PF04228 Putative neutral zinc metallopeptidase 11 285 4.5E-76 T 12-10-2018 IPR007343 Uncharacterised protein family, zinc metallopeptidase putative JDM601_2361 a10254c25b78400dca302e6c849b455f 291 SUPERFAMILY SSF55486 133 270 9.17E-7 T 12-10-2018 JDM601_2247 0aa485ebf444891e4aea328085e5c276 569 SUPERFAMILY SSF51338 25 567 5.46E-20 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 JDM601_2247 0aa485ebf444891e4aea328085e5c276 569 Gene3D G3DSA:2.30.40.10 33 539 1.6E-109 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 JDM601_2247 0aa485ebf444891e4aea328085e5c276 569 Gene3D G3DSA:3.20.20.140 85 523 1.6E-109 T 12-10-2018 JDM601_2247 0aa485ebf444891e4aea328085e5c276 569 Gene3D G3DSA:3.10.310.70 105 217 1.6E-109 T 12-10-2018 JDM601_2247 0aa485ebf444891e4aea328085e5c276 569 Pfam PF07969 Amidohydrolase family 74 564 2.4E-79 T 12-10-2018 IPR013108 Amidohydrolase 3 JDM601_2247 0aa485ebf444891e4aea328085e5c276 569 SUPERFAMILY SSF51556 84 524 8.38E-21 T 12-10-2018 IPR032466 Metal-dependent hydrolase JDM601_4275 9352f8de4328898bae209075ddfa2ea8 203 Pfam PF03061 Thioesterase superfamily 117 188 5.7E-6 T 12-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 JDM601_4275 9352f8de4328898bae209075ddfa2ea8 203 Gene3D G3DSA:1.20.58.350 20 70 2.4E-50 T 12-10-2018 JDM601_4275 9352f8de4328898bae209075ddfa2ea8 203 Gene3D G3DSA:3.10.129.10 71 197 2.4E-50 T 12-10-2018 JDM601_4275 9352f8de4328898bae209075ddfa2ea8 203 SUPERFAMILY SSF54637 7 198 4.07E-42 T 12-10-2018 IPR029069 HotDog domain superfamily JDM601_3608 c94d08018cf3b64997d05076aaf4a761 229 Gene3D G3DSA:3.40.50.720 1 228 2.1E-77 T 12-10-2018 JDM601_3608 c94d08018cf3b64997d05076aaf4a761 229 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 122 150 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 JDM601_3608 c94d08018cf3b64997d05076aaf4a761 229 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 109 125 9.9E-36 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3608 c94d08018cf3b64997d05076aaf4a761 229 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 173 9.9E-36 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3608 c94d08018cf3b64997d05076aaf4a761 229 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 184 204 9.9E-36 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3608 c94d08018cf3b64997d05076aaf4a761 229 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 135 154 9.9E-36 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3608 c94d08018cf3b64997d05076aaf4a761 229 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 62 73 9.9E-36 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3608 c94d08018cf3b64997d05076aaf4a761 229 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 1 220 2.0E-62 T 12-10-2018 JDM601_3608 c94d08018cf3b64997d05076aaf4a761 229 SUPERFAMILY SSF51735 1 221 5.44E-72 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_3608 c94d08018cf3b64997d05076aaf4a761 229 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 62 73 1.4E-11 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3608 c94d08018cf3b64997d05076aaf4a761 229 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 115 123 1.4E-11 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3608 c94d08018cf3b64997d05076aaf4a761 229 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 154 1.4E-11 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0810 ffb3f16ef17bafeb74adc32e32390a30 372 SUPERFAMILY SSF53383 18 371 9.98E-76 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase JDM601_0810 ffb3f16ef17bafeb74adc32e32390a30 372 Pfam PF00266 Aminotransferase class-V 37 331 7.5E-17 T 12-10-2018 IPR000192 Aminotransferase class V domain JDM601_0810 ffb3f16ef17bafeb74adc32e32390a30 372 Gene3D G3DSA:3.40.640.10 28 266 7.0E-63 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 JDM601_0810 ffb3f16ef17bafeb74adc32e32390a30 372 Hamap MF_00160 Phosphoserine aminotransferase [serC]. 6 372 25.186 T 12-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 JDM601_0810 ffb3f16ef17bafeb74adc32e32390a30 372 TIGRFAM TIGR01366 serC_3: putative phosphoserine aminotransferase 12 372 8.1E-213 T 12-10-2018 IPR006272 Phosphoserine aminotransferase, Mycobacterial-type GO:0004648|GO:0006564|GO:0009058 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52 JDM601_0810 ffb3f16ef17bafeb74adc32e32390a30 372 PIRSF PIRSF000525 2 372 3.5E-83 T 12-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 JDM601_0810 ffb3f16ef17bafeb74adc32e32390a30 372 Gene3D G3DSA:3.90.1150.10 268 372 3.8E-42 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 JDM601_3204 4368bd4295350326f2405b38f8b5dd99 315 SUPERFAMILY SSF50800 4 276 2.62E-14 T 12-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily JDM601_3204 4368bd4295350326f2405b38f8b5dd99 315 Pfam PF03473 MOSC domain 153 273 6.9E-7 T 12-10-2018 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 JDM601_0788 1a38586aa61da4f937dcbff9bbd5ac9d 141 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 6 90 2.1E-7 T 12-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 JDM601_0788 1a38586aa61da4f937dcbff9bbd5ac9d 141 SUPERFAMILY SSF50475 1 139 3.18E-20 T 12-10-2018 JDM601_0788 1a38586aa61da4f937dcbff9bbd5ac9d 141 Gene3D G3DSA:2.30.110.10 2 140 8.3E-21 T 12-10-2018 IPR012349 FMN-binding split barrel GO:0048037 JDM601_3818 d561c8b0371aadc9db55c3859ab50422 252 Pfam PF12697 Alpha/beta hydrolase family 1 239 1.2E-22 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 JDM601_3818 d561c8b0371aadc9db55c3859ab50422 252 SUPERFAMILY SSF53474 1 246 4.77E-38 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_3818 d561c8b0371aadc9db55c3859ab50422 252 PRINTS PR00111 Alpha/beta hydrolase fold signature 23 38 7.2E-5 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 JDM601_3818 d561c8b0371aadc9db55c3859ab50422 252 PRINTS PR00111 Alpha/beta hydrolase fold signature 67 80 7.2E-5 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 JDM601_3818 d561c8b0371aadc9db55c3859ab50422 252 Gene3D G3DSA:3.40.50.1820 1 247 1.8E-40 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_0299 84f07cc72dda97b90b8de8374bf9e111 453 Pfam PF00082 Subtilase family 71 380 7.4E-30 T 12-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 JDM601_0299 84f07cc72dda97b90b8de8374bf9e111 453 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 111 121 - T 12-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site JDM601_0299 84f07cc72dda97b90b8de8374bf9e111 453 PRINTS PR00723 Subtilisin serine protease family (S8) signature 330 346 2.5E-11 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related JDM601_0299 84f07cc72dda97b90b8de8374bf9e111 453 PRINTS PR00723 Subtilisin serine protease family (S8) signature 71 90 2.5E-11 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related JDM601_0299 84f07cc72dda97b90b8de8374bf9e111 453 PRINTS PR00723 Subtilisin serine protease family (S8) signature 107 120 2.5E-11 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related JDM601_0299 84f07cc72dda97b90b8de8374bf9e111 453 SUPERFAMILY SSF52743 56 389 1.23E-55 T 12-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 JDM601_0299 84f07cc72dda97b90b8de8374bf9e111 453 Gene3D G3DSA:3.40.50.200 9 393 4.4E-96 T 12-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 JDM601_0299 84f07cc72dda97b90b8de8374bf9e111 453 TIGRFAM TIGR03921 T7SS_mycosin: type VII secretion-associated serine protease mycosin 61 448 2.0E-114 T 12-10-2018 IPR023834 Type VII secretion system peptidase S8A, mycosin JDM601_2188 81f1848b1779f0979fd992142e041bb5 451 Pfam PF11798 IMS family HHH motif 171 200 3.0E-6 T 12-10-2018 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 JDM601_2188 81f1848b1779f0979fd992142e041bb5 451 Pfam PF11799 impB/mucB/samB family C-terminal domain 237 346 5.8E-18 T 12-10-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 JDM601_2188 81f1848b1779f0979fd992142e041bb5 451 Gene3D G3DSA:3.30.1490.100 245 350 3.4E-19 T 12-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 JDM601_2188 81f1848b1779f0979fd992142e041bb5 451 Pfam PF00817 impB/mucB/samB family 9 157 8.1E-36 T 12-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 JDM601_2188 81f1848b1779f0979fd992142e041bb5 451 SUPERFAMILY SSF100879 243 342 1.79E-22 T 12-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 JDM601_2188 81f1848b1779f0979fd992142e041bb5 451 Gene3D G3DSA:1.10.150.20 173 240 2.3E-18 T 12-10-2018 JDM601_2188 81f1848b1779f0979fd992142e041bb5 451 SUPERFAMILY SSF56672 4 241 2.58E-66 T 12-10-2018 JDM601_2188 81f1848b1779f0979fd992142e041bb5 451 Gene3D G3DSA:2.30.40.20 14 75 1.8E-21 T 12-10-2018 JDM601_2188 81f1848b1779f0979fd992142e041bb5 451 Hamap MF_01113 DNA polymerase IV [dinB]. 3 357 32.829 T 12-10-2018 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 JDM601_2188 81f1848b1779f0979fd992142e041bb5 451 Gene3D G3DSA:3.30.70.270 76 168 3.6E-25 T 12-10-2018 JDM601_0396 9d688b7490aa1bac36c38afe04fd4294 602 Gene3D G3DSA:1.20.1250.20 26 221 9.8E-26 T 12-10-2018 JDM601_0396 9d688b7490aa1bac36c38afe04fd4294 602 Pfam PF07690 Major Facilitator Superfamily 41 454 4.0E-40 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 JDM601_0396 9d688b7490aa1bac36c38afe04fd4294 602 Gene3D G3DSA:1.20.1250.20 313 569 7.2E-13 T 12-10-2018 JDM601_0396 9d688b7490aa1bac36c38afe04fd4294 602 SUPERFAMILY SSF103473 30 576 1.44E-50 T 12-10-2018 IPR036259 MFS transporter superfamily JDM601_2110 7f4710260d2093f0797b133989f9be28 375 Pfam PF01321 Creatinase/Prolidase N-terminal domain 15 147 1.1E-15 T 12-10-2018 IPR000587 Creatinase, N-terminal GO:0016787 JDM601_2110 7f4710260d2093f0797b133989f9be28 375 Pfam PF00557 Metallopeptidase family M24 155 357 3.8E-61 T 12-10-2018 IPR000994 Peptidase M24 JDM601_2110 7f4710260d2093f0797b133989f9be28 375 Gene3D G3DSA:3.40.350.10 3 144 3.1E-41 T 12-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal JDM601_2110 7f4710260d2093f0797b133989f9be28 375 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 303 315 - T 12-10-2018 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site JDM601_2110 7f4710260d2093f0797b133989f9be28 375 SUPERFAMILY SSF55920 146 373 4.84E-73 T 12-10-2018 IPR036005 Creatinase/aminopeptidase-like JDM601_2110 7f4710260d2093f0797b133989f9be28 375 Gene3D G3DSA:3.90.230.10 145 375 7.0E-81 T 12-10-2018 JDM601_2110 7f4710260d2093f0797b133989f9be28 375 SUPERFAMILY SSF53092 6 145 1.74E-19 T 12-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal JDM601_3636 0a242dca57b5137783004a8b48a3f7db 365 Gene3D G3DSA:2.40.110.10 121 221 1.9E-33 T 12-10-2018 JDM601_3636 0a242dca57b5137783004a8b48a3f7db 365 Gene3D G3DSA:1.20.140.10 222 365 4.3E-34 T 12-10-2018 JDM601_3636 0a242dca57b5137783004a8b48a3f7db 365 Gene3D G3DSA:1.10.540.10 1 120 8.3E-25 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 JDM601_3636 0a242dca57b5137783004a8b48a3f7db 365 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 7 117 3.8E-10 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 JDM601_3636 0a242dca57b5137783004a8b48a3f7db 365 SUPERFAMILY SSF47203 223 361 2.09E-30 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 JDM601_3636 0a242dca57b5137783004a8b48a3f7db 365 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 228 359 9.3E-24 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 JDM601_3636 0a242dca57b5137783004a8b48a3f7db 365 SUPERFAMILY SSF56645 1 213 1.96E-29 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 JDM601_0886 5ea0a465eb385481c6aa5cae14b8d7f9 289 Gene3D G3DSA:3.20.20.30 3 287 1.1E-58 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 JDM601_0886 5ea0a465eb385481c6aa5cae14b8d7f9 289 TIGRFAM TIGR03619 F420_Rv2161c: probable F420-dependent oxidoreductase, Rv2161c family 18 255 1.4E-50 T 12-10-2018 IPR019921 Luciferase-like, F420-dependent oxidoreductase, Rv2161c, predicted JDM601_0886 5ea0a465eb385481c6aa5cae14b8d7f9 289 SUPERFAMILY SSF51679 10 285 6.93E-52 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 JDM601_0886 5ea0a465eb385481c6aa5cae14b8d7f9 289 Pfam PF00296 Luciferase-like monooxygenase 9 227 1.3E-45 T 12-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 JDM601_3984 4d58a86f397e13c2daf0c07abd3d19ea 428 TIGRFAM TIGR03444 EgtA_Cys_ligase: ergothioneine biosynthesis glutamate--cysteine ligase EgtA 31 406 2.0E-156 T 12-10-2018 IPR017809 Glutamate--cysteine ligase EgtA, Actinobacteria GO:0004357|GO:0052699 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 JDM601_3984 4d58a86f397e13c2daf0c07abd3d19ea 428 Gene3D G3DSA:3.30.590.20 10 419 3.4E-100 T 12-10-2018 JDM601_3984 4d58a86f397e13c2daf0c07abd3d19ea 428 Hamap MF_02034 Glutamate--cysteine ligase EgtA [egtA]. 20 404 28.88 T 12-10-2018 IPR017809 Glutamate--cysteine ligase EgtA, Actinobacteria GO:0004357|GO:0052699 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 JDM601_3984 4d58a86f397e13c2daf0c07abd3d19ea 428 SUPERFAMILY SSF55931 39 374 7.06E-44 T 12-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 JDM601_3984 4d58a86f397e13c2daf0c07abd3d19ea 428 Pfam PF04107 Glutamate-cysteine ligase family 2(GCS2) 45 349 1.8E-72 T 12-10-2018 IPR006336 Glutamate--cysteine ligase, GCS2 GO:0004357|GO:0042398 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 JDM601_3984 4d58a86f397e13c2daf0c07abd3d19ea 428 PIRSF PIRSF017901 18 425 9.0E-107 T 12-10-2018 IPR035434 Glutamate--cysteine ligase, bacteria and plant GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 JDM601_3883 5af847f861be0855d3ebfba0d99fb46c 105 Pfam PF03992 Antibiotic biosynthesis monooxygenase 3 75 2.5E-19 T 12-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain JDM601_3883 5af847f861be0855d3ebfba0d99fb46c 105 SUPERFAMILY SSF54909 1 97 1.99E-24 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel JDM601_3883 5af847f861be0855d3ebfba0d99fb46c 105 Gene3D G3DSA:3.30.70.100 1 99 3.4E-40 T 12-10-2018 JDM601_0923 417c1eeeb8467b37bcb3403225fcfa43 199 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 60 1.8E-7 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_0923 417c1eeeb8467b37bcb3403225fcfa43 199 Gene3D G3DSA:1.10.357.10 5 188 5.1E-21 T 12-10-2018 JDM601_0923 417c1eeeb8467b37bcb3403225fcfa43 199 SUPERFAMILY SSF46689 6 74 9.75E-12 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JDM601_2841 6512cf246ea3889e123508265ae03642 297 Gene3D G3DSA:3.30.70.3040 43 157 2.0E-43 T 12-10-2018 JDM601_2841 6512cf246ea3889e123508265ae03642 297 PIRSF PIRSF003097 1 297 7.6E-55 T 12-10-2018 IPR004513 Cell division protein FtsX GO:0016021 JDM601_2841 6512cf246ea3889e123508265ae03642 297 Pfam PF02687 FtsX-like permease family 200 288 4.1E-8 T 12-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 JDM601_4243 8ae192cfbd71cef3a1357aa4c6fa22c1 213 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 63 2.8E-11 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_4243 8ae192cfbd71cef3a1357aa4c6fa22c1 213 SUPERFAMILY SSF46689 3 84 1.69E-14 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JDM601_4243 8ae192cfbd71cef3a1357aa4c6fa22c1 213 Gene3D G3DSA:1.10.357.10 13 204 3.1E-30 T 12-10-2018 JDM601_1531 bd52d8e4c73353a2d5a17d7f2d426a7c 86 SUPERFAMILY SSF47336 7 83 2.88E-14 T 12-10-2018 IPR036736 ACP-like superfamily JDM601_1531 bd52d8e4c73353a2d5a17d7f2d426a7c 86 Gene3D G3DSA:1.10.1200.10 5 81 3.4E-15 T 12-10-2018 IPR036736 ACP-like superfamily JDM601_1531 bd52d8e4c73353a2d5a17d7f2d426a7c 86 Pfam PF00550 Phosphopantetheine attachment site 12 78 2.3E-13 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain JDM601_0747 cbb478a9d775260c3b133b3fb8e79145 432 Pfam PF02515 CoA-transferase family III 163 278 1.3E-24 T 12-10-2018 IPR003673 CoA-transferase family III GO:0003824 JDM601_0747 cbb478a9d775260c3b133b3fb8e79145 432 SUPERFAMILY SSF89796 5 139 3.92E-6 T 12-10-2018 IPR023606 CoA-transferase family III domain superfamily JDM601_0747 cbb478a9d775260c3b133b3fb8e79145 432 SUPERFAMILY SSF89796 162 279 1.44E-27 T 12-10-2018 IPR023606 CoA-transferase family III domain superfamily JDM601_2094 486db24cc2b1c932fffd5fd6fd93542f 193 Pfam PF00857 Isochorismatase family 6 188 2.3E-27 T 12-10-2018 IPR000868 Isochorismatase-like GO:0003824 JDM601_2094 486db24cc2b1c932fffd5fd6fd93542f 193 SUPERFAMILY SSF52499 5 188 3.53E-44 T 12-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 JDM601_2094 486db24cc2b1c932fffd5fd6fd93542f 193 Gene3D G3DSA:3.40.50.850 4 189 5.2E-60 T 12-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 JDM601_2877 6400c7e4b5a9207a1ad1854c4a6e246c 231 Gene3D G3DSA:3.40.50.10320 6 225 7.7E-53 T 12-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 JDM601_2877 6400c7e4b5a9207a1ad1854c4a6e246c 231 SUPERFAMILY SSF102588 14 192 1.31E-32 T 12-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 JDM601_2877 6400c7e4b5a9207a1ad1854c4a6e246c 231 Pfam PF02585 GlcNAc-PI de-N-acetylase 18 148 1.4E-22 T 12-10-2018 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related Reactome: R-HSA-162710 JDM601_0453 0109c3187c08af2d157e08f0c5b6bd83 485 Pfam PF01940 Integral membrane protein DUF92 243 471 3.3E-42 T 12-10-2018 IPR002794 Protein of unknown function DUF92, TMEM19 GO:0016021 JDM601_0676 5926c8e49353713b0b22b4197965ffc9 134 Pfam PF08592 Domain of unknown function (DUF1772) 11 132 7.4E-12 T 12-10-2018 JDM601_3197 055f85582bd4d1b2482b5b465756b592 197 Gene3D G3DSA:3.40.50.300 12 195 6.5E-18 T 12-10-2018 JDM601_3197 055f85582bd4d1b2482b5b465756b592 197 SUPERFAMILY SSF52540 18 187 2.12E-21 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_3197 055f85582bd4d1b2482b5b465756b592 197 Pfam PF03029 Conserved hypothetical ATP binding protein 22 189 6.6E-26 T 12-10-2018 IPR004130 GPN-loop GTPase JDM601_0145 7ca84a68c1407c149b36350c41a1a505 358 Pfam PF09992 Phosphodiester glycosidase 168 334 5.8E-7 T 12-10-2018 IPR018711 Phosphodiester glycosidase JDM601_1598 ffb3afdf16c6f77827b785d036a852f8 386 Gene3D G3DSA:1.20.1260.20 2 175 5.8E-71 T 12-10-2018 IPR038332 PPE superfamily JDM601_1598 ffb3afdf16c6f77827b785d036a852f8 386 SUPERFAMILY SSF140459 3 174 7.59E-64 T 12-10-2018 JDM601_1598 ffb3afdf16c6f77827b785d036a852f8 386 Pfam PF00823 PPE family 6 162 2.4E-63 T 12-10-2018 IPR000030 PPE family JDM601_1598 ffb3afdf16c6f77827b785d036a852f8 386 Pfam PF12484 Polymorphic PE/PPE proteins C terminal 295 382 3.2E-12 T 12-10-2018 IPR022171 PPE family, C-terminal JDM601_0970 40a3890c6a2e553bd396e407ba66d77c 544 Gene3D G3DSA:3.30.300.30 437 542 2.4E-23 T 12-10-2018 JDM601_0970 40a3890c6a2e553bd396e407ba66d77c 544 Pfam PF00501 AMP-binding enzyme 24 442 1.8E-68 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 JDM601_0970 40a3890c6a2e553bd396e407ba66d77c 544 SUPERFAMILY SSF56801 23 537 1.03E-96 T 12-10-2018 JDM601_0970 40a3890c6a2e553bd396e407ba66d77c 544 ProSitePatterns PS00455 Putative AMP-binding domain signature. 157 168 - T 12-10-2018 IPR020845 AMP-binding, conserved site JDM601_0970 40a3890c6a2e553bd396e407ba66d77c 544 Gene3D G3DSA:3.40.50.12780 4 436 1.1E-108 T 12-10-2018 JDM601_2734 56883acc08461f916123ff3aa0f29973 468 Hamap MF_00120 Glutamyl-tRNA(Gln) amidotransferase subunit A [gatA]. 2 462 87.065 T 12-10-2018 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412|GO:0030956|GO:0050567 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 JDM601_2734 56883acc08461f916123ff3aa0f29973 468 SUPERFAMILY SSF75304 1 465 1.05E-146 T 12-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 JDM601_2734 56883acc08461f916123ff3aa0f29973 468 Pfam PF01425 Amidase 1 450 1.4E-156 T 12-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 JDM601_2734 56883acc08461f916123ff3aa0f29973 468 ProSitePatterns PS00571 Amidases signature. 128 159 - T 12-10-2018 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921|Reactome: R-HSA-2142753 JDM601_2734 56883acc08461f916123ff3aa0f29973 468 TIGRFAM TIGR00132 gatA: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit 2 460 9.5E-185 T 12-10-2018 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412|GO:0030956|GO:0050567 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 JDM601_2734 56883acc08461f916123ff3aa0f29973 468 Gene3D G3DSA:3.90.1300.10 1 463 7.3E-172 T 12-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 JDM601_4160 1cfee0249d4addfdfb7de1a0dc28677d 229 Pfam PF01169 Uncharacterized protein family UPF0016 7 80 6.8E-20 T 12-10-2018 IPR001727 Gdt1 family JDM601_4160 1cfee0249d4addfdfb7de1a0dc28677d 229 Pfam PF01169 Uncharacterized protein family UPF0016 106 179 7.8E-20 T 12-10-2018 IPR001727 Gdt1 family JDM601_1375 d23c60ff620e770de6921974a2cb6508 128 Pfam PF05305 Protein of unknown function (DUF732) 21 128 4.5E-6 T 12-10-2018 IPR007969 Domain of unknown function DUF732 JDM601_0910 192d70c1de72f4712c3f18af1c1a6794 659 SUPERFAMILY SSF53300 468 620 2.08E-14 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily JDM601_0910 192d70c1de72f4712c3f18af1c1a6794 659 Gene3D G3DSA:3.40.50.410 463 644 8.3E-13 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily JDM601_0910 192d70c1de72f4712c3f18af1c1a6794 659 SMART SM00327 466 654 4.0E-12 T 12-10-2018 IPR002035 von Willebrand factor, type A JDM601_1646 9091be3b5eaf8fc6e4cb270ae09e4af8 292 SUPERFAMILY SSF53850 96 278 3.94E-17 T 12-10-2018 JDM601_1646 9091be3b5eaf8fc6e4cb270ae09e4af8 292 Gene3D G3DSA:3.40.190.10 167 270 2.1E-19 T 12-10-2018 JDM601_1646 9091be3b5eaf8fc6e4cb270ae09e4af8 292 Pfam PF03466 LysR substrate binding domain 98 286 1.5E-15 T 12-10-2018 IPR005119 LysR, substrate-binding JDM601_1646 9091be3b5eaf8fc6e4cb270ae09e4af8 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 5.9E-9 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JDM601_1646 9091be3b5eaf8fc6e4cb270ae09e4af8 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 5.9E-9 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JDM601_1646 9091be3b5eaf8fc6e4cb270ae09e4af8 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 5.9E-9 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JDM601_1646 9091be3b5eaf8fc6e4cb270ae09e4af8 292 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 1.9E-20 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JDM601_1646 9091be3b5eaf8fc6e4cb270ae09e4af8 292 SUPERFAMILY SSF46785 3 82 3.77E-20 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JDM601_1646 9091be3b5eaf8fc6e4cb270ae09e4af8 292 Gene3D G3DSA:3.40.190.10 99 287 2.1E-19 T 12-10-2018 JDM601_1646 9091be3b5eaf8fc6e4cb270ae09e4af8 292 Gene3D G3DSA:1.10.10.10 5 91 2.3E-24 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JDM601_3830 0202aebf0a6c12b406bc92e38b6f8543 213 SUPERFAMILY SSF46689 4 83 8.21E-17 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JDM601_3830 0202aebf0a6c12b406bc92e38b6f8543 213 Gene3D G3DSA:1.10.10.60 3 56 2.1E-16 T 12-10-2018 JDM601_3830 0202aebf0a6c12b406bc92e38b6f8543 213 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 36 59 9.9E-8 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_3830 0202aebf0a6c12b406bc92e38b6f8543 213 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 15 28 9.9E-8 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_3830 0202aebf0a6c12b406bc92e38b6f8543 213 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 61 6.8E-14 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_3830 0202aebf0a6c12b406bc92e38b6f8543 213 Gene3D G3DSA:1.10.357.10 57 202 8.2E-14 T 12-10-2018 JDM601_2924 a0e8a451247e965f9d7208d2085df493 85 Pfam PF11305 Protein of unknown function (DUF3107) 1 73 8.1E-30 T 12-10-2018 IPR021456 Protein of unknown function DUF3107 JDM601_0606 0dae1074c1576ec227b7d71c330c3179 164 Pfam PF10722 Putative bacterial sensory transduction regulator 33 146 3.8E-13 T 12-10-2018 IPR019660 Putative sensory transduction regulator YbjN JDM601_0606 0dae1074c1576ec227b7d71c330c3179 164 SUPERFAMILY SSF69635 20 150 1.88E-9 T 12-10-2018 JDM601_0606 0dae1074c1576ec227b7d71c330c3179 164 Gene3D G3DSA:3.30.1460.10 27 158 2.1E-6 T 12-10-2018 JDM601_2030 7c6bc5333be162a59aad8155c0d3df66 186 SUPERFAMILY SSF109854 7 125 8.7E-8 T 12-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes JDM601_2030 7c6bc5333be162a59aad8155c0d3df66 186 Pfam PF11716 Mycothiol maleylpyruvate isomerase N-terminal domain 7 122 2.4E-5 T 12-10-2018 IPR024344 Mycothiol-dependent maleylpyruvate isomerase, metal-binding domain GO:0046872 JDM601_2030 7c6bc5333be162a59aad8155c0d3df66 186 TIGRFAM TIGR03083 TIGR03083: uncharacterized Actinobacterial protein TIGR03083 7 185 3.8E-14 T 12-10-2018 IPR017517 Conserved hypothetical protein CHP03083, actinobacterial-type JDM601_0242 4067b8d7665d78632a24f47fbdb1b4ce 448 Gene3D G3DSA:1.20.1250.20 1 199 9.1E-47 T 12-10-2018 JDM601_0242 4067b8d7665d78632a24f47fbdb1b4ce 448 SUPERFAMILY SSF103473 12 433 1.57E-27 T 12-10-2018 IPR036259 MFS transporter superfamily JDM601_0242 4067b8d7665d78632a24f47fbdb1b4ce 448 Pfam PF07690 Major Facilitator Superfamily 26 360 4.0E-13 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 JDM601_0242 4067b8d7665d78632a24f47fbdb1b4ce 448 Gene3D G3DSA:1.20.1250.20 200 438 4.1E-60 T 12-10-2018 JDM601_2155 74ff39856f3df31e73b1abb1b678cd41 445 Pfam PF03583 Secretory lipase 129 403 8.3E-79 T 12-10-2018 IPR005152 Lipase, secreted GO:0004806|GO:0016042 JDM601_2155 74ff39856f3df31e73b1abb1b678cd41 445 PIRSF PIRSF029171 15 406 9.4E-32 T 12-10-2018 IPR005152 Lipase, secreted GO:0004806|GO:0016042 JDM601_2155 74ff39856f3df31e73b1abb1b678cd41 445 SUPERFAMILY SSF53474 92 398 2.42E-20 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_2155 74ff39856f3df31e73b1abb1b678cd41 445 Gene3D G3DSA:1.10.260.130 236 327 9.1E-114 T 12-10-2018 JDM601_2155 74ff39856f3df31e73b1abb1b678cd41 445 Gene3D G3DSA:3.40.50.1820 32 400 9.1E-114 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_1537 980c68c93a57ebb29b48306f41a9c4ff 199 Pfam PF11259 Protein of unknown function (DUF3060) 136 192 6.2E-21 T 12-10-2018 IPR021417 Protein of unknown function DUF3060 JDM601_3301 d211b5483c2bd95779d327499078067e 443 Hamap MF_01465 Protein translocase subunit SecY [secY]. 5 442 29.218 T 12-10-2018 IPR026593 Protein translocase subunit SecY JDM601_3301 d211b5483c2bd95779d327499078067e 443 Gene3D G3DSA:1.10.3370.10 1 438 3.5E-158 T 12-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 JDM601_3301 d211b5483c2bd95779d327499078067e 443 PIRSF PIRSF004557 1 443 5.4E-117 T 12-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 JDM601_3301 d211b5483c2bd95779d327499078067e 443 ProSitePatterns PS00756 Protein secY signature 2. 178 195 - T 12-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 JDM601_3301 d211b5483c2bd95779d327499078067e 443 SUPERFAMILY SSF103491 3 433 3.53E-120 T 12-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 JDM601_3301 d211b5483c2bd95779d327499078067e 443 Pfam PF00344 SecY translocase 75 426 3.3E-114 T 12-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 JDM601_3301 d211b5483c2bd95779d327499078067e 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 272 291 5.5E-101 T 12-10-2018 JDM601_3301 d211b5483c2bd95779d327499078067e 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 375 393 5.5E-101 T 12-10-2018 JDM601_3301 d211b5483c2bd95779d327499078067e 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 74 94 5.5E-101 T 12-10-2018 JDM601_3301 d211b5483c2bd95779d327499078067e 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 159 184 5.5E-101 T 12-10-2018 JDM601_3301 d211b5483c2bd95779d327499078067e 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 320 342 5.5E-101 T 12-10-2018 JDM601_3301 d211b5483c2bd95779d327499078067e 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 411 429 5.5E-101 T 12-10-2018 JDM601_3301 d211b5483c2bd95779d327499078067e 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 115 138 5.5E-101 T 12-10-2018 JDM601_3301 d211b5483c2bd95779d327499078067e 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 18 36 5.5E-101 T 12-10-2018 JDM601_3301 d211b5483c2bd95779d327499078067e 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 185 208 5.5E-101 T 12-10-2018 JDM601_3301 d211b5483c2bd95779d327499078067e 443 ProSitePatterns PS00755 Protein secY signature 1. 75 94 - T 12-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 JDM601_3301 d211b5483c2bd95779d327499078067e 443 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 15 438 2.0E-129 T 12-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 JDM601_3428 191e41d9d8fc0699ad36d1cfeeeae7fb 240 Gene3D G3DSA:3.90.226.10 1 240 9.4E-62 T 12-10-2018 JDM601_3428 191e41d9d8fc0699ad36d1cfeeeae7fb 240 SUPERFAMILY SSF52096 2 238 3.98E-57 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily JDM601_3428 191e41d9d8fc0699ad36d1cfeeeae7fb 240 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 95 115 - T 12-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 JDM601_3428 191e41d9d8fc0699ad36d1cfeeeae7fb 240 Pfam PF00378 Enoyl-CoA hydratase/isomerase 7 202 2.0E-42 T 12-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 JDM601_1635 4aa008b2e4e2b8a97a7832c58c2f0bef 207 Pfam PF00753 Metallo-beta-lactamase superfamily 24 186 5.1E-24 T 12-10-2018 IPR001279 Metallo-beta-lactamase JDM601_1635 4aa008b2e4e2b8a97a7832c58c2f0bef 207 SMART SM00849 23 186 4.9E-39 T 12-10-2018 IPR001279 Metallo-beta-lactamase JDM601_1635 4aa008b2e4e2b8a97a7832c58c2f0bef 207 Gene3D G3DSA:3.60.15.10 19 204 6.0E-45 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like JDM601_1635 4aa008b2e4e2b8a97a7832c58c2f0bef 207 SUPERFAMILY SSF56281 9 199 1.9E-46 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like JDM601_1306 092dea9a3ad4992196156e6b7da86a73 445 Hamap MF_01416 ATP synthase subunit delta [atpD]. 266 445 13.274 T 12-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 JDM601_1306 092dea9a3ad4992196156e6b7da86a73 445 Pfam PF00430 ATP synthase B/B' CF(0) 3 132 3.5E-18 T 12-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 JDM601_1306 092dea9a3ad4992196156e6b7da86a73 445 Pfam PF00213 ATP synthase delta (OSCP) subunit 277 443 2.1E-28 T 12-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 JDM601_1306 092dea9a3ad4992196156e6b7da86a73 445 Hamap MF_01398 ATP synthase subunit b [atpF]. 1 135 9.986 T 12-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 JDM601_1306 092dea9a3ad4992196156e6b7da86a73 445 SUPERFAMILY SSF81573 61 118 4.32E-6 T 12-10-2018 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily JDM601_0315 4f6f150e22154b2afffe823f1367beeb 213 Pfam PF00440 Bacterial regulatory proteins, tetR family 22 68 7.8E-13 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_0315 4f6f150e22154b2afffe823f1367beeb 213 SUPERFAMILY SSF46689 20 81 1.8E-12 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JDM601_0315 4f6f150e22154b2afffe823f1367beeb 213 Gene3D G3DSA:1.10.357.10 10 207 1.5E-17 T 12-10-2018 JDM601_0315 4f6f150e22154b2afffe823f1367beeb 213 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 22 35 2.1E-6 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_0315 4f6f150e22154b2afffe823f1367beeb 213 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 43 66 2.1E-6 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_1810 1fc6e139a778f1fab14108dc7113f7da 447 Gene3D G3DSA:1.20.1250.20 250 440 7.5E-8 T 12-10-2018 JDM601_1810 1fc6e139a778f1fab14108dc7113f7da 447 Pfam PF07690 Major Facilitator Superfamily 4 396 9.6E-34 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 JDM601_1810 1fc6e139a778f1fab14108dc7113f7da 447 SUPERFAMILY SSF103473 3 436 3.79E-32 T 12-10-2018 IPR036259 MFS transporter superfamily JDM601_1810 1fc6e139a778f1fab14108dc7113f7da 447 Gene3D G3DSA:1.20.1250.20 1 185 4.6E-23 T 12-10-2018 JDM601_0325 289c7908468829436750fc246633a8c5 252 TIGRFAM TIGR03083 TIGR03083: uncharacterized Actinobacterial protein TIGR03083 7 226 6.0E-32 T 12-10-2018 IPR017517 Conserved hypothetical protein CHP03083, actinobacterial-type JDM601_0325 289c7908468829436750fc246633a8c5 252 Pfam PF07398 MDMPI C-terminal domain 142 244 4.9E-17 T 12-10-2018 IPR010872 MDMPI C-terminal JDM601_0325 289c7908468829436750fc246633a8c5 252 SUPERFAMILY SSF109854 2 134 1.16E-6 T 12-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes JDM601_0325 289c7908468829436750fc246633a8c5 252 Pfam PF11716 Mycothiol maleylpyruvate isomerase N-terminal domain 6 130 4.9E-22 T 12-10-2018 IPR024344 Mycothiol-dependent maleylpyruvate isomerase, metal-binding domain GO:0046872 JDM601_3768 04dd9f0db6afd16076885d8f9dff6212 277 Gene3D G3DSA:3.40.50.720 4 275 6.3E-63 T 12-10-2018 JDM601_3768 04dd9f0db6afd16076885d8f9dff6212 277 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 96 107 2.2E-9 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3768 04dd9f0db6afd16076885d8f9dff6212 277 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 169 188 2.2E-9 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3768 04dd9f0db6afd16076885d8f9dff6212 277 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 149 157 2.2E-9 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3768 04dd9f0db6afd16076885d8f9dff6212 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 96 107 2.0E-31 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3768 04dd9f0db6afd16076885d8f9dff6212 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 2.0E-31 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3768 04dd9f0db6afd16076885d8f9dff6212 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 143 159 2.0E-31 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3768 04dd9f0db6afd16076885d8f9dff6212 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 190 207 2.0E-31 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3768 04dd9f0db6afd16076885d8f9dff6212 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 238 258 2.0E-31 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3768 04dd9f0db6afd16076885d8f9dff6212 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 169 188 2.0E-31 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3768 04dd9f0db6afd16076885d8f9dff6212 277 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 273 6.4E-46 T 12-10-2018 JDM601_3768 04dd9f0db6afd16076885d8f9dff6212 277 SUPERFAMILY SSF51735 6 273 7.83E-64 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_2547 b5ea1537e6bcd95a6a6097033dd0043d 202 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 62 3.4E-14 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_2547 b5ea1537e6bcd95a6a6097033dd0043d 202 SUPERFAMILY SSF46689 2 81 5.49E-19 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JDM601_2547 b5ea1537e6bcd95a6a6097033dd0043d 202 Gene3D G3DSA:1.10.357.10 1 199 4.1E-27 T 12-10-2018 JDM601_2547 b5ea1537e6bcd95a6a6097033dd0043d 202 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 6.0E-8 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_2547 b5ea1537e6bcd95a6a6097033dd0043d 202 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 6.0E-8 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_1839 902e2591d9a5c12685268306b412f656 217 SUPERFAMILY SSF55166 62 215 3.69E-30 T 12-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 JDM601_1839 902e2591d9a5c12685268306b412f656 217 Pfam PF13539 D-alanyl-D-alanine carboxypeptidase 137 215 3.3E-21 T 12-10-2018 IPR039561 Peptidase M15C GO:0008233 JDM601_1839 902e2591d9a5c12685268306b412f656 217 Gene3D G3DSA:3.30.1380.10 74 215 4.2E-16 T 12-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 JDM601_3353 fdf65db4f98dae89ae3b849cd79d118a 127 Pfam PF12680 SnoaL-like domain 19 116 1.3E-10 T 12-10-2018 IPR037401 SnoaL-like domain JDM601_3353 fdf65db4f98dae89ae3b849cd79d118a 127 SUPERFAMILY SSF54427 9 119 1.22E-14 T 12-10-2018 IPR032710 NTF2-like domain superfamily JDM601_3353 fdf65db4f98dae89ae3b849cd79d118a 127 Gene3D G3DSA:3.10.450.50 2 125 4.4E-18 T 12-10-2018 JDM601_3661 d5342d676ffb663f1b932bbfc08c3181 354 Gene3D G3DSA:3.40.47.10 2 351 1.8E-40 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 JDM601_3661 d5342d676ffb663f1b932bbfc08c3181 354 SUPERFAMILY SSF53901 227 342 1.06E-11 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 JDM601_3661 d5342d676ffb663f1b932bbfc08c3181 354 SUPERFAMILY SSF53901 2 224 7.21E-12 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 JDM601_1109 7b4647fe9ace04c95ccba5509189aded 269 SUPERFAMILY SSF52540 26 218 6.21E-30 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_1109 7b4647fe9ace04c95ccba5509189aded 269 Pfam PF07728 AAA domain (dynein-related subfamily) 35 168 2.7E-31 T 12-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 JDM601_1109 7b4647fe9ace04c95ccba5509189aded 269 Pfam PF08406 CbbQ/NirQ/NorQ C-terminal 181 263 3.2E-25 T 12-10-2018 IPR013615 CbbQ/NirQ/NorQ, C-terminal JDM601_1109 7b4647fe9ace04c95ccba5509189aded 269 Gene3D G3DSA:3.40.50.300 19 186 9.1E-28 T 12-10-2018 JDM601_3880 69fc1c0337082af17d89b6319c223387 207 Gene3D G3DSA:3.40.1050.10 1 207 9.8E-78 T 12-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 JDM601_3880 69fc1c0337082af17d89b6319c223387 207 Pfam PF00484 Carbonic anhydrase 46 194 3.9E-37 T 12-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 JDM601_3880 69fc1c0337082af17d89b6319c223387 207 SUPERFAMILY SSF53056 3 198 6.67E-52 T 12-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 JDM601_3880 69fc1c0337082af17d89b6319c223387 207 SMART SM00947 39 198 4.9E-50 T 12-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 JDM601_1148 00f1ac2bde0a9fcff576eecc0a76c950 130 Gene3D G3DSA:3.90.79.10 1 130 4.5E-27 T 12-10-2018 JDM601_1148 00f1ac2bde0a9fcff576eecc0a76c950 130 Pfam PF00293 NUDIX domain 6 124 3.1E-15 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 JDM601_1148 00f1ac2bde0a9fcff576eecc0a76c950 130 ProSitePatterns PS00893 Nudix box signature. 37 58 - T 12-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 JDM601_1148 00f1ac2bde0a9fcff576eecc0a76c950 130 SUPERFAMILY SSF55811 4 128 2.44E-26 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 JDM601_1148 00f1ac2bde0a9fcff576eecc0a76c950 130 PRINTS PR00502 NUDIX hydrolase family signature 46 61 3.6E-6 T 12-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 JDM601_1148 00f1ac2bde0a9fcff576eecc0a76c950 130 PRINTS PR00502 NUDIX hydrolase family signature 32 46 3.6E-6 T 12-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 JDM601_0958 82dfc49a1fcd38263131fd7a9b1f4a69 417 SUPERFAMILY SSF56322 74 407 1.23E-91 T 12-10-2018 IPR005801 ADC synthase GO:0009058 JDM601_0958 82dfc49a1fcd38263131fd7a9b1f4a69 417 PRINTS PR00095 Anthranilate synthase component I signature 261 274 6.5E-11 T 12-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 JDM601_0958 82dfc49a1fcd38263131fd7a9b1f4a69 417 PRINTS PR00095 Anthranilate synthase component I signature 341 355 6.5E-11 T 12-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 JDM601_0958 82dfc49a1fcd38263131fd7a9b1f4a69 417 PRINTS PR00095 Anthranilate synthase component I signature 356 370 6.5E-11 T 12-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 JDM601_0958 82dfc49a1fcd38263131fd7a9b1f4a69 417 PRINTS PR00095 Anthranilate synthase component I signature 247 260 6.5E-11 T 12-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 JDM601_0958 82dfc49a1fcd38263131fd7a9b1f4a69 417 Pfam PF00425 chorismate binding enzyme 153 400 7.5E-71 T 12-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal JDM601_0958 82dfc49a1fcd38263131fd7a9b1f4a69 417 TIGRFAM TIGR00553 pabB: aminodeoxychorismate synthase, component I 79 404 1.1E-108 T 12-10-2018 IPR005802 Para-aminobenzoate synthase, component I GO:0009396 KEGG: 00790+2.6.1.85|MetaCyc: PWY-6543 JDM601_0958 82dfc49a1fcd38263131fd7a9b1f4a69 417 Gene3D G3DSA:3.60.120.10 53 410 2.0E-94 T 12-10-2018 IPR005801 ADC synthase GO:0009058 JDM601_3117 26a177d67d358dd5250052787c0fecd6 496 Gene3D G3DSA:3.60.110.10 249 460 6.0E-10 T 12-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily JDM601_3117 26a177d67d358dd5250052787c0fecd6 496 SUPERFAMILY SSF56317 257 459 6.28E-13 T 12-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily JDM601_0322 a352d15ec37557f508f424b8424e3247 190 Pfam PF00692 dUTPase 68 178 2.2E-12 T 12-10-2018 IPR029054 dUTPase-like JDM601_0322 a352d15ec37557f508f424b8424e3247 190 SUPERFAMILY SSF51283 2 184 2.49E-56 T 12-10-2018 IPR036157 dUTPase-like superfamily JDM601_0322 a352d15ec37557f508f424b8424e3247 190 Hamap MF_00146 dCTP deaminase [dcd]. 1 182 34.702 T 12-10-2018 IPR011962 dCTP deaminase GO:0006229|GO:0008829 JDM601_0322 a352d15ec37557f508f424b8424e3247 190 TIGRFAM TIGR02274 dCTP_deam: deoxycytidine triphosphate deaminase 3 181 1.4E-64 T 12-10-2018 IPR011962 dCTP deaminase GO:0006229|GO:0008829 JDM601_0322 a352d15ec37557f508f424b8424e3247 190 Gene3D G3DSA:2.70.40.10 1 186 9.1E-59 T 12-10-2018 IPR036157 dUTPase-like superfamily JDM601_3278 a1070642aafeef1f80326d96c83c478d 240 Gene3D G3DSA:3.30.70.580 1 82 2.1E-15 T 12-10-2018 JDM601_3278 a1070642aafeef1f80326d96c83c478d 240 Pfam PF01416 tRNA pseudouridine synthase 121 222 1.3E-21 T 12-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 JDM601_3278 a1070642aafeef1f80326d96c83c478d 240 PIRSF PIRSF001430 1 238 2.5E-54 T 12-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 JDM601_3278 a1070642aafeef1f80326d96c83c478d 240 Gene3D G3DSA:3.30.70.660 83 220 9.4E-37 T 12-10-2018 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0003723|GO:0009982 JDM601_3278 a1070642aafeef1f80326d96c83c478d 240 SUPERFAMILY SSF55120 3 226 1.15E-56 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 JDM601_3535 e9812fcc4223336e50e5dd5af2b03afc 254 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JDM601_3535 e9812fcc4223336e50e5dd5af2b03afc 254 SMART SM00382 25 219 3.8E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain JDM601_3535 e9812fcc4223336e50e5dd5af2b03afc 254 SUPERFAMILY SSF52540 1 241 9.91E-58 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_3535 e9812fcc4223336e50e5dd5af2b03afc 254 Gene3D G3DSA:3.40.50.300 1 252 3.7E-62 T 12-10-2018 JDM601_3535 e9812fcc4223336e50e5dd5af2b03afc 254 Pfam PF00005 ABC transporter 17 172 1.2E-29 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JDM601_3535 e9812fcc4223336e50e5dd5af2b03afc 254 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 2 254 6.6E-113 T 12-10-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 JDM601_1214 7e916897d56754e2aaaff34a2438fba7 287 Gene3D G3DSA:3.40.190.10 36 283 2.8E-24 T 12-10-2018 JDM601_1214 7e916897d56754e2aaaff34a2438fba7 287 SUPERFAMILY SSF53850 34 285 1.04E-22 T 12-10-2018 JDM601_1214 7e916897d56754e2aaaff34a2438fba7 287 Gene3D G3DSA:3.40.190.120 129 227 2.8E-24 T 12-10-2018 JDM601_1214 7e916897d56754e2aaaff34a2438fba7 287 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 33 282 2.8E-21 T 12-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 JDM601_2750 187f2c8610972f50c7763d31614f657a 245 Gene3D G3DSA:3.40.50.150 18 200 1.9E-35 T 12-10-2018 JDM601_2750 187f2c8610972f50c7763d31614f657a 245 Pfam PF08241 Methyltransferase domain 38 129 4.9E-23 T 12-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 JDM601_2750 187f2c8610972f50c7763d31614f657a 245 SUPERFAMILY SSF53335 16 184 8.59E-36 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JDM601_2426 f941d34918922225ef84cce8655cd4ee 420 Gene3D G3DSA:1.10.150.80 324 418 2.0E-28 T 12-10-2018 JDM601_2426 f941d34918922225ef84cce8655cd4ee 420 Gene3D G3DSA:3.30.420.10 10 219 6.4E-66 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 JDM601_2426 f941d34918922225ef84cce8655cd4ee 420 Pfam PF01612 3'-5' exonuclease 37 196 2.2E-32 T 12-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 JDM601_2426 f941d34918922225ef84cce8655cd4ee 420 SUPERFAMILY SSF47819 223 315 1.26E-22 T 12-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 JDM601_2426 f941d34918922225ef84cce8655cd4ee 420 Pfam PF00570 HRDC domain 241 307 7.7E-16 T 12-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 JDM601_2426 f941d34918922225ef84cce8655cd4ee 420 SMART SM00341 237 317 1.1E-24 T 12-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 JDM601_2426 f941d34918922225ef84cce8655cd4ee 420 Gene3D G3DSA:1.10.150.80 221 317 9.6E-25 T 12-10-2018 JDM601_2426 f941d34918922225ef84cce8655cd4ee 420 SMART SM00474 26 197 7.4E-33 T 12-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 JDM601_2426 f941d34918922225ef84cce8655cd4ee 420 SUPERFAMILY SSF53098 9 235 4.3E-50 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily JDM601_3640 beb1ce29fb7b8ba95f53a23da1ce6d8c 597 SUPERFAMILY SSF52402 187 547 1.83E-25 T 12-10-2018 JDM601_3640 beb1ce29fb7b8ba95f53a23da1ce6d8c 597 Pfam PF00733 Asparagine synthase 198 569 2.1E-25 T 12-10-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 JDM601_3640 beb1ce29fb7b8ba95f53a23da1ce6d8c 597 SUPERFAMILY SSF56235 30 180 3.95E-19 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal JDM601_3640 beb1ce29fb7b8ba95f53a23da1ce6d8c 597 PIRSF PIRSF001589 39 587 2.2E-37 T 12-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 JDM601_3640 beb1ce29fb7b8ba95f53a23da1ce6d8c 597 Gene3D G3DSA:3.60.20.10 25 182 1.1E-16 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal JDM601_3692 a6eee8b668a3454a521d57317492eef2 415 SUPERFAMILY SSF48264 19 399 3.14E-75 T 12-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_3692 a6eee8b668a3454a521d57317492eef2 415 Gene3D G3DSA:1.10.630.10 2 412 2.6E-119 T 12-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_3692 a6eee8b668a3454a521d57317492eef2 415 PRINTS PR00359 B-class P450 signature 204 226 6.3E-44 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3692 a6eee8b668a3454a521d57317492eef2 415 PRINTS PR00359 B-class P450 signature 283 294 6.3E-44 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3692 a6eee8b668a3454a521d57317492eef2 415 PRINTS PR00359 B-class P450 signature 359 370 6.3E-44 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3692 a6eee8b668a3454a521d57317492eef2 415 PRINTS PR00359 B-class P450 signature 350 359 6.3E-44 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3692 a6eee8b668a3454a521d57317492eef2 415 PRINTS PR00359 B-class P450 signature 328 343 6.3E-44 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3692 a6eee8b668a3454a521d57317492eef2 415 PRINTS PR00359 B-class P450 signature 101 112 6.3E-44 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3692 a6eee8b668a3454a521d57317492eef2 415 PRINTS PR00359 B-class P450 signature 164 179 6.3E-44 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3692 a6eee8b668a3454a521d57317492eef2 415 PRINTS PR00359 B-class P450 signature 147 163 6.3E-44 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3692 a6eee8b668a3454a521d57317492eef2 415 PRINTS PR00359 B-class P450 signature 300 327 6.3E-44 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_3692 a6eee8b668a3454a521d57317492eef2 415 Pfam PF00067 Cytochrome P450 286 374 5.2E-11 T 12-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_2112 58d1a17544e5d40a1c18d529b0a2ce8e 308 SUPERFAMILY SSF47807 185 299 4.93E-18 T 12-10-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily JDM601_2112 58d1a17544e5d40a1c18d529b0a2ce8e 308 SUPERFAMILY SSF88723 2 175 1.5E-32 T 12-10-2018 IPR029060 PIN-like domain superfamily JDM601_2112 58d1a17544e5d40a1c18d529b0a2ce8e 308 SMART SM00475 1 274 8.4E-78 T 12-10-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 JDM601_2112 58d1a17544e5d40a1c18d529b0a2ce8e 308 SMART SM00279 182 217 4.2E-10 T 12-10-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 JDM601_2112 58d1a17544e5d40a1c18d529b0a2ce8e 308 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 184 267 2.7E-17 T 12-10-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 JDM601_2112 58d1a17544e5d40a1c18d529b0a2ce8e 308 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 1 175 3.9E-41 T 12-10-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 JDM601_2112 58d1a17544e5d40a1c18d529b0a2ce8e 308 Gene3D G3DSA:3.40.50.1010 1 176 9.5E-40 T 12-10-2018 JDM601_2112 58d1a17544e5d40a1c18d529b0a2ce8e 308 Gene3D G3DSA:1.10.150.20 184 256 1.6E-15 T 12-10-2018 JDM601_2835 8e9ed083d9545751c3a01f5a68629e29 229 Gene3D G3DSA:1.10.357.10 11 198 3.1E-7 T 12-10-2018 JDM601_2835 8e9ed083d9545751c3a01f5a68629e29 229 SUPERFAMILY SSF46689 12 50 5.64E-5 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JDM601_0215 5006bf8dc3c23efc97a66665198bbb2f 313 Gene3D G3DSA:1.10.620.20 1 290 7.7E-119 T 12-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 JDM601_0215 5006bf8dc3c23efc97a66665198bbb2f 313 SUPERFAMILY SSF47240 17 274 2.07E-48 T 12-10-2018 IPR009078 Ferritin-like superfamily JDM601_0215 5006bf8dc3c23efc97a66665198bbb2f 313 Pfam PF00268 Ribonucleotide reductase, small chain 28 265 2.0E-15 T 12-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 JDM601_2913 4d384ef4326a71291fa3bbfde04f28e0 77 Gene3D G3DSA:3.40.30.10 1 76 2.0E-23 T 12-10-2018 JDM601_2913 4d384ef4326a71291fa3bbfde04f28e0 77 SUPERFAMILY SSF52833 1 74 2.97E-14 T 12-10-2018 IPR036249 Thioredoxin-like superfamily JDM601_2913 4d384ef4326a71291fa3bbfde04f28e0 77 Pfam PF00462 Glutaredoxin 1 54 1.8E-12 T 12-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 JDM601_2913 4d384ef4326a71291fa3bbfde04f28e0 77 TIGRFAM TIGR02200 GlrX_actino: glutaredoxin-like protein 1 73 6.5E-32 T 12-10-2018 IPR011915 Glutaredoxin-like protein, actinobacteria JDM601_4028 82df9bbdd521ed2c9dd4d3ae71f51d08 609 SUPERFAMILY SSF56801 3 556 3.27E-100 T 12-10-2018 JDM601_4028 82df9bbdd521ed2c9dd4d3ae71f51d08 609 Pfam PF00501 AMP-binding enzyme 10 448 6.8E-79 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 JDM601_4028 82df9bbdd521ed2c9dd4d3ae71f51d08 609 Gene3D G3DSA:3.30.300.30 443 574 1.2E-33 T 12-10-2018 JDM601_4028 82df9bbdd521ed2c9dd4d3ae71f51d08 609 Gene3D G3DSA:3.40.50.12780 3 441 5.3E-142 T 12-10-2018 JDM601_1796 93c53fc6d8bbccd60a79b7d483e54fd3 248 Pfam PF00227 Proteasome subunit 25 195 2.5E-39 T 12-10-2018 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: R-HSA-1169091|Reactome: R-HSA-1234176|Reactome: R-HSA-1236974|Reactome: R-HSA-1236978|Reactome: R-HSA-174084|Reactome: R-HSA-174113|Reactome: R-HSA-174154|Reactome: R-HSA-174178|Reactome: R-HSA-174184|Reactome: R-HSA-180534|Reactome: R-HSA-180585|Reactome: R-HSA-187577|Reactome: R-HSA-195253|Reactome: R-HSA-202424|Reactome: R-HSA-211733|Reactome: R-HSA-2467813|Reactome: R-HSA-2871837|Reactome: R-HSA-349425|Reactome: R-HSA-350562|Reactome: R-HSA-382556|Reactome: R-HSA-450408|Reactome: R-HSA-4608870|Reactome: R-HSA-4641257|Reactome: R-HSA-4641258|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5607761|Reactome: R-HSA-5607764|Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5632684|Reactome: R-HSA-5658442|Reactome: R-HSA-5668541|Reactome: R-HSA-5676590|Reactome: R-HSA-5678895|Reactome: R-HSA-5687128|Reactome: R-HSA-5689603|Reactome: R-HSA-5689880|Reactome: R-HSA-68827|Reactome: R-HSA-68949|Reactome: R-HSA-69017|Reactome: R-HSA-69229|Reactome: R-HSA-69481|Reactome: R-HSA-69601|Reactome: R-HSA-8852276|Reactome: R-HSA-8854050|Reactome: R-HSA-8939236|Reactome: R-HSA-8939902|Reactome: R-HSA-8941858|Reactome: R-HSA-8948751|Reactome: R-HSA-8951664|Reactome: R-HSA-9010553|Reactome: R-HSA-9020702|Reactome: R-HSA-9604323|Reactome: R-HSA-983168 JDM601_1796 93c53fc6d8bbccd60a79b7d483e54fd3 248 Gene3D G3DSA:3.60.20.10 1 247 9.8E-73 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal JDM601_1796 93c53fc6d8bbccd60a79b7d483e54fd3 248 TIGRFAM TIGR03691 20S_bact_alpha: proteasome, alpha subunit 1 233 3.9E-111 T 12-10-2018 IPR022296 Proteasome, alpha subunit, bacterial GO:0004298|GO:0019773|GO:0051603 JDM601_1796 93c53fc6d8bbccd60a79b7d483e54fd3 248 Hamap MF_00289_B Proteasome subunit alpha [prcA]. 1 237 46.959 T 12-10-2018 IPR022296 Proteasome, alpha subunit, bacterial GO:0004298|GO:0019773|GO:0051603 JDM601_1796 93c53fc6d8bbccd60a79b7d483e54fd3 248 SUPERFAMILY SSF56235 10 234 6.27E-47 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal JDM601_2550 abd7d78d9520b849e8b545fd3c0b0c16 217 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 106 184 7.9E-12 T 12-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 JDM601_2550 abd7d78d9520b849e8b545fd3c0b0c16 217 PRINTS PR01399 Enterobactin synthetase component D signature 146 162 3.9E-27 T 12-10-2018 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 JDM601_2550 abd7d78d9520b849e8b545fd3c0b0c16 217 PRINTS PR01399 Enterobactin synthetase component D signature 72 90 3.9E-27 T 12-10-2018 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 JDM601_2550 abd7d78d9520b849e8b545fd3c0b0c16 217 PRINTS PR01399 Enterobactin synthetase component D signature 42 62 3.9E-27 T 12-10-2018 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 JDM601_2550 abd7d78d9520b849e8b545fd3c0b0c16 217 SUPERFAMILY SSF56214 104 216 2.27E-16 T 12-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 JDM601_0782 f12008a6abfa1bd580cd7029b5fef7a3 397 Gene3D G3DSA:3.40.640.10 39 280 8.3E-149 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 JDM601_0782 f12008a6abfa1bd580cd7029b5fef7a3 397 Pfam PF00155 Aminotransferase class I and II 27 386 1.6E-57 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 JDM601_0782 f12008a6abfa1bd580cd7029b5fef7a3 397 Gene3D G3DSA:3.90.1150.10 15 386 8.3E-149 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 JDM601_0782 f12008a6abfa1bd580cd7029b5fef7a3 397 SUPERFAMILY SSF53383 4 387 1.88E-101 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase JDM601_2395 647ad31b8f3728a451a5336813de3b1e 220 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 71 93 - T 12-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 JDM601_2395 647ad31b8f3728a451a5336813de3b1e 220 Gene3D G3DSA:1.20.120.1760 9 205 1.5E-57 T 12-10-2018 JDM601_2395 647ad31b8f3728a451a5336813de3b1e 220 Pfam PF01066 CDP-alcohol phosphatidyltransferase 29 93 1.1E-7 T 12-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 JDM601_3544 4ea0c89125859701f51457c677b31433 151 Pfam PF14340 Domain of unknown function (DUF4395) 11 145 4.0E-40 T 12-10-2018 IPR025508 Domain of unknown function DUF4395 JDM601_2408 186ff58f4af0208a291813bccdc59781 553 SUPERFAMILY SSF56801 4 550 1.19E-92 T 12-10-2018 JDM601_2408 186ff58f4af0208a291813bccdc59781 553 Pfam PF13193 AMP-binding enzyme C-terminal domain 463 538 4.6E-15 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain JDM601_2408 186ff58f4af0208a291813bccdc59781 553 Gene3D G3DSA:3.30.300.30 450 551 2.4E-22 T 12-10-2018 JDM601_2408 186ff58f4af0208a291813bccdc59781 553 Gene3D G3DSA:3.40.50.12780 1 447 1.0E-61 T 12-10-2018 JDM601_2408 186ff58f4af0208a291813bccdc59781 553 Pfam PF00501 AMP-binding enzyme 11 453 1.6E-47 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 JDM601_2408 186ff58f4af0208a291813bccdc59781 553 ProSitePatterns PS00455 Putative AMP-binding domain signature. 184 195 - T 12-10-2018 IPR020845 AMP-binding, conserved site JDM601_3494 32e5738a647eac1c0875bb1bac6d0faa 276 Pfam PF12697 Alpha/beta hydrolase family 15 244 1.3E-10 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 JDM601_3494 32e5738a647eac1c0875bb1bac6d0faa 276 Gene3D G3DSA:3.40.50.1820 3 271 1.1E-18 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_3494 32e5738a647eac1c0875bb1bac6d0faa 276 SUPERFAMILY SSF53474 10 266 2.7E-21 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_2436 c7ea104f3346752cc7b6110ac4a33c4c 123 Gene3D G3DSA:2.40.50.140 37 123 1.9E-5 T 12-10-2018 JDM601_2436 c7ea104f3346752cc7b6110ac4a33c4c 123 PIRSF PIRSF006910 1 123 5.6E-62 T 12-10-2018 IPR016499 Nucleic acid binding protein, Rv2694c, predicted JDM601_0746 e93946a54e5ca2a11c4a76e29049be84 314 SUPERFAMILY SSF52096 125 311 3.32E-46 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily JDM601_0746 e93946a54e5ca2a11c4a76e29049be84 314 Gene3D G3DSA:3.90.226.10 122 314 2.6E-49 T 12-10-2018 JDM601_0746 e93946a54e5ca2a11c4a76e29049be84 314 Pfam PF00378 Enoyl-CoA hydratase/isomerase 142 311 2.2E-28 T 12-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 JDM601_2562 aedbbfd9cbda0a2b656c62ab3f6189c9 159 Pfam PF02033 Ribosome-binding factor A 6 113 6.5E-22 T 12-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 JDM601_2562 aedbbfd9cbda0a2b656c62ab3f6189c9 159 Gene3D G3DSA:3.30.300.20 3 121 3.0E-21 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta JDM601_2562 aedbbfd9cbda0a2b656c62ab3f6189c9 159 SUPERFAMILY SSF89919 1 115 5.23E-25 T 12-10-2018 IPR023799 Ribosome-binding factor A domain superfamily JDM601_2562 aedbbfd9cbda0a2b656c62ab3f6189c9 159 ProSitePatterns PS01319 Ribosome-binding factor A signature. 79 100 - T 12-10-2018 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 JDM601_2562 aedbbfd9cbda0a2b656c62ab3f6189c9 159 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 5 113 22.385 T 12-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 JDM601_2562 aedbbfd9cbda0a2b656c62ab3f6189c9 159 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 1 114 3.4E-17 T 12-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 JDM601_2562 aedbbfd9cbda0a2b656c62ab3f6189c9 159 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 9 100 1.0E-28 T 12-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 JDM601_4054 da181ea000397295e3fa9f24a757b50c 327 TIGRFAM TIGR03718 R_switched_Alx: integral membrane protein, TerC family 5 309 3.7E-105 T 12-10-2018 IPR022369 Integral membrane protein TerC, riboswitch-linked GO:0016021 JDM601_4054 da181ea000397295e3fa9f24a757b50c 327 Pfam PF03741 Integral membrane protein TerC family 69 273 1.9E-50 T 12-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 JDM601_1919 eba0e68dd837df8b3024f8e5fcf751b5 110 PIRSF PIRSF018579 1 110 1.0E-47 T 12-10-2018 IPR009709 Protein of unknown function DUF1290 JDM601_1919 eba0e68dd837df8b3024f8e5fcf751b5 110 Pfam PF06947 Protein of unknown function (DUF1290) 21 108 1.2E-33 T 12-10-2018 IPR009709 Protein of unknown function DUF1290 JDM601_3099 2b214ff56931539419fa8ef76f8d1c6a 392 SUPERFAMILY SSF51735 157 350 2.51E-42 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_3099 2b214ff56931539419fa8ef76f8d1c6a 392 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 59 73 - T 12-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 JDM601_3099 2b214ff56931539419fa8ef76f8d1c6a 392 Gene3D G3DSA:3.40.50.720 169 350 1.3E-117 T 12-10-2018 JDM601_3099 2b214ff56931539419fa8ef76f8d1c6a 392 Gene3D G3DSA:3.90.180.10 4 379 1.3E-117 T 12-10-2018 JDM601_3099 2b214ff56931539419fa8ef76f8d1c6a 392 Pfam PF00107 Zinc-binding dehydrogenase 189 257 6.1E-11 T 12-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 JDM601_3099 2b214ff56931539419fa8ef76f8d1c6a 392 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 27 143 2.6E-26 T 12-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 JDM601_3099 2b214ff56931539419fa8ef76f8d1c6a 392 SUPERFAMILY SSF50129 1 176 1.56E-55 T 12-10-2018 IPR011032 GroES-like superfamily JDM601_3099 2b214ff56931539419fa8ef76f8d1c6a 392 Pfam PF13823 Alcohol dehydrogenase GroES-associated 1 23 3.2E-12 T 12-10-2018 IPR027399 Alcohol dehydrogenase GroES-associated JDM601_2782 09ca36b30fd52467f94e9cb612c56347 245 Pfam PF00440 Bacterial regulatory proteins, tetR family 35 80 5.2E-13 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_2782 09ca36b30fd52467f94e9cb612c56347 245 SUPERFAMILY SSF48498 102 206 3.34E-9 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily JDM601_2782 09ca36b30fd52467f94e9cb612c56347 245 SUPERFAMILY SSF46689 23 97 4.99E-16 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JDM601_2782 09ca36b30fd52467f94e9cb612c56347 245 Gene3D G3DSA:1.10.357.10 19 241 9.1E-29 T 12-10-2018 JDM601_2782 09ca36b30fd52467f94e9cb612c56347 245 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 35 48 5.0E-6 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_2782 09ca36b30fd52467f94e9cb612c56347 245 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 55 78 5.0E-6 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_2603 be4731c4e4943acd8ada396ac6788368 648 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 149 173 5.2E-9 T 12-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 JDM601_2603 be4731c4e4943acd8ada396ac6788368 648 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 215 239 5.2E-9 T 12-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 JDM601_2603 be4731c4e4943acd8ada396ac6788368 648 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 366 392 5.2E-9 T 12-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 JDM601_2603 be4731c4e4943acd8ada396ac6788368 648 Pfam PF00361 Proton-conducting membrane transporter 112 396 2.6E-52 T 12-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 JDM601_0869 c8c9295773005b676f44a3e720480f65 122 TIGRFAM TIGR00494 crcB: protein CrcB 4 115 2.0E-25 T 12-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 JDM601_0869 c8c9295773005b676f44a3e720480f65 122 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 3 118 18.295 T 12-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 JDM601_0869 c8c9295773005b676f44a3e720480f65 122 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 4 111 1.9E-23 T 12-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 JDM601_3532 023cd0a958fb24566e59f4df55630a59 301 SUPERFAMILY SSF161098 37 283 1.31E-38 T 12-10-2018 IPR035906 MetI-like superfamily JDM601_3532 023cd0a958fb24566e59f4df55630a59 301 Gene3D G3DSA:1.10.3720.10 76 299 1.2E-32 T 12-10-2018 IPR035906 MetI-like superfamily JDM601_3532 023cd0a958fb24566e59f4df55630a59 301 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 27 294 5.2E-76 T 12-10-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 JDM601_3532 023cd0a958fb24566e59f4df55630a59 301 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 99 294 1.9E-22 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 JDM601_2908 b042e360cb7b98d08d029782ddcf3f69 286 Pfam PF01553 Acyltransferase 42 168 1.1E-6 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 JDM601_2908 b042e360cb7b98d08d029782ddcf3f69 286 SMART SM00563 54 171 2.2E-4 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 JDM601_2908 b042e360cb7b98d08d029782ddcf3f69 286 PIRSF PIRSF016753 1 271 1.0E-63 T 12-10-2018 IPR016676 Phospholipid/glycerol acyltransferase, predicted JDM601_2908 b042e360cb7b98d08d029782ddcf3f69 286 SUPERFAMILY SSF69593 37 259 8.24E-14 T 12-10-2018 JDM601_1179 df6c5d2ad97bb7728b70ab58ca0e36a5 686 SUPERFAMILY SSF52540 9 122 1.02E-6 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_1179 df6c5d2ad97bb7728b70ab58ca0e36a5 686 Gene3D G3DSA:1.25.40.10 404 685 1.0E-8 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JDM601_1179 df6c5d2ad97bb7728b70ab58ca0e36a5 686 Gene3D G3DSA:3.40.50.300 6 148 4.2E-8 T 12-10-2018 JDM601_2418 a2277d202491d130a2ab891872a45c08 518 SUPERFAMILY SSF53474 115 489 8.02E-20 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_2418 a2277d202491d130a2ab891872a45c08 518 Pfam PF08386 TAP-like protein 415 516 1.1E-17 T 12-10-2018 IPR013595 Peptidase S33 tripeptidyl aminopeptidase-like, C-terminal JDM601_0189 e1386381f45fa3b75d33741d74b0ac5f 273 SUPERFAMILY SSF69593 32 263 9.55E-9 T 12-10-2018 JDM601_0189 e1386381f45fa3b75d33741d74b0ac5f 273 Pfam PF01553 Acyltransferase 42 168 1.1E-13 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 JDM601_0189 e1386381f45fa3b75d33741d74b0ac5f 273 PIRSF PIRSF016753 7 273 8.8E-72 T 12-10-2018 IPR016676 Phospholipid/glycerol acyltransferase, predicted JDM601_0189 e1386381f45fa3b75d33741d74b0ac5f 273 SMART SM00563 54 173 6.9E-7 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 JDM601_1562 85543ae73df4241b84323c076bb9d5ae 482 ProSitePatterns PS00571 Amidases signature. 157 188 - T 12-10-2018 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921|Reactome: R-HSA-2142753 JDM601_1562 85543ae73df4241b84323c076bb9d5ae 482 SUPERFAMILY SSF75304 12 462 4.84E-113 T 12-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 JDM601_1562 85543ae73df4241b84323c076bb9d5ae 482 Pfam PF01425 Amidase 31 452 1.3E-114 T 12-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 JDM601_1562 85543ae73df4241b84323c076bb9d5ae 482 Gene3D G3DSA:3.90.1300.10 11 477 3.3E-123 T 12-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 JDM601_2991 a58c23fef3558a45edbcc5d8dddf6732 411 Pfam PF00487 Fatty acid desaturase 127 346 1.2E-34 T 12-10-2018 IPR005804 Fatty acid desaturase domain GO:0006629 JDM601_1261 29bf785e584a26e81e8eafc14751d58c 74 Gene3D G3DSA:3.40.50.1010 5 74 1.0E-8 T 12-10-2018 JDM601_1261 29bf785e584a26e81e8eafc14751d58c 74 SUPERFAMILY SSF88723 8 63 3.08E-5 T 12-10-2018 IPR029060 PIN-like domain superfamily JDM601_2612 e5d55ae93dc1caa79e9d983a61f0c7d9 164 SUPERFAMILY SSF51261 17 151 6.28E-16 T 12-10-2018 IPR011055 Duplicated hybrid motif JDM601_2612 e5d55ae93dc1caa79e9d983a61f0c7d9 164 Gene3D G3DSA:2.70.70.10 11 151 1.3E-17 T 12-10-2018 IPR011055 Duplicated hybrid motif JDM601_2612 e5d55ae93dc1caa79e9d983a61f0c7d9 164 Pfam PF01551 Peptidase family M23 49 135 1.2E-13 T 12-10-2018 IPR016047 Peptidase M23 JDM601_2257 6538c5d96dbdb608286194dc169acc43 308 SMART SM00382 31 209 2.4E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain JDM601_2257 6538c5d96dbdb608286194dc169acc43 308 Pfam PF00005 ABC transporter 24 161 6.2E-24 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JDM601_2257 6538c5d96dbdb608286194dc169acc43 308 SUPERFAMILY SSF52540 3 222 1.9E-55 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_2257 6538c5d96dbdb608286194dc169acc43 308 Gene3D G3DSA:3.40.50.300 1 230 5.8E-58 T 12-10-2018 JDM601_2257 6538c5d96dbdb608286194dc169acc43 308 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JDM601_2891 a0d91dd9f56a243d1093a1cdf5636bc5 298 Pfam PF02405 Permease MlaE 77 288 3.7E-59 T 12-10-2018 IPR030802 ABC transporter permease MalE GO:0043190 JDM601_0082 d4f8ac5b562865fb5f160c784d247cba 395 SUPERFAMILY SSF48264 11 391 5.11E-78 T 12-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_0082 d4f8ac5b562865fb5f160c784d247cba 395 PRINTS PR00385 P450 superfamily signature 345 356 1.1E-5 T 12-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_0082 d4f8ac5b562865fb5f160c784d247cba 395 PRINTS PR00385 P450 superfamily signature 232 249 1.1E-5 T 12-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_0082 d4f8ac5b562865fb5f160c784d247cba 395 PRINTS PR00385 P450 superfamily signature 336 345 1.1E-5 T 12-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_0082 d4f8ac5b562865fb5f160c784d247cba 395 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 338 347 - T 12-10-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 JDM601_0082 d4f8ac5b562865fb5f160c784d247cba 395 PRINTS PR00359 B-class P450 signature 345 356 2.1E-34 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_0082 d4f8ac5b562865fb5f160c784d247cba 395 PRINTS PR00359 B-class P450 signature 336 345 2.1E-34 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_0082 d4f8ac5b562865fb5f160c784d247cba 395 PRINTS PR00359 B-class P450 signature 146 161 2.1E-34 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_0082 d4f8ac5b562865fb5f160c784d247cba 395 PRINTS PR00359 B-class P450 signature 315 330 2.1E-34 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_0082 d4f8ac5b562865fb5f160c784d247cba 395 PRINTS PR00359 B-class P450 signature 129 145 2.1E-34 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_0082 d4f8ac5b562865fb5f160c784d247cba 395 PRINTS PR00359 B-class P450 signature 266 277 2.1E-34 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_0082 d4f8ac5b562865fb5f160c784d247cba 395 PRINTS PR00359 B-class P450 signature 189 211 2.1E-34 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_0082 d4f8ac5b562865fb5f160c784d247cba 395 Gene3D G3DSA:1.10.630.10 2 394 1.6E-104 T 12-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_0082 d4f8ac5b562865fb5f160c784d247cba 395 Pfam PF00067 Cytochrome P450 267 370 4.2E-15 T 12-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_3437 917f6afa2d83287fee4792fdba232b38 390 Gene3D G3DSA:3.20.20.140 35 389 4.8E-64 T 12-10-2018 JDM601_3437 917f6afa2d83287fee4792fdba232b38 390 Pfam PF04909 Amidohydrolase 111 389 6.3E-20 T 12-10-2018 IPR006680 Amidohydrolase-related GO:0016787 JDM601_3437 917f6afa2d83287fee4792fdba232b38 390 SUPERFAMILY SSF51556 40 389 2.17E-55 T 12-10-2018 IPR032466 Metal-dependent hydrolase JDM601_1060 740ea3b51dba7b5fcae4dcd5c5ac97da 309 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 1 278 5.6E-98 T 12-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 JDM601_1060 740ea3b51dba7b5fcae4dcd5c5ac97da 309 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 1 282 35.759 T 12-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 JDM601_1060 740ea3b51dba7b5fcae4dcd5c5ac97da 309 Gene3D G3DSA:3.40.1010.20 4 277 7.4E-110 T 12-10-2018 JDM601_1060 740ea3b51dba7b5fcae4dcd5c5ac97da 309 Gene3D G3DSA:3.40.50.11270 10 94 7.4E-110 T 12-10-2018 JDM601_1060 740ea3b51dba7b5fcae4dcd5c5ac97da 309 Gene3D G3DSA:3.40.1010.20 95 191 7.4E-110 T 12-10-2018 JDM601_1060 740ea3b51dba7b5fcae4dcd5c5ac97da 309 Pfam PF02401 LytB protein 1 278 7.1E-91 T 12-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 JDM601_0730 8c580cfde25a0981b5fe99c941c1153f 390 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 13 123 6.2E-17 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 JDM601_0730 8c580cfde25a0981b5fe99c941c1153f 390 Gene3D G3DSA:1.10.540.10 5 122 1.0E-22 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 JDM601_0730 8c580cfde25a0981b5fe99c941c1153f 390 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 127 226 5.2E-22 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 JDM601_0730 8c580cfde25a0981b5fe99c941c1153f 390 Gene3D G3DSA:1.20.140.10 244 390 9.0E-14 T 12-10-2018 JDM601_0730 8c580cfde25a0981b5fe99c941c1153f 390 Gene3D G3DSA:2.40.110.10 127 243 4.8E-34 T 12-10-2018 JDM601_0730 8c580cfde25a0981b5fe99c941c1153f 390 SUPERFAMILY SSF47203 241 388 1.55E-8 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 JDM601_0730 8c580cfde25a0981b5fe99c941c1153f 390 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 240 385 1.2E-7 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 JDM601_0730 8c580cfde25a0981b5fe99c941c1153f 390 SUPERFAMILY SSF56645 3 250 2.36E-63 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 JDM601_0648 660f3c3d835d5ba45a8fe5c63e04ac85 205 Pfam PF08808 RES domain 31 181 2.2E-10 T 12-10-2018 IPR014914 RES domain JDM601_1113 2f1139f5d4a635165a7cc2bf20efa065 510 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 261 268 - T 12-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 JDM601_1113 2f1139f5d4a635165a7cc2bf20efa065 510 Gene3D G3DSA:3.40.605.10 13 485 1.4E-144 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 JDM601_1113 2f1139f5d4a635165a7cc2bf20efa065 510 Gene3D G3DSA:3.40.309.10 266 457 1.4E-144 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 JDM601_1113 2f1139f5d4a635165a7cc2bf20efa065 510 Pfam PF00171 Aldehyde dehydrogenase family 18 487 1.5E-138 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 JDM601_1113 2f1139f5d4a635165a7cc2bf20efa065 510 SUPERFAMILY SSF53720 7 488 5.89E-133 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 JDM601_3000 ff2b77fc80f3e76d0407a1fdd505c2a7 203 SUPERFAMILY SSF53335 17 156 1.73E-11 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JDM601_3000 ff2b77fc80f3e76d0407a1fdd505c2a7 203 Gene3D G3DSA:3.40.50.150 1 199 3.2E-7 T 12-10-2018 JDM601_1811 01748bdbf0be53855cadedc933f09a5c 522 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 78 231 1.5E-8 T 12-10-2018 IPR038731 Glycosyltransferase RgtA/B/C/D-like JDM601_0527 1767900f375cac92889bc153b9a6904b 325 Pfam PF01578 Cytochrome C assembly protein 108 319 4.6E-44 T 12-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 JDM601_0527 1767900f375cac92889bc153b9a6904b 325 TIGRFAM TIGR03144 cytochr_II_ccsB: cytochrome c-type biogenesis protein CcsB 85 322 1.9E-74 T 12-10-2018 IPR017562 Cytochrome c-type biogenesis protein CcsA GO:0017004 JDM601_2613 ae764a8b9a3d007e1e8d6df38d48150e 289 PRINTS PR00111 Alpha/beta hydrolase fold signature 54 69 1.4E-8 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 JDM601_2613 ae764a8b9a3d007e1e8d6df38d48150e 289 PRINTS PR00111 Alpha/beta hydrolase fold signature 98 111 1.4E-8 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 JDM601_2613 ae764a8b9a3d007e1e8d6df38d48150e 289 PRINTS PR00111 Alpha/beta hydrolase fold signature 112 125 1.4E-8 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 JDM601_2613 ae764a8b9a3d007e1e8d6df38d48150e 289 Pfam PF00561 alpha/beta hydrolase fold 27 274 6.0E-23 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 JDM601_2613 ae764a8b9a3d007e1e8d6df38d48150e 289 SUPERFAMILY SSF53474 6 288 4.81E-54 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_2613 ae764a8b9a3d007e1e8d6df38d48150e 289 PRINTS PR00412 Epoxide hydrolase signature 112 125 6.7E-9 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 JDM601_2613 ae764a8b9a3d007e1e8d6df38d48150e 289 PRINTS PR00412 Epoxide hydrolase signature 263 285 6.7E-9 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 JDM601_2613 ae764a8b9a3d007e1e8d6df38d48150e 289 PRINTS PR00412 Epoxide hydrolase signature 54 69 6.7E-9 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 JDM601_2613 ae764a8b9a3d007e1e8d6df38d48150e 289 Gene3D G3DSA:3.40.50.1820 5 289 2.7E-57 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_3704 dcaa855497fe8e3c032fa5b3caa3cdf2 251 Pfam PF00378 Enoyl-CoA hydratase/isomerase 10 209 2.0E-38 T 12-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 JDM601_3704 dcaa855497fe8e3c032fa5b3caa3cdf2 251 SUPERFAMILY SSF52096 5 244 1.05E-56 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily JDM601_3704 dcaa855497fe8e3c032fa5b3caa3cdf2 251 Gene3D G3DSA:3.90.226.10 4 250 6.2E-57 T 12-10-2018 JDM601_1194 0f2bdaaff93e27432c59c7e42b0d5868 223 Pfam PF01596 O-methyltransferase 49 220 1.4E-26 T 12-10-2018 IPR002935 O-methyltransferase, family 3 GO:0008171 JDM601_1194 0f2bdaaff93e27432c59c7e42b0d5868 223 Gene3D G3DSA:3.40.50.150 16 223 1.2E-58 T 12-10-2018 JDM601_1194 0f2bdaaff93e27432c59c7e42b0d5868 223 SUPERFAMILY SSF53335 49 222 3.16E-31 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JDM601_1012 af1bb27ba665a3bb9683c61666f2f426 315 Gene3D G3DSA:3.40.1090.10 1 104 4.3E-15 T 12-10-2018 JDM601_1012 af1bb27ba665a3bb9683c61666f2f426 315 SUPERFAMILY SSF52151 1 175 3.92E-42 T 12-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase JDM601_1012 af1bb27ba665a3bb9683c61666f2f426 315 Pfam PF01734 Patatin-like phospholipase 3 159 4.1E-15 T 12-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 JDM601_4134 f641d37485bbaeb02ee32b84a7b7719a 517 Pfam PF13483 Beta-lactamase superfamily domain 2 79 3.4E-6 T 12-10-2018 JDM601_4134 f641d37485bbaeb02ee32b84a7b7719a 517 Gene3D G3DSA:3.60.15.10 1 243 1.1E-27 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like JDM601_4134 f641d37485bbaeb02ee32b84a7b7719a 517 Gene3D G3DSA:2.102.10.10 460 517 1.7E-11 T 12-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 JDM601_4134 f641d37485bbaeb02ee32b84a7b7719a 517 SUPERFAMILY SSF50022 466 513 4.45E-12 T 12-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 JDM601_4134 f641d37485bbaeb02ee32b84a7b7719a 517 Pfam PF00355 Rieske [2Fe-2S] domain 467 508 1.1E-7 T 12-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 JDM601_4134 f641d37485bbaeb02ee32b84a7b7719a 517 SUPERFAMILY SSF56281 2 235 3.64E-12 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like JDM601_2033 1b3e421921e9378ecb001df269a26896 333 TIGRFAM TIGR03617 F420_MSMEG_2256: probable F420-dependent oxidoreductase, MSMEG_2256 family 14 313 1.5E-92 T 12-10-2018 IPR019919 Luciferase-like, F420-dependent oxidoreductase, MSMEG2256, predicted JDM601_2033 1b3e421921e9378ecb001df269a26896 333 Pfam PF00296 Luciferase-like monooxygenase 6 306 1.3E-54 T 12-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 JDM601_2033 1b3e421921e9378ecb001df269a26896 333 SUPERFAMILY SSF51679 7 324 3.4E-44 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 JDM601_2033 1b3e421921e9378ecb001df269a26896 333 Gene3D G3DSA:3.20.20.30 2 331 1.8E-53 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 JDM601_1140 2d8615e6d6fc388dab203db1f37040e1 143 Gene3D G3DSA:2.30.110.10 1 143 3.0E-46 T 12-10-2018 IPR012349 FMN-binding split barrel GO:0048037 JDM601_1140 2d8615e6d6fc388dab203db1f37040e1 143 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 2 86 3.3E-14 T 12-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 JDM601_1140 2d8615e6d6fc388dab203db1f37040e1 143 SUPERFAMILY SSF50475 2 138 1.09E-34 T 12-10-2018 JDM601_1140 2d8615e6d6fc388dab203db1f37040e1 143 TIGRFAM TIGR03618 Rv1155_F420: PPOX class probable F420-dependent enzyme 7 137 1.9E-40 T 12-10-2018 IPR019920 F420-binding domain, putative JDM601_2317 c6fefd6a4676762c690defc07d542f58 400 Pfam PF00144 Beta-lactamase 19 367 7.5E-69 T 12-10-2018 IPR001466 Beta-lactamase-related JDM601_2317 c6fefd6a4676762c690defc07d542f58 400 SUPERFAMILY SSF56601 8 366 1.34E-82 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like JDM601_2317 c6fefd6a4676762c690defc07d542f58 400 Gene3D G3DSA:3.40.710.10 6 376 3.8E-107 T 12-10-2018 JDM601_2353 0ea0bcd35665f3fa2146215a30b54638 114 Gene3D G3DSA:1.10.530.10 19 99 2.9E-33 T 12-10-2018 JDM601_2353 0ea0bcd35665f3fa2146215a30b54638 114 Pfam PF06737 Transglycosylase-like domain 20 88 1.5E-32 T 12-10-2018 IPR010618 Transglycosylase-like JDM601_2353 0ea0bcd35665f3fa2146215a30b54638 114 SUPERFAMILY SSF53955 20 90 1.24E-29 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily JDM601_1051 990c47278adbf5574e0888c4ea215738 328 Gene3D G3DSA:3.30.540.10 1 304 2.3E-131 T 12-10-2018 JDM601_1051 990c47278adbf5574e0888c4ea215738 328 Pfam PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded 1 304 4.9E-138 T 12-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 JDM601_1051 990c47278adbf5574e0888c4ea215738 328 TIGRFAM TIGR00330 glpX: fructose-1,6-bisphosphatase, class II 1 309 3.8E-107 T 12-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 JDM601_1051 990c47278adbf5574e0888c4ea215738 328 PIRSF PIRSF004532 1 315 4.2E-149 T 12-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 JDM601_1051 990c47278adbf5574e0888c4ea215738 328 SUPERFAMILY SSF56655 2 307 1.03E-108 T 12-10-2018 JDM601_1051 990c47278adbf5574e0888c4ea215738 328 Gene3D G3DSA:3.40.190.90 117 278 2.3E-131 T 12-10-2018 JDM601_3611 f5fc0e6b2e7f3cf118771da12d0e2b2e 176 SMART SM00867 16 174 1.9E-27 T 12-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like JDM601_3611 f5fc0e6b2e7f3cf118771da12d0e2b2e 176 Pfam PF04264 YceI-like domain 17 173 2.7E-26 T 12-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like JDM601_3611 f5fc0e6b2e7f3cf118771da12d0e2b2e 176 Gene3D G3DSA:2.40.128.110 16 175 1.2E-31 T 12-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily JDM601_3611 f5fc0e6b2e7f3cf118771da12d0e2b2e 176 SUPERFAMILY SSF101874 15 175 1.24E-31 T 12-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily JDM601_1660 9e7592025605947d3b4d7c4ceb8fccd2 269 Pfam PF09995 Uncharacterized protein conserved in bacteria (DUF2236) 15 236 1.6E-47 T 12-10-2018 IPR018713 Domain of unknown function DUF2236 JDM601_4106 61a3e1747ac467a910c020c9a9d4cdf1 99 Pfam PF03626 Prokaryotic Cytochrome C oxidase subunit IV 19 93 4.6E-12 T 12-10-2018 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes GO:0016021 JDM601_1164 d4b36baaf4f5b065c25a1006a9e0adbb 369 Pfam PF00155 Aminotransferase class I and II 31 365 7.0E-46 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 JDM601_1164 d4b36baaf4f5b065c25a1006a9e0adbb 369 TIGRFAM TIGR03539 DapC_actino: succinyldiaminopimelate transaminase 9 365 1.0E-176 T 12-10-2018 IPR019880 4-dedimethylamino-4-oxo-anhydrotetracycline transaminase OxyQ JDM601_1164 d4b36baaf4f5b065c25a1006a9e0adbb 369 Gene3D G3DSA:3.90.1150.10 17 358 7.5E-84 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 JDM601_1164 d4b36baaf4f5b065c25a1006a9e0adbb 369 SUPERFAMILY SSF53383 7 365 4.89E-78 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase JDM601_1164 d4b36baaf4f5b065c25a1006a9e0adbb 369 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 223 236 - T 12-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 JDM601_1164 d4b36baaf4f5b065c25a1006a9e0adbb 369 Gene3D G3DSA:3.40.640.10 43 272 7.5E-84 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 JDM601_2050 4bbe4a9eccef6785a421874cbedaf1e2 417 Pfam PF13469 Sulfotransferase family 117 364 9.1E-38 T 12-10-2018 JDM601_2050 4bbe4a9eccef6785a421874cbedaf1e2 417 Gene3D G3DSA:3.40.50.300 27 406 5.6E-100 T 12-10-2018 JDM601_2050 4bbe4a9eccef6785a421874cbedaf1e2 417 SUPERFAMILY SSF52540 114 369 2.05E-22 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_2993 31047ef31380fc041d1a602062ec1656 304 Gene3D G3DSA:3.40.50.1820 8 295 9.3E-42 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_2993 31047ef31380fc041d1a602062ec1656 304 Pfam PF00561 alpha/beta hydrolase fold 38 140 6.5E-9 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 JDM601_2993 31047ef31380fc041d1a602062ec1656 304 SUPERFAMILY SSF53474 13 295 2.72E-37 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_2014 4c6e23970643c20f6f2cb61aa1296791 310 Pfam PF10118 Predicted metal-dependent hydrolase 8 218 1.0E-37 T 12-10-2018 IPR016516 Uncharacterised conserved protein UCP07580 JDM601_4317 82151b13b1cfccb81d599f23b3a03020 254 SUPERFAMILY SSF51679 5 229 1.22E-44 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 JDM601_4317 82151b13b1cfccb81d599f23b3a03020 254 Pfam PF00296 Luciferase-like monooxygenase 10 216 1.6E-31 T 12-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 JDM601_4317 82151b13b1cfccb81d599f23b3a03020 254 TIGRFAM TIGR03856 F420_MSMEG_2906: probable F420-dependent oxidoreductase, MSMEG_2906 family 1 252 1.9E-128 T 12-10-2018 IPR022480 F420-dependent oxidoreductase, MSMEG2906 JDM601_4317 82151b13b1cfccb81d599f23b3a03020 254 Gene3D G3DSA:3.20.20.30 1 247 1.5E-48 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 JDM601_3780 a6795b3270ccf4b828611fb222c948df 441 Pfam PF00501 AMP-binding enzyme 4 340 1.0E-62 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 JDM601_3780 a6795b3270ccf4b828611fb222c948df 441 Gene3D G3DSA:3.30.300.310 337 437 9.5E-31 T 12-10-2018 JDM601_3780 a6795b3270ccf4b828611fb222c948df 441 SUPERFAMILY SSF56801 4 436 3.01E-115 T 12-10-2018 JDM601_3780 a6795b3270ccf4b828611fb222c948df 441 Pfam PF13193 AMP-binding enzyme C-terminal domain 349 424 4.3E-19 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain JDM601_3780 a6795b3270ccf4b828611fb222c948df 441 Gene3D G3DSA:3.40.50.12780 2 336 2.5E-78 T 12-10-2018 JDM601_0498 adfbd8678fd0c2ca2906e2bff9f0af8c 350 Gene3D G3DSA:3.40.50.720 1 314 2.2E-37 T 12-10-2018 JDM601_0498 adfbd8678fd0c2ca2906e2bff9f0af8c 350 Pfam PF01370 NAD dependent epimerase/dehydratase family 1 180 8.4E-20 T 12-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 JDM601_0498 adfbd8678fd0c2ca2906e2bff9f0af8c 350 SUPERFAMILY SSF51735 1 312 2.79E-37 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_2443 6ff7ebcaa58d1b48ae4d58d5d4594993 272 SUPERFAMILY SSF53067 28 267 9.39E-34 T 12-10-2018 JDM601_2443 6ff7ebcaa58d1b48ae4d58d5d4594993 272 Gene3D G3DSA:3.30.420.40 21 129 2.6E-22 T 12-10-2018 JDM601_2443 6ff7ebcaa58d1b48ae4d58d5d4594993 272 Pfam PF00480 ROK family 29 184 2.4E-17 T 12-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 JDM601_2443 6ff7ebcaa58d1b48ae4d58d5d4594993 272 Gene3D G3DSA:3.30.420.40 130 270 6.2E-35 T 12-10-2018 JDM601_3189 6492135130fd9164cf9b2326343948d6 440 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 203 217 - T 12-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 JDM601_3189 6492135130fd9164cf9b2326343948d6 440 PIRSF PIRSF001434 1 428 4.7E-122 T 12-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 JDM601_3189 6492135130fd9164cf9b2326343948d6 440 Gene3D G3DSA:3.40.640.10 4 289 2.4E-97 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 JDM601_3189 6492135130fd9164cf9b2326343948d6 440 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 10 424 4.0E-132 T 12-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 JDM601_3189 6492135130fd9164cf9b2326343948d6 440 SUPERFAMILY SSF53383 7 421 5.65E-114 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase JDM601_3189 6492135130fd9164cf9b2326343948d6 440 TIGRFAM TIGR01326 OAH_OAS_sulfhy: O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase 9 424 2.3E-196 T 12-10-2018 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 JDM601_3189 6492135130fd9164cf9b2326343948d6 440 Gene3D G3DSA:3.90.1150.10 293 440 1.1E-49 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 JDM601_1955 0ef3bbf3321e12bef2c5ce66d220fbd8 484 SUPERFAMILY SSF53901 10 246 8.06E-7 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 JDM601_1955 0ef3bbf3321e12bef2c5ce66d220fbd8 484 Gene3D G3DSA:2.40.50.840 413 483 5.9E-6 T 12-10-2018 JDM601_1955 0ef3bbf3321e12bef2c5ce66d220fbd8 484 SUPERFAMILY SSF53901 269 384 1.3E-17 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 JDM601_1157 21e0597c22c08c23fcc0be025736fa2d 615 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 93 471 1.0E-34 T 12-10-2018 IPR000914 Solute-binding protein family 5 domain JDM601_1157 21e0597c22c08c23fcc0be025736fa2d 615 SUPERFAMILY SSF53850 39 597 2.29E-56 T 12-10-2018 JDM601_0749 80730a604a9b84b47d45f65443070aa2 304 SUPERFAMILY SSF53335 15 280 4.02E-78 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JDM601_0749 80730a604a9b84b47d45f65443070aa2 304 TIGRFAM TIGR00027 mthyl_TIGR00027: methyltransferase, TIGR00027 family 17 273 3.9E-82 T 12-10-2018 IPR011610 S-adenosyl-L-methionine-dependent methyltransferase, putative GO:0008168 JDM601_0749 80730a604a9b84b47d45f65443070aa2 304 Pfam PF04072 Leucine carboxyl methyltransferase 19 200 5.1E-64 T 12-10-2018 IPR007213 Methyltransferase Ppm1/Ppm2/Tcmp GO:0008168|GO:0032259 JDM601_0749 80730a604a9b84b47d45f65443070aa2 304 Gene3D G3DSA:3.40.50.150 2 288 6.2E-89 T 12-10-2018 JDM601_0058 8f12f78a46277e0c8cfea84b2fd9ea8d 499 TIGRFAM TIGR03919 T7SS_EccB: type VII secretion protein EccB 6 467 2.2E-141 T 12-10-2018 IPR007795 Type VII secretion system EccB JDM601_0058 8f12f78a46277e0c8cfea84b2fd9ea8d 499 Gene3D G3DSA:2.40.50.910 243 322 1.8E-23 T 12-10-2018 JDM601_0058 8f12f78a46277e0c8cfea84b2fd9ea8d 499 Pfam PF05108 Type VII secretion system ESX-1, transport TM domain B 5 479 9.5E-149 T 12-10-2018 IPR007795 Type VII secretion system EccB JDM601_0058 8f12f78a46277e0c8cfea84b2fd9ea8d 499 Gene3D G3DSA:2.40.50.900 68 142 4.7E-22 T 12-10-2018 JDM601_3630 e5290dbf8ff4566580e4a31ec77310a2 390 TIGRFAM TIGR00996 Mtu_fam_mce: virulence factor Mce family protein 3 289 3.2E-69 T 12-10-2018 IPR005693 Virulence factor Mce protein JDM601_3630 e5290dbf8ff4566580e4a31ec77310a2 390 Pfam PF11887 Cholesterol uptake porter CUP1 of Mce4, putative 136 379 1.3E-53 T 12-10-2018 IPR024516 Mammalian cell entry, C-terminal JDM601_3630 e5290dbf8ff4566580e4a31ec77310a2 390 Pfam PF02470 MlaD protein 31 107 7.7E-13 T 12-10-2018 IPR003399 Mce/MlaD JDM601_4241 8f40c3f0b22ef8a88e2dc181ff41b2ce 203 SUPERFAMILY SSF54593 13 160 4.85E-9 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase JDM601_4241 8f40c3f0b22ef8a88e2dc181ff41b2ce 203 Gene3D G3DSA:3.10.180.10 18 159 1.1E-23 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase JDM601_4241 8f40c3f0b22ef8a88e2dc181ff41b2ce 203 Pfam PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 22 143 1.6E-18 T 12-10-2018 JDM601_0278 0a7f03c71cf7128e42e0aab62badf340 178 Gene3D G3DSA:2.20.25.90 30 89 1.3E-22 T 12-10-2018 JDM601_0278 0a7f03c71cf7128e42e0aab62badf340 178 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 34 87 1.4E-21 T 12-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 JDM601_0278 0a7f03c71cf7128e42e0aab62badf340 178 SUPERFAMILY SSF53706 29 178 3.66E-46 T 12-10-2018 JDM601_0278 0a7f03c71cf7128e42e0aab62badf340 178 Gene3D G3DSA:3.40.50.740 90 178 8.9E-25 T 12-10-2018 JDM601_0278 0a7f03c71cf7128e42e0aab62badf340 178 SMART SM00926 33 87 7.0E-24 T 12-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 JDM601_3529 4599e29ffcdb7ecb64be066d6c34ccd9 222 SUPERFAMILY SSF109755 2 216 1.02E-52 T 12-10-2018 JDM601_3529 4599e29ffcdb7ecb64be066d6c34ccd9 222 Gene3D G3DSA:1.20.58.220 1 216 1.2E-54 T 12-10-2018 IPR038078 PhoU-like domain superfamily JDM601_3529 4599e29ffcdb7ecb64be066d6c34ccd9 222 Pfam PF01895 PhoU domain 18 103 4.7E-11 T 12-10-2018 IPR026022 PhoU domain JDM601_3529 4599e29ffcdb7ecb64be066d6c34ccd9 222 Pfam PF01895 PhoU domain 122 204 4.3E-11 T 12-10-2018 IPR026022 PhoU domain JDM601_3529 4599e29ffcdb7ecb64be066d6c34ccd9 222 PIRSF PIRSF003107 1 218 9.6E-50 T 12-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 JDM601_3529 4599e29ffcdb7ecb64be066d6c34ccd9 222 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 4 212 7.6E-59 T 12-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 JDM601_1977 b89a60b7d9c9ce89fad846c4d83a8cd0 471 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 308 334 2.7E-44 T 12-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 JDM601_1977 b89a60b7d9c9ce89fad846c4d83a8cd0 471 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 137 150 2.7E-44 T 12-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 JDM601_1977 b89a60b7d9c9ce89fad846c4d83a8cd0 471 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 231 247 2.7E-44 T 12-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 JDM601_1977 b89a60b7d9c9ce89fad846c4d83a8cd0 471 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 213 230 2.7E-44 T 12-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 JDM601_1977 b89a60b7d9c9ce89fad846c4d83a8cd0 471 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 161 189 2.7E-44 T 12-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 JDM601_1977 b89a60b7d9c9ce89fad846c4d83a8cd0 471 SUPERFAMILY SSF51735 9 182 2.36E-42 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_1977 b89a60b7d9c9ce89fad846c4d83a8cd0 471 PIRSF PIRSF000110 3 463 2.4E-145 T 12-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 JDM601_1977 b89a60b7d9c9ce89fad846c4d83a8cd0 471 SUPERFAMILY SSF55347 171 459 4.58E-88 T 12-10-2018 JDM601_1977 b89a60b7d9c9ce89fad846c4d83a8cd0 471 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 9 461 74.419 T 12-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 JDM601_1977 b89a60b7d9c9ce89fad846c4d83a8cd0 471 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 13 179 6.1E-44 T 12-10-2018 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 JDM601_1977 b89a60b7d9c9ce89fad846c4d83a8cd0 471 ProSitePatterns PS00069 Glucose-6-phosphate dehydrogenase active site. 171 177 - T 12-10-2018 IPR019796 Glucose-6-phosphate dehydrogenase, active site GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 JDM601_1977 b89a60b7d9c9ce89fad846c4d83a8cd0 471 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 10 461 3.4E-158 T 12-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 JDM601_1977 b89a60b7d9c9ce89fad846c4d83a8cd0 471 Gene3D G3DSA:3.30.360.10 171 450 3.0E-160 T 12-10-2018 JDM601_1977 b89a60b7d9c9ce89fad846c4d83a8cd0 471 Gene3D G3DSA:3.40.50.720 12 414 3.0E-160 T 12-10-2018 JDM601_1977 b89a60b7d9c9ce89fad846c4d83a8cd0 471 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 184 459 6.5E-89 T 12-10-2018 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 JDM601_3813 1604a8527533f1f07cbed15eae96cfe8 282 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 171 190 2.9E-8 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3813 1604a8527533f1f07cbed15eae96cfe8 282 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 159 2.9E-8 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3813 1604a8527533f1f07cbed15eae96cfe8 282 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 97 108 2.9E-8 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3813 1604a8527533f1f07cbed15eae96cfe8 282 Gene3D G3DSA:3.40.50.720 7 269 5.9E-71 T 12-10-2018 JDM601_3813 1604a8527533f1f07cbed15eae96cfe8 282 SUPERFAMILY SSF51735 20 262 6.18E-68 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_3813 1604a8527533f1f07cbed15eae96cfe8 282 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 31 261 6.7E-53 T 12-10-2018 JDM601_3813 1604a8527533f1f07cbed15eae96cfe8 282 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 227 247 1.7E-30 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3813 1604a8527533f1f07cbed15eae96cfe8 282 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 192 209 1.7E-30 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3813 1604a8527533f1f07cbed15eae96cfe8 282 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 145 161 1.7E-30 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3813 1604a8527533f1f07cbed15eae96cfe8 282 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 23 40 1.7E-30 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3813 1604a8527533f1f07cbed15eae96cfe8 282 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 97 108 1.7E-30 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3813 1604a8527533f1f07cbed15eae96cfe8 282 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 190 1.7E-30 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3868 eff2d01b28f21816d4c8123f2518dd69 286 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 22 267 3.1E-39 T 12-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 JDM601_3868 eff2d01b28f21816d4c8123f2518dd69 286 Gene3D G3DSA:3.20.20.190 6 281 1.8E-82 T 12-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 JDM601_3868 eff2d01b28f21816d4c8123f2518dd69 286 SUPERFAMILY SSF51695 19 274 1.83E-59 T 12-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 JDM601_2002 d2c0862a6cd03c3a49a144ffae089eb2 216 SUPERFAMILY SSF109604 22 141 7.42E-17 T 12-10-2018 JDM601_2002 d2c0862a6cd03c3a49a144ffae089eb2 216 Gene3D G3DSA:1.10.3210.10 12 172 6.5E-14 T 12-10-2018 JDM601_2002 d2c0862a6cd03c3a49a144ffae089eb2 216 Pfam PF01966 HD domain 36 121 4.5E-10 T 12-10-2018 IPR006674 HD domain JDM601_2456 dc7660e1d7577820c82f9376578eae2e 152 Pfam PF08768 Domain of unknown function (DUF1794) 2 150 1.6E-41 T 12-10-2018 IPR014878 Domain of unknown function DUF1794 JDM601_2456 dc7660e1d7577820c82f9376578eae2e 152 SUPERFAMILY SSF50814 3 150 2.66E-41 T 12-10-2018 IPR012674 Calycin JDM601_2456 dc7660e1d7577820c82f9376578eae2e 152 Gene3D G3DSA:2.40.128.20 1 152 3.7E-56 T 12-10-2018 IPR012674 Calycin JDM601_2854 b695bedfba5028c97428c70ff5096f64 299 Pfam PF00682 HMGL-like 5 272 8.6E-35 T 12-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 JDM601_2854 b695bedfba5028c97428c70ff5096f64 299 Gene3D G3DSA:3.20.20.70 1 297 6.0E-96 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JDM601_2854 b695bedfba5028c97428c70ff5096f64 299 SUPERFAMILY SSF51569 2 295 5.27E-58 T 12-10-2018 JDM601_1574 c096367d8813c64679a8d47bb039efbb 241 Pfam PF14032 PknH-like extracellular domain 25 236 1.8E-30 T 12-10-2018 IPR026954 PknH-like extracellular domain KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1 JDM601_1574 c096367d8813c64679a8d47bb039efbb 241 Gene3D G3DSA:3.40.1000.70 23 239 3.2E-23 T 12-10-2018 IPR038232 PknH-like extracellular domain superfamily KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1 JDM601_2689 983de33fbe589d77aada943cf6518a1a 231 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 7.4E-13 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 JDM601_2689 983de33fbe589d77aada943cf6518a1a 231 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 7.4E-13 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 JDM601_2689 983de33fbe589d77aada943cf6518a1a 231 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 7.4E-13 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 JDM601_2689 983de33fbe589d77aada943cf6518a1a 231 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 12-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 JDM601_2689 983de33fbe589d77aada943cf6518a1a 231 SMART SM00411 1 90 3.9E-35 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 JDM601_2689 983de33fbe589d77aada943cf6518a1a 231 Gene3D G3DSA:4.10.520.10 1 99 2.2E-33 T 12-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 JDM601_2689 983de33fbe589d77aada943cf6518a1a 231 Pfam PF00216 Bacterial DNA-binding protein 1 89 2.3E-25 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 JDM601_2689 983de33fbe589d77aada943cf6518a1a 231 SUPERFAMILY SSF47729 1 92 6.92E-27 T 12-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 JDM601_2910 83b660fd1b43fc5d36f9097c88544503 448 Pfam PF03109 ABC1 family 113 227 1.6E-30 T 12-10-2018 IPR004147 UbiB domain JDM601_2910 83b660fd1b43fc5d36f9097c88544503 448 Pfam PF01636 Phosphotransferase enzyme family 268 307 1.4E-6 T 12-10-2018 IPR002575 Aminoglycoside phosphotransferase JDM601_2910 83b660fd1b43fc5d36f9097c88544503 448 SUPERFAMILY SSF56112 95 376 1.14E-26 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily JDM601_2979 a34db2dc9c34a17fd98e9e8476e15daa 569 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 486 568 1.8E-9 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JDM601_2979 a34db2dc9c34a17fd98e9e8476e15daa 569 SMART SM00387 480 569 9.4E-11 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase JDM601_2979 a34db2dc9c34a17fd98e9e8476e15daa 569 Gene3D G3DSA:3.30.565.10 442 568 3.1E-33 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JDM601_2979 a34db2dc9c34a17fd98e9e8476e15daa 569 SUPERFAMILY SSF55781 207 389 2.05E-18 T 12-10-2018 JDM601_2979 a34db2dc9c34a17fd98e9e8476e15daa 569 Pfam PF13185 GAF domain 58 196 1.6E-15 T 12-10-2018 IPR003018 GAF domain GO:0005515 JDM601_2979 a34db2dc9c34a17fd98e9e8476e15daa 569 Pfam PF13185 GAF domain 225 362 5.7E-8 T 12-10-2018 IPR003018 GAF domain GO:0005515 JDM601_2979 a34db2dc9c34a17fd98e9e8476e15daa 569 Pfam PF07730 Histidine kinase 379 439 5.7E-10 T 12-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 JDM601_2979 a34db2dc9c34a17fd98e9e8476e15daa 569 SUPERFAMILY SSF55874 465 568 6.94E-17 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JDM601_2979 a34db2dc9c34a17fd98e9e8476e15daa 569 SMART SM00065 226 371 0.0011 T 12-10-2018 IPR003018 GAF domain GO:0005515 JDM601_2979 a34db2dc9c34a17fd98e9e8476e15daa 569 SMART SM00065 58 205 1.8E-20 T 12-10-2018 IPR003018 GAF domain GO:0005515 JDM601_2979 a34db2dc9c34a17fd98e9e8476e15daa 569 SUPERFAMILY SSF55781 40 224 1.44E-38 T 12-10-2018 JDM601_2979 a34db2dc9c34a17fd98e9e8476e15daa 569 Gene3D G3DSA:3.30.450.40 54 205 7.3E-57 T 12-10-2018 IPR029016 GAF-like domain superfamily JDM601_2979 a34db2dc9c34a17fd98e9e8476e15daa 569 Gene3D G3DSA:3.30.450.40 226 378 2.0E-27 T 12-10-2018 IPR029016 GAF-like domain superfamily JDM601_2071 ac0721b27afd12d9ba418e009a601665 166 Pfam PF01661 Macro domain 20 131 8.1E-32 T 12-10-2018 IPR002589 Macro domain JDM601_2071 ac0721b27afd12d9ba418e009a601665 166 Gene3D G3DSA:3.40.220.10 1 165 2.4E-53 T 12-10-2018 JDM601_2071 ac0721b27afd12d9ba418e009a601665 166 SUPERFAMILY SSF52949 3 162 6.9E-47 T 12-10-2018 JDM601_2071 ac0721b27afd12d9ba418e009a601665 166 SMART SM00506 3 133 1.7E-35 T 12-10-2018 IPR002589 Macro domain JDM601_2454 f8406c586c39402ac5a4749cb74f5f98 360 Pfam PF13830 Domain of unknown function (DUF4192) 21 329 3.2E-87 T 12-10-2018 IPR025447 Protein of unknown function DUF4192 JDM601_0411 0a2a4596cd0c0d30e5c1e0a75e84a578 428 Pfam PF00067 Cytochrome P450 262 386 2.2E-17 T 12-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_0411 0a2a4596cd0c0d30e5c1e0a75e84a578 428 PRINTS PR00359 B-class P450 signature 290 301 3.1E-38 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_0411 0a2a4596cd0c0d30e5c1e0a75e84a578 428 PRINTS PR00359 B-class P450 signature 102 113 3.1E-38 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_0411 0a2a4596cd0c0d30e5c1e0a75e84a578 428 PRINTS PR00359 B-class P450 signature 165 180 3.1E-38 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_0411 0a2a4596cd0c0d30e5c1e0a75e84a578 428 PRINTS PR00359 B-class P450 signature 148 164 3.1E-38 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_0411 0a2a4596cd0c0d30e5c1e0a75e84a578 428 PRINTS PR00359 B-class P450 signature 335 350 3.1E-38 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_0411 0a2a4596cd0c0d30e5c1e0a75e84a578 428 PRINTS PR00359 B-class P450 signature 366 377 3.1E-38 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_0411 0a2a4596cd0c0d30e5c1e0a75e84a578 428 PRINTS PR00359 B-class P450 signature 357 366 3.1E-38 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_0411 0a2a4596cd0c0d30e5c1e0a75e84a578 428 PRINTS PR00359 B-class P450 signature 307 334 3.1E-38 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_0411 0a2a4596cd0c0d30e5c1e0a75e84a578 428 PRINTS PR00359 B-class P450 signature 208 230 3.1E-38 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_0411 0a2a4596cd0c0d30e5c1e0a75e84a578 428 Gene3D G3DSA:1.10.630.10 2 428 5.0E-96 T 12-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_0411 0a2a4596cd0c0d30e5c1e0a75e84a578 428 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 359 368 - T 12-10-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 JDM601_0411 0a2a4596cd0c0d30e5c1e0a75e84a578 428 SUPERFAMILY SSF48264 16 424 2.75E-75 T 12-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_2381 e3115c87b87578345d1e9f08e26961c2 269 SUPERFAMILY SSF52540 6 210 2.13E-23 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_2381 e3115c87b87578345d1e9f08e26961c2 269 Gene3D G3DSA:3.40.50.300 2 243 1.8E-23 T 12-10-2018 JDM601_2381 e3115c87b87578345d1e9f08e26961c2 269 Pfam PF13469 Sulfotransferase family 6 202 8.2E-18 T 12-10-2018 JDM601_0632 000d982cc2991f88674231b9b190a8a4 326 Pfam PF00149 Calcineurin-like phosphoesterase 11 143 5.0E-10 T 12-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 JDM601_0632 000d982cc2991f88674231b9b190a8a4 326 SUPERFAMILY SSF56300 9 154 5.21E-32 T 12-10-2018 JDM601_1952 b03daaeb7f5a4b4252392e39a427a4e7 121 Pfam PF05423 Mycobacterium membrane protein 30 116 1.0E-5 T 12-10-2018 IPR008693 Transport accessory protein MmpS JDM601_1952 b03daaeb7f5a4b4252392e39a427a4e7 121 Gene3D G3DSA:2.60.40.2880 28 119 8.0E-13 T 12-10-2018 IPR038468 Transport accessory protein MmpS, soluble domain superfamily JDM601_1288 27f3396484e8bffd841b2bb8263405e8 305 Gene3D G3DSA:3.20.20.30 1 296 2.5E-63 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 JDM601_1288 27f3396484e8bffd841b2bb8263405e8 305 Pfam PF00296 Luciferase-like monooxygenase 22 241 8.6E-46 T 12-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 JDM601_1288 27f3396484e8bffd841b2bb8263405e8 305 SUPERFAMILY SSF51679 2 297 6.67E-65 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 JDM601_1288 27f3396484e8bffd841b2bb8263405e8 305 TIGRFAM TIGR03560 F420_Rv1855c: probable F420-dependent oxidoreductase, Rv1855c family 11 233 1.8E-88 T 12-10-2018 IPR019952 F420-dependent oxidoreductase-predicted, Rv1855c JDM601_2439 70156ecc3e2d05f84931ef94da42c28c 154 SUPERFAMILY SSF51283 5 149 4.45E-44 T 12-10-2018 IPR036157 dUTPase-like superfamily JDM601_2439 70156ecc3e2d05f84931ef94da42c28c 154 Pfam PF00692 dUTPase 15 148 3.8E-28 T 12-10-2018 IPR029054 dUTPase-like JDM601_2439 70156ecc3e2d05f84931ef94da42c28c 154 TIGRFAM TIGR00576 dut: dUTP diphosphatase 5 149 3.6E-48 T 12-10-2018 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|KEGG: 00983+3.6.1.23 JDM601_2439 70156ecc3e2d05f84931ef94da42c28c 154 Gene3D G3DSA:2.70.40.10 1 154 3.7E-53 T 12-10-2018 IPR036157 dUTPase-like superfamily JDM601_2439 70156ecc3e2d05f84931ef94da42c28c 154 Hamap MF_00116 Deoxyuridine 5'-triphosphate nucleotidohydrolase [dut]. 3 150 30.255 T 12-10-2018 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|KEGG: 00983+3.6.1.23 JDM601_2388 8d121b9767abdce880f875a513a9dacf 286 Hamap MF_01824 Pyridoxal 5'-phosphate synthase subunit PdxS [pdxS]. 1 286 51.65 T 12-10-2018 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ GO:0042819|GO:0042823 KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 JDM601_2388 8d121b9767abdce880f875a513a9dacf 286 Pfam PF01680 SOR/SNZ family 1 204 4.1E-106 T 12-10-2018 IPR033755 PdxS/SNZ N-terminal domain KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 JDM601_2388 8d121b9767abdce880f875a513a9dacf 286 Gene3D G3DSA:3.20.20.70 1 286 5.0E-150 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JDM601_2388 8d121b9767abdce880f875a513a9dacf 286 TIGRFAM TIGR00343 TIGR00343: pyridoxal 5'-phosphate synthase, synthase subunit Pdx1 1 286 5.5E-144 T 12-10-2018 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ GO:0042819|GO:0042823 KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 JDM601_2388 8d121b9767abdce880f875a513a9dacf 286 PIRSF PIRSF029271 1 286 6.6E-148 T 12-10-2018 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ GO:0042819|GO:0042823 KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 JDM601_2388 8d121b9767abdce880f875a513a9dacf 286 SUPERFAMILY SSF51366 10 260 5.65E-61 T 12-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 JDM601_2388 8d121b9767abdce880f875a513a9dacf 286 ProSitePatterns PS01235 PdxS/SNZ family signature. 197 215 - T 12-10-2018 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ GO:0042819|GO:0042823 KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 JDM601_1436 fe60bdb70af3b0299b87c408a4c5eb9d 211 Gene3D G3DSA:3.30.40.60 105 191 1.3E-20 T 12-10-2018 JDM601_1436 fe60bdb70af3b0299b87c408a4c5eb9d 211 Pfam PF14279 HNH endonuclease 127 173 1.6E-12 T 12-10-2018 IPR029471 HNH endonuclease 5 JDM601_1436 fe60bdb70af3b0299b87c408a4c5eb9d 211 SMART SM00507 114 163 1.7E-15 T 12-10-2018 IPR003615 HNH nuclease JDM601_1692 472ffe1473a8fb33253e6db07c7c25bf 368 Hamap MF_00259 Aminomethyltransferase [gcvT]. 3 365 40.233 T 12-10-2018 IPR022903 Glycine cleavage system T protein, bacteria GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 JDM601_1692 472ffe1473a8fb33253e6db07c7c25bf 368 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 268 359 5.3E-20 T 12-10-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 JDM601_1692 472ffe1473a8fb33253e6db07c7c25bf 368 Gene3D G3DSA:3.30.1360.120 8 237 2.2E-72 T 12-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 JDM601_1692 472ffe1473a8fb33253e6db07c7c25bf 368 PIRSF PIRSF006487 2 368 1.3E-81 T 12-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 JDM601_1692 472ffe1473a8fb33253e6db07c7c25bf 368 Pfam PF01571 Aminomethyltransferase folate-binding domain 9 261 2.9E-82 T 12-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain JDM601_1692 472ffe1473a8fb33253e6db07c7c25bf 368 SUPERFAMILY SSF103025 4 282 3.92E-85 T 12-10-2018 JDM601_1692 472ffe1473a8fb33253e6db07c7c25bf 368 Gene3D G3DSA:3.30.70.1400 53 138 2.2E-72 T 12-10-2018 JDM601_1692 472ffe1473a8fb33253e6db07c7c25bf 368 Gene3D G3DSA:4.10.1250.10 241 280 9.0E-13 T 12-10-2018 JDM601_1692 472ffe1473a8fb33253e6db07c7c25bf 368 SUPERFAMILY SSF101790 275 365 2.78E-21 T 12-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal JDM601_1692 472ffe1473a8fb33253e6db07c7c25bf 368 Gene3D G3DSA:2.40.30.110 284 368 7.8E-22 T 12-10-2018 JDM601_1692 472ffe1473a8fb33253e6db07c7c25bf 368 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 5 364 2.5E-89 T 12-10-2018 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 JDM601_2938 c21339ac385d989fc148637f28d6d745 164 Gene3D G3DSA:3.30.750.24 34 151 1.9E-19 T 12-10-2018 IPR036513 STAS domain superfamily JDM601_2938 c21339ac385d989fc148637f28d6d745 164 TIGRFAM TIGR00377 ant_ant_sig: anti-anti-sigma factor 38 144 1.6E-21 T 12-10-2018 IPR003658 Anti-sigma factor antagonist GO:0006355|GO:0045152 JDM601_2938 c21339ac385d989fc148637f28d6d745 164 Pfam PF01740 STAS domain 44 147 2.5E-12 T 12-10-2018 IPR002645 STAS domain JDM601_2938 c21339ac385d989fc148637f28d6d745 164 SUPERFAMILY SSF52091 42 148 8.44E-15 T 12-10-2018 IPR036513 STAS domain superfamily JDM601_0139 3a0123204f86af785626c35a0b608d27 348 TIGRFAM TIGR00996 Mtu_fam_mce: virulence factor Mce family protein 2 255 4.0E-50 T 12-10-2018 IPR005693 Virulence factor Mce protein JDM601_0139 3a0123204f86af785626c35a0b608d27 348 Pfam PF02470 MlaD protein 25 96 3.1E-16 T 12-10-2018 IPR003399 Mce/MlaD JDM601_2852 d4bca36794684bda1b12067317e9dc34 394 SUPERFAMILY SSF53474 37 387 2.59E-27 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_2852 d4bca36794684bda1b12067317e9dc34 394 Pfam PF12697 Alpha/beta hydrolase family 51 373 4.3E-9 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 JDM601_1708 1de5eb6732c3f6a79ade64167044b83f 390 Pfam PF00355 Rieske [2Fe-2S] domain 305 362 1.4E-8 T 12-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 JDM601_1708 1de5eb6732c3f6a79ade64167044b83f 390 Gene3D G3DSA:2.102.10.10 221 387 3.5E-31 T 12-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 JDM601_1708 1de5eb6732c3f6a79ade64167044b83f 390 SUPERFAMILY SSF50022 293 388 1.96E-23 T 12-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 JDM601_3916 e3b19a93c0f2ea8c173a0bcdada09c60 229 Gene3D G3DSA:3.90.550.10 2 229 5.9E-36 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases JDM601_3916 e3b19a93c0f2ea8c173a0bcdada09c60 229 Pfam PF00535 Glycosyl transferase family 2 7 128 4.7E-22 T 12-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 JDM601_3916 e3b19a93c0f2ea8c173a0bcdada09c60 229 SUPERFAMILY SSF53448 2 210 1.31E-30 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases JDM601_2894 ec05ccdf1e6f928be5fa8448eb4c2261 342 TIGRFAM TIGR00996 Mtu_fam_mce: virulence factor Mce family protein 11 257 2.6E-51 T 12-10-2018 IPR005693 Virulence factor Mce protein JDM601_2894 ec05ccdf1e6f928be5fa8448eb4c2261 342 Pfam PF02470 MlaD protein 30 104 3.3E-17 T 12-10-2018 IPR003399 Mce/MlaD JDM601_0083 818883dd87fe6b70c59c3110c47644c5 370 SUPERFAMILY SSF53474 23 369 4.37E-21 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_0083 818883dd87fe6b70c59c3110c47644c5 370 Gene3D G3DSA:3.40.50.1820 248 370 5.0E-8 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_0083 818883dd87fe6b70c59c3110c47644c5 370 Gene3D G3DSA:3.40.50.1820 7 233 3.6E-9 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_1336 002798e2c7c868dba7eeedec776a7090 440 SUPERFAMILY SSF54675 9 135 2.75E-35 T 12-10-2018 JDM601_1336 002798e2c7c868dba7eeedec776a7090 440 Pfam PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family 154 210 1.3E-4 T 12-10-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 JDM601_1336 002798e2c7c868dba7eeedec776a7090 440 SUPERFAMILY SSF51690 137 430 1.18E-77 T 12-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 JDM601_1336 002798e2c7c868dba7eeedec776a7090 440 PIRSF PIRSF000484 2 434 3.4E-94 T 12-10-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 JDM601_1336 002798e2c7c868dba7eeedec776a7090 440 Gene3D G3DSA:3.20.20.70 149 316 3.9E-96 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JDM601_1336 002798e2c7c868dba7eeedec776a7090 440 Gene3D G3DSA:3.20.140.10 10 371 3.9E-96 T 12-10-2018 JDM601_1336 002798e2c7c868dba7eeedec776a7090 440 TIGRFAM TIGR01513 NAPRTase_put: nicotinate phosphoribosyltransferase 9 394 6.7E-129 T 12-10-2018 IPR006405 Nicotinate phosphoribosyltransferase pncB-type GO:0004516|GO:0019358 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264|Reactome: R-HSA-6798695 JDM601_2040 6ae99ab03c2612c0922e513aaa7e2506 104 Pfam PF12802 MarR family 2 41 9.7E-9 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 JDM601_2040 6ae99ab03c2612c0922e513aaa7e2506 104 PRINTS PR00598 Bacterial regulatory protein MarR family signature 37 53 1.2E-5 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 JDM601_2040 6ae99ab03c2612c0922e513aaa7e2506 104 PRINTS PR00598 Bacterial regulatory protein MarR family signature 1 17 1.2E-5 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 JDM601_2040 6ae99ab03c2612c0922e513aaa7e2506 104 PRINTS PR00598 Bacterial regulatory protein MarR family signature 18 33 1.2E-5 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 JDM601_2040 6ae99ab03c2612c0922e513aaa7e2506 104 PRINTS PR00598 Bacterial regulatory protein MarR family signature 68 88 1.2E-5 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 JDM601_2040 6ae99ab03c2612c0922e513aaa7e2506 104 Gene3D G3DSA:1.10.10.10 1 101 2.6E-24 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JDM601_2040 6ae99ab03c2612c0922e513aaa7e2506 104 SUPERFAMILY SSF46785 1 92 2.64E-19 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JDM601_0850 8d51e30bb3b6617d37394babb43c95aa 130 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 10 60 4.8E-7 T 12-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 JDM601_0850 8d51e30bb3b6617d37394babb43c95aa 130 TIGRFAM TIGR03666 Rv2061_F420: PPOX class probable F420-dependent enzyme, Rv2061 family 2 127 8.7E-48 T 12-10-2018 IPR019965 PPOX class F420-dependent enzyme, family Rv2061, putative JDM601_0850 8d51e30bb3b6617d37394babb43c95aa 130 SUPERFAMILY SSF50475 10 115 1.2E-17 T 12-10-2018 JDM601_0850 8d51e30bb3b6617d37394babb43c95aa 130 Gene3D G3DSA:2.30.110.10 5 130 1.4E-12 T 12-10-2018 IPR012349 FMN-binding split barrel GO:0048037 JDM601_3366 13c5a5fc9edbf086b94cf9024a1fff14 265 SUPERFAMILY SSF54637 15 101 1.11E-7 T 12-10-2018 IPR029069 HotDog domain superfamily JDM601_3366 13c5a5fc9edbf086b94cf9024a1fff14 265 Pfam PF13622 Thioesterase-like superfamily 20 241 9.0E-20 T 12-10-2018 JDM601_3366 13c5a5fc9edbf086b94cf9024a1fff14 265 Gene3D G3DSA:3.10.129.90 15 207 2.2E-14 T 12-10-2018 JDM601_2226 67871d94ad1eca1a1f0f3331db663b57 127 Pfam PF13564 DoxX-like family 11 109 1.3E-8 T 12-10-2018 IPR032808 DoxX family JDM601_4064 07a842e8a2c3580d201a95deb8275faf 123 Pfam PF01850 PIN domain 4 117 1.3E-17 T 12-10-2018 IPR002716 PIN domain JDM601_4064 07a842e8a2c3580d201a95deb8275faf 123 SUPERFAMILY SSF88723 4 121 1.4E-20 T 12-10-2018 IPR029060 PIN-like domain superfamily JDM601_4064 07a842e8a2c3580d201a95deb8275faf 123 Gene3D G3DSA:3.40.50.1010 1 120 1.8E-13 T 12-10-2018 JDM601_3016 e1c5b745569db333a3b30f07e895beba 294 Gene3D G3DSA:3.90.550.10 3 240 1.2E-37 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases JDM601_3016 e1c5b745569db333a3b30f07e895beba 294 SUPERFAMILY SSF53448 5 235 5.28E-42 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases JDM601_3016 e1c5b745569db333a3b30f07e895beba 294 Pfam PF00535 Glycosyl transferase family 2 7 192 3.9E-15 T 12-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 JDM601_3655 554a1a154445386e0031c41daa32c020 104 ProDom PD069409 MB2104 RV2078/MT2139 1 98 3.0E-14 T 12-10-2018 IPR022534 Protein of unknown function DUF2563 JDM601_3655 554a1a154445386e0031c41daa32c020 104 Pfam PF10817 Protein of unknown function (DUF2563) 1 104 4.2E-32 T 12-10-2018 IPR022534 Protein of unknown function DUF2563 JDM601_0020 54f9da3c0728d0e3179774732c73cc54 155 SMART SM00240 82 132 2.7E-12 T 12-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 JDM601_0020 54f9da3c0728d0e3179774732c73cc54 155 Gene3D G3DSA:2.60.200.20 52 155 2.8E-27 T 12-10-2018 JDM601_0020 54f9da3c0728d0e3179774732c73cc54 155 Pfam PF16697 Inner membrane component of T3SS, cytoplasmic domain 66 153 1.5E-15 T 12-10-2018 IPR032030 YscD, cytoplasmic domain JDM601_0020 54f9da3c0728d0e3179774732c73cc54 155 SUPERFAMILY SSF49879 39 153 8.8E-25 T 12-10-2018 IPR008984 SMAD/FHA domain superfamily GO:0005515 JDM601_2362 5f1dc51378f4bd8bd882fb2221ea0a2c 289 PRINTS PR00146 Dihydrodipicolinate synthase signature 37 58 2.5E-7 T 12-10-2018 IPR002220 DapA-like GO:0016829 JDM601_2362 5f1dc51378f4bd8bd882fb2221ea0a2c 289 PRINTS PR00146 Dihydrodipicolinate synthase signature 73 91 2.5E-7 T 12-10-2018 IPR002220 DapA-like GO:0016829 JDM601_2362 5f1dc51378f4bd8bd882fb2221ea0a2c 289 PRINTS PR00146 Dihydrodipicolinate synthase signature 130 147 2.5E-7 T 12-10-2018 IPR002220 DapA-like GO:0016829 JDM601_2362 5f1dc51378f4bd8bd882fb2221ea0a2c 289 SMART SM01130 4 289 4.2E-90 T 12-10-2018 IPR002220 DapA-like GO:0016829 JDM601_2362 5f1dc51378f4bd8bd882fb2221ea0a2c 289 PIRSF PIRSF001365 2 289 4.9E-77 T 12-10-2018 IPR002220 DapA-like GO:0016829 JDM601_2362 5f1dc51378f4bd8bd882fb2221ea0a2c 289 Pfam PF00701 Dihydrodipicolinate synthetase family 5 288 1.6E-53 T 12-10-2018 IPR002220 DapA-like GO:0016829 JDM601_2362 5f1dc51378f4bd8bd882fb2221ea0a2c 289 SUPERFAMILY SSF51569 4 288 1.15E-80 T 12-10-2018 JDM601_2362 5f1dc51378f4bd8bd882fb2221ea0a2c 289 Gene3D G3DSA:3.20.20.70 3 289 1.0E-94 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JDM601_3565 846902af1241400426921566585be155 420 SUPERFAMILY SSF50022 14 166 2.62E-40 T 12-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 JDM601_3565 846902af1241400426921566585be155 420 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 30 55 1.5E-5 T 12-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 JDM601_3565 846902af1241400426921566585be155 420 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 83 103 1.5E-5 T 12-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 JDM601_3565 846902af1241400426921566585be155 420 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 189 211 1.5E-5 T 12-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 JDM601_3565 846902af1241400426921566585be155 420 Gene3D G3DSA:2.102.10.10 43 172 2.0E-56 T 12-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 JDM601_3565 846902af1241400426921566585be155 420 SUPERFAMILY SSF55961 171 412 1.57E-37 T 12-10-2018 JDM601_3565 846902af1241400426921566585be155 420 Pfam PF00355 Rieske [2Fe-2S] domain 46 137 5.7E-15 T 12-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 JDM601_3565 846902af1241400426921566585be155 420 Gene3D G3DSA:3.90.380.10 30 379 2.0E-56 T 12-10-2018 JDM601_3565 846902af1241400426921566585be155 420 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 189 411 9.5E-44 T 12-10-2018 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0044237|GO:0051537|GO:0055114 JDM601_1569 bef79c379f83fbc64e2d3cba90a3134a 118 Pfam PF01022 Bacterial regulatory protein, arsR family 42 86 8.1E-15 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 JDM601_1569 bef79c379f83fbc64e2d3cba90a3134a 118 SUPERFAMILY SSF46785 20 106 2.87E-24 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JDM601_1569 bef79c379f83fbc64e2d3cba90a3134a 118 SMART SM00418 34 112 1.3E-27 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 JDM601_1569 bef79c379f83fbc64e2d3cba90a3134a 118 Gene3D G3DSA:1.10.10.10 11 118 2.9E-27 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JDM601_1569 bef79c379f83fbc64e2d3cba90a3134a 118 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 36 51 1.3E-14 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 JDM601_1569 bef79c379f83fbc64e2d3cba90a3134a 118 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 83 98 1.3E-14 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 JDM601_1569 bef79c379f83fbc64e2d3cba90a3134a 118 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 55 66 1.3E-14 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 JDM601_1569 bef79c379f83fbc64e2d3cba90a3134a 118 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 68 83 1.3E-14 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 JDM601_3406 feb73a7d4c9588cee7d9bfa0e4fe295f 228 SMART SM00895 84 206 6.9E-19 T 12-10-2018 IPR011711 GntR, C-terminal JDM601_3406 feb73a7d4c9588cee7d9bfa0e4fe295f 228 Gene3D G3DSA:1.20.120.530 77 214 2.2E-24 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal JDM601_3406 feb73a7d4c9588cee7d9bfa0e4fe295f 228 SMART SM00345 16 74 1.5E-9 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 JDM601_3406 feb73a7d4c9588cee7d9bfa0e4fe295f 228 Pfam PF07729 FCD domain 85 205 7.4E-25 T 12-10-2018 IPR011711 GntR, C-terminal JDM601_3406 feb73a7d4c9588cee7d9bfa0e4fe295f 228 SUPERFAMILY SSF48008 81 213 1.49E-21 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal JDM601_3406 feb73a7d4c9588cee7d9bfa0e4fe295f 228 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 74 1.3E-13 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 JDM601_3406 feb73a7d4c9588cee7d9bfa0e4fe295f 228 Gene3D G3DSA:1.10.10.10 9 74 8.7E-18 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JDM601_3406 feb73a7d4c9588cee7d9bfa0e4fe295f 228 SUPERFAMILY SSF46785 10 78 3.15E-16 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JDM601_2399 05dcb55af9cefba073250db1a19f5715 165 Pfam PF09348 Domain of unknown function (DUF1990) 12 164 8.9E-57 T 12-10-2018 IPR018960 Domain of unknown function DUF1990 JDM601_2399 05dcb55af9cefba073250db1a19f5715 165 PIRSF PIRSF010260 1 165 3.7E-59 T 12-10-2018 IPR014457 Uncharacterised conserved protein UCP010260 JDM601_2622 c5fdd186965777b2493882d5c0123fae 223 Gene3D G3DSA:3.40.630.30 94 208 5.8E-9 T 12-10-2018 JDM601_2622 c5fdd186965777b2493882d5c0123fae 223 SUPERFAMILY SSF55729 3 208 9.04E-12 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase JDM601_2622 c5fdd186965777b2493882d5c0123fae 223 SUPERFAMILY SSF56719 5 88 1.7E-5 T 12-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 JDM601_2622 c5fdd186965777b2493882d5c0123fae 223 Gene3D G3DSA:1.10.268.10 4 88 4.1E-9 T 12-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 JDM601_3026 11cdcf32f6a796174eb38f7ce3d43b90 397 Gene3D G3DSA:3.30.1540.10 242 333 7.1E-106 T 12-10-2018 JDM601_3026 11cdcf32f6a796174eb38f7ce3d43b90 397 Gene3D G3DSA:3.40.50.10540 9 354 7.1E-106 T 12-10-2018 IPR023606 CoA-transferase family III domain superfamily JDM601_3026 11cdcf32f6a796174eb38f7ce3d43b90 397 SUPERFAMILY SSF89796 8 392 9.29E-109 T 12-10-2018 IPR023606 CoA-transferase family III domain superfamily JDM601_3026 11cdcf32f6a796174eb38f7ce3d43b90 397 Pfam PF02515 CoA-transferase family III 10 387 8.0E-115 T 12-10-2018 IPR003673 CoA-transferase family III GO:0003824 JDM601_0794 c14154ec96c1fbff2e9d9b684411a30c 145 SUPERFAMILY SSF54690 13 143 3.4E-37 T 12-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 JDM601_0794 c14154ec96c1fbff2e9d9b684411a30c 145 Pfam PF02391 MoaE protein 13 125 2.3E-33 T 12-10-2018 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 JDM601_0794 c14154ec96c1fbff2e9d9b684411a30c 145 Gene3D G3DSA:3.90.1170.40 5 144 1.1E-43 T 12-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 JDM601_4309 eac1d38b3b24a236f3b4bf5810fcb543 530 Pfam PF09594 Glycosyltransferase family 87 188 408 6.4E-16 T 12-10-2018 IPR018584 Glycosyltransferase family 87 GO:0016758 JDM601_4309 eac1d38b3b24a236f3b4bf5810fcb543 530 PIRSF PIRSF010361 18 512 4.0E-173 T 12-10-2018 IPR016570 Uncharacterised conserved protein UCP010361, membrane JDM601_3660 a069e26e8a08bb883c0f09680dee96dc 330 Pfam PF01796 DUF35 OB-fold domain, acyl-CoA-associated 77 140 1.6E-8 T 12-10-2018 IPR002878 Domain of unknown function DUF35, OB-fold, C-terminal JDM601_3660 a069e26e8a08bb883c0f09680dee96dc 330 Pfam PF01796 DUF35 OB-fold domain, acyl-CoA-associated 233 298 3.8E-14 T 12-10-2018 IPR002878 Domain of unknown function DUF35, OB-fold, C-terminal JDM601_3660 a069e26e8a08bb883c0f09680dee96dc 330 SUPERFAMILY SSF50249 170 304 1.71E-29 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold JDM601_3660 a069e26e8a08bb883c0f09680dee96dc 330 Gene3D G3DSA:1.10.12.20 21 79 4.8E-9 T 12-10-2018 JDM601_3660 a069e26e8a08bb883c0f09680dee96dc 330 Gene3D G3DSA:1.10.12.20 163 236 5.1E-7 T 12-10-2018 JDM601_3660 a069e26e8a08bb883c0f09680dee96dc 330 SUPERFAMILY SSF50249 15 149 2.57E-27 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold JDM601_3127 3c9be9ca7b38a8414d04b80254b01492 163 Gene3D G3DSA:3.10.490.10 2 160 2.0E-40 T 12-10-2018 JDM601_3127 3c9be9ca7b38a8414d04b80254b01492 163 SUPERFAMILY SSF110857 3 131 1.01E-15 T 12-10-2018 IPR036568 Gamma-glutamyl cyclotransferase-like superfamily JDM601_3127 3c9be9ca7b38a8414d04b80254b01492 163 Pfam PF13772 AIG2-like family 59 151 6.2E-22 T 12-10-2018 JDM601_2976 e09bfe3728406e777127cabe549eadb5 265 SUPERFAMILY SSF117892 53 186 8.24E-40 T 12-10-2018 IPR036013 Band 7/SPFH domain superfamily JDM601_2976 e09bfe3728406e777127cabe549eadb5 265 Gene3D G3DSA:3.30.479.30 50 181 1.5E-46 T 12-10-2018 JDM601_2976 e09bfe3728406e777127cabe549eadb5 265 Pfam PF01145 SPFH domain / Band 7 family 27 195 3.9E-33 T 12-10-2018 IPR001107 Band 7 domain JDM601_2976 e09bfe3728406e777127cabe549eadb5 265 SMART SM00244 22 179 7.5E-54 T 12-10-2018 IPR001107 Band 7 domain JDM601_2976 e09bfe3728406e777127cabe549eadb5 265 PRINTS PR00721 Stomatin signature 29 51 2.1E-60 T 12-10-2018 IPR001972 Stomatin family GO:0016020 JDM601_2976 e09bfe3728406e777127cabe549eadb5 265 PRINTS PR00721 Stomatin signature 199 222 2.1E-60 T 12-10-2018 IPR001972 Stomatin family GO:0016020 JDM601_2976 e09bfe3728406e777127cabe549eadb5 265 PRINTS PR00721 Stomatin signature 131 154 2.1E-60 T 12-10-2018 IPR001972 Stomatin family GO:0016020 JDM601_2976 e09bfe3728406e777127cabe549eadb5 265 PRINTS PR00721 Stomatin signature 111 128 2.1E-60 T 12-10-2018 IPR001972 Stomatin family GO:0016020 JDM601_2976 e09bfe3728406e777127cabe549eadb5 265 PRINTS PR00721 Stomatin signature 76 97 2.1E-60 T 12-10-2018 IPR001972 Stomatin family GO:0016020 JDM601_2976 e09bfe3728406e777127cabe549eadb5 265 PRINTS PR00721 Stomatin signature 155 173 2.1E-60 T 12-10-2018 IPR001972 Stomatin family GO:0016020 JDM601_2976 e09bfe3728406e777127cabe549eadb5 265 PRINTS PR00721 Stomatin signature 174 195 2.1E-60 T 12-10-2018 IPR001972 Stomatin family GO:0016020 JDM601_0673 ab98c1c4622815f153144ae61e7538c4 307 SUPERFAMILY SSF53067 1 303 6.68E-62 T 12-10-2018 JDM601_0673 ab98c1c4622815f153144ae61e7538c4 307 ProSitePatterns PS01125 ROK family signature. 132 159 - T 12-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 JDM601_0673 ab98c1c4622815f153144ae61e7538c4 307 Gene3D G3DSA:3.30.420.40 123 287 1.4E-84 T 12-10-2018 JDM601_0673 ab98c1c4622815f153144ae61e7538c4 307 Pfam PF00480 ROK family 2 302 8.2E-61 T 12-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 JDM601_0673 ab98c1c4622815f153144ae61e7538c4 307 Gene3D G3DSA:3.30.420.40 2 300 1.4E-84 T 12-10-2018 JDM601_4087 4642afc0d63598ae9c4995db2ae68bba 137 Pfam PF04138 GtrA-like protein 18 134 9.3E-20 T 12-10-2018 IPR007267 GtrA-like protein GO:0000271|GO:0016021 JDM601_3110 c798279ed8b0ab8bf60b78b86a419606 223 Gene3D G3DSA:1.10.10.10 116 215 3.9E-30 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JDM601_3110 c798279ed8b0ab8bf60b78b86a419606 223 Gene3D G3DSA:3.40.50.2300 1 115 3.2E-32 T 12-10-2018 JDM601_3110 c798279ed8b0ab8bf60b78b86a419606 223 Pfam PF00486 Transcriptional regulatory protein, C terminal 139 210 4.5E-22 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 JDM601_3110 c798279ed8b0ab8bf60b78b86a419606 223 SUPERFAMILY SSF46894 112 210 2.83E-24 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 JDM601_3110 c798279ed8b0ab8bf60b78b86a419606 223 SMART SM00862 139 211 1.5E-20 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 JDM601_2087 10e830565fec186fff7b9716673c89a7 432 Gene3D G3DSA:3.40.190.10 23 432 2.5E-69 T 12-10-2018 JDM601_2087 10e830565fec186fff7b9716673c89a7 432 SUPERFAMILY SSF53850 27 419 1.6E-60 T 12-10-2018 JDM601_2087 10e830565fec186fff7b9716673c89a7 432 Pfam PF01547 Bacterial extracellular solute-binding protein 35 343 1.7E-36 T 12-10-2018 IPR006059 Bacterial extracellular solute-binding protein JDM601_0943 ec51cd1e0ded181a4d06f405a1c49829 220 SUPERFAMILY SSF55729 30 198 2.34E-35 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase JDM601_0943 ec51cd1e0ded181a4d06f405a1c49829 220 Pfam PF13302 Acetyltransferase (GNAT) domain 32 175 1.4E-12 T 12-10-2018 IPR000182 GNAT domain JDM601_0943 ec51cd1e0ded181a4d06f405a1c49829 220 Gene3D G3DSA:3.40.630.30 21 209 4.0E-39 T 12-10-2018 JDM601_0116 bd6dc61a923242c15b6192ec32a1a2bf 497 Gene3D G3DSA:3.50.50.60 310 490 1.0E-44 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_0116 bd6dc61a923242c15b6192ec32a1a2bf 497 PRINTS PR00370 Flavin-containing monooxygenase (FMO) signature 329 356 1.5E-6 T 12-10-2018 IPR000960 Flavin monooxygenase FMO GO:0004499|GO:0050660|GO:0050661|GO:0055114 JDM601_0116 bd6dc61a923242c15b6192ec32a1a2bf 497 PRINTS PR00370 Flavin-containing monooxygenase (FMO) signature 403 416 1.5E-6 T 12-10-2018 IPR000960 Flavin monooxygenase FMO GO:0004499|GO:0050660|GO:0050661|GO:0055114 JDM601_0116 bd6dc61a923242c15b6192ec32a1a2bf 497 PRINTS PR00370 Flavin-containing monooxygenase (FMO) signature 12 28 1.5E-6 T 12-10-2018 IPR000960 Flavin monooxygenase FMO GO:0004499|GO:0050660|GO:0050661|GO:0055114 JDM601_0116 bd6dc61a923242c15b6192ec32a1a2bf 497 PRINTS PR00370 Flavin-containing monooxygenase (FMO) signature 37 61 1.5E-6 T 12-10-2018 IPR000960 Flavin monooxygenase FMO GO:0004499|GO:0050660|GO:0050661|GO:0055114 JDM601_0116 bd6dc61a923242c15b6192ec32a1a2bf 497 SUPERFAMILY SSF51905 284 478 4.21E-26 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_0116 bd6dc61a923242c15b6192ec32a1a2bf 497 Gene3D G3DSA:3.50.50.60 3 177 2.4E-53 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_0116 bd6dc61a923242c15b6192ec32a1a2bf 497 SUPERFAMILY SSF51905 10 221 8.06E-55 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_0116 bd6dc61a923242c15b6192ec32a1a2bf 497 Pfam PF00743 Flavin-binding monooxygenase-like 14 347 7.5E-15 T 12-10-2018 IPR020946 Flavin monooxygenase-like GO:0004499|GO:0050660|GO:0050661|GO:0055114 JDM601_0049 24e741b85a010f5754e561bd50bb236f 560 PRINTS PR00723 Subtilisin serine protease family (S8) signature 441 457 3.6E-10 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related JDM601_0049 24e741b85a010f5754e561bd50bb236f 560 PRINTS PR00723 Subtilisin serine protease family (S8) signature 94 113 3.6E-10 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related JDM601_0049 24e741b85a010f5754e561bd50bb236f 560 PRINTS PR00723 Subtilisin serine protease family (S8) signature 133 146 3.6E-10 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related JDM601_0049 24e741b85a010f5754e561bd50bb236f 560 SUPERFAMILY SSF52743 73 500 1.39E-43 T 12-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 JDM601_0049 24e741b85a010f5754e561bd50bb236f 560 TIGRFAM TIGR03921 T7SS_mycosin: type VII secretion-associated serine protease mycosin 242 556 5.0E-85 T 12-10-2018 IPR023834 Type VII secretion system peptidase S8A, mycosin JDM601_0049 24e741b85a010f5754e561bd50bb236f 560 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 99 109 - T 12-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site JDM601_0049 24e741b85a010f5754e561bd50bb236f 560 SUPERFAMILY SSF101447 204 372 2.38E-5 T 12-10-2018 JDM601_0049 24e741b85a010f5754e561bd50bb236f 560 Pfam PF00082 Subtilase family 247 491 2.8E-20 T 12-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 JDM601_0081 81f42431a99cc35076add658abcaa504 167 Pfam PF01625 Peptide methionine sulfoxide reductase 7 153 2.7E-56 T 12-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 JDM601_0081 81f42431a99cc35076add658abcaa504 167 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 4 159 33.475 T 12-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 JDM601_0081 81f42431a99cc35076add658abcaa504 167 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 6 153 4.3E-50 T 12-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 JDM601_0081 81f42431a99cc35076add658abcaa504 167 Gene3D G3DSA:3.30.1060.10 1 166 9.6E-71 T 12-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 JDM601_0081 81f42431a99cc35076add658abcaa504 167 SUPERFAMILY SSF55068 2 162 6.15E-64 T 12-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 JDM601_3477 bbefaa0ed6dbf604b203b59d3bf5562e 388 Gene3D G3DSA:3.40.50.10540 5 381 3.2E-84 T 12-10-2018 IPR023606 CoA-transferase family III domain superfamily JDM601_3477 bbefaa0ed6dbf604b203b59d3bf5562e 388 Gene3D G3DSA:3.30.1540.10 224 321 3.2E-84 T 12-10-2018 JDM601_3477 bbefaa0ed6dbf604b203b59d3bf5562e 388 SUPERFAMILY SSF89796 3 387 7.33E-88 T 12-10-2018 IPR023606 CoA-transferase family III domain superfamily JDM601_3477 bbefaa0ed6dbf604b203b59d3bf5562e 388 Pfam PF02515 CoA-transferase family III 3 359 4.1E-75 T 12-10-2018 IPR003673 CoA-transferase family III GO:0003824 JDM601_1277 b72a0cdef97032479d8dd0edf6f4943e 325 Gene3D G3DSA:1.10.3720.10 89 318 3.6E-17 T 12-10-2018 IPR035906 MetI-like superfamily JDM601_1277 b72a0cdef97032479d8dd0edf6f4943e 325 SUPERFAMILY SSF161098 89 306 1.05E-16 T 12-10-2018 IPR035906 MetI-like superfamily JDM601_1277 b72a0cdef97032479d8dd0edf6f4943e 325 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 323 1.0E-35 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 JDM601_1182 d7b3e4d6eb0c2ad65084a6fcee091c4f 282 SUPERFAMILY SSF51717 4 271 1.3E-77 T 12-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 JDM601_1182 d7b3e4d6eb0c2ad65084a6fcee091c4f 282 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 8 23 - T 12-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 JDM601_1182 d7b3e4d6eb0c2ad65084a6fcee091c4f 282 Pfam PF00809 Pterin binding enzyme 9 253 4.5E-68 T 12-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 JDM601_1182 d7b3e4d6eb0c2ad65084a6fcee091c4f 282 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 42 55 - T 12-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 JDM601_1182 d7b3e4d6eb0c2ad65084a6fcee091c4f 282 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 8 267 6.7E-85 T 12-10-2018 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 JDM601_1182 d7b3e4d6eb0c2ad65084a6fcee091c4f 282 Gene3D G3DSA:3.20.20.20 1 282 6.2E-92 T 12-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 JDM601_0393 f986edc50c7f28e0a55c07df220a88b0 205 SUPERFAMILY SSF53474 6 202 7.41E-29 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_0393 f986edc50c7f28e0a55c07df220a88b0 205 Gene3D G3DSA:3.40.50.1820 4 197 1.1E-25 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_1076 573c699e43669657036e28a74229adaa 288 Gene3D G3DSA:3.40.50.1820 1 287 1.4E-54 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_1076 573c699e43669657036e28a74229adaa 288 SUPERFAMILY SSF53474 2 287 1.17E-49 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_1076 573c699e43669657036e28a74229adaa 288 PRINTS PR00412 Epoxide hydrolase signature 230 246 2.5E-20 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 JDM601_1076 573c699e43669657036e28a74229adaa 288 PRINTS PR00412 Epoxide hydrolase signature 91 104 2.5E-20 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 JDM601_1076 573c699e43669657036e28a74229adaa 288 PRINTS PR00412 Epoxide hydrolase signature 264 286 2.5E-20 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 JDM601_1076 573c699e43669657036e28a74229adaa 288 PRINTS PR00412 Epoxide hydrolase signature 45 60 2.5E-20 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 JDM601_1076 573c699e43669657036e28a74229adaa 288 PRINTS PR00412 Epoxide hydrolase signature 25 43 2.5E-20 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 JDM601_1076 573c699e43669657036e28a74229adaa 288 Pfam PF12697 Alpha/beta hydrolase family 22 281 2.5E-16 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 JDM601_3712 507c75ce795d899a175e8e37242184dd 217 Gene3D G3DSA:1.10.357.10 9 207 6.2E-30 T 12-10-2018 JDM601_3712 507c75ce795d899a175e8e37242184dd 217 Pfam PF00440 Bacterial regulatory proteins, tetR family 23 69 1.3E-10 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_3712 507c75ce795d899a175e8e37242184dd 217 SUPERFAMILY SSF46689 13 87 4.87E-16 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JDM601_1283 4d4c0df5d5f1678df4918809ed771781 129 Gene3D G3DSA:3.10.180.10 1 126 5.4E-19 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase JDM601_1283 4d4c0df5d5f1678df4918809ed771781 129 SUPERFAMILY SSF54593 3 125 1.31E-19 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase JDM601_1283 4d4c0df5d5f1678df4918809ed771781 129 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 120 2.7E-7 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain JDM601_3259 2717dde84266f4a7ae2af7242eb879bb 347 Gene3D G3DSA:3.20.20.30 1 342 5.1E-77 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 JDM601_3259 2717dde84266f4a7ae2af7242eb879bb 347 SUPERFAMILY SSF51679 1 341 4.19E-67 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 JDM601_3259 2717dde84266f4a7ae2af7242eb879bb 347 Pfam PF00296 Luciferase-like monooxygenase 3 320 4.2E-79 T 12-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 JDM601_3259 2717dde84266f4a7ae2af7242eb879bb 347 TIGRFAM TIGR03559 F420_Rv3520c: probable F420-dependent oxidoreductase, Rv3520c family 2 323 4.6E-161 T 12-10-2018 IPR019951 F420-dependent oxidoreductase-predicted, Rv3520c JDM601_3358 6bfa8fe9f4e44bcacae56261aaa1b07f 205 SUPERFAMILY SSF52499 8 203 6.28E-36 T 12-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 JDM601_3358 6bfa8fe9f4e44bcacae56261aaa1b07f 205 Pfam PF00857 Isochorismatase family 14 198 5.5E-29 T 12-10-2018 IPR000868 Isochorismatase-like GO:0003824 JDM601_3358 6bfa8fe9f4e44bcacae56261aaa1b07f 205 Gene3D G3DSA:3.40.50.850 4 205 1.8E-36 T 12-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 JDM601_2467 e50c3703351748c8e06fd955b0e27491 466 PIRSF PIRSF006809 10 42 460.0 T 12-10-2018 IPR016496 GTPase HflX GO:0005525 JDM601_2467 e50c3703351748c8e06fd955b0e27491 466 PIRSF PIRSF006809 36 466 1.7E-163 T 12-10-2018 IPR016496 GTPase HflX GO:0005525 JDM601_2467 e50c3703351748c8e06fd955b0e27491 466 Pfam PF01926 50S ribosome-binding GTPase 245 367 1.0E-20 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 JDM601_2467 e50c3703351748c8e06fd955b0e27491 466 Gene3D G3DSA:3.40.50.300 242 413 2.4E-38 T 12-10-2018 JDM601_2467 e50c3703351748c8e06fd955b0e27491 466 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 245 265 2.1E-8 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 JDM601_2467 e50c3703351748c8e06fd955b0e27491 466 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 312 330 2.1E-8 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 JDM601_2467 e50c3703351748c8e06fd955b0e27491 466 Hamap MF_00900 GTPase HflX [hflX]. 64 437 48.691 T 12-10-2018 IPR016496 GTPase HflX GO:0005525 JDM601_2467 e50c3703351748c8e06fd955b0e27491 466 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 45 406 3.5E-130 T 12-10-2018 IPR016496 GTPase HflX GO:0005525 JDM601_2467 e50c3703351748c8e06fd955b0e27491 466 Gene3D G3DSA:3.40.50.11060 54 176 9.0E-40 T 12-10-2018 JDM601_2467 e50c3703351748c8e06fd955b0e27491 466 Pfam PF13167 GTP-binding GTPase N-terminal 62 149 5.3E-32 T 12-10-2018 IPR025121 GTPase HflX, N-terminal JDM601_2467 e50c3703351748c8e06fd955b0e27491 466 SUPERFAMILY SSF52540 242 410 1.74E-38 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_2467 e50c3703351748c8e06fd955b0e27491 466 Pfam PF16360 GTP-binding GTPase Middle Region 151 237 2.4E-29 T 12-10-2018 IPR032305 GTP-binding protein, middle domain JDM601_3399 26fe477051b3fb2bff13d44a0a899c19 259 SUPERFAMILY SSF52096 3 259 2.49E-70 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily JDM601_3399 26fe477051b3fb2bff13d44a0a899c19 259 Pfam PF00378 Enoyl-CoA hydratase/isomerase 8 258 8.1E-47 T 12-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 JDM601_3399 26fe477051b3fb2bff13d44a0a899c19 259 Gene3D G3DSA:1.10.12.10 202 259 8.0E-17 T 12-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal JDM601_3399 26fe477051b3fb2bff13d44a0a899c19 259 Gene3D G3DSA:3.90.226.10 2 199 2.4E-56 T 12-10-2018 JDM601_1070 f299961f5fefd0c70f63f59ac772b128 107 Pfam PF03992 Antibiotic biosynthesis monooxygenase 2 76 6.5E-18 T 12-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain JDM601_1070 f299961f5fefd0c70f63f59ac772b128 107 SUPERFAMILY SSF54909 2 94 5.37E-26 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel JDM601_1070 f299961f5fefd0c70f63f59ac772b128 107 Gene3D G3DSA:3.30.70.100 1 94 1.4E-20 T 12-10-2018 JDM601_0987 31465e2f18a213f9c123e8c9c225a6c3 244 SUPERFAMILY SSF53955 72 242 6.47E-33 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily JDM601_0987 31465e2f18a213f9c123e8c9c225a6c3 244 Pfam PF13406 Transglycosylase SLT domain 161 202 1.2E-7 T 12-10-2018 IPR031304 Transglycosylase SLT domain 2 JDM601_3343 188176d550ef700a3a87938b04d1dbf0 446 TIGRFAM TIGR03970 Rv0697: dehydrogenase, Rv0697 family 1 439 3.3E-163 T 12-10-2018 IPR023978 Glucose-methanol-choline oxidoreductase, actinobacteria JDM601_3343 188176d550ef700a3a87938b04d1dbf0 446 SUPERFAMILY SSF51905 30 442 2.48E-42 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_3343 188176d550ef700a3a87938b04d1dbf0 446 Pfam PF00732 GMC oxidoreductase 43 263 5.4E-38 T 12-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 JDM601_3343 188176d550ef700a3a87938b04d1dbf0 446 SUPERFAMILY SSF54373 290 364 1.31E-12 T 12-10-2018 JDM601_3343 188176d550ef700a3a87938b04d1dbf0 446 Pfam PF05199 GMC oxidoreductase 319 435 1.3E-26 T 12-10-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 JDM601_3343 188176d550ef700a3a87938b04d1dbf0 446 Gene3D G3DSA:3.50.50.60 1 436 2.2E-88 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_3343 188176d550ef700a3a87938b04d1dbf0 446 Gene3D G3DSA:3.30.410.40 115 377 2.2E-88 T 12-10-2018 JDM601_3343 188176d550ef700a3a87938b04d1dbf0 446 PIRSF PIRSF000137 364 446 3.0E-15 T 12-10-2018 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 JDM601_3343 188176d550ef700a3a87938b04d1dbf0 446 PIRSF PIRSF000137 1 285 1.4E-32 T 12-10-2018 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 JDM601_3343 188176d550ef700a3a87938b04d1dbf0 446 PIRSF PIRSF000137 307 366 2.3E-7 T 12-10-2018 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 JDM601_2280 e983ec19b4cb84c18f6176a42880b690 359 TIGRFAM TIGR01826 CofD_related: conserved hypothetical protein 12 317 2.0E-101 T 12-10-2018 IPR010119 Gluconeogenesis factor JDM601_2280 e983ec19b4cb84c18f6176a42880b690 359 Hamap MF_00973 Gluconeogenesis factor. 8 320 32.635 T 12-10-2018 IPR010119 Gluconeogenesis factor JDM601_2280 e983ec19b4cb84c18f6176a42880b690 359 Pfam PF01933 Uncharacterised protein family UPF0052 12 287 1.1E-70 T 12-10-2018 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 JDM601_2280 e983ec19b4cb84c18f6176a42880b690 359 SUPERFAMILY SSF142338 9 315 2.49E-85 T 12-10-2018 JDM601_2280 e983ec19b4cb84c18f6176a42880b690 359 Gene3D G3DSA:3.40.50.12300 8 320 4.9E-94 T 12-10-2018 IPR038136 Gluconeogenesis factor superfamily JDM601_1902 9194799a01a592401ca3d190f1a86d57 99 Gene3D G3DSA:1.10.287.850 1 98 4.2E-33 T 12-10-2018 JDM601_1902 9194799a01a592401ca3d190f1a86d57 99 Pfam PF00934 PE family 1 93 3.3E-34 T 12-10-2018 IPR000084 PE-PGRS family, N-terminal JDM601_1902 9194799a01a592401ca3d190f1a86d57 99 SUPERFAMILY SSF140459 8 84 2.04E-24 T 12-10-2018 JDM601_2740 42c203db1c50cdac81d47f7748f3fee2 194 Gene3D G3DSA:3.40.1000.70 24 190 1.7E-5 T 12-10-2018 IPR038232 PknH-like extracellular domain superfamily KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1 JDM601_2740 42c203db1c50cdac81d47f7748f3fee2 194 Pfam PF14032 PknH-like extracellular domain 27 178 3.8E-13 T 12-10-2018 IPR026954 PknH-like extracellular domain KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1 JDM601_4007 a8fd21a8a56273bba9d1956eadf4f8f7 435 PIRSF PIRSF003085 12 435 2.7E-122 T 12-10-2018 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 JDM601_4007 a8fd21a8a56273bba9d1956eadf4f8f7 435 SMART SM00828 Methyltransferase in polyketide synthase (PKS) enzymes. 163 415 0.0045 T 12-10-2018 IPR020803 Polyketide synthase, methyltransferase domain JDM601_4007 a8fd21a8a56273bba9d1956eadf4f8f7 435 Gene3D G3DSA:3.40.50.150 153 420 1.1E-86 T 12-10-2018 JDM601_4007 a8fd21a8a56273bba9d1956eadf4f8f7 435 Pfam PF02353 Mycolic acid cyclopropane synthetase 144 412 5.0E-97 T 12-10-2018 JDM601_4007 a8fd21a8a56273bba9d1956eadf4f8f7 435 SUPERFAMILY SSF53335 154 417 6.23E-68 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JDM601_3559 5b1ec4e4294808ddbc0150079d584f70 384 Pfam PF17198 Spirocyclase AveC-like 99 332 3.8E-100 T 12-10-2018 IPR033459 Spirocyclase AveC-like JDM601_2822 c41eb087f39919709d1a890f4d252b81 503 Pfam PF01609 Transposase DDE domain 169 444 3.9E-10 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 JDM601_4152 901fcde0f440f9ede3bbe3785b9048f0 253 Pfam PF06912 Protein of unknown function (DUF1275) 32 240 4.0E-27 T 12-10-2018 IPR010699 Protein of unknown function DUF1275 JDM601_3003 77c878003588c87936449b32fbe429cf 313 Gene3D G3DSA:1.20.1510.10 6 217 6.9E-33 T 12-10-2018 IPR027469 Cation efflux transmembrane domain superfamily JDM601_3003 77c878003588c87936449b32fbe429cf 313 SUPERFAMILY SSF161111 5 219 2.22E-37 T 12-10-2018 IPR027469 Cation efflux transmembrane domain superfamily JDM601_3003 77c878003588c87936449b32fbe429cf 313 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 7 286 4.7E-40 T 12-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 JDM601_3003 77c878003588c87936449b32fbe429cf 313 Pfam PF01545 Cation efflux family 11 215 4.2E-33 T 12-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 JDM601_3003 77c878003588c87936449b32fbe429cf 313 SUPERFAMILY SSF160240 228 294 1.7E-5 T 12-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 JDM601_3471 5b29bac5c9598af9777fb989ee6320f1 364 TIGRFAM TIGR00996 Mtu_fam_mce: virulence factor Mce family protein 12 292 1.3E-59 T 12-10-2018 IPR005693 Virulence factor Mce protein JDM601_3471 5b29bac5c9598af9777fb989ee6320f1 364 PRINTS PR01782 Mycobacterial cell entry (MCE) protein signature 298 317 1.5E-10 T 12-10-2018 IPR005693 Virulence factor Mce protein JDM601_3471 5b29bac5c9598af9777fb989ee6320f1 364 PRINTS PR01782 Mycobacterial cell entry (MCE) protein signature 178 196 1.5E-10 T 12-10-2018 IPR005693 Virulence factor Mce protein JDM601_3471 5b29bac5c9598af9777fb989ee6320f1 364 PRINTS PR01782 Mycobacterial cell entry (MCE) protein signature 91 107 1.5E-10 T 12-10-2018 IPR005693 Virulence factor Mce protein JDM601_3471 5b29bac5c9598af9777fb989ee6320f1 364 PRINTS PR01782 Mycobacterial cell entry (MCE) protein signature 129 153 1.5E-10 T 12-10-2018 IPR005693 Virulence factor Mce protein JDM601_3471 5b29bac5c9598af9777fb989ee6320f1 364 Pfam PF02470 MlaD protein 40 113 1.1E-15 T 12-10-2018 IPR003399 Mce/MlaD JDM601_3471 5b29bac5c9598af9777fb989ee6320f1 364 Pfam PF11887 Cholesterol uptake porter CUP1 of Mce4, putative 151 307 1.7E-7 T 12-10-2018 IPR024516 Mammalian cell entry, C-terminal JDM601_1129 edf31e7161eadd626f65a3e56391ff88 211 Gene3D G3DSA:1.10.357.10 5 210 1.3E-38 T 12-10-2018 JDM601_1129 edf31e7161eadd626f65a3e56391ff88 211 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 23 36 9.2E-11 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_1129 edf31e7161eadd626f65a3e56391ff88 211 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 44 67 9.2E-11 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_1129 edf31e7161eadd626f65a3e56391ff88 211 SUPERFAMILY SSF46689 9 82 1.15E-17 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JDM601_1129 edf31e7161eadd626f65a3e56391ff88 211 Pfam PF00440 Bacterial regulatory proteins, tetR family 23 69 1.3E-15 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_3844 5a23555a7250af4ed327393b4a394b08 698 Gene3D G3DSA:1.20.140.10 162 321 1.2E-20 T 12-10-2018 JDM601_3844 5a23555a7250af4ed327393b4a394b08 698 Gene3D G3DSA:2.40.110.10 432 543 1.3E-34 T 12-10-2018 JDM601_3844 5a23555a7250af4ed327393b4a394b08 698 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 324 429 2.2E-19 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 JDM601_3844 5a23555a7250af4ed327393b4a394b08 698 Gene3D G3DSA:1.10.540.10 322 430 1.7E-22 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 JDM601_3844 5a23555a7250af4ed327393b4a394b08 698 SUPERFAMILY SSF47203 166 307 1.13E-22 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 JDM601_3844 5a23555a7250af4ed327393b4a394b08 698 Gene3D G3DSA:1.20.140.10 544 698 3.5E-20 T 12-10-2018 JDM601_3844 5a23555a7250af4ed327393b4a394b08 698 SUPERFAMILY SSF47203 539 694 9.34E-9 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 JDM601_3844 5a23555a7250af4ed327393b4a394b08 698 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 433 527 6.1E-19 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 JDM601_3844 5a23555a7250af4ed327393b4a394b08 698 SUPERFAMILY SSF56645 320 551 3.53E-61 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 JDM601_3844 5a23555a7250af4ed327393b4a394b08 698 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 167 288 4.9E-13 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 JDM601_3844 5a23555a7250af4ed327393b4a394b08 698 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 539 694 1.8E-12 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 JDM601_0251 2653dbf7d254fb10589f199510ec67da 1204 Pfam PF05378 Hydantoinase/oxoprolinase N-terminal region 7 185 6.5E-59 T 12-10-2018 IPR008040 Hydantoinaseoxoprolinase, N-terminal Reactome: R-HSA-174403|Reactome: R-HSA-5578998 JDM601_0251 2653dbf7d254fb10589f199510ec67da 1204 Pfam PF01968 Hydantoinase/oxoprolinase 205 498 2.5E-113 T 12-10-2018 IPR002821 Hydantoinase A/oxoprolinase GO:0016787 Reactome: R-HSA-174403|Reactome: R-HSA-5578998 JDM601_0251 2653dbf7d254fb10589f199510ec67da 1204 Pfam PF02538 Hydantoinase B/oxoprolinase 693 1203 5.9E-197 T 12-10-2018 IPR003692 Hydantoinase B/oxoprolinase GO:0003824 Reactome: R-HSA-174403|Reactome: R-HSA-5578998 JDM601_4149 79336d4104a562818eca3123d3ee3bf7 272 SUPERFAMILY SSF50475 34 265 7.45E-23 T 12-10-2018 JDM601_4149 79336d4104a562818eca3123d3ee3bf7 272 Gene3D G3DSA:3.20.180.10 172 260 3.5E-11 T 12-10-2018 IPR037119 Haem oxygenase HugZ-like superfamily JDM601_4149 79336d4104a562818eca3123d3ee3bf7 272 Pfam PF10615 Protein of unknown function (DUF2470) 183 248 5.2E-6 T 12-10-2018 IPR019595 Domain of unknown function DUF2470 JDM601_0442 5b65dcaffcb90a8c23d1bf18a69f54b9 211 Gene3D G3DSA:3.40.50.360 14 203 5.4E-16 T 12-10-2018 IPR029039 Flavoprotein-like superfamily JDM601_0442 5b65dcaffcb90a8c23d1bf18a69f54b9 211 Pfam PF03358 NADPH-dependent FMN reductase 23 161 4.2E-17 T 12-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 JDM601_0442 5b65dcaffcb90a8c23d1bf18a69f54b9 211 SUPERFAMILY SSF52218 11 201 6.2E-22 T 12-10-2018 IPR029039 Flavoprotein-like superfamily JDM601_2878 72c903f441b65f9692219f66343c7950 200 Gene3D G3DSA:1.10.357.10 65 200 1.2E-19 T 12-10-2018 JDM601_2878 72c903f441b65f9692219f66343c7950 200 Pfam PF16859 Bacterial transcriptional repressor C-terminal 86 192 3.9E-17 T 12-10-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal JDM601_2878 72c903f441b65f9692219f66343c7950 200 Pfam PF00440 Bacterial regulatory proteins, tetR family 26 72 5.8E-16 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_2878 72c903f441b65f9692219f66343c7950 200 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 26 39 7.6E-9 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_2878 72c903f441b65f9692219f66343c7950 200 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 47 70 7.6E-9 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_2878 72c903f441b65f9692219f66343c7950 200 Gene3D G3DSA:1.10.10.60 12 64 9.0E-20 T 12-10-2018 JDM601_2878 72c903f441b65f9692219f66343c7950 200 SUPERFAMILY SSF48498 85 198 7.53E-20 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily JDM601_2878 72c903f441b65f9692219f66343c7950 200 SUPERFAMILY SSF46689 16 75 8.48E-15 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JDM601_4006 74b292647e06402226fa4055f6d4466e 449 SUPERFAMILY SSF56176 24 156 4.39E-25 T 12-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 JDM601_4006 74b292647e06402226fa4055f6d4466e 449 Gene3D G3DSA:3.30.465.10 37 160 3.0E-32 T 12-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 JDM601_4006 74b292647e06402226fa4055f6d4466e 449 SUPERFAMILY SSF55103 135 438 1.48E-11 T 12-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 JDM601_4006 74b292647e06402226fa4055f6d4466e 449 Pfam PF01565 FAD binding domain 25 128 2.3E-10 T 12-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 JDM601_2545 f63eb6b4e1e7b136916471a07d19fecb 146 Pfam PF10604 Polyketide cyclase / dehydrase and lipid transport 1 141 2.5E-17 T 12-10-2018 IPR019587 Polyketide cyclase/dehydrase JDM601_2545 f63eb6b4e1e7b136916471a07d19fecb 146 SUPERFAMILY SSF55961 1 142 3.46E-20 T 12-10-2018 JDM601_2545 f63eb6b4e1e7b136916471a07d19fecb 146 Gene3D G3DSA:3.30.530.20 1 143 2.5E-14 T 12-10-2018 IPR023393 START-like domain superfamily JDM601_4022 8af8a7386ad3b3c4646c4d1dbe1ee613 351 Gene3D G3DSA:3.90.920.30 25 309 8.8E-85 T 12-10-2018 JDM601_0103 865200d3acfef2b575f36f5491cec492 173 SUPERFAMILY SSF46689 5 73 4.05E-16 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JDM601_0103 865200d3acfef2b575f36f5491cec492 173 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 2.5E-9 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_0103 865200d3acfef2b575f36f5491cec492 173 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 2.5E-9 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_0103 865200d3acfef2b575f36f5491cec492 173 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 57 2.1E-14 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_0103 865200d3acfef2b575f36f5491cec492 173 Gene3D G3DSA:1.10.357.10 4 171 2.1E-21 T 12-10-2018 JDM601_2316 8781558146feea79e11c8f0eb694fa42 193 Pfam PF00156 Phosphoribosyl transferase domain 44 163 1.4E-17 T 12-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 JDM601_2316 8781558146feea79e11c8f0eb694fa42 193 SUPERFAMILY SSF53271 13 187 3.45E-38 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like JDM601_2316 8781558146feea79e11c8f0eb694fa42 193 Gene3D G3DSA:3.40.50.2020 1 193 1.4E-61 T 12-10-2018 JDM601_2316 8781558146feea79e11c8f0eb694fa42 193 Hamap MF_01219 Bifunctional protein PyrR [pyrR]. 10 193 35.117 T 12-10-2018 IPR023050 Bifunctional protein PyrR KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 JDM601_4131 236114a65600471244f8dd30e458a434 264 SUPERFAMILY SSF69593 18 204 1.96E-32 T 12-10-2018 JDM601_4131 236114a65600471244f8dd30e458a434 264 Pfam PF01553 Acyltransferase 24 149 4.6E-30 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 JDM601_4131 236114a65600471244f8dd30e458a434 264 SMART SM00563 38 152 6.0E-31 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 JDM601_0777 c1577d7f88ddf2adf01c012e074624fe 110 Gene3D G3DSA:1.20.20.20 23 109 5.0E-28 T 12-10-2018 IPR038378 Haemophore, haem-binding domain superfamily JDM601_0777 c1577d7f88ddf2adf01c012e074624fe 110 Pfam PF16525 Haemophore, haem-binding 27 102 8.2E-31 T 12-10-2018 IPR032407 Haemophore, haem-binding GO:0020037 JDM601_0777 c1577d7f88ddf2adf01c012e074624fe 110 TIGRFAM TIGR04529 MTB_hemophore: hemophore-related protein, Rv0203/Rv1174c family 28 103 5.8E-26 T 12-10-2018 IPR032407 Haemophore, haem-binding GO:0020037 JDM601_0337 5e5bb7ca18fe8d53757c3f7a4eca1d70 396 PRINTS PR00359 B-class P450 signature 280 307 1.5E-44 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_0337 5e5bb7ca18fe8d53757c3f7a4eca1d70 396 PRINTS PR00359 B-class P450 signature 263 274 1.5E-44 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_0337 5e5bb7ca18fe8d53757c3f7a4eca1d70 396 PRINTS PR00359 B-class P450 signature 80 91 1.5E-44 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_0337 5e5bb7ca18fe8d53757c3f7a4eca1d70 396 PRINTS PR00359 B-class P450 signature 143 158 1.5E-44 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_0337 5e5bb7ca18fe8d53757c3f7a4eca1d70 396 PRINTS PR00359 B-class P450 signature 330 339 1.5E-44 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_0337 5e5bb7ca18fe8d53757c3f7a4eca1d70 396 PRINTS PR00359 B-class P450 signature 126 142 1.5E-44 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_0337 5e5bb7ca18fe8d53757c3f7a4eca1d70 396 PRINTS PR00359 B-class P450 signature 339 350 1.5E-44 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_0337 5e5bb7ca18fe8d53757c3f7a4eca1d70 396 PRINTS PR00359 B-class P450 signature 186 208 1.5E-44 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_0337 5e5bb7ca18fe8d53757c3f7a4eca1d70 396 PRINTS PR00359 B-class P450 signature 308 323 1.5E-44 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_0337 5e5bb7ca18fe8d53757c3f7a4eca1d70 396 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 332 341 - T 12-10-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 JDM601_0337 5e5bb7ca18fe8d53757c3f7a4eca1d70 396 PRINTS PR00385 P450 superfamily signature 228 245 3.8E-6 T 12-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_0337 5e5bb7ca18fe8d53757c3f7a4eca1d70 396 PRINTS PR00385 P450 superfamily signature 263 274 3.8E-6 T 12-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_0337 5e5bb7ca18fe8d53757c3f7a4eca1d70 396 PRINTS PR00385 P450 superfamily signature 339 350 3.8E-6 T 12-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_0337 5e5bb7ca18fe8d53757c3f7a4eca1d70 396 PRINTS PR00385 P450 superfamily signature 330 339 3.8E-6 T 12-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_0337 5e5bb7ca18fe8d53757c3f7a4eca1d70 396 Pfam PF00067 Cytochrome P450 209 360 1.4E-22 T 12-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_0337 5e5bb7ca18fe8d53757c3f7a4eca1d70 396 Gene3D G3DSA:1.10.630.10 1 394 1.5E-108 T 12-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_0337 5e5bb7ca18fe8d53757c3f7a4eca1d70 396 SUPERFAMILY SSF48264 23 372 2.36E-84 T 12-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_3867 611ce2ba0f8f99adf6549c01395c493d 306 Gene3D G3DSA:3.60.15.10 3 276 2.0E-19 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like JDM601_3867 611ce2ba0f8f99adf6549c01395c493d 306 SUPERFAMILY SSF56281 29 268 1.05E-17 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like JDM601_2803 ff79226515163babf926274c81923f94 422 PRINTS PR00359 B-class P450 signature 288 299 1.1E-42 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_2803 ff79226515163babf926274c81923f94 422 PRINTS PR00359 B-class P450 signature 105 116 1.1E-42 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_2803 ff79226515163babf926274c81923f94 422 PRINTS PR00359 B-class P450 signature 364 375 1.1E-42 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_2803 ff79226515163babf926274c81923f94 422 PRINTS PR00359 B-class P450 signature 209 231 1.1E-42 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_2803 ff79226515163babf926274c81923f94 422 PRINTS PR00359 B-class P450 signature 333 348 1.1E-42 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_2803 ff79226515163babf926274c81923f94 422 PRINTS PR00359 B-class P450 signature 168 183 1.1E-42 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_2803 ff79226515163babf926274c81923f94 422 PRINTS PR00359 B-class P450 signature 305 332 1.1E-42 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_2803 ff79226515163babf926274c81923f94 422 PRINTS PR00359 B-class P450 signature 151 167 1.1E-42 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_2803 ff79226515163babf926274c81923f94 422 Gene3D G3DSA:1.10.630.10 3 420 2.9E-124 T 12-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_2803 ff79226515163babf926274c81923f94 422 SUPERFAMILY SSF48264 23 410 4.85E-81 T 12-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_2803 ff79226515163babf926274c81923f94 422 Pfam PF00067 Cytochrome P450 289 380 6.5E-16 T 12-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_3355 6860083e9475c45403d7acd0c414f8e7 370 SUPERFAMILY SSF53474 130 353 1.02E-16 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_3355 6860083e9475c45403d7acd0c414f8e7 370 Gene3D G3DSA:3.40.50.1820 86 366 3.8E-15 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_0564 e7586ecb144a8346390a7873656de059 262 SUPERFAMILY SSF53335 23 232 2.6E-25 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JDM601_0564 e7586ecb144a8346390a7873656de059 262 Pfam PF08241 Methyltransferase domain 51 144 3.1E-10 T 12-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 JDM601_0564 e7586ecb144a8346390a7873656de059 262 Gene3D G3DSA:3.40.50.150 33 209 2.3E-23 T 12-10-2018 JDM601_3427 6900f4452361f37b75889177c617e51c 198 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 24 47 1.3E-5 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_3427 6900f4452361f37b75889177c617e51c 198 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 3 16 1.3E-5 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_3427 6900f4452361f37b75889177c617e51c 198 Pfam PF00440 Bacterial regulatory proteins, tetR family 3 49 1.5E-10 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_3427 6900f4452361f37b75889177c617e51c 198 Gene3D G3DSA:1.10.357.10 2 187 7.8E-18 T 12-10-2018 JDM601_3427 6900f4452361f37b75889177c617e51c 198 SUPERFAMILY SSF46689 3 72 4.1E-13 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JDM601_3851 94147fd1c15617195a7258daec29cb3d 158 Pfam PF07729 FCD domain 9 138 1.2E-21 T 12-10-2018 IPR011711 GntR, C-terminal JDM601_3851 94147fd1c15617195a7258daec29cb3d 158 SUPERFAMILY SSF48008 7 145 6.54E-22 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal JDM601_3851 94147fd1c15617195a7258daec29cb3d 158 SMART SM00895 9 139 2.1E-20 T 12-10-2018 IPR011711 GntR, C-terminal JDM601_3851 94147fd1c15617195a7258daec29cb3d 158 Gene3D G3DSA:1.20.120.530 1 153 6.6E-26 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal JDM601_3914 cac1bfa9e63853ffc42928b0f28a9d68 145 Gene3D G3DSA:2.30.110.10 23 121 3.3E-5 T 12-10-2018 IPR012349 FMN-binding split barrel GO:0048037 JDM601_2123 c152af6227dd7704e7f6e9a9696105f7 435 Gene3D G3DSA:3.30.70.1230 231 418 2.5E-72 T 12-10-2018 IPR029787 Nucleotide cyclase JDM601_2123 c152af6227dd7704e7f6e9a9696105f7 435 SMART SM00044 207 405 5.3E-72 T 12-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 JDM601_2123 c152af6227dd7704e7f6e9a9696105f7 435 ProSitePatterns PS00452 Guanylate cyclase signature. 348 371 - T 12-10-2018 IPR018297 Adenylyl cyclase class-4/guanylyl cyclase, conserved site GO:0009190|GO:0016849|GO:0035556 JDM601_2123 c152af6227dd7704e7f6e9a9696105f7 435 SUPERFAMILY SSF55073 235 415 1.13E-60 T 12-10-2018 IPR029787 Nucleotide cyclase JDM601_2123 c152af6227dd7704e7f6e9a9696105f7 435 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 237 415 3.0E-58 T 12-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 JDM601_3320 26f6a97451585546f5b353384dd51b20 187 SUPERFAMILY SSF55282 10 185 1.55E-72 T 12-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JDM601_3320 26f6a97451585546f5b353384dd51b20 187 Pfam PF00673 ribosomal L5P family C-terminus 91 184 6.6E-38 T 12-10-2018 IPR031309 Ribosomal protein L5, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JDM601_3320 26f6a97451585546f5b353384dd51b20 187 Gene3D G3DSA:3.30.1440.10 6 186 9.6E-76 T 12-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JDM601_3320 26f6a97451585546f5b353384dd51b20 187 PIRSF PIRSF002161 4 187 9.0E-63 T 12-10-2018 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JDM601_3320 26f6a97451585546f5b353384dd51b20 187 Pfam PF00281 Ribosomal protein L5 31 87 1.2E-24 T 12-10-2018 IPR031310 Ribosomal protein L5, N-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JDM601_3320 26f6a97451585546f5b353384dd51b20 187 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 8 186 41.943 T 12-10-2018 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 JDM601_2062 ed3ab69ee238f440e7fc82e443e6d56b 691 Pfam PF09299 Mu transposase, C-terminal 501 563 2.2E-6 T 12-10-2018 IPR015378 Transposase-like, Mu, C-terminal JDM601_2062 ed3ab69ee238f440e7fc82e443e6d56b 691 Pfam PF00665 Integrase core domain 256 409 1.5E-11 T 12-10-2018 IPR001584 Integrase, catalytic core GO:0015074 JDM601_2062 ed3ab69ee238f440e7fc82e443e6d56b 691 SUPERFAMILY SSF53098 254 470 2.53E-13 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily JDM601_0041 45c57620452655fbb7698fdab51ed3d0 435 Pfam PF10774 Domain of unknown function (DUF4226) 53 161 3.4E-37 T 12-10-2018 IPR019710 Protein of unknown function DUF4226 JDM601_2507 446775630c21c90100e3d53ec8fbd558 252 Pfam PF07681 DoxX 6 92 4.5E-11 T 12-10-2018 IPR032808 DoxX family JDM601_1496 1a832cd799fb813ad135723c09554463 403 Hamap MF_01812 N-acetyltransferase Eis [eis]. 9 403 33.511 T 12-10-2018 IPR022902 N-acetyltransferase Eis JDM601_1496 1a832cd799fb813ad135723c09554463 403 Gene3D G3DSA:3.30.1050.10 297 394 1.5E-24 T 12-10-2018 IPR036527 SCP2 sterol-binding domain superfamily JDM601_1496 1a832cd799fb813ad135723c09554463 403 Pfam PF13530 Sterol carrier protein domain 185 394 1.3E-44 T 12-10-2018 IPR025559 Enhanced intracellular survival protein domain JDM601_1496 1a832cd799fb813ad135723c09554463 403 SUPERFAMILY SSF55718 299 402 2.75E-20 T 12-10-2018 IPR036527 SCP2 sterol-binding domain superfamily JDM601_1496 1a832cd799fb813ad135723c09554463 403 Pfam PF13527 Acetyltransferase (GNAT) domain 12 136 2.8E-26 T 12-10-2018 JDM601_1496 1a832cd799fb813ad135723c09554463 403 Gene3D G3DSA:3.40.630.30 140 291 1.1E-44 T 12-10-2018 JDM601_1496 1a832cd799fb813ad135723c09554463 403 Gene3D G3DSA:3.40.630.30 6 139 1.1E-38 T 12-10-2018 JDM601_1496 1a832cd799fb813ad135723c09554463 403 SUPERFAMILY SSF55729 9 296 1.18E-53 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase JDM601_1031 6799be9e3c640e381195bf7ed022ebe6 127 SUPERFAMILY SSF54427 6 125 3.18E-26 T 12-10-2018 IPR032710 NTF2-like domain superfamily JDM601_1031 6799be9e3c640e381195bf7ed022ebe6 127 Gene3D G3DSA:3.10.450.50 6 127 1.8E-36 T 12-10-2018 JDM601_1031 6799be9e3c640e381195bf7ed022ebe6 127 Pfam PF12680 SnoaL-like domain 15 113 3.7E-12 T 12-10-2018 IPR037401 SnoaL-like domain JDM601_3784 77b6486511bfaceafa7879dfdb818eee 511 Pfam PF00501 AMP-binding enzyme 7 407 2.6E-71 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 JDM601_3784 77b6486511bfaceafa7879dfdb818eee 511 Gene3D G3DSA:3.40.50.12780 2 399 7.1E-92 T 12-10-2018 JDM601_3784 77b6486511bfaceafa7879dfdb818eee 511 SUPERFAMILY SSF56801 9 507 6.8E-119 T 12-10-2018 JDM601_3784 77b6486511bfaceafa7879dfdb818eee 511 Gene3D G3DSA:3.30.300.310 403 509 1.8E-26 T 12-10-2018 JDM601_3784 77b6486511bfaceafa7879dfdb818eee 511 ProSitePatterns PS00455 Putative AMP-binding domain signature. 157 168 - T 12-10-2018 IPR020845 AMP-binding, conserved site JDM601_3784 77b6486511bfaceafa7879dfdb818eee 511 Pfam PF13193 AMP-binding enzyme C-terminal domain 416 494 2.2E-14 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain JDM601_1141 d2c8391da9d3a403d7a66971efa7c297 57 Pfam PF17227 Family of unknown function (DUF5302) 7 57 9.9E-20 T 12-10-2018 IPR035172 Protein of unknown function DUF5302 JDM601_2046 aac25ae079bae078d444b8a309cf2e4b 141 Gene3D G3DSA:3.10.450.50 5 130 4.6E-30 T 12-10-2018 JDM601_2046 aac25ae079bae078d444b8a309cf2e4b 141 SUPERFAMILY SSF54427 3 116 1.29E-16 T 12-10-2018 IPR032710 NTF2-like domain superfamily JDM601_2046 aac25ae079bae078d444b8a309cf2e4b 141 Pfam PF12680 SnoaL-like domain 11 108 1.1E-9 T 12-10-2018 IPR037401 SnoaL-like domain JDM601_0105 c2ee5939be082b157c1246ed436f39cf 274 Pfam PF13622 Thioesterase-like superfamily 32 271 1.8E-33 T 12-10-2018 JDM601_0105 c2ee5939be082b157c1246ed436f39cf 274 Gene3D G3DSA:3.10.129.90 27 272 1.8E-14 T 12-10-2018 JDM601_0105 c2ee5939be082b157c1246ed436f39cf 274 SUPERFAMILY SSF54637 145 272 3.22E-14 T 12-10-2018 IPR029069 HotDog domain superfamily JDM601_1270 b13798fb71b88ffe8abc24c26e6a3468 144 Pfam PF01850 PIN domain 8 125 1.4E-8 T 12-10-2018 IPR002716 PIN domain JDM601_1270 b13798fb71b88ffe8abc24c26e6a3468 144 Hamap MF_00265 tRNA(fMet)-specific endonuclease VapC [vapC]. 8 136 12.303 T 12-10-2018 IPR022907 VapC family GO:0004540 JDM601_1270 b13798fb71b88ffe8abc24c26e6a3468 144 Gene3D G3DSA:3.40.50.1010 7 129 7.4E-6 T 12-10-2018 JDM601_1270 b13798fb71b88ffe8abc24c26e6a3468 144 SUPERFAMILY SSF88723 8 135 5.05E-10 T 12-10-2018 IPR029060 PIN-like domain superfamily JDM601_2200 62c2c4786b285c0c00d96a77be4c2626 270 Gene3D G3DSA:3.40.50.150 31 262 9.3E-38 T 12-10-2018 JDM601_2200 62c2c4786b285c0c00d96a77be4c2626 270 Pfam PF08241 Methyltransferase domain 90 184 6.4E-23 T 12-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 JDM601_2200 62c2c4786b285c0c00d96a77be4c2626 270 SUPERFAMILY SSF53335 41 219 8.89E-37 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JDM601_0099 33c8d04521d1bd5c688dc384ca9a9db6 212 SUPERFAMILY SSF46689 9 78 1.4E-16 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JDM601_0099 33c8d04521d1bd5c688dc384ca9a9db6 212 SUPERFAMILY SSF48498 83 202 1.25E-19 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily JDM601_0099 33c8d04521d1bd5c688dc384ca9a9db6 212 Gene3D G3DSA:1.10.10.60 1 54 2.6E-18 T 12-10-2018 JDM601_0099 33c8d04521d1bd5c688dc384ca9a9db6 212 Gene3D G3DSA:1.10.357.10 56 199 3.8E-25 T 12-10-2018 JDM601_0099 33c8d04521d1bd5c688dc384ca9a9db6 212 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 18 31 2.8E-8 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_0099 33c8d04521d1bd5c688dc384ca9a9db6 212 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 39 62 2.8E-8 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_0099 33c8d04521d1bd5c688dc384ca9a9db6 212 Pfam PF00440 Bacterial regulatory proteins, tetR family 18 58 1.1E-12 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_2304 3fae46a4596ffd2b400f6ccb14a09ee0 452 PRINTS PR00757 Flavin-containing amine oxidase signature 427 444 2.8E-5 T 12-10-2018 IPR001613 Flavin amine oxidase GO:0016491|GO:0055114 JDM601_2304 3fae46a4596ffd2b400f6ccb14a09ee0 452 PRINTS PR00757 Flavin-containing amine oxidase signature 5 24 2.8E-5 T 12-10-2018 IPR001613 Flavin amine oxidase GO:0016491|GO:0055114 JDM601_2304 3fae46a4596ffd2b400f6ccb14a09ee0 452 SUPERFAMILY SSF51905 1 447 6.73E-52 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_2304 3fae46a4596ffd2b400f6ccb14a09ee0 452 TIGRFAM TIGR03467 HpnE: squalene-associated FAD-dependent desaturase 7 446 6.1E-85 T 12-10-2018 IPR017830 Hydroxysqualene dehydroxylase HpnE MetaCyc: PWY-7072 JDM601_2304 3fae46a4596ffd2b400f6ccb14a09ee0 452 Gene3D G3DSA:3.50.50.60 2 449 1.6E-40 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_2304 3fae46a4596ffd2b400f6ccb14a09ee0 452 Pfam PF01593 Flavin containing amine oxidoreductase 13 445 6.4E-41 T 12-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 JDM601_1882 c49a55a0455df3b2299b36f25999ed22 136 Pfam PF05305 Protein of unknown function (DUF732) 47 134 3.2E-7 T 12-10-2018 IPR007969 Domain of unknown function DUF732 JDM601_3007 26af3a335243ff3fb3fe5fcc28fa4129 130 Pfam PF12005 Protein of unknown function (DUF3499) 1 127 1.9E-37 T 12-10-2018 IPR021888 Protein of unknown function DUF3499 JDM601_0080 d9cefdfcad5fcdffd16ca206329ba8d6 153 SUPERFAMILY SSF54637 9 149 2.56E-26 T 12-10-2018 IPR029069 HotDog domain superfamily JDM601_0080 d9cefdfcad5fcdffd16ca206329ba8d6 153 Gene3D G3DSA:3.10.129.10 5 153 2.8E-38 T 12-10-2018 JDM601_0080 d9cefdfcad5fcdffd16ca206329ba8d6 153 Pfam PF14539 Domain of unknown function (DUF4442) 10 142 8.6E-15 T 12-10-2018 IPR027961 Protein of unknown function DUF4442 JDM601_0650 01170c5504fe668c31b8003e65c0dbed 282 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 11 215 7.9E-12 T 12-10-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 JDM601_0436 c9cdd802a343007abd923a83c6aecb22 256 Gene3D G3DSA:3.40.960.10 146 249 2.0E-5 T 12-10-2018 JDM601_2949 a5367085c7f252cd7aa2d4d6b07b849b 286 Pfam PF00106 short chain dehydrogenase 10 205 6.0E-29 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2949 a5367085c7f252cd7aa2d4d6b07b849b 286 Gene3D G3DSA:3.40.50.720 4 286 1.7E-72 T 12-10-2018 JDM601_2949 a5367085c7f252cd7aa2d4d6b07b849b 286 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 185 9.7E-10 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2949 a5367085c7f252cd7aa2d4d6b07b849b 286 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 92 103 9.7E-10 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2949 a5367085c7f252cd7aa2d4d6b07b849b 286 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 9.7E-10 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2949 a5367085c7f252cd7aa2d4d6b07b849b 286 SUPERFAMILY SSF51735 6 245 2.3E-49 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_1002 d907484ca067cb32d9ab91cea61e58e7 414 Pfam PF00823 PPE family 6 162 2.9E-59 T 12-10-2018 IPR000030 PPE family JDM601_1002 d907484ca067cb32d9ab91cea61e58e7 414 SUPERFAMILY SSF140459 3 174 9.68E-60 T 12-10-2018 JDM601_1002 d907484ca067cb32d9ab91cea61e58e7 414 Pfam PF12484 Polymorphic PE/PPE proteins C terminal 331 411 7.3E-12 T 12-10-2018 IPR022171 PPE family, C-terminal JDM601_1002 d907484ca067cb32d9ab91cea61e58e7 414 Gene3D G3DSA:1.20.1260.20 2 175 1.2E-64 T 12-10-2018 IPR038332 PPE superfamily JDM601_1445 d55466e51e32c5d38f0cd54b3213659d 407 Gene3D G3DSA:3.40.710.30 10 396 1.3E-110 T 12-10-2018 JDM601_1445 d55466e51e32c5d38f0cd54b3213659d 407 SUPERFAMILY SSF56601 13 388 3.92E-66 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like JDM601_1445 d55466e51e32c5d38f0cd54b3213659d 407 Pfam PF00144 Beta-lactamase 31 381 8.6E-64 T 12-10-2018 IPR001466 Beta-lactamase-related JDM601_2544 5f9551d8b9ce5edd34c86f6d31bd5318 291 Pfam PF13452 N-terminal half of MaoC dehydratase 17 124 4.7E-16 T 12-10-2018 IPR039569 N-terminal of MaoC-like dehydratase Reactome: R-HSA-193368|Reactome: R-HSA-2046106|Reactome: R-HSA-389887|Reactome: R-HSA-390247|Reactome: R-HSA-9033241|Reactome: R-HSA-9033500 JDM601_2544 5f9551d8b9ce5edd34c86f6d31bd5318 291 Pfam PF01575 MaoC like domain 167 263 2.6E-24 T 12-10-2018 IPR002539 MaoC-like dehydratase domain JDM601_2544 5f9551d8b9ce5edd34c86f6d31bd5318 291 SUPERFAMILY SSF54637 14 142 8.07E-27 T 12-10-2018 IPR029069 HotDog domain superfamily JDM601_2544 5f9551d8b9ce5edd34c86f6d31bd5318 291 Gene3D G3DSA:3.10.129.10 4 289 5.6E-60 T 12-10-2018 JDM601_2544 5f9551d8b9ce5edd34c86f6d31bd5318 291 SUPERFAMILY SSF54637 170 274 7.19E-24 T 12-10-2018 IPR029069 HotDog domain superfamily JDM601_2974 1d452288c97f98b403f7be831bc65a8e 773 SUPERFAMILY SSF81442 270 750 1.31E-72 T 12-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 JDM601_2974 1d452288c97f98b403f7be831bc65a8e 773 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 278 722 9.7E-61 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 JDM601_2974 1d452288c97f98b403f7be831bc65a8e 773 Gene3D G3DSA:1.20.210.10 217 750 5.8E-162 T 12-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 JDM601_0351 841ad56b53af6af56c8de5b989749065 171 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 11 167 9.7E-35 T 12-10-2018 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 JDM601_0351 841ad56b53af6af56c8de5b989749065 171 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 171 24.377 T 12-10-2018 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 JDM601_0351 841ad56b53af6af56c8de5b989749065 171 SUPERFAMILY SSF53271 8 167 4.2E-34 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like JDM601_0351 841ad56b53af6af56c8de5b989749065 171 Gene3D G3DSA:3.40.50.2020 1 171 1.7E-50 T 12-10-2018 JDM601_0351 841ad56b53af6af56c8de5b989749065 171 Pfam PF00156 Phosphoribosyl transferase domain 39 150 9.9E-12 T 12-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 JDM601_3223 a5787eaba78daefbe62906f9f3537852 488 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 3 456 6.9E-182 T 12-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 JDM601_3223 a5787eaba78daefbe62906f9f3537852 488 SMART SM01240 2 474 0.0 T 12-10-2018 JDM601_3223 a5787eaba78daefbe62906f9f3537852 488 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 290 302 - T 12-10-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 JDM601_3223 a5787eaba78daefbe62906f9f3537852 488 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 3 487 84.318 T 12-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 JDM601_3223 a5787eaba78daefbe62906f9f3537852 488 Pfam PF00571 CBS domain 144 197 9.6E-8 T 12-10-2018 IPR000644 CBS domain JDM601_3223 a5787eaba78daefbe62906f9f3537852 488 Pfam PF00571 CBS domain 88 135 1.3E-7 T 12-10-2018 IPR000644 CBS domain JDM601_3223 a5787eaba78daefbe62906f9f3537852 488 SMART SM00116 152 200 5.8E-7 T 12-10-2018 IPR000644 CBS domain JDM601_3223 a5787eaba78daefbe62906f9f3537852 488 SMART SM00116 91 139 2.0E-8 T 12-10-2018 IPR000644 CBS domain JDM601_3223 a5787eaba78daefbe62906f9f3537852 488 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 3 474 1.5E-152 T 12-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 JDM601_3223 a5787eaba78daefbe62906f9f3537852 488 SUPERFAMILY SSF54631 88 198 1.19E-29 T 12-10-2018 JDM601_3223 a5787eaba78daefbe62906f9f3537852 488 SUPERFAMILY SSF51412 2 478 9.16E-111 T 12-10-2018 JDM601_3223 a5787eaba78daefbe62906f9f3537852 488 Gene3D G3DSA:3.20.20.70 1 487 5.5E-205 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JDM601_3223 a5787eaba78daefbe62906f9f3537852 488 PIRSF PIRSF000130 1 488 3.7E-200 T 12-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 JDM601_3081 1e2bfe655f7a285ebbc0726aac6b3ef0 429 Gene3D G3DSA:1.20.1250.20 1 415 2.7E-63 T 12-10-2018 JDM601_3081 1e2bfe655f7a285ebbc0726aac6b3ef0 429 ProSitePatterns PS00217 Sugar transport proteins signature 2. 98 123 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 JDM601_3081 1e2bfe655f7a285ebbc0726aac6b3ef0 429 SUPERFAMILY SSF103473 1 406 4.84E-56 T 12-10-2018 IPR036259 MFS transporter superfamily JDM601_3081 1e2bfe655f7a285ebbc0726aac6b3ef0 429 Pfam PF00083 Sugar (and other) transporter 1 407 3.1E-32 T 12-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 JDM601_4077 565304fc3c3989059e2901804436723c 635 Pfam PF00501 AMP-binding enzyme 10 479 6.2E-84 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 JDM601_4077 565304fc3c3989059e2901804436723c 635 SUPERFAMILY SSF56801 4 586 1.44E-106 T 12-10-2018 JDM601_4077 565304fc3c3989059e2901804436723c 635 Gene3D G3DSA:3.40.50.12780 4 472 1.4E-145 T 12-10-2018 JDM601_4077 565304fc3c3989059e2901804436723c 635 ProSitePatterns PS00455 Putative AMP-binding domain signature. 161 172 - T 12-10-2018 IPR020845 AMP-binding, conserved site JDM601_4077 565304fc3c3989059e2901804436723c 635 Gene3D G3DSA:3.30.300.30 474 606 4.0E-37 T 12-10-2018 JDM601_1887 5712730bb88e24c4fe512ff4c651a536 124 Gene3D G3DSA:3.40.50.150 1 118 2.3E-13 T 12-10-2018 JDM601_1887 5712730bb88e24c4fe512ff4c651a536 124 SUPERFAMILY SSF53335 1 103 4.3E-11 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JDM601_3019 5fda3cbbd268286add59179b368df9ab 241 Gene3D G3DSA:3.40.50.12780 3 175 5.6E-11 T 12-10-2018 JDM601_3019 5fda3cbbd268286add59179b368df9ab 241 Pfam PF00501 AMP-binding enzyme 26 88 8.5E-6 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 JDM601_3019 5fda3cbbd268286add59179b368df9ab 241 SUPERFAMILY SSF56801 7 239 8.11E-20 T 12-10-2018 JDM601_3019 5fda3cbbd268286add59179b368df9ab 241 TIGRFAM TIGR03089 TIGR03089: TIGR03089 family protein 8 237 4.2E-72 T 12-10-2018 IPR017523 Conserved hypothetical protein CHP03089 JDM601_2895 cac7ccf23df719fd58519d2941880eb0 344 Pfam PF02470 MlaD protein 47 119 1.2E-13 T 12-10-2018 IPR003399 Mce/MlaD JDM601_2895 cac7ccf23df719fd58519d2941880eb0 344 TIGRFAM TIGR00996 Mtu_fam_mce: virulence factor Mce family protein 21 296 4.6E-49 T 12-10-2018 IPR005693 Virulence factor Mce protein JDM601_3497 2ec26853bb9721a02e7a5ab257564568 102 Gene3D G3DSA:3.30.70.100 3 100 3.4E-30 T 12-10-2018 JDM601_3497 2ec26853bb9721a02e7a5ab257564568 102 SUPERFAMILY SSF54909 5 98 1.43E-26 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel JDM601_3497 2ec26853bb9721a02e7a5ab257564568 102 Pfam PF07045 Domain of unknown function (DUF1330) 6 98 1.6E-30 T 12-10-2018 IPR010753 Domain of unknown function DUF1330 JDM601_2224 a27f0cc7373cfbbc5b5bde0e9c525cd1 120 Gene3D G3DSA:2.30.110.10 1 107 1.2E-13 T 12-10-2018 IPR012349 FMN-binding split barrel GO:0048037 JDM601_2224 a27f0cc7373cfbbc5b5bde0e9c525cd1 120 Pfam PF04075 F420H(2)-dependent quinone reductase 1 99 5.6E-9 T 12-10-2018 IPR004378 F420H(2)-dependent quinone reductase GO:0016491|GO:0055114 JDM601_2224 a27f0cc7373cfbbc5b5bde0e9c525cd1 120 TIGRFAM TIGR00026 hi_GC_TIGR00026: deazaflavin-dependent oxidoreductase, nitroreductase family 1 117 2.3E-24 T 12-10-2018 IPR004378 F420H(2)-dependent quinone reductase GO:0016491|GO:0055114 JDM601_3049 6ac9ff6d43030618a2eb1bee413fb5fb 107 SUPERFAMILY SSF52091 1 96 1.12E-11 T 12-10-2018 IPR036513 STAS domain superfamily JDM601_3049 6ac9ff6d43030618a2eb1bee413fb5fb 107 Pfam PF01740 STAS domain 1 92 2.2E-7 T 12-10-2018 IPR002645 STAS domain JDM601_3049 6ac9ff6d43030618a2eb1bee413fb5fb 107 Gene3D G3DSA:3.30.750.24 1 100 1.7E-17 T 12-10-2018 IPR036513 STAS domain superfamily JDM601_1517 42324b37fd7ca01a463ece374edec876 231 Gene3D G3DSA:3.40.50.1400 1 111 1.4E-25 T 12-10-2018 JDM601_1517 42324b37fd7ca01a463ece374edec876 231 SUPERFAMILY SSF53800 1 225 1.31E-32 T 12-10-2018 JDM601_1517 42324b37fd7ca01a463ece374edec876 231 Pfam PF01903 CbiX 6 100 5.6E-16 T 12-10-2018 IPR002762 Cobalamin (vitamin B12) biosynthesis CbiX GO:0009236|GO:0016852 KEGG: 00860+4.99.1.3|MetaCyc: PWY-7377 JDM601_1517 42324b37fd7ca01a463ece374edec876 231 Pfam PF01903 CbiX 124 217 1.8E-11 T 12-10-2018 IPR002762 Cobalamin (vitamin B12) biosynthesis CbiX GO:0009236|GO:0016852 KEGG: 00860+4.99.1.3|MetaCyc: PWY-7377 JDM601_1517 42324b37fd7ca01a463ece374edec876 231 Gene3D G3DSA:3.40.50.1400 115 228 3.3E-18 T 12-10-2018 JDM601_2929 e3b432ca805e3d2574e8eb84dca33ff4 201 Gene3D G3DSA:3.40.50.1240 1 197 1.5E-54 T 12-10-2018 IPR029033 Histidine phosphatase superfamily JDM601_2929 e3b432ca805e3d2574e8eb84dca33ff4 201 PIRSF PIRSF000709 1 103 2.0E-6 T 12-10-2018 JDM601_2929 e3b432ca805e3d2574e8eb84dca33ff4 201 SUPERFAMILY SSF53254 7 194 4.71E-43 T 12-10-2018 IPR029033 Histidine phosphatase superfamily JDM601_2929 e3b432ca805e3d2574e8eb84dca33ff4 201 SMART SM00855 7 154 7.3E-17 T 12-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 JDM601_2929 e3b432ca805e3d2574e8eb84dca33ff4 201 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 8 192 3.6E-43 T 12-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 JDM601_0640 d6321a93e43140592db43913e9200e1c 291 Pfam PF12872 OST-HTH/LOTUS domain 229 286 2.4E-12 T 12-10-2018 IPR025605 OST-HTH/LOTUS domain JDM601_0640 d6321a93e43140592db43913e9200e1c 291 Pfam PF01936 NYN domain 8 176 7.5E-27 T 12-10-2018 IPR021139 NYN domain, limkain-b1-type JDM601_0640 d6321a93e43140592db43913e9200e1c 291 Gene3D G3DSA:1.10.10.1880 229 290 5.0E-9 T 12-10-2018 JDM601_0640 d6321a93e43140592db43913e9200e1c 291 Gene3D G3DSA:3.40.50.1010 37 179 1.0E-18 T 12-10-2018 JDM601_2068 d312dfdc8543ff710e752f725d8048df 991 Gene3D G3DSA:1.20.1640.10 137 355 2.9E-13 T 12-10-2018 JDM601_2068 d312dfdc8543ff710e752f725d8048df 991 SUPERFAMILY SSF82866 130 344 8.5E-29 T 12-10-2018 JDM601_2068 d312dfdc8543ff710e752f725d8048df 991 SUPERFAMILY SSF82866 776 978 2.62E-23 T 12-10-2018 JDM601_2068 d312dfdc8543ff710e752f725d8048df 991 TIGRFAM TIGR03057 xxxLxxG_by_4: X-X-X-Leu-X-X-Gly heptad repeats 671 696 3.7E-6 T 12-10-2018 IPR023908 xxxLxxG heptad repeat JDM601_2068 d312dfdc8543ff710e752f725d8048df 991 Pfam PF03176 MMPL family 44 369 3.5E-86 T 12-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 JDM601_2068 d312dfdc8543ff710e752f725d8048df 991 Pfam PF03176 MMPL family 643 985 1.7E-68 T 12-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 JDM601_4011 3514851015a717d1035ca0b610dcfacb 209 SUPERFAMILY SSF54001 74 185 9.81E-11 T 12-10-2018 IPR038765 Papain-like cysteine peptidase superfamily JDM601_4011 3514851015a717d1035ca0b610dcfacb 209 Pfam PF05257 CHAP domain 80 181 6.2E-10 T 12-10-2018 IPR007921 CHAP domain JDM601_4011 3514851015a717d1035ca0b610dcfacb 209 Gene3D G3DSA:3.90.1720.10 54 209 2.6E-12 T 12-10-2018 JDM601_3146 62e11de4d86f60b184fe20ecb3b96833 263 SUPERFAMILY SSF54292 23 134 6.34E-23 T 12-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 JDM601_3146 62e11de4d86f60b184fe20ecb3b96833 263 SUPERFAMILY SSF46548 135 260 9.59E-34 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 JDM601_3146 62e11de4d86f60b184fe20ecb3b96833 263 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 25 139 9.6E-30 T 12-10-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 JDM601_3146 62e11de4d86f60b184fe20ecb3b96833 263 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 28 256 9.2E-71 T 12-10-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 JDM601_3146 62e11de4d86f60b184fe20ecb3b96833 263 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 176 187 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site JDM601_3146 62e11de4d86f60b184fe20ecb3b96833 263 Gene3D G3DSA:3.10.20.30 17 134 1.6E-28 T 12-10-2018 IPR012675 Beta-grasp domain superfamily JDM601_3146 62e11de4d86f60b184fe20ecb3b96833 263 Gene3D G3DSA:1.10.1060.10 135 262 1.0E-45 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 JDM601_3146 62e11de4d86f60b184fe20ecb3b96833 263 Pfam PF13183 4Fe-4S dicluster domain 174 246 2.7E-11 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain JDM601_2810 db810534ee141c2b31b45ecf4bc8cd20 149 SUPERFAMILY SSF54534 63 137 4.32E-10 T 12-10-2018 JDM601_2810 db810534ee141c2b31b45ecf4bc8cd20 149 PIRSF PIRSF006092 1 139 1.1E-11 T 12-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 JDM601_2810 db810534ee141c2b31b45ecf4bc8cd20 149 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 65 136 2.9E-12 T 12-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 JDM601_2810 db810534ee141c2b31b45ecf4bc8cd20 149 Gene3D G3DSA:3.10.50.30 62 140 7.7E-8 T 12-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 JDM601_0219 90fe4ca0021293b9e6796f9b103912fc 57 Pfam PF11021 Protein of unknown function (DUF2613) 3 56 4.7E-24 T 12-10-2018 IPR022566 Protein of unknown function DUF2613 JDM601_0219 90fe4ca0021293b9e6796f9b103912fc 57 ProDom PD383784 PRECURSOR SIGNAL SECRETED MB0242C RV0236.1/MT0250 ML2569.1 29 56 5.0E-8 T 12-10-2018 JDM601_0274 a3bbde65ee9b23cdfcf31e13319289f3 98 Pfam PF00547 Urease, gamma subunit 33 92 1.2E-19 T 12-10-2018 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 JDM601_0274 a3bbde65ee9b23cdfcf31e13319289f3 98 ProDom PD002319 SUBUNIT GAMMA HYDROLASE UREASE UREA AMIDOHYDROLASE UREASE ALPHA GAMMA/BETA METAL-BINDING 39 90 1.0E-10 T 12-10-2018 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 JDM601_0274 a3bbde65ee9b23cdfcf31e13319289f3 98 SUPERFAMILY SSF54111 32 92 1.83E-17 T 12-10-2018 IPR036463 Urease, gamma subunit superfamily GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 JDM601_0274 a3bbde65ee9b23cdfcf31e13319289f3 98 Gene3D G3DSA:3.30.280.10 28 94 8.5E-20 T 12-10-2018 IPR036463 Urease, gamma subunit superfamily GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 JDM601_4180 c1d70340631bffcc372b388c05e5a97d 294 SUPERFAMILY SSF52540 36 248 1.32E-20 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_4180 c1d70340631bffcc372b388c05e5a97d 294 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 41 244 7.1E-7 T 12-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain JDM601_4180 c1d70340631bffcc372b388c05e5a97d 294 Gene3D G3DSA:3.40.50.300 39 256 4.8E-24 T 12-10-2018 JDM601_4089 fca2a91198064bc8a147c0a735140edd 134 SUPERFAMILY SSF88723 5 133 1.74E-20 T 12-10-2018 IPR029060 PIN-like domain superfamily JDM601_4089 fca2a91198064bc8a147c0a735140edd 134 Pfam PF01850 PIN domain 7 127 2.3E-11 T 12-10-2018 IPR002716 PIN domain JDM601_4089 fca2a91198064bc8a147c0a735140edd 134 Gene3D G3DSA:3.40.50.1010 1 133 5.4E-23 T 12-10-2018 JDM601_3143 86978ad89bcc938a86454e9988493f07 112 Gene3D G3DSA:1.20.1300.10 1 105 9.8E-14 T 12-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 JDM601_3143 86978ad89bcc938a86454e9988493f07 112 SUPERFAMILY SSF81343 1 101 3.49E-20 T 12-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 JDM601_3143 86978ad89bcc938a86454e9988493f07 112 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 1 96 2.7E-17 T 12-10-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 JDM601_3143 86978ad89bcc938a86454e9988493f07 112 PIRSF PIRSF000178 1 106 1.3E-6 T 12-10-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 JDM601_3143 86978ad89bcc938a86454e9988493f07 112 TIGRFAM TIGR02970 succ_dehyd_cytB: succinate dehydrogenase, cytochrome b556 subunit 1 99 6.8E-23 T 12-10-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 JDM601_3685 11b2f352b147a44dc7fff21e331c947a 406 Gene3D G3DSA:1.20.1260.20 5 178 7.0E-60 T 12-10-2018 IPR038332 PPE superfamily JDM601_3685 11b2f352b147a44dc7fff21e331c947a 406 SUPERFAMILY SSF140459 5 177 8.11E-59 T 12-10-2018 JDM601_3685 11b2f352b147a44dc7fff21e331c947a 406 Pfam PF00823 PPE family 8 164 1.9E-58 T 12-10-2018 IPR000030 PPE family JDM601_4202 76a4f58784c6bfecd2add330d181577e 172 SUPERFAMILY SSF55961 22 170 2.28E-16 T 12-10-2018 JDM601_4202 76a4f58784c6bfecd2add330d181577e 172 Gene3D G3DSA:3.30.530.20 20 172 3.0E-9 T 12-10-2018 IPR023393 START-like domain superfamily JDM601_3537 1f0ad47ad5c30d67999b8a04eb10657a 290 SUPERFAMILY SSF161098 22 281 2.09E-32 T 12-10-2018 IPR035906 MetI-like superfamily JDM601_3537 1f0ad47ad5c30d67999b8a04eb10657a 290 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 72 283 2.4E-17 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 JDM601_3537 1f0ad47ad5c30d67999b8a04eb10657a 290 Gene3D G3DSA:1.10.3720.10 47 289 6.9E-32 T 12-10-2018 IPR035906 MetI-like superfamily JDM601_3537 1f0ad47ad5c30d67999b8a04eb10657a 290 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 1 287 8.6E-83 T 12-10-2018 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 JDM601_2998 d6284bb332edc398b69a7195ec38f35e 358 SUPERFAMILY SSF48208 22 337 2.04E-41 T 12-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 JDM601_2998 d6284bb332edc398b69a7195ec38f35e 358 Gene3D G3DSA:1.50.10.10 47 237 1.9E-11 T 12-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 JDM601_3705 5cf90190db88a46d8d1d4ae3c66f0174 297 SUPERFAMILY SSF100950 4 281 1.95E-64 T 12-10-2018 IPR037171 NagB/RpiA transferase-like JDM601_3705 5cf90190db88a46d8d1d4ae3c66f0174 297 Gene3D G3DSA:3.40.1080.10 5 289 5.8E-84 T 12-10-2018 JDM601_3705 5cf90190db88a46d8d1d4ae3c66f0174 297 Gene3D G3DSA:3.30.30.40 116 157 5.8E-84 T 12-10-2018 JDM601_3705 5cf90190db88a46d8d1d4ae3c66f0174 297 SMART SM00882 5 232 2.6E-27 T 12-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 JDM601_3705 5cf90190db88a46d8d1d4ae3c66f0174 297 Pfam PF01144 Coenzyme A transferase 6 232 9.0E-46 T 12-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 JDM601_1536 118ed61786c68cf7d35cf0f47dd714af 579 ProSitePatterns PS00211 ABC transporters family signature. 470 484 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JDM601_1536 118ed61786c68cf7d35cf0f47dd714af 579 Gene3D G3DSA:3.40.50.300 327 575 4.1E-84 T 12-10-2018 JDM601_1536 118ed61786c68cf7d35cf0f47dd714af 579 SUPERFAMILY SSF90123 4 314 3.4E-32 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JDM601_1536 118ed61786c68cf7d35cf0f47dd714af 579 Pfam PF00005 ABC transporter 349 498 1.7E-33 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JDM601_1536 118ed61786c68cf7d35cf0f47dd714af 579 SUPERFAMILY SSF52540 330 568 7.56E-80 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_1536 118ed61786c68cf7d35cf0f47dd714af 579 Gene3D G3DSA:1.20.1560.10 2 314 3.6E-22 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JDM601_1536 118ed61786c68cf7d35cf0f47dd714af 579 SMART SM00382 358 544 4.7E-19 T 12-10-2018 IPR003593 AAA+ ATPase domain JDM601_2723 3a806084211374d89a3524b7de17cfe6 274 PIRSF PIRSF007580 1 269 1.0E-75 T 12-10-2018 IPR016516 Uncharacterised conserved protein UCP07580 JDM601_2723 3a806084211374d89a3524b7de17cfe6 274 Pfam PF10118 Predicted metal-dependent hydrolase 2 250 1.3E-78 T 12-10-2018 IPR016516 Uncharacterised conserved protein UCP07580 JDM601_3014 19db9c636716ef3b019aebf9a4e6cb36 129 Hamap MF_00265 tRNA(fMet)-specific endonuclease VapC [vapC]. 5 127 11.336 T 12-10-2018 IPR022907 VapC family GO:0004540 JDM601_3014 19db9c636716ef3b019aebf9a4e6cb36 129 Pfam PF01850 PIN domain 5 122 8.3E-8 T 12-10-2018 IPR002716 PIN domain JDM601_3014 19db9c636716ef3b019aebf9a4e6cb36 129 SUPERFAMILY SSF88723 5 125 1.18E-21 T 12-10-2018 IPR029060 PIN-like domain superfamily JDM601_3014 19db9c636716ef3b019aebf9a4e6cb36 129 Gene3D G3DSA:3.40.50.1010 4 126 6.4E-22 T 12-10-2018 JDM601_3450 95babcee0961a655f16a7075c1adeee1 144 ProDom PD022193 DEHYDRATASE SCYTALONE LYASE MELANIN BIOSYNTHESIS 3D-STRUCTURE PROBABLE CONIDIATION I SPORULATION 9 133 9.0E-4 T 12-10-2018 IPR004235 Scytalone dehydratase GO:0006582|GO:0030411 JDM601_3450 95babcee0961a655f16a7075c1adeee1 144 SUPERFAMILY SSF54427 6 139 1.47E-35 T 12-10-2018 IPR032710 NTF2-like domain superfamily JDM601_3450 95babcee0961a655f16a7075c1adeee1 144 Gene3D G3DSA:3.10.450.50 4 139 2.8E-33 T 12-10-2018 JDM601_3450 95babcee0961a655f16a7075c1adeee1 144 Pfam PF13577 SnoaL-like domain 6 123 1.6E-24 T 12-10-2018 IPR037401 SnoaL-like domain JDM601_0088 85ef420a29579dc33fb435a8974b85af 341 SUPERFAMILY SSF51735 7 332 8.26E-57 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_0088 85ef420a29579dc33fb435a8974b85af 341 Pfam PF01370 NAD dependent epimerase/dehydratase family 7 235 9.6E-26 T 12-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 JDM601_0088 85ef420a29579dc33fb435a8974b85af 341 Gene3D G3DSA:3.40.50.720 2 332 1.3E-91 T 12-10-2018 JDM601_3887 81304f6ad6eaa6cf9c7d0dad975b1d3f 107 Gene3D G3DSA:1.20.890.50 73 107 3.3E-20 T 12-10-2018 JDM601_3887 81304f6ad6eaa6cf9c7d0dad975b1d3f 107 Pfam PF11774 Lsr2 1 106 8.2E-39 T 12-10-2018 IPR024412 Lsr2 JDM601_3887 81304f6ad6eaa6cf9c7d0dad975b1d3f 107 ProDom PD026347 LSR2-LIKE LSR2 ANTIGEN IMMUNE PRECURSOR RESPONSE SIGNAL PLASMID LYSYL GP61 1 103 5.0E-35 T 12-10-2018 IPR024412 Lsr2 JDM601_3887 81304f6ad6eaa6cf9c7d0dad975b1d3f 107 Gene3D G3DSA:3.30.60.230 1 57 4.4E-27 T 12-10-2018 JDM601_1495 a3a4cfbdd9ba7d723b86c5a01eb18603 351 SUPERFAMILY SSF51735 5 153 6.57E-12 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_1495 a3a4cfbdd9ba7d723b86c5a01eb18603 351 Gene3D G3DSA:3.40.50.720 5 152 2.8E-14 T 12-10-2018 JDM601_2410 b493737a16689cac93e8cc49659cc3a4 221 Pfam PF09335 SNARE associated Golgi protein 32 161 2.8E-16 T 12-10-2018 IPR032816 SNARE associated Golgi protein JDM601_1303 c04335c19807a3613a94f521ebb04d3f 252 PRINTS PR00123 ATP synthase A subunit signature 180 202 1.2E-20 T 12-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 JDM601_1303 c04335c19807a3613a94f521ebb04d3f 252 PRINTS PR00123 ATP synthase A subunit signature 92 108 1.2E-20 T 12-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 JDM601_1303 c04335c19807a3613a94f521ebb04d3f 252 PRINTS PR00123 ATP synthase A subunit signature 164 179 1.2E-20 T 12-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 JDM601_1303 c04335c19807a3613a94f521ebb04d3f 252 PRINTS PR00123 ATP synthase A subunit signature 227 242 1.2E-20 T 12-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 JDM601_1303 c04335c19807a3613a94f521ebb04d3f 252 Gene3D G3DSA:1.20.120.220 84 249 3.0E-43 T 12-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 JDM601_1303 c04335c19807a3613a94f521ebb04d3f 252 Pfam PF00119 ATP synthase A chain 34 240 3.4E-49 T 12-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 JDM601_1303 c04335c19807a3613a94f521ebb04d3f 252 SUPERFAMILY SSF81336 87 240 3.79E-36 T 12-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 JDM601_1303 c04335c19807a3613a94f521ebb04d3f 252 ProSitePatterns PS00449 ATP synthase a subunit signature. 183 192 - T 12-10-2018 IPR023011 ATP synthase, F0 complex, subunit A, active site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 JDM601_1303 c04335c19807a3613a94f521ebb04d3f 252 Hamap MF_01393 ATP synthase subunit a [atpB]. 11 247 14.038 T 12-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 JDM601_1303 c04335c19807a3613a94f521ebb04d3f 252 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 27 243 5.9E-39 T 12-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 JDM601_3121 58d73421fed9ca6c9631b3cba35b206b 410 SUPERFAMILY SSF53098 169 316 6.83E-20 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily JDM601_3121 58d73421fed9ca6c9631b3cba35b206b 410 Pfam PF00665 Integrase core domain 171 274 8.2E-12 T 12-10-2018 IPR001584 Integrase, catalytic core GO:0015074 JDM601_3121 58d73421fed9ca6c9631b3cba35b206b 410 Gene3D G3DSA:3.30.420.10 174 314 8.0E-9 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 JDM601_3687 1c79580997adcdb3e5de64b1e3fe88bb 385 Gene3D G3DSA:3.40.47.10 1 385 2.7E-95 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 JDM601_3687 1c79580997adcdb3e5de64b1e3fe88bb 385 SUPERFAMILY SSF53901 3 232 3.07E-24 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 JDM601_3687 1c79580997adcdb3e5de64b1e3fe88bb 385 PIRSF PIRSF000429 1 361 9.5E-24 T 12-10-2018 IPR002155 Thiolase GO:0016747 JDM601_3687 1c79580997adcdb3e5de64b1e3fe88bb 385 SUPERFAMILY SSF53901 260 376 1.95E-13 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 JDM601_3979 6c39eb18d400ca7af14fe5e52d3d1d16 436 Gene3D G3DSA:3.40.50.150 155 422 1.9E-86 T 12-10-2018 JDM601_3979 6c39eb18d400ca7af14fe5e52d3d1d16 436 Pfam PF02353 Mycolic acid cyclopropane synthetase 146 413 5.4E-94 T 12-10-2018 JDM601_3979 6c39eb18d400ca7af14fe5e52d3d1d16 436 PIRSF PIRSF003085 28 435 2.6E-120 T 12-10-2018 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 JDM601_3979 6c39eb18d400ca7af14fe5e52d3d1d16 436 SUPERFAMILY SSF53335 157 418 7.15E-71 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JDM601_3404 71ec32e419bffb3744b0a32854d766a6 517 Pfam PF00501 AMP-binding enzyme 13 409 4.3E-81 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 JDM601_3404 71ec32e419bffb3744b0a32854d766a6 517 Gene3D G3DSA:3.30.300.30 403 505 4.5E-16 T 12-10-2018 JDM601_3404 71ec32e419bffb3744b0a32854d766a6 517 Gene3D G3DSA:3.40.50.12780 1 402 1.8E-89 T 12-10-2018 JDM601_3404 71ec32e419bffb3744b0a32854d766a6 517 SUPERFAMILY SSF56801 5 503 1.96E-116 T 12-10-2018 JDM601_3404 71ec32e419bffb3744b0a32854d766a6 517 ProSitePatterns PS00455 Putative AMP-binding domain signature. 168 179 - T 12-10-2018 IPR020845 AMP-binding, conserved site JDM601_3787 bf1d59f6772d3c399daa5a91c67d3b26 268 Pfam PF11738 Protein of unknown function (DUF3298) 185 260 3.4E-10 T 12-10-2018 IPR021729 Domain of unknown function DUF3298 JDM601_3787 bf1d59f6772d3c399daa5a91c67d3b26 268 Gene3D G3DSA:3.90.640.20 182 267 1.1E-19 T 12-10-2018 IPR037126 PdaC/RsiV-like superfamily JDM601_3787 bf1d59f6772d3c399daa5a91c67d3b26 268 Gene3D G3DSA:3.30.565.40 41 181 4.3E-30 T 12-10-2018 JDM601_2400 bb1d7a301c3bd9684152df523ad78e0d 150 Pfam PF07681 DoxX 24 112 4.5E-6 T 12-10-2018 IPR032808 DoxX family JDM601_3356 581b39600ada77aa075dcc2ee1e23d01 542 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 181 206 1.4E-6 T 12-10-2018 JDM601_3356 581b39600ada77aa075dcc2ee1e23d01 542 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 11 33 1.4E-6 T 12-10-2018 JDM601_3356 581b39600ada77aa075dcc2ee1e23d01 542 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 139 148 1.4E-6 T 12-10-2018 JDM601_3356 581b39600ada77aa075dcc2ee1e23d01 542 Gene3D G3DSA:3.50.50.60 360 542 1.4E-53 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_3356 581b39600ada77aa075dcc2ee1e23d01 542 Gene3D G3DSA:3.50.50.60 5 294 3.7E-60 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_3356 581b39600ada77aa075dcc2ee1e23d01 542 SUPERFAMILY SSF51905 323 540 6.73E-28 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_3356 581b39600ada77aa075dcc2ee1e23d01 542 Pfam PF13738 Pyridine nucleotide-disulphide oxidoreductase 13 212 1.2E-10 T 12-10-2018 JDM601_3356 581b39600ada77aa075dcc2ee1e23d01 542 SUPERFAMILY SSF51905 8 234 8.78E-46 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_3617 6ab4f411e0be9841cf471cc6fda6974f 286 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 154 249 4.3E-16 T 12-10-2018 JDM601_3617 6ab4f411e0be9841cf471cc6fda6974f 286 SUPERFAMILY SSF51735 3 252 1.18E-43 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_3617 6ab4f411e0be9841cf471cc6fda6974f 286 Gene3D G3DSA:3.40.50.720 2 258 2.5E-47 T 12-10-2018 JDM601_3617 6ab4f411e0be9841cf471cc6fda6974f 286 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 101 117 4.5E-23 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3617 6ab4f411e0be9841cf471cc6fda6974f 286 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 4.5E-23 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3617 6ab4f411e0be9841cf471cc6fda6974f 286 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 4.5E-23 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3617 6ab4f411e0be9841cf471cc6fda6974f 286 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 61 72 4.5E-23 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3617 6ab4f411e0be9841cf471cc6fda6974f 286 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 4.5E-23 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3617 6ab4f411e0be9841cf471cc6fda6974f 286 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 4.5E-23 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2923 edbbd62cab76809db0e547bc0fb7a0f2 228 SUPERFAMILY SSF48498 111 223 2.05E-23 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily JDM601_2923 edbbd62cab76809db0e547bc0fb7a0f2 228 Gene3D G3DSA:1.10.357.10 28 225 1.5E-49 T 12-10-2018 JDM601_2923 edbbd62cab76809db0e547bc0fb7a0f2 228 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 45 58 2.1E-10 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_2923 edbbd62cab76809db0e547bc0fb7a0f2 228 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 66 89 2.1E-10 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_2923 edbbd62cab76809db0e547bc0fb7a0f2 228 Pfam PF00440 Bacterial regulatory proteins, tetR family 46 91 1.2E-17 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_2923 edbbd62cab76809db0e547bc0fb7a0f2 228 SUPERFAMILY SSF46689 32 117 1.85E-20 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JDM601_3468 940f86992769a17fa435fe56f9d3d082 516 Pfam PF02470 MlaD protein 40 113 1.7E-13 T 12-10-2018 IPR003399 Mce/MlaD JDM601_3468 940f86992769a17fa435fe56f9d3d082 516 TIGRFAM TIGR00996 Mtu_fam_mce: virulence factor Mce family protein 9 296 9.7E-70 T 12-10-2018 IPR005693 Virulence factor Mce protein JDM601_2520 c4e79e435ce99fbdf306cfd8f88a969b 514 Pfam PF13193 AMP-binding enzyme C-terminal domain 421 497 3.0E-17 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain JDM601_2520 c4e79e435ce99fbdf306cfd8f88a969b 514 Gene3D G3DSA:3.30.300.310 408 510 1.2E-28 T 12-10-2018 JDM601_2520 c4e79e435ce99fbdf306cfd8f88a969b 514 SUPERFAMILY SSF56801 31 507 7.06E-134 T 12-10-2018 JDM601_2520 c4e79e435ce99fbdf306cfd8f88a969b 514 Gene3D G3DSA:3.40.50.12780 25 405 6.3E-104 T 12-10-2018 JDM601_2520 c4e79e435ce99fbdf306cfd8f88a969b 514 Pfam PF00501 AMP-binding enzyme 41 136 2.5E-21 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 JDM601_2520 c4e79e435ce99fbdf306cfd8f88a969b 514 Pfam PF00501 AMP-binding enzyme 151 412 4.5E-69 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 JDM601_2520 c4e79e435ce99fbdf306cfd8f88a969b 514 ProSitePatterns PS00455 Putative AMP-binding domain signature. 162 173 - T 12-10-2018 IPR020845 AMP-binding, conserved site JDM601_4244 95dce5e8616643886738c476de362102 162 SUPERFAMILY SSF46689 2 48 5.49E-10 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JDM601_4244 95dce5e8616643886738c476de362102 162 Pfam PF00440 Bacterial regulatory proteins, tetR family 1 31 2.5E-10 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_4244 95dce5e8616643886738c476de362102 162 Gene3D G3DSA:1.10.357.10 1 159 7.8E-32 T 12-10-2018 JDM601_2983 034b95ecb87efc445832b3f5d267dbbc 480 TIGRFAM TIGR02946 acyl_WS_DGAT: acyltransferase, WS/DGAT/MGAT 4 458 2.5E-121 T 12-10-2018 IPR014292 Acyltransferase, WS/DGAT/MGAT GO:0016746|GO:0045017 KEGG: 00073+2.3.1.20|KEGG: 00561+2.3.1.20 JDM601_2983 034b95ecb87efc445832b3f5d267dbbc 480 Pfam PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain 4 268 5.1E-57 T 12-10-2018 IPR004255 O-acyltransferase, WSD1, N-terminal GO:0004144|GO:0045017 KEGG: 00073+2.3.1.20|KEGG: 00561+2.3.1.20 JDM601_2983 034b95ecb87efc445832b3f5d267dbbc 480 SUPERFAMILY SSF52777 36 155 5.78E-9 T 12-10-2018 JDM601_2983 034b95ecb87efc445832b3f5d267dbbc 480 Pfam PF06974 Protein of unknown function (DUF1298) 311 455 4.4E-23 T 12-10-2018 IPR009721 O-acyltransferase WSD1, C-terminal GO:0004144 KEGG: 00073+2.3.1.20|KEGG: 00561+2.3.1.20 JDM601_3405 42c51b0fa9210c0a2c23484feb160008 468 Pfam PF02720 Domain of unknown function (DUF222) 47 380 9.9E-57 T 12-10-2018 IPR003870 Domain of unknown function DUF222 JDM601_2250 d0b6ef965942473556e569649b2e3299 154 TIGRFAM TIGR01994 SUF_scaf_2: SUF system FeS assembly protein, NifU family 3 141 6.8E-49 T 12-10-2018 JDM601_2250 d0b6ef965942473556e569649b2e3299 154 Pfam PF01592 NifU-like N terminal domain 7 129 9.4E-33 T 12-10-2018 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 JDM601_2250 d0b6ef965942473556e569649b2e3299 154 SUPERFAMILY SSF82649 3 145 1.73E-44 T 12-10-2018 JDM601_2250 d0b6ef965942473556e569649b2e3299 154 Gene3D G3DSA:3.90.1010.10 1 143 1.2E-46 T 12-10-2018 JDM601_0111 eaa6c38b4e05921a6dd6eb78e1125ed5 408 Pfam PF00067 Cytochrome P450 230 379 5.4E-16 T 12-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_0111 eaa6c38b4e05921a6dd6eb78e1125ed5 408 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 352 361 - T 12-10-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 JDM601_0111 eaa6c38b4e05921a6dd6eb78e1125ed5 408 Gene3D G3DSA:1.10.630.10 2 408 4.8E-91 T 12-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_0111 eaa6c38b4e05921a6dd6eb78e1125ed5 408 SUPERFAMILY SSF48264 12 408 2.1E-72 T 12-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_0111 eaa6c38b4e05921a6dd6eb78e1125ed5 408 PRINTS PR00359 B-class P450 signature 144 160 1.2E-22 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_0111 eaa6c38b4e05921a6dd6eb78e1125ed5 408 PRINTS PR00359 B-class P450 signature 98 109 1.2E-22 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_0111 eaa6c38b4e05921a6dd6eb78e1125ed5 408 PRINTS PR00359 B-class P450 signature 359 370 1.2E-22 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_0111 eaa6c38b4e05921a6dd6eb78e1125ed5 408 PRINTS PR00359 B-class P450 signature 329 344 1.2E-22 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_0111 eaa6c38b4e05921a6dd6eb78e1125ed5 408 PRINTS PR00359 B-class P450 signature 161 176 1.2E-22 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_0111 eaa6c38b4e05921a6dd6eb78e1125ed5 408 PRINTS PR00359 B-class P450 signature 284 295 1.2E-22 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_0111 eaa6c38b4e05921a6dd6eb78e1125ed5 408 PRINTS PR00359 B-class P450 signature 350 359 1.2E-22 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_0111 eaa6c38b4e05921a6dd6eb78e1125ed5 408 PRINTS PR00359 B-class P450 signature 301 328 1.2E-22 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_1093 c1bc765a01e5483dd69547c16c3fd72e 428 SUPERFAMILY SSF51556 9 381 7.61E-80 T 12-10-2018 IPR032466 Metal-dependent hydrolase JDM601_1093 c1bc765a01e5483dd69547c16c3fd72e 428 Pfam PF04909 Amidohydrolase 89 373 4.7E-28 T 12-10-2018 IPR006680 Amidohydrolase-related GO:0016787 JDM601_1093 c1bc765a01e5483dd69547c16c3fd72e 428 Gene3D G3DSA:3.20.20.140 2 372 1.2E-97 T 12-10-2018 JDM601_3302 c1467f5b63b7af743f57c68723aa5b82 310 Pfam PF04072 Leucine carboxyl methyltransferase 22 206 3.3E-68 T 12-10-2018 IPR007213 Methyltransferase Ppm1/Ppm2/Tcmp GO:0008168|GO:0032259 JDM601_3302 c1467f5b63b7af743f57c68723aa5b82 310 SUPERFAMILY SSF53335 18 295 2.22E-82 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JDM601_3302 c1467f5b63b7af743f57c68723aa5b82 310 Gene3D G3DSA:3.40.50.150 6 295 1.9E-93 T 12-10-2018 JDM601_3302 c1467f5b63b7af743f57c68723aa5b82 310 TIGRFAM TIGR00027 mthyl_TIGR00027: methyltransferase, TIGR00027 family 20 288 7.7E-89 T 12-10-2018 IPR011610 S-adenosyl-L-methionine-dependent methyltransferase, putative GO:0008168 JDM601_3668 be0d473c4a853d81e25d12e0eaa01d88 390 Gene3D G3DSA:3.30.530.90 156 385 5.1E-103 T 12-10-2018 JDM601_3668 be0d473c4a853d81e25d12e0eaa01d88 390 SUPERFAMILY SSF55961 124 341 1.65E-32 T 12-10-2018 JDM601_3668 be0d473c4a853d81e25d12e0eaa01d88 390 SUPERFAMILY SSF50022 21 132 5.11E-28 T 12-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 JDM601_3668 be0d473c4a853d81e25d12e0eaa01d88 390 Pfam PF00355 Rieske [2Fe-2S] domain 26 108 7.5E-17 T 12-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 JDM601_3668 be0d473c4a853d81e25d12e0eaa01d88 390 Gene3D G3DSA:2.102.10.10 21 155 9.2E-46 T 12-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 JDM601_1592 9de908ddcdeda6f0979c4fab4f67fb04 508 Gene3D G3DSA:3.30.2290.10 11 210 2.9E-15 T 12-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal JDM601_1592 9de908ddcdeda6f0979c4fab4f67fb04 508 Pfam PF01523 Putative modulator of DNA gyrase 34 347 8.7E-53 T 12-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 JDM601_1592 9de908ddcdeda6f0979c4fab4f67fb04 508 SUPERFAMILY SSF111283 16 498 1.29E-93 T 12-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 JDM601_1506 f150a10f8a2f4e6e81342dddcaa5d4f6 193 SUPERFAMILY SSF50118 86 187 3.05E-8 T 12-10-2018 JDM601_1506 f150a10f8a2f4e6e81342dddcaa5d4f6 193 Pfam PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system 88 187 1.2E-8 T 12-10-2018 IPR003477 mRNA interferase PemK-like GO:0003677 JDM601_3318 cc1308bf340711d0a9088bbfc369e690 132 Gene3D G3DSA:3.30.1370.30 4 77 1.2E-27 T 12-10-2018 JDM601_3318 cc1308bf340711d0a9088bbfc369e690 132 ProSitePatterns PS00053 Ribosomal protein S8 signature. 102 119 - T 12-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JDM601_3318 cc1308bf340711d0a9088bbfc369e690 132 Gene3D G3DSA:3.30.1490.10 78 132 9.5E-25 T 12-10-2018 JDM601_3318 cc1308bf340711d0a9088bbfc369e690 132 Pfam PF00410 Ribosomal protein S8 5 132 3.8E-49 T 12-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JDM601_3318 cc1308bf340711d0a9088bbfc369e690 132 SUPERFAMILY SSF56047 3 132 6.15E-45 T 12-10-2018 IPR035987 Ribosomal protein S8 superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JDM601_3318 cc1308bf340711d0a9088bbfc369e690 132 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 132 31.303 T 12-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JDM601_3455 c4b3731080fe6c5e9f83b9bfad57b316 440 Gene3D G3DSA:3.20.20.30 3 358 1.6E-80 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 JDM601_3455 c4b3731080fe6c5e9f83b9bfad57b316 440 Pfam PF00296 Luciferase-like monooxygenase 23 326 3.0E-48 T 12-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 JDM601_3455 c4b3731080fe6c5e9f83b9bfad57b316 440 SUPERFAMILY SSF51679 3 354 5.63E-69 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 JDM601_0210 3e473334c379ad6ed2552cc4a6164c2c 325 Pfam PF02126 Phosphotriesterase family 11 320 2.4E-130 T 12-10-2018 IPR001559 Phosphotriesterase GO:0008270|GO:0009056 JDM601_0210 3e473334c379ad6ed2552cc4a6164c2c 325 Gene3D G3DSA:3.20.20.140 2 325 5.7E-113 T 12-10-2018 JDM601_0210 3e473334c379ad6ed2552cc4a6164c2c 325 ProSitePatterns PS01322 Phosphotriesterase family signature 1. 17 25 - T 12-10-2018 IPR017947 Aryldialkylphosphatase, zinc-binding site GO:0008270|GO:0009056|GO:0016788 JDM601_0210 3e473334c379ad6ed2552cc4a6164c2c 325 SUPERFAMILY SSF51556 1 320 1.99E-85 T 12-10-2018 IPR032466 Metal-dependent hydrolase JDM601_1013 11000552913a4bb8d451cf5e29582217 176 Gene3D G3DSA:2.60.120.10 37 161 5.8E-21 T 12-10-2018 IPR014710 RmlC-like jelly roll fold JDM601_1013 11000552913a4bb8d451cf5e29582217 176 SUPERFAMILY SSF51182 30 173 2.97E-30 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily JDM601_1013 11000552913a4bb8d451cf5e29582217 176 Pfam PF05995 Cysteine dioxygenase type I 56 155 2.7E-17 T 12-10-2018 IPR010300 Cysteine dioxygenase type I GO:0005506|GO:0016702|GO:0055114 KEGG: 00270+1.13.11.20|KEGG: 00430+1.13.11.20|MetaCyc: PWY-5331|Reactome: R-HSA-1614558 JDM601_4313 61d887f251651bf4d39486c037594617 280 Pfam PF08044 Domain of unknown function (DUF1707) 9 61 1.0E-17 T 12-10-2018 IPR012551 Protein of unknown function DUF1707 JDM601_2715 9b87562a955f43a108cfe49f620d7230 365 Pfam PF00206 Lyase 50 253 6.0E-25 T 12-10-2018 IPR022761 Fumarate lyase, N-terminal JDM601_2715 9b87562a955f43a108cfe49f620d7230 365 SUPERFAMILY SSF48557 2 346 2.51E-59 T 12-10-2018 IPR008948 L-Aspartase-like GO:0003824 JDM601_2715 9b87562a955f43a108cfe49f620d7230 365 Gene3D G3DSA:1.20.200.30 1 338 2.8E-88 T 12-10-2018 JDM601_2715 9b87562a955f43a108cfe49f620d7230 365 PRINTS PR00145 Argininosuccinate lyase family signature 98 118 5.3E-6 T 12-10-2018 JDM601_2715 9b87562a955f43a108cfe49f620d7230 365 PRINTS PR00145 Argininosuccinate lyase family signature 233 249 5.3E-6 T 12-10-2018 JDM601_2715 9b87562a955f43a108cfe49f620d7230 365 PRINTS PR00145 Argininosuccinate lyase family signature 57 79 5.3E-6 T 12-10-2018 JDM601_2715 9b87562a955f43a108cfe49f620d7230 365 PRINTS PR00145 Argininosuccinate lyase family signature 145 161 5.3E-6 T 12-10-2018 JDM601_2715 9b87562a955f43a108cfe49f620d7230 365 ProSitePatterns PS00163 Fumarate lyases signature. 233 242 - T 12-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 JDM601_2715 9b87562a955f43a108cfe49f620d7230 365 PRINTS PR00149 Fumarate lyase superfamily signature 103 121 6.3E-13 T 12-10-2018 IPR000362 Fumarate lyase family JDM601_2715 9b87562a955f43a108cfe49f620d7230 365 PRINTS PR00149 Fumarate lyase superfamily signature 233 249 6.3E-13 T 12-10-2018 IPR000362 Fumarate lyase family JDM601_2715 9b87562a955f43a108cfe49f620d7230 365 PRINTS PR00149 Fumarate lyase superfamily signature 58 76 6.3E-13 T 12-10-2018 IPR000362 Fumarate lyase family JDM601_2512 27b8f1a82dd930e3020625b48ee71ec3 443 Gene3D G3DSA:1.20.1250.20 1 435 6.9E-68 T 12-10-2018 JDM601_2512 27b8f1a82dd930e3020625b48ee71ec3 443 SUPERFAMILY SSF103473 2 429 2.88E-62 T 12-10-2018 IPR036259 MFS transporter superfamily JDM601_2512 27b8f1a82dd930e3020625b48ee71ec3 443 Pfam PF07690 Major Facilitator Superfamily 42 376 1.8E-27 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 JDM601_1384 ba4aa8057d83537d48dc81ce016cb2c4 129 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 4 129 21.123 T 12-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 JDM601_1384 ba4aa8057d83537d48dc81ce016cb2c4 129 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 5 105 3.2E-18 T 12-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 JDM601_1384 ba4aa8057d83537d48dc81ce016cb2c4 129 Gene3D G3DSA:3.90.470.20 2 129 4.7E-52 T 12-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 JDM601_1384 ba4aa8057d83537d48dc81ce016cb2c4 129 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 68 128 9.0E-5 T 12-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 JDM601_1384 ba4aa8057d83537d48dc81ce016cb2c4 129 SUPERFAMILY SSF56214 3 128 8.5E-22 T 12-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 JDM601_1384 ba4aa8057d83537d48dc81ce016cb2c4 129 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 3 128 5.4E-39 T 12-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 JDM601_1984 910e8905b78376a1418caaf67e068da0 376 Gene3D G3DSA:3.20.20.70 1 370 6.9E-91 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JDM601_1984 910e8905b78376a1418caaf67e068da0 376 SUPERFAMILY SSF51412 1 364 1.98E-48 T 12-10-2018 JDM601_1984 910e8905b78376a1418caaf67e068da0 376 Pfam PF03060 Nitronate monooxygenase 6 310 1.2E-48 T 12-10-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 JDM601_0565 4dc72587691757ac970c2cd6a33747f4 158 Gene3D G3DSA:1.10.3450.10 45 157 8.4E-18 T 12-10-2018 JDM601_0565 4dc72587691757ac970c2cd6a33747f4 158 SUPERFAMILY SSF140663 32 144 4.45E-29 T 12-10-2018 IPR023203 TTHA0068-like superfamily JDM601_0565 4dc72587691757ac970c2cd6a33747f4 158 Pfam PF03745 Domain of unknown function (DUF309) 50 106 2.1E-19 T 12-10-2018 IPR005500 Protein of unknown function DUF309 JDM601_3316 d2a7e29d7781de5c443445afc481c798 135 Gene3D G3DSA:3.30.420.100 21 135 4.2E-39 T 12-10-2018 JDM601_3316 d2a7e29d7781de5c443445afc481c798 135 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 23 135 1.5E-37 T 12-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 JDM601_3316 d2a7e29d7781de5c443445afc481c798 135 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 21 135 26.841 T 12-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 JDM601_3316 d2a7e29d7781de5c443445afc481c798 135 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 22 135 5.0E-47 T 12-10-2018 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 JDM601_3316 d2a7e29d7781de5c443445afc481c798 135 SUPERFAMILY SSF53137 22 133 2.07E-46 T 12-10-2018 JDM601_2576 60905beb47f086e49cda7158eb795796 242 Gene3D G3DSA:3.40.50.150 4 188 1.3E-43 T 12-10-2018 JDM601_2576 60905beb47f086e49cda7158eb795796 242 SUPERFAMILY SSF53335 8 182 7.45E-33 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JDM601_2576 60905beb47f086e49cda7158eb795796 242 Pfam PF13649 Methyltransferase domain 45 134 1.9E-16 T 12-10-2018 JDM601_0069 e3a630d44148b6ff8e4cd6eb845b6487 203 Pfam PF00583 Acetyltransferase (GNAT) family 53 178 4.3E-9 T 12-10-2018 IPR000182 GNAT domain JDM601_0069 e3a630d44148b6ff8e4cd6eb845b6487 203 Gene3D G3DSA:3.40.630.30 2 203 2.4E-54 T 12-10-2018 JDM601_0069 e3a630d44148b6ff8e4cd6eb845b6487 203 SUPERFAMILY SSF55729 1 197 1.35E-19 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase JDM601_2136 d1b4531e79559b57143e74910feebbef 154 Pfam PF00578 AhpC/TSA family 4 127 6.4E-32 T 12-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 JDM601_2136 d1b4531e79559b57143e74910feebbef 154 Gene3D G3DSA:3.40.30.10 1 152 3.1E-45 T 12-10-2018 JDM601_2136 d1b4531e79559b57143e74910feebbef 154 SUPERFAMILY SSF52833 3 150 7.16E-43 T 12-10-2018 IPR036249 Thioredoxin-like superfamily JDM601_2136 d1b4531e79559b57143e74910feebbef 154 PIRSF PIRSF000239 1 154 1.9E-20 T 12-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 JDM601_1366 cc0cf33d6c7e4e53a54fe6a0c56e3a43 52 Gene3D G3DSA:1.10.10.60 8 50 1.6E-7 T 12-10-2018 JDM601_1366 cc0cf33d6c7e4e53a54fe6a0c56e3a43 52 Pfam PF02796 Helix-turn-helix domain of resolvase 7 50 9.5E-12 T 12-10-2018 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 JDM601_1366 cc0cf33d6c7e4e53a54fe6a0c56e3a43 52 SUPERFAMILY SSF46689 7 48 5.38E-12 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JDM601_2950 20c871738e8283a52a9cf55ab3b2bff0 308 SUPERFAMILY SSF51197 45 240 6.96E-25 T 12-10-2018 JDM601_2950 20c871738e8283a52a9cf55ab3b2bff0 308 Gene3D G3DSA:2.60.120.620 35 247 1.4E-18 T 12-10-2018 JDM601_2950 20c871738e8283a52a9cf55ab3b2bff0 308 Pfam PF05721 Phytanoyl-CoA dioxygenase (PhyH) 111 217 5.7E-9 T 12-10-2018 IPR008775 Phytanoyl-CoA dioxygenase JDM601_0199 b5de1b12aa2c1b4b71275deb9d93c40d 182 Pfam PF00440 Bacterial regulatory proteins, tetR family 2 47 7.8E-14 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_0199 b5de1b12aa2c1b4b71275deb9d93c40d 182 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 1 14 6.0E-8 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_0199 b5de1b12aa2c1b4b71275deb9d93c40d 182 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 22 45 6.0E-8 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_0199 b5de1b12aa2c1b4b71275deb9d93c40d 182 Gene3D G3DSA:1.10.357.10 1 182 3.2E-22 T 12-10-2018 JDM601_0199 b5de1b12aa2c1b4b71275deb9d93c40d 182 SUPERFAMILY SSF46689 1 63 1.65E-13 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JDM601_0199 b5de1b12aa2c1b4b71275deb9d93c40d 182 SUPERFAMILY SSF48498 65 161 1.41E-5 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily JDM601_3538 d685b485baf19129c863263300f11723 367 TIGRFAM TIGR00975 3a0107s03: phosphate ABC transporter, phosphate-binding protein PstS 48 366 1.7E-89 T 12-10-2018 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 JDM601_3538 d685b485baf19129c863263300f11723 367 Pfam PF12849 PBP superfamily domain 40 333 1.4E-55 T 12-10-2018 IPR024370 PBP domain JDM601_3538 d685b485baf19129c863263300f11723 367 Gene3D G3DSA:3.40.190.10 52 353 4.1E-107 T 12-10-2018 JDM601_3538 d685b485baf19129c863263300f11723 367 SUPERFAMILY SSF53850 47 366 4.71E-82 T 12-10-2018 JDM601_3538 d685b485baf19129c863263300f11723 367 PIRSF PIRSF002756 4 367 6.9E-122 T 12-10-2018 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 JDM601_3538 d685b485baf19129c863263300f11723 367 Gene3D G3DSA:3.40.190.10 130 308 4.1E-107 T 12-10-2018 JDM601_0925 1bf82c8f6dab2ca58bb5e8febec44822 259 Gene3D G3DSA:1.10.12.10 204 258 1.5E-25 T 12-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal JDM601_0925 1bf82c8f6dab2ca58bb5e8febec44822 259 Pfam PF00378 Enoyl-CoA hydratase/isomerase 16 258 1.5E-45 T 12-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 JDM601_0925 1bf82c8f6dab2ca58bb5e8febec44822 259 Gene3D G3DSA:3.90.226.10 1 186 2.8E-58 T 12-10-2018 JDM601_0925 1bf82c8f6dab2ca58bb5e8febec44822 259 SUPERFAMILY SSF52096 13 259 3.26E-62 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily JDM601_2385 bb260d33b17c1c07ddeda054fefc409d 83 Gene3D G3DSA:2.60.40.1180 7 79 6.4E-14 T 12-10-2018 IPR013780 Glycosyl hydrolase, all-beta JDM601_0711 72a0adb742544cead532b3055ed0bac2 284 Pfam PF02405 Permease MlaE 67 270 1.1E-52 T 12-10-2018 IPR030802 ABC transporter permease MalE GO:0043190 JDM601_3104 3183ecc60a35418db0f61385cee508fa 68 Pfam PF11387 Protein of unknown function (DUF2795) 13 56 1.4E-11 T 12-10-2018 IPR021527 Protein of unknown function DUF2795 JDM601_3207 ac3a19d6361edb84ce8cf2d48a8658b1 964 SUPERFAMILY SSF82866 165 361 9.81E-24 T 12-10-2018 JDM601_3207 ac3a19d6361edb84ce8cf2d48a8658b1 964 Pfam PF03176 MMPL family 622 949 3.6E-102 T 12-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 JDM601_3207 ac3a19d6361edb84ce8cf2d48a8658b1 964 Pfam PF03176 MMPL family 64 393 1.5E-108 T 12-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 JDM601_3207 ac3a19d6361edb84ce8cf2d48a8658b1 964 SUPERFAMILY SSF82866 731 940 5.1E-28 T 12-10-2018 JDM601_3207 ac3a19d6361edb84ce8cf2d48a8658b1 964 TIGRFAM TIGR00833 actII: transport protein 31 940 0.0 T 12-10-2018 IPR004707 Membrane transport protein MmpL family GO:0016021 JDM601_3156 707f6b564b79947ed3ea71460633ef54 90 SUPERFAMILY SSF55729 5 89 1.34E-22 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase JDM601_3156 707f6b564b79947ed3ea71460633ef54 90 Gene3D G3DSA:3.40.630.30 9 90 2.4E-24 T 12-10-2018 JDM601_3156 707f6b564b79947ed3ea71460633ef54 90 Pfam PF14542 GCN5-related N-acetyl-transferase 14 89 1.7E-24 T 12-10-2018 IPR031165 Yjdj-type Gcn5-related N-acetyltransferase JDM601_0521 dd0a53a3f8ade014a19d27dcf8cd1b1b 134 TIGRFAM TIGR00026 hi_GC_TIGR00026: deazaflavin-dependent oxidoreductase, nitroreductase family 23 129 2.2E-22 T 12-10-2018 IPR004378 F420H(2)-dependent quinone reductase GO:0016491|GO:0055114 JDM601_0521 dd0a53a3f8ade014a19d27dcf8cd1b1b 134 Gene3D G3DSA:2.30.110.10 22 126 3.7E-6 T 12-10-2018 IPR012349 FMN-binding split barrel GO:0048037 JDM601_0964 595839ee58a25902582d7f032aee769d 277 Pfam PF01026 TatD related DNase 22 274 4.2E-69 T 12-10-2018 IPR001130 TatD family GO:0016788 JDM601_0964 595839ee58a25902582d7f032aee769d 277 SUPERFAMILY SSF51556 21 276 4.76E-78 T 12-10-2018 IPR032466 Metal-dependent hydrolase JDM601_0964 595839ee58a25902582d7f032aee769d 277 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 211 227 - T 12-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 JDM601_0964 595839ee58a25902582d7f032aee769d 277 PIRSF PIRSF005902 10 277 4.7E-71 T 12-10-2018 IPR001130 TatD family GO:0016788 JDM601_0964 595839ee58a25902582d7f032aee769d 277 Gene3D G3DSA:3.20.20.140 16 275 2.1E-78 T 12-10-2018 JDM601_0964 595839ee58a25902582d7f032aee769d 277 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 21 275 4.8E-81 T 12-10-2018 IPR015991 Uncharacterised hydrolase TatD-type GO:0004536 JDM601_4272 074e8d3f0c31e877fea66ba4d09de002 222 Pfam PF03551 Transcriptional regulator PadR-like family 22 92 1.9E-8 T 12-10-2018 IPR005149 Transcription regulator PadR, N-terminal JDM601_4272 074e8d3f0c31e877fea66ba4d09de002 222 Gene3D G3DSA:1.10.10.10 18 101 4.8E-17 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JDM601_4272 074e8d3f0c31e877fea66ba4d09de002 222 SUPERFAMILY SSF46785 17 187 7.1E-30 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JDM601_3790 28ba6a873da97daa81890e0de99c032e 320 Pfam PF02470 MlaD protein 43 113 1.9E-12 T 12-10-2018 IPR003399 Mce/MlaD JDM601_3328 f4313086ff84127c12e384f33487e345 403 TIGRFAM TIGR03923 T7SS_EccE: type VII secretion protein EccE 15 368 5.0E-65 T 12-10-2018 IPR021368 Type VII secretion system protein EccE JDM601_3328 f4313086ff84127c12e384f33487e345 403 Pfam PF11203 Putative type VII ESX secretion system translocon, EccE 195 292 9.1E-19 T 12-10-2018 IPR021368 Type VII secretion system protein EccE JDM601_3435 a80b318162885d1d60cf69d17325c5ca 371 SUPERFAMILY SSF53092 15 148 2.28E-14 T 12-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal JDM601_3435 a80b318162885d1d60cf69d17325c5ca 371 Pfam PF01321 Creatinase/Prolidase N-terminal domain 16 150 1.0E-10 T 12-10-2018 IPR000587 Creatinase, N-terminal GO:0016787 JDM601_3435 a80b318162885d1d60cf69d17325c5ca 371 Pfam PF00557 Metallopeptidase family M24 158 359 3.7E-18 T 12-10-2018 IPR000994 Peptidase M24 JDM601_3435 a80b318162885d1d60cf69d17325c5ca 371 Gene3D G3DSA:3.40.350.10 2 150 1.8E-17 T 12-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal JDM601_3435 a80b318162885d1d60cf69d17325c5ca 371 Gene3D G3DSA:3.90.230.10 151 370 3.3E-29 T 12-10-2018 JDM601_3435 a80b318162885d1d60cf69d17325c5ca 371 SUPERFAMILY SSF55920 150 370 7.98E-34 T 12-10-2018 IPR036005 Creatinase/aminopeptidase-like JDM601_1695 5980fd00cfda6bf0123d2bdeda6bfc05 243 Hamap MF_00719 Adenosylcobinamide-GDP ribazoletransferase [cobS]. 1 243 37.932 T 12-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 JDM601_1695 5980fd00cfda6bf0123d2bdeda6bfc05 243 Pfam PF02654 Cobalamin-5-phosphate synthase 12 237 6.1E-42 T 12-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 JDM601_3398 7de0ace75a28de0194bcc7b3da014e71 228 Gene3D G3DSA:3.10.129.10 80 198 2.2E-27 T 12-10-2018 JDM601_3398 7de0ace75a28de0194bcc7b3da014e71 228 SUPERFAMILY SSF54637 30 201 1.06E-23 T 12-10-2018 IPR029069 HotDog domain superfamily JDM601_3398 7de0ace75a28de0194bcc7b3da014e71 228 Gene3D G3DSA:1.20.58.350 28 79 2.2E-27 T 12-10-2018 JDM601_0861 d60a022df4bc28790b7c7a3e52b96ee6 444 Pfam PF00487 Fatty acid desaturase 70 339 2.4E-32 T 12-10-2018 IPR005804 Fatty acid desaturase domain GO:0006629 JDM601_2149 65ab03041fba96699b3ed8dfe053b40e 136 TIGRFAM TIGR00026 hi_GC_TIGR00026: deazaflavin-dependent oxidoreductase, nitroreductase family 39 126 1.6E-19 T 12-10-2018 IPR004378 F420H(2)-dependent quinone reductase GO:0016491|GO:0055114 JDM601_2149 65ab03041fba96699b3ed8dfe053b40e 136 Pfam PF04075 F420H(2)-dependent quinone reductase 37 103 2.3E-5 T 12-10-2018 IPR004378 F420H(2)-dependent quinone reductase GO:0016491|GO:0055114 JDM601_2149 65ab03041fba96699b3ed8dfe053b40e 136 Gene3D G3DSA:2.30.110.10 36 130 1.9E-6 T 12-10-2018 IPR012349 FMN-binding split barrel GO:0048037 JDM601_0177 5b5a70b790f17d08525752ea0619636b 73 SUPERFAMILY SSF48498 11 60 5.11E-6 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily JDM601_3434 57bc34b5d2768abf5a2c0a61bc4a1945 321 SUPERFAMILY SSF52096 16 274 1.26E-37 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily JDM601_3434 57bc34b5d2768abf5a2c0a61bc4a1945 321 Gene3D G3DSA:3.90.226.10 12 315 3.8E-46 T 12-10-2018 JDM601_3434 57bc34b5d2768abf5a2c0a61bc4a1945 321 Pfam PF00378 Enoyl-CoA hydratase/isomerase 123 256 5.9E-11 T 12-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 JDM601_2141 32c4b64bcfa842e5e5271a0d8c3fafb5 261 SUPERFAMILY SSF51366 8 261 2.9E-79 T 12-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 JDM601_2141 32c4b64bcfa842e5e5271a0d8c3fafb5 261 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 7 261 3.5E-112 T 12-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 JDM601_2141 32c4b64bcfa842e5e5271a0d8c3fafb5 261 Pfam PF00977 Histidine biosynthesis protein 10 245 4.9E-86 T 12-10-2018 IPR006062 Histidine biosynthesis GO:0000105 JDM601_2141 32c4b64bcfa842e5e5271a0d8c3fafb5 261 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 6 261 47.684 T 12-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 JDM601_2141 32c4b64bcfa842e5e5271a0d8c3fafb5 261 Gene3D G3DSA:3.20.20.70 6 261 7.1E-103 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JDM601_4035 f13d920bc27664ebf37b1ac2da050881 196 Pfam PF06475 Putative glycolipid-binding 13 195 5.7E-53 T 12-10-2018 IPR009467 Putative glycolipid-binding protein JDM601_4035 f13d920bc27664ebf37b1ac2da050881 196 SUPERFAMILY SSF159275 8 196 1.14E-49 T 12-10-2018 JDM601_0828 7e0d7a6ddf316fa0f0c9c2c042124f29 243 SUPERFAMILY SSF52096 4 242 2.4E-62 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily JDM601_0828 7e0d7a6ddf316fa0f0c9c2c042124f29 243 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 90 110 - T 12-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 JDM601_0828 7e0d7a6ddf316fa0f0c9c2c042124f29 243 Gene3D G3DSA:3.90.226.10 1 243 4.1E-75 T 12-10-2018 JDM601_0828 7e0d7a6ddf316fa0f0c9c2c042124f29 243 Pfam PF00378 Enoyl-CoA hydratase/isomerase 7 242 6.3E-45 T 12-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 JDM601_1752 5b2a4f564261e6e22c6b18a70c4b301b 226 SUPERFAMILY SSF53271 14 219 1.19E-47 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like JDM601_1752 5b2a4f564261e6e22c6b18a70c4b301b 226 Pfam PF00156 Phosphoribosyl transferase domain 20 206 1.5E-20 T 12-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 JDM601_1752 5b2a4f564261e6e22c6b18a70c4b301b 226 Gene3D G3DSA:3.30.1310.20 66 127 5.0E-72 T 12-10-2018 JDM601_1752 5b2a4f564261e6e22c6b18a70c4b301b 226 Gene3D G3DSA:3.40.50.2020 15 215 5.0E-72 T 12-10-2018 JDM601_4250 4394ba60883ee096249fdd5063753543 293 Gene3D G3DSA:3.10.180.10 1 122 1.2E-30 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase JDM601_4250 4394ba60883ee096249fdd5063753543 293 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 134 256 2.0E-17 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain JDM601_4250 4394ba60883ee096249fdd5063753543 293 SUPERFAMILY SSF54593 3 266 3.84E-30 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase JDM601_4250 4394ba60883ee096249fdd5063753543 293 Gene3D G3DSA:3.10.180.10 125 290 3.4E-46 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase JDM601_3938 103d2b2ac714e95a2b17628741e6d5bd 73 Pfam PF14029 Protein of unknown function (DUF4244) 21 70 4.7E-22 T 12-10-2018 IPR025338 Protein of unknown function DUF4244 JDM601_2960 f227829a353211cb1b3a7867e559b63b 399 Pfam PF00823 PPE family 6 161 1.5E-58 T 12-10-2018 IPR000030 PPE family JDM601_2960 f227829a353211cb1b3a7867e559b63b 399 Gene3D G3DSA:1.20.1260.20 1 173 3.3E-61 T 12-10-2018 IPR038332 PPE superfamily JDM601_2960 f227829a353211cb1b3a7867e559b63b 399 SUPERFAMILY SSF140459 3 174 1.33E-58 T 12-10-2018 JDM601_2960 f227829a353211cb1b3a7867e559b63b 399 Pfam PF12484 Polymorphic PE/PPE proteins C terminal 302 394 2.9E-12 T 12-10-2018 IPR022171 PPE family, C-terminal JDM601_1608 810ec49dfb51bc587659fafa642d4118 306 SUPERFAMILY SSF47240 8 236 1.24E-39 T 12-10-2018 IPR009078 Ferritin-like superfamily JDM601_3730 7653115da93a6ac6d61a6b31b0bd650c 61 Gene3D G3DSA:3.40.50.720 2 59 2.2E-10 T 12-10-2018 JDM601_3730 7653115da93a6ac6d61a6b31b0bd650c 61 SUPERFAMILY SSF51735 2 44 2.06E-10 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_3730 7653115da93a6ac6d61a6b31b0bd650c 61 Pfam PF00106 short chain dehydrogenase 7 44 8.0E-7 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3963 39b5fce4f986d0fb01b59df8bdcb4c44 371 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 47 313 7.5E-45 T 12-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme JDM601_3963 39b5fce4f986d0fb01b59df8bdcb4c44 371 Gene3D G3DSA:3.40.50.1100 65 171 2.8E-69 T 12-10-2018 JDM601_3963 39b5fce4f986d0fb01b59df8bdcb4c44 371 SUPERFAMILY SSF53686 34 350 8.25E-68 T 12-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme JDM601_3963 39b5fce4f986d0fb01b59df8bdcb4c44 371 Gene3D G3DSA:3.40.50.1100 48 337 2.8E-69 T 12-10-2018 JDM601_1321 36742b80a7681dd5bbfc350c4461799e 424 TIGRFAM TIGR03814 Gln_ase: glutaminase A 17 303 3.1E-104 T 12-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 JDM601_1321 36742b80a7681dd5bbfc350c4461799e 424 SUPERFAMILY SSF56601 5 305 5.03E-107 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like JDM601_1321 36742b80a7681dd5bbfc350c4461799e 424 SUPERFAMILY SSF52091 321 417 5.69E-5 T 12-10-2018 IPR036513 STAS domain superfamily JDM601_1321 36742b80a7681dd5bbfc350c4461799e 424 Gene3D G3DSA:3.40.710.10 2 306 7.7E-124 T 12-10-2018 JDM601_1321 36742b80a7681dd5bbfc350c4461799e 424 Hamap MF_00313 Glutaminase [glsA]. 5 305 41.252 T 12-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 JDM601_1321 36742b80a7681dd5bbfc350c4461799e 424 Pfam PF04960 Glutaminase 22 303 5.2E-116 T 12-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 JDM601_1321 36742b80a7681dd5bbfc350c4461799e 424 Gene3D G3DSA:3.30.750.24 310 404 3.5E-14 T 12-10-2018 IPR036513 STAS domain superfamily JDM601_4293 526155cb661626b5861ddffcd964b76a 300 Pfam PF00753 Metallo-beta-lactamase superfamily 68 275 4.3E-26 T 12-10-2018 IPR001279 Metallo-beta-lactamase JDM601_4293 526155cb661626b5861ddffcd964b76a 300 SUPERFAMILY SSF56281 11 296 2.23E-48 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like JDM601_4293 526155cb661626b5861ddffcd964b76a 300 Gene3D G3DSA:3.60.15.10 9 300 1.2E-75 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like JDM601_4293 526155cb661626b5861ddffcd964b76a 300 SMART SM00849 68 275 4.3E-21 T 12-10-2018 IPR001279 Metallo-beta-lactamase JDM601_0518 a449038d5a75129ba0bcc15ea140997b 409 Pfam PF08007 Cupin superfamily protein 28 272 1.9E-38 T 12-10-2018 IPR003347 JmjC domain JDM601_0518 a449038d5a75129ba0bcc15ea140997b 409 SUPERFAMILY SSF51197 20 300 4.39E-39 T 12-10-2018 JDM601_0518 a449038d5a75129ba0bcc15ea140997b 409 Gene3D G3DSA:2.60.120.650 15 236 9.4E-52 T 12-10-2018 JDM601_2767 6d25c591e642b2256583cb79f62e4c8c 272 SUPERFAMILY SSF55811 7 209 1.04E-16 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 JDM601_2767 6d25c591e642b2256583cb79f62e4c8c 272 Gene3D G3DSA:3.90.79.10 8 243 4.6E-63 T 12-10-2018 JDM601_1972 7c9ac848d3c0ec7cbce9e37802ed1872 144 Pfam PF10604 Polyketide cyclase / dehydrase and lipid transport 2 142 4.6E-17 T 12-10-2018 IPR019587 Polyketide cyclase/dehydrase JDM601_1972 7c9ac848d3c0ec7cbce9e37802ed1872 144 Gene3D G3DSA:3.30.530.20 1 144 4.3E-39 T 12-10-2018 IPR023393 START-like domain superfamily JDM601_1972 7c9ac848d3c0ec7cbce9e37802ed1872 144 SUPERFAMILY SSF55961 2 143 3.75E-24 T 12-10-2018 JDM601_2654 d18017bb74b8b21ce9162bde4be77ec7 209 Pfam PF01965 DJ-1/PfpI family 2 165 1.0E-26 T 12-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 JDM601_2654 d18017bb74b8b21ce9162bde4be77ec7 209 SUPERFAMILY SSF52317 2 189 2.13E-45 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like JDM601_2654 d18017bb74b8b21ce9162bde4be77ec7 209 Gene3D G3DSA:3.40.50.880 1 209 1.5E-64 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like JDM601_3917 051dcee6f853f7d16d3da6fd4f285bf8 144 Pfam PF10066 Uncharacterized conserved protein (DUF2304) 3 107 2.7E-25 T 12-10-2018 IPR019277 Protein of unknown function DUF2304 JDM601_4025 8bd7d655469734ccb30b2be4ed780496 138 SUPERFAMILY SSF103247 9 130 7.59E-36 T 12-10-2018 IPR035923 TT1751-like domain superfamily JDM601_4025 8bd7d655469734ccb30b2be4ed780496 138 PIRSF PIRSF021774 1 133 4.6E-43 T 12-10-2018 IPR016796 Uncharacterised conserved protein UCP021774 JDM601_4025 8bd7d655469734ccb30b2be4ed780496 138 Gene3D G3DSA:3.30.310.70 4 131 2.1E-48 T 12-10-2018 IPR035923 TT1751-like domain superfamily JDM601_4025 8bd7d655469734ccb30b2be4ed780496 138 Pfam PF03625 Domain of unknown function DUF302 36 101 9.0E-26 T 12-10-2018 IPR005180 Domain of unknown function DUF302 JDM601_0157 051636ac517a55f9a3167dd8f9744437 191 Pfam PF03713 Domain of unknown function (DUF305) 45 187 7.7E-40 T 12-10-2018 IPR005183 Domain of unknown function DUF305 JDM601_0157 051636ac517a55f9a3167dd8f9744437 191 Gene3D G3DSA:1.20.1260.10 33 191 5.1E-44 T 12-10-2018 IPR012347 Ferritin-like JDM601_3010 289d52033d0099915ead6c4fe8b22aa7 330 Gene3D G3DSA:3.40.50.10680 7 293 7.7E-91 T 12-10-2018 JDM601_3010 289d52033d0099915ead6c4fe8b22aa7 330 Pfam PF01933 Uncharacterised protein family UPF0052 3 293 2.8E-65 T 12-10-2018 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 JDM601_3010 289d52033d0099915ead6c4fe8b22aa7 330 Gene3D G3DSA:1.10.8.240 47 135 7.7E-91 T 12-10-2018 JDM601_3010 289d52033d0099915ead6c4fe8b22aa7 330 Hamap MF_01257 2-phospho-L-lactate transferase [cofD]. 1 330 136.565 T 12-10-2018 IPR010115 2-phospho-L-lactate transferase GO:0000287|GO:0016780|GO:0051188 KEGG: 00680+2.7.8.28|MetaCyc: PWY-5198 JDM601_3010 289d52033d0099915ead6c4fe8b22aa7 330 SUPERFAMILY SSF142338 3 326 1.31E-80 T 12-10-2018 JDM601_3010 289d52033d0099915ead6c4fe8b22aa7 330 TIGRFAM TIGR01819 F420_cofD: 2-phospho-L-lactate transferase 3 323 2.1E-122 T 12-10-2018 IPR010115 2-phospho-L-lactate transferase GO:0000287|GO:0016780|GO:0051188 KEGG: 00680+2.7.8.28|MetaCyc: PWY-5198 JDM601_3191 4f0df358b99e8defb045acef319cda93 250 Pfam PF08241 Methyltransferase domain 46 134 8.5E-21 T 12-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 JDM601_3191 4f0df358b99e8defb045acef319cda93 250 SUPERFAMILY SSF53335 15 147 1.16E-33 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JDM601_3191 4f0df358b99e8defb045acef319cda93 250 Gene3D G3DSA:3.40.50.150 15 222 5.4E-37 T 12-10-2018 JDM601_3443 3b28b2acb00205c47c63dbd28c6fca56 154 SUPERFAMILY SSF54427 24 136 3.51E-7 T 12-10-2018 IPR032710 NTF2-like domain superfamily JDM601_3443 3b28b2acb00205c47c63dbd28c6fca56 154 Gene3D G3DSA:3.10.450.50 22 148 9.7E-6 T 12-10-2018 JDM601_1571 7b3b7d1b24eb077fadd2ee7f340880b0 295 Gene3D G3DSA:3.40.960.10 193 292 4.5E-14 T 12-10-2018 JDM601_1571 7b3b7d1b24eb077fadd2ee7f340880b0 295 SUPERFAMILY SSF52980 178 288 2.95E-12 T 12-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 JDM601_1571 7b3b7d1b24eb077fadd2ee7f340880b0 295 Pfam PF04480 Protein of unknown function (DUF559) 222 286 3.0E-5 T 12-10-2018 IPR007569 Protein of unknown function DUF559 JDM601_0719 5926cab84b769134851bb6a6fcf2f156 138 SUPERFAMILY SSF50249 19 121 6.17E-18 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold JDM601_0719 5926cab84b769134851bb6a6fcf2f156 138 Pfam PF01796 DUF35 OB-fold domain, acyl-CoA-associated 51 118 3.1E-10 T 12-10-2018 IPR002878 Domain of unknown function DUF35, OB-fold, C-terminal JDM601_0719 5926cab84b769134851bb6a6fcf2f156 138 Pfam PF12172 Rubredoxin-like zinc ribbon domain (DUF35_N) 19 44 9.5E-8 T 12-10-2018 IPR022002 Domain of unknown function DUF35, rubredoxin-like zinc ribbon domain, N-terminal JDM601_3370 030850422750672ddc2e47e310bb803e 381 Gene3D G3DSA:3.40.47.10 1 381 9.2E-95 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 JDM601_3370 030850422750672ddc2e47e310bb803e 381 SUPERFAMILY SSF53901 254 358 1.61E-25 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 JDM601_3370 030850422750672ddc2e47e310bb803e 381 Pfam PF00108 Thiolase, N-terminal domain 4 173 5.6E-11 T 12-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 JDM601_3370 030850422750672ddc2e47e310bb803e 381 SUPERFAMILY SSF53901 3 220 4.51E-36 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 JDM601_3370 030850422750672ddc2e47e310bb803e 381 PIRSF PIRSF000429 1 380 4.9E-41 T 12-10-2018 IPR002155 Thiolase GO:0016747 JDM601_3370 030850422750672ddc2e47e310bb803e 381 Pfam PF02803 Thiolase, C-terminal domain 253 353 4.6E-10 T 12-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 JDM601_2278 9cbbd670ab412ca0d7ce708a31447930 485 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 38 197 7.6E-23 T 12-10-2018 IPR038731 Glycosyltransferase RgtA/B/C/D-like JDM601_1677 cb541f9a25f700596306924e7fc203f8 481 Pfam PF00561 alpha/beta hydrolase fold 70 457 6.5E-74 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 JDM601_1677 cb541f9a25f700596306924e7fc203f8 481 SUPERFAMILY SSF53474 62 455 1.3E-19 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_1305 322a7e88c05bd8d02d24f5fb52323968 177 Pfam PF00430 ATP synthase B/B' CF(0) 33 163 2.2E-30 T 12-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 JDM601_1305 322a7e88c05bd8d02d24f5fb52323968 177 Hamap MF_01398 ATP synthase subunit b [atpF]. 22 165 11.114 T 12-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 JDM601_1305 322a7e88c05bd8d02d24f5fb52323968 177 SUPERFAMILY SSF81573 89 148 3.66E-6 T 12-10-2018 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily JDM601_1324 8f67d0413341abfadf9f0448b15f878f 364 SUPERFAMILY SSF51395 2 347 2.14E-92 T 12-10-2018 JDM601_1324 8f67d0413341abfadf9f0448b15f878f 364 Gene3D G3DSA:3.20.20.70 1 357 1.5E-100 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JDM601_1324 8f67d0413341abfadf9f0448b15f878f 364 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 5 346 1.0E-61 T 12-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 JDM601_0765 cd72756c1edb290075e6cf862910a914 389 Pfam PF00589 Phage integrase family 179 352 5.1E-23 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 JDM601_0765 cd72756c1edb290075e6cf862910a914 389 Pfam PF14659 Phage integrase, N-terminal SAM-like domain 83 131 1.5E-8 T 12-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 JDM601_0765 cd72756c1edb290075e6cf862910a914 389 Gene3D G3DSA:1.10.443.10 179 368 3.6E-46 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 JDM601_0765 cd72756c1edb290075e6cf862910a914 389 Gene3D G3DSA:1.10.150.130 73 178 1.4E-18 T 12-10-2018 IPR010998 Integrase/recombinase, N-terminal JDM601_0765 cd72756c1edb290075e6cf862910a914 389 SUPERFAMILY SSF56349 77 359 1.77E-58 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 JDM601_1704 1d6499e48a9fe9a1fc85d3e961586128 298 Gene3D G3DSA:2.60.40.2880 211 298 1.8E-8 T 12-10-2018 IPR038468 Transport accessory protein MmpS, soluble domain superfamily JDM601_1704 1d6499e48a9fe9a1fc85d3e961586128 298 Pfam PF05423 Mycobacterium membrane protein 203 280 8.3E-6 T 12-10-2018 IPR008693 Transport accessory protein MmpS JDM601_3926 d302ffaf63184a997948f93ac3e4263c 397 Gene3D G3DSA:1.20.1260.20 1 174 1.3E-64 T 12-10-2018 IPR038332 PPE superfamily JDM601_3926 d302ffaf63184a997948f93ac3e4263c 397 SUPERFAMILY SSF140459 2 174 3.92E-59 T 12-10-2018 JDM601_3926 d302ffaf63184a997948f93ac3e4263c 397 Pfam PF00823 PPE family 5 161 1.8E-60 T 12-10-2018 IPR000030 PPE family JDM601_3926 d302ffaf63184a997948f93ac3e4263c 397 Pfam PF12484 Polymorphic PE/PPE proteins C terminal 258 322 7.7E-7 T 12-10-2018 IPR022171 PPE family, C-terminal JDM601_2208 8de33ab6a1be40da6a1339be7ccdedba 232 Gene3D G3DSA:3.40.50.360 7 173 4.7E-16 T 12-10-2018 IPR029039 Flavoprotein-like superfamily JDM601_2208 8de33ab6a1be40da6a1339be7ccdedba 232 SUPERFAMILY SSF52218 20 175 3.29E-15 T 12-10-2018 IPR029039 Flavoprotein-like superfamily JDM601_0538 f735cba64dcdc4d23ebd8866e3c04995 426 Pfam PF01384 Phosphate transporter family 22 320 9.9E-77 T 12-10-2018 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: R-HSA-427652 JDM601_0241 255baa9cb86cc6d7064c161589951be1 121 Pfam PF13806 Rieske-like [2Fe-2S] domain 8 111 1.5E-31 T 12-10-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 JDM601_0241 255baa9cb86cc6d7064c161589951be1 121 TIGRFAM TIGR02378 nirD_assim_sml: nitrite reductase [NAD(P)H], small subunit 8 111 3.8E-28 T 12-10-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 JDM601_0241 255baa9cb86cc6d7064c161589951be1 121 Gene3D G3DSA:2.102.10.10 2 115 2.2E-34 T 12-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 JDM601_0241 255baa9cb86cc6d7064c161589951be1 121 SUPERFAMILY SSF50022 7 114 8.2E-33 T 12-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 JDM601_4210 565499f4f1f3c142b22e9c02d37970b3 379 PRINTS PR00412 Epoxide hydrolase signature 316 332 1.7E-12 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 JDM601_4210 565499f4f1f3c142b22e9c02d37970b3 379 PRINTS PR00412 Epoxide hydrolase signature 347 369 1.7E-12 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 JDM601_4210 565499f4f1f3c142b22e9c02d37970b3 379 PRINTS PR00412 Epoxide hydrolase signature 100 118 1.7E-12 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 JDM601_4210 565499f4f1f3c142b22e9c02d37970b3 379 PRINTS PR00412 Epoxide hydrolase signature 164 177 1.7E-12 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 JDM601_4210 565499f4f1f3c142b22e9c02d37970b3 379 Pfam PF06441 Epoxide hydrolase N terminus 5 109 3.7E-30 T 12-10-2018 IPR010497 Epoxide hydrolase, N-terminal Reactome: R-HSA-211945 JDM601_4210 565499f4f1f3c142b22e9c02d37970b3 379 PIRSF PIRSF001112 4 376 5.7E-108 T 12-10-2018 IPR016292 Epoxide hydrolase GO:0033961 Reactome: R-HSA-211945 JDM601_4210 565499f4f1f3c142b22e9c02d37970b3 379 Gene3D G3DSA:3.40.50.1820 3 377 4.9E-133 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_4210 565499f4f1f3c142b22e9c02d37970b3 379 SUPERFAMILY SSF53474 4 369 5.19E-90 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_0138 85de7cc5bc897fa862739c1e19089feb 354 Pfam PF02470 MlaD protein 55 128 3.3E-14 T 12-10-2018 IPR003399 Mce/MlaD JDM601_0138 85de7cc5bc897fa862739c1e19089feb 354 TIGRFAM TIGR00996 Mtu_fam_mce: virulence factor Mce family protein 33 304 3.4E-49 T 12-10-2018 IPR005693 Virulence factor Mce protein JDM601_1184 ecd5427608e3e7763f958bdd8e89f1a2 103 TIGRFAM TIGR03544 DivI1A_domain: DivIVA domain 49 82 1.1E-10 T 12-10-2018 IPR019933 DivIVA domain JDM601_3235 4a7ce29f815515a927f1712d3b607474 99 Pfam PF04226 Transglycosylase associated protein 49 95 3.7E-12 T 12-10-2018 IPR007341 Transglycosylase-associated protein GO:0016021 JDM601_0308 414c84438d83afc1e9bf695875da75ad 100 Pfam PF05305 Protein of unknown function (DUF732) 8 99 1.9E-24 T 12-10-2018 IPR007969 Domain of unknown function DUF732 JDM601_3171 81a82ce3c0d7c47ef64c0de1da27c434 143 SUPERFAMILY SSF55729 19 125 1.92E-15 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase JDM601_3171 81a82ce3c0d7c47ef64c0de1da27c434 143 Pfam PF13508 Acetyltransferase (GNAT) domain 55 124 1.4E-7 T 12-10-2018 IPR000182 GNAT domain JDM601_3171 81a82ce3c0d7c47ef64c0de1da27c434 143 Gene3D G3DSA:3.40.630.30 4 131 3.2E-23 T 12-10-2018 JDM601_3958 8ad50c1be25a3450b8157eb671bf7012 315 Pfam PF02374 Anion-transporting ATPase 1 157 4.7E-16 T 12-10-2018 IPR025723 Anion-transporting ATPase-like domain Reactome: R-HSA-381038 JDM601_3958 8ad50c1be25a3450b8157eb671bf7012 315 Pfam PF02374 Anion-transporting ATPase 173 223 5.3E-5 T 12-10-2018 IPR025723 Anion-transporting ATPase-like domain Reactome: R-HSA-381038 JDM601_3958 8ad50c1be25a3450b8157eb671bf7012 315 SUPERFAMILY SSF52540 1 219 5.08E-24 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_1633 bf0f1fda3afddc3bbfbef9c0699bd5d9 359 Pfam PF03492 SAM dependent carboxyl methyltransferase 44 335 1.2E-37 T 12-10-2018 IPR005299 SAM dependent carboxyl methyltransferase GO:0008168 JDM601_1633 bf0f1fda3afddc3bbfbef9c0699bd5d9 359 SUPERFAMILY SSF53335 19 357 1.77E-71 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JDM601_1633 bf0f1fda3afddc3bbfbef9c0699bd5d9 359 Gene3D G3DSA:3.40.50.150 19 278 1.6E-122 T 12-10-2018 JDM601_1633 bf0f1fda3afddc3bbfbef9c0699bd5d9 359 Gene3D G3DSA:1.10.1200.270 148 342 1.6E-122 T 12-10-2018 JDM601_4324 d53acd729efe48f3377f084183421f0f 277 Pfam PF10738 Probable lipoprotein LpqN 76 244 1.1E-62 T 12-10-2018 IPR019674 Lipoprotein LpqT, predicted JDM601_4324 d53acd729efe48f3377f084183421f0f 277 Gene3D G3DSA:3.40.1000.10 101 243 4.2E-11 T 12-10-2018 IPR016123 Mog1/PsbP, alpha/beta/alpha sandwich JDM601_3203 858921d39b729ed89720b4e82a7502c5 215 SUPERFAMILY SSF55469 8 215 4.06E-30 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 JDM601_3203 858921d39b729ed89720b4e82a7502c5 215 Gene3D G3DSA:3.40.109.10 4 212 2.5E-34 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 JDM601_3203 858921d39b729ed89720b4e82a7502c5 215 Pfam PF00881 Nitroreductase family 14 190 7.7E-17 T 12-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 JDM601_2936 9296092c16d15be0d2777dc7dc3e32a5 98 Pfam PF13490 Putative zinc-finger 20 53 1.1E-9 T 12-10-2018 IPR027383 Putative zinc-finger JDM601_2936 9296092c16d15be0d2777dc7dc3e32a5 98 TIGRFAM TIGR03988 antisig_RsrA: mycothiol system anti-sigma-R factor 19 94 2.3E-30 T 12-10-2018 IPR024020 Anti sigma-R factor, mycothiol system,RsrA JDM601_2936 9296092c16d15be0d2777dc7dc3e32a5 98 TIGRFAM TIGR02949 anti_SigH_actin: anti-sigma factor, TIGR02949 family 17 94 4.4E-29 T 12-10-2018 IPR014295 Anti-sigma factor JDM601_0488 f9e02c9b531475425e418089ec88722b 808 Pfam PF02687 FtsX-like permease family 707 801 8.7E-10 T 12-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 JDM601_0488 f9e02c9b531475425e418089ec88722b 808 Pfam PF02687 FtsX-like permease family 245 341 3.5E-8 T 12-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 JDM601_2025 2d55cc57047ae5ad231dcc6b2b25991f 302 Gene3D G3DSA:3.40.50.150 18 298 4.3E-103 T 12-10-2018 JDM601_2025 2d55cc57047ae5ad231dcc6b2b25991f 302 PIRSF PIRSF003085 2 302 5.9E-99 T 12-10-2018 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 JDM601_2025 2d55cc57047ae5ad231dcc6b2b25991f 302 Pfam PF02353 Mycolic acid cyclopropane synthetase 11 287 4.7E-113 T 12-10-2018 JDM601_2025 2d55cc57047ae5ad231dcc6b2b25991f 302 SUPERFAMILY SSF53335 19 294 1.35E-73 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JDM601_3397 726d707bbe7e3dc6f51cfcf8b92f0227 291 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 119 139 - T 12-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 JDM601_3397 726d707bbe7e3dc6f51cfcf8b92f0227 291 SUPERFAMILY SSF52096 9 274 1.14E-49 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily JDM601_3397 726d707bbe7e3dc6f51cfcf8b92f0227 291 Pfam PF00378 Enoyl-CoA hydratase/isomerase 18 271 1.3E-30 T 12-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 JDM601_3397 726d707bbe7e3dc6f51cfcf8b92f0227 291 Gene3D G3DSA:3.90.226.10 6 289 9.0E-60 T 12-10-2018 JDM601_3017 3490c1493431e6f3f3b3bd59a7814ebb 289 SUPERFAMILY SSF51735 6 286 3.38E-77 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_3017 3490c1493431e6f3f3b3bd59a7814ebb 289 Gene3D G3DSA:3.40.50.720 7 277 6.7E-88 T 12-10-2018 JDM601_3017 3490c1493431e6f3f3b3bd59a7814ebb 289 Pfam PF04321 RmlD substrate binding domain 6 288 3.9E-97 T 12-10-2018 IPR029903 RmlD-like substrate binding domain Reactome: R-HSA-156581|Reactome: R-HSA-5689880 JDM601_3017 3490c1493431e6f3f3b3bd59a7814ebb 289 Gene3D G3DSA:3.90.25.10 168 283 6.7E-88 T 12-10-2018 JDM601_3017 3490c1493431e6f3f3b3bd59a7814ebb 289 TIGRFAM TIGR01214 rmlD: dTDP-4-dehydrorhamnose reductase 6 287 1.1E-92 T 12-10-2018 IPR005913 dTDP-4-dehydrorhamnose reductase family Reactome: R-HSA-156581|Reactome: R-HSA-5689880 JDM601_3852 d0a50d8b27ad4f7bd0b450635d3433d8 194 Gene3D G3DSA:2.30.110.10 10 194 1.6E-65 T 12-10-2018 IPR012349 FMN-binding split barrel GO:0048037 JDM601_3852 d0a50d8b27ad4f7bd0b450635d3433d8 194 SUPERFAMILY SSF50475 12 166 1.13E-48 T 12-10-2018 JDM601_3852 d0a50d8b27ad4f7bd0b450635d3433d8 194 SMART SM00903 21 166 3.5E-59 T 12-10-2018 IPR002563 Flavin reductase like domain GO:0010181 JDM601_3852 d0a50d8b27ad4f7bd0b450635d3433d8 194 Pfam PF01613 Flavin reductase like domain 22 167 4.5E-37 T 12-10-2018 IPR002563 Flavin reductase like domain GO:0010181 JDM601_2101 20998cf79eb7e834016f03491375a12a 250 Gene3D G3DSA:3.90.550.10 2 244 2.0E-47 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases JDM601_2101 20998cf79eb7e834016f03491375a12a 250 Pfam PF00535 Glycosyl transferase family 2 11 178 5.4E-31 T 12-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 JDM601_2101 20998cf79eb7e834016f03491375a12a 250 SUPERFAMILY SSF53448 10 239 5.3E-44 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases JDM601_1499 aeb371781898787d06319c10948fc273 171 Gene3D G3DSA:2.60.40.1240 46 165 2.2E-11 T 12-10-2018 IPR029050 Immunoprotective extracellular, immunoglobulin-like domain superfamily JDM601_1499 aeb371781898787d06319c10948fc273 171 Pfam PF11611 Domain of unknown function (DUF4352) 72 162 3.0E-7 T 12-10-2018 IPR029051 Domain of unknown function DUF4352 JDM601_0945 0370b8e3402a1626b8a663016741770a 100 SUPERFAMILY SSF47598 13 90 7.78E-19 T 12-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 JDM601_0945 0370b8e3402a1626b8a663016741770a 100 Pfam PF08681 Protein of unknown function (DUF1778) 16 93 4.7E-23 T 12-10-2018 IPR014795 Vibrio phage ICP1, Orf50 JDM601_0945 0370b8e3402a1626b8a663016741770a 100 Gene3D G3DSA:1.20.5.780 10 94 1.7E-16 T 12-10-2018 JDM601_0939 83ab21809e1e979d4dee6f4e6258d1b9 120 Pfam PF09723 Zinc ribbon domain 2 40 5.7E-12 T 12-10-2018 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain JDM601_0939 83ab21809e1e979d4dee6f4e6258d1b9 120 TIGRFAM TIGR02605 CxxC_CxxC_SSSS: putative regulatory protein, FmdB family 2 51 8.3E-17 T 12-10-2018 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain JDM601_0939 83ab21809e1e979d4dee6f4e6258d1b9 120 SMART SM00834 2 41 8.1E-11 T 12-10-2018 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain JDM601_4167 5e74412e41f5228644fb268bdc14742b 242 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 7 227 1.8E-54 T 12-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 JDM601_4167 5e74412e41f5228644fb268bdc14742b 242 SUPERFAMILY SSF51419 4 225 1.31E-72 T 12-10-2018 IPR029066 PLP-binding barrel JDM601_4167 5e74412e41f5228644fb268bdc14742b 242 Gene3D G3DSA:3.20.20.10 1 238 4.6E-82 T 12-10-2018 IPR029066 PLP-binding barrel JDM601_4167 5e74412e41f5228644fb268bdc14742b 242 Pfam PF01168 Alanine racemase, N-terminal domain 11 228 3.5E-23 T 12-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 JDM601_4167 5e74412e41f5228644fb268bdc14742b 242 PIRSF PIRSF004848 2 233 1.6E-66 T 12-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 JDM601_4167 5e74412e41f5228644fb268bdc14742b 242 Hamap MF_02087 Pyridoxal phosphate homeostasis protein. 7 226 27.608 T 12-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 JDM601_3170 aa76ff1754d5cbe18c04b3408cd99b0c 309 TIGRFAM TIGR00380 cobD: cobalamin biosynthesis protein CobD 11 259 4.9E-51 T 12-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 JDM601_3170 aa76ff1754d5cbe18c04b3408cd99b0c 309 Pfam PF03186 CobD/Cbib protein 9 286 1.3E-86 T 12-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 JDM601_3170 aa76ff1754d5cbe18c04b3408cd99b0c 309 Hamap MF_00024 Cobalamin biosynthesis protein CbiB [cbiB]. 1 309 88.891 T 12-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 JDM601_0938 4fe5f283fe87826d668b052b70efc079 217 SMART SM00858 56 118 1.1E-9 T 12-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 JDM601_0938 4fe5f283fe87826d668b052b70efc079 217 Pfam PF08666 SAF domain 57 106 1.5E-6 T 12-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 JDM601_2183 825f0db2c6d4a631f3ffaa803a0ea9aa 254 SUPERFAMILY SSF53335 38 253 3.26E-15 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JDM601_2183 825f0db2c6d4a631f3ffaa803a0ea9aa 254 Gene3D G3DSA:3.40.50.150 21 211 1.9E-10 T 12-10-2018 JDM601_2183 825f0db2c6d4a631f3ffaa803a0ea9aa 254 Pfam PF08241 Methyltransferase domain 54 143 3.4E-8 T 12-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 JDM601_4225 212d882bf35448ba343b2f35bd0ebc16 145 SUPERFAMILY SSF55961 1 134 5.5E-9 T 12-10-2018 JDM601_4181 7c2cf8349de3bfca23439e2aee4e8227 403 Pfam PF02515 CoA-transferase family III 12 377 1.5E-63 T 12-10-2018 IPR003673 CoA-transferase family III GO:0003824 JDM601_4181 7c2cf8349de3bfca23439e2aee4e8227 403 SUPERFAMILY SSF89796 9 400 1.2E-82 T 12-10-2018 IPR023606 CoA-transferase family III domain superfamily JDM601_4181 7c2cf8349de3bfca23439e2aee4e8227 403 Gene3D G3DSA:3.30.1540.10 232 329 3.3E-72 T 12-10-2018 JDM601_4181 7c2cf8349de3bfca23439e2aee4e8227 403 Gene3D G3DSA:3.40.50.10540 11 392 3.3E-72 T 12-10-2018 IPR023606 CoA-transferase family III domain superfamily JDM601_2800 e1c9b4a2906c0d8d31647b5486a17acc 64 Pfam PF04328 Selenoprotein, putative 7 64 1.3E-19 T 12-10-2018 IPR007423 Selenoprotein, putative JDM601_3546 6ee74a4713d202643dc089b890c8b293 90 Pfam PF07210 Protein of unknown function (DUF1416) 1 89 1.5E-37 T 12-10-2018 IPR010814 Protein of unknown function DUF1416 JDM601_3546 6ee74a4713d202643dc089b890c8b293 90 SUPERFAMILY SSF49464 13 65 1.14E-7 T 12-10-2018 IPR008969 Carboxypeptidase-like, regulatory domain superfamily JDM601_3546 6ee74a4713d202643dc089b890c8b293 90 Gene3D G3DSA:2.60.40.1120 12 89 1.1E-5 T 12-10-2018 JDM601_0592 0f27046fac77e97722838e9d9c9586f9 475 Pfam PF02696 Uncharacterized ACR, YdiU/UPF0061 family 16 444 4.1E-110 T 12-10-2018 IPR003846 Uncharacterised protein family UPF0061 JDM601_0592 0f27046fac77e97722838e9d9c9586f9 475 Hamap MF_00692 UPF0061 protein YdiU [ydiU]. 2 461 42.792 T 12-10-2018 IPR003846 Uncharacterised protein family UPF0061 JDM601_0762 00dae6382b29859646d6247e966def9c 172 Pfam PF10547 P22_AR N-terminal domain 3 62 1.0E-16 T 12-10-2018 IPR018875 Antirepressor protein ANT, N-terminal JDM601_2609 dfa73073ea3f82ddf6f0cec2638205fc 469 SUPERFAMILY SSF75304 9 459 1.05E-103 T 12-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 JDM601_2609 dfa73073ea3f82ddf6f0cec2638205fc 469 Gene3D G3DSA:3.90.1300.10 12 468 1.4E-117 T 12-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 JDM601_2609 dfa73073ea3f82ddf6f0cec2638205fc 469 Pfam PF01425 Amidase 33 450 7.8E-98 T 12-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 JDM601_4314 e4a9cf20901c4c1c514e4d92dd83c99f 180 SUPERFAMILY SSF46785 2 169 9.79E-36 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JDM601_4314 e4a9cf20901c4c1c514e4d92dd83c99f 180 Gene3D G3DSA:1.10.10.10 1 93 1.6E-26 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JDM601_4314 e4a9cf20901c4c1c514e4d92dd83c99f 180 Pfam PF03551 Transcriptional regulator PadR-like family 6 81 1.1E-21 T 12-10-2018 IPR005149 Transcription regulator PadR, N-terminal JDM601_3633 54142c660bc81f97e6fa5ea3664d0c65 305 Gene3D G3DSA:3.40.50.720 6 305 4.3E-83 T 12-10-2018 JDM601_3633 54142c660bc81f97e6fa5ea3664d0c65 305 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 155 183 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 JDM601_3633 54142c660bc81f97e6fa5ea3664d0c65 305 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 168 187 4.1E-22 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3633 54142c660bc81f97e6fa5ea3664d0c65 305 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 13 30 4.1E-22 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3633 54142c660bc81f97e6fa5ea3664d0c65 305 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 87 98 4.1E-22 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3633 54142c660bc81f97e6fa5ea3664d0c65 305 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 142 158 4.1E-22 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3633 54142c660bc81f97e6fa5ea3664d0c65 305 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 218 238 4.1E-22 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3633 54142c660bc81f97e6fa5ea3664d0c65 305 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 189 206 4.1E-22 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3633 54142c660bc81f97e6fa5ea3664d0c65 305 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 12 199 0.0018 T 12-10-2018 JDM601_3633 54142c660bc81f97e6fa5ea3664d0c65 305 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 168 187 6.4E-9 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3633 54142c660bc81f97e6fa5ea3664d0c65 305 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 148 156 6.4E-9 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3633 54142c660bc81f97e6fa5ea3664d0c65 305 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 87 98 6.4E-9 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3633 54142c660bc81f97e6fa5ea3664d0c65 305 SUPERFAMILY SSF51735 7 257 1.24E-58 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_3633 54142c660bc81f97e6fa5ea3664d0c65 305 Pfam PF00106 short chain dehydrogenase 12 206 1.6E-39 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_1880 6b1a8eecc86a7ea09f87772efe6f037a 192 SUPERFAMILY SSF51679 2 155 4.42E-26 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 JDM601_1880 6b1a8eecc86a7ea09f87772efe6f037a 192 Gene3D G3DSA:3.20.20.30 1 190 1.3E-31 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 JDM601_1880 6b1a8eecc86a7ea09f87772efe6f037a 192 Pfam PF00296 Luciferase-like monooxygenase 1 152 9.3E-25 T 12-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 JDM601_1210 5634caf1cd83018e6cf472f38eff42d9 202 Pfam PF05076 Suppressor of fused protein (SUFU) 35 197 6.9E-34 T 12-10-2018 IPR020941 Suppressor of fused-like domain Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5610787|Reactome: R-HSA-5632684 JDM601_1439 b8c6826694c3e58d07f96d645f563d64 155 Pfam PF17174 Domain of unknown function (DUF5130) 14 149 5.1E-64 T 12-10-2018 IPR033437 Protein of unknown function DUF5130 JDM601_1439 b8c6826694c3e58d07f96d645f563d64 155 Gene3D G3DSA:3.10.310.50 39 153 3.4E-6 T 12-10-2018 JDM601_4166 b3a65203a8bdcd49d1cecf70b66691f4 157 SUPERFAMILY SSF89562 8 157 1.44E-44 T 12-10-2018 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily JDM601_4166 b3a65203a8bdcd49d1cecf70b66691f4 157 Pfam PF03737 Aldolase/RraA 8 156 1.3E-41 T 12-10-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein JDM601_4166 b3a65203a8bdcd49d1cecf70b66691f4 157 Gene3D G3DSA:3.50.30.40 3 157 7.4E-58 T 12-10-2018 JDM601_4166 b3a65203a8bdcd49d1cecf70b66691f4 157 TIGRFAM TIGR01935 NOT-MenG: RraA family 8 156 1.1E-62 T 12-10-2018 IPR010203 Regulator of ribonuclease activity A GO:0008428|GO:0051252 JDM601_2235 4a1a4ca78165a137d21195ef7caf2c3a 369 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 64 194 1.1E-60 T 12-10-2018 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 JDM601_2235 4a1a4ca78165a137d21195ef7caf2c3a 369 SUPERFAMILY SSF52540 35 315 5.43E-42 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_2235 4a1a4ca78165a137d21195ef7caf2c3a 369 Gene3D G3DSA:1.10.8.300 223 340 8.8E-33 T 12-10-2018 JDM601_2235 4a1a4ca78165a137d21195ef7caf2c3a 369 PIRSF PIRSF002849 17 345 1.4E-133 T 12-10-2018 JDM601_2235 4a1a4ca78165a137d21195ef7caf2c3a 369 Gene3D G3DSA:3.40.50.300 29 218 4.0E-48 T 12-10-2018 JDM601_0230 56bc471a6149a702ffc2273ea23d82b0 161 Pfam PF01613 Flavin reductase like domain 17 159 3.3E-27 T 12-10-2018 IPR002563 Flavin reductase like domain GO:0010181 JDM601_0230 56bc471a6149a702ffc2273ea23d82b0 161 Gene3D G3DSA:2.30.110.10 1 161 2.7E-40 T 12-10-2018 IPR012349 FMN-binding split barrel GO:0048037 JDM601_0230 56bc471a6149a702ffc2273ea23d82b0 161 SUPERFAMILY SSF50475 9 159 3.04E-37 T 12-10-2018 JDM601_0230 56bc471a6149a702ffc2273ea23d82b0 161 SMART SM00903 16 158 1.2E-40 T 12-10-2018 IPR002563 Flavin reductase like domain GO:0010181 JDM601_3109 e99e23cd66b8bdae34f5cc92b7ab8710 79 Gene3D G3DSA:1.10.1470.10 10 67 2.7E-5 T 12-10-2018 IPR036629 YjbJ superfamily JDM601_3109 e99e23cd66b8bdae34f5cc92b7ab8710 79 Pfam PF05532 CsbD-like 13 61 1.5E-12 T 12-10-2018 IPR008462 CsbD-like domain JDM601_3109 e99e23cd66b8bdae34f5cc92b7ab8710 79 SUPERFAMILY SSF69047 12 64 4.45E-9 T 12-10-2018 IPR036629 YjbJ superfamily JDM601_0071 92653c2ff42ad64d014286fd616ba7e2 486 SUPERFAMILY SSF53649 41 313 1.14E-24 T 12-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 JDM601_0071 92653c2ff42ad64d014286fd616ba7e2 486 Pfam PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase 44 259 7.1E-15 T 12-10-2018 IPR002591 Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase GO:0003824 JDM601_0071 92653c2ff42ad64d014286fd616ba7e2 486 Gene3D G3DSA:3.40.720.10 163 333 6.6E-20 T 12-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 JDM601_0071 92653c2ff42ad64d014286fd616ba7e2 486 Gene3D G3DSA:3.40.720.10 38 125 1.4E-11 T 12-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 JDM601_0204 90575e0399d2822fa84a05938c4127ec 408 Pfam PF11271 Protein of unknown function (DUF3068) 2 328 4.6E-90 T 12-10-2018 IPR021424 Porin PorA JDM601_3186 ada068144f9ccb6ef7f02fb574a5db7e 548 SUPERFAMILY SSF140459 5 177 9.94E-59 T 12-10-2018 JDM601_3186 ada068144f9ccb6ef7f02fb574a5db7e 548 Pfam PF00823 PPE family 8 164 9.2E-59 T 12-10-2018 IPR000030 PPE family JDM601_3186 ada068144f9ccb6ef7f02fb574a5db7e 548 Gene3D G3DSA:1.20.1260.20 5 178 2.2E-58 T 12-10-2018 IPR038332 PPE superfamily JDM601_2031 02c3d6f929e07275a7dc6fc07104521d 191 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 19 32 8.3E-5 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_2031 02c3d6f929e07275a7dc6fc07104521d 191 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 40 63 8.3E-5 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_2031 02c3d6f929e07275a7dc6fc07104521d 191 Pfam PF00440 Bacterial regulatory proteins, tetR family 19 65 2.7E-10 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_2031 02c3d6f929e07275a7dc6fc07104521d 191 SUPERFAMILY SSF48498 81 180 4.89E-18 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily JDM601_2031 02c3d6f929e07275a7dc6fc07104521d 191 Gene3D G3DSA:1.10.357.10 4 191 7.4E-48 T 12-10-2018 JDM601_2031 02c3d6f929e07275a7dc6fc07104521d 191 Pfam PF13305 WHG domain 87 166 2.3E-17 T 12-10-2018 IPR025996 WHG domain JDM601_2031 02c3d6f929e07275a7dc6fc07104521d 191 SUPERFAMILY SSF46689 8 80 6.67E-15 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JDM601_3642 cc69a50f5473da944ed36c77b106c061 626 Pfam PF00005 ABC transporter 381 530 1.7E-29 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JDM601_3642 cc69a50f5473da944ed36c77b106c061 626 SMART SM00382 390 578 2.3E-15 T 12-10-2018 IPR003593 AAA+ ATPase domain JDM601_3642 cc69a50f5473da944ed36c77b106c061 626 Gene3D G3DSA:3.40.50.300 358 609 4.2E-80 T 12-10-2018 JDM601_3642 cc69a50f5473da944ed36c77b106c061 626 Pfam PF00664 ABC transporter transmembrane region 19 319 1.3E-21 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 JDM601_3642 cc69a50f5473da944ed36c77b106c061 626 SUPERFAMILY SSF90123 9 329 4.45E-40 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JDM601_3642 cc69a50f5473da944ed36c77b106c061 626 SUPERFAMILY SSF52540 354 600 7.5E-68 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_3642 cc69a50f5473da944ed36c77b106c061 626 Gene3D G3DSA:1.20.1560.10 3 347 8.9E-41 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 JDM601_0689 1d5a227d805e641afe6d62e013be5499 237 Pfam PF08223 PaaX-like protein C-terminal domain 186 226 2.9E-6 T 12-10-2018 IPR013225 PaaX-like, C-terminal JDM601_0689 1d5a227d805e641afe6d62e013be5499 237 Gene3D G3DSA:1.20.58.1460 158 237 1.4E-29 T 12-10-2018 JDM601_0689 1d5a227d805e641afe6d62e013be5499 237 Gene3D G3DSA:3.30.70.2650 76 157 2.7E-29 T 12-10-2018 JDM601_0689 1d5a227d805e641afe6d62e013be5499 237 Gene3D G3DSA:1.10.10.10 1 74 5.0E-33 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JDM601_0689 1d5a227d805e641afe6d62e013be5499 237 Pfam PF07848 PaaX-like protein 3 63 7.5E-15 T 12-10-2018 IPR012906 PaaX-like, N-terminal JDM601_2780 a3eae4fd275830d6e182bd4b2b8c115b 324 Pfam PF00268 Ribonucleotide reductase, small chain 14 285 9.0E-90 T 12-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 JDM601_2780 a3eae4fd275830d6e182bd4b2b8c115b 324 Gene3D G3DSA:1.10.620.20 1 296 6.8E-119 T 12-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 JDM601_2780 a3eae4fd275830d6e182bd4b2b8c115b 324 ProSitePatterns PS00368 Ribonucleotide reductase small subunit signature. 102 118 - T 12-10-2018 IPR030475 Ribonucleotide reductase small subunit, acitve site KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 JDM601_2780 a3eae4fd275830d6e182bd4b2b8c115b 324 SUPERFAMILY SSF47240 10 324 1.42E-107 T 12-10-2018 IPR009078 Ferritin-like superfamily JDM601_2780 a3eae4fd275830d6e182bd4b2b8c115b 324 PIRSF PIRSF000355 2 321 1.1E-80 T 12-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 JDM601_2780 a3eae4fd275830d6e182bd4b2b8c115b 324 TIGRFAM TIGR04171 RNR_1b_NrdF: ribonucleoside-diphosphate reductase, class 1b, beta subunit 12 324 2.9E-146 T 12-10-2018 IPR026494 Ribonucleoside reductase subunit beta, NrdF GO:0005971|GO:0009263 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 JDM601_1594 6744c6f5703412af71107d8cb4e35f44 142 Hamap MF_00265 tRNA(fMet)-specific endonuclease VapC [vapC]. 1 134 11.068 T 12-10-2018 IPR022907 VapC family GO:0004540 JDM601_1594 6744c6f5703412af71107d8cb4e35f44 142 Pfam PF01850 PIN domain 1 125 6.1E-12 T 12-10-2018 IPR002716 PIN domain JDM601_1594 6744c6f5703412af71107d8cb4e35f44 142 Gene3D G3DSA:3.40.50.1010 1 128 3.2E-16 T 12-10-2018 JDM601_1594 6744c6f5703412af71107d8cb4e35f44 142 SUPERFAMILY SSF88723 1 130 6.17E-16 T 12-10-2018 IPR029060 PIN-like domain superfamily JDM601_2904 f0ddf9fab26ba904ac8063e14cc89ef9 376 SUPERFAMILY SSF48498 258 337 2.49E-5 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily JDM601_2904 f0ddf9fab26ba904ac8063e14cc89ef9 376 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 209 232 1.4E-7 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_2904 f0ddf9fab26ba904ac8063e14cc89ef9 376 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 188 201 1.4E-7 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_2904 f0ddf9fab26ba904ac8063e14cc89ef9 376 Gene3D G3DSA:1.10.10.60 178 228 3.8E-15 T 12-10-2018 JDM601_2904 f0ddf9fab26ba904ac8063e14cc89ef9 376 SUPERFAMILY SSF46689 179 259 8.98E-18 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JDM601_2904 f0ddf9fab26ba904ac8063e14cc89ef9 376 SUPERFAMILY SSF46689 2 41 2.05E-6 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JDM601_2904 f0ddf9fab26ba904ac8063e14cc89ef9 376 Gene3D G3DSA:1.10.357.10 26 162 6.3E-16 T 12-10-2018 JDM601_2904 f0ddf9fab26ba904ac8063e14cc89ef9 376 Gene3D G3DSA:1.10.357.10 229 372 4.0E-27 T 12-10-2018 JDM601_2904 f0ddf9fab26ba904ac8063e14cc89ef9 376 Gene3D G3DSA:1.10.10.60 1 25 3.5E-5 T 12-10-2018 JDM601_2904 f0ddf9fab26ba904ac8063e14cc89ef9 376 Pfam PF00440 Bacterial regulatory proteins, tetR family 2 28 9.1E-6 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_2904 f0ddf9fab26ba904ac8063e14cc89ef9 376 Pfam PF00440 Bacterial regulatory proteins, tetR family 188 231 9.2E-16 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_4311 1416f136387d327ab4119818fd213e0d 817 Gene3D G3DSA:3.40.710.10 359 739 7.8E-145 T 12-10-2018 JDM601_4311 1416f136387d327ab4119818fd213e0d 817 SUPERFAMILY SSF56601 309 727 1.99E-89 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like JDM601_4311 1416f136387d327ab4119818fd213e0d 817 Gene3D G3DSA:1.10.3810.10 154 348 2.3E-60 T 12-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 JDM601_4311 1416f136387d327ab4119818fd213e0d 817 SUPERFAMILY SSF53955 136 343 3.09E-63 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily JDM601_4311 1416f136387d327ab4119818fd213e0d 817 Pfam PF00912 Transglycosylase 151 327 3.2E-55 T 12-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 JDM601_4311 1416f136387d327ab4119818fd213e0d 817 Pfam PF00905 Penicillin binding protein transpeptidase domain 421 687 1.5E-27 T 12-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 JDM601_0808 61ff3efd122ab554241ef5970f97ebba 258 Pfam PF11268 Protein of unknown function (DUF3071) 1 174 5.6E-58 T 12-10-2018 IPR021421 Protein of unknown function DUF3071 JDM601_2942 1bb44e344d0fd2e6aa9a3ea19fdd9c77 244 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 137 165 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 JDM601_2942 1bb44e344d0fd2e6aa9a3ea19fdd9c77 244 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 10 241 2.3E-59 T 12-10-2018 JDM601_2942 1bb44e344d0fd2e6aa9a3ea19fdd9c77 244 SUPERFAMILY SSF51735 5 242 2.3E-75 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_2942 1bb44e344d0fd2e6aa9a3ea19fdd9c77 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 76 87 3.4E-8 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2942 1bb44e344d0fd2e6aa9a3ea19fdd9c77 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 130 138 3.4E-8 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2942 1bb44e344d0fd2e6aa9a3ea19fdd9c77 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 150 169 3.4E-8 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2942 1bb44e344d0fd2e6aa9a3ea19fdd9c77 244 Gene3D G3DSA:3.40.50.720 1 243 1.1E-77 T 12-10-2018 JDM601_2942 1bb44e344d0fd2e6aa9a3ea19fdd9c77 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 3.6E-38 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2942 1bb44e344d0fd2e6aa9a3ea19fdd9c77 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 188 3.6E-38 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2942 1bb44e344d0fd2e6aa9a3ea19fdd9c77 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 204 224 3.6E-38 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2942 1bb44e344d0fd2e6aa9a3ea19fdd9c77 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 76 87 3.6E-38 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2942 1bb44e344d0fd2e6aa9a3ea19fdd9c77 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 124 140 3.6E-38 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2942 1bb44e344d0fd2e6aa9a3ea19fdd9c77 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 150 169 3.6E-38 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_3924 9e4a20757065955929f2060f34da0afd 421 Pfam PF12484 Polymorphic PE/PPE proteins C terminal 281 351 2.3E-7 T 12-10-2018 IPR022171 PPE family, C-terminal JDM601_3924 9e4a20757065955929f2060f34da0afd 421 SUPERFAMILY SSF140459 2 171 7.06E-61 T 12-10-2018 JDM601_3924 9e4a20757065955929f2060f34da0afd 421 Pfam PF09851 Short C-terminal domain 389 413 3.2E-6 T 12-10-2018 IPR018649 SHOCT domain JDM601_3924 9e4a20757065955929f2060f34da0afd 421 Gene3D G3DSA:1.20.1260.20 1 173 1.5E-66 T 12-10-2018 IPR038332 PPE superfamily JDM601_3924 9e4a20757065955929f2060f34da0afd 421 Pfam PF00823 PPE family 5 161 5.2E-61 T 12-10-2018 IPR000030 PPE family JDM601_2532 d6c7fddbc5800959038855f92c9fe271 386 Gene3D G3DSA:1.20.1260.20 1 174 1.2E-66 T 12-10-2018 IPR038332 PPE superfamily JDM601_2532 d6c7fddbc5800959038855f92c9fe271 386 Pfam PF00823 PPE family 5 161 6.9E-61 T 12-10-2018 IPR000030 PPE family JDM601_2532 d6c7fddbc5800959038855f92c9fe271 386 Pfam PF12484 Polymorphic PE/PPE proteins C terminal 294 363 1.5E-13 T 12-10-2018 IPR022171 PPE family, C-terminal JDM601_2532 d6c7fddbc5800959038855f92c9fe271 386 SUPERFAMILY SSF140459 2 173 6.54E-62 T 12-10-2018 JDM601_3199 fe251489aaf470ac40185aca61189235 148 Gene3D G3DSA:3.30.450.30 16 140 1.8E-38 T 12-10-2018 JDM601_3199 fe251489aaf470ac40185aca61189235 148 Pfam PF03259 Roadblock/LC7 domain 18 108 1.4E-23 T 12-10-2018 IPR004942 Roadblock/LAMTOR2 domain JDM601_3199 fe251489aaf470ac40185aca61189235 148 SUPERFAMILY SSF103196 16 138 1.43E-32 T 12-10-2018 JDM601_3199 fe251489aaf470ac40185aca61189235 148 SMART SM00960 19 109 1.6E-30 T 12-10-2018 IPR004942 Roadblock/LAMTOR2 domain JDM601_3720 053350fe48430bdba20f7cd093726b57 318 Gene3D G3DSA:1.10.540.10 2 116 8.6E-20 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 JDM601_3720 053350fe48430bdba20f7cd093726b57 318 SUPERFAMILY SSF56645 4 129 3.1E-15 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 JDM601_3720 053350fe48430bdba20f7cd093726b57 318 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 189 299 7.5E-22 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 JDM601_3720 053350fe48430bdba20f7cd093726b57 318 SUPERFAMILY SSF47203 185 313 2.39E-31 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 JDM601_3720 053350fe48430bdba20f7cd093726b57 318 Gene3D G3DSA:1.20.140.10 185 318 3.2E-30 T 12-10-2018 JDM601_3720 053350fe48430bdba20f7cd093726b57 318 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 4 99 3.6E-13 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 JDM601_0206 5248ef935c8e24b56d345844b828be5c 442 Pfam PF09995 Uncharacterized protein conserved in bacteria (DUF2236) 147 379 4.7E-21 T 12-10-2018 IPR018713 Domain of unknown function DUF2236 JDM601_1143 1b3c5746b5da4d58b0907722afef62fb 193 Gene3D G3DSA:1.10.340.30 18 140 7.2E-9 T 12-10-2018 JDM601_1143 1b3c5746b5da4d58b0907722afef62fb 193 TIGRFAM TIGR03252 TIGR03252: uncharacterized HhH-GPD family protein 4 190 3.7E-92 T 12-10-2018 IPR017658 Conserved hypothetical protein CHP03252, HhH-GPD JDM601_1143 1b3c5746b5da4d58b0907722afef62fb 193 SUPERFAMILY SSF48150 18 146 1.05E-15 T 12-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 JDM601_1143 1b3c5746b5da4d58b0907722afef62fb 193 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 25 189 2.1E-20 T 12-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 JDM601_2007 95dab65e80125a799f00cdc4c603c945 925 Gene3D G3DSA:1.20.1640.10 141 339 2.2E-5 T 12-10-2018 JDM601_2007 95dab65e80125a799f00cdc4c603c945 925 TIGRFAM TIGR00833 actII: transport protein 5 913 4.8E-290 T 12-10-2018 IPR004707 Membrane transport protein MmpL family GO:0016021 JDM601_2007 95dab65e80125a799f00cdc4c603c945 925 Pfam PF03176 MMPL family 38 366 3.7E-93 T 12-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 JDM601_2007 95dab65e80125a799f00cdc4c603c945 925 Pfam PF03176 MMPL family 589 913 1.3E-91 T 12-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 JDM601_2007 95dab65e80125a799f00cdc4c603c945 925 SUPERFAMILY SSF82866 136 334 2.88E-23 T 12-10-2018 JDM601_2007 95dab65e80125a799f00cdc4c603c945 925 SUPERFAMILY SSF82866 688 913 5.1E-29 T 12-10-2018 JDM601_0766 459e96a9f85e1c15fe1b30b5350c9ba8 78 Pfam PF12728 Helix-turn-helix domain 19 76 1.8E-7 T 12-10-2018 JDM601_0766 459e96a9f85e1c15fe1b30b5350c9ba8 78 SUPERFAMILY SSF46955 19 75 3.11E-6 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily JDM601_0208 5c44f9e1950cc7ff482c00a3c6ad3bed 442 Pfam PF09995 Uncharacterized protein conserved in bacteria (DUF2236) 149 322 8.9E-22 T 12-10-2018 IPR018713 Domain of unknown function DUF2236 JDM601_0709 173fc926ecd9879b27c6ceb1487104c7 275 Gene3D G3DSA:3.90.226.10 20 266 1.3E-57 T 12-10-2018 JDM601_0709 173fc926ecd9879b27c6ceb1487104c7 275 Pfam PF00378 Enoyl-CoA hydratase/isomerase 27 264 6.6E-43 T 12-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 JDM601_0709 173fc926ecd9879b27c6ceb1487104c7 275 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 116 136 - T 12-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 JDM601_0709 173fc926ecd9879b27c6ceb1487104c7 275 SUPERFAMILY SSF52096 18 264 3.64E-61 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily JDM601_1661 90e9d7afab79812b388748229cc2e7ae 277 Pfam PF02104 SURF1 family 23 226 3.5E-29 T 12-10-2018 IPR002994 Surfeit locus 1/Shy1 GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 JDM601_2000 8eade4935c62e3e87874b4da99e8a8ac 325 Gene3D G3DSA:3.40.50.720 1 325 2.0E-62 T 12-10-2018 JDM601_2000 8eade4935c62e3e87874b4da99e8a8ac 325 SUPERFAMILY SSF51735 1 320 1.53E-48 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_2000 8eade4935c62e3e87874b4da99e8a8ac 325 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 228 4.4E-17 T 12-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 JDM601_3902 9e3baa7d174bf84395233b17fe361415 339 Gene3D G3DSA:3.90.180.10 16 325 9.1E-68 T 12-10-2018 JDM601_3902 9e3baa7d174bf84395233b17fe361415 339 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 104 1.2E-10 T 12-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 JDM601_3902 9e3baa7d174bf84395233b17fe361415 339 Pfam PF00107 Zinc-binding dehydrogenase 179 300 1.2E-11 T 12-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 JDM601_3902 9e3baa7d174bf84395233b17fe361415 339 SUPERFAMILY SSF50129 2 178 1.67E-33 T 12-10-2018 IPR011032 GroES-like superfamily JDM601_3902 9e3baa7d174bf84395233b17fe361415 339 SUPERFAMILY SSF51735 142 305 2.99E-30 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_3902 9e3baa7d174bf84395233b17fe361415 339 Gene3D G3DSA:3.40.50.720 156 285 9.1E-68 T 12-10-2018 JDM601_0523 a670f137e3aa4c5039b79de06a5e7547 200 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 5 189 1.1E-39 T 12-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 JDM601_0523 a670f137e3aa4c5039b79de06a5e7547 200 Gene3D G3DSA:3.40.50.1240 1 195 7.2E-36 T 12-10-2018 IPR029033 Histidine phosphatase superfamily JDM601_0523 a670f137e3aa4c5039b79de06a5e7547 200 SUPERFAMILY SSF53254 3 195 7.95E-42 T 12-10-2018 IPR029033 Histidine phosphatase superfamily JDM601_0523 a670f137e3aa4c5039b79de06a5e7547 200 SMART SM00855 4 156 7.3E-18 T 12-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 JDM601_3097 437c6ee083dfb7f9cf3e3382108583e7 225 Pfam PF01083 Cutinase 29 213 8.3E-40 T 12-10-2018 IPR000675 Cutinase/acetylxylan esterase GO:0016787 JDM601_3097 437c6ee083dfb7f9cf3e3382108583e7 225 Gene3D G3DSA:3.40.50.1820 21 217 3.3E-47 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_3097 437c6ee083dfb7f9cf3e3382108583e7 225 SMART SM01110 27 214 5.9E-78 T 12-10-2018 IPR000675 Cutinase/acetylxylan esterase GO:0016787 JDM601_3097 437c6ee083dfb7f9cf3e3382108583e7 225 SUPERFAMILY SSF53474 28 213 2.66E-34 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_2197 b09dad2081f38abd208200cdf2f173d3 277 Pfam PF08241 Methyltransferase domain 92 186 1.2E-21 T 12-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 JDM601_2197 b09dad2081f38abd208200cdf2f173d3 277 SUPERFAMILY SSF53335 46 230 9.73E-35 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JDM601_2197 b09dad2081f38abd208200cdf2f173d3 277 Gene3D G3DSA:3.40.50.150 49 248 4.9E-34 T 12-10-2018 JDM601_3536 fc7c2bb542f09eff7aabc4d44c6adfc2 304 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 99 302 4.1E-26 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 JDM601_3536 fc7c2bb542f09eff7aabc4d44c6adfc2 304 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 26 299 5.2E-81 T 12-10-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 JDM601_3536 fc7c2bb542f09eff7aabc4d44c6adfc2 304 SUPERFAMILY SSF161098 35 292 6.02E-37 T 12-10-2018 IPR035906 MetI-like superfamily JDM601_3536 fc7c2bb542f09eff7aabc4d44c6adfc2 304 Gene3D G3DSA:1.10.3720.10 79 300 1.8E-29 T 12-10-2018 IPR035906 MetI-like superfamily JDM601_1657 c50986992f0242f5c07cd1b14e5a2f2a 140 Pfam PF11253 Protein of unknown function (DUF3052) 11 134 1.8E-55 T 12-10-2018 IPR021412 Protein of unknown function DUF3052 JDM601_1747 9300b373348c9828dbaa53be6b0e4b02 235 SUPERFAMILY SSF64438 4 235 1.1E-75 T 12-10-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic JDM601_1747 9300b373348c9828dbaa53be6b0e4b02 235 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 15 234 5.4E-64 T 12-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase JDM601_1747 9300b373348c9828dbaa53be6b0e4b02 235 Gene3D G3DSA:3.60.140.10 2 235 3.2E-78 T 12-10-2018 IPR038371 Multi-copper polyphenol oxidoreductase superfamily JDM601_1747 9300b373348c9828dbaa53be6b0e4b02 235 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 10 233 2.0E-72 T 12-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase JDM601_1763 4656ee47039499bde5e5c2c3d660f6e4 209 Pfam PF13490 Putative zinc-finger 5 30 1.7E-6 T 12-10-2018 IPR027383 Putative zinc-finger JDM601_1763 4656ee47039499bde5e5c2c3d660f6e4 209 Gene3D G3DSA:1.10.10.1320 1 58 6.7E-22 T 12-10-2018 JDM601_2604 617adeec82bf1874f96cfcc2eca72ba4 317 Pfam PF00146 NADH dehydrogenase 12 305 1.1E-37 T 12-10-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 JDM601_0547 aee457834907a2dfb8c7f42bf35df929 222 Gene3D G3DSA:3.40.1000.70 30 219 1.4E-55 T 12-10-2018 IPR038232 PknH-like extracellular domain superfamily KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1 JDM601_0547 aee457834907a2dfb8c7f42bf35df929 222 Pfam PF14032 PknH-like extracellular domain 34 215 3.9E-40 T 12-10-2018 IPR026954 PknH-like extracellular domain KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1 JDM601_1597 ad51880a7a43d75b29d5e8f0e39d237c 403 Pfam PF12484 Polymorphic PE/PPE proteins C terminal 306 399 7.8E-10 T 12-10-2018 IPR022171 PPE family, C-terminal JDM601_1597 ad51880a7a43d75b29d5e8f0e39d237c 403 Pfam PF00823 PPE family 1 157 7.8E-55 T 12-10-2018 IPR000030 PPE family JDM601_1597 ad51880a7a43d75b29d5e8f0e39d237c 403 Gene3D G3DSA:1.20.1260.20 1 170 1.0E-57 T 12-10-2018 IPR038332 PPE superfamily JDM601_1597 ad51880a7a43d75b29d5e8f0e39d237c 403 SUPERFAMILY SSF140459 1 170 9.94E-55 T 12-10-2018 JDM601_3749 e7661cddb5ae78422ed03873071d526f 128 SUPERFAMILY SSF54637 3 126 2.92E-18 T 12-10-2018 IPR029069 HotDog domain superfamily JDM601_3749 e7661cddb5ae78422ed03873071d526f 128 Pfam PF13452 N-terminal half of MaoC dehydratase 2 116 1.1E-18 T 12-10-2018 IPR039569 N-terminal of MaoC-like dehydratase Reactome: R-HSA-193368|Reactome: R-HSA-2046106|Reactome: R-HSA-389887|Reactome: R-HSA-390247|Reactome: R-HSA-9033241|Reactome: R-HSA-9033500 JDM601_3749 e7661cddb5ae78422ed03873071d526f 128 Gene3D G3DSA:3.10.129.10 1 128 1.2E-23 T 12-10-2018 JDM601_2664 5e98019660a603f32eefb643ae66d422 244 Pfam PF09347 Domain of unknown function (DUF1989) 41 187 3.4E-29 T 12-10-2018 IPR018959 Protein of unknown function DUF1989 JDM601_2489 1701798b6fb84504d9d1bf6239461647 113 Pfam PF17240 Family of unknown function (DUF5313) 1 103 1.2E-36 T 12-10-2018 IPR035197 Protein of unknown function DUF5313 JDM601_3034 5d6c431a09ab6a180e5c264a31854e4c 169 Pfam PF03703 Bacterial PH domain 82 156 1.7E-17 T 12-10-2018 IPR005182 Domain of unknown function DUF304 JDM601_2249 e501b797b6bc09c7580440529a083f71 113 Gene3D G3DSA:3.30.300.130 4 108 4.0E-28 T 12-10-2018 IPR034904 Fe-S cluster assembly domain superfamily JDM601_2249 e501b797b6bc09c7580440529a083f71 113 SUPERFAMILY SSF117916 11 107 1.57E-23 T 12-10-2018 IPR034904 Fe-S cluster assembly domain superfamily JDM601_2249 e501b797b6bc09c7580440529a083f71 113 Pfam PF01883 Iron-sulfur cluster assembly protein 11 73 2.3E-14 T 12-10-2018 IPR002744 MIP18 family-like JDM601_3739 8e153a40cbe778725bc47ed4fcf2ec45 87 Pfam PF01796 DUF35 OB-fold domain, acyl-CoA-associated 5 68 7.1E-17 T 12-10-2018 IPR002878 Domain of unknown function DUF35, OB-fold, C-terminal JDM601_3739 8e153a40cbe778725bc47ed4fcf2ec45 87 SUPERFAMILY SSF50249 2 75 3.77E-15 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold JDM601_2525 c1a59e6098004d2ee37062605c345680 154 SUPERFAMILY SSF48452 104 153 3.25E-5 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 JDM601_4194 231b7380ff3bc7a519095871114ac39a 117 Pfam PF05305 Protein of unknown function (DUF732) 9 113 1.1E-22 T 12-10-2018 IPR007969 Domain of unknown function DUF732 JDM601_1080 72ce09a3a6def5441b00f15d69e12320 504 Gene3D G3DSA:3.30.1330.120 285 431 3.2E-62 T 12-10-2018 JDM601_1080 72ce09a3a6def5441b00f15d69e12320 504 Pfam PF03972 MmgE/PrpD family 22 471 5.2E-125 T 12-10-2018 IPR005656 MmgE/PrpD GO:0016829 JDM601_1080 72ce09a3a6def5441b00f15d69e12320 504 SUPERFAMILY SSF103378 22 480 3.53E-121 T 12-10-2018 IPR036148 MmgE/PrpD superfamily GO:0016829 JDM601_1080 72ce09a3a6def5441b00f15d69e12320 504 Gene3D G3DSA:1.10.4100.10 49 466 3.2E-62 T 12-10-2018 JDM601_3721 e846027ad1ba378030b7ddff3f57ba5b 328 Pfam PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family 2 288 3.2E-43 T 12-10-2018 IPR029132 Choloylglycine hydrolase/NAAA C-terminal JDM601_3721 e846027ad1ba378030b7ddff3f57ba5b 328 Gene3D G3DSA:3.60.60.10 2 328 3.0E-119 T 12-10-2018 JDM601_3721 e846027ad1ba378030b7ddff3f57ba5b 328 SUPERFAMILY SSF56235 2 297 3.47E-93 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal JDM601_3763 91a11e486704880d33dbcd1423d222d7 596 Pfam PF07287 Acyclic terpene utilisation family protein AtuA 12 361 1.6E-123 T 12-10-2018 IPR010839 Acyclic terpene utilisation JDM601_3112 02647b532402d5b8adb30b2e19d28e85 104 TIGRFAM TIGR04529 MTB_hemophore: hemophore-related protein, Rv0203/Rv1174c family 33 103 2.1E-17 T 12-10-2018 IPR032407 Haemophore, haem-binding GO:0020037 JDM601_1762 479ac9e4c06f83ed58e67c16fc38d51e 338 Pfam PF01494 FAD binding domain 6 163 1.6E-10 T 12-10-2018 IPR002938 FAD-binding domain GO:0071949 JDM601_1762 479ac9e4c06f83ed58e67c16fc38d51e 338 Gene3D G3DSA:3.50.50.60 3 321 2.1E-40 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_1762 479ac9e4c06f83ed58e67c16fc38d51e 338 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 134 149 1.5E-16 T 12-10-2018 JDM601_1762 479ac9e4c06f83ed58e67c16fc38d51e 338 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 7 29 1.5E-16 T 12-10-2018 JDM601_1762 479ac9e4c06f83ed58e67c16fc38d51e 338 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 244 259 1.5E-16 T 12-10-2018 JDM601_1762 479ac9e4c06f83ed58e67c16fc38d51e 338 SUPERFAMILY SSF51905 6 308 8.03E-37 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_0469 a6eb6fe293362d54914ebc7ead90df07 274 SUPERFAMILY SSF56317 1 261 4.45E-61 T 12-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily JDM601_0469 a6eb6fe293362d54914ebc7ead90df07 274 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 138 158 - T 12-10-2018 IPR001110 Uncharacterised protein family UPF0012, conserved site JDM601_0469 a6eb6fe293362d54914ebc7ead90df07 274 Gene3D G3DSA:3.60.110.10 1 269 1.3E-66 T 12-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily JDM601_0469 a6eb6fe293362d54914ebc7ead90df07 274 Pfam PF00795 Carbon-nitrogen hydrolase 2 253 1.3E-35 T 12-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 JDM601_4019 5ba450137f86095229174077b15f64ba 198 SUPERFAMILY SSF46689 2 61 1.54E-9 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JDM601_4019 5ba450137f86095229174077b15f64ba 198 Gene3D G3DSA:1.10.357.10 1 198 1.3E-56 T 12-10-2018 JDM601_4019 5ba450137f86095229174077b15f64ba 198 Pfam PF00440 Bacterial regulatory proteins, tetR family 1 44 6.0E-6 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_3298 5cba0523893a421109a730e16b4a94ac 168 SMART SM00347 50 151 7.8E-20 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 JDM601_3298 5cba0523893a421109a730e16b4a94ac 168 SUPERFAMILY SSF46785 33 165 1.96E-24 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JDM601_3298 5cba0523893a421109a730e16b4a94ac 168 Pfam PF01047 MarR family 60 116 9.2E-10 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 JDM601_3298 5cba0523893a421109a730e16b4a94ac 168 Gene3D G3DSA:1.10.10.10 27 168 3.1E-30 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JDM601_0846 86df9016fc876572aaa2276cda9fd15a 250 SUPERFAMILY SSF51735 1 202 3.19E-27 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_0846 86df9016fc876572aaa2276cda9fd15a 250 Gene3D G3DSA:3.40.50.720 2 244 6.6E-27 T 12-10-2018 JDM601_0846 86df9016fc876572aaa2276cda9fd15a 250 Pfam PF13460 NAD(P)H-binding 7 171 3.0E-13 T 12-10-2018 IPR016040 NAD(P)-binding domain JDM601_0423 8b268c047202675d2d3a5c7f4584b27c 161 Pfam PF03703 Bacterial PH domain 71 149 3.2E-17 T 12-10-2018 IPR005182 Domain of unknown function DUF304 JDM601_2830 acee3ed24743891385fa2e4fcbadad2f 416 SUPERFAMILY SSF56112 133 319 1.46E-14 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily JDM601_2830 acee3ed24743891385fa2e4fcbadad2f 416 Pfam PF00069 Protein kinase domain 136 242 3.1E-7 T 12-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 JDM601_2830 acee3ed24743891385fa2e4fcbadad2f 416 Gene3D G3DSA:1.10.510.10 127 320 6.8E-15 T 12-10-2018 JDM601_3738 ce7cf4a4db47ed91c2b50dc482aefce1 393 Gene3D G3DSA:3.40.47.10 1 392 1.6E-79 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 JDM601_3738 ce7cf4a4db47ed91c2b50dc482aefce1 393 SUPERFAMILY SSF53901 250 389 1.99E-15 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 JDM601_3738 ce7cf4a4db47ed91c2b50dc482aefce1 393 PIRSF PIRSF000429 2 70 0.99 T 12-10-2018 IPR002155 Thiolase GO:0016747 JDM601_3738 ce7cf4a4db47ed91c2b50dc482aefce1 393 PIRSF PIRSF000429 92 392 3.7E-10 T 12-10-2018 IPR002155 Thiolase GO:0016747 JDM601_3738 ce7cf4a4db47ed91c2b50dc482aefce1 393 SUPERFAMILY SSF53901 7 236 6.18E-13 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 JDM601_1256 3d41e9162b87c140c7aa849d529506c2 118 Gene3D G3DSA:2.30.30.110 20 116 6.3E-9 T 12-10-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor JDM601_1256 3d41e9162b87c140c7aa849d529506c2 118 SUPERFAMILY SSF50118 5 116 5.67E-11 T 12-10-2018 JDM601_1256 3d41e9162b87c140c7aa849d529506c2 118 Pfam PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system 6 113 1.7E-13 T 12-10-2018 IPR003477 mRNA interferase PemK-like GO:0003677 JDM601_0394 73bc76a71df490bf3aaf48c568100cec 276 SUPERFAMILY SSF53613 13 273 5.92E-73 T 12-10-2018 IPR029056 Ribokinase-like JDM601_0394 73bc76a71df490bf3aaf48c568100cec 276 Gene3D G3DSA:3.40.1190.20 8 276 1.8E-93 T 12-10-2018 IPR029056 Ribokinase-like JDM601_0394 73bc76a71df490bf3aaf48c568100cec 276 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 16 269 5.7E-86 T 12-10-2018 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 JDM601_0394 73bc76a71df490bf3aaf48c568100cec 276 Pfam PF08543 Phosphomethylpyrimidine kinase 23 268 1.3E-85 T 12-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 JDM601_0368 447d81a4ac42c8ab605b2368bca32dee 134 SUPERFAMILY SSF52821 5 133 4.53E-15 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily JDM601_0368 447d81a4ac42c8ab605b2368bca32dee 134 Gene3D G3DSA:3.40.250.10 1 134 1.0E-33 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily JDM601_0368 447d81a4ac42c8ab605b2368bca32dee 134 SMART SM00450 8 118 9.9E-4 T 12-10-2018 IPR001763 Rhodanese-like domain JDM601_1239 1370bc671e747885baba19a593665ccc 180 Pfam PF12079 Protein of unknown function (DUF3558) 19 177 5.1E-31 T 12-10-2018 IPR024520 Protein of unknown function DUF3558 JDM601_2093 7d92b8d05ee1ace89a1ababba264d3eb 276 Gene3D G3DSA:3.10.450.50 6 140 2.8E-34 T 12-10-2018 JDM601_2093 7d92b8d05ee1ace89a1ababba264d3eb 276 Pfam PF02136 Nuclear transport factor 2 (NTF2) domain 11 66 1.1E-6 T 12-10-2018 IPR002075 Nuclear transport factor 2 JDM601_2093 7d92b8d05ee1ace89a1ababba264d3eb 276 SUPERFAMILY SSF54427 7 111 2.54E-13 T 12-10-2018 IPR032710 NTF2-like domain superfamily JDM601_1928 68839311e64bb06f66b702298056a4fc 691 Pfam PF13531 Bacterial extracellular solute-binding protein 178 459 1.5E-13 T 12-10-2018 JDM601_1928 68839311e64bb06f66b702298056a4fc 691 Gene3D G3DSA:3.40.50.410 501 689 3.9E-13 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily JDM601_1928 68839311e64bb06f66b702298056a4fc 691 SMART SM00327 501 687 7.2E-6 T 12-10-2018 IPR002035 von Willebrand factor, type A JDM601_1928 68839311e64bb06f66b702298056a4fc 691 SUPERFAMILY SSF53300 504 675 2.72E-11 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily JDM601_1015 71b6197c1042875ad14fb18e4f7c5741 563 PIRSF PIRSF007542 2 563 3.1E-222 T 12-10-2018 IPR012037 Alpha/beta-hydrolase family JDM601_1015 71b6197c1042875ad14fb18e4f7c5741 563 Pfam PF10081 Alpha/beta-hydrolase family 266 553 2.2E-128 T 12-10-2018 IPR027787 Alpha/beta-hydrolase, catalytic domain JDM601_1015 71b6197c1042875ad14fb18e4f7c5741 563 Pfam PF15420 Alpha/beta-hydrolase family N-terminus 42 249 7.1E-71 T 12-10-2018 IPR027788 Alpha/beta-hydrolase, N-terminal domain JDM601_3423 371f694ef61bb8a116b1ab0814184b0d 60 Pfam PF04324 BFD-like [2Fe-2S] binding domain 2 50 5.1E-14 T 12-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain JDM601_3423 371f694ef61bb8a116b1ab0814184b0d 60 Gene3D G3DSA:1.10.10.1100 1 55 1.8E-18 T 12-10-2018 JDM601_2874 3765ef6bb6679c8b972ae8b6105e0964 350 Pfam PF00487 Fatty acid desaturase 65 330 1.2E-30 T 12-10-2018 IPR005804 Fatty acid desaturase domain GO:0006629 JDM601_2711 510d7d60f3522c6d335deb3673c19f08 248 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 121 149 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 JDM601_2711 510d7d60f3522c6d335deb3673c19f08 248 SUPERFAMILY SSF51735 3 236 3.51E-47 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_2711 510d7d60f3522c6d335deb3673c19f08 248 Gene3D G3DSA:3.40.50.720 1 244 7.6E-50 T 12-10-2018 JDM601_2711 510d7d60f3522c6d335deb3673c19f08 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 56 67 7.9E-5 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2711 510d7d60f3522c6d335deb3673c19f08 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 153 7.9E-5 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2711 510d7d60f3522c6d335deb3673c19f08 248 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 3 235 4.2E-36 T 12-10-2018 JDM601_2711 510d7d60f3522c6d335deb3673c19f08 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 171 1.9E-17 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2711 510d7d60f3522c6d335deb3673c19f08 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 108 124 1.9E-17 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2711 510d7d60f3522c6d335deb3673c19f08 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 134 153 1.9E-17 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2711 510d7d60f3522c6d335deb3673c19f08 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 199 219 1.9E-17 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2711 510d7d60f3522c6d335deb3673c19f08 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 56 67 1.9E-17 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_1255 4d56bb05661d670ff47765cf1f833780 115 Pfam PF08808 RES domain 19 70 5.8E-7 T 12-10-2018 IPR014914 RES domain JDM601_0688 a9f2a9026781c2c2c6affe93285a0a58 311 SUPERFAMILY SSF52096 8 277 3.65E-53 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily JDM601_0688 a9f2a9026781c2c2c6affe93285a0a58 311 Gene3D G3DSA:3.90.226.10 8 311 9.7E-115 T 12-10-2018 JDM601_0688 a9f2a9026781c2c2c6affe93285a0a58 311 Pfam PF00378 Enoyl-CoA hydratase/isomerase 22 97 1.6E-11 T 12-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 JDM601_0688 a9f2a9026781c2c2c6affe93285a0a58 311 Pfam PF00378 Enoyl-CoA hydratase/isomerase 124 272 2.1E-19 T 12-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 JDM601_1886 b985ae6d80f31d05931d45c218d838d4 207 Gene3D G3DSA:3.90.1720.10 1 112 6.8E-7 T 12-10-2018 JDM601_1886 b985ae6d80f31d05931d45c218d838d4 207 SUPERFAMILY SSF54001 3 99 5.4E-7 T 12-10-2018 IPR038765 Papain-like cysteine peptidase superfamily JDM601_1415 90df6486e418dc6aef3b4698b7c60567 227 Gene3D G3DSA:2.30.110.10 5 224 1.1E-71 T 12-10-2018 IPR012349 FMN-binding split barrel GO:0048037 JDM601_1415 90df6486e418dc6aef3b4698b7c60567 227 Pfam PF12900 Pyridoxamine 5'-phosphate oxidase 24 170 2.7E-42 T 12-10-2018 IPR024747 Pyridoxamine 5'-phosphate oxidase-related JDM601_1415 90df6486e418dc6aef3b4698b7c60567 227 SUPERFAMILY SSF50475 5 191 3.19E-56 T 12-10-2018 JDM601_0180 e20a14f1a82fd0f88aa24293859c3c23 408 PRINTS PR01228 Eggshell protein signature 161 172 1.8E-6 T 12-10-2018 JDM601_0180 e20a14f1a82fd0f88aa24293859c3c23 408 PRINTS PR01228 Eggshell protein signature 225 240 1.8E-6 T 12-10-2018 JDM601_0180 e20a14f1a82fd0f88aa24293859c3c23 408 PRINTS PR01228 Eggshell protein signature 251 261 1.8E-6 T 12-10-2018 JDM601_0180 e20a14f1a82fd0f88aa24293859c3c23 408 PRINTS PR01228 Eggshell protein signature 277 295 1.8E-6 T 12-10-2018 JDM601_2621 decb95d5c203a6e8d57621e5543424c3 463 SUPERFAMILY SSF53474 14 89 1.87E-5 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_2621 decb95d5c203a6e8d57621e5543424c3 463 Gene3D G3DSA:3.40.50.1820 1 141 1.3E-10 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_2621 decb95d5c203a6e8d57621e5543424c3 463 Pfam PF08237 PE-PPE domain 2 225 1.5E-61 T 12-10-2018 IPR013228 PE-PPE, C-terminal JDM601_2085 65cd65cda827a8db2f5ba01b26762cb1 279 Gene3D G3DSA:1.10.3720.10 6 265 9.4E-65 T 12-10-2018 IPR035906 MetI-like superfamily JDM601_2085 65cd65cda827a8db2f5ba01b26762cb1 279 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 94 270 5.7E-19 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 JDM601_2085 65cd65cda827a8db2f5ba01b26762cb1 279 SUPERFAMILY SSF161098 7 275 1.03E-72 T 12-10-2018 IPR035906 MetI-like superfamily JDM601_3038 bb361df10e4c9e70ac0746c8b7ba8499 301 TIGRFAM TIGR02778 ligD_pol: DNA ligase D, polymerase domain 5 254 3.8E-73 T 12-10-2018 IPR014145 DNA ligase D, polymerase domain JDM601_3038 bb361df10e4c9e70ac0746c8b7ba8499 301 Gene3D G3DSA:3.90.920.30 12 298 1.2E-91 T 12-10-2018 JDM601_1398 6a49b945b1564c10c7837313b72cbd8c 258 Gene3D G3DSA:2.60.40.2880 173 256 4.4E-10 T 12-10-2018 IPR038468 Transport accessory protein MmpS, soluble domain superfamily JDM601_1398 6a49b945b1564c10c7837313b72cbd8c 258 Pfam PF05423 Mycobacterium membrane protein 166 247 1.8E-8 T 12-10-2018 IPR008693 Transport accessory protein MmpS JDM601_1653 97080ff04f33f5df76b3a4159996a4ac 438 Pfam PF13556 PucR C-terminal helix-turn-helix domain 342 398 2.2E-20 T 12-10-2018 IPR025736 PucR C-terminal helix-turn-helix domain JDM601_1653 97080ff04f33f5df76b3a4159996a4ac 438 Gene3D G3DSA:1.10.10.2840 279 406 1.1E-40 T 12-10-2018 JDM601_2396 28b4efbed284ecedb923042dae22a243 190 SUPERFAMILY SSF54197 50 188 9.28E-37 T 12-10-2018 IPR036265 HIT-like superfamily JDM601_2396 28b4efbed284ecedb923042dae22a243 190 Gene3D G3DSA:3.30.428.10 9 190 4.1E-58 T 12-10-2018 IPR036265 HIT-like superfamily JDM601_2396 28b4efbed284ecedb923042dae22a243 190 Pfam PF01230 HIT domain 64 154 1.9E-14 T 12-10-2018 IPR001310 Histidine triad (HIT) protein JDM601_3035 aa74b64b817b7458bd7f9a5f67753cd5 221 Pfam PF04138 GtrA-like protein 27 157 1.4E-22 T 12-10-2018 IPR007267 GtrA-like protein GO:0000271|GO:0016021 JDM601_3245 0e7639521d8d5ef6274a0625e1a519b8 461 TIGRFAM TIGR01788 Glu-decarb-GAD: glutamate decarboxylase 16 444 5.4E-206 T 12-10-2018 IPR010107 Glutamate decarboxylase GO:0004351|GO:0006536|GO:0030170 KEGG: 00250+4.1.1.15|KEGG: 00410+4.1.1.15|KEGG: 00430+4.1.1.15|KEGG: 00650+4.1.1.15|MetaCyc: PWY-4321 JDM601_3245 0e7639521d8d5ef6274a0625e1a519b8 461 Gene3D G3DSA:3.90.1150.160 361 448 4.8E-29 T 12-10-2018 JDM601_3245 0e7639521d8d5ef6274a0625e1a519b8 461 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 42 379 1.8E-69 T 12-10-2018 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 JDM601_3245 0e7639521d8d5ef6274a0625e1a519b8 461 SUPERFAMILY SSF53383 11 442 1.25E-123 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase JDM601_3245 0e7639521d8d5ef6274a0625e1a519b8 461 Gene3D G3DSA:3.40.640.10 65 359 4.4E-81 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 JDM601_3946 a25cb2597346d4e2a583f000ac4f6f2d 238 Gene3D G3DSA:2.40.10.10 51 120 8.1E-13 T 12-10-2018 JDM601_3946 a25cb2597346d4e2a583f000ac4f6f2d 238 SUPERFAMILY SSF50494 47 210 2.54E-22 T 12-10-2018 IPR009003 Peptidase S1, PA clan JDM601_3946 a25cb2597346d4e2a583f000ac4f6f2d 238 Gene3D G3DSA:2.40.10.10 121 196 8.1E-13 T 12-10-2018 JDM601_3319 976c7db92635904e29a4a6552f8a70a3 61 Gene3D G3DSA:4.10.830.10 1 61 6.7E-32 T 12-10-2018 JDM601_3319 976c7db92635904e29a4a6552f8a70a3 61 SUPERFAMILY SSF57716 4 61 1.28E-21 T 12-10-2018 JDM601_3319 976c7db92635904e29a4a6552f8a70a3 61 ProSitePatterns PS00527 Ribosomal protein S14 signature. 23 45 - T 12-10-2018 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JDM601_3319 976c7db92635904e29a4a6552f8a70a3 61 Hamap MF_01364_B 30S ribosomal protein S14 type Z [rpsZ]. 1 61 25.894 T 12-10-2018 IPR023053 Ribosomal protein S14, type Z JDM601_3319 976c7db92635904e29a4a6552f8a70a3 61 Pfam PF00253 Ribosomal protein S14p/S29e 9 60 6.5E-25 T 12-10-2018 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JDM601_3560 f6266ec3863b4a281b64640aec25d894 221 Pfam PF08406 CbbQ/NirQ/NorQ C-terminal 133 217 6.5E-27 T 12-10-2018 IPR013615 CbbQ/NirQ/NorQ, C-terminal JDM601_3560 f6266ec3863b4a281b64640aec25d894 221 SUPERFAMILY SSF52540 2 155 7.97E-22 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_3560 f6266ec3863b4a281b64640aec25d894 221 Pfam PF07728 AAA domain (dynein-related subfamily) 2 120 4.5E-23 T 12-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 JDM601_3560 f6266ec3863b4a281b64640aec25d894 221 Gene3D G3DSA:3.40.50.300 1 138 2.9E-19 T 12-10-2018 JDM601_4168 7b06a8a87216ffb38bd1244c8102135b 482 Pfam PF13450 NAD(P)-binding Rossmann-like domain 2 49 8.4E-9 T 12-10-2018 JDM601_4168 7b06a8a87216ffb38bd1244c8102135b 482 Gene3D G3DSA:3.50.50.60 290 420 2.3E-7 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_4168 7b06a8a87216ffb38bd1244c8102135b 482 Pfam PF00743 Flavin-binding monooxygenase-like 73 205 1.2E-11 T 12-10-2018 IPR020946 Flavin monooxygenase-like GO:0004499|GO:0050660|GO:0050661|GO:0055114 JDM601_4168 7b06a8a87216ffb38bd1244c8102135b 482 Gene3D G3DSA:3.50.50.60 147 230 1.3E-12 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_4168 7b06a8a87216ffb38bd1244c8102135b 482 Gene3D G3DSA:3.50.50.60 1 146 1.8E-33 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_4168 7b06a8a87216ffb38bd1244c8102135b 482 SUPERFAMILY SSF51905 1 381 1.07E-51 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_0624 98c0b50919682910c1a812546586c9e8 154 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 84 128 4.3E-14 T 12-10-2018 IPR010093 SinI-like, DNA-binding domain GO:0003677 JDM601_0624 98c0b50919682910c1a812546586c9e8 154 Pfam PF12728 Helix-turn-helix domain 84 131 2.2E-10 T 12-10-2018 JDM601_0624 98c0b50919682910c1a812546586c9e8 154 Gene3D G3DSA:1.10.1660.10 79 131 1.2E-6 T 12-10-2018 JDM601_0952 98fbfc1098f08169bf1bfec8426680d8 348 Pfam PF12787 EcsC protein family 66 303 2.5E-25 T 12-10-2018 IPR024787 EcsC protein JDM601_1461 a1f3d86d59fc888c3199728dfaed310d 116 Pfam PF14017 Protein of unknown function (DUF4233) 15 116 1.6E-25 T 12-10-2018 IPR025327 Protein of unknown function DUF4233 JDM601_2530 ca6f2bc174ad2e5d524729f3c2be8dc0 303 PIRSF PIRSF007580 11 303 9.3E-133 T 12-10-2018 IPR016516 Uncharacterised conserved protein UCP07580 JDM601_2530 ca6f2bc174ad2e5d524729f3c2be8dc0 303 Pfam PF10118 Predicted metal-dependent hydrolase 25 283 2.3E-80 T 12-10-2018 IPR016516 Uncharacterised conserved protein UCP07580 JDM601_0916 e15ec9e2bed4d479efa38798a5556b37 532 Pfam PF00361 Proton-conducting membrane transporter 139 426 1.0E-59 T 12-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 JDM601_0916 e15ec9e2bed4d479efa38798a5556b37 532 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 246 270 7.4E-14 T 12-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 JDM601_0916 e15ec9e2bed4d479efa38798a5556b37 532 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 383 409 7.4E-14 T 12-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 JDM601_0916 e15ec9e2bed4d479efa38798a5556b37 532 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 332 351 7.4E-14 T 12-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 JDM601_0916 e15ec9e2bed4d479efa38798a5556b37 532 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 175 199 7.4E-14 T 12-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 JDM601_0916 e15ec9e2bed4d479efa38798a5556b37 532 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 145 164 7.4E-14 T 12-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 JDM601_1933 349f25ff0f0cead641d39d16d193e064 478 SMART SM01240 11 474 4.0E-188 T 12-10-2018 JDM601_1933 349f25ff0f0cead641d39d16d193e064 478 Gene3D G3DSA:3.20.20.70 10 475 7.2E-138 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JDM601_1933 349f25ff0f0cead641d39d16d193e064 478 TIGRFAM TIGR01303 IMP_DH_rel_1: IMP dehydrogenase family protein 2 475 2.9E-255 T 12-10-2018 IPR005991 IMP dehydrogenase-related 1 JDM601_1933 349f25ff0f0cead641d39d16d193e064 478 PIRSF PIRSF000130 4 478 4.7E-145 T 12-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 JDM601_1933 349f25ff0f0cead641d39d16d193e064 478 Pfam PF00571 CBS domain 94 137 0.0011 T 12-10-2018 IPR000644 CBS domain JDM601_1933 349f25ff0f0cead641d39d16d193e064 478 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 13 473 5.8E-104 T 12-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 JDM601_1933 349f25ff0f0cead641d39d16d193e064 478 SUPERFAMILY SSF51412 11 473 2.49E-94 T 12-10-2018 JDM601_1933 349f25ff0f0cead641d39d16d193e064 478 SUPERFAMILY SSF54631 93 198 9.76E-12 T 12-10-2018 JDM601_2237 3156e2fefb073be05dcd27cd95bac8f6 473 Pfam PF00877 NlpC/P60 family 356 470 4.1E-28 T 12-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain JDM601_2237 3156e2fefb073be05dcd27cd95bac8f6 473 Gene3D G3DSA:3.90.1720.10 274 473 1.5E-55 T 12-10-2018 JDM601_2237 3156e2fefb073be05dcd27cd95bac8f6 473 SUPERFAMILY SSF54001 342 470 2.16E-28 T 12-10-2018 IPR038765 Papain-like cysteine peptidase superfamily JDM601_0259 06f49da36f3225774ff59acc9c0c5a70 346 Pfam PF04173 TQO small subunit DoxD 22 182 1.7E-49 T 12-10-2018 IPR007301 TQO small subunit DoxD KEGG: 00920+1.8.5.2|MetaCyc: PWY-5303 JDM601_0259 06f49da36f3225774ff59acc9c0c5a70 346 Pfam PF07680 TQO small subunit DoxA 210 339 3.3E-45 T 12-10-2018 IPR011636 Thiosulphate:quinone oxidoreductase small subunit DoxA KEGG: 00920+1.8.5.2|MetaCyc: PWY-5303 JDM601_0259 06f49da36f3225774ff59acc9c0c5a70 346 PIRSF PIRSF037390 4 345 1.8E-120 T 12-10-2018 IPR017192 Thiosulphate:quinone oxidoreductase, fused subunit DoxA/ DoxD JDM601_2506 c21e7fa8c51cbf3219d9c8d9c5063835 79 SUPERFAMILY SSF69047 13 65 2.62E-8 T 12-10-2018 IPR036629 YjbJ superfamily JDM601_2506 c21e7fa8c51cbf3219d9c8d9c5063835 79 Pfam PF05532 CsbD-like 13 62 2.1E-10 T 12-10-2018 IPR008462 CsbD-like domain JDM601_1553 ca08c64df154caa411752eb23f719148 195 SUPERFAMILY SSF46689 139 185 1.97E-7 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JDM601_1553 ca08c64df154caa411752eb23f719148 195 Gene3D G3DSA:1.10.10.60 91 185 2.9E-18 T 12-10-2018 JDM601_1553 ca08c64df154caa411752eb23f719148 195 SMART SM00342 102 184 4.3E-14 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 JDM601_1553 ca08c64df154caa411752eb23f719148 195 Pfam PF12833 Helix-turn-helix domain 108 185 1.8E-17 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 JDM601_2117 75115c3cfbbceb4e8a3154f1d9afb90a 77 Pfam PF10708 Protein of unknown function (DUF2510) 44 75 2.3E-12 T 12-10-2018 IPR018929 Domain of unknown function DUF2510 JDM601_3649 5c7fdf93bf8cc5ab1c89a563bf5f8581 266 Pfam PF00378 Enoyl-CoA hydratase/isomerase 19 265 2.5E-56 T 12-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 JDM601_3649 5c7fdf93bf8cc5ab1c89a563bf5f8581 266 Gene3D G3DSA:3.90.226.10 7 208 1.9E-75 T 12-10-2018 JDM601_3649 5c7fdf93bf8cc5ab1c89a563bf5f8581 266 Gene3D G3DSA:1.10.12.10 209 266 2.6E-28 T 12-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal JDM601_3649 5c7fdf93bf8cc5ab1c89a563bf5f8581 266 SUPERFAMILY SSF52096 8 266 2.06E-76 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily JDM601_0758 8f8797539944aa7fa72e70beb7347c1b 55 Gene3D G3DSA:1.10.1660.10 3 54 2.1E-8 T 12-10-2018 JDM601_0758 8f8797539944aa7fa72e70beb7347c1b 55 SUPERFAMILY SSF46955 7 43 5.86E-7 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily JDM601_0758 8f8797539944aa7fa72e70beb7347c1b 55 Pfam PF12728 Helix-turn-helix domain 7 45 6.0E-8 T 12-10-2018 JDM601_0468 ac8610a4869e1bdd6af9655c3460fd26 303 Pfam PF11209 Protein of unknown function (DUF2993) 85 285 4.5E-19 T 12-10-2018 IPR021373 Protein of unknown function DUF2993 JDM601_2736 eecf6761ed7b499f096d45f3f3d394c3 230 SUPERFAMILY SSF55021 12 80 6.25E-6 T 12-10-2018 JDM601_3673 3f4d85d18ead64fab3f4fa72b576065b 308 SMART SM00346 10 101 2.7E-15 T 12-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 JDM601_3673 3f4d85d18ead64fab3f4fa72b576065b 308 SUPERFAMILY SSF55781 91 296 2.35E-8 T 12-10-2018 JDM601_3673 3f4d85d18ead64fab3f4fa72b576065b 308 Pfam PF09339 IclR helix-turn-helix domain 14 64 4.3E-12 T 12-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 JDM601_3673 3f4d85d18ead64fab3f4fa72b576065b 308 SUPERFAMILY SSF46785 13 85 6.45E-14 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JDM601_3673 3f4d85d18ead64fab3f4fa72b576065b 308 Gene3D G3DSA:1.10.10.10 5 79 1.1E-19 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JDM601_2623 a5cf87990b099641f658148dddc3462e 101 Pfam PF10611 Protein of unknown function (DUF2469) 1 100 3.6E-52 T 12-10-2018 IPR019592 Protein of unknown function DUF2469 JDM601_2057 e2af261bbe7098dac6ea06c6becb9f67 56 Pfam PF08681 Protein of unknown function (DUF1778) 3 47 2.7E-8 T 12-10-2018 IPR014795 Vibrio phage ICP1, Orf50 JDM601_2057 e2af261bbe7098dac6ea06c6becb9f67 56 SUPERFAMILY SSF47598 3 46 4.22E-6 T 12-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 JDM601_4343 fe84789bd7aa17f747a93e47171eeb1d 193 Pfam PF01424 R3H domain 135 192 2.3E-14 T 12-10-2018 IPR001374 R3H domain GO:0003676 JDM601_4343 fe84789bd7aa17f747a93e47171eeb1d 193 Gene3D G3DSA:3.30.300.20 47 128 5.3E-17 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta JDM601_4343 fe84789bd7aa17f747a93e47171eeb1d 193 Gene3D G3DSA:3.30.1370.50 129 193 3.1E-18 T 12-10-2018 IPR036867 R3H domain superfamily GO:0003676 JDM601_4343 fe84789bd7aa17f747a93e47171eeb1d 193 SMART SM00393 114 193 1.4E-21 T 12-10-2018 IPR001374 R3H domain GO:0003676 JDM601_4343 fe84789bd7aa17f747a93e47171eeb1d 193 Pfam PF13083 KH domain 53 119 1.0E-7 T 12-10-2018 JDM601_4343 fe84789bd7aa17f747a93e47171eeb1d 193 SUPERFAMILY SSF82708 140 192 7.65E-10 T 12-10-2018 IPR036867 R3H domain superfamily GO:0003676 JDM601_1266 37130f46f29be5f8655b90afce01a62e 1403 Pfam PF13558 Putative exonuclease SbcCD, C subunit 1238 1324 6.8E-14 T 12-10-2018 JDM601_1266 37130f46f29be5f8655b90afce01a62e 1403 SUPERFAMILY SSF52540 36 1338 1.59E-5 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_1266 37130f46f29be5f8655b90afce01a62e 1403 TIGRFAM TIGR02680 TIGR02680: TIGR02680 family protein 26 1372 1.7E-193 T 12-10-2018 IPR013496 Conserved hypothetical protein CHP02680 JDM601_3377 4f61c9aa2e41012a1122e991837a2b6b 336 SUPERFAMILY SSF51735 3 328 5.83E-56 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_3377 4f61c9aa2e41012a1122e991837a2b6b 336 Gene3D G3DSA:3.40.50.720 1 330 4.8E-91 T 12-10-2018 JDM601_3377 4f61c9aa2e41012a1122e991837a2b6b 336 Pfam PF01370 NAD dependent epimerase/dehydratase family 6 229 4.8E-28 T 12-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 JDM601_4338 1b3058fa7fb66a2c02ddcfc1107e22ae 110 SUPERFAMILY SSF52833 5 108 1.01E-38 T 12-10-2018 IPR036249 Thioredoxin-like superfamily JDM601_4338 1b3058fa7fb66a2c02ddcfc1107e22ae 110 ProSitePatterns PS00194 Thioredoxin family active site. 27 45 - T 12-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 JDM601_4338 1b3058fa7fb66a2c02ddcfc1107e22ae 110 PRINTS PR00421 Thioredoxin family signature 26 34 8.6E-9 T 12-10-2018 JDM601_4338 1b3058fa7fb66a2c02ddcfc1107e22ae 110 PRINTS PR00421 Thioredoxin family signature 34 43 8.6E-9 T 12-10-2018 JDM601_4338 1b3058fa7fb66a2c02ddcfc1107e22ae 110 PRINTS PR00421 Thioredoxin family signature 74 85 8.6E-9 T 12-10-2018 JDM601_4338 1b3058fa7fb66a2c02ddcfc1107e22ae 110 PIRSF PIRSF000077 4 109 2.1E-43 T 12-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 JDM601_4338 1b3058fa7fb66a2c02ddcfc1107e22ae 110 Pfam PF00085 Thioredoxin 8 106 1.1E-32 T 12-10-2018 IPR013766 Thioredoxin domain GO:0045454 JDM601_4338 1b3058fa7fb66a2c02ddcfc1107e22ae 110 TIGRFAM TIGR01068 thioredoxin: thioredoxin 11 107 1.5E-38 T 12-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 JDM601_4338 1b3058fa7fb66a2c02ddcfc1107e22ae 110 Gene3D G3DSA:3.40.30.10 1 109 1.5E-39 T 12-10-2018 JDM601_1103 76759fbae8f8e9c7b59f6a62be61f349 215 Pfam PF02405 Permease MlaE 2 204 4.4E-56 T 12-10-2018 IPR030802 ABC transporter permease MalE GO:0043190 JDM601_0520 f12bf28981c165937d4074299dd972a6 126 TIGRFAM TIGR00026 hi_GC_TIGR00026: deazaflavin-dependent oxidoreductase, nitroreductase family 22 105 7.9E-18 T 12-10-2018 IPR004378 F420H(2)-dependent quinone reductase GO:0016491|GO:0055114 JDM601_0520 f12bf28981c165937d4074299dd972a6 126 Gene3D G3DSA:2.30.110.10 24 112 7.9E-7 T 12-10-2018 IPR012349 FMN-binding split barrel GO:0048037 JDM601_4280 418d7d3123f6678bfba45188cebedd2c 520 TIGRFAM TIGR00996 Mtu_fam_mce: virulence factor Mce family protein 9 296 1.1E-67 T 12-10-2018 IPR005693 Virulence factor Mce protein JDM601_4280 418d7d3123f6678bfba45188cebedd2c 520 Pfam PF02470 MlaD protein 41 113 7.2E-14 T 12-10-2018 IPR003399 Mce/MlaD JDM601_2069 30c53baa96ed782c147797e4313359ea 163 Gene3D G3DSA:3.40.50.850 87 162 5.5E-7 T 12-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 JDM601_2069 30c53baa96ed782c147797e4313359ea 163 Gene3D G3DSA:3.40.50.850 2 86 3.9E-16 T 12-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 JDM601_2069 30c53baa96ed782c147797e4313359ea 163 SUPERFAMILY SSF52499 3 137 5.1E-17 T 12-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 JDM601_2069 30c53baa96ed782c147797e4313359ea 163 Pfam PF00857 Isochorismatase family 7 84 3.6E-8 T 12-10-2018 IPR000868 Isochorismatase-like GO:0003824 JDM601_0140 ce4a6e7fd82797d45c1a1de4c3d94463 533 Pfam PF11887 Cholesterol uptake porter CUP1 of Mce4, putative 197 410 2.6E-11 T 12-10-2018 IPR024516 Mammalian cell entry, C-terminal JDM601_0140 ce4a6e7fd82797d45c1a1de4c3d94463 533 Pfam PF02470 MlaD protein 48 124 8.7E-7 T 12-10-2018 IPR003399 Mce/MlaD JDM601_2328 43c40c3da1e3e9971ed89e46ef5493f2 166 Gene3D G3DSA:1.10.940.10 1 133 2.7E-46 T 12-10-2018 IPR035926 NusB-like superfamily JDM601_2328 43c40c3da1e3e9971ed89e46ef5493f2 166 Pfam PF01029 NusB family 5 132 9.3E-34 T 12-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 JDM601_2328 43c40c3da1e3e9971ed89e46ef5493f2 166 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 4 133 2.9E-37 T 12-10-2018 IPR011605 NusB antitermination factor GO:0006353 JDM601_2328 43c40c3da1e3e9971ed89e46ef5493f2 166 SUPERFAMILY SSF48013 4 132 2.22E-37 T 12-10-2018 IPR035926 NusB-like superfamily JDM601_2328 43c40c3da1e3e9971ed89e46ef5493f2 166 Hamap MF_00073 Transcription antitermination protein NusB [nusB]. 2 137 21.484 T 12-10-2018 IPR011605 NusB antitermination factor GO:0006353 JDM601_2799 db47ae5de98249cd61cd8514b21bdd01 755 Pfam PF02554 Carbon starvation protein CstA 67 444 1.4E-162 T 12-10-2018 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 JDM601_2799 db47ae5de98249cd61cd8514b21bdd01 755 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 503 637 7.2E-31 T 12-10-2018 IPR025299 CstA, C-terminal domain JDM601_2432 eab092ea3ade1ea8531884d4d3229cea 665 Gene3D G3DSA:1.20.1740.10 50 502 7.1E-16 T 12-10-2018 JDM601_2432 eab092ea3ade1ea8531884d4d3229cea 665 Pfam PF13520 Amino acid permease 65 458 1.0E-23 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 JDM601_3709 70f2b9a3a244bb1d5600763d0b4f35a1 128 Gene3D G3DSA:3.10.180.10 2 127 2.5E-26 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase JDM601_3709 70f2b9a3a244bb1d5600763d0b4f35a1 128 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 10 124 1.4E-11 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain JDM601_3709 70f2b9a3a244bb1d5600763d0b4f35a1 128 SUPERFAMILY SSF54593 9 127 2.89E-22 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase JDM601_1867 fd2babfcecc96be17ebf58279b73e6e4 561 Gene3D G3DSA:3.40.1090.10 161 286 5.1E-9 T 12-10-2018 JDM601_1867 fd2babfcecc96be17ebf58279b73e6e4 561 Pfam PF01734 Patatin-like phospholipase 178 416 1.9E-15 T 12-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 JDM601_1867 fd2babfcecc96be17ebf58279b73e6e4 561 SUPERFAMILY SSF52151 173 500 9.68E-22 T 12-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase JDM601_0213 6db1d64a550873500756268c58feb668 200 TIGRFAM TIGR01755 flav_wrbA: NAD(P)H:quinone oxidoreductase, type IV 2 197 8.2E-43 T 12-10-2018 IPR010089 Flavoprotein WrbA-like GO:0003955|GO:0010181 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 JDM601_0213 6db1d64a550873500756268c58feb668 200 SUPERFAMILY SSF52218 1 197 4.59E-51 T 12-10-2018 IPR029039 Flavoprotein-like superfamily JDM601_0213 6db1d64a550873500756268c58feb668 200 Pfam PF03358 NADPH-dependent FMN reductase 3 129 1.1E-14 T 12-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 JDM601_0213 6db1d64a550873500756268c58feb668 200 Gene3D G3DSA:3.40.50.360 1 199 3.8E-66 T 12-10-2018 IPR029039 Flavoprotein-like superfamily JDM601_0097 242f4cae3bdb992fa0441cf9a5cf8c04 277 Gene3D G3DSA:3.90.190.10 11 276 5.0E-70 T 12-10-2018 IPR029021 Protein-tyrosine phosphatase-like JDM601_0097 242f4cae3bdb992fa0441cf9a5cf8c04 277 Pfam PF13350 Tyrosine phosphatase family 12 276 4.3E-55 T 12-10-2018 IPR026893 Tyrosine/serine-protein phosphatase IphP-type JDM601_0097 242f4cae3bdb992fa0441cf9a5cf8c04 277 SUPERFAMILY SSF52799 12 275 2.4E-52 T 12-10-2018 IPR029021 Protein-tyrosine phosphatase-like JDM601_4245 2c44e61f6576953157a12ec28308becc 271 Gene3D G3DSA:3.40.50.720 1 246 1.3E-40 T 12-10-2018 JDM601_4245 2c44e61f6576953157a12ec28308becc 271 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 140 237 1.4E-17 T 12-10-2018 JDM601_4245 2c44e61f6576953157a12ec28308becc 271 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 202 222 6.1E-15 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_4245 2c44e61f6576953157a12ec28308becc 271 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 183 6.1E-15 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_4245 2c44e61f6576953157a12ec28308becc 271 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 49 60 6.1E-15 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_4245 2c44e61f6576953157a12ec28308becc 271 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 143 162 6.1E-15 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_4245 2c44e61f6576953157a12ec28308becc 271 SUPERFAMILY SSF51735 1 241 1.59E-37 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_2717 77205b153b0e7699aef581e120020d90 338 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 233 252 - T 12-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 JDM601_2717 77205b153b0e7699aef581e120020d90 338 SUPERFAMILY SSF53659 2 336 4.8E-105 T 12-10-2018 JDM601_2717 77205b153b0e7699aef581e120020d90 338 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 4 319 1.6E-81 T 12-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 JDM601_2717 77205b153b0e7699aef581e120020d90 338 Hamap MF_01035 3-isopropylmalate dehydrogenase [leuB]. 3 338 57.879 T 12-10-2018 IPR023698 3-isopropylmalate dehydrogenase GO:0003862|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 JDM601_2717 77205b153b0e7699aef581e120020d90 338 SMART SM01329 4 334 6.4E-153 T 12-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 JDM601_2717 77205b153b0e7699aef581e120020d90 338 Gene3D G3DSA:3.40.718.10 2 337 1.1E-128 T 12-10-2018 JDM601_4284 a9c2ad8a6d365bf7dab214b347143ae9 343 TIGRFAM TIGR00996 Mtu_fam_mce: virulence factor Mce family protein 11 296 9.4E-60 T 12-10-2018 IPR005693 Virulence factor Mce protein JDM601_4284 a9c2ad8a6d365bf7dab214b347143ae9 343 Pfam PF02470 MlaD protein 38 111 4.6E-13 T 12-10-2018 IPR003399 Mce/MlaD JDM601_2021 4baa32773afa356ed1bbaa31e5c3ebe4 279 Gene3D G3DSA:1.10.530.10 124 256 2.6E-15 T 12-10-2018 JDM601_2021 4baa32773afa356ed1bbaa31e5c3ebe4 279 SUPERFAMILY SSF53955 90 232 4.5E-25 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily JDM601_2021 4baa32773afa356ed1bbaa31e5c3ebe4 279 Pfam PF01464 Transglycosylase SLT domain 131 228 8.1E-7 T 12-10-2018 IPR008258 Transglycosylase SLT domain 1 JDM601_0297 c379a37709c248ca33b43913614f34fb 293 Pfam PF14011 EspG family 13 268 3.7E-61 T 12-10-2018 IPR025734 EspG family JDM601_2360 d75fd2033148f4b8ea140f198c3c6831 75 SUPERFAMILY SSF140459 4 59 2.88E-15 T 12-10-2018 JDM601_2360 d75fd2033148f4b8ea140f198c3c6831 75 Pfam PF00934 PE family 2 69 3.5E-20 T 12-10-2018 IPR000084 PE-PGRS family, N-terminal JDM601_2360 d75fd2033148f4b8ea140f198c3c6831 75 Gene3D G3DSA:1.10.287.850 1 74 4.4E-21 T 12-10-2018 JDM601_4082 7d0a4818b33a9322611b27023b62ddb8 305 Pfam PF00535 Glycosyl transferase family 2 7 117 2.1E-9 T 12-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 JDM601_4082 7d0a4818b33a9322611b27023b62ddb8 305 Gene3D G3DSA:3.90.550.10 2 221 6.3E-14 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases JDM601_4082 7d0a4818b33a9322611b27023b62ddb8 305 SUPERFAMILY SSF53448 4 276 4.78E-29 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases JDM601_3493 f91a20479cbf88848440df7242f31731 558 Gene3D G3DSA:3.40.47.10 170 555 5.8E-84 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 JDM601_3493 f91a20479cbf88848440df7242f31731 558 SUPERFAMILY SSF53901 440 545 1.73E-14 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 JDM601_3493 f91a20479cbf88848440df7242f31731 558 SUPERFAMILY SSF50249 5 127 6.0E-27 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold JDM601_3493 f91a20479cbf88848440df7242f31731 558 Pfam PF01796 DUF35 OB-fold domain, acyl-CoA-associated 57 121 2.4E-12 T 12-10-2018 IPR002878 Domain of unknown function DUF35, OB-fold, C-terminal JDM601_3493 f91a20479cbf88848440df7242f31731 558 SUPERFAMILY SSF53901 176 403 3.3E-15 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 JDM601_3493 f91a20479cbf88848440df7242f31731 558 Pfam PF12172 Rubredoxin-like zinc ribbon domain (DUF35_N) 19 54 4.8E-10 T 12-10-2018 IPR022002 Domain of unknown function DUF35, rubredoxin-like zinc ribbon domain, N-terminal JDM601_1871 5ecf453b6f6ae254b89c0c925bbe1028 527 PRINTS PR01228 Eggshell protein signature 142 152 9.8E-6 T 12-10-2018 JDM601_1871 5ecf453b6f6ae254b89c0c925bbe1028 527 PRINTS PR01228 Eggshell protein signature 50 61 9.8E-6 T 12-10-2018 JDM601_1871 5ecf453b6f6ae254b89c0c925bbe1028 527 PRINTS PR01228 Eggshell protein signature 113 128 9.8E-6 T 12-10-2018 JDM601_1871 5ecf453b6f6ae254b89c0c925bbe1028 527 PRINTS PR01228 Eggshell protein signature 175 193 9.8E-6 T 12-10-2018 JDM601_0136 1d10cbffa9a1f8dc2a80bd69919e3001 396 Pfam PF11887 Cholesterol uptake porter CUP1 of Mce4, putative 155 247 2.2E-9 T 12-10-2018 IPR024516 Mammalian cell entry, C-terminal JDM601_0136 1d10cbffa9a1f8dc2a80bd69919e3001 396 Pfam PF02470 MlaD protein 28 102 1.3E-8 T 12-10-2018 IPR003399 Mce/MlaD JDM601_4271 34799298b131fc2b8aefa2a83ee9f54f 559 SUPERFAMILY SSF51905 6 557 3.54E-33 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_4271 34799298b131fc2b8aefa2a83ee9f54f 559 Pfam PF00890 FAD binding domain 10 539 3.2E-85 T 12-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 JDM601_4271 34799298b131fc2b8aefa2a83ee9f54f 559 SUPERFAMILY SSF56425 315 491 1.07E-32 T 12-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 JDM601_2730 4d69206e22927a78bcf5dfcc843f7122 128 Pfam PF09996 Uncharacterized protein conserved in bacteria (DUF2237) 4 118 4.4E-49 T 12-10-2018 IPR018714 Protein of unknown function DUF2237 JDM601_2730 4d69206e22927a78bcf5dfcc843f7122 128 Gene3D G3DSA:3.30.56.110 2 126 6.0E-49 T 12-10-2018 JDM601_1892 9a201e6dc69e1e5809f4296e3e6efbca 484 TIGRFAM TIGR03919 T7SS_EccB: type VII secretion protein EccB 2 460 4.6E-144 T 12-10-2018 IPR007795 Type VII secretion system EccB JDM601_1892 9a201e6dc69e1e5809f4296e3e6efbca 484 Gene3D G3DSA:2.40.50.910 238 318 9.4E-12 T 12-10-2018 JDM601_1892 9a201e6dc69e1e5809f4296e3e6efbca 484 Gene3D G3DSA:2.40.50.900 57 129 8.1E-25 T 12-10-2018 JDM601_1892 9a201e6dc69e1e5809f4296e3e6efbca 484 Pfam PF05108 Type VII secretion system ESX-1, transport TM domain B 2 472 1.8E-144 T 12-10-2018 IPR007795 Type VII secretion system EccB JDM601_2091 e01d702d7420ed75b913638d330dc924 117 Pfam PF13564 DoxX-like family 13 110 2.2E-22 T 12-10-2018 IPR032808 DoxX family JDM601_3182 c1e9b7ba35cb13588456ac57d041c3cf 350 Gene3D G3DSA:1.10.3470.10 9 347 5.8E-88 T 12-10-2018 IPR037294 ABC transporter, BtuC-like JDM601_3182 c1e9b7ba35cb13588456ac57d041c3cf 350 SUPERFAMILY SSF81345 9 341 4.05E-68 T 12-10-2018 IPR037294 ABC transporter, BtuC-like JDM601_3182 c1e9b7ba35cb13588456ac57d041c3cf 350 Pfam PF01032 FecCD transport family 23 341 3.1E-77 T 12-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 JDM601_3606 0b8b3c370905a546a34dfde3925b15d8 184 Gene3D G3DSA:3.10.450.50 9 143 4.7E-6 T 12-10-2018 JDM601_3606 0b8b3c370905a546a34dfde3925b15d8 184 SUPERFAMILY SSF54427 8 137 1.35E-15 T 12-10-2018 IPR032710 NTF2-like domain superfamily JDM601_3167 74fe890a16d0ffcd1436596b70252007 658 SUPERFAMILY SSF53300 476 649 2.49E-23 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily JDM601_3167 74fe890a16d0ffcd1436596b70252007 658 SMART SM00382 36 214 3.6E-7 T 12-10-2018 IPR003593 AAA+ ATPase domain JDM601_3167 74fe890a16d0ffcd1436596b70252007 658 Gene3D G3DSA:3.40.50.410 474 652 8.7E-23 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily JDM601_3167 74fe890a16d0ffcd1436596b70252007 658 Pfam PF13519 von Willebrand factor type A domain 476 582 1.2E-13 T 12-10-2018 IPR002035 von Willebrand factor, type A JDM601_3167 74fe890a16d0ffcd1436596b70252007 658 Gene3D G3DSA:3.40.50.300 18 211 2.1E-55 T 12-10-2018 JDM601_3167 74fe890a16d0ffcd1436596b70252007 658 SUPERFAMILY SSF52540 16 338 5.13E-56 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_3167 74fe890a16d0ffcd1436596b70252007 658 Pfam PF01078 Magnesium chelatase, subunit ChlI 123 191 7.1E-8 T 12-10-2018 IPR000523 Magnesium chelatase ChlI domain JDM601_3167 74fe890a16d0ffcd1436596b70252007 658 Gene3D G3DSA:1.10.8.80 256 342 1.1E-29 T 12-10-2018 JDM601_3167 74fe890a16d0ffcd1436596b70252007 658 SMART SM00327 472 653 2.7E-21 T 12-10-2018 IPR002035 von Willebrand factor, type A JDM601_0148 52ee604d1a0ce5cb6985f6bc2149e2c6 158 Pfam PF16708 Lipoprotein confined to pathogenic Mycobacterium 2 155 2.4E-50 T 12-10-2018 IPR032018 Putative lipoprotein, pathogenic bacteria JDM601_0148 52ee604d1a0ce5cb6985f6bc2149e2c6 158 Gene3D G3DSA:3.30.2030.20 7 157 7.7E-12 T 12-10-2018 JDM601_4163 e01ba908c60ddd4657397b4c33d6a7a8 225 Pfam PF07987 Domain of unkown function (DUF1775) 28 160 2.9E-30 T 12-10-2018 IPR012533 YcnI-like JDM601_4163 e01ba908c60ddd4657397b4c33d6a7a8 225 Gene3D G3DSA:2.60.40.2230 26 190 5.6E-42 T 12-10-2018 IPR038507 YcnI-like superfamily JDM601_0019 3020c347383d5ca31d91fa1ceed362ca 485 Pfam PF13672 Protein phosphatase 2C 15 195 1.2E-11 T 12-10-2018 JDM601_0019 3020c347383d5ca31d91fa1ceed362ca 485 SMART SM00331 8 232 2.3E-49 T 12-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 JDM601_0019 3020c347383d5ca31d91fa1ceed362ca 485 Gene3D G3DSA:3.60.40.10 1 233 3.5E-66 T 12-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 JDM601_0019 3020c347383d5ca31d91fa1ceed362ca 485 SUPERFAMILY SSF81606 2 231 4.71E-63 T 12-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 JDM601_0019 3020c347383d5ca31d91fa1ceed362ca 485 SMART SM00332 2 230 2.0E-26 T 12-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 JDM601_1733 dd336e8cd30658a90e95430b33dd8c9d 133 Pfam PF11239 Protein of unknown function (DUF3040) 1 87 6.5E-29 T 12-10-2018 IPR021401 Protein of unknown function DUF3040 JDM601_0175 02b320d8a505088aa302e92dec3d40ba 76 Gene3D G3DSA:3.40.1620.10 1 39 3.9E-11 T 12-10-2018 JDM601_0175 02b320d8a505088aa302e92dec3d40ba 76 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 4 40 1.0E-7 T 12-10-2018 JDM601_0175 02b320d8a505088aa302e92dec3d40ba 76 SUPERFAMILY SSF143120 1 44 1.44E-10 T 12-10-2018 IPR036165 YefM-like superfamily JDM601_0175 02b320d8a505088aa302e92dec3d40ba 76 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 1 39 1.9E-10 T 12-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM JDM601_3809 0a6e610e95ffeee5d7bf758a681e06fd 70 SUPERFAMILY SSF48008 9 49 3.4E-5 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal JDM601_3809 0a6e610e95ffeee5d7bf758a681e06fd 70 Gene3D G3DSA:1.20.120.530 1 66 3.6E-6 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal JDM601_1231 ebabd6fac3e31f84e06ca18304baef17 152 Gene3D G3DSA:2.30.110.10 10 148 2.6E-44 T 12-10-2018 IPR012349 FMN-binding split barrel GO:0048037 JDM601_1231 ebabd6fac3e31f84e06ca18304baef17 152 TIGRFAM TIGR00026 hi_GC_TIGR00026: deazaflavin-dependent oxidoreductase, nitroreductase family 32 147 3.6E-36 T 12-10-2018 IPR004378 F420H(2)-dependent quinone reductase GO:0016491|GO:0055114 JDM601_1231 ebabd6fac3e31f84e06ca18304baef17 152 Pfam PF04075 F420H(2)-dependent quinone reductase 16 147 2.3E-51 T 12-10-2018 IPR004378 F420H(2)-dependent quinone reductase GO:0016491|GO:0055114 JDM601_1591 df98374206fc53d0a22d851dbb5652eb 268 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 64 253 1.6E-16 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 JDM601_1591 df98374206fc53d0a22d851dbb5652eb 268 SUPERFAMILY SSF161098 32 253 8.63E-54 T 12-10-2018 IPR035906 MetI-like superfamily JDM601_1591 df98374206fc53d0a22d851dbb5652eb 268 Gene3D G3DSA:1.10.3720.10 27 263 5.5E-65 T 12-10-2018 IPR035906 MetI-like superfamily JDM601_0490 048438f080078d0c689997a6c94244b4 262 ProDom PD040376 SCO3349 RV0495C/MT0515 ML2435 MB0506C CGL0407 12 257 7.0E-112 T 12-10-2018 JDM601_4294 2fac26bacd1969caf3d218be2d573941 480 Gene3D G3DSA:3.40.720.10 39 143 4.2E-11 T 12-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 JDM601_4294 2fac26bacd1969caf3d218be2d573941 480 Gene3D G3DSA:3.40.720.10 153 327 1.7E-23 T 12-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 JDM601_4294 2fac26bacd1969caf3d218be2d573941 480 SUPERFAMILY SSF53649 43 318 1.6E-25 T 12-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 JDM601_4294 2fac26bacd1969caf3d218be2d573941 480 Pfam PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase 164 259 2.3E-7 T 12-10-2018 IPR002591 Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase GO:0003824 JDM601_4294 2fac26bacd1969caf3d218be2d573941 480 Pfam PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase 44 114 3.7E-7 T 12-10-2018 IPR002591 Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase GO:0003824 JDM601_0129 fd9bcd563c6172ee29b9242da52168b6 317 Pfam PF06271 RDD family 14 139 4.4E-12 T 12-10-2018 IPR010432 RDD JDM601_1414 7cc28e928bb20cddeda68fd9df33e592 162 Pfam PF13469 Sulfotransferase family 3 112 3.2E-20 T 12-10-2018 JDM601_1414 7cc28e928bb20cddeda68fd9df33e592 162 Gene3D G3DSA:3.40.50.300 1 154 9.1E-44 T 12-10-2018 JDM601_1414 7cc28e928bb20cddeda68fd9df33e592 162 SUPERFAMILY SSF52540 1 141 1.18E-16 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_0013 7ec2c7eb442e2d4d16b1633c59d9abc7 250 Gene3D G3DSA:3.30.70.1880 89 248 1.9E-29 T 12-10-2018 JDM601_0013 7ec2c7eb442e2d4d16b1633c59d9abc7 250 Pfam PF05949 Bacterial protein of unknown function (DUF881) 91 242 8.1E-38 T 12-10-2018 IPR010273 Protein of unknown function DUF881 JDM601_0558 117ebdadf95bf17db56981b9a6fc6f5a 282 Pfam PF01435 Peptidase family M48 70 279 3.1E-39 T 12-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 JDM601_0558 117ebdadf95bf17db56981b9a6fc6f5a 282 Gene3D G3DSA:3.30.2010.10 62 152 2.3E-28 T 12-10-2018 JDM601_0558 117ebdadf95bf17db56981b9a6fc6f5a 282 Hamap MF_00188 Protease HtpX [htpX]. 9 279 27.328 T 12-10-2018 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 JDM601_1982 2ffea8c971b29c84710239aa7e5a1297 425 Pfam PF01882 Protein of unknown function DUF58 197 280 2.8E-17 T 12-10-2018 IPR002881 Domain of unknown function DUF58 JDM601_1019 0494545cb454601e79babf73d28da0cd 61 Gene3D G3DSA:3.40.960.10 1 59 1.5E-5 T 12-10-2018 JDM601_4030 cc1535a6c04e2aef6ebd0e72c378df2b 243 SUPERFAMILY SSF53187 33 241 9.1E-31 T 12-10-2018 JDM601_4030 cc1535a6c04e2aef6ebd0e72c378df2b 243 SMART SM00646 117 238 1.1E-26 T 12-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 JDM601_4030 cc1535a6c04e2aef6ebd0e72c378df2b 243 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 36 238 1.1E-29 T 12-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 JDM601_4030 cc1535a6c04e2aef6ebd0e72c378df2b 243 Gene3D G3DSA:3.40.630.40 31 242 5.1E-54 T 12-10-2018 JDM601_4298 5392ba2073f83a3b8753592a9f52e8ba 375 SUPERFAMILY SSF50182 190 254 4.9E-13 T 12-10-2018 IPR010920 LSM domain superfamily JDM601_4298 5392ba2073f83a3b8753592a9f52e8ba 375 Pfam PF00924 Mechanosensitive ion channel 148 314 6.3E-26 T 12-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 JDM601_0801 8348a53667e2765d80e1ba787d5aa47a 166 ProDom PD034580 PRECURSOR SIGNAL EXPORTED MB0899C RV0875C/MT0898 MLCB57.27C POSSIBLE 18 160 7.0E-41 T 12-10-2018 IPR024495 Protein of unknown function DUF2771 JDM601_0801 8348a53667e2765d80e1ba787d5aa47a 166 Pfam PF10969 Protein of unknown function (DUF2771) 3 156 1.8E-44 T 12-10-2018 IPR024495 Protein of unknown function DUF2771 JDM601_2193 3e5f18d7d2d2b61f61978ae78bab20ef 146 Gene3D G3DSA:3.30.300.20 3 145 5.3E-33 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta JDM601_2193 3e5f18d7d2d2b61f61978ae78bab20ef 146 SUPERFAMILY SSF82784 6 136 2.22E-24 T 12-10-2018 IPR036102 OsmC/Ohr superfamily JDM601_2193 3e5f18d7d2d2b61f61978ae78bab20ef 146 TIGRFAM TIGR03562 osmo_induc_OsmC: peroxiredoxin, OsmC subfamily 6 143 1.4E-41 T 12-10-2018 IPR019904 Peroxiredoxin OsmC GO:0004601|GO:0006979 KEGG: 00480+1.11.1.15 JDM601_2193 3e5f18d7d2d2b61f61978ae78bab20ef 146 Pfam PF02566 OsmC-like protein 46 140 2.8E-13 T 12-10-2018 IPR003718 OsmC/Ohr family JDM601_1684 79dff162da3d4c6153a85751e6e2114a 250 ProDom PD037701 MEMBRANE INTEGRAL TRANSMEMBRANE RV2219/MT2276 NARROWLY PROBABLE PRECURSOR SIGNAL MLCB22.21 32 239 1.0E-79 T 12-10-2018 JDM601_1684 79dff162da3d4c6153a85751e6e2114a 250 Pfam PF13829 Domain of unknown function (DUF4191) 23 241 2.1E-81 T 12-10-2018 IPR025445 Protein of unknown function DUF4191 JDM601_1513 7ba8723d94685aebf5d81f05d16f8b10 285 SUPERFAMILY SSF161098 32 273 5.23E-50 T 12-10-2018 IPR035906 MetI-like superfamily JDM601_1513 7ba8723d94685aebf5d81f05d16f8b10 285 TIGRFAM TIGR02139 permease_CysT: sulfate ABC transporter, permease protein CysT 27 278 2.3E-77 T 12-10-2018 IPR011865 Sulphate ABC transporter, permease protein CysT GO:0008272|GO:0015116|GO:0016021 JDM601_1513 7ba8723d94685aebf5d81f05d16f8b10 285 Gene3D G3DSA:1.10.3720.10 30 283 1.2E-59 T 12-10-2018 IPR035906 MetI-like superfamily JDM601_1513 7ba8723d94685aebf5d81f05d16f8b10 285 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 90 281 7.4E-26 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 JDM601_3676 63abd78852852b9687c84337ec4fe899 79 Pfam PF16525 Haemophore, haem-binding 21 76 8.3E-7 T 12-10-2018 IPR032407 Haemophore, haem-binding GO:0020037 JDM601_3676 63abd78852852b9687c84337ec4fe899 79 Gene3D G3DSA:1.20.20.20 13 78 2.6E-6 T 12-10-2018 IPR038378 Haemophore, haem-binding domain superfamily JDM601_0300 7eb593cbd4c7107b5e862ebc7bcea16a 328 TIGRFAM TIGR03923 T7SS_EccE: type VII secretion protein EccE 15 300 3.0E-59 T 12-10-2018 IPR021368 Type VII secretion system protein EccE JDM601_0300 7eb593cbd4c7107b5e862ebc7bcea16a 328 Pfam PF11203 Putative type VII ESX secretion system translocon, EccE 138 222 3.4E-13 T 12-10-2018 IPR021368 Type VII secretion system protein EccE JDM601_3305 d6a044a9eb7f94f6ce7a39f1221bd54a 101 Pfam PF05305 Protein of unknown function (DUF732) 6 100 1.3E-22 T 12-10-2018 IPR007969 Domain of unknown function DUF732 JDM601_3308 e8dce077d108a22eaef5fc252ab04405 86 Pfam PF05305 Protein of unknown function (DUF732) 10 84 2.4E-13 T 12-10-2018 IPR007969 Domain of unknown function DUF732 JDM601_2919 9ac0ef0c4a88c0c79ccacfc0cf63db6b 98 SUPERFAMILY SSF46767 6 81 2.88E-15 T 12-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 JDM601_2919 9ac0ef0c4a88c0c79ccacfc0cf63db6b 98 Gene3D G3DSA:1.10.10.10 4 98 5.4E-20 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JDM601_2919 9ac0ef0c4a88c0c79ccacfc0cf63db6b 98 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 10 82 9.1E-16 T 12-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 JDM601_2511 31d4087ea5698258a268cae2f836b413 246 Pfam PF01738 Dienelactone hydrolase family 17 242 9.9E-55 T 12-10-2018 IPR002925 Dienelactone hydrolase GO:0016787 JDM601_2511 31d4087ea5698258a268cae2f836b413 246 Gene3D G3DSA:3.40.50.1820 4 242 3.5E-48 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_2511 31d4087ea5698258a268cae2f836b413 246 SUPERFAMILY SSF53474 5 241 6.34E-42 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_3550 0c1efd38c6438c19761915fa64aaf6f6 55 Pfam PF11273 Protein of unknown function (DUF3073) 2 52 3.8E-23 T 12-10-2018 IPR021426 Protein of unknown function DUF3073 JDM601_0815 a48b79e40a36ab0c1af72827b6081079 423 Pfam PF05977 Transmembrane secretion effector 8 403 5.4E-26 T 12-10-2018 IPR010290 Transmembrane secretion effector JDM601_0815 a48b79e40a36ab0c1af72827b6081079 423 SUPERFAMILY SSF103473 11 410 1.31E-29 T 12-10-2018 IPR036259 MFS transporter superfamily JDM601_0815 a48b79e40a36ab0c1af72827b6081079 423 Gene3D G3DSA:1.20.1250.20 9 411 5.8E-28 T 12-10-2018 JDM601_2337 8a7c28088779e4ee2e9572339b45ee1d 142 Pfam PF01478 Type IV leader peptidase family 8 109 1.5E-13 T 12-10-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 JDM601_0159 49aaed242e68c06e5ce0bdf80e6ef812 383 SUPERFAMILY SSF103473 1 376 6.02E-42 T 12-10-2018 IPR036259 MFS transporter superfamily JDM601_0159 49aaed242e68c06e5ce0bdf80e6ef812 383 Gene3D G3DSA:1.20.1250.20 1 375 5.7E-35 T 12-10-2018 JDM601_0159 49aaed242e68c06e5ce0bdf80e6ef812 383 Pfam PF07690 Major Facilitator Superfamily 5 321 4.0E-24 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 JDM601_1337 9b898d1ea19a8a38f233080a1e87fc14 94 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 18 88 6.3E-21 T 12-10-2018 IPR003769 Adaptor protein ClpS, core GO:0030163 Reactome: R-HSA-983168 JDM601_1337 9b898d1ea19a8a38f233080a1e87fc14 94 SUPERFAMILY SSF54736 16 91 7.32E-24 T 12-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like JDM601_1337 9b898d1ea19a8a38f233080a1e87fc14 94 Gene3D G3DSA:3.30.1390.10 4 92 2.8E-17 T 12-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like JDM601_1337 9b898d1ea19a8a38f233080a1e87fc14 94 Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. 12 94 17.056 T 12-10-2018 IPR022935 ATP-dependent Clp protease adaptor protein ClpS JDM601_2485 3d2e37ba2548cf7d965170bf43f30820 64 Pfam PF11248 Protein of unknown function (DUF3046) 1 61 7.5E-30 T 12-10-2018 IPR021408 Protein of unknown function DUF3046 JDM601_0025 e4a6ef9c83ac2cd646cfaa0fb43bd1cc 87 Gene3D G3DSA:1.20.5.780 1 82 8.4E-14 T 12-10-2018 JDM601_0025 e4a6ef9c83ac2cd646cfaa0fb43bd1cc 87 Pfam PF08681 Protein of unknown function (DUF1778) 5 80 1.4E-23 T 12-10-2018 IPR014795 Vibrio phage ICP1, Orf50 JDM601_0025 e4a6ef9c83ac2cd646cfaa0fb43bd1cc 87 SUPERFAMILY SSF47598 1 79 2.08E-19 T 12-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 JDM601_2414 af5ffb4a64068780009f2d238f3effd7 248 SUPERFAMILY SSF81923 98 236 4.55E-24 T 12-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 JDM601_2414 af5ffb4a64068780009f2d238f3effd7 248 Gene3D G3DSA:1.10.1780.10 95 239 1.2E-35 T 12-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 JDM601_2414 af5ffb4a64068780009f2d238f3effd7 248 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 110 157 1.9E-8 T 12-10-2018 IPR004176 Clp, N-terminal JDM601_2414 af5ffb4a64068780009f2d238f3effd7 248 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 187 232 1.3E-10 T 12-10-2018 IPR004176 Clp, N-terminal JDM601_3004 c7ff2128335f17678815e5f59c605a38 422 Pfam PF01238 Phosphomannose isomerase type I 4 384 4.4E-67 T 12-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 JDM601_3004 c7ff2128335f17678815e5f59c605a38 422 Gene3D G3DSA:1.10.441.10 150 323 1.6E-128 T 12-10-2018 JDM601_3004 c7ff2128335f17678815e5f59c605a38 422 Gene3D G3DSA:2.60.120.10 7 298 1.6E-128 T 12-10-2018 IPR014710 RmlC-like jelly roll fold JDM601_3004 c7ff2128335f17678815e5f59c605a38 422 Gene3D G3DSA:2.60.120.10 324 407 1.6E-128 T 12-10-2018 IPR014710 RmlC-like jelly roll fold JDM601_3004 c7ff2128335f17678815e5f59c605a38 422 SUPERFAMILY SSF51182 3 402 1.14E-96 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily JDM601_3004 c7ff2128335f17678815e5f59c605a38 422 TIGRFAM TIGR00218 manA: mannose-6-phosphate isomerase, class I 4 413 1.6E-70 T 12-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 JDM601_3004 c7ff2128335f17678815e5f59c605a38 422 PRINTS PR00714 Phosphomannose isomerase type I signature 243 258 1.8E-63 T 12-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 JDM601_3004 c7ff2128335f17678815e5f59c605a38 422 PRINTS PR00714 Phosphomannose isomerase type I signature 259 278 1.8E-63 T 12-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 JDM601_3004 c7ff2128335f17678815e5f59c605a38 422 PRINTS PR00714 Phosphomannose isomerase type I signature 126 149 1.8E-63 T 12-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 JDM601_3004 c7ff2128335f17678815e5f59c605a38 422 PRINTS PR00714 Phosphomannose isomerase type I signature 278 297 1.8E-63 T 12-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 JDM601_3004 c7ff2128335f17678815e5f59c605a38 422 PRINTS PR00714 Phosphomannose isomerase type I signature 32 47 1.8E-63 T 12-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 JDM601_3004 c7ff2128335f17678815e5f59c605a38 422 PRINTS PR00714 Phosphomannose isomerase type I signature 4 22 1.8E-63 T 12-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 JDM601_3004 c7ff2128335f17678815e5f59c605a38 422 PRINTS PR00714 Phosphomannose isomerase type I signature 297 316 1.8E-63 T 12-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 JDM601_3004 c7ff2128335f17678815e5f59c605a38 422 PRINTS PR00714 Phosphomannose isomerase type I signature 81 102 1.8E-63 T 12-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 JDM601_3004 c7ff2128335f17678815e5f59c605a38 422 PIRSF PIRSF001480 1 422 4.7E-104 T 12-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 JDM601_3812 4a58895a5a9211c4936f5ca64ea2ce9a 256 Gene3D G3DSA:3.90.226.10 2 255 1.1E-73 T 12-10-2018 JDM601_3812 4a58895a5a9211c4936f5ca64ea2ce9a 256 Pfam PF00378 Enoyl-CoA hydratase/isomerase 12 239 6.2E-54 T 12-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 JDM601_3812 4a58895a5a9211c4936f5ca64ea2ce9a 256 SUPERFAMILY SSF52096 2 249 3.43E-71 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily JDM601_3812 4a58895a5a9211c4936f5ca64ea2ce9a 256 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 101 121 - T 12-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 JDM601_2126 4387c1f4a57d73a56df41db50b281e3f 177 Pfam PF13828 Domain of unknown function (DUF4190) 47 110 1.5E-9 T 12-10-2018 IPR025241 Domain of unknown function DUF4190 JDM601_4206 162934d1f8c43efb022f10f7e6f1553a 83 SUPERFAMILY SSF47598 5 46 9.89E-9 T 12-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 JDM601_4206 162934d1f8c43efb022f10f7e6f1553a 83 TIGRFAM TIGR02606 antidote_CC2985: putative addiction module antidote protein, CC2985 family 4 72 2.9E-27 T 12-10-2018 IPR022789 Antitoxin ParD JDM601_4206 162934d1f8c43efb022f10f7e6f1553a 83 Pfam PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH 1 80 1.2E-40 T 12-10-2018 IPR022789 Antitoxin ParD JDM601_4206 162934d1f8c43efb022f10f7e6f1553a 83 Gene3D G3DSA:1.10.8.1250 11 82 4.5E-27 T 12-10-2018 IPR038296 Antitoxin ParD superfamily JDM601_0839 55722bcc2bcd8720951ec9acbbf67aba 255 Pfam PF05241 Emopamil binding protein 98 244 1.7E-7 T 12-10-2018 IPR007905 Emopamil-binding protein GO:0016021|GO:0016125|GO:0047750 JDM601_3242 d8f2d3121526c93a8a8a343eb7eac9b4 369 Gene3D G3DSA:3.40.50.1820 55 353 7.7E-51 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_3242 d8f2d3121526c93a8a8a343eb7eac9b4 369 SUPERFAMILY SSF53474 64 346 1.12E-48 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_3242 d8f2d3121526c93a8a8a343eb7eac9b4 369 Pfam PF12697 Alpha/beta hydrolase family 85 337 1.5E-21 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 JDM601_3260 a1544ef8d38e3705500657066658f4cf 1118 PRINTS PR01228 Eggshell protein signature 287 297 2.2E-6 T 12-10-2018 JDM601_3260 a1544ef8d38e3705500657066658f4cf 1118 PRINTS PR01228 Eggshell protein signature 187 198 2.2E-6 T 12-10-2018 JDM601_3260 a1544ef8d38e3705500657066658f4cf 1118 PRINTS PR01228 Eggshell protein signature 261 276 2.2E-6 T 12-10-2018 JDM601_3260 a1544ef8d38e3705500657066658f4cf 1118 PRINTS PR01228 Eggshell protein signature 314 332 2.2E-6 T 12-10-2018 JDM601_1683 410a890ed13eef4763532e9535fc780b 154 Pfam PF06271 RDD family 38 130 1.9E-8 T 12-10-2018 IPR010432 RDD JDM601_1683 410a890ed13eef4763532e9535fc780b 154 PIRSF PIRSF021697 1 153 2.1E-54 T 12-10-2018 IPR016795 Uncharacterised conserved protein UCP021697, membrane JDM601_0375 4f50c187d30f304fcd7e9f9c7b6f5d2c 498 Gene3D G3DSA:3.30.70.1450 404 478 8.4E-14 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 JDM601_0375 4f50c187d30f304fcd7e9f9c7b6f5d2c 498 Gene3D G3DSA:1.20.1530.20 8 388 1.1E-20 T 12-10-2018 IPR038770 Sodium/solute symporter superfamily JDM601_0375 4f50c187d30f304fcd7e9f9c7b6f5d2c 498 Pfam PF02080 TrkA-C domain 414 476 2.3E-10 T 12-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 JDM601_0375 4f50c187d30f304fcd7e9f9c7b6f5d2c 498 Pfam PF00999 Sodium/hydrogen exchanger family 15 383 7.9E-51 T 12-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 JDM601_0375 4f50c187d30f304fcd7e9f9c7b6f5d2c 498 SUPERFAMILY SSF116726 408 475 1.02E-10 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 JDM601_0767 39e4415fbb09b9b36100481efa545273 220 Gene3D G3DSA:3.40.50.300 2 216 2.7E-24 T 12-10-2018 JDM601_3577 c1bf5035fb1d689a379b078c0bbb1a93 239 SUPERFAMILY SSF88713 32 142 3.81E-5 T 12-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 JDM601_3577 c1bf5035fb1d689a379b078c0bbb1a93 239 Pfam PF10096 Uncharacterized protein conserved in bacteria (DUF2334) 15 137 3.8E-15 T 12-10-2018 IPR018763 Protein of unknown function DUF2334 JDM601_0312 bafe1ef0d652517c9939b166498cbadb 208 Gene3D G3DSA:1.10.357.10 13 207 8.3E-25 T 12-10-2018 JDM601_0312 bafe1ef0d652517c9939b166498cbadb 208 Pfam PF00440 Bacterial regulatory proteins, tetR family 31 77 9.3E-9 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_0312 bafe1ef0d652517c9939b166498cbadb 208 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 31 44 5.0E-5 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_0312 bafe1ef0d652517c9939b166498cbadb 208 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 52 75 5.0E-5 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_0312 bafe1ef0d652517c9939b166498cbadb 208 SUPERFAMILY SSF46689 18 100 3.9E-16 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JDM601_3742 bf0d43f3891dc242ff2d2e50d7db9cda 209 Gene3D G3DSA:1.10.150.240 24 91 1.5E-41 T 12-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 JDM601_3742 bf0d43f3891dc242ff2d2e50d7db9cda 209 Gene3D G3DSA:3.40.50.1000 11 197 1.5E-41 T 12-10-2018 IPR023214 HAD superfamily JDM601_3742 bf0d43f3891dc242ff2d2e50d7db9cda 209 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 106 119 1.1E-14 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 JDM601_3742 bf0d43f3891dc242ff2d2e50d7db9cda 209 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 137 153 1.1E-14 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 JDM601_3742 bf0d43f3891dc242ff2d2e50d7db9cda 209 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 9 20 1.1E-14 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 JDM601_3742 bf0d43f3891dc242ff2d2e50d7db9cda 209 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 155 175 1.1E-14 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 JDM601_3742 bf0d43f3891dc242ff2d2e50d7db9cda 209 SUPERFAMILY SSF56784 9 198 3.61E-31 T 12-10-2018 IPR036412 HAD-like superfamily JDM601_3742 bf0d43f3891dc242ff2d2e50d7db9cda 209 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 89 188 1.1E-10 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 JDM601_3742 bf0d43f3891dc242ff2d2e50d7db9cda 209 Pfam PF13419 Haloacid dehalogenase-like hydrolase 96 188 6.2E-10 T 12-10-2018 JDM601_0053 00f24d6158a7260b7b7ca742a3580f51 95 ProDom PD065399 ESAT-6-LIKE ESAT-6 ORF3890C LIKE 1 95 4.0E-26 T 12-10-2018 IPR020167 ESAT-6-like protein EsxC JDM601_0053 00f24d6158a7260b7b7ca742a3580f51 95 SUPERFAMILY SSF140453 4 95 3.4E-13 T 12-10-2018 IPR036689 ESAT-6-like superfamily JDM601_0053 00f24d6158a7260b7b7ca742a3580f51 95 Gene3D G3DSA:1.10.287.1060 4 95 2.8E-9 T 12-10-2018 JDM601_0461 0d39a17147352347a6e9e346e574bac8 432 Pfam PF04286 Protein of unknown function (DUF445) 68 430 3.6E-102 T 12-10-2018 IPR007383 Protein of unknown function DUF445 JDM601_0631 e637855e14d19a61b0b72adf9e272502 508 Pfam PF02810 SEC-C motif 447 463 4.5E-10 T 12-10-2018 IPR004027 SEC-C motif JDM601_0631 e637855e14d19a61b0b72adf9e272502 508 SUPERFAMILY SSF103642 445 465 3.6E-8 T 12-10-2018 JDM601_0631 e637855e14d19a61b0b72adf9e272502 508 Gene3D G3DSA:3.10.450.50 429 465 2.5E-7 T 12-10-2018 JDM601_1006 822827abbfae8087f5e265bf83ec475d 259 Pfam PF13847 Methyltransferase domain 87 223 1.2E-27 T 12-10-2018 IPR025714 Methyltransferase domain JDM601_1006 822827abbfae8087f5e265bf83ec475d 259 Gene3D G3DSA:3.40.50.150 59 250 2.0E-48 T 12-10-2018 JDM601_1006 822827abbfae8087f5e265bf83ec475d 259 SUPERFAMILY SSF53335 74 236 8.7E-39 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JDM601_0979 216b8e3d73c655ad8c735ef946891bdb 114 TIGRFAM TIGR00014 arsC: arsenate reductase (glutaredoxin) 5 114 8.8E-44 T 12-10-2018 IPR006659 Arsenate reductase GO:0008794|GO:0055114 MetaCyc: PWY-4202|MetaCyc: PWY-4621 JDM601_0979 216b8e3d73c655ad8c735ef946891bdb 114 SUPERFAMILY SSF52833 5 114 1.24E-34 T 12-10-2018 IPR036249 Thioredoxin-like superfamily JDM601_0979 216b8e3d73c655ad8c735ef946891bdb 114 Pfam PF03960 ArsC family 7 113 4.1E-11 T 12-10-2018 IPR006660 Arsenate reductase-like JDM601_0979 216b8e3d73c655ad8c735ef946891bdb 114 Gene3D G3DSA:3.40.30.10 1 114 2.0E-46 T 12-10-2018 JDM601_4021 7fd0a9c7b8f992257df4d2c5b894af22 310 Gene3D G3DSA:3.30.2010.10 120 201 3.2E-6 T 12-10-2018 JDM601_4021 7fd0a9c7b8f992257df4d2c5b894af22 310 Pfam PF01435 Peptidase family M48 129 208 1.3E-12 T 12-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 JDM601_3020 01a7401dd7dc9019ab7acbede6fc48f8 93 ProDom PD020015 MB2016C IRON REGULATED MB3297 RV1993C/MT2049 RV0968/MT0996 IRP10 ML0748 MB0993 1 84 2.0E-27 T 12-10-2018 IPR009963 Protein of unknown function DUF1490 JDM601_3020 01a7401dd7dc9019ab7acbede6fc48f8 93 Pfam PF07371 Protein of unknown function (DUF1490) 1 86 9.2E-42 T 12-10-2018 IPR009963 Protein of unknown function DUF1490 JDM601_4016 669bd7b9541082a925a8c68f2dace3ac 161 Pfam PF16877 Domain of unknown function (DUF5078) 40 157 1.4E-62 T 12-10-2018 IPR031702 Protein of unknown function DUF5078 JDM601_2258 0b0ff7167698dc8d50a7c88b91d9a3c0 262 Pfam PF01061 ABC-2 type transporter 32 231 7.9E-12 T 12-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 JDM601_2258 0b0ff7167698dc8d50a7c88b91d9a3c0 262 TIGRFAM TIGR00025 Mtu_efflux: ABC transporter efflux protein, DrrB family 36 262 9.3E-57 T 12-10-2018 IPR004377 ABC transporter, permease protein DrrB/DrrC GO:0042891|GO:0043215|GO:0046677|GO:1900753 JDM601_2258 0b0ff7167698dc8d50a7c88b91d9a3c0 262 PIRSF PIRSF006648 6 260 5.7E-17 T 12-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 JDM601_2662 27ff1c02c13efb19511c110d79c29c3e 184 Pfam PF14232 Domain of unknown function (DUF4334) 123 177 9.6E-24 T 12-10-2018 IPR025568 Domain of unknown function DUF4334 JDM601_2662 27ff1c02c13efb19511c110d79c29c3e 184 Pfam PF14231 GXWXG protein 19 77 4.0E-26 T 12-10-2018 IPR025951 GXWXG domain JDM601_0588 05a362522dba35e13fdbee9891b9a258 120 Pfam PF13564 DoxX-like family 8 114 3.1E-19 T 12-10-2018 IPR032808 DoxX family JDM601_3238 9639328e07a658bba7b58cbff509e987 97 Gene3D G3DSA:2.30.33.40 1 97 2.1E-41 T 12-10-2018 IPR037124 GroES chaperonin superfamily GO:0005737|GO:0006457 JDM601_3238 9639328e07a658bba7b58cbff509e987 97 SUPERFAMILY SSF50129 2 96 6.12E-35 T 12-10-2018 IPR011032 GroES-like superfamily JDM601_3238 9639328e07a658bba7b58cbff509e987 97 Hamap MF_00580 10 kDa chaperonin [groS]. 2 96 25.62 T 12-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 JDM601_3238 9639328e07a658bba7b58cbff509e987 97 Pfam PF00166 Chaperonin 10 Kd subunit 2 95 1.3E-34 T 12-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 JDM601_3238 9639328e07a658bba7b58cbff509e987 97 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 12-10-2018 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 JDM601_3238 9639328e07a658bba7b58cbff509e987 97 SMART SM00883 2 95 4.7E-55 T 12-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 JDM601_3238 9639328e07a658bba7b58cbff509e987 97 PRINTS PR00297 10kDa chaperonin signature 3 18 3.4E-31 T 12-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 JDM601_3238 9639328e07a658bba7b58cbff509e987 97 PRINTS PR00297 10kDa chaperonin signature 82 95 3.4E-31 T 12-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 JDM601_3238 9639328e07a658bba7b58cbff509e987 97 PRINTS PR00297 10kDa chaperonin signature 25 46 3.4E-31 T 12-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 JDM601_3238 9639328e07a658bba7b58cbff509e987 97 PRINTS PR00297 10kDa chaperonin signature 61 73 3.4E-31 T 12-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 JDM601_2207 113867cd55e648d4abfd2e0e1aa199bd 168 Pfam PF10698 Protein of unknown function (DUF2505) 10 164 4.3E-40 T 12-10-2018 IPR019639 Protein of unknown function DUF2505 JDM601_2857 269f634411da0622019ab97dd9bfca0f 454 Pfam PF01636 Phosphotransferase enzyme family 27 249 9.3E-30 T 12-10-2018 IPR002575 Aminoglycoside phosphotransferase JDM601_2857 269f634411da0622019ab97dd9bfca0f 454 Gene3D G3DSA:3.90.1200.10 107 334 7.0E-42 T 12-10-2018 JDM601_2857 269f634411da0622019ab97dd9bfca0f 454 Gene3D G3DSA:3.30.200.20 3 106 1.2E-8 T 12-10-2018 JDM601_2857 269f634411da0622019ab97dd9bfca0f 454 SUPERFAMILY SSF56112 8 316 7.0E-46 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily JDM601_2735 b6a01243fe949591de85e8f98c809221 99 TIGRFAM TIGR00135 gatC: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit 4 95 5.9E-29 T 12-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 JDM601_2735 b6a01243fe949591de85e8f98c809221 99 Pfam PF02686 Glu-tRNAGln amidotransferase C subunit 20 91 1.7E-16 T 12-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 JDM601_2735 b6a01243fe949591de85e8f98c809221 99 Gene3D G3DSA:1.10.20.60 2 94 1.4E-23 T 12-10-2018 JDM601_2735 b6a01243fe949591de85e8f98c809221 99 Hamap MF_00122 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C [gatC]. 3 96 23.345 T 12-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 JDM601_2735 b6a01243fe949591de85e8f98c809221 99 SUPERFAMILY SSF141000 3 94 1.26E-26 T 12-10-2018 IPR036113 Glu-tRNAGln amidotransferase superfamily, subunit C GO:0006450 JDM601_2529 f35c98a5c9515f7c46800096ead190ab 305 Pfam PF00561 alpha/beta hydrolase fold 22 132 1.7E-19 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 JDM601_2529 f35c98a5c9515f7c46800096ead190ab 305 PRINTS PR00412 Epoxide hydrolase signature 28 46 1.0E-8 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 JDM601_2529 f35c98a5c9515f7c46800096ead190ab 305 PRINTS PR00412 Epoxide hydrolase signature 51 66 1.0E-8 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 JDM601_2529 f35c98a5c9515f7c46800096ead190ab 305 PRINTS PR00412 Epoxide hydrolase signature 264 286 1.0E-8 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 JDM601_2529 f35c98a5c9515f7c46800096ead190ab 305 PRINTS PR00412 Epoxide hydrolase signature 97 110 1.0E-8 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 JDM601_2529 f35c98a5c9515f7c46800096ead190ab 305 Gene3D G3DSA:3.40.50.1820 1 295 4.0E-43 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_2529 f35c98a5c9515f7c46800096ead190ab 305 SUPERFAMILY SSF53474 13 289 3.45E-39 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_2696 083d3674528c79a3dfa5b36fa558891a 420 Gene3D G3DSA:1.20.1250.20 4 197 2.4E-29 T 12-10-2018 JDM601_2696 083d3674528c79a3dfa5b36fa558891a 420 Gene3D G3DSA:1.20.1250.20 208 392 1.9E-20 T 12-10-2018 JDM601_2696 083d3674528c79a3dfa5b36fa558891a 420 SUPERFAMILY SSF103473 6 387 8.63E-54 T 12-10-2018 IPR036259 MFS transporter superfamily JDM601_2696 083d3674528c79a3dfa5b36fa558891a 420 Pfam PF07690 Major Facilitator Superfamily 19 356 3.4E-37 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 JDM601_1333 6ab254d627a684d75ad680490346d619 83 Pfam PF13376 Bacteriocin-protection, YdeI or OmpD-Associated 8 65 1.2E-17 T 12-10-2018 JDM601_3607 86ff39fd1da9e96a195b255ed31c971e 362 Gene3D G3DSA:3.40.50.720 2 109 3.4E-14 T 12-10-2018 JDM601_3607 86ff39fd1da9e96a195b255ed31c971e 362 SUPERFAMILY SSF51735 3 163 1.05E-13 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_3862 e2a7faf610d233170a25cef38159a44b 452 Gene3D G3DSA:3.90.1200.10 210 451 3.5E-97 T 12-10-2018 JDM601_3862 e2a7faf610d233170a25cef38159a44b 452 SUPERFAMILY SSF56112 139 430 3.5E-17 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily JDM601_3862 e2a7faf610d233170a25cef38159a44b 452 Pfam PF01636 Phosphotransferase enzyme family 246 390 1.8E-5 T 12-10-2018 IPR002575 Aminoglycoside phosphotransferase JDM601_1357 686e26b3410266f9eb01c7438f2980cc 348 PIRSF PIRSF031853 1 345 1.3E-87 T 12-10-2018 IPR016984 Uncharacterised conserved protein UCP031853 JDM601_1357 686e26b3410266f9eb01c7438f2980cc 348 Pfam PF04471 Restriction endonuclease 209 318 2.7E-16 T 12-10-2018 IPR007560 Restriction endonuclease type IV, Mrr GO:0003677|GO:0004519|GO:0009307 JDM601_1357 686e26b3410266f9eb01c7438f2980cc 348 SUPERFAMILY SSF52980 211 323 2.41E-9 T 12-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 JDM601_1779 39e41a9df97b4622f3279038e9a07721 160 Pfam PF13548 Domain of unknown function (DUF4126) 7 151 1.3E-7 T 12-10-2018 IPR025196 Domain of unknown function DUF4126 JDM601_3798 21686c61e4e7e88ed9b69d023653eeae 98 Pfam PF05305 Protein of unknown function (DUF732) 2 87 1.5E-7 T 12-10-2018 IPR007969 Domain of unknown function DUF732 JDM601_2990 81bea006a0f6ff26282c1d1f9ad04050 56 PRINTS PR00163 Rubredoxin signature 34 50 8.0E-6 T 12-10-2018 IPR024935 Rubredoxin domain GO:0005506 JDM601_2990 81bea006a0f6ff26282c1d1f9ad04050 56 PRINTS PR00163 Rubredoxin signature 4 20 8.0E-6 T 12-10-2018 IPR024935 Rubredoxin domain GO:0005506 JDM601_2990 81bea006a0f6ff26282c1d1f9ad04050 56 Pfam PF00301 Rubredoxin 5 51 2.5E-19 T 12-10-2018 IPR024935 Rubredoxin domain GO:0005506 JDM601_2990 81bea006a0f6ff26282c1d1f9ad04050 56 Gene3D G3DSA:2.20.28.10 2 56 8.3E-25 T 12-10-2018 JDM601_2990 81bea006a0f6ff26282c1d1f9ad04050 56 ProSitePatterns PS00202 Rubredoxin signature. 34 44 - T 12-10-2018 IPR018527 Rubredoxin, iron-binding site GO:0046872 JDM601_2990 81bea006a0f6ff26282c1d1f9ad04050 56 SUPERFAMILY SSF57802 2 48 1.59E-17 T 12-10-2018 JDM601_1471 3ad0c6b5c3feb315369bafcef597cade 419 Pfam PF00067 Cytochrome P450 92 392 9.0E-16 T 12-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_1471 3ad0c6b5c3feb315369bafcef597cade 419 Gene3D G3DSA:1.10.630.10 4 419 2.9E-120 T 12-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_1471 3ad0c6b5c3feb315369bafcef597cade 419 SUPERFAMILY SSF48264 56 419 1.44E-75 T 12-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 JDM601_1471 3ad0c6b5c3feb315369bafcef597cade 419 PRINTS PR00359 B-class P450 signature 341 356 7.5E-41 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_1471 3ad0c6b5c3feb315369bafcef597cade 419 PRINTS PR00359 B-class P450 signature 296 307 7.5E-41 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_1471 3ad0c6b5c3feb315369bafcef597cade 419 PRINTS PR00359 B-class P450 signature 363 372 7.5E-41 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_1471 3ad0c6b5c3feb315369bafcef597cade 419 PRINTS PR00359 B-class P450 signature 372 383 7.5E-41 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_1471 3ad0c6b5c3feb315369bafcef597cade 419 PRINTS PR00359 B-class P450 signature 169 184 7.5E-41 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_1471 3ad0c6b5c3feb315369bafcef597cade 419 PRINTS PR00359 B-class P450 signature 152 168 7.5E-41 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_1471 3ad0c6b5c3feb315369bafcef597cade 419 PRINTS PR00359 B-class P450 signature 105 116 7.5E-41 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_1471 3ad0c6b5c3feb315369bafcef597cade 419 PRINTS PR00359 B-class P450 signature 214 236 7.5E-41 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_1471 3ad0c6b5c3feb315369bafcef597cade 419 PRINTS PR00359 B-class P450 signature 313 340 7.5E-41 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 JDM601_2255 a4c380c162a36b00d859d0ca16379a84 280 Gene3D G3DSA:1.10.10.10 37 121 5.4E-11 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JDM601_2255 a4c380c162a36b00d859d0ca16379a84 280 SUPERFAMILY SSF46785 41 235 1.59E-28 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JDM601_2255 a4c380c162a36b00d859d0ca16379a84 280 Pfam PF13412 Winged helix-turn-helix DNA-binding 43 84 3.0E-6 T 12-10-2018 JDM601_0264 011903f116e2fce750fb09db78896f81 192 Gene3D G3DSA:3.10.180.10 9 190 2.3E-38 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase JDM601_0264 011903f116e2fce750fb09db78896f81 192 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 15 163 2.0E-22 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain JDM601_0264 011903f116e2fce750fb09db78896f81 192 SUPERFAMILY SSF54593 12 179 3.36E-30 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase JDM601_1940 5d06d9c4e98fd04f2ff9046d653229e2 312 Pfam PF01435 Peptidase family M48 140 211 7.7E-10 T 12-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 JDM601_4101 8a5c67be5dfb587b9ce9e98e2cf99d7d 619 Pfam PF12250 Arabinofuranosyltransferase N terminal 10 439 4.5E-172 T 12-10-2018 IPR020963 Arabinofuranosyltransferase AftA, N-terminal GO:0005886|GO:0016021|GO:0016757|GO:0044038 KEGG: 00572+2.4.2.46|MetaCyc: PWY-6397 JDM601_4101 8a5c67be5dfb587b9ce9e98e2cf99d7d 619 Pfam PF12249 Arabinofuranosyltransferase A C terminal 446 618 1.4E-72 T 12-10-2018 IPR020959 Arabinofuranosyltransferase AftA, C-terminal GO:0005886|GO:0016021|GO:0016757|GO:0044038 KEGG: 00572+2.4.2.46|MetaCyc: PWY-6397 JDM601_0804 06c0785518b04aca8dd65f0b967f70ea 295 Pfam PF11228 Protein of unknown function (DUF3027) 26 215 1.1E-78 T 12-10-2018 IPR021391 Protein of unknown function DUF3027 JDM601_4253 c5f98a87e44bfa4e470cf98053c9fa7b 315 Pfam PF07859 alpha/beta hydrolase fold 79 286 2.7E-68 T 12-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 JDM601_4253 c5f98a87e44bfa4e470cf98053c9fa7b 315 Gene3D G3DSA:3.40.50.1820 3 308 2.6E-91 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_4253 c5f98a87e44bfa4e470cf98053c9fa7b 315 SUPERFAMILY SSF53474 35 309 1.49E-70 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_2081 ef545cd3427e6f471d8e4c25bb66a96f 219 Gene3D G3DSA:3.40.50.150 37 214 4.2E-40 T 12-10-2018 JDM601_2081 ef545cd3427e6f471d8e4c25bb66a96f 219 SUPERFAMILY SSF53335 44 211 1.55E-37 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JDM601_2081 ef545cd3427e6f471d8e4c25bb66a96f 219 Pfam PF08241 Methyltransferase domain 62 158 2.0E-24 T 12-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 JDM601_0524 a3ae1ce8680c030a86ae39aa1f80d94d 205 SUPERFAMILY SSF52833 57 193 7.74E-27 T 12-10-2018 IPR036249 Thioredoxin-like superfamily JDM601_0524 a3ae1ce8680c030a86ae39aa1f80d94d 205 ProSitePatterns PS00194 Thioredoxin family active site. 79 97 - T 12-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 JDM601_0524 a3ae1ce8680c030a86ae39aa1f80d94d 205 Gene3D G3DSA:3.40.30.10 53 194 6.7E-32 T 12-10-2018 JDM601_0524 a3ae1ce8680c030a86ae39aa1f80d94d 205 Pfam PF00578 AhpC/TSA family 66 172 2.7E-18 T 12-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 JDM601_1260 7fc590d196cea1a68c6ad7111ee92f28 82 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 5 42 1.4E-6 T 12-10-2018 JDM601_1260 7fc590d196cea1a68c6ad7111ee92f28 82 SUPERFAMILY SSF143120 3 43 9.81E-8 T 12-10-2018 IPR036165 YefM-like superfamily JDM601_1260 7fc590d196cea1a68c6ad7111ee92f28 82 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 3 47 4.9E-9 T 12-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM JDM601_1260 7fc590d196cea1a68c6ad7111ee92f28 82 Gene3D G3DSA:3.40.1620.10 1 39 2.0E-6 T 12-10-2018 JDM601_0257 efb31c1c10dee412e0f55e0dbecf0b98 410 TIGRFAM TIGR02778 ligD_pol: DNA ligase D, polymerase domain 17 265 1.4E-64 T 12-10-2018 IPR014145 DNA ligase D, polymerase domain JDM601_0257 efb31c1c10dee412e0f55e0dbecf0b98 410 Gene3D G3DSA:3.90.920.30 31 307 1.0E-88 T 12-10-2018 JDM601_0332 9ecbe05bcd2f1a0a0b5ffb8983143a49 123 Pfam PF11255 Protein of unknown function (DUF3054) 11 113 4.5E-35 T 12-10-2018 IPR021414 Protein of unknown function DUF3054 JDM601_3290 772831d7182f6e6c065689de2ae92414 211 Pfam PF03055 Retinal pigment epithelial membrane protein 4 163 5.3E-19 T 12-10-2018 IPR004294 Carotenoid oxygenase GO:0016702|GO:0055114 JDM601_1845 f0dfda9591fc59c57400e7a54d051632 254 SUPERFAMILY SSF52540 17 232 9.65E-57 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_1845 f0dfda9591fc59c57400e7a54d051632 254 Pfam PF00005 ABC transporter 33 170 1.1E-28 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JDM601_1845 f0dfda9591fc59c57400e7a54d051632 254 Gene3D G3DSA:3.40.50.300 12 250 4.7E-62 T 12-10-2018 JDM601_1845 f0dfda9591fc59c57400e7a54d051632 254 SMART SM00382 42 234 7.6E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain JDM601_1845 f0dfda9591fc59c57400e7a54d051632 254 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JDM601_0921 c844a8a83e3817569ca96a8599d5dbe0 105 ProDom PD069409 MB2104 RV2078/MT2139 1 96 3.0E-15 T 12-10-2018 IPR022534 Protein of unknown function DUF2563 JDM601_0921 c844a8a83e3817569ca96a8599d5dbe0 105 Pfam PF10817 Protein of unknown function (DUF2563) 1 98 5.8E-26 T 12-10-2018 IPR022534 Protein of unknown function DUF2563 JDM601_0921 c844a8a83e3817569ca96a8599d5dbe0 105 Gene3D G3DSA:1.10.287.1060 1 97 1.8E-6 T 12-10-2018 JDM601_0907 0bb5df053ff58a3150e15ed193944c1e 345 SUPERFAMILY SSF53474 67 325 1.16E-42 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_0907 0bb5df053ff58a3150e15ed193944c1e 345 Pfam PF07859 alpha/beta hydrolase fold 103 304 4.7E-39 T 12-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 JDM601_0907 0bb5df053ff58a3150e15ed193944c1e 345 Gene3D G3DSA:3.40.50.1820 53 338 5.3E-58 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_0359 79eef5e0bb7d1e4b149bef254f1708dd 138 PIRSF PIRSF017349 1 137 7.8E-63 T 12-10-2018 IPR014487 Protein of unknown function DUF3151 JDM601_0359 79eef5e0bb7d1e4b149bef254f1708dd 138 Pfam PF11349 Protein of unknown function (DUF3151) 9 132 1.1E-57 T 12-10-2018 IPR014487 Protein of unknown function DUF3151 JDM601_0503 1930019250a363649d7fbb8177f66fd5 81 Gene3D G3DSA:3.40.30.10 1 79 6.0E-17 T 12-10-2018 JDM601_0503 1930019250a363649d7fbb8177f66fd5 81 Pfam PF05768 Glutaredoxin-like domain (DUF836) 1 78 1.0E-15 T 12-10-2018 IPR008554 Glutaredoxin-like JDM601_0503 1930019250a363649d7fbb8177f66fd5 81 SUPERFAMILY SSF52833 2 79 7.48E-12 T 12-10-2018 IPR036249 Thioredoxin-like superfamily JDM601_2177 9cc5d669cc88bb97947f793c717527ff 123 SUPERFAMILY SSF46955 1 101 1.61E-22 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily JDM601_2177 9cc5d669cc88bb97947f793c717527ff 123 SMART SM00422 1 64 4.1E-13 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 JDM601_2177 9cc5d669cc88bb97947f793c717527ff 123 Gene3D G3DSA:1.10.1660.10 1 114 2.0E-25 T 12-10-2018 JDM601_2177 9cc5d669cc88bb97947f793c717527ff 123 Pfam PF13411 MerR HTH family regulatory protein 1 61 2.1E-14 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 JDM601_3040 ce2d361494f96600bc41699ca597f951 84 Pfam PF13822 Acyl-CoA carboxylase epsilon subunit 18 69 3.2E-18 T 12-10-2018 IPR032716 Acyl-CoA carboxylase epsilon subunit JDM601_0465 78a6e86f534148f3b346321b332ec4f8 133 Pfam PF10783 Protein of unknown function (DUF2599) 27 127 2.3E-36 T 12-10-2018 IPR019719 Protein of unknown function DUF2599 JDM601_1004 9a99ba189c57dc911a402694d7ef75cc 101 Pfam PF05305 Protein of unknown function (DUF732) 6 100 8.9E-23 T 12-10-2018 IPR007969 Domain of unknown function DUF732 JDM601_3782 7283bbe65bdf4e8eb831cdd2bfb7d675 81 Gene3D G3DSA:3.40.50.1240 1 60 2.4E-6 T 12-10-2018 IPR029033 Histidine phosphatase superfamily JDM601_4024 10e2fc82fbc3cda0639b959d6947db12 301 PRINTS PR00412 Epoxide hydrolase signature 120 133 7.7E-18 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 JDM601_4024 10e2fc82fbc3cda0639b959d6947db12 301 PRINTS PR00412 Epoxide hydrolase signature 276 298 7.7E-18 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 JDM601_4024 10e2fc82fbc3cda0639b959d6947db12 301 PRINTS PR00412 Epoxide hydrolase signature 73 88 7.7E-18 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 JDM601_4024 10e2fc82fbc3cda0639b959d6947db12 301 PRINTS PR00412 Epoxide hydrolase signature 53 71 7.7E-18 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 JDM601_4024 10e2fc82fbc3cda0639b959d6947db12 301 SUPERFAMILY SSF53474 15 301 3.71E-55 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_4024 10e2fc82fbc3cda0639b959d6947db12 301 PRINTS PR00111 Alpha/beta hydrolase fold signature 120 133 2.2E-9 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 JDM601_4024 10e2fc82fbc3cda0639b959d6947db12 301 PRINTS PR00111 Alpha/beta hydrolase fold signature 134 147 2.2E-9 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 JDM601_4024 10e2fc82fbc3cda0639b959d6947db12 301 PRINTS PR00111 Alpha/beta hydrolase fold signature 73 88 2.2E-9 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 JDM601_4024 10e2fc82fbc3cda0639b959d6947db12 301 Gene3D G3DSA:3.40.50.1820 1 301 8.8E-80 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_4024 10e2fc82fbc3cda0639b959d6947db12 301 Pfam PF00561 alpha/beta hydrolase fold 48 166 2.1E-23 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 JDM601_3817 bade512904ef3a742088c62560c4357d 53 Gene3D G3DSA:3.40.50.720 1 53 1.1E-10 T 12-10-2018 JDM601_3817 bade512904ef3a742088c62560c4357d 53 SUPERFAMILY SSF51735 1 52 1.66E-9 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_3274 b104cb26fef88a57692dc170e833674f 396 Pfam PF08817 WXG100 protein secretion system (Wss), protein YukD 9 91 4.2E-17 T 12-10-2018 IPR024962 YukD-like JDM601_3274 b104cb26fef88a57692dc170e833674f 396 Gene3D G3DSA:3.10.20.90 6 93 6.5E-11 T 12-10-2018 JDM601_1605 4a75e6b0ed6fcc14ef2b870984d44ab8 254 Pfam PF08237 PE-PPE domain 81 157 1.8E-7 T 12-10-2018 IPR013228 PE-PPE, C-terminal JDM601_2498 015501b9be4a04a7492f5ef2c7668c20 449 Pfam PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain 5 253 4.8E-48 T 12-10-2018 IPR004255 O-acyltransferase, WSD1, N-terminal GO:0004144|GO:0045017 KEGG: 00073+2.3.1.20|KEGG: 00561+2.3.1.20 JDM601_2498 015501b9be4a04a7492f5ef2c7668c20 449 Pfam PF06974 Protein of unknown function (DUF1298) 286 426 9.2E-18 T 12-10-2018 IPR009721 O-acyltransferase WSD1, C-terminal GO:0004144 KEGG: 00073+2.3.1.20|KEGG: 00561+2.3.1.20 JDM601_2498 015501b9be4a04a7492f5ef2c7668c20 449 TIGRFAM TIGR02946 acyl_WS_DGAT: acyltransferase, WS/DGAT/MGAT 5 428 1.7E-95 T 12-10-2018 IPR014292 Acyltransferase, WS/DGAT/MGAT GO:0016746|GO:0045017 KEGG: 00073+2.3.1.20|KEGG: 00561+2.3.1.20 JDM601_0710 75900da6ab030dcf00a4f83f5ab4d357 268 Pfam PF02405 Permease MlaE 49 261 3.6E-56 T 12-10-2018 IPR030802 ABC transporter permease MalE GO:0043190 JDM601_4300 7e32e7f18b47b1e33d02c6f659380ae8 492 Pfam PF00144 Beta-lactamase 56 463 1.9E-57 T 12-10-2018 IPR001466 Beta-lactamase-related JDM601_4300 7e32e7f18b47b1e33d02c6f659380ae8 492 SUPERFAMILY SSF56601 45 467 1.67E-76 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like JDM601_4300 7e32e7f18b47b1e33d02c6f659380ae8 492 Gene3D G3DSA:3.40.710.10 36 480 4.3E-93 T 12-10-2018 JDM601_1853 69ed01a520f5667981c227f0c59433a2 393 Pfam PF12555 Thiamine pyrophosphokinase C terminal 334 384 3.1E-15 T 12-10-2018 IPR022215 Thiamine pyrophosphokinase C-terminal JDM601_1853 69ed01a520f5667981c227f0c59433a2 393 SUPERFAMILY SSF63999 180 308 3.01E-13 T 12-10-2018 IPR036759 Thiamin pyrophosphokinase, catalytic domain superfamily GO:0004788|GO:0005524|GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 JDM601_2059 7165d48a1e00c738c48f68df879d0d73 96 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 4 76 2.0E-21 T 12-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM JDM601_2059 7165d48a1e00c738c48f68df879d0d73 96 Gene3D G3DSA:3.40.1620.10 3 44 4.6E-17 T 12-10-2018 JDM601_2059 7165d48a1e00c738c48f68df879d0d73 96 SUPERFAMILY SSF143120 4 84 1.57E-21 T 12-10-2018 IPR036165 YefM-like superfamily JDM601_2059 7165d48a1e00c738c48f68df879d0d73 96 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 7 58 6.9E-20 T 12-10-2018 JDM601_2059 7165d48a1e00c738c48f68df879d0d73 96 Gene3D G3DSA:1.10.1220.170 45 96 1.0E-28 T 12-10-2018 JDM601_2817 19360463e63821a2a15e1573587b72fd 449 Pfam PF00823 PPE family 7 163 2.7E-56 T 12-10-2018 IPR000030 PPE family JDM601_2817 19360463e63821a2a15e1573587b72fd 449 SUPERFAMILY SSF140459 4 176 6.02E-58 T 12-10-2018 JDM601_2817 19360463e63821a2a15e1573587b72fd 449 Gene3D G3DSA:1.20.1260.20 4 177 8.4E-59 T 12-10-2018 IPR038332 PPE superfamily JDM601_3839 92e5a6a6c0e82cb2f0f24291a0e11339 496 SUPERFAMILY SSF56801 4 493 6.67E-99 T 12-10-2018 JDM601_3839 92e5a6a6c0e82cb2f0f24291a0e11339 496 Gene3D G3DSA:3.40.50.12780 2 394 3.2E-62 T 12-10-2018 JDM601_3839 92e5a6a6c0e82cb2f0f24291a0e11339 496 Pfam PF13193 AMP-binding enzyme C-terminal domain 411 477 6.2E-15 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain JDM601_3839 92e5a6a6c0e82cb2f0f24291a0e11339 496 Gene3D G3DSA:3.30.300.30 395 496 1.0E-24 T 12-10-2018 JDM601_3839 92e5a6a6c0e82cb2f0f24291a0e11339 496 Pfam PF00501 AMP-binding enzyme 18 398 8.4E-51 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 JDM601_1784 ea8d20aaa0a3242664b35165c66a88b4 181 ProDom PD033474 ANTIGEN PRECURSOR SIGNAL LIPOPROTEIN LOW WEIGHT MOLECULAR LPPK MEMBRANE PALMITATE 61 164 8.0E-32 T 12-10-2018 IPR020235 Low molecular weight antigen MTB12 JDM601_1858 62c1d676c123e46fa5b9ca53a1bc7284 273 SUPERFAMILY SSF53335 57 241 4.3E-34 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JDM601_1858 62c1d676c123e46fa5b9ca53a1bc7284 273 Pfam PF01596 O-methyltransferase 78 229 2.2E-14 T 12-10-2018 IPR002935 O-methyltransferase, family 3 GO:0008171 JDM601_1858 62c1d676c123e46fa5b9ca53a1bc7284 273 Gene3D G3DSA:3.40.50.150 53 273 6.9E-61 T 12-10-2018 JDM601_0104 ea388e061a649811ac2e49e802e4768c 210 Gene3D G3DSA:3.40.50.720 8 199 2.7E-13 T 12-10-2018 JDM601_0104 ea388e061a649811ac2e49e802e4768c 210 Pfam PF00106 short chain dehydrogenase 18 104 7.9E-11 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_0104 ea388e061a649811ac2e49e802e4768c 210 SUPERFAMILY SSF51735 18 172 4.26E-16 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_1069 00f9dac6a69256355c014a7cca1ce4ef 234 SUPERFAMILY SSF54001 18 228 1.37E-22 T 12-10-2018 IPR038765 Papain-like cysteine peptidase superfamily JDM601_1069 00f9dac6a69256355c014a7cca1ce4ef 234 Gene3D G3DSA:3.90.1720.10 8 137 7.3E-7 T 12-10-2018 JDM601_1750 a55f9ae4aafb9f0a2a03d0f77df6e4e7 266 Pfam PF10006 Uncharacterized conserved protein (DUF2249) 196 265 5.7E-24 T 12-10-2018 IPR018720 Domain of unknown function DUF2249 JDM601_4327 76116bb502e28e97cc6a5a726f32bdbf 433 SUPERFAMILY SSF103473 51 420 1.44E-19 T 12-10-2018 IPR036259 MFS transporter superfamily JDM601_4327 76116bb502e28e97cc6a5a726f32bdbf 433 Pfam PF07690 Major Facilitator Superfamily 46 379 3.8E-14 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 JDM601_4327 76116bb502e28e97cc6a5a726f32bdbf 433 Gene3D G3DSA:1.20.1250.20 27 414 1.2E-19 T 12-10-2018 JDM601_0439 8bfe104e61de50f76393dff907609ded 169 Gene3D G3DSA:1.20.120.450 3 169 1.5E-60 T 12-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes JDM601_0439 8bfe104e61de50f76393dff907609ded 169 Pfam PF04978 Protein of unknown function (DUF664) 10 167 7.5E-30 T 12-10-2018 IPR007061 Protein of unknown function DUF664 JDM601_0439 8bfe104e61de50f76393dff907609ded 169 SUPERFAMILY SSF109854 8 167 3.05E-29 T 12-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes JDM601_2405 9f129291fbcbd3766bfed96b244e4c0e 230 SUPERFAMILY SSF46785 5 174 2.04E-14 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JDM601_2405 9f129291fbcbd3766bfed96b244e4c0e 230 Gene3D G3DSA:1.10.10.10 2 72 1.3E-7 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JDM601_2405 9f129291fbcbd3766bfed96b244e4c0e 230 Pfam PF09339 IclR helix-turn-helix domain 3 39 4.4E-6 T 12-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 JDM601_2902 9cb9e5ddb1fc5b934c878ea9070034bd 305 Pfam PF09995 Uncharacterized protein conserved in bacteria (DUF2236) 49 268 9.0E-50 T 12-10-2018 IPR018713 Domain of unknown function DUF2236 JDM601_3733 5065e77a7b04ad0605892956f0f5016d 377 Gene3D G3DSA:3.40.309.10 147 338 6.3E-129 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 JDM601_3733 5065e77a7b04ad0605892956f0f5016d 377 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 143 150 - T 12-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 JDM601_3733 5065e77a7b04ad0605892956f0f5016d 377 Gene3D G3DSA:3.40.605.10 29 367 6.3E-129 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 JDM601_3733 5065e77a7b04ad0605892956f0f5016d 377 Pfam PF00171 Aldehyde dehydrogenase family 23 369 2.7E-122 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 JDM601_3733 5065e77a7b04ad0605892956f0f5016d 377 SUPERFAMILY SSF53720 8 371 2.49E-115 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 JDM601_0557 248ccdffeb898c0c0506947382f73e1f 512 Pfam PF00916 Sulfate permease family 22 377 8.1E-70 T 12-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 JDM601_1957 8a862b758a7af0ec310eef2573c62e65 211 Gene3D G3DSA:1.10.340.30 31 151 2.0E-8 T 12-10-2018 JDM601_1957 8a862b758a7af0ec310eef2573c62e65 211 SUPERFAMILY SSF48150 24 153 7.33E-8 T 12-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 JDM601_1908 3f91f4751a5bea4773ef178688b7d853 401 Gene3D G3DSA:1.20.1260.20 1 174 1.2E-66 T 12-10-2018 IPR038332 PPE superfamily JDM601_1908 3f91f4751a5bea4773ef178688b7d853 401 Pfam PF12484 Polymorphic PE/PPE proteins C terminal 315 397 6.3E-22 T 12-10-2018 IPR022171 PPE family, C-terminal JDM601_1908 3f91f4751a5bea4773ef178688b7d853 401 Pfam PF00823 PPE family 5 161 2.5E-60 T 12-10-2018 IPR000030 PPE family JDM601_1908 3f91f4751a5bea4773ef178688b7d853 401 SUPERFAMILY SSF140459 2 171 3.92E-61 T 12-10-2018 JDM601_4251 aa445bb20ce63985e0ad7234b9571bfb 451 SUPERFAMILY SSF56425 265 376 7.67E-20 T 12-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 JDM601_4251 aa445bb20ce63985e0ad7234b9571bfb 451 Pfam PF00890 FAD binding domain 2 431 9.1E-37 T 12-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 JDM601_4251 aa445bb20ce63985e0ad7234b9571bfb 451 Gene3D G3DSA:3.90.700.10 259 384 5.1E-147 T 12-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 JDM601_4251 aa445bb20ce63985e0ad7234b9571bfb 451 Gene3D G3DSA:3.50.50.60 1 445 5.1E-147 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_4251 aa445bb20ce63985e0ad7234b9571bfb 451 SUPERFAMILY SSF51905 2 450 6.49E-32 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_2868 db71a466067a5719f67fbad412888ce6 281 Pfam PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 32 186 3.9E-30 T 12-10-2018 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 JDM601_2868 db71a466067a5719f67fbad412888ce6 281 Gene3D G3DSA:1.20.120.1200 19 189 3.7E-37 T 12-10-2018 JDM601_0407 60eac1622f712311c1a43b0533e121a8 356 Gene3D G3DSA:3.30.590.20 1 354 5.8E-100 T 12-10-2018 JDM601_0407 60eac1622f712311c1a43b0533e121a8 356 SUPERFAMILY SSF55931 1 352 1.47E-111 T 12-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 JDM601_0407 60eac1622f712311c1a43b0533e121a8 356 Pfam PF04107 Glutamate-cysteine ligase family 2(GCS2) 1 276 4.9E-84 T 12-10-2018 IPR006336 Glutamate--cysteine ligase, GCS2 GO:0004357|GO:0042398 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 JDM601_0407 60eac1622f712311c1a43b0533e121a8 356 TIGRFAM TIGR02050 gshA_cyan_rel: carboxylate-amine ligase, YbdK family 1 281 9.2E-112 T 12-10-2018 IPR011793 Putative glutamate--cysteine ligase YbdK GO:0016879 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 JDM601_0407 60eac1622f712311c1a43b0533e121a8 356 Hamap MF_01609 Glutamate--cysteine ligase [gshA]. 1 356 101.378 T 12-10-2018 IPR011793 Putative glutamate--cysteine ligase YbdK GO:0016879 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 JDM601_0790 3542dcc03c51ce5359a305780fd97e35 767 Pfam PF13625 Helicase conserved C-terminal domain 491 612 2.5E-37 T 12-10-2018 IPR032830 Helicase XPB/Ssl2, N-terminal domain Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167246|Reactome: R-HSA-427413|Reactome: R-HSA-5696395|Reactome: R-HSA-5696400|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-72086|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73863|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-77075 JDM601_2932 fc3b35901bf4ac554abc659301542872 84 Pfam PF02467 Transcription factor WhiB 3 71 4.2E-27 T 12-10-2018 IPR034768 WhiB-like iron-sulfur binding domain JDM601_2932 fc3b35901bf4ac554abc659301542872 84 Hamap MF_01479 Transcriptional regulator WhiB [whiB]. 1 76 18.741 T 12-10-2018 IPR003482 Transcription factor WhiB JDM601_2683 cb52143356196b80c6bfbf6198b27bb6 181 Pfam PF12028 Protein of unknown function (DUF3515) 21 174 4.8E-56 T 12-10-2018 IPR021903 Protein of unknown function DUF3515 JDM601_2859 0d94bab603e6d9f3f7dc527662024bf9 125 Hamap MF_01394 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic [ndhC]. 1 125 17.451 T 12-10-2018 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid GO:0016651|GO:0055114 JDM601_2859 0d94bab603e6d9f3f7dc527662024bf9 125 Gene3D G3DSA:1.20.58.1610 1 125 1.1E-40 T 12-10-2018 IPR038430 NADH:ubiquinone oxidoreductase, subunit 3 superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 JDM601_2859 0d94bab603e6d9f3f7dc527662024bf9 125 Pfam PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 19 124 5.6E-35 T 12-10-2018 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 JDM601_2154 ffce4505081924900d88610e98e2a9c5 218 Pfam PF10821 Protein of unknown function (DUF2567) 29 193 1.6E-74 T 12-10-2018 IPR021213 Protein of unknown function DUF2567 JDM601_2768 b7edf6623f633ba4eb3ac6dac6ee2743 284 Gene3D G3DSA:3.40.50.300 9 272 2.0E-54 T 12-10-2018 JDM601_2768 b7edf6623f633ba4eb3ac6dac6ee2743 284 Pfam PF00005 ABC transporter 37 185 7.3E-24 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JDM601_2768 b7edf6623f633ba4eb3ac6dac6ee2743 284 SUPERFAMILY SSF52540 14 251 4.83E-45 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_2768 b7edf6623f633ba4eb3ac6dac6ee2743 284 SMART SM00382 43 244 1.1E-5 T 12-10-2018 IPR003593 AAA+ ATPase domain JDM601_0246 8a03cbc19de701f3646a141c00f7a58d 407 Pfam PF05982 Na+-dependent bicarbonate transporter superfamily 16 398 1.6E-105 T 12-10-2018 IPR010293 Na+-dependent bicarbonate transporter superfamily JDM601_1623 70bc305d76e5349f44887e376fe532cc 236 Gene3D G3DSA:1.25.40.20 20 158 7.9E-7 T 12-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily JDM601_1623 70bc305d76e5349f44887e376fe532cc 236 SUPERFAMILY SSF48403 68 115 5.91E-6 T 12-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily JDM601_1854 954b29978e2ae280d847602c751d2850 313 Pfam PF11382 Copper transport outer membrane protein, MctB 1 310 3.1E-93 T 12-10-2018 IPR021522 Copper transporter MctB GO:0016020|GO:0055070 JDM601_3276 184c643da61625e7294f7b28fcc93f21 220 Pfam PF01083 Cutinase 24 205 2.0E-47 T 12-10-2018 IPR000675 Cutinase/acetylxylan esterase GO:0016787 JDM601_3276 184c643da61625e7294f7b28fcc93f21 220 SMART SM01110 22 206 2.2E-77 T 12-10-2018 IPR000675 Cutinase/acetylxylan esterase GO:0016787 JDM601_3276 184c643da61625e7294f7b28fcc93f21 220 ProSitePatterns PS00155 Cutinase, serine active site. 95 107 - T 12-10-2018 IPR011150 Cutinase, monofunctional GO:0005576|GO:0050525 JDM601_3276 184c643da61625e7294f7b28fcc93f21 220 SUPERFAMILY SSF53474 16 208 5.36E-35 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_3276 184c643da61625e7294f7b28fcc93f21 220 Gene3D G3DSA:3.40.50.1820 13 211 1.3E-46 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_2838 5929d16f472fb5c842b84a289d2dd8c4 296 Gene3D G3DSA:1.10.287.1060 1 93 4.7E-10 T 12-10-2018 JDM601_2838 5929d16f472fb5c842b84a289d2dd8c4 296 SUPERFAMILY SSF140453 8 92 1.96E-5 T 12-10-2018 IPR036689 ESAT-6-like superfamily JDM601_3389 ea19dfac6a776a3cc9e93a88268bc87b 279 SUPERFAMILY SSF51556 24 270 2.51E-50 T 12-10-2018 IPR032466 Metal-dependent hydrolase JDM601_3389 ea19dfac6a776a3cc9e93a88268bc87b 279 Pfam PF04909 Amidohydrolase 38 269 4.9E-35 T 12-10-2018 IPR006680 Amidohydrolase-related GO:0016787 JDM601_3389 ea19dfac6a776a3cc9e93a88268bc87b 279 Gene3D G3DSA:3.20.20.140 3 270 9.5E-56 T 12-10-2018 JDM601_4256 f3d7e5d2fd7b2e6cd0de4e6863034829 212 SMART SM00886 98 195 3.0E-17 T 12-10-2018 IPR013097 Stress responsive alpha-beta barrel JDM601_4256 f3d7e5d2fd7b2e6cd0de4e6863034829 212 Gene3D G3DSA:3.30.70.100 95 194 1.0E-7 T 12-10-2018 JDM601_4256 f3d7e5d2fd7b2e6cd0de4e6863034829 212 Pfam PF07876 Stress responsive A/B Barrel Domain 98 194 9.7E-15 T 12-10-2018 IPR013097 Stress responsive alpha-beta barrel JDM601_4256 f3d7e5d2fd7b2e6cd0de4e6863034829 212 SUPERFAMILY SSF54909 97 200 2.32E-16 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel JDM601_3118 5a870a1983850c5bb5001d7f973ac477 207 Gene3D G3DSA:1.10.10.10 70 206 3.5E-7 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily JDM601_3118 5a870a1983850c5bb5001d7f973ac477 207 SUPERFAMILY SSF46785 123 199 3.53E-7 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily JDM601_2308 790aa22051e0f1c8183c712ac0be079b 105 PIRSF PIRSF002134 36 103 0.0023 T 12-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 JDM601_2308 790aa22051e0f1c8183c712ac0be079b 105 Gene3D G3DSA:1.10.8.50 1 105 2.7E-44 T 12-10-2018 JDM601_2308 790aa22051e0f1c8183c712ac0be079b 105 SUPERFAMILY SSF46946 54 101 3.3E-5 T 12-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 JDM601_0467 eeaa8def9aa01dc8672185879506660d 255 Pfam PF11209 Protein of unknown function (DUF2993) 33 236 3.3E-22 T 12-10-2018 IPR021373 Protein of unknown function DUF2993 JDM601_0977 20dc35024fa1ccf1f1afc774dfe0186b 110 Gene3D G3DSA:1.20.20.20 19 109 8.2E-26 T 12-10-2018 IPR038378 Haemophore, haem-binding domain superfamily JDM601_0977 20dc35024fa1ccf1f1afc774dfe0186b 110 Pfam PF16525 Haemophore, haem-binding 23 99 2.0E-29 T 12-10-2018 IPR032407 Haemophore, haem-binding GO:0020037 JDM601_0977 20dc35024fa1ccf1f1afc774dfe0186b 110 TIGRFAM TIGR04529 MTB_hemophore: hemophore-related protein, Rv0203/Rv1174c family 25 100 5.0E-23 T 12-10-2018 IPR032407 Haemophore, haem-binding GO:0020037 JDM601_4197 b4ac40db4c5297b9cfe80081c1e15607 394 SUPERFAMILY SSF51905 1 362 1.92E-20 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_4197 b4ac40db4c5297b9cfe80081c1e15607 394 Gene3D G3DSA:3.50.50.60 1 339 1.0E-14 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_1047 90bca37c2112df00831f706bebdf47d2 317 Pfam PF09995 Uncharacterized protein conserved in bacteria (DUF2236) 28 274 4.8E-29 T 12-10-2018 IPR018713 Domain of unknown function DUF2236 JDM601_1866 7080d29fb4b3e72fdf1c9a9338101dbf 260 Pfam PF01925 Sulfite exporter TauE/SafE 10 252 3.6E-41 T 12-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 JDM601_3650 b787023226e8357a9c6dcd032e46cba9 348 SUPERFAMILY SSF51735 1 318 2.04E-49 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_3650 b787023226e8357a9c6dcd032e46cba9 348 Gene3D G3DSA:3.40.50.720 1 325 1.3E-69 T 12-10-2018 JDM601_3650 b787023226e8357a9c6dcd032e46cba9 348 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 230 9.5E-22 T 12-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 JDM601_0269 6bba5f11216d3b1bfb42955f94c5324b 72 Pfam PF11160 Protein of unknown function (DUF2945) 9 69 7.1E-28 T 12-10-2018 IPR021331 Protein of unknown function DUF2945 JDM601_3912 fc41a52beff2c0b85c7f24709875ca3c 228 SUPERFAMILY SSF48498 85 220 2.87E-27 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily JDM601_3912 fc41a52beff2c0b85c7f24709875ca3c 228 Gene3D G3DSA:1.10.357.10 1 227 9.7E-85 T 12-10-2018 JDM601_3912 fc41a52beff2c0b85c7f24709875ca3c 228 SUPERFAMILY SSF46689 4 76 3.36E-12 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JDM601_3912 fc41a52beff2c0b85c7f24709875ca3c 228 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 58 1.7E-5 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_1090 242e6bad71918435ecbb67a574c0b527 350 SUPERFAMILY SSF51735 2 154 1.29E-13 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_1090 242e6bad71918435ecbb67a574c0b527 350 Gene3D G3DSA:3.40.50.720 1 128 6.0E-17 T 12-10-2018 JDM601_2196 5b288a3cfd609b5703fb5c9001504cfe 361 SUPERFAMILY SSF47240 109 253 1.96E-6 T 12-10-2018 IPR009078 Ferritin-like superfamily JDM601_2196 5b288a3cfd609b5703fb5c9001504cfe 361 Pfam PF11583 P-aminobenzoate N-oxygenase AurF 40 323 1.1E-97 T 12-10-2018 IPR025859 P-aminobenzoate N-oxygenase AurF JDM601_0055 853e99f6dda20ade23272f24b57c7296 397 SUPERFAMILY SSF140459 6 175 5.23E-26 T 12-10-2018 JDM601_0055 853e99f6dda20ade23272f24b57c7296 397 Pfam PF00823 PPE family 8 166 1.5E-22 T 12-10-2018 IPR000030 PPE family JDM601_0055 853e99f6dda20ade23272f24b57c7296 397 Gene3D G3DSA:1.20.1260.20 5 178 5.2E-21 T 12-10-2018 IPR038332 PPE superfamily JDM601_1939 0d847f554ecd5ca90aa45355399a0c01 294 Pfam PF12697 Alpha/beta hydrolase family 42 287 2.2E-17 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 JDM601_1939 0d847f554ecd5ca90aa45355399a0c01 294 Gene3D G3DSA:3.40.50.1820 7 294 6.6E-39 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_1939 0d847f554ecd5ca90aa45355399a0c01 294 SUPERFAMILY SSF53474 22 293 1.18E-40 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_3989 8892df0c9915f9f4aa0ef7995e58e462 375 Pfam PF13810 Domain of unknown function (DUF4185) 47 360 9.3E-52 T 12-10-2018 IPR025442 Domain of unknown function DUF4185 JDM601_2032 d87e424215e5524bee5b94738e9eb454 149 Pfam PF13564 DoxX-like family 35 112 5.7E-6 T 12-10-2018 IPR032808 DoxX family JDM601_3969 bc18a7defe86250f9638b20bd2660ab0 202 Pfam PF13559 Domain of unknown function (DUF4129) 121 186 6.3E-13 T 12-10-2018 IPR025403 Domain of unknown function DUF4129 JDM601_2206 ff30dac33379c85efc445785701c7fe2 240 Gene3D G3DSA:3.40.109.10 17 227 8.2E-40 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 JDM601_2206 ff30dac33379c85efc445785701c7fe2 240 SUPERFAMILY SSF55469 24 234 5.76E-41 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 JDM601_2206 ff30dac33379c85efc445785701c7fe2 240 Pfam PF00881 Nitroreductase family 33 210 1.5E-23 T 12-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 JDM601_2869 e65589bf47b20d73aba7f16b5b6fe3de 99 Hamap MF_01456 NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic [ndhE]. 1 99 19.476 T 12-10-2018 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 JDM601_2869 e65589bf47b20d73aba7f16b5b6fe3de 99 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 6 93 8.1E-23 T 12-10-2018 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like JDM601_2192 9b941007a7ad2c1c1e67410401f04fdb 160 Pfam PF01814 Hemerythrin HHE cation binding domain 9 128 1.3E-13 T 12-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 JDM601_2192 9b941007a7ad2c1c1e67410401f04fdb 160 Gene3D G3DSA:1.20.120.520 9 148 5.9E-15 T 12-10-2018 JDM601_2633 82f4587359bc7f65872704aaded516a8 292 Gene3D G3DSA:3.40.710.10 27 291 2.9E-81 T 12-10-2018 JDM601_2633 82f4587359bc7f65872704aaded516a8 292 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 43 258 3.3E-32 T 12-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 JDM601_2633 82f4587359bc7f65872704aaded516a8 292 SUPERFAMILY SSF56601 2 282 6.6E-59 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like JDM601_2633 82f4587359bc7f65872704aaded516a8 292 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 69 80 2.2E-10 T 12-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 JDM601_2633 82f4587359bc7f65872704aaded516a8 292 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 143 156 2.2E-10 T 12-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 JDM601_2633 82f4587359bc7f65872704aaded516a8 292 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 117 134 2.2E-10 T 12-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 JDM601_1703 7848999dcbb383b2c248513f78a655ac 139 PIRSF PIRSF017385 1 139 2.3E-52 T 12-10-2018 IPR021050 Cytochrome c oxidase subunit IV, actinobacteria GO:0004129|GO:0016021|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 JDM601_1703 7848999dcbb383b2c248513f78a655ac 139 Pfam PF12270 Cytochrome c oxidase subunit IV 1 137 5.8E-51 T 12-10-2018 IPR021050 Cytochrome c oxidase subunit IV, actinobacteria GO:0004129|GO:0016021|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 JDM601_2585 0bc6ca5d51fef086af05658d0d692925 190 Pfam PF08044 Domain of unknown function (DUF1707) 9 61 1.2E-16 T 12-10-2018 IPR012551 Protein of unknown function DUF1707 JDM601_0985 c8f915db19824c798492b83f306dea62 501 Gene3D G3DSA:1.20.1260.20 5 178 8.6E-60 T 12-10-2018 IPR038332 PPE superfamily JDM601_0985 c8f915db19824c798492b83f306dea62 501 SUPERFAMILY SSF140459 5 177 4.18E-58 T 12-10-2018 JDM601_0985 c8f915db19824c798492b83f306dea62 501 Pfam PF00823 PPE family 8 164 3.2E-58 T 12-10-2018 IPR000030 PPE family JDM601_1426 d5e4853bbb2d325231d62153f2876c0f 669 Pfam PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) 385 629 1.6E-82 T 12-10-2018 IPR019108 Cytochrome c oxidase caa3-type, assembly factor CtaG-related JDM601_1426 d5e4853bbb2d325231d62153f2876c0f 669 Pfam PF05425 Copper resistance protein D 236 333 2.8E-19 T 12-10-2018 IPR008457 Copper resistance protein D GO:0016021 JDM601_0930 eb4727c89ebf4841f9ce1d6ed1f581f6 548 Pfam PF07287 Acyclic terpene utilisation family protein AtuA 1 312 1.3E-120 T 12-10-2018 IPR010839 Acyclic terpene utilisation JDM601_2089 fdc10198b44256aa0d8f176fe5d74b6e 230 SUPERFAMILY SSF52540 21 207 3.0E-14 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_2089 fdc10198b44256aa0d8f176fe5d74b6e 230 Pfam PF00005 ABC transporter 21 68 6.0E-6 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JDM601_2089 fdc10198b44256aa0d8f176fe5d74b6e 230 Gene3D G3DSA:3.40.50.300 2 227 1.2E-13 T 12-10-2018 JDM601_2089 fdc10198b44256aa0d8f176fe5d74b6e 230 SMART SM00382 27 217 0.0032 T 12-10-2018 IPR003593 AAA+ ATPase domain JDM601_2047 9711a863f02a7e7488b5d717eca3027c 244 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 242 1.0E-56 T 12-10-2018 JDM601_2047 9711a863f02a7e7488b5d717eca3027c 244 SUPERFAMILY SSF51735 5 243 1.65E-75 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_2047 9711a863f02a7e7488b5d717eca3027c 244 Gene3D G3DSA:3.40.50.720 1 244 4.4E-74 T 12-10-2018 JDM601_2047 9711a863f02a7e7488b5d717eca3027c 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 150 169 2.0E-29 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2047 9711a863f02a7e7488b5d717eca3027c 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 124 140 2.0E-29 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2047 9711a863f02a7e7488b5d717eca3027c 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 2.0E-29 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2047 9711a863f02a7e7488b5d717eca3027c 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 205 225 2.0E-29 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2047 9711a863f02a7e7488b5d717eca3027c 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 188 2.0E-29 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_2047 9711a863f02a7e7488b5d717eca3027c 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 2.0E-29 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR JDM601_1648 c9c85aeceb36836ae9cb8c34b81ff6ea 473 Gene3D G3DSA:3.90.226.10 1 217 9.7E-63 T 12-10-2018 JDM601_1648 c9c85aeceb36836ae9cb8c34b81ff6ea 473 SUPERFAMILY SSF52096 14 210 1.47E-45 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily JDM601_1648 c9c85aeceb36836ae9cb8c34b81ff6ea 473 SUPERFAMILY SSF52096 184 458 1.59E-70 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily JDM601_1648 c9c85aeceb36836ae9cb8c34b81ff6ea 473 Pfam PF01039 Carboxyl transferase domain 38 459 3.0E-121 T 12-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 JDM601_2533 6748bd3792bbb6efc11974d24829834b 341 Gene3D G3DSA:3.20.20.70 5 341 9.6E-95 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JDM601_2533 6748bd3792bbb6efc11974d24829834b 341 SUPERFAMILY SSF51412 7 292 1.27E-44 T 12-10-2018 JDM601_2533 6748bd3792bbb6efc11974d24829834b 341 Pfam PF03060 Nitronate monooxygenase 11 339 2.7E-90 T 12-10-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 JDM601_3628 60e6ef97ff2930ab3368a08515370666 327 PRINTS PR01782 Mycobacterial cell entry (MCE) protein signature 66 82 5.0E-17 T 12-10-2018 IPR005693 Virulence factor Mce protein JDM601_3628 60e6ef97ff2930ab3368a08515370666 327 PRINTS PR01782 Mycobacterial cell entry (MCE) protein signature 3 23 5.0E-17 T 12-10-2018 IPR005693 Virulence factor Mce protein JDM601_3628 60e6ef97ff2930ab3368a08515370666 327 PRINTS PR01782 Mycobacterial cell entry (MCE) protein signature 150 168 5.0E-17 T 12-10-2018 IPR005693 Virulence factor Mce protein JDM601_3628 60e6ef97ff2930ab3368a08515370666 327 PRINTS PR01782 Mycobacterial cell entry (MCE) protein signature 270 289 5.0E-17 T 12-10-2018 IPR005693 Virulence factor Mce protein JDM601_3628 60e6ef97ff2930ab3368a08515370666 327 Pfam PF02470 MlaD protein 14 88 6.0E-15 T 12-10-2018 IPR003399 Mce/MlaD JDM601_3628 60e6ef97ff2930ab3368a08515370666 327 TIGRFAM TIGR00996 Mtu_fam_mce: virulence factor Mce family protein 3 266 2.6E-68 T 12-10-2018 IPR005693 Virulence factor Mce protein JDM601_0434 6b49e400b8d14a7b29543399e3fe6488 129 ProDom PD086639 PYRIDOXAMINE 5'-PHOSPHATE MB0449C OXIDASE-RELATED RV0441C/MT0457 8 108 2.0E-18 T 12-10-2018 IPR020145 Uncharacterised protein family, MT0457 JDM601_0326 3dcae721354e9c19c02a74ff8f290d98 119 Gene3D G3DSA:3.10.450.50 1 99 6.9E-6 T 12-10-2018 JDM601_0326 3dcae721354e9c19c02a74ff8f290d98 119 SUPERFAMILY SSF54427 1 89 2.76E-9 T 12-10-2018 IPR032710 NTF2-like domain superfamily JDM601_0326 3dcae721354e9c19c02a74ff8f290d98 119 Pfam PF12680 SnoaL-like domain 9 99 2.1E-6 T 12-10-2018 IPR037401 SnoaL-like domain JDM601_2658 0c823a1fbafba76656dc795023aa3bab 204 Pfam PF02620 Uncharacterized ACR, COG1399 73 186 4.3E-28 T 12-10-2018 IPR003772 Large ribosomal RNA subunit accumulation protein YceD JDM601_1338 fcfd79557d24732bbf409cec7f944a31 198 Pfam PF09438 Domain of unknown function (DUF2017) 12 193 5.0E-60 T 12-10-2018 IPR018561 Domain of unknown function DUF2017 JDM601_3710 3f8fb755e6b027f22bf749b8632e859e 219 Pfam PF05988 Bacterial protein of unknown function (DUF899) 1 197 4.4E-58 T 12-10-2018 IPR010296 Protein of unknown function DUF899, thioredoxin-like JDM601_4014 84156f7aa0945d3429680978af7d9ade 439 Pfam PF10774 Domain of unknown function (DUF4226) 4 113 3.0E-39 T 12-10-2018 IPR019710 Protein of unknown function DUF4226 JDM601_1780 ca3a995c008bd5a55cc3f6b7f1506f90 114 Pfam PF12705 PD-(D/E)XK nuclease superfamily 10 96 1.8E-6 T 12-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type JDM601_0179 0af168b54945c4081b944b302b1b382b 347 Gene3D G3DSA:3.50.50.60 4 317 1.8E-11 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_0179 0af168b54945c4081b944b302b1b382b 347 SUPERFAMILY SSF51905 5 216 1.64E-13 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_0179 0af168b54945c4081b944b302b1b382b 347 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 139 157 1.5E-6 T 12-10-2018 JDM601_0179 0af168b54945c4081b944b302b1b382b 347 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 1.5E-6 T 12-10-2018 JDM601_0179 0af168b54945c4081b944b302b1b382b 347 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 289 311 1.5E-6 T 12-10-2018 JDM601_0179 0af168b54945c4081b944b302b1b382b 347 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 191 1.6E-6 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JDM601_2464 5a250a338db80e65ac043af3a1878479 636 Pfam PF08310 LGFP repeat 278 333 3.6E-6 T 12-10-2018 IPR013207 LGFP JDM601_2464 5a250a338db80e65ac043af3a1878479 636 Pfam PF08310 LGFP repeat 225 275 2.9E-8 T 12-10-2018 IPR013207 LGFP JDM601_2464 5a250a338db80e65ac043af3a1878479 636 Pfam PF08310 LGFP repeat 335 367 1.1E-4 T 12-10-2018 IPR013207 LGFP JDM601_2464 5a250a338db80e65ac043af3a1878479 636 Pfam PF08310 LGFP repeat 44 92 1.3E-11 T 12-10-2018 IPR013207 LGFP JDM601_2464 5a250a338db80e65ac043af3a1878479 636 Pfam PF08310 LGFP repeat 97 152 3.0E-10 T 12-10-2018 IPR013207 LGFP JDM601_2784 90baad8f07580d73d1062aaaa3ed1ef3 201 Gene3D G3DSA:3.40.190.10 4 150 1.6E-24 T 12-10-2018 JDM601_2784 90baad8f07580d73d1062aaaa3ed1ef3 201 SUPERFAMILY SSF53850 4 156 1.09E-20 T 12-10-2018 JDM601_2784 90baad8f07580d73d1062aaaa3ed1ef3 201 Gene3D G3DSA:3.40.190.10 37 131 1.6E-24 T 12-10-2018 JDM601_2784 90baad8f07580d73d1062aaaa3ed1ef3 201 Pfam PF03466 LysR substrate binding domain 4 153 2.2E-22 T 12-10-2018 IPR005119 LysR, substrate-binding JDM601_4144 5fd18495bb915a9c4581fec62bd21f35 369 Pfam PF13845 Septum formation 94 319 1.1E-76 T 12-10-2018 IPR026004 Septum formation-related domain JDM601_3974 bd7a39d143524df2371e3317b1b636fb 273 Pfam PF06271 RDD family 22 148 1.2E-13 T 12-10-2018 IPR010432 RDD JDM601_4105 065a6d5891c64fb20f68befb6b67d56b 1052 Gene3D G3DSA:2.60.120.610 26 195 2.3E-57 T 12-10-2018 IPR027451 Arabinofuranosyltransferase, domain 1 JDM601_4105 065a6d5891c64fb20f68befb6b67d56b 1052 Gene3D G3DSA:2.60.120.940 714 924 7.9E-57 T 12-10-2018 JDM601_4105 065a6d5891c64fb20f68befb6b67d56b 1052 Pfam PF04602 Mycobacterial cell wall arabinan synthesis protein 4 644 2.3E-286 T 12-10-2018 IPR007680 Arabinofuranosyltransferase, N-terminal GO:0052636|GO:0071766 JDM601_4105 065a6d5891c64fb20f68befb6b67d56b 1052 Pfam PF14896 EmbC C-terminal domain 675 1049 6.9E-141 T 12-10-2018 IPR032731 Arabinosyltransferase, C-terminal JDM601_1348 e84d971db2458d403e24dc536587cbd0 349 Gene3D G3DSA:1.10.150.130 44 154 1.5E-21 T 12-10-2018 IPR010998 Integrase/recombinase, N-terminal JDM601_1348 e84d971db2458d403e24dc536587cbd0 349 Pfam PF00589 Phage integrase family 156 327 5.1E-19 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 JDM601_1348 e84d971db2458d403e24dc536587cbd0 349 SUPERFAMILY SSF56349 46 331 1.27E-51 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 JDM601_1348 e84d971db2458d403e24dc536587cbd0 349 Gene3D G3DSA:1.10.443.10 155 341 3.9E-36 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 JDM601_1617 06ecb27bcad9f3c74c8b476fe37c3541 242 SUPERFAMILY SSF81982 30 154 1.09E-42 T 12-10-2018 JDM601_1617 06ecb27bcad9f3c74c8b476fe37c3541 242 ProDom PD886639 ANTIGEN IMMUNOGENIC EXTRACELLULAR MPT63 MPB63 PRECURSOR IMMUNOPROTECTIVE SIGNAL SEQUENCING DIRECT 31 153 2.0E-18 T 12-10-2018 IPR015250 MPT63-like GO:0005615 JDM601_1617 06ecb27bcad9f3c74c8b476fe37c3541 242 Gene3D G3DSA:2.60.40.1240 28 155 3.5E-46 T 12-10-2018 IPR029050 Immunoprotective extracellular, immunoglobulin-like domain superfamily JDM601_1617 06ecb27bcad9f3c74c8b476fe37c3541 242 Pfam PF09167 Domain of unknown function (DUF1942) 31 153 5.3E-49 T 12-10-2018 IPR015250 MPT63-like GO:0005615 JDM601_0040 6a893735d10c667a199ab8e323cf67ee 277 Pfam PF00877 NlpC/P60 family 180 267 8.0E-19 T 12-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain JDM601_0040 6a893735d10c667a199ab8e323cf67ee 277 SUPERFAMILY SSF54001 163 267 3.24E-33 T 12-10-2018 IPR038765 Papain-like cysteine peptidase superfamily JDM601_0040 6a893735d10c667a199ab8e323cf67ee 277 Gene3D G3DSA:3.90.1720.10 49 274 1.5E-37 T 12-10-2018 JDM601_2223 2153f6d830553d08dca0d53346ebeba4 253 Pfam PF09335 SNARE associated Golgi protein 83 199 1.8E-23 T 12-10-2018 IPR032816 SNARE associated Golgi protein JDM601_0125 694fb0abc4abf27a7c2a2db9eb4c7d2c 521 TIGRFAM TIGR00996 Mtu_fam_mce: virulence factor Mce family protein 17 310 1.7E-77 T 12-10-2018 IPR005693 Virulence factor Mce protein JDM601_0125 694fb0abc4abf27a7c2a2db9eb4c7d2c 521 Pfam PF11887 Cholesterol uptake porter CUP1 of Mce4, putative 173 291 1.2E-7 T 12-10-2018 IPR024516 Mammalian cell entry, C-terminal JDM601_0125 694fb0abc4abf27a7c2a2db9eb4c7d2c 521 Pfam PF02470 MlaD protein 46 120 5.5E-11 T 12-10-2018 IPR003399 Mce/MlaD JDM601_2776 a0705d61e9fd8229109f7c32b0e1c0ac 514 SUPERFAMILY SSF55073 298 460 2.51E-37 T 12-10-2018 IPR029787 Nucleotide cyclase JDM601_2776 a0705d61e9fd8229109f7c32b0e1c0ac 514 SMART SM00044 264 447 0.0017 T 12-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 JDM601_2776 a0705d61e9fd8229109f7c32b0e1c0ac 514 Gene3D G3DSA:3.30.70.1230 291 463 1.3E-52 T 12-10-2018 IPR029787 Nucleotide cyclase JDM601_2776 a0705d61e9fd8229109f7c32b0e1c0ac 514 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 305 449 7.7E-11 T 12-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 JDM601_2776 a0705d61e9fd8229109f7c32b0e1c0ac 514 SUPERFAMILY SSF53474 3 289 1.34E-46 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_2776 a0705d61e9fd8229109f7c32b0e1c0ac 514 ProSitePatterns PS00380 Rhodanese signature 1. 253 264 - T 12-10-2018 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350|MetaCyc: PWY-7927|Reactome: R-HSA-1614558 JDM601_2776 a0705d61e9fd8229109f7c32b0e1c0ac 514 Pfam PF00561 alpha/beta hydrolase fold 57 278 1.7E-10 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 JDM601_2776 a0705d61e9fd8229109f7c32b0e1c0ac 514 Gene3D G3DSA:3.40.50.1820 11 290 1.2E-42 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_0568 4e8155a7cca9a8cf0b03075d423ec03d 70 Pfam PF09957 Bacterial antitoxin of type II TA system, VapB 3 43 9.8E-18 T 12-10-2018 IPR019239 Bacterial antitoxin of type II TA system, VapB JDM601_2872 2549789009dd88a9cd60f438c0faa9c1 537 Pfam PF00361 Proton-conducting membrane transporter 178 472 2.0E-71 T 12-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 JDM601_2872 2549789009dd88a9cd60f438c0faa9c1 537 Hamap MF_00445 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic [ndhB]. 9 526 17.325 T 12-10-2018 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 JDM601_2872 2549789009dd88a9cd60f438c0faa9c1 537 TIGRFAM TIGR01770 NDH_I_N: proton-translocating NADH-quinone oxidoreductase, chain N 155 525 4.4E-112 T 12-10-2018 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 JDM601_2055 929c2a56c7ac41af33124e27db2b950b 271 SUPERFAMILY SSF51735 1 211 1.67E-19 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_2055 929c2a56c7ac41af33124e27db2b950b 271 Gene3D G3DSA:3.40.50.720 2 182 2.6E-27 T 12-10-2018 JDM601_2055 929c2a56c7ac41af33124e27db2b950b 271 Gene3D G3DSA:3.90.25.10 122 234 2.6E-27 T 12-10-2018 JDM601_2055 929c2a56c7ac41af33124e27db2b950b 271 Pfam PF05368 NmrA-like family 2 205 1.1E-17 T 12-10-2018 IPR008030 NmrA-like domain Reactome: R-HSA-70635 JDM601_2892 2d3b9158c07aa46193b28f2f25f70e76 261 Pfam PF02405 Permease MlaE 45 248 4.8E-51 T 12-10-2018 IPR030802 ABC transporter permease MalE GO:0043190 JDM601_4124 1d7714812a7de576fc857cbf48edf0b4 307 Gene3D G3DSA:1.10.357.140 34 179 1.1E-8 T 12-10-2018 JDM601_4124 1d7714812a7de576fc857cbf48edf0b4 307 Pfam PF01040 UbiA prenyltransferase family 39 272 5.2E-19 T 12-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 JDM601_0526 a4b04cbeb515ebee90782f7ef2bc0c78 505 Pfam PF05140 ResB-like family 1 489 6.8E-130 T 12-10-2018 IPR007816 ResB-like domain JDM601_3674 a4c52ef2e18ac1e2f0fe644c8c48cd86 150 Pfam PF13577 SnoaL-like domain 2 134 4.3E-23 T 12-10-2018 IPR037401 SnoaL-like domain JDM601_3674 a4c52ef2e18ac1e2f0fe644c8c48cd86 150 SUPERFAMILY SSF54427 2 141 1.2E-27 T 12-10-2018 IPR032710 NTF2-like domain superfamily JDM601_3674 a4c52ef2e18ac1e2f0fe644c8c48cd86 150 Gene3D G3DSA:3.10.450.50 1 150 4.4E-28 T 12-10-2018 JDM601_0513 f93ff8300eb7815ff6abd05bffb4b9e9 224 Gene3D G3DSA:3.40.50.1820 4 224 5.7E-32 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_0513 f93ff8300eb7815ff6abd05bffb4b9e9 224 SUPERFAMILY SSF53474 4 223 1.04E-25 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_0513 f93ff8300eb7815ff6abd05bffb4b9e9 224 Pfam PF00756 Putative esterase 17 222 4.0E-8 T 12-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 JDM601_0286 f6d08717e1c9fe0f8dcc9adbf12be131 523 SUPERFAMILY SSF140459 1 161 1.02E-55 T 12-10-2018 JDM601_0286 f6d08717e1c9fe0f8dcc9adbf12be131 523 Gene3D G3DSA:1.20.1260.20 1 166 1.9E-56 T 12-10-2018 IPR038332 PPE superfamily JDM601_0286 f6d08717e1c9fe0f8dcc9adbf12be131 523 Pfam PF00823 PPE family 4 159 2.5E-56 T 12-10-2018 IPR000030 PPE family JDM601_0493 b70b3a97716056e5e2e89ffc76b07290 280 Pfam PF01261 Xylose isomerase-like TIM barrel 23 229 5.2E-13 T 12-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain JDM601_0493 b70b3a97716056e5e2e89ffc76b07290 280 SUPERFAMILY SSF51658 4 275 4.7E-39 T 12-10-2018 IPR036237 Xylose isomerase-like superfamily JDM601_0493 b70b3a97716056e5e2e89ffc76b07290 280 Gene3D G3DSA:3.20.20.150 2 278 3.5E-39 T 12-10-2018 JDM601_1229 744fbc72b67be5de8b1e384fa66477d2 1138 Gene3D G3DSA:2.40.70.10 839 1137 1.9E-90 T 12-10-2018 IPR021109 Aspartic peptidase domain superfamily JDM601_3567 9aadf97076eb3899ec30449d5ee1302c 129 Gene3D G3DSA:3.30.1050.40 2 129 1.0E-50 T 12-10-2018 JDM601_1311 1050b42514d3c41b8c0d75caf89c5110 147 Pfam PF10739 Protein of unknown function (DUF2550) 11 139 1.9E-40 T 12-10-2018 IPR019675 Protein of unknown function DUF2550 JDM601_4120 b1319db9eb6a897c6d75ec95d625189b 279 Gene3D G3DSA:3.40.960.10 175 276 2.6E-7 T 12-10-2018 JDM601_3225 2268abf61e216389e4e4da5f2af37b73 136 ProDom PD032647 MB3446 ML0386 RV3412/MT3521 CGL0602 27 122 2.0E-41 T 12-10-2018 IPR035165 Protein of unknown function DUF5319 JDM601_3225 2268abf61e216389e4e4da5f2af37b73 136 Pfam PF17252 Family of unknown function (DUF5319) 11 124 9.8E-51 T 12-10-2018 IPR035165 Protein of unknown function DUF5319 JDM601_2957 45265a732ed06683312f28c7050f1da2 241 Gene3D G3DSA:3.40.50.150 4 203 6.4E-40 T 12-10-2018 JDM601_2957 45265a732ed06683312f28c7050f1da2 241 SUPERFAMILY SSF53335 16 181 2.89E-29 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JDM601_2957 45265a732ed06683312f28c7050f1da2 241 Pfam PF13649 Methyltransferase domain 41 135 8.0E-15 T 12-10-2018 JDM601_1900 4b8d2d285c21107c1d5e2cc1f69fbb8e 374 Pfam PF11203 Putative type VII ESX secretion system translocon, EccE 170 242 1.3E-17 T 12-10-2018 IPR021368 Type VII secretion system protein EccE JDM601_1900 4b8d2d285c21107c1d5e2cc1f69fbb8e 374 TIGRFAM TIGR03923 T7SS_EccE: type VII secretion protein EccE 1 338 5.7E-71 T 12-10-2018 IPR021368 Type VII secretion system protein EccE JDM601_0691 fb985fb86d27b2d2a252e250fb62cc9a 134 Pfam PF11259 Protein of unknown function (DUF3060) 69 127 4.0E-22 T 12-10-2018 IPR021417 Protein of unknown function DUF3060 JDM601_0974 d031d6d26b33ac8137cbe0c9e7ee5efe 276 Pfam PF14011 EspG family 5 257 1.7E-37 T 12-10-2018 IPR025734 EspG family JDM601_1257 a64650bcf8daa060d311f16c5d6ef8ac 80 Pfam PF08681 Protein of unknown function (DUF1778) 5 70 5.9E-6 T 12-10-2018 IPR014795 Vibrio phage ICP1, Orf50 JDM601_1257 a64650bcf8daa060d311f16c5d6ef8ac 80 SUPERFAMILY SSF47598 4 65 9.34E-7 T 12-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 JDM601_1257 a64650bcf8daa060d311f16c5d6ef8ac 80 Gene3D G3DSA:1.20.5.780 1 72 1.8E-5 T 12-10-2018 JDM601_0302 4d4f84f7ca59cf327e5ee26435ea63b4 298 Gene3D G3DSA:3.20.20.140 20 293 1.2E-38 T 12-10-2018 JDM601_0302 4d4f84f7ca59cf327e5ee26435ea63b4 298 Pfam PF04909 Amidohydrolase 22 292 1.8E-27 T 12-10-2018 IPR006680 Amidohydrolase-related GO:0016787 JDM601_0302 4d4f84f7ca59cf327e5ee26435ea63b4 298 SUPERFAMILY SSF51556 21 292 8.62E-50 T 12-10-2018 IPR032466 Metal-dependent hydrolase JDM601_0344 57c02d1fc2b1e6130b212b5e857481f6 223 Pfam PF11139 Sap, sulfolipid-1-addressing protein 12 221 3.0E-56 T 12-10-2018 IPR021315 Glycolipid exporter Gap/Sap JDM601_3185 f0145f0dbe862bd3c786de6bce9bf646 536 Gene3D G3DSA:1.20.1260.20 1 142 1.2E-43 T 12-10-2018 IPR038332 PPE superfamily JDM601_3185 f0145f0dbe862bd3c786de6bce9bf646 536 Pfam PF00823 PPE family 1 128 1.2E-41 T 12-10-2018 IPR000030 PPE family JDM601_3185 f0145f0dbe862bd3c786de6bce9bf646 536 SUPERFAMILY SSF140459 1 141 1.2E-42 T 12-10-2018 JDM601_4153 5f3cf352af894da531170d7a3ff556be 309 TIGRFAM TIGR00350 lytR_cpsA_psr: cell envelope-related function transcriptional attenuator common domain 74 219 6.7E-39 T 12-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain JDM601_4153 5f3cf352af894da531170d7a3ff556be 309 Gene3D G3DSA:1.10.260.150 35 308 9.6E-67 T 12-10-2018 JDM601_4153 5f3cf352af894da531170d7a3ff556be 309 Pfam PF03816 Cell envelope-related transcriptional attenuator domain 75 220 1.6E-39 T 12-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain JDM601_3407 8f36d066b528109b7f3036ca6d129862 142 Gene3D G3DSA:3.40.50.1010 5 139 3.6E-12 T 12-10-2018 JDM601_3407 8f36d066b528109b7f3036ca6d129862 142 SUPERFAMILY SSF88723 5 128 1.18E-11 T 12-10-2018 IPR029060 PIN-like domain superfamily JDM601_3407 8f36d066b528109b7f3036ca6d129862 142 Pfam PF01850 PIN domain 7 117 9.5E-12 T 12-10-2018 IPR002716 PIN domain JDM601_3387 f55b65ab3ad2c5006f6a7481a878cb39 117 SUPERFAMILY SSF69118 14 105 1.73E-24 T 12-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 JDM601_3387 f55b65ab3ad2c5006f6a7481a878cb39 117 Gene3D G3DSA:1.20.1290.10 10 111 5.2E-27 T 12-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 JDM601_3387 f55b65ab3ad2c5006f6a7481a878cb39 117 Pfam PF02627 Carboxymuconolactone decarboxylase family 27 102 2.6E-17 T 12-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 JDM601_1728 c08d01c94e7950d0dfacd8bfa875e807 542 TIGRFAM TIGR03459 crt_membr: carotene biosynthesis associated membrane protein 31 529 3.9E-183 T 12-10-2018 IPR017822 Carotene biosynthesis-associated membrane protein, type-1 JDM601_2401 dc77fb0259fe3626f88a745dd9ace438 292 Gene3D G3DSA:3.20.20.70 1 291 5.0E-62 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JDM601_2401 dc77fb0259fe3626f88a745dd9ace438 292 Pfam PF03060 Nitronate monooxygenase 64 282 7.7E-27 T 12-10-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 JDM601_2401 dc77fb0259fe3626f88a745dd9ace438 292 SUPERFAMILY SSF51412 2 289 1.53E-39 T 12-10-2018 JDM601_2060 666e272682ec872261f70baffe62e9bd 413 Pfam PF00872 Transposase, Mutator family 6 378 1.3E-158 T 12-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 JDM601_3502 1fa92be07e2badd30a93ea565257bd96 181 Gene3D G3DSA:1.20.1290.10 33 179 4.3E-32 T 12-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 JDM601_3502 1fa92be07e2badd30a93ea565257bd96 181 SUPERFAMILY SSF69118 2 177 7.59E-31 T 12-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 JDM601_3502 1fa92be07e2badd30a93ea565257bd96 181 Pfam PF02627 Carboxymuconolactone decarboxylase family 45 123 2.2E-14 T 12-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 JDM601_0811 65c7b8bc0fc1cc9ec6b72a3369f51514 325 Pfam PF11583 P-aminobenzoate N-oxygenase AurF 6 290 5.3E-109 T 12-10-2018 IPR025859 P-aminobenzoate N-oxygenase AurF JDM601_0811 65c7b8bc0fc1cc9ec6b72a3369f51514 325 SUPERFAMILY SSF47240 20 231 1.31E-6 T 12-10-2018 IPR009078 Ferritin-like superfamily JDM601_3486 7faf336d9635a397eb4aa75b3697af87 362 SUPERFAMILY SSF51556 10 354 6.11E-51 T 12-10-2018 IPR032466 Metal-dependent hydrolase JDM601_3486 7faf336d9635a397eb4aa75b3697af87 362 Pfam PF04909 Amidohydrolase 14 353 2.5E-20 T 12-10-2018 IPR006680 Amidohydrolase-related GO:0016787 JDM601_3486 7faf336d9635a397eb4aa75b3697af87 362 Gene3D G3DSA:3.20.20.140 8 352 4.7E-49 T 12-10-2018 JDM601_2541 a2a1559578ec275ba02d681fd4404999 123 SUPERFAMILY SSF55961 2 120 9.42E-12 T 12-10-2018 JDM601_2541 a2a1559578ec275ba02d681fd4404999 123 Gene3D G3DSA:3.30.530.20 1 122 1.3E-9 T 12-10-2018 IPR023393 START-like domain superfamily JDM601_2541 a2a1559578ec275ba02d681fd4404999 123 Pfam PF10604 Polyketide cyclase / dehydrase and lipid transport 8 121 4.6E-12 T 12-10-2018 IPR019587 Polyketide cyclase/dehydrase JDM601_3005 9eee7a534e5430a8132ae613d2c349ce 379 SUPERFAMILY SSF53697 73 379 1.25E-46 T 12-10-2018 JDM601_4302 53d621988dfa835abeb52082bdbd46b1 85 Pfam PF11730 Protein of unknown function (DUF3297) 11 81 1.7E-35 T 12-10-2018 IPR021724 Protein of unknown function DUF3297 JDM601_1249 5b1310eaf44a62083417988d49f705e4 68 Gene3D G3DSA:3.40.630.30 1 57 1.9E-9 T 12-10-2018 JDM601_3900 7c0076ad3918c33d6c85ec31d847bfcd 324 PRINTS PR00412 Epoxide hydrolase signature 113 126 2.8E-33 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 JDM601_3900 7c0076ad3918c33d6c85ec31d847bfcd 324 PRINTS PR00412 Epoxide hydrolase signature 99 112 2.8E-33 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 JDM601_3900 7c0076ad3918c33d6c85ec31d847bfcd 324 PRINTS PR00412 Epoxide hydrolase signature 258 274 2.8E-33 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 JDM601_3900 7c0076ad3918c33d6c85ec31d847bfcd 324 PRINTS PR00412 Epoxide hydrolase signature 292 314 2.8E-33 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 JDM601_3900 7c0076ad3918c33d6c85ec31d847bfcd 324 PRINTS PR00412 Epoxide hydrolase signature 33 51 2.8E-33 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 JDM601_3900 7c0076ad3918c33d6c85ec31d847bfcd 324 PRINTS PR00412 Epoxide hydrolase signature 53 68 2.8E-33 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 JDM601_3900 7c0076ad3918c33d6c85ec31d847bfcd 324 Gene3D G3DSA:3.40.50.1820 1 318 1.1E-108 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_3900 7c0076ad3918c33d6c85ec31d847bfcd 324 SUPERFAMILY SSF53474 5 317 5.75E-77 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold JDM601_3900 7c0076ad3918c33d6c85ec31d847bfcd 324 Pfam PF00561 alpha/beta hydrolase fold 27 303 1.4E-24 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 JDM601_2403 8f32568c23ded065910b41b6cc18bc15 112 SUPERFAMILY SSF51182 20 106 4.33E-13 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily JDM601_2403 8f32568c23ded065910b41b6cc18bc15 112 Gene3D G3DSA:2.60.120.10 5 110 1.2E-20 T 12-10-2018 IPR014710 RmlC-like jelly roll fold JDM601_0806 c33d89f7f567f81514073a6b2d07f1ef 74 Pfam PF10745 Protein of unknown function (DUF2530) 1 71 9.2E-25 T 12-10-2018 IPR019681 Protein of unknown function DUF2530 JDM601_1587 8ae1eaae4e4d520c42ced7dc4e3c8d3f 258 Pfam PF02361 Cobalt transport protein 10 219 8.2E-33 T 12-10-2018 IPR003339 ABC/ECF transporter, transmembrane component JDM601_0887 00dba6e786452e34f13a3ebbb746dd4a 240 Gene3D G3DSA:3.50.50.60 19 137 4.1E-7 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_0887 00dba6e786452e34f13a3ebbb746dd4a 240 Pfam PF16170 Domain of unknown function (DUF4873) 139 226 8.7E-25 T 12-10-2018 IPR032371 Domain of unknown function DUF4873 JDM601_0316 0d1956744b70590e12a47767c82416dc 284 Pfam PF09995 Uncharacterized protein conserved in bacteria (DUF2236) 22 240 4.2E-57 T 12-10-2018 IPR018713 Domain of unknown function DUF2236 JDM601_1300 237afea9dd689b4170c31374f332fad1 219 Gene3D G3DSA:3.90.870.10 1 211 4.2E-61 T 12-10-2018 JDM601_1300 237afea9dd689b4170c31374f332fad1 219 Pfam PF01300 Telomere recombination 23 197 4.1E-40 T 12-10-2018 IPR006070 YrdC-like domain GO:0003725 JDM601_1300 237afea9dd689b4170c31374f332fad1 219 SUPERFAMILY SSF55821 4 209 3.97E-52 T 12-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily JDM601_1300 237afea9dd689b4170c31374f332fad1 219 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 10 208 1.9E-59 T 12-10-2018 IPR006070 YrdC-like domain GO:0003725 JDM601_0050 0d9c0bdcac0e601b20e1b32d1b9c40dc 507 Pfam PF08817 WXG100 protein secretion system (Wss), protein YukD 4 70 3.3E-11 T 12-10-2018 IPR024962 YukD-like JDM601_0050 0d9c0bdcac0e601b20e1b32d1b9c40dc 507 Gene3D G3DSA:3.10.20.90 2 72 5.4E-6 T 12-10-2018 JDM601_0050 0d9c0bdcac0e601b20e1b32d1b9c40dc 507 TIGRFAM TIGR03920 T7SS_EccD: type VII secretion integral membrane protein EccD 1 507 3.4E-90 T 12-10-2018 IPR006707 Type VII secretion system membrane protein EccD JDM601_0320 2f9314122e5f0b01d6574c2400e023d0 273 Pfam PF00722 Glycosyl hydrolases family 16 93 271 1.3E-16 T 12-10-2018 IPR000757 Glycoside hydrolase family 16 GO:0004553|GO:0005975 JDM601_0320 2f9314122e5f0b01d6574c2400e023d0 273 Gene3D G3DSA:2.60.120.200 45 273 9.0E-69 T 12-10-2018 JDM601_0320 2f9314122e5f0b01d6574c2400e023d0 273 SUPERFAMILY SSF49899 31 273 5.6E-44 T 12-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily JDM601_2693 f00c8794613383b6539d7be83e8ce359 166 TIGRFAM TIGR03618 Rv1155_F420: PPOX class probable F420-dependent enzyme 17 143 2.1E-33 T 12-10-2018 IPR019920 F420-binding domain, putative JDM601_2693 f00c8794613383b6539d7be83e8ce359 166 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 13 99 5.2E-21 T 12-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 JDM601_2693 f00c8794613383b6539d7be83e8ce359 166 SUPERFAMILY SSF50475 9 148 2.24E-39 T 12-10-2018 JDM601_2693 f00c8794613383b6539d7be83e8ce359 166 Gene3D G3DSA:2.30.110.10 10 156 1.3E-43 T 12-10-2018 IPR012349 FMN-binding split barrel GO:0048037 JDM601_4070 f8da1f98b07cf4c702a71379e10c6085 121 Pfam PF08843 Nucleotidyl transferase AbiEii toxin, Type IV TA system 20 120 2.1E-10 T 12-10-2018 IPR014942 Nucleotidyl transferase AbiEii toxin, Type IV TA system JDM601_0281 d81d2bcc4ca84bb7a52cb3fd1c02c151 432 PRINTS PR01228 Eggshell protein signature 283 298 1.5E-5 T 12-10-2018 JDM601_0281 d81d2bcc4ca84bb7a52cb3fd1c02c151 432 PRINTS PR01228 Eggshell protein signature 310 320 1.5E-5 T 12-10-2018 JDM601_0281 d81d2bcc4ca84bb7a52cb3fd1c02c151 432 PRINTS PR01228 Eggshell protein signature 201 212 1.5E-5 T 12-10-2018 JDM601_0281 d81d2bcc4ca84bb7a52cb3fd1c02c151 432 PRINTS PR01228 Eggshell protein signature 347 365 1.5E-5 T 12-10-2018 JDM601_2761 d22746e3d7296b8a85d606cc774117f6 328 SUPERFAMILY SSF53335 12 99 2.91E-8 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JDM601_2761 d22746e3d7296b8a85d606cc774117f6 328 Gene3D G3DSA:3.40.50.150 1 181 1.1E-25 T 12-10-2018 JDM601_2580 be353903ca7758de3de4305a1b41c97d 239 Gene3D G3DSA:3.40.50.880 1 238 1.4E-68 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like JDM601_2580 be353903ca7758de3de4305a1b41c97d 239 SUPERFAMILY SSF52317 27 233 1.46E-39 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like JDM601_2580 be353903ca7758de3de4305a1b41c97d 239 Pfam PF07722 Peptidase C26 1 213 1.2E-63 T 12-10-2018 IPR011697 Peptidase C26 GO:0016787 Reactome: R-HSA-6798695 JDM601_2260 52361adb4337282fd105ebe93f841ddf 316 Pfam PF02628 Cytochrome oxidase assembly protein 26 299 2.0E-14 T 12-10-2018 IPR003780 COX15/CtaA family GO:0006784|GO:0016021|GO:0016627|GO:0055114 Reactome: R-HSA-189451 JDM601_2802 ef822b196fe1c4d9241301ba1f75df32 245 SUPERFAMILY SSF141523 141 243 3.14E-24 T 12-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like JDM601_2802 ef822b196fe1c4d9241301ba1f75df32 245 Gene3D G3DSA:2.60.40.3710 8 102 1.2E-31 T 12-10-2018 JDM601_2802 ef822b196fe1c4d9241301ba1f75df32 245 Pfam PF03734 L,D-transpeptidase catalytic domain 141 243 3.5E-14 T 12-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 JDM601_2802 ef822b196fe1c4d9241301ba1f75df32 245 Gene3D G3DSA:2.40.440.10 103 245 2.0E-39 T 12-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like JDM601_1611 a0ecbd1d1edad1cd0b0305ff3e3284e7 104 Gene3D G3DSA:1.20.1290.10 5 99 2.7E-7 T 12-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 JDM601_1611 a0ecbd1d1edad1cd0b0305ff3e3284e7 104 SUPERFAMILY SSF69118 34 83 3.53E-7 T 12-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 JDM601_0142 da938464f031139f6440be825e3ee9c9 289 Pfam PF02405 Permease MlaE 68 277 3.0E-55 T 12-10-2018 IPR030802 ABC transporter permease MalE GO:0043190 JDM601_1894 adf6b76313f226aecfd983be2a1bb54f 99 SUPERFAMILY SSF140459 8 84 1.44E-25 T 12-10-2018 JDM601_1894 adf6b76313f226aecfd983be2a1bb54f 99 Gene3D G3DSA:1.10.287.850 1 98 2.1E-34 T 12-10-2018 JDM601_1894 adf6b76313f226aecfd983be2a1bb54f 99 Pfam PF00934 PE family 1 93 9.4E-35 T 12-10-2018 IPR000084 PE-PGRS family, N-terminal JDM601_3272 1817ecf84e1f67c866ab6cbe2680d7d5 394 TIGRFAM TIGR03931 T7SS_Rv3446c: type VII secretion-associated protein, Rv3446c family 238 387 1.2E-39 T 12-10-2018 IPR023840 Type VII secretion system Rv3446c JDM601_3631 f53e875799461f3fe4f6e0a04a38c7a3 280 Pfam PF02405 Permease MlaE 63 267 6.9E-49 T 12-10-2018 IPR030802 ABC transporter permease MalE GO:0043190 JDM601_3198 73a65e274e0cb192018848e16b9a7e70 130 Pfam PF05331 Protein of unknown function (DUF742) 17 129 9.8E-34 T 12-10-2018 IPR007995 Protein of unknown function DUF742 JDM601_0997 4ac8c21ff78e831609e08429c7294019 366 Pfam PF00823 PPE family 6 163 7.2E-62 T 12-10-2018 IPR000030 PPE family JDM601_0997 4ac8c21ff78e831609e08429c7294019 366 SUPERFAMILY SSF140459 4 175 1.28E-63 T 12-10-2018 JDM601_0997 4ac8c21ff78e831609e08429c7294019 366 Pfam PF12484 Polymorphic PE/PPE proteins C terminal 283 362 4.1E-17 T 12-10-2018 IPR022171 PPE family, C-terminal JDM601_0997 4ac8c21ff78e831609e08429c7294019 366 Gene3D G3DSA:1.20.1260.20 2 175 5.1E-69 T 12-10-2018 IPR038332 PPE superfamily JDM601_1124 43076af4ca6fe0a35c6a3292823331ee 332 Gene3D G3DSA:3.20.20.70 1 325 3.2E-120 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 JDM601_1124 43076af4ca6fe0a35c6a3292823331ee 332 Pfam PF03060 Nitronate monooxygenase 6 310 1.3E-50 T 12-10-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 JDM601_1124 43076af4ca6fe0a35c6a3292823331ee 332 SUPERFAMILY SSF51412 2 315 1.16E-65 T 12-10-2018 JDM601_0120 d7b93710d1b2398880e61b08e22acd0e 267 Pfam PF02405 Permease MlaE 49 258 8.3E-57 T 12-10-2018 IPR030802 ABC transporter permease MalE GO:0043190 JDM601_2795 13e322317fc7977547bd64a341996099 156 Gene3D G3DSA:3.30.160.270 4 152 2.1E-11 T 12-10-2018 JDM601_2795 13e322317fc7977547bd64a341996099 156 SUPERFAMILY SSF110921 60 152 5.89E-13 T 12-10-2018 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 JDM601_3233 69a20346d51716e2940b916c438a3a2a 315 Pfam PF08237 PE-PPE domain 100 250 1.9E-10 T 12-10-2018 IPR013228 PE-PPE, C-terminal JDM601_0915 c480b87eb3086e70bd12c77f8cfa632f 154 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 8 106 6.4E-24 T 12-10-2018 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like JDM601_2440 74a9d77149d57dd432c2e8147235e225 156 Pfam PF11292 Protein of unknown function (DUF3093) 10 154 3.5E-52 T 12-10-2018 IPR021443 Protein of unknown function DUF3093 JDM601_1190 164d5df8b1032447e458f4afbb337541 224 Gene3D G3DSA:1.20.120.1630 30 223 3.0E-31 T 12-10-2018 JDM601_1190 164d5df8b1032447e458f4afbb337541 224 Pfam PF04191 Phospholipid methyltransferase 111 202 6.1E-14 T 12-10-2018 IPR007318 Phospholipid methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825|Reactome: R-HSA-1483191 JDM601_0901 1272fd2ab2473a1a49e9aca98d910cd3 299 ProDom PD026943 MEMBRANE ANTIGEN TRANSMEMBRANE ANTIGENIC HOMOLOG PRECURSOR MLCB373.06 SIGNAL 1 170 4.0E-21 T 12-10-2018 IPR035166 Protein of unknown function DUF5336 JDM601_0901 1272fd2ab2473a1a49e9aca98d910cd3 299 Pfam PF17270 Family of unknown function (DUF5336) 8 167 1.0E-52 T 12-10-2018 IPR035166 Protein of unknown function DUF5336 JDM601_1873 fdefba00e286cb3c9bd52bc58bddf2bb 331 Pfam PF09995 Uncharacterized protein conserved in bacteria (DUF2236) 38 270 3.0E-52 T 12-10-2018 IPR018713 Domain of unknown function DUF2236 JDM601_3236 ed1ecc4dd91172630faeeff575938bbc 105 Pfam PF13787 Protein of unknown function with HXXEE motif 6 65 4.1E-8 T 12-10-2018 IPR025671 Protein of unknown function with HXXEE motif JDM601_2451 65766aae4e3097935375d2f4c9511af1 153 Pfam PF11298 Protein of unknown function (DUF3099) 18 89 3.4E-30 T 12-10-2018 IPR021449 Protein of unknown function DUF3099 JDM601_3706 e0f0cabf5e6e23262f0ba05364c27cce 250 Gene3D G3DSA:3.40.1080.10 4 244 3.5E-35 T 12-10-2018 JDM601_3706 e0f0cabf5e6e23262f0ba05364c27cce 250 SUPERFAMILY SSF100950 4 246 2.2E-49 T 12-10-2018 IPR037171 NagB/RpiA transferase-like JDM601_0957 dc37a2b415d66f60d1cc37547742a57c 501 Pfam PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase 80 232 2.8E-11 T 12-10-2018 IPR003342 Glycosyl transferase family 39/83 GO:0000030|GO:0006493|GO:0016020 Reactome: R-HSA-5173105 JDM601_0957 dc37a2b415d66f60d1cc37547742a57c 501 Pfam PF16192 C-terminal four TMM region of protein-O-mannosyltransferase 307 500 6.1E-19 T 12-10-2018 IPR032421 Protein O-mannosyl-transferase, C-terminal four TM domain KEGG: 00514+2.4.1.109|KEGG: 00515+2.4.1.109|MetaCyc: PWY-7921|MetaCyc: PWY-7922|MetaCyc: PWY-7979|Reactome: R-HSA-5173105 JDM601_2712 e942f960939db36adec32f727c8a08f3 224 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 3 180 4.0E-28 T 12-10-2018 IPR001303 Class II aldolase/adducin N-terminal JDM601_2712 e942f960939db36adec32f727c8a08f3 224 SUPERFAMILY SSF53639 3 201 1.31E-35 T 12-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily JDM601_2712 e942f960939db36adec32f727c8a08f3 224 Gene3D G3DSA:3.40.225.10 1 223 4.2E-37 T 12-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily JDM601_2712 e942f960939db36adec32f727c8a08f3 224 SMART SM01007 1 181 1.5E-17 T 12-10-2018 IPR001303 Class II aldolase/adducin N-terminal JDM601_1376 c77d65d1aa1c57c2c14fb7a171397b2b 772 PRINTS PR01228 Eggshell protein signature 196 207 4.3E-6 T 12-10-2018 JDM601_1376 c77d65d1aa1c57c2c14fb7a171397b2b 772 PRINTS PR01228 Eggshell protein signature 329 347 4.3E-6 T 12-10-2018 JDM601_1376 c77d65d1aa1c57c2c14fb7a171397b2b 772 PRINTS PR01228 Eggshell protein signature 258 273 4.3E-6 T 12-10-2018 JDM601_1376 c77d65d1aa1c57c2c14fb7a171397b2b 772 PRINTS PR01228 Eggshell protein signature 287 297 4.3E-6 T 12-10-2018 JDM601_0449 69b7d7e31c14d8945eb8f71ff9c7337b 79 SUPERFAMILY SSF47598 4 43 7.78E-6 T 12-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 JDM601_1705 b1067d22dd01d68e2e2efe548c4e9e70 215 ProDom PD111926 TRANSMEMBRANE MEMBRANE RV2197C/MT2253 PROBABLE ML0878 3 209 3.0E-29 T 12-10-2018 IPR024381 Protein of unknown function DUF2561 JDM601_1705 b1067d22dd01d68e2e2efe548c4e9e70 215 Pfam PF10812 Protein of unknown function (DUF2561) 3 204 4.2E-85 T 12-10-2018 IPR024381 Protein of unknown function DUF2561 JDM601_1525 a62c5ca8fa19c8aaf5c8446ed44f18e1 164 Pfam PF01814 Hemerythrin HHE cation binding domain 4 116 6.1E-11 T 12-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 JDM601_1525 a62c5ca8fa19c8aaf5c8446ed44f18e1 164 Gene3D G3DSA:1.20.120.520 1 140 8.7E-10 T 12-10-2018 JDM601_2518 698c8e8fa2118b087ab63f26a6e45894 415 Pfam PF02646 RmuC family 104 393 1.5E-76 T 12-10-2018 IPR003798 DNA recombination RmuC JDM601_3940 ac1d8a014635db36cd6883b4ebc687a1 227 Pfam PF00482 Type II secretion system (T2SS), protein F 56 179 3.3E-7 T 12-10-2018 IPR018076 Type II secretion system F domain JDM601_1707 64ce0bb72b4a4cd7a6575c8b5d761fe3 542 Pfam PF13631 Cytochrome b(N-terminal)/b6/petB 115 289 5.0E-59 T 12-10-2018 IPR005797 Cytochrome b/b6, N-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 JDM601_1707 64ce0bb72b4a4cd7a6575c8b5d761fe3 542 Gene3D G3DSA:1.20.810.10 10 442 3.8E-79 T 12-10-2018 IPR027387 Cytochrome b/b6-like domain superfamily Reactome: R-HSA-611105 JDM601_1707 64ce0bb72b4a4cd7a6575c8b5d761fe3 542 SUPERFAMILY SSF81342 16 293 7.69E-57 T 12-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 JDM601_3942 62c887c1fac3c7649c07483491eaaaa0 358 SUPERFAMILY SSF52540 125 328 1.53E-17 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_3942 62c887c1fac3c7649c07483491eaaaa0 358 TIGRFAM TIGR03815 CpaE_hom_Actino: helicase/secretion neighborhood CpaE-like protein 11 350 2.8E-102 T 12-10-2018 IPR022521 Conserved hypothetical protein CHP03815, CpaE-like JDM601_3942 62c887c1fac3c7649c07483491eaaaa0 358 Gene3D G3DSA:3.40.50.300 123 350 2.1E-24 T 12-10-2018 JDM601_3894 61543be7b955b8678fcb66bf02ba7836 149 Pfam PF11377 Protein of unknown function (DUF3180) 1 134 5.0E-37 T 12-10-2018 IPR021517 Protein of unknown function DUF3180 JDM601_0571 17a8ddba1d61936f4574012bb0fca8c6 790 Pfam PF03706 Lysylphosphatidylglycerol synthase TM region 488 777 1.9E-34 T 12-10-2018 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD JDM601_0171 53df9e88f222a2ec804e7e945f706b68 256 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 76 251 2.7E-39 T 12-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 JDM601_0171 53df9e88f222a2ec804e7e945f706b68 256 Gene3D G3DSA:3.40.50.150 39 255 8.4E-63 T 12-10-2018 JDM601_0171 53df9e88f222a2ec804e7e945f706b68 256 SUPERFAMILY SSF53335 79 253 3.35E-31 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JDM601_0171 53df9e88f222a2ec804e7e945f706b68 256 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 32 255 27.89 T 12-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 JDM601_0171 53df9e88f222a2ec804e7e945f706b68 256 Pfam PF02390 Putative methyltransferase 81 249 4.9E-54 T 12-10-2018 JDM601_1084 1b8e554be500307bc585d9a3645271e7 577 Pfam PF12077 Transmembrane protein of unknown function (DUF3556) 1 571 1.3E-286 T 12-10-2018 IPR021941 Protein of unknown function DUF3556, transmembrane JDM601_1125 590d6cd45005c12ecbbb0395ac496697 68 SUPERFAMILY SSF47598 4 55 2.0E-6 T 12-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 JDM601_0583 2f6f6eeef4b6372c52c69898050d5b4f 80 SUPERFAMILY SSF47598 4 40 1.87E-6 T 12-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 JDM601_1027 50f04b666f3c2c121d0fbb01b595e2d4 140 Pfam PF14155 Domain of unknown function (DUF4307) 19 129 5.4E-36 T 12-10-2018 IPR025443 Protein of unknown function DUF4307 JDM601_0042 3a1c81a8e448f14195932c4e01b033d2 104 ProDom PD069881 MB0028 RV0027/MT0030 1 104 2.0E-21 T 12-10-2018 JDM601_0042 3a1c81a8e448f14195932c4e01b033d2 104 Pfam PF10824 Excreted virulence factor EspC, type VII ESX diderm 1 97 1.4E-15 T 12-10-2018 IPR022536 ESX-1 secretion-associated protein EspC GO:0009306 JDM601_1289 3c014777e923b4494e3c2f7e13069335 253 Pfam PF05241 Emopamil binding protein 82 241 1.1E-8 T 12-10-2018 IPR007905 Emopamil-binding protein GO:0016021|GO:0016125|GO:0047750 JDM601_4329 b97a7ea2419256ee0a237ff16a3ca6a3 285 Pfam PF08237 PE-PPE domain 79 187 1.6E-10 T 12-10-2018 IPR013228 PE-PPE, C-terminal JDM601_0530 cd0b65343daa64330047c9fdc27ecb09 84 Pfam PF14012 Protein of unknown function (DUF4229) 2 70 3.9E-24 T 12-10-2018 IPR025323 Protein of unknown function DUF4229 JDM601_2413 e5ebc121f209d7350e90f3af6c332997 150 Pfam PF11611 Domain of unknown function (DUF4352) 54 142 2.0E-6 T 12-10-2018 IPR029051 Domain of unknown function DUF4352 JDM601_2413 e5ebc121f209d7350e90f3af6c332997 150 Gene3D G3DSA:2.60.40.1240 20 143 1.4E-8 T 12-10-2018 IPR029050 Immunoprotective extracellular, immunoglobulin-like domain superfamily JDM601_0990 f2ff7d2bf53f00e4a1bc228e06441427 163 Pfam PF04417 Protein of unknown function (DUF501) 25 144 9.4E-32 T 12-10-2018 IPR007511 Protein of unknown function DUF501 JDM601_1872 c3c34cd6487d41a4a2ffe1e65590a57b 193 SUPERFAMILY SSF50494 10 152 3.62E-7 T 12-10-2018 IPR009003 Peptidase S1, PA clan JDM601_4132 4c8f7ba81c0381818107514ced0d7f38 257 SMART SM00563 37 151 8.1E-34 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 JDM601_4132 4c8f7ba81c0381818107514ced0d7f38 257 Pfam PF01553 Acyltransferase 23 148 4.4E-27 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 JDM601_4132 4c8f7ba81c0381818107514ced0d7f38 257 SUPERFAMILY SSF69593 13 204 3.66E-30 T 12-10-2018 JDM601_1785 755d62172cbfcee5cce53b7eb228bc89 134 ProDom PD033474 ANTIGEN PRECURSOR SIGNAL LIPOPROTEIN LOW WEIGHT MOLECULAR LPPK MEMBRANE PALMITATE 27 117 1.0E-21 T 12-10-2018 IPR020235 Low molecular weight antigen MTB12 JDM601_0705 9f244463e077354c12b668b5feaa88f9 130 Pfam PF13924 Lipocalin-like domain 11 54 1.2E-11 T 12-10-2018 IPR024311 Lipocalin-like domain JDM601_0705 9f244463e077354c12b668b5feaa88f9 130 Pfam PF13924 Lipocalin-like domain 58 128 7.5E-11 T 12-10-2018 IPR024311 Lipocalin-like domain JDM601_3009 347882fd6f67a4c8fa5cb58f925d8bd3 128 Hamap MF_01479 Transcriptional regulator WhiB [whiB]. 10 128 19.095 T 12-10-2018 IPR003482 Transcription factor WhiB JDM601_3009 347882fd6f67a4c8fa5cb58f925d8bd3 128 Pfam PF02467 Transcription factor WhiB 60 123 1.8E-27 T 12-10-2018 IPR034768 WhiB-like iron-sulfur binding domain JDM601_1196 307add60282f38989cec03ae6d86c486 135 Gene3D G3DSA:1.10.10.1320 35 130 3.4E-7 T 12-10-2018 JDM601_2676 0c0de910bc7ac0be6107edb658ee7c9f 238 Pfam PF07510 Protein of unknown function (DUF1524) 91 217 4.8E-12 T 12-10-2018 IPR011089 Domain of unknown function DUF1524 JDM601_2965 5f3e3c2366f7930c398b440a48d83136 419 Pfam PF00487 Fatty acid desaturase 73 340 1.8E-33 T 12-10-2018 IPR005804 Fatty acid desaturase domain GO:0006629 JDM601_1043 4f7428136eef3bfa5e048be31ffab239 654 SUPERFAMILY SSF160935 94 216 2.48E-5 T 12-10-2018 JDM601_1043 4f7428136eef3bfa5e048be31ffab239 654 Pfam PF06742 Protein of unknown function (DUF1214) 190 217 0.017 T 12-10-2018 IPR010621 Domain of unknown function DUF1214 JDM601_2036 cf7a844f568fbbaddfeef8c4ac9813bc 218 Pfam PF04116 Fatty acid hydroxylase superfamily 53 197 1.6E-16 T 12-10-2018 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0008610|GO:0016491|GO:0055114 JDM601_0091 65fde8a20ad4dcae1a7200d42247dccd 197 SUPERFAMILY SSF46689 6 61 5.99E-9 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 JDM601_0091 65fde8a20ad4dcae1a7200d42247dccd 197 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 48 9.4E-8 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JDM601_0091 65fde8a20ad4dcae1a7200d42247dccd 197 Gene3D G3DSA:1.10.357.10 6 182 2.1E-14 T 12-10-2018 JDM601_1783 9c2ee902b2643b758f3c018523b20ec5 97 SUPERFAMILY SSF103007 1 93 7.98E-31 T 12-10-2018 IPR036746 TT1725-like superfamily JDM601_1783 9c2ee902b2643b758f3c018523b20ec5 97 Pfam PF04456 Protein of unknown function (DUF503) 3 89 1.6E-32 T 12-10-2018 IPR007546 Protein of unknown function DUF503 JDM601_1783 9c2ee902b2643b758f3c018523b20ec5 97 Gene3D G3DSA:3.30.70.1120 1 94 4.2E-23 T 12-10-2018 IPR036746 TT1725-like superfamily JDM601_2049 d5f9215c5c93008f3b79dbca27d2d57a 345 Pfam PF06742 Protein of unknown function (DUF1214) 73 148 2.0E-4 T 12-10-2018 IPR010621 Domain of unknown function DUF1214 JDM601_3206 7d9efdd1cf2fa5d855f3f9cf797e03c7 119 Pfam PF05423 Mycobacterium membrane protein 1 118 4.6E-45 T 12-10-2018 IPR008693 Transport accessory protein MmpS JDM601_3206 7d9efdd1cf2fa5d855f3f9cf797e03c7 119 Gene3D G3DSA:2.60.40.2880 29 119 1.3E-32 T 12-10-2018 IPR038468 Transport accessory protein MmpS, soluble domain superfamily JDM601_1189 a47aa37629be24a92da030f5e66b8bf9 416 Pfam PF10783 Protein of unknown function (DUF2599) 313 410 4.3E-37 T 12-10-2018 IPR019719 Protein of unknown function DUF2599 JDM601_1990 73e1dd055ff376dba119807b23c30366 84 Pfam PF05305 Protein of unknown function (DUF732) 2 79 7.0E-7 T 12-10-2018 IPR007969 Domain of unknown function DUF732 JDM601_4228 c2ea6820bfd801d76748c42ac634657a 164 SUPERFAMILY SSF55961 44 138 3.3E-5 T 12-10-2018 JDM601_2596 f6f369c44e72a6e45eadbcad3ead9d0a 83 ProDom PD069408 TRANSMEMBRANE MEMBRANE RV2876/MT2944.1 CGL2017/CG2211 ML1584 POSSIBLE P20 1 83 2.0E-28 T 12-10-2018 IPR024341 Protein of unknown function DUF2631 JDM601_2596 f6f369c44e72a6e45eadbcad3ead9d0a 83 Pfam PF10939 Protein of unknown function (DUF2631) 2 64 2.3E-28 T 12-10-2018 IPR024341 Protein of unknown function DUF2631 JDM601_0877 f60acc96fbde2bd7f3dd7a73e80b30a6 505 SMART SM00507 360 411 6.6E-9 T 12-10-2018 IPR003615 HNH nuclease JDM601_0877 f60acc96fbde2bd7f3dd7a73e80b30a6 505 Pfam PF02720 Domain of unknown function (DUF222) 28 369 1.1E-53 T 12-10-2018 IPR003870 Domain of unknown function DUF222 JDM601_1219 e70ee8f1e2d15525b86559186268098c 186 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 28 184 7.0E-54 T 12-10-2018 JDM601_1219 e70ee8f1e2d15525b86559186268098c 186 Pfam PF14041 LppP/LprE lipoprotein 97 157 5.9E-10 T 12-10-2018 IPR025971 LppP/LprE lipoprotein JDM601_1153 62e1205a5c01ba64c492676de062aba5 108 Pfam PF05305 Protein of unknown function (DUF732) 5 99 4.5E-26 T 12-10-2018 IPR007969 Domain of unknown function DUF732 JDM601_2113 25677bbd1f35c2ca49bb97034a00c0fd 239 Pfam PF14230 Domain of unknown function (DUF4333) 149 231 5.3E-26 T 12-10-2018 IPR025637 Domain of unknown function DUF4333 JDM601_0018 118ed8d678969e03ceabc6d040578195 477 Pfam PF01098 Cell cycle protein 89 453 6.5E-101 T 12-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 JDM601_3294 a190f7f43f701e5b60dfc1642db283f4 242 Pfam PF03734 L,D-transpeptidase catalytic domain 90 236 1.3E-5 T 12-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 JDM601_2425 a490c185a5dee743d14659515c8e56e7 178 Pfam PF11452 Protein of unknown function (DUF3000) 1 169 4.2E-69 T 12-10-2018 IPR021555 Protein of unknown function DUF3000 JDM601_0076 153619e2a8c4dddee4a28a8f3b6063aa 366 Pfam PF00487 Fatty acid desaturase 78 345 5.2E-35 T 12-10-2018 IPR005804 Fatty acid desaturase domain GO:0006629 JDM601_2104 dff34e057cbd53825ef2c5d606d406ea 163 Pfam PF04186 FxsA cytoplasmic membrane protein 8 108 1.0E-14 T 12-10-2018 IPR007313 FxsA cytoplasmic membrane protein GO:0016020 JDM601_1645 cf6a8e0e75abfbe148bcaa76dec6983e 188 Gene3D G3DSA:1.20.120.1630 8 188 5.6E-29 T 12-10-2018 JDM601_1645 cf6a8e0e75abfbe148bcaa76dec6983e 188 Pfam PF04191 Phospholipid methyltransferase 78 176 3.1E-16 T 12-10-2018 IPR007318 Phospholipid methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825|Reactome: R-HSA-1483191 JDM601_2428 b4a349c73194025b1efcc40826fbf853 143 Pfam PF05232 Chlorhexidine efflux transporter 70 132 2.2E-24 T 12-10-2018 IPR007896 Chlorhexidine efflux transporter JDM601_2428 b4a349c73194025b1efcc40826fbf853 143 Pfam PF05232 Chlorhexidine efflux transporter 4 64 1.2E-15 T 12-10-2018 IPR007896 Chlorhexidine efflux transporter JDM601_4083 1eba753bc56ef791d2ad8b9c5b50fd20 276 Pfam PF01061 ABC-2 type transporter 29 237 2.5E-24 T 12-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 JDM601_1380 6def97957f5a23670b21d23ffc4da123 117 Pfam PF05305 Protein of unknown function (DUF732) 6 109 5.4E-7 T 12-10-2018 IPR007969 Domain of unknown function DUF732 JDM601_1024 463f697914c86a1be594436dfb71b3bb 239 Pfam PF06271 RDD family 91 231 1.2E-23 T 12-10-2018 IPR010432 RDD JDM601_4303 c907ba7d161b03e05c4679d4953a523f 670 SUPERFAMILY SSF52467 126 332 4.36E-7 T 12-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily JDM601_2111 8002345b9646bc8e51978c929e81bcc3 137 Gene3D G3DSA:2.30.110.10 1 133 4.6E-42 T 12-10-2018 IPR012349 FMN-binding split barrel GO:0048037 JDM601_2111 8002345b9646bc8e51978c929e81bcc3 137 SUPERFAMILY SSF50475 10 127 3.42E-31 T 12-10-2018 JDM601_2111 8002345b9646bc8e51978c929e81bcc3 137 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 9 89 2.1E-10 T 12-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 JDM601_2111 8002345b9646bc8e51978c929e81bcc3 137 TIGRFAM TIGR03618 Rv1155_F420: PPOX class probable F420-dependent enzyme 13 127 3.6E-28 T 12-10-2018 IPR019920 F420-binding domain, putative JDM601_0807 4593cedc3c3df06dce296ce8b3a6e517 275 Gene3D G3DSA:3.40.1280.10 113 273 4.9E-44 T 12-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal JDM601_0807 4593cedc3c3df06dce296ce8b3a6e517 275 Pfam PF00588 SpoU rRNA Methylase family 125 268 9.3E-29 T 12-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 JDM601_0807 4593cedc3c3df06dce296ce8b3a6e517 275 SUPERFAMILY SSF75217 102 272 1.9E-36 T 12-10-2018 IPR029028 Alpha/beta knot methyltransferases JDM601_0807 4593cedc3c3df06dce296ce8b3a6e517 275 SUPERFAMILY SSF55315 10 109 4.24E-12 T 12-10-2018 IPR029064 50S ribosomal protein L30e-like JDM601_2858 dd46ae6612996fb44689711a4096d115 137 Gene3D G3DSA:3.40.50.2300 4 134 1.6E-10 T 12-10-2018 JDM601_2858 dd46ae6612996fb44689711a4096d115 137 SMART SM00448 11 127 1.2E-4 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 JDM601_2858 dd46ae6612996fb44689711a4096d115 137 SUPERFAMILY SSF52172 11 132 3.27E-11 T 12-10-2018 IPR011006 CheY-like superfamily JDM601_0783 8b1767cf3f3f03625d802beb0133fc73 141 SUPERFAMILY SSF55961 1 132 6.57E-22 T 12-10-2018 JDM601_0783 8b1767cf3f3f03625d802beb0133fc73 141 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 2 128 3.3E-12 T 12-10-2018 IPR005031 Coenzyme Q-binding protein COQ10, START domain Reactome: R-HSA-611105 JDM601_0783 8b1767cf3f3f03625d802beb0133fc73 141 Gene3D G3DSA:3.30.530.20 1 135 2.6E-24 T 12-10-2018 IPR023393 START-like domain superfamily JDM601_0275 222a2aac3228a112e03aa221d6287f24 325 Pfam PF03916 Polysulphide reductase, NrfD 20 196 3.9E-15 T 12-10-2018 IPR005614 NrfD family JDM601_0275 222a2aac3228a112e03aa221d6287f24 325 Gene3D G3DSA:1.20.1630.10 9 281 9.9E-19 T 12-10-2018 JDM601_1166 04b4fa6e0351844e9f2878da6dc96b8c 99 SUPERFAMILY SSF140459 8 83 9.94E-25 T 12-10-2018 JDM601_1166 04b4fa6e0351844e9f2878da6dc96b8c 99 Gene3D G3DSA:1.10.287.850 1 99 5.2E-33 T 12-10-2018 JDM601_1166 04b4fa6e0351844e9f2878da6dc96b8c 99 Pfam PF00934 PE family 1 92 6.6E-33 T 12-10-2018 IPR000084 PE-PGRS family, N-terminal JDM601_0446 1dcb7babfe7c06e4b6565bb5d1c19f43 92 Pfam PF16936 Putative holin 14 91 1.4E-32 T 12-10-2018 IPR031614 Putative holin JDM601_2920 bc4d91488d2c67bbd985479354220806 284 TIGRFAM TIGR02569 TIGR02569_actnb: TIGR02569 family protein 4 280 2.3E-125 T 12-10-2018 IPR013402 Conserved hypothetical protein CHP02569 JDM601_0889 fdb5d31509ce715c53dd58147d23029f 133 Pfam PF04020 Mycobacterial 4 TMS phage holin, superfamily IV 3 120 1.6E-30 T 12-10-2018 IPR007165 Mycobacterial 4 TMS phage holin, superfamily IV JDM601_0978 4906827d30a5a041c0dd1c7905f9265a 169 Pfam PF10738 Probable lipoprotein LpqN 1 167 7.4E-54 T 12-10-2018 IPR019674 Lipoprotein LpqT, predicted JDM601_0482 96bb5796a39e98732df40118ddc59f51 330 Pfam PF01370 NAD dependent epimerase/dehydratase family 4 230 5.5E-34 T 12-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 JDM601_0482 96bb5796a39e98732df40118ddc59f51 330 SUPERFAMILY SSF51735 1 328 1.41E-65 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_0482 96bb5796a39e98732df40118ddc59f51 330 Gene3D G3DSA:3.40.50.720 1 330 7.1E-106 T 12-10-2018 JDM601_1390 c1af8e2eda639c3801149cbcff7ab276 235 Pfam PF07510 Protein of unknown function (DUF1524) 91 229 1.1E-18 T 12-10-2018 IPR011089 Domain of unknown function DUF1524 JDM601_3797 c2e8ea8e171fa483d197928f20deb192 290 Pfam PF02405 Permease MlaE 70 280 8.9E-53 T 12-10-2018 IPR030802 ABC transporter permease MalE GO:0043190 JDM601_3095 080396c30fcacc4f6cb2e3c37a477607 178 Pfam PF07098 Protein of unknown function (DUF1360) 71 169 1.5E-33 T 12-10-2018 IPR010773 Mycobacterium phage PG1, Gp7 JDM601_0121 a49ffd9bd19a75b18b996e5e3b3684ad 284 Pfam PF02405 Permease MlaE 65 268 5.6E-52 T 12-10-2018 IPR030802 ABC transporter permease MalE GO:0043190 JDM601_1285 657a575a9529d1aed501fba1e4848015 479 Pfam PF13810 Domain of unknown function (DUF4185) 149 475 6.7E-119 T 12-10-2018 IPR025442 Domain of unknown function DUF4185 JDM601_3382 92110e00825bc2a8d6e565f374aedba7 103 Gene3D G3DSA:2.30.30.110 6 103 7.1E-21 T 12-10-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor JDM601_3382 92110e00825bc2a8d6e565f374aedba7 103 SUPERFAMILY SSF50118 2 102 7.63E-21 T 12-10-2018 JDM601_3382 92110e00825bc2a8d6e565f374aedba7 103 Pfam PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system 4 96 7.6E-16 T 12-10-2018 IPR003477 mRNA interferase PemK-like GO:0003677 JDM601_0519 d23311cd52cf63b296433e91026baa01 504 PRINTS PR01228 Eggshell protein signature 358 368 1.0E-6 T 12-10-2018 JDM601_0519 d23311cd52cf63b296433e91026baa01 504 PRINTS PR01228 Eggshell protein signature 248 259 1.0E-6 T 12-10-2018 JDM601_0519 d23311cd52cf63b296433e91026baa01 504 PRINTS PR01228 Eggshell protein signature 332 347 1.0E-6 T 12-10-2018 JDM601_0519 d23311cd52cf63b296433e91026baa01 504 PRINTS PR01228 Eggshell protein signature 398 416 1.0E-6 T 12-10-2018 JDM601_3350 94fad717d2d61c38e7a7d2fe14da5951 51 TIGRFAM TIGR03969 mycofactocin: mycofactocin precursor 30 51 8.8E-13 T 12-10-2018 IPR023988 Mycofactocin JDM601_2733 0d015f169ecb3de8a0adaf2185d957e0 67 TIGRFAM TIGR04354 amphi-Trp: amphi-Trp domain 2 63 8.6E-11 T 12-10-2018 IPR027598 Amphi-Trp domain JDM601_0404 84882fd0fd8954e15d6158dc0c211fe4 102 Pfam PF11662 Protein of unknown function (DUF3263) 21 92 1.4E-36 T 12-10-2018 IPR021678 Protein of unknown function DUF3263 JDM601_1265 62d38edbe0fd5f8a847ccb3367b5685f 385 Pfam PF09661 Protein of unknown function (DUF2398) 15 369 2.7E-78 T 12-10-2018 IPR013494 Conserved hypothetical protein CHP02678 JDM601_3001 d6c7bc2e1cfc9cbda4ef609f8c6e323e 551 PRINTS PR01228 Eggshell protein signature 159 170 9.3E-7 T 12-10-2018 JDM601_3001 d6c7bc2e1cfc9cbda4ef609f8c6e323e 551 PRINTS PR01228 Eggshell protein signature 262 272 9.3E-7 T 12-10-2018 JDM601_3001 d6c7bc2e1cfc9cbda4ef609f8c6e323e 551 PRINTS PR01228 Eggshell protein signature 296 314 9.3E-7 T 12-10-2018 JDM601_3001 d6c7bc2e1cfc9cbda4ef609f8c6e323e 551 PRINTS PR01228 Eggshell protein signature 236 251 9.3E-7 T 12-10-2018 JDM601_3060 2be7e6d6afa99343ce42051393faa5cf 248 Pfam PF13618 Gluconate 2-dehydrogenase subunit 3 77 206 1.1E-17 T 12-10-2018 IPR027056 Gluconate 2-dehydrogenase subunit 3 KEGG: 00030+1.1.99.3|MetaCyc: PWY-7165 JDM601_0197 8c00b364c35b165f9e08b32ca64b5ca1 140 Pfam PF04134 Protein of unknown function, DUF393 10 123 3.9E-25 T 12-10-2018 IPR007263 Protein of unknown function DUF393 JDM601_3729 89868a65d2d1e39f3b9751763917ab0f 124 Pfam PF16859 Bacterial transcriptional repressor C-terminal 1 93 1.6E-8 T 12-10-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal JDM601_3729 89868a65d2d1e39f3b9751763917ab0f 124 SUPERFAMILY SSF48498 1 95 1.84E-10 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily JDM601_3729 89868a65d2d1e39f3b9751763917ab0f 124 Gene3D G3DSA:1.10.357.10 1 121 1.3E-14 T 12-10-2018 JDM601_3838 6329a16ec77d103e2029fe2fc0f03347 393 SUPERFAMILY SSF51735 2 285 4.09E-46 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily JDM601_3838 6329a16ec77d103e2029fe2fc0f03347 393 Pfam PF01370 NAD dependent epimerase/dehydratase family 2 140 9.5E-19 T 12-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 JDM601_3838 6329a16ec77d103e2029fe2fc0f03347 393 Gene3D G3DSA:3.40.50.720 1 289 3.2E-47 T 12-10-2018 JDM601_2430 d366fbd55788459b8f0878beb8abdee7 429 PRINTS PR00758 Arsenical pump membrane protein signature 364 389 1.7E-11 T 12-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 JDM601_2430 d366fbd55788459b8f0878beb8abdee7 429 PRINTS PR00758 Arsenical pump membrane protein signature 102 126 1.7E-11 T 12-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 JDM601_2430 d366fbd55788459b8f0878beb8abdee7 429 PRINTS PR00758 Arsenical pump membrane protein signature 275 299 1.7E-11 T 12-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 JDM601_2430 d366fbd55788459b8f0878beb8abdee7 429 PRINTS PR00758 Arsenical pump membrane protein signature 397 421 1.7E-11 T 12-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 JDM601_2430 d366fbd55788459b8f0878beb8abdee7 429 PRINTS PR00758 Arsenical pump membrane protein signature 218 243 1.7E-11 T 12-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 JDM601_2430 d366fbd55788459b8f0878beb8abdee7 429 Pfam PF03600 Citrate transporter 15 368 5.1E-55 T 12-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 JDM601_0587 86743d82e72cd17fc1f163a13b71672e 258 Pfam PF13622 Thioesterase-like superfamily 23 257 3.8E-31 T 12-10-2018 JDM601_0587 86743d82e72cd17fc1f163a13b71672e 258 Gene3D G3DSA:3.10.129.90 15 254 9.6E-11 T 12-10-2018 JDM601_2411 ab4ec1bb8dafe1f949dcfd083f1c4f6b 206 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 68 2.2E-4 T 12-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain JDM601_2411 ab4ec1bb8dafe1f949dcfd083f1c4f6b 206 SUPERFAMILY SSF54909 1 91 1.66E-7 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel JDM601_1483 c80fee25905247f0e8aed47129d5c89b 479 Pfam PF05762 VWA domain containing CoxE-like protein 252 472 2.4E-57 T 12-10-2018 IPR008912 Uncharacterised protein family CoxE-like JDM601_1483 c80fee25905247f0e8aed47129d5c89b 479 PIRSF PIRSF010256 5 479 5.3E-134 T 12-10-2018 IPR011195 Uncharacterised conserved protein UCP010256 JDM601_1483 c80fee25905247f0e8aed47129d5c89b 479 SUPERFAMILY SSF53300 308 417 3.74E-5 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily JDM601_2726 e49914de8807ee9c3b423c91960422c7 236 Pfam PF07681 DoxX 71 151 2.0E-14 T 12-10-2018 IPR032808 DoxX family JDM601_1262 963e8c1a33826cc40486c90cbb8933e7 53 Pfam PF05901 Excalibur calcium-binding domain 15 50 1.0E-12 T 12-10-2018 IPR008613 Excalibur calcium-binding domain JDM601_1262 963e8c1a33826cc40486c90cbb8933e7 53 SMART SM00894 14 50 9.3E-15 T 12-10-2018 IPR008613 Excalibur calcium-binding domain JDM601_0007 7a1a3648cc73a91a4da9ef73c82bdc70 282 Pfam PF12089 Transmembrane domain of unknown function (DUF3566) 167 280 1.1E-38 T 12-10-2018 IPR021949 Domain of unknown function DUF3566. transmembrane JDM601_0056 e9099134bb24006245330223183a9247 97 Pfam PF00934 PE family 1 87 5.9E-11 T 12-10-2018 IPR000084 PE-PGRS family, N-terminal JDM601_1358 0f341eabad4d68e07686915388c81006 106 Pfam PF08463 EcoEI R protein C-terminal 7 95 4.2E-12 T 12-10-2018 IPR013670 EcoEI R protein C-terminal domain GO:0003677|GO:0003824|GO:0006304 JDM601_3619 8edb4eedd78ed7dbf07c4851a535d7ce 306 SUPERFAMILY SSF52096 13 266 2.59E-55 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily JDM601_3619 8edb4eedd78ed7dbf07c4851a535d7ce 306 Gene3D G3DSA:3.90.226.10 14 286 3.9E-75 T 12-10-2018 JDM601_3619 8edb4eedd78ed7dbf07c4851a535d7ce 306 Pfam PF00378 Enoyl-CoA hydratase/isomerase 24 251 4.5E-34 T 12-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 JDM601_2095 dfe4ddb084a3808edb3e896c2de361b2 172 Pfam PF06271 RDD family 36 165 3.3E-22 T 12-10-2018 IPR010432 RDD JDM601_3153 e1cb4ef43cb2d459d001cb2af5364c0f 126 Pfam PF14248 Domain of unknown function (DUF4345) 4 117 1.8E-26 T 12-10-2018 IPR025597 Protein of unknown function DUF4345 JDM601_4095 0e9efb68ac9f28039c0cb5164f101fb5 73 Pfam PF09957 Bacterial antitoxin of type II TA system, VapB 2 42 3.8E-10 T 12-10-2018 IPR019239 Bacterial antitoxin of type II TA system, VapB JDM601_4312 b723c86441a0b33fc4ef339c3b2216f7 135 Pfam PF17249 Family of unknown function (DUF5318) 1 121 5.5E-61 T 12-10-2018 IPR035169 Protein of unknown function DUF5318 JDM601_3132 2414d8122cb30ecb080d5a2fc8a97570 479 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 44 200 4.9E-18 T 12-10-2018 IPR038731 Glycosyltransferase RgtA/B/C/D-like JDM601_3791 2e92dd57912af863897194594ee0e436 328 Pfam PF02470 MlaD protein 36 109 1.3E-12 T 12-10-2018 IPR003399 Mce/MlaD JDM601_2390 06abdf181922409cd5f63516034959f9 260 Pfam PF05019 Coenzyme Q (ubiquinone) biosynthesis protein Coq4 42 228 3.7E-20 T 12-10-2018 IPR007715 Ubiquinone biosynthesis protein Coq4 GO:0006744 JDM601_3937 2b49684a2bfb17cc7fa2f89c67475ebb 115 Pfam PF07811 TadE-like protein 12 54 1.1E-4 T 12-10-2018 IPR012495 TadE-like JDM601_3383 784083307fd425a0d8d4f2d0a169633c 72 Pfam PF07362 Post-segregation antitoxin CcdA 4 54 1.9E-6 T 12-10-2018 IPR009956 Post-segregation antitoxin CcdA JDM601_1790 93ecd46ed8c30c652df102ec8a458ea8 222 Pfam PF10056 Uncharacterized conserved protein (DUF2293) 131 217 5.4E-26 T 12-10-2018 IPR018744 Domain of unknown function DUF2293 JDM601_4088 bf7a2fbe7d814451747ed8c989e2400c 81 Pfam PF02697 Putative antitoxin 4 53 3.6E-7 T 12-10-2018 IPR003847 Putative antitoxin JDM601_2843 e3e037f42c97dc180e3726f10b8975cf 169 PRINTS PR01217 Proline rich extensin signature 77 93 8.9E-10 T 12-10-2018 JDM601_2843 e3e037f42c97dc180e3726f10b8975cf 169 PRINTS PR01217 Proline rich extensin signature 96 113 8.9E-10 T 12-10-2018 JDM601_2843 e3e037f42c97dc180e3726f10b8975cf 169 PRINTS PR01217 Proline rich extensin signature 53 74 8.9E-10 T 12-10-2018 JDM601_2843 e3e037f42c97dc180e3726f10b8975cf 169 PRINTS PR01217 Proline rich extensin signature 120 145 8.9E-10 T 12-10-2018 JDM601_1979 4c5244e2a336d0c0488d61c717d6c40c 333 Pfam PF13559 Domain of unknown function (DUF4129) 253 322 7.2E-10 T 12-10-2018 IPR025403 Domain of unknown function DUF4129 JDM601_0867 4cde9e936c0d66fdc8597809158ef7c4 157 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 34 143 1.0E-22 T 12-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 JDM601_0867 4cde9e936c0d66fdc8597809158ef7c4 157 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 32 149 17.744 T 12-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 JDM601_0867 4cde9e936c0d66fdc8597809158ef7c4 157 TIGRFAM TIGR00494 crcB: protein CrcB 34 147 9.0E-24 T 12-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 JDM601_2593 3493a71cf7f5e1d87a0918dbac29be22 361 Pfam PF09995 Uncharacterized protein conserved in bacteria (DUF2236) 29 260 3.2E-33 T 12-10-2018 IPR018713 Domain of unknown function DUF2236 JDM601_2493 8415c8a4c3835e2dc15671092550c679 271 Pfam PF04012 PspA/IM30 family 3 241 2.7E-59 T 12-10-2018 IPR007157 PspA/IM30 JDM601_0924 c1bac2bb83f0e1688420215a2d1190fd 199 Pfam PF08044 Domain of unknown function (DUF1707) 17 68 1.9E-17 T 12-10-2018 IPR012551 Protein of unknown function DUF1707 JDM601_2076 2b0431f52b4d4226eef7cdbb22533b5a 188 Pfam PF04622 ERG2 and Sigma1 receptor like protein 2 175 3.8E-32 T 12-10-2018 IPR006716 ERG2/sigma1 receptor-like JDM601_3457 4d650355558b8196995b20658b460445 293 SUPERFAMILY SSF53213 3 287 2.49E-62 T 12-10-2018 JDM601_3457 4d650355558b8196995b20658b460445 293 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 9 281 1.2E-49 T 12-10-2018 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 JDM601_1546 1a71a62d06b414bfc813a66eaa8289bd 165 ProDom PD033474 ANTIGEN PRECURSOR SIGNAL LIPOPROTEIN LOW WEIGHT MOLECULAR LPPK MEMBRANE PALMITATE 32 157 7.0E-22 T 12-10-2018 IPR020235 Low molecular weight antigen MTB12 JDM601_1264 8ccd6bec54a47068fc0c3da6b998ae34 511 Pfam PF09660 Protein of unknown function (DUF2397) 27 503 3.0E-98 T 12-10-2018 IPR013493 Conserved hypothetical protein CHP02677 JDM601_2165 851ea8a8a8e2efbe41a94c486c102455 706 Pfam PF01757 Acyltransferase family 10 346 2.7E-18 T 12-10-2018 IPR002656 Acyltransferase 3 GO:0016747 JDM601_0602 1d0f3014e852d133f9d8a0ebd20e47c2 573 Pfam PF09369 Domain of unknown function (DUF1998) 373 450 2.1E-14 T 12-10-2018 IPR018973 DEAD/DEAH-box helicase, putative JDM601_1998 f43a032769116bfd05f27da55c7ccec8 417 Pfam PF01757 Acyltransferase family 7 356 2.3E-21 T 12-10-2018 IPR002656 Acyltransferase 3 GO:0016747 JDM601_2118 beaa6fb4ce1655eae5cc6b673c10a43a 316 Pfam PF13280 WYL domain 141 308 1.6E-34 T 12-10-2018 IPR026881 WYL domain JDM601_2118 beaa6fb4ce1655eae5cc6b673c10a43a 316 PIRSF PIRSF016838 1 315 5.7E-107 T 12-10-2018 IPR028349 Protein PafC JDM601_0692 409a12d068de50a1d6b3cadd0a09eca2 125 Pfam PF11259 Protein of unknown function (DUF3060) 55 113 8.7E-21 T 12-10-2018 IPR021417 Protein of unknown function DUF3060 JDM601_0463 1b7c7ab2b77ea767ecbae22b4e542472 206 ProDom PD082580 HEPARIN-BINDING HEMAGGLUTININ ADHESIN GLYCOPROTEIN DIRECT VIRULENCE SEQUENCING CELL ADHESION HOMOLOG 1 159 6.0E-46 T 12-10-2018 IPR020340 Heparin-binding haemagglutinin, bacteria GO:0007155|GO:0008201|GO:0009405|GO:0009986 JDM601_1353 f3075d9d4ea1353f92faaace3ce9ff65 640 SUPERFAMILY SSF52540 226 383 4.92E-5 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase JDM601_2636 993b92e376eb55b1ad5e64c2df37fbb5 443 SUPERFAMILY SSF51905 1 437 7.45E-14 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily JDM601_2438 c61ee3aa756100cf5058111f8c6de902 265 Pfam PF12502 Protein of unknown function (DUF3710) 39 208 1.2E-56 T 12-10-2018 IPR022183 Protein of unknown function DUF3710 JDM601_3578 a42f6e91af689e34c2ada150b61cd989 438 Pfam PF10011 Predicted membrane protein (DUF2254) 11 374 1.3E-98 T 12-10-2018 IPR018723 Protein of unknown function DUF2254, membrane JDM601_3042 d0aca7332d57d40152f0c62ca9ed4f1c 222 Gene3D G3DSA:3.40.960.10 120 219 3.7E-5 T 12-10-2018 JDM601_1102 5a9d21f274c1f94072ab2a5d35813e83 261 Pfam PF02405 Permease MlaE 44 248 3.3E-50 T 12-10-2018 IPR030802 ABC transporter permease MalE GO:0043190 JDM601_2903 52c1e3296693bc25671c37c68ed3f267 257 Pfam PF09995 Uncharacterized protein conserved in bacteria (DUF2236) 3 220 4.7E-30 T 12-10-2018 IPR018713 Domain of unknown function DUF2236 JDM601_2349 8058328a9808656690b999860420223a 411 Pfam PF00872 Transposase, Mutator family 2 378 3.0E-144 T 12-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 JDM601_1721 eac4af3c6c01c1dedd5d6c3a86521879 428 Pfam PF09594 Glycosyltransferase family 87 80 325 1.2E-58 T 12-10-2018 IPR018584 Glycosyltransferase family 87 GO:0016758 JDM601_2927 e371fdacd1d93aecf4c61f6da8283a08 411 SUPERFAMILY SSF50998 53 390 5.1E-5 T 12-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily JDM601_0011 0a94f513e1b5f5261e2f5acd7447091d 92 Pfam PF10756 Bacterial PH domain 12 89 1.1E-17 T 12-10-2018 IPR019692 Protein of unknown function DUF2581 JDM601_0760 859065d54635388a6bfb1d7c9f8f74a4 284 Pfam PF10935 Protein of unknown function (DUF2637) 96 164 2.4E-7 T 12-10-2018 IPR021235 Protein of unknown function DUF2637 JDM601_2881 6d7f464c9ac96c93e7fbb0245b89bff7 372 SUPERFAMILY SSF159245 21 261 2.35E-10 T 12-10-2018 JDM601_1248 f15651097fd7836f12cc3a3aa2da91c8 539 PRINTS PR01228 Eggshell protein signature 170 188 9.6E-7 T 12-10-2018 JDM601_1248 f15651097fd7836f12cc3a3aa2da91c8 539 PRINTS PR01228 Eggshell protein signature 127 137 9.6E-7 T 12-10-2018 JDM601_1248 f15651097fd7836f12cc3a3aa2da91c8 539 PRINTS PR01228 Eggshell protein signature 97 112 9.6E-7 T 12-10-2018 JDM601_1248 f15651097fd7836f12cc3a3aa2da91c8 539 PRINTS PR01228 Eggshell protein signature 19 30 9.6E-7 T 12-10-2018 JDM601_3632 c4073b806d718a7a19c13ba754519bab 254 Pfam PF02405 Permease MlaE 36 247 4.3E-60 T 12-10-2018 IPR030802 ABC transporter permease MalE GO:0043190 JDM601_1717 af80fe030dc827249f7854b0fc791d2d 131 SUPERFAMILY SSF55961 5 92 6.87E-7 T 12-10-2018 JDM601_2299 c413c2e458100e1c515aeb88c6419e21 210 Pfam PF07947 YhhN family 19 196 4.2E-41 T 12-10-2018 IPR012506 YhhN-like GO:0016021 JDM601_2769 500dbb8778a3e2cf2c412761b9d85b2a 460 Pfam PF08237 PE-PPE domain 77 305 3.7E-59 T 12-10-2018 IPR013228 PE-PPE, C-terminal JDM601_1186 c8c66a36133fae1722030d6c85ab116f 55 Pfam PF11314 Protein of unknown function (DUF3117) 4 53 5.7E-29 T 12-10-2018 IPR021465 Protein of unknown function DUF3117 JDM601_2277 637e78b72d0a81b231f5f605295d6f29 576 Pfam PF12077 Transmembrane protein of unknown function (DUF3556) 1 574 2.6E-259 T 12-10-2018 IPR021941 Protein of unknown function DUF3556, transmembrane JDM601_2229 bf766d976c97142bed58ca05168d323d 244 ProDom PD040491 SCO1799 RV1486C/MT1533 MB1522C CGL1536 ML1804 MAV321 2 202 4.0E-45 T 12-10-2018 JDM601_3654 f418a6bf72abc42ca58b6e22f7539d01 659 PRINTS PR01228 Eggshell protein signature 205 223 5.2E-5 T 12-10-2018 JDM601_3654 f418a6bf72abc42ca58b6e22f7539d01 659 PRINTS PR01228 Eggshell protein signature 140 155 5.2E-5 T 12-10-2018 JDM601_3654 f418a6bf72abc42ca58b6e22f7539d01 659 PRINTS PR01228 Eggshell protein signature 170 180 5.2E-5 T 12-10-2018 JDM601_3654 f418a6bf72abc42ca58b6e22f7539d01 659 PRINTS PR01228 Eggshell protein signature 59 70 5.2E-5 T 12-10-2018 JDM601_4156 2f8aeb175557d3acf760d2522e471e8b 350 Pfam PF14219 Domain of unknown function (DUF4328) 143 296 2.4E-29 T 12-10-2018 IPR025565 Domain of unknown function DUF4328 JDM601_0589 7178dc6d958808a1d65fd2ca8b58033f 138 SUPERFAMILY SSF55961 10 110 7.89E-6 T 12-10-2018 JDM601_1949 128bfb78c61f78ce57c73b9c7fd32caf 98 Pfam PF04226 Transglycosylase associated protein 49 97 3.5E-12 T 12-10-2018 IPR007341 Transglycosylase-associated protein GO:0016021 JDM601_2818 4f45dde039a81e5ef8304c1ce40c03d2 149 Pfam PF06271 RDD family 17 102 3.0E-9 T 12-10-2018 IPR010432 RDD JDM601_1588 36e4c932aa6fea4062887948e6853312 290 Gene3D G3DSA:3.40.960.10 191 276 8.2E-6 T 12-10-2018 JDM601_0059 758fbf7858a5d15f7b53c3aae7b5aa6c 352 Pfam PF10774 Domain of unknown function (DUF4226) 2 109 1.1E-38 T 12-10-2018 IPR019710 Protein of unknown function DUF4226 JDM601_1861 db565dc036c594d0ce6c15ec41e5a66e 273 Pfam PF02616 Segregation and condensation protein ScpA 33 257 7.3E-78 T 12-10-2018 IPR003768 Segregation and condensation protein A JDM601_3227 dfa9b35f1a63c659571fb727baec8a29 66 Pfam PF02467 Transcription factor WhiB 1 57 1.2E-18 T 12-10-2018 IPR034768 WhiB-like iron-sulfur binding domain JDM601_0843 3fca2311bf5716e7f0a5e4315c82fad1 332 Pfam PF07804 HipA-like C-terminal domain 56 293 1.8E-50 T 12-10-2018 IPR012893 HipA-like, C-terminal JDM601_2129 894c9646d3543635f67c6ab6727bb630 135 Pfam PF05154 TM2 domain 54 115 6.3E-7 T 12-10-2018 IPR007829 TM2 domain JDM601_1451 7757b3706f739b10ab4d4df83163e26d 377 Pfam PF00487 Fatty acid desaturase 69 333 1.2E-28 T 12-10-2018 IPR005804 Fatty acid desaturase domain GO:0006629 JDM601_2900 4c8dd8d4c5ec9598f30d5e18b7ca7d73 268 Pfam PF12151 Mannan-binding protein 25 57 2.4E-6 T 12-10-2018 IPR021992 Mannan-binding protein JDM601_1770 f6d3bd21c27e3055ca8fcbc93a43895d 270 TIGRFAM TIGR03843 TIGR03843: conserved hypothetical protein 11 270 4.8E-110 T 12-10-2018 IPR022292 Conserved hypothetical protein CHP03843 JDM601_4128 366b7b9c9873fa8cad8ec1332dab7c6c 242 Pfam PF01744 GLTT repeat (6 copies) 68 94 1.8E-5 T 12-10-2018 IPR008164 Repeat of unknown function XGLTT JDM601_3193 2320fd32e79cac10a9910bb9a95e1888 140 Pfam PF05305 Protein of unknown function (DUF732) 8 100 1.3E-21 T 12-10-2018 IPR007969 Domain of unknown function DUF732 JDM601_3947 a590b6d6684c289c850811d065cace3a 165 Pfam PF07332 Putative Actinobacterial Holin-X, holin superfamily III 23 137 1.9E-32 T 12-10-2018 IPR009937 Putative Actinobacterial Holin-X, holin superfamily III JDM601_0169 8b2e3d4e8da90dd5c169f120c205c448 379 Pfam PF01594 AI-2E family transporter 9 333 1.9E-68 T 12-10-2018 IPR002549 Transmembrane protein TqsA-like