locus-tag class description A8A54_00010 PF17243 POTRA domain TamA domain 1 A8A54_00010 PF01103 Surface antigen A8A54_00010 PF07244 Surface antigen variable number repeat A8A54_00020 PF17969 L,D-transpeptidase C-terminal domain A8A54_00020 PF03734 L,D-transpeptidase catalytic domain A8A54_00045 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily A8A54_00050 PF10609 NUBPL iron-transfer P-loop NTPase A8A54_00050 PF01883 Iron-sulfur cluster assembly protein A8A54_00055 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I A8A54_00055 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II A8A54_00055 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III A8A54_00055 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain A8A54_00065 PF01557 Fumarylacetoacetate (FAA) hydrolase family A8A54_00090 PF03006 Haemolysin-III related A8A54_00095 PF14579 Helix-hairpin-helix motif A8A54_00095 PF01336 OB-fold nucleic acid binding domain A8A54_00095 PF02811 PHP domain A8A54_00095 PF07733 Bacterial DNA polymerase III alpha NTPase domain A8A54_00095 PF17657 Bacterial DNA polymerase III alpha subunit finger domain A8A54_00120 PF01047 MarR family A8A54_00130 PF00557 Metallopeptidase family M24 A8A54_00140 PF00764 Arginosuccinate synthase A8A54_00145 PF13847 Methyltransferase domain A8A54_00160 PF04055 Radical SAM superfamily A8A54_00170 PF06803 Protein of unknown function (DUF1232) A8A54_00180 PF01329 Pterin 4 alpha carbinolamine dehydratase A8A54_00195 PF13472 GDSL-like Lipase/Acylhydrolase family A8A54_00200 PF00005 ABC transporter A8A54_00210 PF01027 Inhibitor of apoptosis-promoting Bax1 A8A54_00230 PF00330 Aconitase family (aconitate hydratase) A8A54_00230 PF00694 Aconitase C-terminal domain A8A54_00235 PF00005 ABC transporter A8A54_00240 PF03379 CcmB protein A8A54_00245 PF01578 Cytochrome C assembly protein A8A54_00255 PF08534 Redoxin A8A54_00260 PF00920 Dehydratase family A8A54_00280 PF00990 Diguanylate cyclase, GGDEF domain A8A54_00300 PF00528 Binding-protein-dependent transport system inner membrane component A8A54_00305 PF00528 Binding-protein-dependent transport system inner membrane component A8A54_00310 PF00005 ABC transporter A8A54_00310 PF12857 TOBE-like domain A8A54_00315 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain A8A54_00315 PF06165 Glycosyltransferase family 36 A8A54_00315 PF10091 Putative glucoamylase A8A54_00320 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain A8A54_00320 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family A8A54_00325 PF02567 Phenazine biosynthesis-like protein A8A54_00330 PF08241 Methyltransferase domain A8A54_00335 PF00294 pfkB family carbohydrate kinase A8A54_00345 PF00912 Transglycosylase A8A54_00345 PF00905 Penicillin binding protein transpeptidase domain A8A54_00350 PF13505 Outer membrane protein beta-barrel domain A8A54_00360 PF00476 DNA polymerase family A A8A54_00360 PF01612 3'-5' exonuclease A8A54_00365 PF07687 Peptidase dimerisation domain A8A54_00365 PF01546 Peptidase family M20/M25/M40 A8A54_00375 PF01612 3'-5' exonuclease A8A54_00375 PF00476 DNA polymerase family A A8A54_00375 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain A8A54_00375 PF01367 5'-3' exonuclease, C-terminal SAM fold A8A54_00380 PF00271 Helicase conserved C-terminal domain A8A54_00380 PF00270 DEAD/DEAH box helicase A8A54_00390 PF00204 DNA gyrase B A8A54_00390 PF00986 DNA gyrase B subunit, carboxyl terminus A8A54_00390 PF01751 Toprim domain A8A54_00390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A8A54_00395 PF00067 Cytochrome P450 A8A54_00400 PF00293 NUDIX domain A8A54_00405 PF00756 Putative esterase A8A54_00415 PF13673 Acetyltransferase (GNAT) domain A8A54_00420 PF08240 Alcohol dehydrogenase GroES-like domain A8A54_00420 PF00107 Zinc-binding dehydrogenase A8A54_00425 PF02583 Metal-sensitive transcriptional repressor A8A54_00430 PF13673 Acetyltransferase (GNAT) domain A8A54_00435 PF08482 ATP-dependent helicase C-terminal A8A54_00435 PF00271 Helicase conserved C-terminal domain A8A54_00435 PF04408 Helicase associated domain (HA2) A8A54_00435 PF00270 DEAD/DEAH box helicase A8A54_00445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A8A54_00445 PF00512 His Kinase A (phospho-acceptor) domain A8A54_00450 PF00072 Response regulator receiver domain A8A54_00460 PF17969 L,D-transpeptidase C-terminal domain A8A54_00460 PF03734 L,D-transpeptidase catalytic domain A8A54_00460 PF01476 LysM domain A8A54_00465 PF01106 NifU-like domain A8A54_00475 PF00579 tRNA synthetases class I (W and Y) A8A54_00480 PF03023 Lipid II flippase MurJ A8A54_00485 PF01966 HD domain A8A54_00485 PF08335 GlnD PII-uridylyltransferase A8A54_00485 PF01842 ACT domain A8A54_00490 PF01515 Phosphate acetyl/butaryl transferase A8A54_00490 PF03949 Malic enzyme, NAD binding domain A8A54_00490 PF00390 Malic enzyme, N-terminal domain A8A54_00495 PF05192 MutS domain III A8A54_00495 PF05188 MutS domain II A8A54_00495 PF00488 MutS domain V A8A54_00495 PF05190 MutS family domain IV A8A54_00495 PF01624 MutS domain I A8A54_00505 PF01252 Signal peptidase (SPase) II A8A54_00510 PF00588 SpoU rRNA Methylase family A8A54_00510 PF08032 RNA 2'-O ribose methyltransferase substrate binding A8A54_00515 PF01170 Putative RNA methylase family UPF0020 A8A54_00515 PF02926 THUMP domain A8A54_00515 PF10672 S-adenosylmethionine-dependent methyltransferase A8A54_00525 PF00216 Bacterial DNA-binding protein A8A54_00530 PF01343 Peptidase family S49 A8A54_00540 PF03968 OstA-like protein A8A54_00545 PF00005 ABC transporter A8A54_00550 PF04552 Sigma-54, DNA binding domain A8A54_00550 PF04963 Sigma-54 factor, core binding domain A8A54_00550 PF00309 Sigma-54 factor, Activator interacting domain (AID) A8A54_00555 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein A8A54_00555 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus A8A54_00560 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 A8A54_00570 PF00011 Hsp20/alpha crystallin family A8A54_00580 PF00633 Helix-hairpin-helix motif A8A54_00580 PF10576 Iron-sulfur binding domain of endonuclease III A8A54_00580 PF00730 HhH-GPD superfamily base excision DNA repair protein A8A54_00590 PF00294 pfkB family carbohydrate kinase A8A54_00595 PF03458 UPF0126 domain A8A54_00600 PF01025 GrpE A8A54_00605 PF01628 HrcA protein C terminal domain A8A54_00610 PF01138 3' exoribonuclease family, domain 1 A8A54_00610 PF03725 3' exoribonuclease family, domain 2 A8A54_00620 PF01725 Ham1 family A8A54_00625 PF06969 HemN C-terminal domain A8A54_00625 PF04055 Radical SAM superfamily A8A54_00630 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases A8A54_00635 PF02021 Uncharacterised protein family UPF0102 A8A54_00640 PF10414 Sirohaem synthase dimerisation region A8A54_00640 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases A8A54_00650 PF01077 Nitrite and sulphite reductase 4Fe-4S domain A8A54_00650 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain A8A54_00655 PF01507 Phosphoadenosine phosphosulfate reductase family A8A54_00670 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain A8A54_00685 PF02310 B12 binding domain A8A54_00685 PF02607 B12 binding domain A8A54_00685 PF02574 Homocysteine S-methyltransferase A8A54_00685 PF00809 Pterin binding enzyme A8A54_00685 PF02965 Vitamin B12 dependent methionine synthase, activation domain A8A54_00690 PF03472 Autoinducer binding domain A8A54_00690 PF00196 Bacterial regulatory proteins, luxR family A8A54_00700 PF01507 Phosphoadenosine phosphosulfate reductase family A8A54_00705 PF00009 Elongation factor Tu GTP binding domain A8A54_00710 PF00459 Inositol monophosphatase family A8A54_00725 PF00072 Response regulator receiver domain A8A54_00725 PF00196 Bacterial regulatory proteins, luxR family A8A54_00740 PF00455 DeoR C terminal sensor domain A8A54_00740 PF08220 DeoR-like helix-turn-helix domain A8A54_00745 PF16901 C-terminal domain of alpha-glycerophosphate oxidase A8A54_00745 PF01266 FAD dependent oxidoreductase A8A54_00755 PF00171 Aldehyde dehydrogenase family A8A54_00760 PF08240 Alcohol dehydrogenase GroES-like domain A8A54_00760 PF00107 Zinc-binding dehydrogenase A8A54_00770 PF00356 Bacterial regulatory proteins, lacI family A8A54_00775 PF00664 ABC transporter transmembrane region A8A54_00775 PF00005 ABC transporter A8A54_00780 PF00528 Binding-protein-dependent transport system inner membrane component A8A54_00785 PF03070 TENA/THI-4/PQQC family A8A54_00790 PF09084 NMT1/THI5 like A8A54_00795 PF02581 Thiamine monophosphate synthase A8A54_00800 PF05690 Thiazole biosynthesis protein ThiG A8A54_00810 PF01266 FAD dependent oxidoreductase A8A54_00815 PF08543 Phosphomethylpyrimidine kinase A8A54_00820 PF00990 Diguanylate cyclase, GGDEF domain A8A54_00820 PF08448 PAS fold A8A54_00820 PF00563 EAL domain A8A54_00820 PF08447 PAS fold A8A54_00825 PF00403 Heavy-metal-associated domain A8A54_00830 PF01011 PQQ enzyme repeat A8A54_00835 PF09278 MerR, DNA binding A8A54_00835 PF00376 MerR family regulatory protein A8A54_00840 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain A8A54_00840 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase A8A54_00850 PF01266 FAD dependent oxidoreductase A8A54_00855 PF04267 Sarcosine oxidase, delta subunit family A8A54_00860 PF01571 Aminomethyltransferase folate-binding domain A8A54_00860 PF17806 Sarcosine oxidase A3 domain A8A54_00860 PF07992 Pyridine nucleotide-disulphide oxidoreductase A8A54_00860 PF08669 Glycine cleavage T-protein C-terminal barrel domain A8A54_00870 PF02515 CoA-transferase family III A8A54_00895 PF00528 Binding-protein-dependent transport system inner membrane component A8A54_00900 PF00528 Binding-protein-dependent transport system inner membrane component A8A54_00905 PF17912 MalK OB fold domain A8A54_00905 PF00005 ABC transporter A8A54_00910 PF13378 Enolase C-terminal domain-like A8A54_00910 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain A8A54_00915 PF05336 L-rhamnose mutarotase A8A54_00935 PF01557 Fumarylacetoacetate (FAA) hydrolase family A8A54_00940 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain A8A54_00940 PF13378 Enolase C-terminal domain-like A8A54_00950 PF00990 Diguanylate cyclase, GGDEF domain A8A54_00950 PF13426 PAS domain A8A54_00950 PF00563 EAL domain A8A54_00955 PF00881 Nitroreductase family A8A54_00965 PF03884 DNA gyrase inhibitor YacG A8A54_00970 PF02545 Maf-like protein A8A54_00975 PF01176 Translation initiation factor 1A / IF-1 A8A54_00980 PF01451 Low molecular weight phosphotyrosine protein phosphatase A8A54_00985 PF06793 Uncharacterised protein family (UPF0262) A8A54_00990 PF00815 Histidinol dehydrogenase A8A54_01000 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) A8A54_01020 PF00512 His Kinase A (phospho-acceptor) domain A8A54_01020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A8A54_01025 PF13533 Biotin-lipoyl like A8A54_01030 PF00873 AcrB/AcrD/AcrF family A8A54_01035 PF09084 NMT1/THI5 like A8A54_01040 PF00528 Binding-protein-dependent transport system inner membrane component A8A54_01045 PF00528 Binding-protein-dependent transport system inner membrane component A8A54_01050 PF00005 ABC transporter A8A54_01055 PF01979 Amidohydrolase family A8A54_01060 PF01546 Peptidase family M20/M25/M40 A8A54_01060 PF07687 Peptidase dimerisation domain A8A54_01065 PF08362 YcdC-like protein, C-terminal region A8A54_01065 PF00440 Bacterial regulatory proteins, tetR family A8A54_01070 PF00293 NUDIX domain A8A54_01075 PF00005 ABC transporter A8A54_01075 PF17912 MalK OB fold domain A8A54_01080 PF00528 Binding-protein-dependent transport system inner membrane component A8A54_01085 PF00528 Binding-protein-dependent transport system inner membrane component A8A54_01095 PF01053 Cys/Met metabolism PLP-dependent enzyme A8A54_01100 PF00392 Bacterial regulatory proteins, gntR family A8A54_01100 PF07729 FCD domain A8A54_01105 PF00248 Aldo/keto reductase family A8A54_01110 PF00294 pfkB family carbohydrate kinase A8A54_01115 PF00701 Dihydrodipicolinate synthetase family A8A54_01130 PF00528 Binding-protein-dependent transport system inner membrane component A8A54_01135 PF00528 Binding-protein-dependent transport system inner membrane component A8A54_01140 PF17912 MalK OB fold domain A8A54_01140 PF03459 TOBE domain A8A54_01140 PF00005 ABC transporter A8A54_01145 PF01180 Dihydroorotate dehydrogenase A8A54_01150 PF07992 Pyridine nucleotide-disulphide oxidoreductase A8A54_01150 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster A8A54_01155 PF00892 EamA-like transporter family A8A54_01165 PF00342 Phosphoglucose isomerase A8A54_01175 PF13419 Haloacid dehalogenase-like hydrolase A8A54_01185 PF13193 AMP-binding enzyme C-terminal domain A8A54_01185 PF00501 AMP-binding enzyme A8A54_01190 PF08361 MAATS-type transcriptional repressor, C-terminal region A8A54_01190 PF00440 Bacterial regulatory proteins, tetR family A8A54_01195 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion A8A54_01200 PF00873 AcrB/AcrD/AcrF family A8A54_01215 PF03976 Polyphosphate kinase 2 (PPK2) A8A54_01220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A8A54_01220 PF16736 Single Cache-like A8A54_01220 PF00989 PAS fold A8A54_01220 PF00512 His Kinase A (phospho-acceptor) domain A8A54_01230 PF00202 Aminotransferase class-III A8A54_01235 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain A8A54_01235 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain A8A54_01240 PF01430 Hsp33 protein A8A54_01245 PF04379 ApaG domain A8A54_01250 PF01053 Cys/Met metabolism PLP-dependent enzyme A8A54_01255 PF00692 dUTPase A8A54_01260 PF12833 Helix-turn-helix domain A8A54_01260 PF01965 DJ-1/PfpI family A8A54_01275 PF01554 MatE A8A54_01280 PF01180 Dihydroorotate dehydrogenase A8A54_01295 PF00072 Response regulator receiver domain A8A54_01295 PF09456 RcsC Alpha-Beta-Loop (ABL) A8A54_01295 PF00512 His Kinase A (phospho-acceptor) domain A8A54_01295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A8A54_01300 PF00196 Bacterial regulatory proteins, luxR family A8A54_01300 PF00072 Response regulator receiver domain A8A54_01305 PF00561 alpha/beta hydrolase fold A8A54_01310 PF01741 Large-conductance mechanosensitive channel, MscL A8A54_01320 PF08279 HTH domain A8A54_01320 PF13280 WYL domain A8A54_01330 PF00155 Aminotransferase class I and II A8A54_01335 PF01522 Polysaccharide deacetylase A8A54_01355 PF03466 LysR substrate binding domain A8A54_01355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A8A54_01360 PF03788 LrgA family A8A54_01370 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily A8A54_01375 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily A8A54_01385 PF02569 Pantoate-beta-alanine ligase A8A54_01390 PF02548 Ketopantoate hydroxymethyltransferase A8A54_01395 PF00440 Bacterial regulatory proteins, tetR family A8A54_01395 PF16925 Tetracyclin repressor-like, C-terminal domain A8A54_01405 PF00132 Bacterial transferase hexapeptide (six repeats) A8A54_01415 PF00175 Oxidoreductase NAD-binding domain A8A54_01415 PF00970 Oxidoreductase FAD-binding domain A8A54_01420 PF07690 Major Facilitator Superfamily A8A54_01425 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain A8A54_01430 PF03435 Saccharopine dehydrogenase NADP binding domain A8A54_01430 PF16653 Saccharopine dehydrogenase C-terminal domain A8A54_01435 PF05544 Proline racemase A8A54_01440 PF01554 MatE A8A54_01445 PF06776 Invasion associated locus B (IalB) protein A8A54_01450 PF02530 Porin subfamily A8A54_01455 PF07883 Cupin domain A8A54_01455 PF05899 Protein of unknown function (DUF861) A8A54_01460 PF09349 OHCU decarboxylase A8A54_01460 PF01014 Uricase A8A54_01465 PF00576 HIUase/Transthyretin family A8A54_01470 PF01799 [2Fe-2S] binding domain A8A54_01470 PF00111 2Fe-2S iron-sulfur cluster binding domain A8A54_01475 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain A8A54_01475 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase A8A54_01485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A8A54_01485 PF03466 LysR substrate binding domain A8A54_01495 PF01979 Amidohydrolase family A8A54_01500 PF09339 IclR helix-turn-helix domain A8A54_01500 PF01614 Bacterial transcriptional regulator A8A54_01505 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain A8A54_01505 PF00205 Thiamine pyrophosphate enzyme, central domain A8A54_01505 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain A8A54_01510 PF01261 Xylose isomerase-like TIM barrel A8A54_01515 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase A8A54_01515 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase A8A54_01520 PF05161 MOFRL family A8A54_01520 PF13660 Domain of unknown function (DUF4147) A8A54_01525 PF03597 Cytochrome oxidase maturation protein cbb3-type A8A54_01535 PF05751 FixH A8A54_01540 PF13746 4Fe-4S dicluster domain A8A54_01540 PF12801 4Fe-4S binding domain A8A54_01540 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase A8A54_01545 PF13442 Cytochrome C oxidase, cbb3-type, subunit III A8A54_01545 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP A8A54_01560 PF00115 Cytochrome C and Quinol oxidase polypeptide I A8A54_01565 PF01475 Ferric uptake regulator family A8A54_01570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A8A54_01570 PF08521 Two-component sensor kinase N-terminal A8A54_01570 PF00512 His Kinase A (phospho-acceptor) domain A8A54_01575 PF00486 Transcriptional regulatory protein, C terminal A8A54_01575 PF00072 Response regulator receiver domain A8A54_01580 PF02683 Cytochrome C biogenesis protein transmembrane region A8A54_01580 PF11412 Disulphide bond corrector protein DsbC A8A54_01585 PF03734 L,D-transpeptidase catalytic domain A8A54_01585 PF01476 LysM domain A8A54_01590 PF06965 Na+/H+ antiporter 1 A8A54_01590 PF13462 Thioredoxin A8A54_01595 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain A8A54_01595 PF02805 Metal binding domain of Ada A8A54_01595 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain A8A54_01595 PF12833 Helix-turn-helix domain A8A54_01600 PF09859 Oxygenase, catalysing oxidative methylation of damaged DNA A8A54_01605 PF03960 ArsC family A8A54_01615 PF06779 Uncharacterised MFS-type transporter YbfB A8A54_01620 PF05992 SbmA/BacA-like family A8A54_01635 PF01926 50S ribosome-binding GTPase A8A54_01635 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal A8A54_01640 PF07690 Major Facilitator Superfamily A8A54_01670 PF02583 Metal-sensitive transcriptional repressor A8A54_01675 PF01545 Cation efflux family A8A54_01680 PF00012 Hsp70 protein A8A54_01710 PF00119 ATP synthase A chain A8A54_01715 PF00137 ATP synthase subunit C A8A54_01720 PF00430 ATP synthase B/B' CF(0) A8A54_01725 PF00430 ATP synthase B/B' CF(0) A8A54_01730 PF01037 Lrp/AsnC ligand binding domain A8A54_01735 PF01810 LysE type translocator A8A54_01740 PF01351 Ribonuclease HII A8A54_01745 PF04055 Radical SAM superfamily A8A54_01765 PF08544 GHMP kinases C terminal A8A54_01765 PF00288 GHMP kinases N terminal domain A8A54_01775 PF06965 Na+/H+ antiporter 1 A8A54_01775 PF01343 Peptidase family S49 A8A54_01780 PF06965 Na+/H+ antiporter 1 A8A54_01805 PF00348 Polyprenyl synthetase A8A54_01815 PF02091 Glycyl-tRNA synthetase alpha subunit A8A54_01820 PF02092 Glycyl-tRNA synthetase beta subunit A8A54_01820 PF05746 DALR anticodon binding domain A8A54_01825 PF01300 Telomere recombination A8A54_01825 PF03481 Putative GTP-binding controlling metal-binding A8A54_01830 PF01565 FAD binding domain A8A54_01830 PF02913 FAD linked oxidases, C-terminal domain A8A54_01840 PF00378 Enoyl-CoA hydratase/isomerase A8A54_01845 PF00441 Acyl-CoA dehydrogenase, C-terminal domain A8A54_01845 PF02771 Acyl-CoA dehydrogenase, N-terminal domain A8A54_01845 PF02770 Acyl-CoA dehydrogenase, middle domain A8A54_01845 PF12806 Acetyl-CoA dehydrogenase C-terminal like A8A54_01855 PF00893 Small Multidrug Resistance protein A8A54_01860 PF00990 Diguanylate cyclase, GGDEF domain A8A54_01865 PF02844 Phosphoribosylglycinamide synthetase, N domain A8A54_01865 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain A8A54_01865 PF02843 Phosphoribosylglycinamide synthetase, C domain A8A54_01870 PF01040 UbiA prenyltransferase family A8A54_01875 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region A8A54_01875 PF01243 Pyridoxamine 5'-phosphate oxidase A8A54_01880 PF13472 GDSL-like Lipase/Acylhydrolase family A8A54_01880 PF07859 alpha/beta hydrolase fold A8A54_01890 PF00226 DnaJ domain A8A54_01890 PF01556 DnaJ C terminal domain A8A54_01890 PF00684 DnaJ central domain A8A54_01900 PF00300 Histidine phosphatase superfamily (branch 1) A8A54_01925 PF01264 Chorismate synthase A8A54_01930 PF00925 GTP cyclohydrolase II A8A54_01930 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase A8A54_01935 PF00850 Histone deacetylase domain A8A54_01940 PF02609 Exonuclease VII small subunit A8A54_01945 PF09335 SNARE associated Golgi protein A8A54_01950 PF04226 Transglycosylase associated protein A8A54_01960 PF02678 Pirin A8A54_01960 PF05726 Pirin C-terminal cupin domain A8A54_01965 PF02780 Transketolase, C-terminal domain A8A54_01965 PF02779 Transketolase, pyrimidine binding domain A8A54_01965 PF13292 1-deoxy-D-xylulose-5-phosphate synthase A8A54_01970 PF01479 S4 domain A8A54_01970 PF01728 FtsJ-like methyltransferase A8A54_01975 PF05958 tRNA (Uracil-5-)-methyltransferase A8A54_01990 PF01177 Asp/Glu/Hydantoin racemase A8A54_01995 PF03641 Possible lysine decarboxylase A8A54_02000 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme A8A54_02005 PF01476 LysM domain A8A54_02015 PF00664 ABC transporter transmembrane region A8A54_02015 PF00005 ABC transporter A8A54_02020 PF02666 Phosphatidylserine decarboxylase A8A54_02025 PF01066 CDP-alcohol phosphatidyltransferase A8A54_02035 PF00106 short chain dehydrogenase A8A54_02040 PF13537 Glutamine amidotransferase domain A8A54_02040 PF00156 Phosphoribosyl transferase domain A8A54_02050 PF18073 Rubredoxin metal binding domain A8A54_02050 PF06745 KaiC A8A54_02055 PF00772 DnaB-like helicase N terminal domain A8A54_02055 PF03796 DnaB-like helicase C terminal domain A8A54_02070 PF01281 Ribosomal protein L9, N-terminal domain A8A54_02070 PF03948 Ribosomal protein L9, C-terminal domain A8A54_02080 PF01084 Ribosomal protein S18 A8A54_02085 PF01250 Ribosomal protein S6 A8A54_02090 PF00698 Acyl transferase domain A8A54_02100 PF00550 Phosphopantetheine attachment site A8A54_02105 PF02801 Beta-ketoacyl synthase, C-terminal domain A8A54_02105 PF00109 Beta-ketoacyl synthase, N-terminal domain A8A54_02110 PF02618 YceG-like family A8A54_02115 PF03755 YicC-like family, N-terminal region A8A54_02115 PF08340 Domain of unknown function (DUF1732) A8A54_02120 PF00625 Guanylate kinase A8A54_02130 PF00132 Bacterial transferase hexapeptide (six repeats) A8A54_02150 PF01523 Putative modulator of DNA gyrase A8A54_02160 PF02790 Cytochrome C oxidase subunit II, transmembrane domain A8A54_02160 PF00116 Cytochrome C oxidase subunit II, periplasmic domain A8A54_02165 PF00115 Cytochrome C and Quinol oxidase polypeptide I A8A54_02170 PF01040 UbiA prenyltransferase family A8A54_02180 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 A8A54_02185 PF00510 Cytochrome c oxidase subunit III A8A54_02195 PF02104 SURF1 family A8A54_02200 PF02401 LytB protein A8A54_02205 PF01636 Phosphotransferase enzyme family A8A54_02210 PF00075 RNase H A8A54_02215 PF07690 Major Facilitator Superfamily A8A54_02220 PF03466 LysR substrate binding domain A8A54_02220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A8A54_02225 PF08534 Redoxin A8A54_02240 PF02622 Uncharacterized ACR, COG1678 A8A54_02245 PF03707 Bacterial signalling protein N terminal repeat A8A54_02245 PF00990 Diguanylate cyclase, GGDEF domain A8A54_02245 PF00563 EAL domain A8A54_02250 PF13302 Acetyltransferase (GNAT) domain A8A54_02255 PF05193 Peptidase M16 inactive domain A8A54_02255 PF00675 Insulinase (Peptidase family M16) A8A54_02260 PF00291 Pyridoxal-phosphate dependent enzyme A8A54_02260 PF14821 Threonine synthase N terminus A8A54_02270 PF12792 CSS motif domain associated with EAL A8A54_02270 PF00563 EAL domain A8A54_02285 PF00654 Voltage gated chloride channel A8A54_02290 PF01555 DNA methylase A8A54_02290 PF18755 Restriction Enzyme Adenine Methylase Associated A8A54_02300 PF14815 NUDIX domain A8A54_02300 PF00633 Helix-hairpin-helix motif A8A54_02300 PF00730 HhH-GPD superfamily base excision DNA repair protein A8A54_02315 PF01370 NAD dependent epimerase/dehydratase family A8A54_02330 PF02463 RecF/RecN/SMC N terminal domain A8A54_02350 PF00583 Acetyltransferase (GNAT) family A8A54_02355 PF00391 PEP-utilising enzyme, mobile domain A8A54_02355 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain A8A54_02355 PF02896 PEP-utilising enzyme, TIM barrel domain A8A54_02380 PF02632 BioY family A8A54_02385 PF04115 Ureidoglycolate lyase A8A54_02390 PF00576 HIUase/Transthyretin family A8A54_02400 PF02311 AraC-like ligand binding domain A8A54_02400 PF12833 Helix-turn-helix domain A8A54_02405 PF00171 Aldehyde dehydrogenase family A8A54_02410 PF00732 GMC oxidoreductase A8A54_02410 PF05199 GMC oxidoreductase A8A54_02415 PF00440 Bacterial regulatory proteins, tetR family A8A54_02415 PF13977 BetI-type transcriptional repressor, C-terminal A8A54_02420 PF03449 Transcription elongation factor, N-terminal A8A54_02420 PF01272 Transcription elongation factor, GreA/GreB, C-term A8A54_02425 PF01544 CorA-like Mg2+ transporter protein A8A54_02430 PF00392 Bacterial regulatory proteins, gntR family A8A54_02430 PF07729 FCD domain A8A54_02435 PF07690 Major Facilitator Superfamily A8A54_02445 PF05872 Bacterial protein of unknown function (DUF853) A8A54_02450 PF03734 L,D-transpeptidase catalytic domain A8A54_02450 PF17969 L,D-transpeptidase C-terminal domain A8A54_02455 PF13419 Haloacid dehalogenase-like hydrolase A8A54_02460 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain A8A54_02460 PF02777 Iron/manganese superoxide dismutases, C-terminal domain A8A54_02465 PF01322 Cytochrome C' A8A54_02470 PF00034 Cytochrome c A8A54_02485 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain A8A54_02485 PF00326 Prolyl oligopeptidase family A8A54_02490 PF01641 SelR domain A8A54_02495 PF05443 ROS/MUCR transcriptional regulator protein A8A54_02515 PF01425 Amidase A8A54_02520 PF02657 Fe-S metabolism associated domain A8A54_02530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A8A54_02530 PF00512 His Kinase A (phospho-acceptor) domain A8A54_02560 PF00912 Transglycosylase A8A54_02560 PF00905 Penicillin binding protein transpeptidase domain A8A54_02575 PF04860 Phage portal protein A8A54_02655 PF00072 Response regulator receiver domain A8A54_02655 PF00486 Transcriptional regulatory protein, C terminal A8A54_02660 PF00672 HAMP domain A8A54_02660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A8A54_02660 PF00512 His Kinase A (phospho-acceptor) domain A8A54_02675 PF03100 CcmE A8A54_02680 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal A8A54_02680 PF01578 Cytochrome C assembly protein A8A54_02685 PF03918 Cytochrome C biogenesis protein A8A54_02690 PF13180 PDZ domain A8A54_02695 PF00072 Response regulator receiver domain A8A54_02695 PF00486 Transcriptional regulatory protein, C terminal A8A54_02700 PF00672 HAMP domain A8A54_02700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A8A54_02700 PF00512 His Kinase A (phospho-acceptor) domain A8A54_02705 PF03710 Glutamate-ammonia ligase adenylyltransferase A8A54_02705 PF08335 GlnD PII-uridylyltransferase A8A54_02710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A8A54_02710 PF00512 His Kinase A (phospho-acceptor) domain A8A54_02710 PF00989 PAS fold A8A54_02715 PF11940 Domain of unknown function (DUF3458) Ig-like fold A8A54_02715 PF17432 Domain of unknown function (DUF3458_C) ARM repeats A8A54_02715 PF01433 Peptidase family M1 domain A8A54_02730 PF03167 Uracil DNA glycosylase superfamily A8A54_02740 PF03372 Endonuclease/Exonuclease/phosphatase family A8A54_02745 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus A8A54_02745 PF01048 Phosphorylase superfamily A8A54_02750 PF02798 Glutathione S-transferase, N-terminal domain A8A54_02750 PF00043 Glutathione S-transferase, C-terminal domain A8A54_02785 PF00155 Aminotransferase class I and II A8A54_02790 PF00589 Phage integrase family A8A54_02790 PF02899 Phage integrase, N-terminal SAM-like domain A8A54_02795 PF02530 Porin subfamily A8A54_02805 PF02530 Porin subfamily A8A54_02815 PF00318 Ribosomal protein S2 A8A54_02820 PF14718 Soluble lytic murein transglycosylase L domain A8A54_02820 PF01464 Transglycosylase SLT domain A8A54_02825 PF00701 Dihydrodipicolinate synthetase family A8A54_02830 PF01668 SmpB protein A8A54_02840 PF01192 RNA polymerase Rpb6 A8A54_02845 PF04607 Region found in RelA / SpoT proteins A8A54_02845 PF13291 ACT domain A8A54_02845 PF02824 TGS domain A8A54_02850 PF00156 Phosphoribosyl transferase domain A8A54_02855 PF13545 Crp-like helix-turn-helix domain A8A54_02855 PF00027 Cyclic nucleotide-binding domain A8A54_02860 PF04055 Radical SAM superfamily A8A54_02865 PF07690 Major Facilitator Superfamily A8A54_02870 PF02311 AraC-like ligand binding domain A8A54_02870 PF12833 Helix-turn-helix domain A8A54_02880 PF01648 4'-phosphopantetheinyl transferase superfamily A8A54_02885 PF10502 Signal peptidase, peptidase S26 A8A54_02890 PF14622 Ribonuclease-III-like A8A54_02890 PF00035 Double-stranded RNA binding motif A8A54_02895 PF01926 50S ribosome-binding GTPase A8A54_02895 PF07650 KH domain A8A54_02900 PF02565 Recombination protein O C terminal A8A54_02900 PF11967 Recombination protein O N terminal A8A54_02910 PF01966 HD domain A8A54_02920 PF01979 Amidohydrolase family A8A54_02925 PF00857 Isochorismatase family A8A54_02930 PF01965 DJ-1/PfpI family A8A54_02930 PF12833 Helix-turn-helix domain A8A54_02945 PF00293 NUDIX domain A8A54_02960 PF01406 tRNA synthetases class I (C) catalytic domain A8A54_02970 PF00682 HMGL-like A8A54_02970 PF08502 LeuA allosteric (dimerisation) domain A8A54_02975 PF00892 EamA-like transporter family A8A54_02980 PF01551 Peptidase family M23 A8A54_02985 PF00398 Ribosomal RNA adenine dimethylase A8A54_02990 PF04166 Pyridoxal phosphate biosynthetic protein PdxA A8A54_02995 PF00639 PPIC-type PPIASE domain A8A54_02995 PF09312 SurA N-terminal domain A8A54_03000 PF03968 OstA-like protein A8A54_03000 PF04453 LPS transport system D A8A54_03015 PF00883 Cytosol aminopeptidase family, catalytic domain A8A54_03015 PF02789 Cytosol aminopeptidase family, N-terminal domain A8A54_03030 PF00005 ABC transporter A8A54_03030 PF12848 ABC transporter A8A54_03040 PF00334 Nucleoside diphosphate kinase A8A54_03050 PF02391 MoaE protein A8A54_03055 PF02597 ThiS family A8A54_03060 PF01066 CDP-alcohol phosphatidyltransferase A8A54_03065 PF12826 Helix-hairpin-helix motif A8A54_03065 PF02151 UvrB/uvrC motif A8A54_03065 PF01541 GIY-YIG catalytic domain A8A54_03065 PF08459 UvrC Helix-hairpin-helix N-terminal A8A54_03075 PF13505 Outer membrane protein beta-barrel domain A8A54_03085 PF00445 Ribonuclease T2 family A8A54_03095 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ A8A54_03105 PF00384 Molybdopterin oxidoreductase A8A54_03105 PF04879 Molybdopterin oxidoreductase Fe4S4 domain A8A54_03105 PF01568 Molydopterin dinucleotide binding domain A8A54_03115 PF00551 Formyl transferase A8A54_03120 PF02769 AIR synthase related protein, C-terminal domain A8A54_03120 PF00586 AIR synthase related protein, N-terminal domain A8A54_03125 PF01594 AI-2E family transporter A8A54_03135 PF01370 NAD dependent epimerase/dehydratase family A8A54_03165 PF01810 LysE type translocator A8A54_03180 PF01053 Cys/Met metabolism PLP-dependent enzyme A8A54_03185 PF01569 PAP2 superfamily A8A54_03190 PF00497 Bacterial extracellular solute-binding proteins, family 3 A8A54_03195 PF00528 Binding-protein-dependent transport system inner membrane component A8A54_03200 PF00528 Binding-protein-dependent transport system inner membrane component A8A54_03205 PF00005 ABC transporter A8A54_03230 PF01638 HxlR-like helix-turn-helix A8A54_03245 PF01494 FAD binding domain A8A54_03255 PF13089 Polyphosphate kinase N-terminal domain A8A54_03255 PF17941 Polyphosphate kinase C-terminal domain 1 A8A54_03255 PF02503 Polyphosphate kinase middle domain A8A54_03255 PF13090 Polyphosphate kinase C-terminal domain 2 A8A54_03265 PF00570 HRDC domain A8A54_03265 PF01612 3'-5' exonuclease A8A54_03270 PF01336 OB-fold nucleic acid binding domain A8A54_03270 PF00152 tRNA synthetases class II (D, K and N) A8A54_03270 PF02938 GAD domain A8A54_03280 PF03989 DNA gyrase C-terminal domain, beta-propeller A8A54_03280 PF00521 DNA gyrase/topoisomerase IV, subunit A A8A54_03285 PF04376 Arginine-tRNA-protein transferase, N terminus A8A54_03285 PF04377 Arginine-tRNA-protein transferase, C terminus A8A54_03295 PF00490 Delta-aminolevulinic acid dehydratase A8A54_03315 PF03734 L,D-transpeptidase catalytic domain A8A54_03320 PF00464 Serine hydroxymethyltransferase A8A54_03325 PF03477 ATP cone domain A8A54_03330 PF01872 RibD C-terminal domain A8A54_03330 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region A8A54_03335 PF00677 Lumazine binding domain A8A54_03340 PF00885 6,7-dimethyl-8-ribityllumazine synthase A8A54_03345 PF01029 NusB family A8A54_03350 PF03030 Inorganic H+ pyrophosphatase A8A54_03355 PF04355 SmpA / OmlA family A8A54_03370 PF02504 Fatty acid synthesis protein A8A54_03375 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal A8A54_03375 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III A8A54_03380 PF00216 Bacterial DNA-binding protein A8A54_03385 PF13411 MerR HTH family regulatory protein A8A54_03390 PF00893 Small Multidrug Resistance protein A8A54_03395 PF00119 ATP synthase A chain A8A54_03415 PF01914 MarC family integral membrane protein A8A54_03420 PF02694 Uncharacterised BCR, YnfA/UPF0060 family A8A54_03430 PF02397 Bacterial sugar transferase A8A54_03435 PF13439 Glycosyltransferase Family 4 A8A54_03435 PF00534 Glycosyl transferases group 1 A8A54_03460 PF02628 Cytochrome oxidase assembly protein A8A54_03465 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase A8A54_03470 PF01118 Semialdehyde dehydrogenase, NAD binding domain A8A54_03475 PF00491 Arginase family A8A54_03480 PF03992 Antibiotic biosynthesis monooxygenase A8A54_03485 PF00380 Ribosomal protein S9/S16 A8A54_03490 PF00572 Ribosomal protein L13 A8A54_03500 PF13380 CoA binding domain A8A54_03505 PF01053 Cys/Met metabolism PLP-dependent enzyme A8A54_03515 PF00171 Aldehyde dehydrogenase family A8A54_03520 PF01791 DeoC/LacD family aldolase A8A54_03525 PF00294 pfkB family carbohydrate kinase A8A54_03525 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) A8A54_03535 PF02653 Branched-chain amino acid transport system / permease component A8A54_03540 PF02653 Branched-chain amino acid transport system / permease component A8A54_03545 PF00005 ABC transporter A8A54_03550 PF13407 Periplasmic binding protein domain A8A54_03555 PF00455 DeoR C terminal sensor domain A8A54_03555 PF08220 DeoR-like helix-turn-helix domain A8A54_03580 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 A8A54_03585 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit A8A54_03590 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit A8A54_03595 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit A8A54_03605 PF10531 SLBB domain A8A54_03605 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit A8A54_03605 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region A8A54_03610 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region A8A54_03610 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal A8A54_03610 PF00384 Molybdopterin oxidoreductase A8A54_03615 PF00146 NADH dehydrogenase A8A54_03620 PF12838 4Fe-4S dicluster domain A8A54_03625 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 A8A54_03630 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L A8A54_03635 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus A8A54_03635 PF00361 Proton-conducting membrane transporter A8A54_03640 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus A8A54_03640 PF00361 Proton-conducting membrane transporter A8A54_03645 PF00361 Proton-conducting membrane transporter A8A54_03650 PF02237 Biotin protein ligase C terminal domain A8A54_03650 PF03099 Biotin/lipoate A/B protein ligase family A8A54_03655 PF17770 Ribonuclease J C-terminal domain A8A54_03655 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain A8A54_03655 PF12706 Beta-lactamase superfamily domain A8A54_03675 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) A8A54_03675 PF03129 Anticodon binding domain A8A54_03680 PF12704 MacB-like periplasmic core domain A8A54_03680 PF02687 FtsX-like permease family A8A54_03685 PF00005 ABC transporter A8A54_03695 PF02811 PHP domain A8A54_03695 PF14579 Helix-hairpin-helix motif A8A54_03695 PF17657 Bacterial DNA polymerase III alpha subunit finger domain A8A54_03695 PF07733 Bacterial DNA polymerase III alpha NTPase domain A8A54_03705 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family A8A54_03710 PF01638 HxlR-like helix-turn-helix A8A54_03730 PF00163 Ribosomal protein S4/S9 N-terminal domain A8A54_03730 PF01479 S4 domain A8A54_03735 PF01171 PP-loop family A8A54_03740 PF00459 Inositol monophosphatase family A8A54_03745 PF07690 Major Facilitator Superfamily A8A54_03750 PF00462 Glutaredoxin A8A54_03760 PF00586 AIR synthase related protein, N-terminal domain A8A54_03760 PF02769 AIR synthase related protein, C-terminal domain A8A54_03760 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain A8A54_03765 PF00392 Bacterial regulatory proteins, gntR family A8A54_03765 PF00155 Aminotransferase class I and II A8A54_03780 PF13417 Glutathione S-transferase, N-terminal domain A8A54_03790 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase A8A54_03795 PF01259 SAICAR synthetase A8A54_03805 PF03328 HpcH/HpaI aldolase/citrate lyase family A8A54_03815 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily A8A54_03825 PF00206 Lyase A8A54_03825 PF10397 Adenylosuccinate lyase C-terminus A8A54_03830 PF00834 Ribulose-phosphate 3 epimerase family A8A54_03840 PF00107 Zinc-binding dehydrogenase A8A54_03840 PF08240 Alcohol dehydrogenase GroES-like domain A8A54_03845 PF02801 Beta-ketoacyl synthase, C-terminal domain A8A54_03845 PF00109 Beta-ketoacyl synthase, N-terminal domain A8A54_03850 PF02801 Beta-ketoacyl synthase, C-terminal domain A8A54_03850 PF00109 Beta-ketoacyl synthase, N-terminal domain A8A54_03855 PF00550 Phosphopantetheine attachment site A8A54_03870 PF00294 pfkB family carbohydrate kinase A8A54_03875 PF06299 Protein of unknown function (DUF1045) A8A54_03880 PF07969 Amidohydrolase family A8A54_03885 PF13419 Haloacid dehalogenase-like hydrolase A8A54_03890 PF01207 Dihydrouridine synthase (Dus) A8A54_03900 PF02654 Cobalamin-5-phosphate synthase A8A54_03905 PF02277 Phosphoribosyltransferase A8A54_03910 PF01037 Lrp/AsnC ligand binding domain A8A54_03910 PF13404 AsnC-type helix-turn-helix domain A8A54_03925 PF08238 Sel1 repeat A8A54_03940 PF01521 Iron-sulphur cluster biosynthesis A8A54_03945 PF01966 HD domain A8A54_03945 PF13286 Phosphohydrolase-associated domain A8A54_03950 PF00750 tRNA synthetases class I (R) A8A54_03950 PF05746 DALR anticodon binding domain A8A54_03950 PF03485 Arginyl tRNA synthetase N terminal domain A8A54_03960 PF00933 Glycosyl hydrolase family 3 N terminal domain A8A54_03965 PF02616 Segregation and condensation protein ScpA A8A54_03970 PF04079 Segregation and condensation complex subunit ScpB A8A54_03975 PF02416 mttA/Hcf106 family A8A54_03980 PF02416 mttA/Hcf106 family A8A54_03985 PF00902 Sec-independent protein translocase protein (TatC) A8A54_03990 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) A8A54_03990 PF02403 Seryl-tRNA synthetase N-terminal domain A8A54_03995 PF01975 Survival protein SurE A8A54_04005 PF01551 Peptidase family M23 A8A54_04005 PF01476 LysM domain A8A54_04015 PF02699 Preprotein translocase subunit A8A54_04020 PF02355 Protein export membrane protein A8A54_04020 PF07549 SecD/SecF GG Motif A8A54_04035 PF01134 Glucose inhibited division protein A A8A54_04060 PF05697 Bacterial trigger factor protein (TF) A8A54_04060 PF05698 Bacterial trigger factor protein (TF) C-terminus A8A54_04060 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase A8A54_04070 PF02637 GatB domain A8A54_04070 PF02934 GatB/GatE catalytic domain A8A54_04085 PF09923 Uncharacterized protein conserved in bacteria (DUF2155) A8A54_04090 PF03588 Leucyl/phenylalanyl-tRNA protein transferase A8A54_04095 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain A8A54_04095 PF02785 Biotin carboxylase C-terminal domain A8A54_04095 PF00289 Biotin carboxylase, N-terminal domain A8A54_04100 PF00364 Biotin-requiring enzyme A8A54_04105 PF01220 Dehydroquinase class II A8A54_04115 PF01435 Peptidase family M48 A8A54_04120 PF00155 Aminotransferase class I and II A8A54_04125 PF12111 Polyribonucleotide phosphorylase C terminal A8A54_04125 PF10150 Ribonuclease E/G family A8A54_04125 PF00575 S1 RNA binding domain A8A54_04135 PF11741 AMIN domain A8A54_04135 PF01520 N-acetylmuramoyl-L-alanine amidase A8A54_04140 PF00912 Transglycosylase A8A54_04140 PF00905 Penicillin binding protein transpeptidase domain A8A54_04140 PF17092 Penicillin-binding protein OB-like domain A8A54_04145 PF00472 RF-1 domain A8A54_04145 PF03462 PCRF domain A8A54_04155 PF00578 AhpC/TSA family A8A54_04165 PF00579 tRNA synthetases class I (W and Y) A8A54_04170 PF03702 Anhydro-N-acetylmuramic acid kinase A8A54_04175 PF02129 X-Pro dipeptidyl-peptidase (S15 family) A8A54_04185 PF01458 Uncharacterized protein family (UPF0051) A8A54_04190 PF00005 ABC transporter A8A54_04195 PF01458 Uncharacterized protein family (UPF0051) A8A54_04200 PF00266 Aminotransferase class-V A8A54_04205 PF01883 Iron-sulfur cluster assembly protein A8A54_04220 PF01513 ATP-NAD kinase A8A54_04225 PF00270 DEAD/DEAH box helicase A8A54_04225 PF00271 Helicase conserved C-terminal domain A8A54_04235 PF01521 Iron-sulphur cluster biosynthesis A8A54_04255 PF02321 Outer membrane efflux protein A8A54_04265 PF00133 tRNA synthetases class I (I, L, M and V) A8A54_04265 PF08264 Anticodon-binding domain of tRNA A8A54_04265 PF10458 Valyl tRNA synthetase tRNA binding arm A8A54_04275 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase A8A54_04275 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase A8A54_04280 PF00043 Glutathione S-transferase, C-terminal domain A8A54_04280 PF13417 Glutathione S-transferase, N-terminal domain A8A54_04285 PF00528 Binding-protein-dependent transport system inner membrane component A8A54_04290 PF00528 Binding-protein-dependent transport system inner membrane component A8A54_04295 PF00497 Bacterial extracellular solute-binding proteins, family 3 A8A54_04305 PF12804 MobA-like NTP transferase domain A8A54_04315 PF06463 Molybdenum Cofactor Synthesis C A8A54_04315 PF04055 Radical SAM superfamily A8A54_04325 PF05683 Fumarase C-terminus A8A54_04325 PF05681 Fumarate hydratase (Fumerase) A8A54_04330 PF01471 Putative peptidoglycan binding domain A8A54_04330 PF03734 L,D-transpeptidase catalytic domain A8A54_04340 PF03099 Biotin/lipoate A/B protein ligase family A8A54_04345 PF00005 ABC transporter A8A54_04345 PF12848 ABC transporter A8A54_04350 PF00106 short chain dehydrogenase A8A54_04355 PF03180 NLPA lipoprotein A8A54_04390 PF17841 BID domain of Bartonella effector protein (Bep) A8A54_04390 PF01443 Viral (Superfamily 1) RNA helicase A8A54_04390 PF03389 MobA/MobL family A8A54_04485 PF00145 C-5 cytosine-specific DNA methylase A8A54_04540 PF01145 SPFH domain / Band 7 family A8A54_04555 PF07681 DoxX A8A54_04570 PF00781 Diacylglycerol kinase catalytic domain A8A54_04575 PF03330 Lytic transglycolase A8A54_04575 PF05036 Sporulation related domain A8A54_04580 PF00768 D-alanyl-D-alanine carboxypeptidase A8A54_04580 PF07943 Penicillin-binding protein 5, C-terminal domain A8A54_04585 PF02223 Thymidylate kinase A8A54_04590 PF09115 DNA polymerase III, delta subunit, C terminal A8A54_04595 PF08264 Anticodon-binding domain of tRNA A8A54_04595 PF09334 tRNA synthetases class I (M) A8A54_04600 PF01026 TatD related DNase A8A54_04605 PF12706 Beta-lactamase superfamily domain A8A54_04605 PF03099 Biotin/lipoate A/B protein ligase family A8A54_04610 PF00005 ABC transporter A8A54_04610 PF00664 ABC transporter transmembrane region A8A54_04615 PF00849 RNA pseudouridylate synthase A8A54_04615 PF01479 S4 domain A8A54_04620 PF00892 EamA-like transporter family A8A54_04625 PF13419 Haloacid dehalogenase-like hydrolase A8A54_04635 PF00120 Glutamine synthetase, catalytic domain A8A54_04635 PF03951 Glutamine synthetase, beta-Grasp domain A8A54_04640 PF00543 Nitrogen regulatory protein P-II A8A54_04645 PF03853 YjeF-related protein N-terminus A8A54_04645 PF01256 Carbohydrate kinase A8A54_04650 PF13419 Haloacid dehalogenase-like hydrolase A8A54_04655 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) A8A54_04665 PF07992 Pyridine nucleotide-disulphide oxidoreductase A8A54_04665 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain A8A54_04670 PF01474 Class-II DAHP synthetase family A8A54_04680 PF00795 Carbon-nitrogen hydrolase A8A54_04680 PF02540 NAD synthase A8A54_04685 PF00749 tRNA synthetases class I (E and Q), catalytic domain A8A54_04690 PF00390 Malic enzyme, N-terminal domain A8A54_04690 PF03949 Malic enzyme, NAD binding domain A8A54_04690 PF01515 Phosphate acetyl/butaryl transferase A8A54_04695 PF00285 Citrate synthase, C-terminal domain A8A54_04705 PF00534 Glycosyl transferases group 1 A8A54_04710 PF13378 Enolase C-terminal domain-like A8A54_04710 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain A8A54_04715 PF02405 Permease MlaE A8A54_04720 PF00005 ABC transporter A8A54_04740 PF00111 2Fe-2S iron-sulfur cluster binding domain A8A54_04745 PF07992 Pyridine nucleotide-disulphide oxidoreductase A8A54_04745 PF07992 Pyridine nucleotide-disulphide oxidoreductase A8A54_04755 PF00809 Pterin binding enzyme A8A54_04760 PF02152 Dihydroneopterin aldolase A8A54_04765 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) A8A54_04775 PF05128 Domain of unknown function (DUF697) A8A54_04780 PF04317 YcjX-like family, DUF463 A8A54_04790 PF01258 Prokaryotic dksA/traR C4-type zinc finger A8A54_04800 PF00512 His Kinase A (phospho-acceptor) domain A8A54_04800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A8A54_04800 PF08448 PAS fold A8A54_04800 PF00072 Response regulator receiver domain A8A54_04800 PF13188 PAS domain A8A54_04815 PF00924 Mechanosensitive ion channel A8A54_04825 PF02867 Ribonucleotide reductase, barrel domain A8A54_04825 PF08471 Class II vitamin B12-dependent ribonucleotide reductase A8A54_04835 PF00156 Phosphoribosyl transferase domain A8A54_04845 PF00994 Probable molybdopterin binding domain A8A54_04845 PF02464 Competence-damaged protein A8A54_04855 PF00291 Pyridoxal-phosphate dependent enzyme A8A54_04855 PF00585 C-terminal regulatory domain of Threonine dehydratase A8A54_04860 PF00270 DEAD/DEAH box helicase A8A54_04860 PF00271 Helicase conserved C-terminal domain A8A54_04865 PF00291 Pyridoxal-phosphate dependent enzyme A8A54_04870 PF02272 DHHA1 domain A8A54_04870 PF01411 tRNA synthetases class II (A) A8A54_04870 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain A8A54_04875 PF00581 Rhodanese-like domain A8A54_04885 PF00990 Diguanylate cyclase, GGDEF domain A8A54_04885 PF17151 Periplasmic sensor domain A8A54_04890 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain A8A54_04890 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain A8A54_04905 PF13593 SBF-like CPA transporter family (DUF4137) A8A54_04910 PF16363 GDP-mannose 4,6 dehydratase A8A54_04915 PF03819 MazG nucleotide pyrophosphohydrolase domain A8A54_04935 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) A8A54_04935 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain A8A54_04935 PF03129 Anticodon binding domain A8A54_04940 PF07943 Penicillin-binding protein 5, C-terminal domain A8A54_04940 PF00768 D-alanyl-D-alanine carboxypeptidase A8A54_04955 PF01227 GTP cyclohydrolase I A8A54_04960 PF01502 Phosphoribosyl-AMP cyclohydrolase A8A54_04965 PF01734 Patatin-like phospholipase A8A54_04980 PF03459 TOBE domain A8A54_04985 PF02515 CoA-transferase family III A8A54_04990 PF02770 Acyl-CoA dehydrogenase, middle domain A8A54_04990 PF00441 Acyl-CoA dehydrogenase, C-terminal domain A8A54_04990 PF02771 Acyl-CoA dehydrogenase, N-terminal domain A8A54_04995 PF03466 LysR substrate binding domain A8A54_04995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A8A54_05000 PF00296 Luciferase-like monooxygenase A8A54_05005 PF00873 AcrB/AcrD/AcrF family A8A54_05010 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion A8A54_05020 PF01702 Queuine tRNA-ribosyltransferase A8A54_05025 PF02547 Queuosine biosynthesis protein A8A54_05030 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD A8A54_05035 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD A8A54_05040 PF01467 Cytidylyltransferase-like A8A54_05045 PF00521 DNA gyrase/topoisomerase IV, subunit A A8A54_05045 PF03989 DNA gyrase C-terminal domain, beta-propeller A8A54_05050 PF01914 MarC family integral membrane protein A8A54_05055 PF00528 Binding-protein-dependent transport system inner membrane component A8A54_05060 PF00528 Binding-protein-dependent transport system inner membrane component A8A54_05070 PF00005 ABC transporter A8A54_05080 PF07969 Amidohydrolase family A8A54_05090 PF00005 ABC transporter A8A54_05095 PF00005 ABC transporter A8A54_05100 PF06007 Phosphonate metabolism protein PhnJ A8A54_05105 PF05861 Bacterial phosphonate metabolism protein (PhnI) A8A54_05115 PF06754 Phosphonate metabolism protein PhnG A8A54_05120 PF00392 Bacterial regulatory proteins, gntR family A8A54_05120 PF07702 UTRA domain A8A54_05125 PF03960 ArsC family A8A54_05130 PF00436 Single-strand binding protein family A8A54_05135 PF17760 UvrA interaction domain A8A54_05135 PF17755 UvrA DNA-binding domain A8A54_05140 PF09992 Phosphodiester glycosidase A8A54_05145 PF00216 Bacterial DNA-binding protein A8A54_05150 PF00004 ATPase family associated with various cellular activities (AAA) A8A54_05150 PF02190 ATP-dependent protease La (LON) substrate-binding domain A8A54_05150 PF05362 Lon protease (S16) C-terminal proteolytic domain A8A54_05155 PF06689 ClpX C4-type zinc finger A8A54_05155 PF10431 C-terminal, D2-small domain, of ClpB protein A8A54_05155 PF07724 AAA domain (Cdc48 subfamily) A8A54_05160 PF00574 Clp protease A8A54_05165 PF01926 50S ribosome-binding GTPase A8A54_05165 PF13167 GTP-binding GTPase N-terminal A8A54_05165 PF16360 GTP-binding GTPase Middle Region A8A54_05170 PF17209 Hfq protein A8A54_05180 PF02080 TrkA-C domain A8A54_05180 PF02254 TrkA-N domain A8A54_05185 PF00072 Response regulator receiver domain A8A54_05185 PF00158 Sigma-54 interaction domain A8A54_05185 PF02954 Bacterial regulatory protein, Fis family A8A54_05190 PF00512 His Kinase A (phospho-acceptor) domain A8A54_05190 PF00672 HAMP domain A8A54_05190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A8A54_05190 PF00989 PAS fold A8A54_05195 PF02954 Bacterial regulatory protein, Fis family A8A54_05195 PF00158 Sigma-54 interaction domain A8A54_05195 PF00072 Response regulator receiver domain A8A54_05200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A8A54_05200 PF00512 His Kinase A (phospho-acceptor) domain A8A54_05200 PF00989 PAS fold A8A54_05205 PF01207 Dihydrouridine synthase (Dus) A8A54_05210 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase A8A54_05210 PF02542 YgbB family A8A54_05215 PF02464 Competence-damaged protein A8A54_05215 PF18146 Damage-inducible protein CinA KH domain A8A54_05215 PF00994 Probable molybdopterin binding domain A8A54_05220 PF03364 Polyketide cyclase / dehydrase and lipid transport A8A54_05225 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family A8A54_05225 PF04055 Radical SAM superfamily A8A54_05235 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain A8A54_05235 PF07992 Pyridine nucleotide-disulphide oxidoreductase A8A54_05245 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) A8A54_05245 PF00364 Biotin-requiring enzyme A8A54_05245 PF02817 e3 binding domain A8A54_05250 PF00364 Biotin-requiring enzyme A8A54_05250 PF02780 Transketolase, C-terminal domain A8A54_05250 PF02779 Transketolase, pyrimidine binding domain A8A54_05255 PF00676 Dehydrogenase E1 component A8A54_05260 PF04977 Septum formation initiator A8A54_05265 PF07237 Protein of unknown function (DUF1428) A8A54_05275 PF03952 Enolase, N-terminal domain A8A54_05275 PF00113 Enolase, C-terminal TIM barrel domain A8A54_05280 PF00793 DAHP synthetase I family A8A54_05290 PF06418 CTP synthase N-terminus A8A54_05290 PF00117 Glutamine amidotransferase class-I A8A54_05300 PF03840 Preprotein translocase SecG subunit A8A54_05305 PF00121 Triosephosphate isomerase A8A54_05315 PF02885 Glycosyl transferase family, helical bundle domain A8A54_05315 PF00591 Glycosyl transferase family, a/b domain A8A54_05320 PF00218 Indole-3-glycerol phosphate synthase A8A54_05325 PF01967 MoaC family A8A54_05330 PF03454 MoeA C-terminal region (domain IV) A8A54_05330 PF00994 Probable molybdopterin binding domain A8A54_05330 PF03453 MoeA N-terminal region (domain I and II) A8A54_05335 PF01726 LexA DNA binding domain A8A54_05335 PF00717 Peptidase S24-like A8A54_05345 PF00749 tRNA synthetases class I (E and Q), catalytic domain A8A54_05350 PF00285 Citrate synthase, C-terminal domain A8A54_05355 PF02684 Lipid-A-disaccharide synthetase A8A54_05365 PF00132 Bacterial transferase hexapeptide (six repeats) A8A54_05365 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 A8A54_05370 PF07977 FabA-like domain A8A54_05375 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD A8A54_05375 PF00132 Bacterial transferase hexapeptide (six repeats) A8A54_05380 PF01103 Surface antigen A8A54_05380 PF07244 Surface antigen variable number repeat A8A54_05385 PF02163 Peptidase family M50 A8A54_05385 PF17820 PDZ domain A8A54_05395 PF01255 Putative undecaprenyl diphosphate synthase A8A54_05400 PF01765 Ribosome recycling factor A8A54_05405 PF00696 Amino acid kinase family A8A54_05410 PF00889 Elongation factor TS A8A54_05415 PF00318 Ribosomal protein S2 A8A54_05430 PF03009 Glycerophosphoryl diester phosphodiesterase family A8A54_05440 PF01230 HIT domain A8A54_05455 PF00004 ATPase family associated with various cellular activities (AAA) A8A54_05455 PF07724 AAA domain (Cdc48 subfamily) A8A54_05455 PF17871 AAA lid domain A8A54_05455 PF02861 Clp amino terminal domain, pathogenicity island component A8A54_05455 PF10431 C-terminal, D2-small domain, of ClpB protein A8A54_05460 PF02617 ATP-dependent Clp protease adaptor protein ClpS A8A54_05465 PF00768 D-alanyl-D-alanine carboxypeptidase A8A54_05465 PF07943 Penicillin-binding protein 5, C-terminal domain A8A54_05480 PF03315 Serine dehydratase beta chain A8A54_05480 PF03313 Serine dehydratase alpha chain A8A54_05495 PF00376 MerR family regulatory protein A8A54_05495 PF09278 MerR, DNA binding A8A54_05515 PF14489 QueF-like protein A8A54_05525 PF01381 Helix-turn-helix A8A54_05525 PF09856 Predicted transcriptional regulator (DUF2083) A8A54_05525 PF06114 IrrE N-terminal-like domain A8A54_05530 PF01039 Carboxyl transferase domain A8A54_05535 PF00289 Biotin carboxylase, N-terminal domain A8A54_05535 PF02785 Biotin carboxylase C-terminal domain A8A54_05535 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain A8A54_05560 PF00248 Aldo/keto reductase family A8A54_05565 PF01177 Asp/Glu/Hydantoin racemase A8A54_05570 PF00588 SpoU rRNA Methylase family A8A54_05575 PF01965 DJ-1/PfpI family A8A54_05585 PF00180 Isocitrate/isopropylmalate dehydrogenase A8A54_05615 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain A8A54_05615 PF01411 tRNA synthetases class II (A) A8A54_05615 PF02272 DHHA1 domain A8A54_05620 PF00154 recA bacterial DNA recombination protein A8A54_05625 PF00691 OmpA family A8A54_05625 PF13488 Glycine zipper A8A54_05640 PF12002 MgsA AAA+ ATPase C terminal A8A54_05640 PF16193 AAA C-terminal domain A8A54_05640 PF00004 ATPase family associated with various cellular activities (AAA) A8A54_05645 PF17820 PDZ domain A8A54_05645 PF13180 PDZ domain A8A54_05650 PF01196 Ribosomal protein L17 A8A54_05655 PF01000 RNA polymerase Rpb3/RpoA insert domain A8A54_05655 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain A8A54_05655 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain A8A54_05660 PF00411 Ribosomal protein S11 A8A54_05665 PF00416 Ribosomal protein S13/S18 A8A54_05675 PF00344 SecY translocase A8A54_05680 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A A8A54_05685 PF00327 Ribosomal protein L30p/L7e A8A54_05690 PF03719 Ribosomal protein S5, C-terminal domain A8A54_05690 PF00333 Ribosomal protein S5, N-terminal domain A8A54_05695 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast A8A54_05700 PF00347 Ribosomal protein L6 A8A54_05705 PF00410 Ribosomal protein S8 A8A54_05710 PF00253 Ribosomal protein S14p/S29e A8A54_05715 PF00281 Ribosomal protein L5 A8A54_05715 PF00673 ribosomal L5P family C-terminus A8A54_05720 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 A8A54_05720 PF00467 KOW motif A8A54_05725 PF00238 Ribosomal protein L14p/L23e A8A54_05730 PF00366 Ribosomal protein S17 A8A54_05735 PF00831 Ribosomal L29 protein A8A54_05740 PF00252 Ribosomal protein L16p/L10e A8A54_05745 PF07650 KH domain A8A54_05745 PF00189 Ribosomal protein S3, C-terminal domain A8A54_05750 PF00237 Ribosomal protein L22p/L17e A8A54_05755 PF00203 Ribosomal protein S19 A8A54_05760 PF03947 Ribosomal Proteins L2, C-terminal domain A8A54_05760 PF00181 Ribosomal Proteins L2, RNA binding domain A8A54_05765 PF00276 Ribosomal protein L23 A8A54_05770 PF00573 Ribosomal protein L4/L1 family A8A54_05775 PF00297 Ribosomal protein L3 A8A54_05780 PF00338 Ribosomal protein S10p/S20e A8A54_05785 PF00009 Elongation factor Tu GTP binding domain A8A54_05785 PF03143 Elongation factor Tu C-terminal domain A8A54_05785 PF03144 Elongation factor Tu domain 2 A8A54_05790 PF03764 Elongation factor G, domain IV A8A54_05790 PF00009 Elongation factor Tu GTP binding domain A8A54_05790 PF03144 Elongation factor Tu domain 2 A8A54_05790 PF00679 Elongation factor G C-terminus A8A54_05790 PF14492 Elongation Factor G, domain II A8A54_05795 PF00177 Ribosomal protein S7p/S5e A8A54_05800 PF00164 Ribosomal protein S12/S23 A8A54_05810 PF05000 RNA polymerase Rpb1, domain 4 A8A54_05810 PF04997 RNA polymerase Rpb1, domain 1 A8A54_05810 PF00623 RNA polymerase Rpb1, domain 2 A8A54_05810 PF04983 RNA polymerase Rpb1, domain 3 A8A54_05810 PF04998 RNA polymerase Rpb1, domain 5 A8A54_05815 PF00562 RNA polymerase Rpb2, domain 6 A8A54_05815 PF04563 RNA polymerase beta subunit A8A54_05815 PF04560 RNA polymerase Rpb2, domain 7 A8A54_05815 PF04561 RNA polymerase Rpb2, domain 2 A8A54_05815 PF04565 RNA polymerase Rpb2, domain 3 A8A54_05815 PF10385 RNA polymerase beta subunit external 1 domain A8A54_05820 PF16320 Ribosomal protein L7/L12 dimerisation domain A8A54_05820 PF00542 Ribosomal protein L7/L12 C-terminal domain A8A54_05825 PF00466 Ribosomal protein L10 A8A54_05830 PF00687 Ribosomal protein L1p/L10e family A8A54_05835 PF00298 Ribosomal protein L11, RNA binding domain A8A54_05835 PF03946 Ribosomal protein L11, N-terminal domain A8A54_05840 PF00467 KOW motif A8A54_05840 PF02357 Transcription termination factor nusG A8A54_05855 PF00009 Elongation factor Tu GTP binding domain A8A54_05855 PF03144 Elongation factor Tu domain 2 A8A54_05855 PF03143 Elongation factor Tu C-terminal domain A8A54_05870 PF00588 SpoU rRNA Methylase family A8A54_05870 PF08032 RNA 2'-O ribose methyltransferase substrate binding A8A54_05875 PF00478 IMP dehydrogenase / GMP reductase domain A8A54_05875 PF00571 CBS domain A8A54_05895 PF00132 Bacterial transferase hexapeptide (six repeats) A8A54_05915 PF06426 Serine acetyltransferase, N-terminal A8A54_05915 PF00132 Bacterial transferase hexapeptide (six repeats) A8A54_05920 PF00561 alpha/beta hydrolase fold A8A54_05930 PF00313 'Cold-shock' DNA-binding domain A8A54_05935 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily A8A54_05945 PF17768 RecJ OB domain A8A54_05945 PF02272 DHHA1 domain A8A54_05945 PF01368 DHH family A8A54_05950 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded A8A54_05955 PF00005 ABC transporter A8A54_05955 PF16326 ABC transporter C-terminal domain A8A54_05955 PF12848 ABC transporter A8A54_05960 PF01842 ACT domain A8A54_05960 PF00742 Homoserine dehydrogenase A8A54_05960 PF03447 Homoserine dehydrogenase, NAD binding domain A8A54_05965 PF00155 Aminotransferase class I and II A8A54_05995 PF17746 SfsA N-terminal OB domain A8A54_05995 PF03749 Sugar fermentation stimulation protein RE domain A8A54_06000 PF00557 Metallopeptidase family M24 A8A54_06005 PF04002 RadC-like JAB domain A8A54_06015 PF01244 Membrane dipeptidase (Peptidase family M19) A8A54_06020 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle A8A54_06025 PF00528 Binding-protein-dependent transport system inner membrane component A8A54_06035 PF00005 ABC transporter A8A54_06035 PF08352 Oligopeptide/dipeptide transporter, C-terminal region A8A54_06040 PF08352 Oligopeptide/dipeptide transporter, C-terminal region A8A54_06040 PF00005 ABC transporter A8A54_06045 PF04954 Siderophore-interacting protein A8A54_06045 PF08021 Siderophore-interacting FAD-binding domain A8A54_06050 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases A8A54_06060 PF02570 Precorrin-8X methylmutase A8A54_06065 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases A8A54_06070 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases A8A54_06085 PF01613 Flavin reductase like domain A8A54_06095 PF03186 CobD/Cbib protein A8A54_06100 PF00155 Aminotransferase class I and II A8A54_06105 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain A8A54_06105 PF07685 CobB/CobQ-like glutamine amidotransferase domain A8A54_06110 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases A8A54_06115 PF01888 CbiD A8A54_06120 PF02571 Precorrin-6x reductase CbiJ/CobK A8A54_06125 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases A8A54_06130 PF00440 Bacterial regulatory proteins, tetR family A8A54_06135 PF07690 Major Facilitator Superfamily A8A54_06150 PF01925 Sulfite exporter TauE/SafE A8A54_06155 PF00892 EamA-like transporter family A8A54_06160 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP A8A54_06165 PF02514 CobN/Magnesium Chelatase A8A54_06170 PF07683 Cobalamin synthesis protein cobW C-terminal domain A8A54_06170 PF02492 CobW/HypB/UreG, nucleotide-binding domain A8A54_06175 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase A8A54_06190 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain A8A54_06190 PF07685 CobB/CobQ-like glutamine amidotransferase domain A8A54_06195 PF02771 Acyl-CoA dehydrogenase, N-terminal domain A8A54_06195 PF02770 Acyl-CoA dehydrogenase, middle domain A8A54_06195 PF00441 Acyl-CoA dehydrogenase, C-terminal domain A8A54_06200 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase A8A54_06200 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase A8A54_06205 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase A8A54_06215 PF03466 LysR substrate binding domain A8A54_06215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A8A54_06225 PF01965 DJ-1/PfpI family A8A54_06225 PF12833 Helix-turn-helix domain A8A54_06230 PF01571 Aminomethyltransferase folate-binding domain A8A54_06230 PF08669 Glycine cleavage T-protein C-terminal barrel domain A8A54_06240 PF12795 Mechanosensitive ion channel porin domain A8A54_06240 PF00924 Mechanosensitive ion channel A8A54_06240 PF12794 Mechanosensitive ion channel inner membrane domain 1 A8A54_06250 PF02355 Protein export membrane protein A8A54_06250 PF07549 SecD/SecF GG Motif A8A54_06255 PF00999 Sodium/hydrogen exchanger family A8A54_06255 PF02254 TrkA-N domain A8A54_06270 PF00528 Binding-protein-dependent transport system inner membrane component A8A54_06275 PF00528 Binding-protein-dependent transport system inner membrane component A8A54_06290 PF03741 Integral membrane protein TerC family A8A54_06290 PF03471 Transporter associated domain A8A54_06295 PF09335 SNARE associated Golgi protein A8A54_06315 PF05025 RbsD / FucU transport protein family A8A54_06330 PF00005 ABC transporter A8A54_06335 PF02653 Branched-chain amino acid transport system / permease component A8A54_06345 PF02894 Oxidoreductase family, C-terminal alpha/beta domain A8A54_06345 PF01408 Oxidoreductase family, NAD-binding Rossmann fold A8A54_06350 PF00005 ABC transporter A8A54_06355 PF01032 FecCD transport family A8A54_06365 PF07715 TonB-dependent Receptor Plug Domain A8A54_06365 PF00593 TonB dependent receptor A8A54_06375 PF00005 ABC transporter A8A54_06380 PF13533 Biotin-lipoyl like A8A54_06390 PF00582 Universal stress protein family A8A54_06400 PF02567 Phenazine biosynthesis-like protein A8A54_06415 PF07886 BA14K-like protein A8A54_06420 PF00155 Aminotransferase class I and II A8A54_06425 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain A8A54_06425 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain A8A54_06430 PF00440 Bacterial regulatory proteins, tetR family A8A54_06435 PF02705 K+ potassium transporter A8A54_06440 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ A8A54_06450 PF14490 Helix-hairpin-helix containing domain A8A54_06450 PF13538 UvrD-like helicase C-terminal domain A8A54_06450 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain A8A54_06460 PF02600 Disulfide bond formation protein DsbB A8A54_06465 PF00291 Pyridoxal-phosphate dependent enzyme A8A54_06470 PF01810 LysE type translocator A8A54_06475 PF10369 Small subunit of acetolactate synthase A8A54_06475 PF01842 ACT domain A8A54_06480 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain A8A54_06480 PF00205 Thiamine pyrophosphate enzyme, central domain A8A54_06480 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain A8A54_06495 PF13302 Acetyltransferase (GNAT) domain A8A54_06500 PF13180 PDZ domain A8A54_06510 PF01145 SPFH domain / Band 7 family A8A54_06515 PF01145 SPFH domain / Band 7 family A8A54_06520 PF00186 Dihydrofolate reductase A8A54_06525 PF00303 Thymidylate synthase A8A54_06540 PF07690 Major Facilitator Superfamily A8A54_06575 PF01565 FAD binding domain A8A54_06575 PF02913 FAD linked oxidases, C-terminal domain A8A54_06580 PF03928 Haem-degrading A8A54_06590 PF00580 UvrD/REP helicase N-terminal domain A8A54_06590 PF13361 UvrD-like helicase C-terminal domain A8A54_06600 PF00132 Bacterial transferase hexapeptide (six repeats) A8A54_06605 PF02630 SCO1/SenC A8A54_06615 PF01321 Creatinase/Prolidase N-terminal domain A8A54_06615 PF00557 Metallopeptidase family M24 A8A54_06635 PF00533 BRCA1 C Terminus (BRCT) domain A8A54_06635 PF03119 NAD-dependent DNA ligase C4 zinc finger domain A8A54_06635 PF03120 NAD-dependent DNA ligase OB-fold domain A8A54_06635 PF01653 NAD-dependent DNA ligase adenylation domain A8A54_06635 PF12826 Helix-hairpin-helix motif A8A54_06640 PF02463 RecF/RecN/SMC N terminal domain A8A54_06645 PF13525 Outer membrane lipoprotein A8A54_06650 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase A8A54_06655 PF00091 Tubulin/FtsZ family, GTPase domain A8A54_06655 PF12327 FtsZ family, C-terminal domain A8A54_06660 PF02491 SHS2 domain inserted in FTSA A8A54_06665 PF08478 POTRA domain, FtsQ-type A8A54_06665 PF03799 Cell division protein FtsQ A8A54_06670 PF01820 D-ala D-ala ligase N-terminus A8A54_06670 PF07478 D-ala D-ala ligase C-terminus A8A54_06675 PF01565 FAD binding domain A8A54_06675 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain A8A54_06680 PF02875 Mur ligase family, glutamate ligase domain A8A54_06680 PF08245 Mur ligase middle domain A8A54_06680 PF01225 Mur ligase family, catalytic domain A8A54_06685 PF04101 Glycosyltransferase family 28 C-terminal domain A8A54_06685 PF03033 Glycosyltransferase family 28 N-terminal domain A8A54_06690 PF01098 Cell cycle protein A8A54_06695 PF02875 Mur ligase family, glutamate ligase domain A8A54_06695 PF08245 Mur ligase middle domain A8A54_06700 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 A8A54_06700 PF00953 Glycosyl transferase family 4 A8A54_06705 PF01225 Mur ligase family, catalytic domain A8A54_06705 PF08245 Mur ligase middle domain A8A54_06705 PF02875 Mur ligase family, glutamate ligase domain A8A54_06710 PF08245 Mur ligase middle domain A8A54_06710 PF02875 Mur ligase family, glutamate ligase domain A8A54_06710 PF01225 Mur ligase family, catalytic domain A8A54_06715 PF03717 Penicillin-binding Protein dimerisation domain A8A54_06715 PF00905 Penicillin binding protein transpeptidase domain A8A54_06725 PF01795 MraW methylase family A8A54_06730 PF01566 Natural resistance-associated macrophage protein A8A54_06750 PF01510 N-acetylmuramoyl-L-alanine amidase A8A54_06755 PF05099 Tellurite resistance protein TerB A8A54_06755 PF00226 DnaJ domain A8A54_06775 PF13649 Methyltransferase domain A8A54_06780 PF01183 Glycosyl hydrolases family 25 A8A54_06795 PF02219 Methylenetetrahydrofolate reductase A8A54_06800 PF01209 ubiE/COQ5 methyltransferase family A8A54_06810 PF00083 Sugar (and other) transporter A8A54_06815 PF13847 Methyltransferase domain A8A54_06820 PF00005 ABC transporter A8A54_06820 PF12848 ABC transporter A8A54_06825 PF12146 Serine aminopeptidase, S33 A8A54_06830 PF00535 Glycosyl transferase family 2 A8A54_06840 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain A8A54_06840 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain A8A54_06840 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain A8A54_06850 PF00848 Ring hydroxylating alpha subunit (catalytic domain) A8A54_06850 PF00355 Rieske [2Fe-2S] domain A8A54_06855 PF00175 Oxidoreductase NAD-binding domain A8A54_06855 PF00111 2Fe-2S iron-sulfur cluster binding domain A8A54_06855 PF00970 Oxidoreductase FAD-binding domain A8A54_06860 PF08274 PhnA Zinc-Ribbon A8A54_06860 PF03831 PhnA domain A8A54_06865 PF00857 Isochorismatase family A8A54_06885 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family A8A54_06910 PF05532 CsbD-like A8A54_06920 PF04389 Peptidase family M28 A8A54_06930 PF04402 Protein of unknown function (DUF541) A8A54_06940 PF03692 Putative zinc- or iron-chelating domain A8A54_06955 PF04546 Sigma-70, non-essential region A8A54_06955 PF04545 Sigma-70, region 4 A8A54_06955 PF03979 Sigma-70 factor, region 1.1 A8A54_06955 PF00140 Sigma-70 factor, region 1.2 A8A54_06955 PF04542 Sigma-70 region 2 A8A54_06955 PF04539 Sigma-70 region 3 A8A54_06960 PF10410 DnaB-helicase binding domain of primase A8A54_06960 PF08278 DNA primase DnaG DnaB-binding A8A54_06960 PF08275 DNA primase catalytic core, N-terminal domain A8A54_06960 PF01807 CHC2 zinc finger A8A54_06965 PF02690 Na+/Pi-cotransporter A8A54_06975 PF00117 Glutamine amidotransferase class-I A8A54_06975 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain A8A54_06980 PF04228 Putative neutral zinc metallopeptidase A8A54_06985 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain A8A54_06985 PF02142 MGS-like domain A8A54_06985 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain A8A54_06995 PF00313 'Cold-shock' DNA-binding domain A8A54_07005 PF05368 NmrA-like family A8A54_07010 PF08361 MAATS-type transcriptional repressor, C-terminal region A8A54_07010 PF00440 Bacterial regulatory proteins, tetR family A8A54_07015 PF14497 Glutathione S-transferase, C-terminal domain A8A54_07015 PF02798 Glutathione S-transferase, N-terminal domain A8A54_07030 PF17912 MalK OB fold domain A8A54_07030 PF00005 ABC transporter A8A54_07035 PF00528 Binding-protein-dependent transport system inner membrane component A8A54_07040 PF00528 Binding-protein-dependent transport system inner membrane component A8A54_07045 PF01547 Bacterial extracellular solute-binding protein A8A54_07050 PF03466 LysR substrate binding domain A8A54_07050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A8A54_07055 PF07992 Pyridine nucleotide-disulphide oxidoreductase A8A54_07060 PF02386 Cation transport protein A8A54_07065 PF01037 Lrp/AsnC ligand binding domain A8A54_07070 PF00534 Glycosyl transferases group 1 A8A54_07075 PF03449 Transcription elongation factor, N-terminal A8A54_07075 PF01272 Transcription elongation factor, GreA/GreB, C-term A8A54_07100 PF03061 Thioesterase superfamily A8A54_07110 PF00271 Helicase conserved C-terminal domain A8A54_07110 PF12344 Ultra-violet resistance protein B A8A54_07110 PF02151 UvrB/uvrC motif A8A54_07110 PF17757 UvrB interaction domain A8A54_07110 PF04851 Type III restriction enzyme, res subunit A8A54_07115 PF00107 Zinc-binding dehydrogenase A8A54_07115 PF08240 Alcohol dehydrogenase GroES-like domain A8A54_07120 PF01638 HxlR-like helix-turn-helix A8A54_07125 PF01551 Peptidase family M23 A8A54_07125 PF10145 Phage-related minor tail protein A8A54_07125 PF01464 Transglycosylase SLT domain A8A54_07130 PF00313 'Cold-shock' DNA-binding domain A8A54_07140 PF00753 Metallo-beta-lactamase superfamily A8A54_07150 PF01063 Amino-transferase class IV A8A54_07155 PF12802 MarR family A8A54_07160 PF00072 Response regulator receiver domain A8A54_07160 PF00486 Transcriptional regulatory protein, C terminal A8A54_07165 PF00672 HAMP domain A8A54_07165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A8A54_07165 PF16527 Two-component sensor protein CpxA, periplasmic domain A8A54_07165 PF00512 His Kinase A (phospho-acceptor) domain A8A54_07170 PF02537 CrcB-like protein, Camphor Resistance (CrcB) A8A54_07175 PF01588 Putative tRNA binding domain A8A54_07190 PF01790 Prolipoprotein diacylglyceryl transferase A8A54_07215 PF14572 Phosphoribosyl synthetase-associated domain A8A54_07215 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase A8A54_07230 PF01386 Ribosomal L25p family A8A54_07230 PF14693 Ribosomal protein TL5, C-terminal domain A8A54_07235 PF01195 Peptidyl-tRNA hydrolase A8A54_07240 PF01872 RibD C-terminal domain A8A54_07245 PF01926 50S ribosome-binding GTPase A8A54_07245 PF06071 Protein of unknown function (DUF933) A8A54_07250 PF01575 MaoC like domain A8A54_07260 PF00156 Phosphoribosyl transferase domain A8A54_07265 PF02167 Cytochrome C1 family A8A54_07265 PF00033 Cytochrome b/b6/petB A8A54_07265 PF00032 Cytochrome b(C-terminal)/b6/petD A8A54_07270 PF00032 Cytochrome b(C-terminal)/b6/petD A8A54_07270 PF00033 Cytochrome b/b6/petB A8A54_07275 PF00355 Rieske [2Fe-2S] domain A8A54_07275 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal A8A54_07280 PF00005 ABC transporter A8A54_07280 PF00664 ABC transporter transmembrane region A8A54_07285 PF00005 ABC transporter A8A54_07285 PF00664 ABC transporter transmembrane region A8A54_07290 PF00588 SpoU rRNA Methylase family A8A54_07305 PF01218 Coproporphyrinogen III oxidase A8A54_07315 PF09857 Putative toxin of bacterial toxin-antitoxin pair A8A54_07330 PF13735 tRNA nucleotidyltransferase domain 2 putative A8A54_07330 PF01743 Poly A polymerase head domain A8A54_07330 PF12627 Probable RNA and SrmB- binding site of polymerase A A8A54_07335 PF00293 NUDIX domain A8A54_07345 PF17863 AAA lid domain A8A54_07345 PF07726 ATPase family associated with various cellular activities (AAA) A8A54_07370 PF13409 Glutathione S-transferase, N-terminal domain A8A54_07375 PF03922 OmpW family A8A54_07380 PF00293 NUDIX domain A8A54_07395 PF08502 LeuA allosteric (dimerisation) domain A8A54_07395 PF00682 HMGL-like A8A54_07400 PF01545 Cation efflux family A8A54_07400 PF16916 Dimerisation domain of Zinc Transporter A8A54_07405 PF00117 Glutamine amidotransferase class-I A8A54_07405 PF00425 chorismate binding enzyme A8A54_07405 PF04715 Anthranilate synthase component I, N terminal region A8A54_07410 PF01037 Lrp/AsnC ligand binding domain A8A54_07430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A8A54_07430 PF03466 LysR substrate binding domain A8A54_07445 PF04069 Substrate binding domain of ABC-type glycine betaine transport system A8A54_07450 PF00528 Binding-protein-dependent transport system inner membrane component A8A54_07455 PF00571 CBS domain A8A54_07455 PF00005 ABC transporter A8A54_07460 PF00005 ABC transporter A8A54_07460 PF08352 Oligopeptide/dipeptide transporter, C-terminal region A8A54_07470 PF12911 N-terminal TM domain of oligopeptide transport permease C A8A54_07470 PF00528 Binding-protein-dependent transport system inner membrane component A8A54_07475 PF00528 Binding-protein-dependent transport system inner membrane component A8A54_07480 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle A8A54_07490 PF00588 SpoU rRNA Methylase family A8A54_07520 PF10090 Histidine phosphotransferase C-terminal domain A8A54_07525 PF00072 Response regulator receiver domain A8A54_07525 PF00486 Transcriptional regulatory protein, C terminal A8A54_07535 PF08279 HTH domain A8A54_07535 PF13280 WYL domain A8A54_07545 PF05145 Transition state regulatory protein AbrB A8A54_07550 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family A8A54_07555 PF02894 Oxidoreductase family, C-terminal alpha/beta domain A8A54_07555 PF01408 Oxidoreductase family, NAD-binding Rossmann fold A8A54_07575 PF00664 ABC transporter transmembrane region A8A54_07575 PF03412 Peptidase C39 family A8A54_07575 PF00005 ABC transporter A8A54_07580 PF02321 Outer membrane efflux protein A8A54_07590 PF12833 Helix-turn-helix domain A8A54_07600 PF02423 Ornithine cyclodeaminase/mu-crystallin family A8A54_07605 PF00491 Arginase family A8A54_07615 PF00724 NADH:flavin oxidoreductase / NADH oxidase family A8A54_07625 PF00575 S1 RNA binding domain A8A54_07625 PF16921 Tex protein YqgF-like domain A8A54_07625 PF09371 Tex-like protein N-terminal domain A8A54_07625 PF17674 HHH domain A8A54_07630 PF00005 ABC transporter A8A54_07630 PF17912 MalK OB fold domain A8A54_07635 PF00528 Binding-protein-dependent transport system inner membrane component A8A54_07640 PF13416 Bacterial extracellular solute-binding protein A8A54_07645 PF01266 FAD dependent oxidoreductase A8A54_07650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A8A54_07650 PF03466 LysR substrate binding domain A8A54_07655 PF07063 Domain of unknown function (DUF1338) A8A54_07660 PF00171 Aldehyde dehydrogenase family A8A54_07665 PF00551 Formyl transferase A8A54_07670 PF01380 SIS domain A8A54_07675 PF00873 AcrB/AcrD/AcrF family A8A54_07680 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion A8A54_07680 PF00529 HlyD membrane-fusion protein of T1SS A8A54_07685 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion A8A54_07695 PF00384 Molybdopterin oxidoreductase A8A54_07700 PF01070 FMN-dependent dehydrogenase A8A54_07705 PF13505 Outer membrane protein beta-barrel domain A8A54_07710 PF01037 Lrp/AsnC ligand binding domain A8A54_07715 PF01168 Alanine racemase, N-terminal domain A8A54_07715 PF00842 Alanine racemase, C-terminal domain A8A54_07720 PF01266 FAD dependent oxidoreductase A8A54_07735 PF01037 Lrp/AsnC ligand binding domain A8A54_07745 PF00202 Aminotransferase class-III A8A54_07760 PF01979 Amidohydrolase family A8A54_07765 PF00221 Aromatic amino acid lyase A8A54_07775 PF17392 Urocanase C-terminal domain A8A54_07775 PF01175 Urocanase Rossmann-like domain A8A54_07775 PF17391 Urocanase N-terminal domain A8A54_07785 PF05962 HutD A8A54_07795 PF00528 Binding-protein-dependent transport system inner membrane component A8A54_07800 PF00005 ABC transporter A8A54_07805 PF01063 Amino-transferase class IV A8A54_07810 PF02653 Branched-chain amino acid transport system / permease component A8A54_07815 PF00005 ABC transporter A8A54_07820 PF13407 Periplasmic binding protein domain A8A54_07825 PF01081 KDPG and KHG aldolase A8A54_07830 PF05035 2-keto-3-deoxy-galactonokinase A8A54_07835 PF00920 Dehydratase family A8A54_07840 PF01408 Oxidoreductase family, NAD-binding Rossmann fold A8A54_07850 PF13407 Periplasmic binding protein domain A8A54_07855 PF00005 ABC transporter A8A54_07860 PF02653 Branched-chain amino acid transport system / permease component A8A54_07865 PF02653 Branched-chain amino acid transport system / permease component A8A54_07870 PF07729 FCD domain A8A54_07870 PF00392 Bacterial regulatory proteins, gntR family A8A54_07880 PF00144 Beta-lactamase A8A54_07880 PF07930 D-aminopeptidase, domain B A8A54_07890 PF00108 Thiolase, N-terminal domain A8A54_07890 PF02803 Thiolase, C-terminal domain A8A54_07895 PF00106 short chain dehydrogenase A8A54_07900 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain A8A54_07900 PF00205 Thiamine pyrophosphate enzyme, central domain A8A54_07900 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain A8A54_07905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A8A54_07905 PF03466 LysR substrate binding domain A8A54_07915 PF00005 ABC transporter A8A54_07915 PF12399 Branched-chain amino acid ATP-binding cassette transporter A8A54_07920 PF00005 ABC transporter A8A54_07925 PF02653 Branched-chain amino acid transport system / permease component A8A54_07935 PF00732 GMC oxidoreductase A8A54_07935 PF05199 GMC oxidoreductase A8A54_07940 PF03180 NLPA lipoprotein A8A54_07945 PF00005 ABC transporter A8A54_07945 PF09383 NIL domain A8A54_07950 PF00528 Binding-protein-dependent transport system inner membrane component A8A54_07965 PF01165 Ribosomal protein S21 A8A54_07975 PF01575 MaoC like domain A8A54_07980 PF13419 Haloacid dehalogenase-like hydrolase A8A54_07990 PF02233 NAD(P) transhydrogenase beta subunit A8A54_07995 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch A8A54_08000 PF01262 Alanine dehydrogenase/PNT, C-terminal domain A8A54_08000 PF05222 Alanine dehydrogenase/PNT, N-terminal domain A8A54_08015 PF00144 Beta-lactamase A8A54_08020 PF08447 PAS fold A8A54_08020 PF08448 PAS fold A8A54_08020 PF00563 EAL domain A8A54_08020 PF00990 Diguanylate cyclase, GGDEF domain A8A54_08030 PF07722 Peptidase C26 A8A54_08035 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain A8A54_08035 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain A8A54_08040 PF00356 Bacterial regulatory proteins, lacI family A8A54_08045 PF01047 MarR family A8A54_08050 PF02633 Creatinine amidohydrolase A8A54_08055 PF07683 Cobalamin synthesis protein cobW C-terminal domain A8A54_08055 PF02492 CobW/HypB/UreG, nucleotide-binding domain A8A54_08065 PF01738 Dienelactone hydrolase family A8A54_08070 PF00174 Oxidoreductase molybdopterin binding domain A8A54_08075 PF01794 Ferric reductase like transmembrane component A8A54_08085 PF01042 Endoribonuclease L-PSP A8A54_08095 PF00468 Ribosomal protein L34 A8A54_08100 PF00825 Ribonuclease P A8A54_08105 PF14849 YidC periplasmic domain A8A54_08105 PF02096 60Kd inner membrane protein A8A54_08110 PF01926 50S ribosome-binding GTPase A8A54_08120 PF00696 Amino acid kinase family A8A54_08130 PF05675 Protein of unknown function (DUF817) A8A54_08140 PF00132 Bacterial transferase hexapeptide (six repeats) A8A54_08140 PF14602 Hexapeptide repeat of succinyl-transferase A8A54_08140 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal A8A54_08160 PF01546 Peptidase family M20/M25/M40 A8A54_08160 PF07687 Peptidase dimerisation domain A8A54_08170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A8A54_08170 PF03466 LysR substrate binding domain A8A54_08175 PF08240 Alcohol dehydrogenase GroES-like domain A8A54_08175 PF00107 Zinc-binding dehydrogenase A8A54_08180 PF01416 tRNA pseudouridine synthase A8A54_08185 PF02911 Formyl transferase, C-terminal domain A8A54_08185 PF00551 Formyl transferase A8A54_08190 PF01327 Polypeptide deformylase A8A54_08205 PF06421 GTP-binding protein LepA C-terminus A8A54_08205 PF03144 Elongation factor Tu domain 2 A8A54_08205 PF00679 Elongation factor G C-terminus A8A54_08205 PF00009 Elongation factor Tu GTP binding domain A8A54_08220 PF02673 Bacitracin resistance protein BacA A8A54_08225 PF00043 Glutathione S-transferase, C-terminal domain A8A54_08225 PF13417 Glutathione S-transferase, N-terminal domain A8A54_08230 PF08331 Domain of unknown function (DUF1730) A8A54_08240 PF03411 Penicillin-insensitive murein endopeptidase A8A54_08245 PF02142 MGS-like domain A8A54_08250 PF02685 Glucokinase A8A54_08255 PF00005 ABC transporter A8A54_08255 PF00664 ABC transporter transmembrane region A8A54_08260 PF05173 Dihydrodipicolinate reductase, C-terminus A8A54_08260 PF01113 Dihydrodipicolinate reductase, N-terminus A8A54_08265 PF00300 Histidine phosphatase superfamily (branch 1) A8A54_08280 PF00171 Aldehyde dehydrogenase family A8A54_08290 PF13091 PLD-like domain A8A54_08300 PF16658 Class II release factor RF3, C-terminal domain A8A54_08300 PF03144 Elongation factor Tu domain 2 A8A54_08300 PF00009 Elongation factor Tu GTP binding domain A8A54_08305 PF01636 Phosphotransferase enzyme family A8A54_08310 PF12680 SnoaL-like domain A8A54_08310 PF08281 Sigma-70, region 4 A8A54_08310 PF04542 Sigma-70 region 2 A8A54_08315 PF02627 Carboxymuconolactone decarboxylase family A8A54_08320 PF02441 Flavoprotein A8A54_08320 PF04127 DNA / pantothenate metabolism flavoprotein A8A54_08325 PF03109 ABC1 family A8A54_08330 PF01209 ubiE/COQ5 methyltransferase family A8A54_08340 PF04102 SlyX A8A54_08350 PF01625 Peptide methionine sulfoxide reductase A8A54_08415 PF00171 Aldehyde dehydrogenase family A8A54_08440 PF00749 tRNA synthetases class I (E and Q), catalytic domain A8A54_08445 PF01274 Malate synthase A8A54_08455 PF00583 Acetyltransferase (GNAT) family A8A54_08465 PF01740 STAS domain A8A54_08465 PF00916 Sulfate permease family A8A54_08470 PF07690 Major Facilitator Superfamily A8A54_08490 PF01037 Lrp/AsnC ligand binding domain A8A54_08490 PF13404 AsnC-type helix-turn-helix domain A8A54_08500 PF00692 dUTPase A8A54_08505 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion A8A54_08510 PF12704 MacB-like periplasmic core domain A8A54_08510 PF00005 ABC transporter A8A54_08510 PF02687 FtsX-like permease family A8A54_08520 PF02472 Biopolymer transport protein ExbD/TolR A8A54_08525 PF01618 MotA/TolQ/ExbB proton channel family A8A54_08540 PF07568 Histidine kinase A8A54_08540 PF13581 Histidine kinase-like ATPase domain A8A54_08540 PF13426 PAS domain A8A54_08545 PF08281 Sigma-70, region 4 A8A54_08545 PF04542 Sigma-70 region 2 A8A54_08555 PF00072 Response regulator receiver domain A8A54_08560 PF07536 HWE histidine kinase A8A54_08560 PF08447 PAS fold A8A54_08560 PF13426 PAS domain A8A54_08565 PF01475 Ferric uptake regulator family A8A54_08590 PF00849 RNA pseudouridylate synthase A8A54_08595 PF00140 Sigma-70 factor, region 1.2 A8A54_08595 PF04542 Sigma-70 region 2 A8A54_08595 PF04545 Sigma-70, region 4 A8A54_08600 PF00719 Inorganic pyrophosphatase A8A54_08610 PF00709 Adenylosuccinate synthetase A8A54_08620 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain A8A54_08620 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain A8A54_08620 PF01842 ACT domain A8A54_08625 PF00266 Aminotransferase class-V A8A54_08630 PF01758 Sodium Bile acid symporter family A8A54_08640 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II A8A54_08640 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III A8A54_08640 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain A8A54_08640 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I A8A54_08645 PF01434 Peptidase family M41 A8A54_08645 PF00004 ATPase family associated with various cellular activities (AAA) A8A54_08645 PF17862 AAA+ lid domain A8A54_08645 PF06480 FtsH Extracellular A8A54_08650 PF01171 PP-loop family A8A54_08665 PF00691 OmpA family A8A54_08670 PF07676 WD40-like Beta Propeller Repeat A8A54_08670 PF04052 TolB amino-terminal domain A8A54_08680 PF02472 Biopolymer transport protein ExbD/TolR A8A54_08685 PF01618 MotA/TolQ/ExbB proton channel family A8A54_08690 PF03061 Thioesterase superfamily A8A54_08695 PF05496 Holliday junction DNA helicase RuvB P-loop domain A8A54_08695 PF05491 RuvB C-terminal winged helix domain A8A54_08695 PF17864 RuvB AAA lid domain A8A54_08700 PF07499 RuvA, C-terminal domain A8A54_08700 PF01330 RuvA N terminal domain A8A54_08705 PF02075 Crossover junction endodeoxyribonuclease RuvC A8A54_08735 PF08207 Elongation factor P (EF-P) KOW-like domain A8A54_08735 PF01132 Elongation factor P (EF-P) OB domain A8A54_08735 PF09285 Elongation factor P, C-terminal A8A54_08740 PF00459 Inositol monophosphatase family A8A54_08750 PF00691 OmpA family A8A54_08750 PF01389 OmpA-like transmembrane domain A8A54_08755 PF00005 ABC transporter A8A54_08755 PF00664 ABC transporter transmembrane region A8A54_08760 PF01197 Ribosomal protein L31 A8A54_08770 PF01709 Transcriptional regulator A8A54_08780 PF02632 BioY family A8A54_08790 PF13277 YmdB-like protein A8A54_08820 PF02779 Transketolase, pyrimidine binding domain A8A54_08820 PF00456 Transketolase, thiamine diphosphate binding domain A8A54_08820 PF02780 Transketolase, C-terminal domain A8A54_08825 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain A8A54_08825 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain A8A54_08835 PF00162 Phosphoglycerate kinase A8A54_08840 PF07995 Glucose / Sorbosone dehydrogenase A8A54_08845 PF00274 Fructose-bisphosphate aldolase class-I A8A54_08850 PF16177 Acetyl-coenzyme A synthetase N-terminus A8A54_08850 PF13193 AMP-binding enzyme C-terminal domain A8A54_08850 PF00501 AMP-binding enzyme A8A54_08865 PF01965 DJ-1/PfpI family A8A54_08880 PF00107 Zinc-binding dehydrogenase A8A54_08880 PF08240 Alcohol dehydrogenase GroES-like domain A8A54_08905 PF00731 AIR carboxylase A8A54_08910 PF02222 ATP-grasp domain A8A54_08910 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain A8A54_08915 PF00444 Ribosomal protein L36 A8A54_08925 PF00224 Pyruvate kinase, barrel domain A8A54_08925 PF02887 Pyruvate kinase, alpha/beta domain A8A54_08940 PF10073 Uncharacterized protein conserved in bacteria (DUF2312) A8A54_08945 PF00248 Aldo/keto reductase family A8A54_08965 PF01547 Bacterial extracellular solute-binding protein A8A54_08970 PF00528 Binding-protein-dependent transport system inner membrane component A8A54_08975 PF00005 ABC transporter A8A54_08980 PF01435 Peptidase family M48 A8A54_08985 PF03473 MOSC domain A8A54_08985 PF03475 3-alpha domain A8A54_08990 PF00140 Sigma-70 factor, region 1.2 A8A54_08990 PF04545 Sigma-70, region 4 A8A54_08990 PF04542 Sigma-70 region 2 A8A54_09000 PF00037 4Fe-4S binding domain A8A54_09000 PF11953 Domain of unknown function (DUF3470) A8A54_09015 PF02803 Thiolase, C-terminal domain A8A54_09015 PF00108 Thiolase, N-terminal domain A8A54_09025 PF01783 Ribosomal L32p protein family A8A54_09030 PF00912 Transglycosylase A8A54_09035 PF00348 Polyprenyl synthetase A8A54_09040 PF01638 HxlR-like helix-turn-helix A8A54_09045 PF07690 Major Facilitator Superfamily A8A54_09050 PF04551 GcpE protein A8A54_09060 PF07690 Major Facilitator Superfamily A8A54_09070 PF02436 Conserved carboxylase domain A8A54_09070 PF00682 HMGL-like A8A54_09070 PF02785 Biotin carboxylase C-terminal domain A8A54_09070 PF00289 Biotin carboxylase, N-terminal domain A8A54_09070 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain A8A54_09070 PF00364 Biotin-requiring enzyme A8A54_09075 PF13458 Periplasmic binding protein A8A54_09080 PF13458 Periplasmic binding protein A8A54_09090 PF00005 ABC transporter A8A54_09095 PF00005 ABC transporter A8A54_09095 PF12399 Branched-chain amino acid ATP-binding cassette transporter A8A54_09100 PF02653 Branched-chain amino acid transport system / permease component A8A54_09100 PF11862 Domain of unknown function (DUF3382) A8A54_09105 PF02653 Branched-chain amino acid transport system / permease component A8A54_09110 PF05544 Proline racemase A8A54_09115 PF01266 FAD dependent oxidoreductase A8A54_09130 PF01047 MarR family A8A54_09135 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain A8A54_09140 PF02874 ATP synthase alpha/beta family, beta-barrel domain A8A54_09140 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain A8A54_09145 PF00231 ATP synthase A8A54_09150 PF02874 ATP synthase alpha/beta family, beta-barrel domain A8A54_09150 PF00306 ATP synthase alpha/beta chain, C terminal domain A8A54_09150 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain A8A54_09155 PF00213 ATP synthase delta (OSCP) subunit A8A54_09165 PF18319 PriA DNA helicase Cys-rich region (CRR) domain A8A54_09165 PF00270 DEAD/DEAH box helicase A8A54_09165 PF17764 3′ DNA-binding domain (3′BD) A8A54_09165 PF18074 Primosomal protein N C-terminal domain A8A54_09170 PF00923 Transaldolase/Fructose-6-phosphate aldolase A8A54_09185 PF09334 tRNA synthetases class I (M) A8A54_09185 PF13603 Leucyl-tRNA synthetase, Domain 2 A8A54_09185 PF00133 tRNA synthetases class I (I, L, M and V) A8A54_09185 PF08264 Anticodon-binding domain of tRNA A8A54_09190 PF01168 Alanine racemase, N-terminal domain A8A54_09200 PF06233 Usg-like family A8A54_09205 PF13193 AMP-binding enzyme C-terminal domain A8A54_09205 PF00501 AMP-binding enzyme A8A54_09205 PF16177 Acetyl-coenzyme A synthetase N-terminus A8A54_09220 PF01435 Peptidase family M48 A8A54_09225 PF01029 NusB family A8A54_09225 PF01189 16S rRNA methyltransferase RsmB/F A8A54_09235 PF01808 AICARFT/IMPCHase bienzyme A8A54_09235 PF02142 MGS-like domain A8A54_09240 PF02782 FGGY family of carbohydrate kinases, C-terminal domain A8A54_09240 PF00370 FGGY family of carbohydrate kinases, N-terminal domain A8A54_09245 PF00230 Major intrinsic protein A8A54_09250 PF11700 Vacuole effluxer Atg22 like A8A54_09255 PF05088 Bacterial NAD-glutamate dehydrogenase A8A54_09265 PF04536 TPM domain A8A54_09270 PF04011 LemA family A8A54_09280 PF00886 Ribosomal protein S16 A8A54_09285 PF02153 Prephenate dehydrogenase A8A54_09285 PF01817 Chorismate mutase type II A8A54_09290 PF02881 SRP54-type protein, helical bundle domain A8A54_09290 PF02978 Signal peptide binding domain A8A54_09290 PF00448 SRP54-type protein, GTPase domain A8A54_09295 PF02652 L-lactate permease A8A54_09305 PF00484 Carbonic anhydrase A8A54_09310 PF08543 Phosphomethylpyrimidine kinase A8A54_09320 PF00107 Zinc-binding dehydrogenase A8A54_09320 PF16884 N-terminal domain of oxidoreductase A8A54_09330 PF00171 Aldehyde dehydrogenase family A8A54_09350 PF00293 NUDIX domain A8A54_09355 PF03572 Peptidase family S41 A8A54_09355 PF13180 PDZ domain A8A54_09375 PF01501 Glycosyl transferase family 8 A8A54_09380 PF02590 Predicted SPOUT methyltransferase A8A54_09390 PF01467 Cytidylyltransferase-like A8A54_09395 PF00171 Aldehyde dehydrogenase family A8A54_09400 PF01472 PUA domain A8A54_09400 PF00696 Amino acid kinase family A8A54_09405 PF01018 GTP1/OBG A8A54_09405 PF01926 50S ribosome-binding GTPase A8A54_09420 PF01016 Ribosomal L27 protein A8A54_09425 PF00829 Ribosomal prokaryotic L21 protein A8A54_09435 PF03358 NADPH-dependent FMN reductase A8A54_09440 PF00849 RNA pseudouridylate synthase A8A54_09445 PF04445 Putative SAM-dependent methyltransferase A8A54_09455 PF01554 MatE A8A54_09460 PF14497 Glutathione S-transferase, C-terminal domain A8A54_09460 PF02798 Glutathione S-transferase, N-terminal domain A8A54_09495 PF00005 ABC transporter A8A54_09495 PF08352 Oligopeptide/dipeptide transporter, C-terminal region A8A54_09505 PF00528 Binding-protein-dependent transport system inner membrane component A8A54_09510 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle A8A54_09520 PF00202 Aminotransferase class-III A8A54_09535 PF01266 FAD dependent oxidoreductase A8A54_09540 PF00171 Aldehyde dehydrogenase family A8A54_09545 PF00180 Isocitrate/isopropylmalate dehydrogenase A8A54_09555 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain A8A54_09565 PF00440 Bacterial regulatory proteins, tetR family A8A54_09575 PF00117 Glutamine amidotransferase class-I A8A54_09575 PF00958 GMP synthase C terminal domain A8A54_09575 PF02540 NAD synthase A8A54_09590 PF01189 16S rRNA methyltransferase RsmB/F A8A54_09590 PF01029 NusB family A8A54_09595 PF00199 Catalase A8A54_09595 PF06628 Catalase-related immune-responsive A8A54_09600 PF03466 LysR substrate binding domain A8A54_09600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A8A54_09605 PF00478 IMP dehydrogenase / GMP reductase domain A8A54_09605 PF00571 CBS domain A8A54_09610 PF00654 Voltage gated chloride channel A8A54_09615 PF03576 Peptidase family S58 A8A54_09620 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III A8A54_09620 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain A8A54_09620 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I A8A54_09620 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II A8A54_09625 PF01050 Mannose-6-phosphate isomerase A8A54_09625 PF00483 Nucleotidyl transferase A8A54_09630 PF08676 MutL C terminal dimerisation domain A8A54_09630 PF01119 DNA mismatch repair protein, C-terminal domain A8A54_09640 PF02606 Tetraacyldisaccharide-1-P 4'-kinase A8A54_09645 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) A8A54_09660 PF00459 Inositol monophosphatase family A8A54_09665 PF01523 Putative modulator of DNA gyrase A8A54_09670 PF02254 TrkA-N domain A8A54_09670 PF00999 Sodium/hydrogen exchanger family A8A54_09675 PF01734 Patatin-like phospholipase A8A54_09680 PF05193 Peptidase M16 inactive domain A8A54_09685 PF00675 Insulinase (Peptidase family M16) A8A54_09685 PF05193 Peptidase M16 inactive domain A8A54_09695 PF00849 RNA pseudouridylate synthase A8A54_09695 PF01479 S4 domain A8A54_09700 PF14437 MafB19-like deaminase A8A54_09705 PF01292 Prokaryotic cytochrome b561 A8A54_09715 PF00133 tRNA synthetases class I (I, L, M and V) A8A54_09715 PF08264 Anticodon-binding domain of tRNA A8A54_09725 PF06574 FAD synthetase A8A54_09725 PF01687 Riboflavin kinase A8A54_09735 PF00166 Chaperonin 10 Kd subunit A8A54_09740 PF00118 TCP-1/cpn60 chaperonin family A8A54_09760 PF00206 Lyase A8A54_09760 PF10415 Fumarase C C-terminus A8A54_09765 PF07681 DoxX A8A54_09770 PF07690 Major Facilitator Superfamily A8A54_09775 PF01634 ATP phosphoribosyltransferase A8A54_09780 PF13393 Histidyl-tRNA synthetase A8A54_09785 PF03129 Anticodon binding domain A8A54_09785 PF13393 Histidyl-tRNA synthetase A8A54_09795 PF03352 Methyladenine glycosylase A8A54_09800 PF17969 L,D-transpeptidase C-terminal domain A8A54_09800 PF03734 L,D-transpeptidase catalytic domain A8A54_09800 PF01476 LysM domain A8A54_09805 PF00248 Aldo/keto reductase family A8A54_09815 PF01037 Lrp/AsnC ligand binding domain A8A54_09820 PF02754 Cysteine-rich domain A8A54_09820 PF13183 4Fe-4S dicluster domain A8A54_09825 PF01565 FAD binding domain A8A54_09830 PF01565 FAD binding domain A8A54_09830 PF02913 FAD linked oxidases, C-terminal domain A8A54_09835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A8A54_09835 PF03466 LysR substrate binding domain A8A54_09845 PF07729 FCD domain A8A54_09845 PF00392 Bacterial regulatory proteins, gntR family A8A54_09860 PF13533 Biotin-lipoyl like A8A54_09875 PF01047 MarR family A8A54_09880 PF04452 RNA methyltransferase A8A54_09885 PF04107 Glutamate-cysteine ligase family 2(GCS2) A8A54_09890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A8A54_09890 PF03466 LysR substrate binding domain A8A54_09905 PF17969 L,D-transpeptidase C-terminal domain A8A54_09905 PF03734 L,D-transpeptidase catalytic domain A8A54_09910 PF02601 Exonuclease VII, large subunit A8A54_09910 PF13742 OB-fold nucleic acid binding domain A8A54_09915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A8A54_09915 PF03466 LysR substrate binding domain A8A54_10050 PF00589 Phage integrase family A8A54_10050 PF02899 Phage integrase, N-terminal SAM-like domain A8A54_10075 PF13505 Outer membrane protein beta-barrel domain A8A54_10080 PF00860 Permease family A8A54_10085 PF02653 Branched-chain amino acid transport system / permease component A8A54_10090 PF00005 ABC transporter A8A54_10095 PF13407 Periplasmic binding protein domain A8A54_10100 PF00356 Bacterial regulatory proteins, lacI family A8A54_10105 PF02782 FGGY family of carbohydrate kinases, C-terminal domain A8A54_10105 PF00370 FGGY family of carbohydrate kinases, N-terminal domain A8A54_10110 PF01261 Xylose isomerase-like TIM barrel A8A54_10115 PF08019 Phosphoethanolamine transferase EptA/EptB A8A54_10115 PF00884 Sulfatase A8A54_10120 PF02894 Oxidoreductase family, C-terminal alpha/beta domain A8A54_10120 PF01408 Oxidoreductase family, NAD-binding Rossmann fold A8A54_10130 PF13407 Periplasmic binding protein domain A8A54_10135 PF02653 Branched-chain amino acid transport system / permease component A8A54_10140 PF00005 ABC transporter A8A54_10150 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) A8A54_10150 PF00512 His Kinase A (phospho-acceptor) domain A8A54_10150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A8A54_10150 PF00672 HAMP domain A8A54_10150 PF00072 Response regulator receiver domain A8A54_10150 PF01627 Hpt domain A8A54_10155 PF00990 Diguanylate cyclase, GGDEF domain A8A54_10155 PF00072 Response regulator receiver domain A8A54_10160 PF05977 Transmembrane secretion effector A8A54_10180 PF00202 Aminotransferase class-III A8A54_10185 PF16363 GDP-mannose 4,6 dehydratase A8A54_10195 PF01565 FAD binding domain A8A54_10195 PF04030 D-arabinono-1,4-lactone oxidase A8A54_10200 PF01040 UbiA prenyltransferase family A8A54_10205 PF00563 EAL domain A8A54_10205 PF00990 Diguanylate cyclase, GGDEF domain A8A54_10205 PF13426 PAS domain A8A54_10205 PF05231 MASE1 A8A54_10205 PF08447 PAS fold A8A54_10205 PF08448 PAS fold A8A54_10210 PF01205 Uncharacterized protein family UPF0029 A8A54_10215 PF07969 Amidohydrolase family A8A54_10225 PF01425 Amidase A8A54_10245 PF07969 Amidohydrolase family A8A54_10255 PF00571 CBS domain A8A54_10255 PF01769 Divalent cation transporter A8A54_10255 PF03448 MgtE intracellular N domain A8A54_10260 PF07690 Major Facilitator Superfamily A8A54_10265 PF01432 Peptidase family M3 A8A54_10280 PF03328 HpcH/HpaI aldolase/citrate lyase family A8A54_10300 PF00694 Aconitase C-terminal domain A8A54_10310 PF01810 LysE type translocator A8A54_10315 PF00701 Dihydrodipicolinate synthetase family A8A54_10320 PF02566 OsmC-like protein A8A54_10325 PF01047 MarR family A8A54_10330 PF02774 Semialdehyde dehydrogenase, dimerisation domain A8A54_10330 PF01118 Semialdehyde dehydrogenase, NAD binding domain A8A54_10335 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain A8A54_10335 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain A8A54_10335 PF01842 ACT domain A8A54_10345 PF00083 Sugar (and other) transporter A8A54_10350 PF02805 Metal binding domain of Ada A8A54_10350 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain A8A54_10350 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain A8A54_10350 PF12833 Helix-turn-helix domain A8A54_10360 PF00180 Isocitrate/isopropylmalate dehydrogenase A8A54_10365 PF03966 Trm112p-like protein A8A54_10370 PF02190 ATP-dependent protease La (LON) substrate-binding domain A8A54_10370 PF05362 Lon protease (S16) C-terminal proteolytic domain A8A54_10370 PF00004 ATPase family associated with various cellular activities (AAA) A8A54_10375 PF00085 Thioredoxin A8A54_10390 PF01032 FecCD transport family A8A54_10395 PF01032 FecCD transport family A8A54_10400 PF01497 Periplasmic binding protein A8A54_10405 PF00005 ABC transporter A8A54_10415 PF07715 TonB-dependent Receptor Plug Domain A8A54_10420 PF00296 Luciferase-like monooxygenase A8A54_10425 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain A8A54_10425 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain A8A54_10430 PF00890 FAD binding domain A8A54_10430 PF02910 Fumarate reductase flavoprotein C-term A8A54_10435 PF02445 Quinolinate synthetase A protein A8A54_10445 PF00497 Bacterial extracellular solute-binding proteins, family 3 A8A54_10450 PF00005 ABC transporter A8A54_10455 PF00528 Binding-protein-dependent transport system inner membrane component A8A54_10460 PF00528 Binding-protein-dependent transport system inner membrane component A8A54_10465 PF01546 Peptidase family M20/M25/M40 A8A54_10475 PF09339 IclR helix-turn-helix domain A8A54_10475 PF01614 Bacterial transcriptional regulator A8A54_10490 PF00497 Bacterial extracellular solute-binding proteins, family 3 A8A54_10495 PF00268 Ribonucleotide reductase, small chain A8A54_10500 PF02867 Ribonucleotide reductase, barrel domain A8A54_10500 PF00317 Ribonucleotide reductase, all-alpha domain A8A54_10500 PF08343 Ribonucleotide reductase N-terminal A8A54_10505 PF07972 NrdI Flavodoxin like A8A54_10510 PF00462 Glutaredoxin A8A54_10515 PF00106 short chain dehydrogenase A8A54_10520 PF00465 Iron-containing alcohol dehydrogenase A8A54_10540 PF00127 Copper binding proteins, plastocyanin/azurin family A8A54_10545 PF06472 ABC transporter transmembrane region 2 A8A54_10545 PF00005 ABC transporter A8A54_10550 PF00005 ABC transporter A8A54_10550 PF08402 TOBE domain A8A54_10555 PF13416 Bacterial extracellular solute-binding protein A8A54_10560 PF00528 Binding-protein-dependent transport system inner membrane component A8A54_10565 PF00528 Binding-protein-dependent transport system inner membrane component A8A54_10575 PF00728 Glycosyl hydrolase family 20, catalytic domain A8A54_10575 PF02838 Glycosyl hydrolase family 20, domain 2 A8A54_10585 PF03932 CutC family A8A54_10595 PF01380 SIS domain A8A54_10600 PF00480 ROK family A8A54_10605 PF01979 Amidohydrolase family A8A54_10610 PF08013 Tagatose 6 phosphate kinase A8A54_10615 PF07687 Peptidase dimerisation domain A8A54_10615 PF01546 Peptidase family M20/M25/M40 A8A54_10620 PF00005 ABC transporter A8A54_10625 PF00528 Binding-protein-dependent transport system inner membrane component A8A54_10630 PF00528 Binding-protein-dependent transport system inner membrane component A8A54_10635 PF00497 Bacterial extracellular solute-binding proteins, family 3 A8A54_10655 PF02423 Ornithine cyclodeaminase/mu-crystallin family A8A54_10660 PF01546 Peptidase family M20/M25/M40 A8A54_10665 PF00005 ABC transporter A8A54_10680 PF00497 Bacterial extracellular solute-binding proteins, family 3 A8A54_10690 PF00083 Sugar (and other) transporter A8A54_10690 PF08946 Osmosensory transporter coiled coil A8A54_10695 PF02441 Flavoprotein A8A54_10700 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase A8A54_10725 PF00639 PPIC-type PPIASE domain A8A54_10725 PF09312 SurA N-terminal domain A8A54_10730 PF02665 Nitrate reductase gamma subunit A8A54_10735 PF02613 Nitrate reductase delta subunit A8A54_10740 PF14711 Respiratory nitrate reductase beta C-terminal A8A54_10740 PF13247 4Fe-4S dicluster domain A8A54_10745 PF14710 Respiratory nitrate reductase alpha N-terminal A8A54_10745 PF01568 Molydopterin dinucleotide binding domain A8A54_10745 PF00384 Molybdopterin oxidoreductase A8A54_10750 PF07690 Major Facilitator Superfamily A8A54_10760 PF00092 von Willebrand factor type A domain A8A54_10765 PF07728 AAA domain (dynein-related subfamily) A8A54_10765 PF08406 CbbQ/NirQ/NorQ C-terminal A8A54_10770 PF00115 Cytochrome C and Quinol oxidase polypeptide I A8A54_10775 PF00034 Cytochrome c A8A54_10785 PF00510 Cytochrome c oxidase subunit III A8A54_10795 PF00484 Carbonic anhydrase A8A54_10815 PF01883 Iron-sulfur cluster assembly protein A8A54_10820 PF07732 Multicopper oxidase A8A54_10820 PF00394 Multicopper oxidase A8A54_10835 PF00561 alpha/beta hydrolase fold A8A54_10850 PF12833 Helix-turn-helix domain A8A54_10855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A8A54_10855 PF03466 LysR substrate binding domain A8A54_10860 PF07690 Major Facilitator Superfamily A8A54_10865 PF00190 Cupin A8A54_10870 PF00072 Response regulator receiver domain A8A54_10870 PF00196 Bacterial regulatory proteins, luxR family A8A54_10875 PF00072 Response regulator receiver domain A8A54_10875 PF00196 Bacterial regulatory proteins, luxR family A8A54_10880 PF08448 PAS fold A8A54_10880 PF13426 PAS domain A8A54_10880 PF00072 Response regulator receiver domain A8A54_10880 PF00512 His Kinase A (phospho-acceptor) domain A8A54_10880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A8A54_10895 PF03412 Peptidase C39 family A8A54_10895 PF00664 ABC transporter transmembrane region A8A54_10895 PF00005 ABC transporter A8A54_10900 PF02321 Outer membrane efflux protein A8A54_10910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A8A54_10910 PF00512 His Kinase A (phospho-acceptor) domain A8A54_10920 PF03741 Integral membrane protein TerC family A8A54_10935 PF00528 Binding-protein-dependent transport system inner membrane component A8A54_10940 PF00528 Binding-protein-dependent transport system inner membrane component A8A54_10950 PF00005 ABC transporter A8A54_10955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A8A54_10955 PF03466 LysR substrate binding domain A8A54_10970 PF00005 ABC transporter A8A54_10980 PF00245 Alkaline phosphatase A8A54_10995 PF01327 Polypeptide deformylase A8A54_11005 PF00376 MerR family regulatory protein A8A54_11005 PF13614 AAA domain A8A54_11010 PF02195 ParB-like nuclease domain A8A54_11010 PF07506 RepB plasmid partitioning protein A8A54_11015 PF11800 Replication protein C C-terminal region A8A54_11015 PF03428 Replication protein C N-terminal domain A8A54_11030 PF12792 CSS motif domain associated with EAL A8A54_11030 PF00563 EAL domain A8A54_11060 PF03797 Autotransporter beta-domain A8A54_11060 PF13018 Extended Signal Peptide of Type V secretion system A8A54_11060 PF16168 Adhesin of bacterial autotransporter system, probable stalk A8A54_11065 PF03350 Uncharacterized protein family, UPF0114 A8A54_11070 PF00486 Transcriptional regulatory protein, C terminal A8A54_11070 PF00072 Response regulator receiver domain A8A54_11075 PF02702 Osmosensitive K+ channel His kinase sensor domain A8A54_11075 PF13493 Domain of unknown function (DUF4118) A8A54_11075 PF00512 His Kinase A (phospho-acceptor) domain A8A54_11075 PF13492 GAF domain A8A54_11075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A8A54_11080 PF02669 K+-transporting ATPase, c chain A8A54_11090 PF03814 Potassium-transporting ATPase A subunit A8A54_11100 PF00710 Asparaginase, N-terminal A8A54_11100 PF17763 Glutaminase/Asparaginase C-terminal domain A8A54_11105 PF00324 Amino acid permease A8A54_11110 PF00206 Lyase A8A54_11110 PF10415 Fumarase C C-terminus A8A54_11115 PF00392 Bacterial regulatory proteins, gntR family A8A54_11115 PF07729 FCD domain A8A54_11120 PF01613 Flavin reductase like domain A8A54_11130 PF03972 MmgE/PrpD family A8A54_11135 PF00005 ABC transporter A8A54_11140 PF00528 Binding-protein-dependent transport system inner membrane component A8A54_11145 PF00528 Binding-protein-dependent transport system inner membrane component A8A54_11150 PF00497 Bacterial extracellular solute-binding proteins, family 3 A8A54_11155 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain A8A54_11155 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain A8A54_11155 PF00207 Alpha-2-macroglobulin family A8A54_11155 PF17962 Bacterial macroglobulin domain 6 A8A54_11155 PF01835 MG2 domain A8A54_11155 PF07678 A-macroglobulin TED domain A8A54_11155 PF07703 Alpha-2-macroglobulin bait region domain A8A54_11155 PF11974 Bacterial alpha-2-macroglobulin MG3 domain A8A54_11155 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain A8A54_11160 PF00912 Transglycosylase A8A54_11160 PF00905 Penicillin binding protein transpeptidase domain A8A54_11160 PF06832 Penicillin-Binding Protein C-terminus Family A8A54_11185 PF00294 pfkB family carbohydrate kinase A8A54_11190 PF01156 Inosine-uridine preferring nucleoside hydrolase A8A54_11215 PF02608 ABC transporter substrate-binding protein PnrA-like A8A54_11225 PF00005 ABC transporter A8A54_11225 PF08402 TOBE domain A8A54_11230 PF00528 Binding-protein-dependent transport system inner membrane component A8A54_11235 PF00528 Binding-protein-dependent transport system inner membrane component A8A54_11245 PF07992 Pyridine nucleotide-disulphide oxidoreductase A8A54_11245 PF04324 BFD-like [2Fe-2S] binding domain A8A54_11260 PF07690 Major Facilitator Superfamily A8A54_11265 PF01022 Bacterial regulatory protein, arsR family A8A54_11275 PF02719 Polysaccharide biosynthesis protein A8A54_11280 PF00953 Glycosyl transferase family 4 A8A54_11315 PF02530 Porin subfamily A8A54_11335 PF00072 Response regulator receiver domain A8A54_11345 PF00459 Inositol monophosphatase family A8A54_11360 PF00011 Hsp20/alpha crystallin family A8A54_11365 PF01212 Beta-eliminating lyase A8A54_11370 PF01645 Conserved region in glutamate synthase A8A54_11370 PF04898 Glutamate synthase central domain A8A54_11370 PF01493 GXGXG motif A8A54_11370 PF00310 Glutamine amidotransferases class-II A8A54_11375 PF07992 Pyridine nucleotide-disulphide oxidoreductase A8A54_11375 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster A8A54_11380 PF00324 Amino acid permease A8A54_11390 PF13406 Transglycosylase SLT domain A8A54_11395 PF00483 Nucleotidyl transferase A8A54_11400 PF01774 UreD urease accessory protein A8A54_11405 PF00547 Urease, gamma subunit A8A54_11415 PF00699 Urease beta subunit A8A54_11420 PF01979 Amidohydrolase family A8A54_11420 PF00449 Urease alpha-subunit, N-terminal domain A8A54_11425 PF02814 UreE urease accessory protein, N-terminal domain A8A54_11425 PF05194 UreE urease accessory protein, C-terminal domain A8A54_11430 PF01730 UreF A8A54_11435 PF02492 CobW/HypB/UreG, nucleotide-binding domain A8A54_11440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A8A54_11440 PF03466 LysR substrate binding domain A8A54_11445 PF07715 TonB-dependent Receptor Plug Domain A8A54_11445 PF00593 TonB dependent receptor A8A54_11450 PF01497 Periplasmic binding protein A8A54_11455 PF01032 FecCD transport family A8A54_11465 PF03466 LysR substrate binding domain A8A54_11465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A8A54_11475 PF00248 Aldo/keto reductase family A8A54_11485 PF00571 CBS domain A8A54_11485 PF01380 SIS domain A8A54_11490 PF01957 NfeD-like C-terminal, partner-binding A8A54_11495 PF01145 SPFH domain / Band 7 family A8A54_11495 PF16200 C-terminal region of band_7 A8A54_11500 PF00762 Ferrochelatase A8A54_11510 PF03435 Saccharopine dehydrogenase NADP binding domain A8A54_11510 PF16653 Saccharopine dehydrogenase C-terminal domain A8A54_11520 PF04715 Anthranilate synthase component I, N terminal region A8A54_11520 PF00425 chorismate binding enzyme A8A54_11530 PF00158 Sigma-54 interaction domain A8A54_11530 PF00072 Response regulator receiver domain A8A54_11530 PF02954 Bacterial regulatory protein, Fis family A8A54_11535 PF05951 Bacterial protein of unknown function (DUF882) A8A54_11540 PF01081 KDPG and KHG aldolase A8A54_11560 PF00528 Binding-protein-dependent transport system inner membrane component A8A54_11565 PF03459 TOBE domain A8A54_11565 PF00005 ABC transporter A8A54_11580 PF03824 High-affinity nickel-transport protein A8A54_11590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A8A54_11590 PF03466 LysR substrate binding domain A8A54_11595 PF01425 Amidase A8A54_11600 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain A8A54_11600 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain A8A54_11605 PF13508 Acetyltransferase (GNAT) domain A8A54_11610 PF02706 Chain length determinant protein A8A54_11610 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain A8A54_11610 PF13807 G-rich domain on putative tyrosine kinase A8A54_11625 PF03808 Glycosyl transferase WecB/TagA/CpsF family A8A54_11645 PF01408 Oxidoreductase family, NAD-binding Rossmann fold A8A54_11645 PF02894 Oxidoreductase family, C-terminal alpha/beta domain A8A54_11650 PF02894 Oxidoreductase family, C-terminal alpha/beta domain A8A54_11650 PF01408 Oxidoreductase family, NAD-binding Rossmann fold A8A54_11660 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain A8A54_11660 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase A8A54_11665 PF08402 TOBE domain A8A54_11665 PF00005 ABC transporter A8A54_11685 PF07690 Major Facilitator Superfamily A8A54_11690 PF13533 Biotin-lipoyl like A8A54_11695 PF17922 Tetracyclin repressor-like, C-terminal domain A8A54_11695 PF00440 Bacterial regulatory proteins, tetR family A8A54_11700 PF00196 Bacterial regulatory proteins, luxR family A8A54_11700 PF03472 Autoinducer binding domain A8A54_11710 PF01312 FlhB HrpN YscU SpaS Family A8A54_11715 PF14841 FliG middle domain A8A54_11715 PF14842 FliG N-terminal domain A8A54_11715 PF01706 FliG C-terminal domain A8A54_11720 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term A8A54_11735 PF01618 MotA/TolQ/ExbB proton channel family A8A54_11745 PF00460 Flagella basal body rod protein A8A54_11745 PF06429 Flagellar basal body rod FlgEFG protein C-terminal A8A54_11750 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain A8A54_11750 PF18269 T3SS EscN ATPase C-terminal domain A8A54_11760 PF00460 Flagella basal body rod protein A8A54_11765 PF00460 Flagella basal body rod protein A8A54_11765 PF06429 Flagellar basal body rod FlgEFG protein C-terminal A8A54_11770 PF02049 Flagellar hook-basal body complex protein FliE A8A54_11775 PF06429 Flagellar basal body rod FlgEFG protein C-terminal A8A54_11775 PF00460 Flagella basal body rod protein A8A54_11780 PF13144 Chaperone for flagella basal body P-ring formation A8A54_11785 PF02119 Flagellar P-ring protein A8A54_11795 PF02107 Flagellar L-ring protein A8A54_11805 PF00813 FliP family A8A54_11810 PF00669 Bacterial flagellin N-terminal helical region A8A54_11810 PF00700 Bacterial flagellin C-terminal helical region A8A54_11815 PF08345 Flagellar M-ring protein C-terminal A8A54_11815 PF01514 Secretory protein of YscJ/FliF family A8A54_11825 PF00691 OmpA family A8A54_11825 PF13677 Membrane MotB of proton-channel complex MotA/MotB A8A54_11835 PF02120 Flagellar hook-length control protein FliK A8A54_11845 PF00486 Transcriptional regulatory protein, C terminal A8A54_11850 PF00460 Flagella basal body rod protein A8A54_11850 PF06429 Flagellar basal body rod FlgEFG protein C-terminal A8A54_11850 PF07559 Flagellar basal body protein FlaE A8A54_11870 PF07378 Flagellar protein FlbT A8A54_11875 PF03963 Flagellar hook capping protein - N-terminal region A8A54_11880 PF01313 Bacterial export proteins, family 3 A8A54_11885 PF00771 FHIPEP family A8A54_11920 PF01475 Ferric uptake regulator family A8A54_11925 PF00950 ABC 3 transport family A8A54_11930 PF00005 ABC transporter A8A54_11935 PF01297 Zinc-uptake complex component A periplasmic A8A54_11940 PF02492 CobW/HypB/UreG, nucleotide-binding domain A8A54_11940 PF07683 Cobalamin synthesis protein cobW C-terminal domain A8A54_11945 PF02082 Transcriptional regulator A8A54_12010 PF00512 His Kinase A (phospho-acceptor) domain A8A54_12010 PF13188 PAS domain A8A54_12010 PF00072 Response regulator receiver domain A8A54_12010 PF08448 PAS fold A8A54_12010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A8A54_12015 PF00196 Bacterial regulatory proteins, luxR family A8A54_12015 PF00072 Response regulator receiver domain A8A54_12020 PF03797 Autotransporter beta-domain A8A54_12030 PF00596 Class II Aldolase and Adducin N-terminal domain A8A54_12040 PF07729 FCD domain A8A54_12040 PF00392 Bacterial regulatory proteins, gntR family A8A54_12045 PF00202 Aminotransferase class-III A8A54_12050 PF08402 TOBE domain A8A54_12050 PF00005 ABC transporter A8A54_12055 PF00528 Binding-protein-dependent transport system inner membrane component A8A54_12070 PF07729 FCD domain A8A54_12070 PF00392 Bacterial regulatory proteins, gntR family A8A54_12075 PF18317 Shikimate 5'-dehydrogenase C-terminal domain A8A54_12075 PF08501 Shikimate dehydrogenase substrate binding domain A8A54_12075 PF01488 Shikimate / quinate 5-dehydrogenase A8A54_12080 PF00441 Acyl-CoA dehydrogenase, C-terminal domain A8A54_12080 PF02770 Acyl-CoA dehydrogenase, middle domain A8A54_12080 PF02771 Acyl-CoA dehydrogenase, N-terminal domain A8A54_12085 PF00378 Enoyl-CoA hydratase/isomerase A8A54_12090 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain A8A54_12090 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain A8A54_12090 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain A8A54_12095 PF02780 Transketolase, C-terminal domain A8A54_12095 PF02779 Transketolase, pyrimidine binding domain A8A54_12095 PF00364 Biotin-requiring enzyme A8A54_12100 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle A8A54_12105 PF00364 Biotin-requiring enzyme A8A54_12105 PF00561 alpha/beta hydrolase fold A8A54_12110 PF09339 IclR helix-turn-helix domain A8A54_12115 PF00528 Binding-protein-dependent transport system inner membrane component A8A54_12120 PF12911 N-terminal TM domain of oligopeptide transport permease C A8A54_12120 PF00528 Binding-protein-dependent transport system inner membrane component A8A54_12125 PF00005 ABC transporter A8A54_12125 PF08352 Oligopeptide/dipeptide transporter, C-terminal region A8A54_12130 PF08352 Oligopeptide/dipeptide transporter, C-terminal region A8A54_12130 PF00005 ABC transporter A8A54_12135 PF02515 CoA-transferase family III A8A54_12140 PF00171 Aldehyde dehydrogenase family A8A54_12145 PF00108 Thiolase, N-terminal domain A8A54_12145 PF02803 Thiolase, C-terminal domain A8A54_12160 PF00528 Binding-protein-dependent transport system inner membrane component A8A54_12170 PF08352 Oligopeptide/dipeptide transporter, C-terminal region A8A54_12170 PF00005 ABC transporter A8A54_12180 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle A8A54_12185 PF01425 Amidase A8A54_12195 PF02530 Porin subfamily A8A54_12200 PF00480 ROK family A8A54_12205 PF13407 Periplasmic binding protein domain A8A54_12210 PF02653 Branched-chain amino acid transport system / permease component A8A54_12215 PF00005 ABC transporter A8A54_12220 PF01037 Lrp/AsnC ligand binding domain A8A54_12225 PF01266 FAD dependent oxidoreductase A8A54_12235 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain A8A54_12240 PF01116 Fructose-bisphosphate aldolase class-II A8A54_12245 PF02502 Ribose/Galactose Isomerase A8A54_12250 PF00121 Triosephosphate isomerase A8A54_12255 PF00455 DeoR C terminal sensor domain A8A54_12255 PF08220 DeoR-like helix-turn-helix domain A8A54_12260 PF04198 Putative sugar-binding domain A8A54_12265 PF01261 Xylose isomerase-like TIM barrel A8A54_12270 PF01266 FAD dependent oxidoreductase A8A54_12270 PF16901 C-terminal domain of alpha-glycerophosphate oxidase A8A54_12275 PF00370 FGGY family of carbohydrate kinases, N-terminal domain A8A54_12275 PF02782 FGGY family of carbohydrate kinases, C-terminal domain A8A54_12285 PF00005 ABC transporter A8A54_12290 PF02653 Branched-chain amino acid transport system / permease component A8A54_12295 PF13407 Periplasmic binding protein domain A8A54_12300 PF00455 DeoR C terminal sensor domain A8A54_12300 PF08220 DeoR-like helix-turn-helix domain A8A54_12305 PF02782 FGGY family of carbohydrate kinases, C-terminal domain A8A54_12305 PF00370 FGGY family of carbohydrate kinases, N-terminal domain A8A54_12310 PF01266 FAD dependent oxidoreductase A8A54_12310 PF16901 C-terminal domain of alpha-glycerophosphate oxidase A8A54_12325 PF02894 Oxidoreductase family, C-terminal alpha/beta domain A8A54_12325 PF01408 Oxidoreductase family, NAD-binding Rossmann fold A8A54_12330 PF02653 Branched-chain amino acid transport system / permease component A8A54_12335 PF00005 ABC transporter A8A54_12345 PF13407 Periplasmic binding protein domain A8A54_12350 PF16896 Phosphogluconate dehydrogenase (decarboxylating) C-term A8A54_12350 PF10727 Rossmann-like domain A8A54_12355 PF07005 Sugar-binding N-terminal domain A8A54_12355 PF17042 Nucleotide-binding C-terminal domain A8A54_12360 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain A8A54_12360 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain A8A54_12365 PF07729 FCD domain A8A54_12365 PF00392 Bacterial regulatory proteins, gntR family A8A54_12370 PF00356 Bacterial regulatory proteins, lacI family A8A54_12375 PF01408 Oxidoreductase family, NAD-binding Rossmann fold A8A54_12375 PF02894 Oxidoreductase family, C-terminal alpha/beta domain A8A54_12395 PF10282 Lactonase, 7-bladed beta-propeller A8A54_12400 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family A8A54_12400 PF00356 Bacterial regulatory proteins, lacI family A8A54_12405 PF00557 Metallopeptidase family M24 A8A54_12405 PF01321 Creatinase/Prolidase N-terminal domain A8A54_12410 PF02653 Branched-chain amino acid transport system / permease component A8A54_12415 PF02653 Branched-chain amino acid transport system / permease component A8A54_12420 PF00005 ABC transporter A8A54_12425 PF00005 ABC transporter A8A54_12435 PF02515 CoA-transferase family III A8A54_12445 PF00378 Enoyl-CoA hydratase/isomerase A8A54_12450 PF07690 Major Facilitator Superfamily A8A54_12450 PF00083 Sugar (and other) transporter A8A54_12455 PF00465 Iron-containing alcohol dehydrogenase A8A54_12460 PF00171 Aldehyde dehydrogenase family A8A54_12465 PF00120 Glutamine synthetase, catalytic domain A8A54_12475 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component A8A54_12500 PF00528 Binding-protein-dependent transport system inner membrane component A8A54_12505 PF00528 Binding-protein-dependent transport system inner membrane component A8A54_12510 PF00005 ABC transporter A8A54_12515 PF03328 HpcH/HpaI aldolase/citrate lyase family A8A54_12525 PF00392 Bacterial regulatory proteins, gntR family A8A54_12525 PF07729 FCD domain A8A54_12530 PF03737 Aldolase/RraA A8A54_12530 PF00180 Isocitrate/isopropylmalate dehydrogenase A8A54_12540 PF00370 FGGY family of carbohydrate kinases, N-terminal domain A8A54_12540 PF02782 FGGY family of carbohydrate kinases, C-terminal domain A8A54_12545 PF00875 DNA photolyase A8A54_12545 PF03441 FAD binding domain of DNA photolyase A8A54_12560 PF07992 Pyridine nucleotide-disulphide oxidoreductase A8A54_12560 PF00724 NADH:flavin oxidoreductase / NADH oxidase family A8A54_12585 PF03073 TspO/MBR family A8A54_12590 PF12973 ChrR Cupin-like domain A8A54_12595 PF04542 Sigma-70 region 2 A8A54_12595 PF04545 Sigma-70, region 4 A8A54_12600 PF03707 Bacterial signalling protein N terminal repeat A8A54_12600 PF00990 Diguanylate cyclase, GGDEF domain A8A54_12600 PF00563 EAL domain A8A54_12610 PF08281 Sigma-70, region 4 A8A54_12610 PF04542 Sigma-70 region 2 A8A54_12620 PF01047 MarR family A8A54_12630 PF13533 Biotin-lipoyl like A8A54_12635 PF00892 EamA-like transporter family A8A54_12650 PF07660 Secretin and TonB N terminus short domain A8A54_12650 PF07715 TonB-dependent Receptor Plug Domain A8A54_12650 PF00593 TonB dependent receptor A8A54_12655 PF01497 Periplasmic binding protein A8A54_12660 PF01032 FecCD transport family A8A54_12665 PF01032 FecCD transport family A8A54_12670 PF00005 ABC transporter A8A54_12675 PF12833 Helix-turn-helix domain A8A54_12675 PF01965 DJ-1/PfpI family A8A54_12680 PF00106 short chain dehydrogenase A8A54_12690 PF00512 His Kinase A (phospho-acceptor) domain A8A54_12690 PF08521 Two-component sensor kinase N-terminal A8A54_12690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A8A54_12695 PF00072 Response regulator receiver domain A8A54_12695 PF00486 Transcriptional regulatory protein, C terminal A8A54_12710 PF00005 ABC transporter A8A54_12710 PF17912 MalK OB fold domain A8A54_12725 PF00486 Transcriptional regulatory protein, C terminal A8A54_12725 PF00072 Response regulator receiver domain A8A54_12730 PF00672 HAMP domain A8A54_12730 PF00512 His Kinase A (phospho-acceptor) domain A8A54_12730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A8A54_12740 PF00873 AcrB/AcrD/AcrF family A8A54_12745 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion A8A54_12755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A8A54_12755 PF03466 LysR substrate binding domain A8A54_12760 PF08220 DeoR-like helix-turn-helix domain A8A54_12760 PF00455 DeoR C terminal sensor domain A8A54_12770 PF01970 Tripartite tricarboxylate transporter TctA family A8A54_12780 PF03401 Tripartite tricarboxylate transporter family receptor A8A54_12785 PF02954 Bacterial regulatory protein, Fis family A8A54_12785 PF00072 Response regulator receiver domain A8A54_12785 PF00158 Sigma-54 interaction domain A8A54_12790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A8A54_12790 PF00512 His Kinase A (phospho-acceptor) domain A8A54_12790 PF02743 Cache domain A8A54_12795 PF03797 Autotransporter beta-domain A8A54_12795 PF12951 Passenger-associated-transport-repeat A8A54_12795 PF00082 Subtilase family A8A54_12800 PF02632 BioY family A8A54_12805 PF02361 Cobalt transport protein A8A54_12810 PF00005 ABC transporter A8A54_12815 PF01979 Amidohydrolase family A8A54_12820 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle A8A54_12825 PF00528 Binding-protein-dependent transport system inner membrane component A8A54_12835 PF08352 Oligopeptide/dipeptide transporter, C-terminal region A8A54_12835 PF00005 ABC transporter A8A54_12840 PF00005 ABC transporter A8A54_12840 PF08352 Oligopeptide/dipeptide transporter, C-terminal region A8A54_12855 PF03611 PTS system sugar-specific permease component A8A54_12860 PF01408 Oxidoreductase family, NAD-binding Rossmann fold A8A54_12865 PF00676 Dehydrogenase E1 component A8A54_12870 PF02779 Transketolase, pyrimidine binding domain A8A54_12870 PF02780 Transketolase, C-terminal domain A8A54_12875 PF02817 e3 binding domain A8A54_12875 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) A8A54_12875 PF00364 Biotin-requiring enzyme A8A54_12880 PF04198 Putative sugar-binding domain A8A54_12890 PF05524 PEP-utilising enzyme, N-terminal A8A54_12890 PF02896 PEP-utilising enzyme, TIM barrel domain A8A54_12890 PF00391 PEP-utilising enzyme, mobile domain A8A54_12900 PF03612 Sorbitol phosphotransferase enzyme II N-terminus A8A54_12900 PF07663 Sorbitol phosphotransferase enzyme II C-terminus A8A54_12905 PF03608 PTS system enzyme II sorbitol-specific factor A8A54_12920 PF02653 Branched-chain amino acid transport system / permease component A8A54_12925 PF13407 Periplasmic binding protein domain A8A54_12930 PF00005 ABC transporter A8A54_12935 PF02653 Branched-chain amino acid transport system / permease component A8A54_12940 PF00294 pfkB family carbohydrate kinase A8A54_12945 PF04198 Putative sugar-binding domain A8A54_12950 PF00596 Class II Aldolase and Adducin N-terminal domain A8A54_12955 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle A8A54_12960 PF02633 Creatinine amidohydrolase A8A54_12965 PF00842 Alanine racemase, C-terminal domain A8A54_12965 PF01168 Alanine racemase, N-terminal domain A8A54_12975 PF07364 Metallopeptidase family M81 A8A54_12975 PF07171 MlrC C-terminus A8A54_12980 PF01266 FAD dependent oxidoreductase A8A54_13010 PF11799 impB/mucB/samB family C-terminal domain A8A54_13010 PF00817 impB/mucB/samB family A8A54_13015 PF01272 Transcription elongation factor, GreA/GreB, C-term A8A54_13015 PF14760 Rnk N-terminus A8A54_13025 PF00072 Response regulator receiver domain A8A54_13030 PF00072 Response regulator receiver domain A8A54_13030 PF00990 Diguanylate cyclase, GGDEF domain A8A54_13035 PF00471 Ribosomal protein L33 A8A54_13055 PF08461 Ribonuclease R winged-helix domain A8A54_13055 PF00773 RNB domain A8A54_13055 PF17876 Cold shock domain A8A54_13055 PF08206 Ribonuclease B OB domain A8A54_13055 PF00575 S1 RNA binding domain A8A54_13060 PF01396 Topoisomerase DNA binding C4 zinc finger A8A54_13060 PF01131 DNA topoisomerase A8A54_13060 PF01751 Toprim domain A8A54_13060 PF13368 Topoisomerase C-terminal repeat A8A54_13070 PF02481 DNA recombination-mediator protein A A8A54_13070 PF17782 DprA winged helix domain A8A54_13075 PF02660 Glycerol-3-phosphate acyltransferase A8A54_13080 PF01979 Amidohydrolase family A8A54_13085 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain A8A54_13085 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain A8A54_13090 PF18158 Adaptive response protein AidB N-terminal domain A8A54_13090 PF02770 Acyl-CoA dehydrogenase, middle domain A8A54_13090 PF00441 Acyl-CoA dehydrogenase, C-terminal domain A8A54_13095 PF03652 Holliday junction resolvase A8A54_13105 PF02686 Glu-tRNAGln amidotransferase C subunit A8A54_13115 PF01425 Amidase A8A54_13130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A8A54_13130 PF01751 Toprim domain A8A54_13130 PF00986 DNA gyrase B subunit, carboxyl terminus A8A54_13130 PF00204 DNA gyrase B A8A54_13135 PF00892 EamA-like transporter family A8A54_13140 PF03099 Biotin/lipoate A/B protein ligase family A8A54_13145 PF08447 PAS fold A8A54_13145 PF07536 HWE histidine kinase A8A54_13145 PF13426 PAS domain A8A54_13150 PF07886 BA14K-like protein A8A54_13185 PF09924 Uncharacterised conserved protein (DUF2156) A8A54_13185 PF03706 Lysylphosphatidylglycerol synthase TM region A8A54_13190 PF02683 Cytochrome C biogenesis protein transmembrane region A8A54_13195 PF14602 Hexapeptide repeat of succinyl-transferase A8A54_13195 PF12804 MobA-like NTP transferase domain A8A54_13195 PF00132 Bacterial transferase hexapeptide (six repeats) A8A54_13200 PF01380 SIS domain A8A54_13205 PF00270 DEAD/DEAH box helicase A8A54_13205 PF00271 Helicase conserved C-terminal domain A8A54_13205 PF17191 RecG wedge domain A8A54_13210 PF03937 Flavinator of succinate dehydrogenase A8A54_13215 PF00270 DEAD/DEAH box helicase A8A54_13215 PF02559 CarD-like/TRCF domain A8A54_13215 PF17757 UvrB interaction domain A8A54_13215 PF00271 Helicase conserved C-terminal domain A8A54_13215 PF03461 TRCF domain A8A54_13230 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle A8A54_13245 PF01494 FAD binding domain A8A54_13250 PF01066 CDP-alcohol phosphatidyltransferase A8A54_13255 PF00107 Zinc-binding dehydrogenase A8A54_13255 PF08240 Alcohol dehydrogenase GroES-like domain A8A54_13275 PF02608 ABC transporter substrate-binding protein PnrA-like A8A54_13285 PF00210 Ferritin-like domain A8A54_13295 PF03992 Antibiotic biosynthesis monooxygenase A8A54_13300 PF07715 TonB-dependent Receptor Plug Domain A8A54_13300 PF00593 TonB dependent receptor A8A54_13310 PF05171 Haemin-degrading HemS.ChuX domain A8A54_13315 PF01497 Periplasmic binding protein A8A54_13320 PF01032 FecCD transport family A8A54_13325 PF00005 ABC transporter A8A54_13330 PF02082 Transcriptional regulator A8A54_13335 PF04073 Aminoacyl-tRNA editing domain A8A54_13370 PF07690 Major Facilitator Superfamily A8A54_13375 PF07690 Major Facilitator Superfamily A8A54_13380 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region A8A54_13390 PF03466 LysR substrate binding domain A8A54_13390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A8A54_13400 PF00005 ABC transporter A8A54_13410 PF00156 Phosphoribosyl transferase domain A8A54_13415 PF07729 FCD domain A8A54_13415 PF00392 Bacterial regulatory proteins, gntR family A8A54_13420 PF00171 Aldehyde dehydrogenase family A8A54_13430 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle A8A54_13435 PF00528 Binding-protein-dependent transport system inner membrane component A8A54_13445 PF00005 ABC transporter A8A54_13445 PF08352 Oligopeptide/dipeptide transporter, C-terminal region A8A54_13450 PF00005 ABC transporter A8A54_13450 PF08352 Oligopeptide/dipeptide transporter, C-terminal region A8A54_13455 PF01425 Amidase A8A54_13460 PF00929 Exonuclease A8A54_13465 PF05230 MASE2 domain A8A54_13465 PF00990 Diguanylate cyclase, GGDEF domain A8A54_13475 PF00491 Arginase family A8A54_13490 PF00296 Luciferase-like monooxygenase A8A54_13495 PF00296 Luciferase-like monooxygenase A8A54_13500 PF01546 Peptidase family M20/M25/M40 A8A54_13500 PF07687 Peptidase dimerisation domain A8A54_13545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A8A54_13545 PF03466 LysR substrate binding domain A8A54_13555 PF00296 Luciferase-like monooxygenase A8A54_13565 PF00296 Luciferase-like monooxygenase A8A54_13570 PF00005 ABC transporter A8A54_13570 PF08352 Oligopeptide/dipeptide transporter, C-terminal region A8A54_13580 PF00528 Binding-protein-dependent transport system inner membrane component A8A54_13585 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle A8A54_13590 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle A8A54_13595 PF00296 Luciferase-like monooxygenase A8A54_13620 PF01613 Flavin reductase like domain A8A54_13635 PF00005 ABC transporter A8A54_13645 PF05425 Copper resistance protein D A8A54_13650 PF00291 Pyridoxal-phosphate dependent enzyme A8A54_13655 PF02530 Porin subfamily A8A54_13670 PF02082 Transcriptional regulator A8A54_13695 PF03466 LysR substrate binding domain A8A54_13695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A8A54_13720 PF02311 AraC-like ligand binding domain A8A54_13720 PF12833 Helix-turn-helix domain A8A54_13725 PF00857 Isochorismatase family A8A54_13735 PF07969 Amidohydrolase family A8A54_13740 PF00561 alpha/beta hydrolase fold A8A54_13755 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle A8A54_13760 PF00528 Binding-protein-dependent transport system inner membrane component A8A54_13765 PF12911 N-terminal TM domain of oligopeptide transport permease C A8A54_13765 PF00528 Binding-protein-dependent transport system inner membrane component A8A54_13770 PF08352 Oligopeptide/dipeptide transporter, C-terminal region A8A54_13770 PF00005 ABC transporter A8A54_13775 PF08352 Oligopeptide/dipeptide transporter, C-terminal region A8A54_13775 PF00005 ABC transporter A8A54_13785 PF05199 GMC oxidoreductase A8A54_13785 PF00732 GMC oxidoreductase A8A54_13790 PF00034 Cytochrome c A8A54_13790 PF13442 Cytochrome C oxidase, cbb3-type, subunit III A8A54_13795 PF02129 X-Pro dipeptidyl-peptidase (S15 family) A8A54_13795 PF09168 X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal A8A54_13795 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain A8A54_13800 PF00005 ABC transporter A8A54_13800 PF08352 Oligopeptide/dipeptide transporter, C-terminal region A8A54_13810 PF00528 Binding-protein-dependent transport system inner membrane component A8A54_13815 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle A8A54_13825 PF03466 LysR substrate binding domain A8A54_13825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A8A54_13835 PF13409 Glutathione S-transferase, N-terminal domain A8A54_13840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A8A54_13840 PF03466 LysR substrate binding domain A8A54_13845 PF13936 Helix-turn-helix domain A8A54_13845 PF00665 Integrase core domain A8A54_13850 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle A8A54_13855 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle A8A54_13860 PF00528 Binding-protein-dependent transport system inner membrane component A8A54_13865 PF12911 N-terminal TM domain of oligopeptide transport permease C A8A54_13865 PF00528 Binding-protein-dependent transport system inner membrane component A8A54_13870 PF00005 ABC transporter A8A54_13870 PF08352 Oligopeptide/dipeptide transporter, C-terminal region A8A54_13875 PF07992 Pyridine nucleotide-disulphide oxidoreductase A8A54_13885 PF13532 2OG-Fe(II) oxygenase superfamily A8A54_13890 PF01261 Xylose isomerase-like TIM barrel A8A54_13895 PF00596 Class II Aldolase and Adducin N-terminal domain A8A54_13900 PF00455 DeoR C terminal sensor domain A8A54_13900 PF08220 DeoR-like helix-turn-helix domain A8A54_13905 PF13407 Periplasmic binding protein domain A8A54_13910 PF00005 ABC transporter A8A54_13915 PF02653 Branched-chain amino acid transport system / permease component A8A54_13920 PF02653 Branched-chain amino acid transport system / permease component A8A54_13925 PF05336 L-rhamnose mutarotase A8A54_13935 PF07690 Major Facilitator Superfamily A8A54_13940 PF03576 Peptidase family S58 A8A54_13945 PF13491 4TM region of DNA translocase FtsK/SpoIIIE A8A54_13945 PF17854 FtsK alpha domain A8A54_13945 PF09397 Ftsk gamma domain A8A54_13945 PF01580 FtsK/SpoIIIE family A8A54_13960 PF07992 Pyridine nucleotide-disulphide oxidoreductase A8A54_13960 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain A8A54_13965 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) A8A54_13965 PF00364 Biotin-requiring enzyme A8A54_13965 PF02817 e3 binding domain A8A54_13970 PF02779 Transketolase, pyrimidine binding domain A8A54_13970 PF02780 Transketolase, C-terminal domain A8A54_13975 PF00676 Dehydrogenase E1 component A8A54_13975 PF12573 2-oxoisovalerate dehydrogenase E1 alpha subunit N terminal A8A54_13980 PF08173 Membrane bound YbgT-like protein A8A54_13985 PF02322 Cytochrome bd terminal oxidase subunit II A8A54_13990 PF01654 Cytochrome bd terminal oxidase subunit I A8A54_13995 PF00664 ABC transporter transmembrane region A8A54_13995 PF00005 ABC transporter A8A54_14000 PF00005 ABC transporter A8A54_14000 PF00664 ABC transporter transmembrane region A8A54_14015 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) A8A54_14020 PF01899 Na+/H+ ion antiporter subunit A8A54_14025 PF00361 Proton-conducting membrane transporter A8A54_14030 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L A8A54_14035 PF00361 Proton-conducting membrane transporter A8A54_14035 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter A8A54_14035 PF13244 Domain of unknown function (DUF4040) A8A54_14035 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus A8A54_14050 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle A8A54_14060 PF08379 Bacterial transglutaminase-like N-terminal region A8A54_14060 PF01841 Transglutaminase-like superfamily A8A54_14065 PF04168 A predicted alpha-helical domain with a conserved ER motif. A8A54_14065 PF14403 Circularly permuted ATP-grasp type 2 A8A54_14070 PF14403 Circularly permuted ATP-grasp type 2 A8A54_14075 PF00994 Probable molybdopterin binding domain A8A54_14090 PF01183 Glycosyl hydrolases family 25 A8A54_14095 PF04204 Homoserine O-succinyltransferase A8A54_14110 PF07992 Pyridine nucleotide-disulphide oxidoreductase A8A54_14115 PF00375 Sodium:dicarboxylate symporter family A8A54_14120 PF00512 His Kinase A (phospho-acceptor) domain A8A54_14120 PF02743 Cache domain A8A54_14120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A8A54_14125 PF00072 Response regulator receiver domain A8A54_14125 PF02954 Bacterial regulatory protein, Fis family A8A54_14125 PF00158 Sigma-54 interaction domain A8A54_14130 PF00005 ABC transporter A8A54_14135 PF14525 AraC-binding-like domain A8A54_14135 PF12833 Helix-turn-helix domain A8A54_14140 PF07715 TonB-dependent Receptor Plug Domain A8A54_14140 PF00593 TonB dependent receptor A8A54_14145 PF04343 Protein of unknown function, DUF488 A8A54_14150 PF00664 ABC transporter transmembrane region A8A54_14150 PF00005 ABC transporter A8A54_14160 PF07715 TonB-dependent Receptor Plug Domain A8A54_14160 PF00593 TonB dependent receptor A8A54_14165 PF01594 AI-2E family transporter A8A54_14175 PF02653 Branched-chain amino acid transport system / permease component A8A54_14185 PF12399 Branched-chain amino acid ATP-binding cassette transporter A8A54_14185 PF00005 ABC transporter A8A54_14190 PF00005 ABC transporter A8A54_14195 PF01177 Asp/Glu/Hydantoin racemase A8A54_14205 PF00884 Sulfatase A8A54_14205 PF12411 Choline sulfatase enzyme C terminal A8A54_14210 PF04069 Substrate binding domain of ABC-type glycine betaine transport system A8A54_14215 PF03466 LysR substrate binding domain A8A54_14215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A8A54_14225 PF03466 LysR substrate binding domain A8A54_14225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A8A54_14235 PF05661 Protein of unknown function (DUF808) A8A54_14250 PF00929 Exonuclease A8A54_14250 PF02811 PHP domain A8A54_14250 PF14579 Helix-hairpin-helix motif A8A54_14250 PF17657 Bacterial DNA polymerase III alpha subunit finger domain A8A54_14250 PF07733 Bacterial DNA polymerase III alpha NTPase domain A8A54_14265 PF07883 Cupin domain A8A54_14265 PF12833 Helix-turn-helix domain A8A54_14270 PF01297 Zinc-uptake complex component A periplasmic A8A54_14275 PF00005 ABC transporter A8A54_14280 PF00950 ABC 3 transport family A8A54_14285 PF00950 ABC 3 transport family A8A54_14290 PF00005 ABC transporter A8A54_14290 PF17912 MalK OB fold domain A8A54_14305 PF00528 Binding-protein-dependent transport system inner membrane component A8A54_14310 PF00356 Bacterial regulatory proteins, lacI family A8A54_14320 PF00248 Aldo/keto reductase family A8A54_14325 PF01266 FAD dependent oxidoreductase A8A54_14330 PF00497 Bacterial extracellular solute-binding proteins, family 3 A8A54_14335 PF00497 Bacterial extracellular solute-binding proteins, family 3 A8A54_14350 PF02308 MgtC family A8A54_14355 PF13382 Adenine deaminase C-terminal domain A8A54_14355 PF01979 Amidohydrolase family A8A54_14360 PF00144 Beta-lactamase A8A54_14365 PF13416 Bacterial extracellular solute-binding protein A8A54_14370 PF00528 Binding-protein-dependent transport system inner membrane component A8A54_14375 PF00528 Binding-protein-dependent transport system inner membrane component A8A54_14380 PF08402 TOBE domain A8A54_14380 PF00005 ABC transporter A8A54_14385 PF03600 Citrate transporter A8A54_14385 PF02080 TrkA-C domain A8A54_14390 PF01202 Shikimate kinase A8A54_14395 PF00392 Bacterial regulatory proteins, gntR family A8A54_14395 PF07729 FCD domain A8A54_14400 PF02913 FAD linked oxidases, C-terminal domain A8A54_14400 PF01565 FAD binding domain A8A54_14415 PF00860 Permease family A8A54_14425 PF00892 EamA-like transporter family A8A54_14430 PF01063 Amino-transferase class IV A8A54_14440 PF00890 FAD binding domain A8A54_14450 PF00171 Aldehyde dehydrogenase family A8A54_14460 PF00528 Binding-protein-dependent transport system inner membrane component A8A54_14465 PF00005 ABC transporter A8A54_14465 PF09383 NIL domain A8A54_14470 PF03180 NLPA lipoprotein A8A54_14475 PF00155 Aminotransferase class I and II A8A54_14480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A8A54_14480 PF03466 LysR substrate binding domain A8A54_14485 PF00593 TonB dependent receptor A8A54_14485 PF07715 TonB-dependent Receptor Plug Domain A8A54_14490 PF00756 Putative esterase A8A54_14495 PF01497 Periplasmic binding protein A8A54_14500 PF01032 FecCD transport family A8A54_14505 PF01032 FecCD transport family A8A54_14510 PF00005 ABC transporter A8A54_14520 PF12911 N-terminal TM domain of oligopeptide transport permease C A8A54_14520 PF00528 Binding-protein-dependent transport system inner membrane component A8A54_14525 PF00528 Binding-protein-dependent transport system inner membrane component A8A54_14530 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle A8A54_14535 PF08352 Oligopeptide/dipeptide transporter, C-terminal region A8A54_14535 PF00005 ABC transporter A8A54_14545 PF01968 Hydantoinase/oxoprolinase A8A54_14545 PF05378 Hydantoinase/oxoprolinase N-terminal region A8A54_14550 PF00497 Bacterial extracellular solute-binding proteins, family 3 A8A54_14565 PF02541 Ppx/GppA phosphatase family A8A54_14570 PF01728 FtsJ-like methyltransferase A8A54_14575 PF07690 Major Facilitator Superfamily A8A54_14585 PF17912 MalK OB fold domain A8A54_14585 PF00005 ABC transporter A8A54_14600 PF01547 Bacterial extracellular solute-binding protein A8A54_14605 PF00885 6,7-dimethyl-8-ribityllumazine synthase A8A54_14610 PF02634 FdhD/NarQ family A8A54_14635 PF08402 TOBE domain A8A54_14635 PF00005 ABC transporter A8A54_14640 PF01266 FAD dependent oxidoreductase A8A54_14645 PF00080 Copper/zinc superoxide dismutase (SODC) A8A54_14650 PF07732 Multicopper oxidase A8A54_14650 PF00394 Multicopper oxidase A8A54_14650 PF07731 Multicopper oxidase A8A54_14660 PF07690 Major Facilitator Superfamily A8A54_14660 PF00083 Sugar (and other) transporter A8A54_14665 PF02627 Carboxymuconolactone decarboxylase family A8A54_14670 PF00578 AhpC/TSA family A8A54_14675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A8A54_14675 PF03466 LysR substrate binding domain A8A54_14680 PF11972 HTH DNA binding domain A8A54_14680 PF07756 Protein of unknown function (DUF1612) A8A54_14685 PF02894 Oxidoreductase family, C-terminal alpha/beta domain A8A54_14685 PF01408 Oxidoreductase family, NAD-binding Rossmann fold A8A54_14695 PF00294 pfkB family carbohydrate kinase A8A54_14700 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain A8A54_14700 PF00205 Thiamine pyrophosphate enzyme, central domain A8A54_14700 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain A8A54_14705 PF01261 Xylose isomerase-like TIM barrel A8A54_14710 PF04962 KduI/IolB family A8A54_14715 PF00459 Inositol monophosphatase family A8A54_14720 PF08402 TOBE domain A8A54_14720 PF00005 ABC transporter A8A54_14725 PF00528 Binding-protein-dependent transport system inner membrane component A8A54_14735 PF00171 Aldehyde dehydrogenase family A8A54_14735 PF18327 Proline utilization A proline dehydrogenase N-terminal domain A8A54_14735 PF01619 Proline dehydrogenase A8A54_14735 PF14850 DNA-binding domain of Proline dehydrogenase A8A54_14745 PF01037 Lrp/AsnC ligand binding domain A8A54_14750 PF01232 Mannitol dehydrogenase Rossmann domain A8A54_14750 PF08125 Mannitol dehydrogenase C-terminal domain A8A54_14755 PF09375 Imelysin A8A54_14755 PF13473 Cupredoxin-like domain A8A54_14760 PF04261 Dyp-type peroxidase family A8A54_14765 PF13473 Cupredoxin-like domain A8A54_14765 PF09375 Imelysin A8A54_14770 PF03239 Iron permease FTR1 family A8A54_14775 PF04116 Fatty acid hydroxylase superfamily A8A54_14785 PF02347 Glycine cleavage system P-protein A8A54_14790 PF01597 Glycine cleavage H-protein A8A54_14795 PF08669 Glycine cleavage T-protein C-terminal barrel domain A8A54_14795 PF01571 Aminomethyltransferase folate-binding domain A8A54_14800 PF07690 Major Facilitator Superfamily A8A54_14810 PF14759 Reductase C-terminal A8A54_14810 PF07992 Pyridine nucleotide-disulphide oxidoreductase A8A54_14820 PF00005 ABC transporter A8A54_14825 PF00528 Binding-protein-dependent transport system inner membrane component A8A54_14840 PF09084 NMT1/THI5 like A8A54_14850 PF04069 Substrate binding domain of ABC-type glycine betaine transport system A8A54_14855 PF00528 Binding-protein-dependent transport system inner membrane component A8A54_14860 PF00005 ABC transporter A8A54_14860 PF00571 CBS domain A8A54_14870 PF14031 Putative serine dehydratase domain A8A54_14870 PF01168 Alanine racemase, N-terminal domain A8A54_14875 PF01418 Helix-turn-helix domain, rpiR family A8A54_14875 PF01380 SIS domain A8A54_14880 PF00005 ABC transporter A8A54_14880 PF08402 TOBE domain A8A54_14890 PF01547 Bacterial extracellular solute-binding protein A8A54_14895 PF00528 Binding-protein-dependent transport system inner membrane component A8A54_14900 PF00528 Binding-protein-dependent transport system inner membrane component A8A54_14905 PF01042 Endoribonuclease L-PSP A8A54_14910 PF07364 Metallopeptidase family M81 A8A54_14910 PF07171 MlrC C-terminus A8A54_14915 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component A8A54_14925 PF03480 Bacterial extracellular solute-binding protein, family 7 A8A54_14930 PF08240 Alcohol dehydrogenase GroES-like domain A8A54_14930 PF00107 Zinc-binding dehydrogenase A8A54_14935 PF08666 SAF domain A8A54_14935 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus A8A54_14940 PF07729 FCD domain A8A54_14940 PF00392 Bacterial regulatory proteins, gntR family A8A54_14945 PF01232 Mannitol dehydrogenase Rossmann domain A8A54_14945 PF08125 Mannitol dehydrogenase C-terminal domain A8A54_14955 PF07730 Histidine kinase A8A54_14955 PF13492 GAF domain A8A54_14955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A8A54_14960 PF13407 Periplasmic binding protein domain A8A54_14965 PF00005 ABC transporter A8A54_14970 PF02653 Branched-chain amino acid transport system / permease component A8A54_14975 PF02653 Branched-chain amino acid transport system / permease component A8A54_14980 PF08450 SMP-30/Gluconolactonase/LRE-like region A8A54_14985 PF00005 ABC transporter A8A54_14990 PF01032 FecCD transport family A8A54_15010 PF01970 Tripartite tricarboxylate transporter TctA family A8A54_15025 PF02308 MgtC family A8A54_15040 PF13188 PAS domain A8A54_15040 PF00989 PAS fold A8A54_15040 PF13426 PAS domain A8A54_15040 PF00512 His Kinase A (phospho-acceptor) domain A8A54_15040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A8A54_15050 PF00528 Binding-protein-dependent transport system inner membrane component A8A54_15055 PF00528 Binding-protein-dependent transport system inner membrane component A8A54_15060 PF00005 ABC transporter A8A54_15060 PF08402 TOBE domain A8A54_15065 PF13416 Bacterial extracellular solute-binding protein A8A54_15070 PF06114 IrrE N-terminal-like domain A8A54_15070 PF09856 Predicted transcriptional regulator (DUF2083) A8A54_15070 PF01381 Helix-turn-helix A8A54_15075 PF00463 Isocitrate lyase family A8A54_15085 PF01062 Bestrophin, RFP-TM, chloride channel A8A54_15095 PF00905 Penicillin binding protein transpeptidase domain A8A54_15100 PF00120 Glutamine synthetase, catalytic domain A8A54_15105 PF01266 FAD dependent oxidoreductase A8A54_15115 PF13520 Amino acid permease A8A54_15120 PF01638 HxlR-like helix-turn-helix A8A54_15145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A8A54_15145 PF03466 LysR substrate binding domain A8A54_15155 PF07729 FCD domain A8A54_15155 PF00392 Bacterial regulatory proteins, gntR family A8A54_15160 PF07690 Major Facilitator Superfamily A8A54_15165 PF01966 HD domain A8A54_15175 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain A8A54_15175 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain A8A54_15180 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase A8A54_15185 PF00920 Dehydratase family A8A54_15190 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain A8A54_15190 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain A8A54_15205 PF03807 NADP oxidoreductase coenzyme F420-dependent A8A54_15205 PF14748 Pyrroline-5-carboxylate reductase dimerisation A8A54_15210 PF08352 Oligopeptide/dipeptide transporter, C-terminal region A8A54_15210 PF00005 ABC transporter A8A54_15215 PF00005 ABC transporter A8A54_15215 PF08352 Oligopeptide/dipeptide transporter, C-terminal region A8A54_15220 PF12911 N-terminal TM domain of oligopeptide transport permease C A8A54_15220 PF00528 Binding-protein-dependent transport system inner membrane component A8A54_15225 PF00528 Binding-protein-dependent transport system inner membrane component A8A54_15230 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle A8A54_15250 PF01921 tRNA synthetases class I (K) A8A54_15255 PF00561 alpha/beta hydrolase fold A8A54_15265 PF00892 EamA-like transporter family A8A54_15280 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain A8A54_15280 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain A8A54_15280 PF00378 Enoyl-CoA hydratase/isomerase A8A54_15285 PF00108 Thiolase, N-terminal domain A8A54_15285 PF02803 Thiolase, C-terminal domain A8A54_15290 PF02770 Acyl-CoA dehydrogenase, middle domain A8A54_15290 PF02771 Acyl-CoA dehydrogenase, N-terminal domain A8A54_15290 PF12806 Acetyl-CoA dehydrogenase C-terminal like A8A54_15290 PF00441 Acyl-CoA dehydrogenase, C-terminal domain A8A54_15295 PF01613 Flavin reductase like domain A8A54_15300 PF08267 Cobalamin-independent synthase, N-terminal domain A8A54_15300 PF01717 Cobalamin-independent synthase, Catalytic domain A8A54_15310 PF03466 LysR substrate binding domain A8A54_15310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A8A54_15345 PF01925 Sulfite exporter TauE/SafE A8A54_15360 PF00271 Helicase conserved C-terminal domain A8A54_15360 PF08494 DEAD/H associated A8A54_15360 PF00270 DEAD/DEAH box helicase A8A54_15370 PF04679 ATP dependent DNA ligase C terminal region A8A54_15370 PF01068 ATP dependent DNA ligase domain A8A54_15370 PF04675 DNA ligase N terminus A8A54_15445 PF00182 Chitinase class I A8A54_15550 PF00574 Clp protease A8A54_15605 PF14659 Phage integrase, N-terminal SAM-like domain A8A54_15605 PF00589 Phage integrase family A8A54_15615 PF12833 Helix-turn-helix domain A8A54_15620 PF00593 TonB dependent receptor A8A54_15620 PF07715 TonB-dependent Receptor Plug Domain A8A54_15630 PF01546 Peptidase family M20/M25/M40 A8A54_15640 PF00005 ABC transporter A8A54_15640 PF08352 Oligopeptide/dipeptide transporter, C-terminal region A8A54_15645 PF08352 Oligopeptide/dipeptide transporter, C-terminal region A8A54_15645 PF00005 ABC transporter A8A54_15655 PF00528 Binding-protein-dependent transport system inner membrane component A8A54_15660 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle A8A54_15680 PF02782 FGGY family of carbohydrate kinases, C-terminal domain A8A54_15680 PF00370 FGGY family of carbohydrate kinases, N-terminal domain A8A54_15685 PF02627 Carboxymuconolactone decarboxylase family A8A54_15690 PF00561 alpha/beta hydrolase fold A8A54_15690 PF00364 Biotin-requiring enzyme A8A54_15695 PF02780 Transketolase, C-terminal domain A8A54_15695 PF02779 Transketolase, pyrimidine binding domain A8A54_15700 PF00676 Dehydrogenase E1 component A8A54_15705 PF02653 Branched-chain amino acid transport system / permease component A8A54_15710 PF00005 ABC transporter A8A54_15720 PF04198 Putative sugar-binding domain A8A54_15725 PF00202 Aminotransferase class-III A8A54_15730 PF00528 Binding-protein-dependent transport system inner membrane component A8A54_15735 PF01266 FAD dependent oxidoreductase A8A54_15735 PF00355 Rieske [2Fe-2S] domain A8A54_15740 PF00497 Bacterial extracellular solute-binding proteins, family 3 A8A54_15745 PF00005 ABC transporter A8A54_15750 PF00171 Aldehyde dehydrogenase family A8A54_15760 PF00455 DeoR C terminal sensor domain A8A54_15760 PF08220 DeoR-like helix-turn-helix domain A8A54_15775 PF00724 NADH:flavin oxidoreductase / NADH oxidase family A8A54_15775 PF07992 Pyridine nucleotide-disulphide oxidoreductase A8A54_15780 PF00528 Binding-protein-dependent transport system inner membrane component A8A54_15785 PF00528 Binding-protein-dependent transport system inner membrane component A8A54_15790 PF00497 Bacterial extracellular solute-binding proteins, family 3 A8A54_15795 PF00005 ABC transporter A8A54_15800 PF13977 BetI-type transcriptional repressor, C-terminal A8A54_15800 PF00440 Bacterial regulatory proteins, tetR family A8A54_15820 PF12951 Passenger-associated-transport-repeat A8A54_15830 PF00155 Aminotransferase class I and II A8A54_15830 PF00392 Bacterial regulatory proteins, gntR family A8A54_15835 PF04069 Substrate binding domain of ABC-type glycine betaine transport system A8A54_15840 PF00005 ABC transporter A8A54_15845 PF00528 Binding-protein-dependent transport system inner membrane component A8A54_15860 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain A8A54_15860 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain A8A54_15860 PF00205 Thiamine pyrophosphate enzyme, central domain A8A54_15865 PF01515 Phosphate acetyl/butaryl transferase A8A54_15890 PF01497 Periplasmic binding protein A8A54_15895 PF00171 Aldehyde dehydrogenase family A8A54_15900 PF02615 Malate/L-lactate dehydrogenase A8A54_15905 PF00701 Dihydrodipicolinate synthetase family A8A54_15910 PF00392 Bacterial regulatory proteins, gntR family A8A54_15910 PF07729 FCD domain A8A54_15915 PF01321 Creatinase/Prolidase N-terminal domain A8A54_15915 PF00557 Metallopeptidase family M24 A8A54_15920 PF00528 Binding-protein-dependent transport system inner membrane component A8A54_15930 PF00005 ABC transporter A8A54_15930 PF08402 TOBE domain A8A54_15945 PF00577 Outer membrane usher protein A8A54_15945 PF13954 PapC N-terminal domain A8A54_15945 PF13953 PapC C-terminal domain A8A54_15960 PF01297 Zinc-uptake complex component A periplasmic A8A54_15965 PF00950 ABC 3 transport family A8A54_15970 PF00005 ABC transporter A8A54_15980 PF00144 Beta-lactamase A8A54_15985 PF12951 Passenger-associated-transport-repeat A8A54_15990 PF00202 Aminotransferase class-III A8A54_15995 PF00171 Aldehyde dehydrogenase family A8A54_16000 PF01037 Lrp/AsnC ligand binding domain A8A54_16005 PF00291 Pyridoxal-phosphate dependent enzyme A8A54_16010 PF02423 Ornithine cyclodeaminase/mu-crystallin family A8A54_16015 PF00557 Metallopeptidase family M24 A8A54_16015 PF01321 Creatinase/Prolidase N-terminal domain A8A54_16020 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family A8A54_16025 PF00497 Bacterial extracellular solute-binding proteins, family 3 A8A54_16030 PF00528 Binding-protein-dependent transport system inner membrane component A8A54_16035 PF00528 Binding-protein-dependent transport system inner membrane component A8A54_16040 PF00005 ABC transporter A8A54_16045 PF00155 Aminotransferase class I and II A8A54_16045 PF00392 Bacterial regulatory proteins, gntR family A8A54_16050 PF01266 FAD dependent oxidoreductase A8A54_16055 PF07992 Pyridine nucleotide-disulphide oxidoreductase A8A54_16055 PF04324 BFD-like [2Fe-2S] binding domain A8A54_16070 PF00378 Enoyl-CoA hydratase/isomerase A8A54_16080 PF08402 TOBE domain A8A54_16080 PF00005 ABC transporter A8A54_16085 PF00528 Binding-protein-dependent transport system inner membrane component A8A54_16090 PF00501 AMP-binding enzyme A8A54_16090 PF13193 AMP-binding enzyme C-terminal domain A8A54_16100 PF00440 Bacterial regulatory proteins, tetR family A8A54_16100 PF17934 Tetracyclin repressor-like, C-terminal domain A8A54_16105 PF03167 Uracil DNA glycosylase superfamily A8A54_16110 PF00732 GMC oxidoreductase A8A54_16110 PF05199 GMC oxidoreductase A8A54_16120 PF02608 ABC transporter substrate-binding protein PnrA-like A8A54_16125 PF00005 ABC transporter A8A54_16140 PF01979 Amidohydrolase family A8A54_16145 PF08240 Alcohol dehydrogenase GroES-like domain A8A54_16145 PF00107 Zinc-binding dehydrogenase A8A54_16155 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase A8A54_16155 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase A8A54_16160 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain A8A54_16160 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain A8A54_16165 PF00005 ABC transporter A8A54_16170 PF00528 Binding-protein-dependent transport system inner membrane component A8A54_16175 PF00528 Binding-protein-dependent transport system inner membrane component A8A54_16180 PF00497 Bacterial extracellular solute-binding proteins, family 3 A8A54_16190 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family A8A54_16190 PF00356 Bacterial regulatory proteins, lacI family A8A54_16200 PF00465 Iron-containing alcohol dehydrogenase A8A54_16210 PF13419 Haloacid dehalogenase-like hydrolase A8A54_16215 PF02782 FGGY family of carbohydrate kinases, C-terminal domain A8A54_16215 PF00370 FGGY family of carbohydrate kinases, N-terminal domain A8A54_16220 PF02653 Branched-chain amino acid transport system / permease component A8A54_16225 PF00005 ABC transporter A8A54_16230 PF13407 Periplasmic binding protein domain A8A54_16235 PF06560 Glucose-6-phosphate isomerase (GPI) A8A54_16240 PF01081 KDPG and KHG aldolase A8A54_16250 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain A8A54_16250 PF01842 ACT domain A8A54_16250 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain A8A54_16260 PF01380 SIS domain A8A54_16260 PF01418 Helix-turn-helix domain, rpiR family A8A54_16270 PF02653 Branched-chain amino acid transport system / permease component A8A54_16275 PF00005 ABC transporter A8A54_16280 PF02653 Branched-chain amino acid transport system / permease component A8A54_16285 PF13407 Periplasmic binding protein domain A8A54_16290 PF00356 Bacterial regulatory proteins, lacI family A8A54_16300 PF01804 Penicillin amidase A8A54_16305 PF07687 Peptidase dimerisation domain A8A54_16305 PF01546 Peptidase family M20/M25/M40 A8A54_16310 PF07687 Peptidase dimerisation domain A8A54_16310 PF01546 Peptidase family M20/M25/M40 A8A54_16315 PF08352 Oligopeptide/dipeptide transporter, C-terminal region A8A54_16315 PF00005 ABC transporter A8A54_16320 PF00528 Binding-protein-dependent transport system inner membrane component A8A54_16325 PF00528 Binding-protein-dependent transport system inner membrane component A8A54_16330 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle A8A54_16345 PF00083 Sugar (and other) transporter A8A54_16350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A8A54_16350 PF00512 His Kinase A (phospho-acceptor) domain A8A54_16355 PF00158 Sigma-54 interaction domain A8A54_16355 PF00072 Response regulator receiver domain A8A54_16355 PF02954 Bacterial regulatory protein, Fis family A8A54_16360 PF00356 Bacterial regulatory proteins, lacI family A8A54_16365 PF00005 ABC transporter A8A54_16365 PF08402 TOBE domain A8A54_16370 PF05378 Hydantoinase/oxoprolinase N-terminal region A8A54_16370 PF01968 Hydantoinase/oxoprolinase A8A54_16375 PF02538 Hydantoinase B/oxoprolinase A8A54_16385 PF00528 Binding-protein-dependent transport system inner membrane component A8A54_16390 PF00528 Binding-protein-dependent transport system inner membrane component A8A54_16400 PF01266 FAD dependent oxidoreductase A8A54_16410 PF01979 Amidohydrolase family A8A54_16415 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle A8A54_16425 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle A8A54_16430 PF00528 Binding-protein-dependent transport system inner membrane component A8A54_16435 PF00528 Binding-protein-dependent transport system inner membrane component A8A54_16435 PF12911 N-terminal TM domain of oligopeptide transport permease C A8A54_16445 PF01522 Polysaccharide deacetylase A8A54_16455 PF08352 Oligopeptide/dipeptide transporter, C-terminal region A8A54_16455 PF00005 ABC transporter A8A54_16460 PF00005 ABC transporter A8A54_16460 PF08352 Oligopeptide/dipeptide transporter, C-terminal region A8A54_16470 PF08028 Acyl-CoA dehydrogenase, C-terminal domain A8A54_16470 PF02771 Acyl-CoA dehydrogenase, N-terminal domain A8A54_16470 PF02770 Acyl-CoA dehydrogenase, middle domain A8A54_16475 PF00109 Beta-ketoacyl synthase, N-terminal domain A8A54_16475 PF02801 Beta-ketoacyl synthase, C-terminal domain A8A54_16475 PF08659 KR domain A8A54_16475 PF00550 Phosphopantetheine attachment site A8A54_16475 PF14765 Polyketide synthase dehydratase A8A54_16475 PF16197 Ketoacyl-synthetase C-terminal extension A8A54_16475 PF08240 Alcohol dehydrogenase GroES-like domain A8A54_16475 PF00698 Acyl transferase domain A8A54_16485 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle A8A54_16490 PF00005 ABC transporter A8A54_16490 PF08352 Oligopeptide/dipeptide transporter, C-terminal region A8A54_16495 PF00528 Binding-protein-dependent transport system inner membrane component A8A54_16495 PF12911 N-terminal TM domain of oligopeptide transport permease C A8A54_16500 PF00528 Binding-protein-dependent transport system inner membrane component A8A54_16505 PF02734 DAK2 domain A8A54_16510 PF02733 Dak1 domain A8A54_16515 PF02734 DAK2 domain A8A54_16520 PF02733 Dak1 domain A8A54_16530 PF13407 Periplasmic binding protein domain A8A54_16535 PF02653 Branched-chain amino acid transport system / permease component A8A54_16540 PF00005 ABC transporter A8A54_16545 PF14497 Glutathione S-transferase, C-terminal domain A8A54_16545 PF02798 Glutathione S-transferase, N-terminal domain A8A54_16580 PF01551 Peptidase family M23 A8A54_16580 PF04225 Opacity-associated protein A LysM-like domain A8A54_16585 PF03734 L,D-transpeptidase catalytic domain A8A54_16585 PF01476 LysM domain A8A54_16590 PF07724 AAA domain (Cdc48 subfamily) A8A54_16590 PF10431 C-terminal, D2-small domain, of ClpB protein A8A54_16590 PF02861 Clp amino terminal domain, pathogenicity island component A8A54_16590 PF00004 ATPase family associated with various cellular activities (AAA) A8A54_16590 PF17871 AAA lid domain A8A54_16600 PF17827 PrmC N-terminal domain A8A54_16600 PF05175 Methyltransferase small domain A8A54_16605 PF00472 RF-1 domain A8A54_16605 PF03462 PCRF domain A8A54_16610 PF05524 PEP-utilising enzyme, N-terminal A8A54_16610 PF01590 GAF domain A8A54_16610 PF02896 PEP-utilising enzyme, TIM barrel domain A8A54_16610 PF00391 PEP-utilising enzyme, mobile domain A8A54_16615 PF13840 ACT domain A8A54_16615 PF00696 Amino acid kinase family A8A54_16615 PF01842 ACT domain A8A54_16635 PF00795 Carbon-nitrogen hydrolase A8A54_16640 PF00462 Glutaredoxin A8A54_16645 PF00156 Phosphoribosyl transferase domain A8A54_16660 PF00293 NUDIX domain A8A54_16670 PF01960 ArgJ family A8A54_16675 PF00639 PPIC-type PPIASE domain A8A54_16680 PF07516 SecA Wing and Scaffold domain A8A54_16680 PF01043 SecA preprotein cross-linking domain A8A54_16680 PF07517 SecA DEAD-like domain A8A54_16680 PF02810 SEC-C motif A8A54_16700 PF01053 Cys/Met metabolism PLP-dependent enzyme A8A54_16705 PF00582 Universal stress protein family A8A54_16710 PF00291 Pyridoxal-phosphate dependent enzyme A8A54_16715 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain A8A54_16715 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain A8A54_16720 PF00766 Electron transfer flavoprotein FAD-binding domain A8A54_16720 PF01012 Electron transfer flavoprotein domain A8A54_16725 PF01012 Electron transfer flavoprotein domain A8A54_16730 PF06508 Queuosine biosynthesis protein QueC A8A54_16735 PF01242 6-pyruvoyl tetrahydropterin synthase A8A54_16740 PF04055 Radical SAM superfamily A8A54_16745 PF01923 Cobalamin adenosyltransferase A8A54_16755 PF00106 short chain dehydrogenase A8A54_16765 PF00892 EamA-like transporter family A8A54_16770 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 A8A54_16775 PF01810 LysE type translocator A8A54_16780 PF08534 Redoxin A8A54_16785 PF14698 Argininosuccinate lyase C-terminal A8A54_16785 PF00206 Lyase A8A54_16795 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain A8A54_16795 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain A8A54_16810 PF01209 ubiE/COQ5 methyltransferase family A8A54_16815 PF00155 Aminotransferase class I and II A8A54_16820 PF02153 Prephenate dehydrogenase A8A54_16845 PF02325 YGGT family A8A54_16850 PF00719 Inorganic pyrophosphatase A8A54_16870 PF00005 ABC transporter A8A54_16880 PF00230 Major intrinsic protein A8A54_16910 PF03900 Porphobilinogen deaminase, C-terminal domain A8A54_16910 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain A8A54_16915 PF00814 Glycoprotease family A8A54_16920 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus A8A54_16920 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus A8A54_16940 PF00892 EamA-like transporter family A8A54_16945 PF00392 Bacterial regulatory proteins, gntR family A8A54_16945 PF00155 Aminotransferase class I and II A8A54_16950 PF00860 Permease family A8A54_16960 PF00072 Response regulator receiver domain A8A54_16960 PF00486 Transcriptional regulatory protein, C terminal A8A54_16980 PF03548 Outer membrane lipoprotein carrier protein LolA A8A54_16985 PF01580 FtsK/SpoIIIE family A8A54_16985 PF09397 Ftsk gamma domain A8A54_16985 PF13491 4TM region of DNA translocase FtsK/SpoIIIE A8A54_16985 PF17854 FtsK alpha domain A8A54_16990 PF00909 Ammonium Transporter Family A8A54_17000 PF01494 FAD binding domain A8A54_17010 PF02566 OsmC-like protein A8A54_17020 PF13085 2Fe-2S iron-sulfur cluster binding domain A8A54_17020 PF13237 4Fe-4S dicluster domain A8A54_17025 PF00890 FAD binding domain A8A54_17025 PF02910 Fumarate reductase flavoprotein C-term A8A54_17035 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit A8A54_17045 PF00990 Diguanylate cyclase, GGDEF domain A8A54_17045 PF00072 Response regulator receiver domain A8A54_17050 PF00330 Aconitase family (aconitate hydratase) A8A54_17060 PF01245 Ribosomal protein L19 A8A54_17070 PF01746 tRNA (Guanine-1)-methyltransferase A8A54_17075 PF05239 PRC-barrel domain A8A54_17075 PF01782 RimM N-terminal domain A8A54_17080 PF00589 Phage integrase family A8A54_17080 PF02899 Phage integrase, N-terminal SAM-like domain A8A54_17095 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain A8A54_17095 PF07992 Pyridine nucleotide-disulphide oxidoreductase A8A54_17105 PF01810 LysE type translocator A8A54_17115 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) A8A54_17115 PF00364 Biotin-requiring enzyme A8A54_17115 PF02817 e3 binding domain A8A54_17120 PF16078 2-oxoglutarate dehydrogenase N-terminus A8A54_17120 PF16870 2-oxoglutarate dehydrogenase C-terminal A8A54_17120 PF02779 Transketolase, pyrimidine binding domain A8A54_17120 PF00676 Dehydrogenase E1 component A8A54_17125 PF00549 CoA-ligase A8A54_17125 PF02629 CoA binding domain A8A54_17130 PF00549 CoA-ligase A8A54_17130 PF08442 ATP-grasp domain A8A54_17135 PF00056 lactate/malate dehydrogenase, NAD binding domain A8A54_17135 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain A8A54_17140 PF03969 AFG1-like ATPase A8A54_17145 PF02974 Protease inhibitor Inh A8A54_17150 PF01678 Diaminopimelate epimerase A8A54_17155 PF04055 Radical SAM superfamily A8A54_17155 PF00919 Uncharacterized protein family UPF0004 A8A54_17160 PF02881 SRP54-type protein, helical bundle domain A8A54_17160 PF00448 SRP54-type protein, GTPase domain A8A54_17165 PF04279 Intracellular septation protein A A8A54_17170 PF00753 Metallo-beta-lactamase superfamily A8A54_17170 PF16123 Hydroxyacylglutathione hydrolase C-terminus A8A54_17180 PF00403 Heavy-metal-associated domain A8A54_17185 PF13411 MerR HTH family regulatory protein A8A54_17195 PF00830 Ribosomal L28 family A8A54_17200 PF02592 Putative vitamin uptake transporter A8A54_17205 PF00106 short chain dehydrogenase A8A54_17210 PF11775 Cobalamin biosynthesis protein CobT VWA domain A8A54_17210 PF06213 Cobalamin biosynthesis protein CobT A8A54_17215 PF07728 AAA domain (dynein-related subfamily) A8A54_17215 PF12556 Cobaltochelatase CobS subunit N terminal A8A54_17215 PF08406 CbbQ/NirQ/NorQ C-terminal A8A54_17220 PF00226 DnaJ domain A8A54_17225 PF01722 BolA-like protein A8A54_17235 PF00571 CBS domain A8A54_17235 PF03471 Transporter associated domain A8A54_17235 PF01595 Cyclin M transmembrane N-terminal domain A8A54_17240 PF01761 3-dehydroquinate synthase A8A54_17245 PF01202 Shikimate kinase A8A54_17255 PF00589 Phage integrase family A8A54_17255 PF02899 Phage integrase, N-terminal SAM-like domain A8A54_17260 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit A8A54_17265 PF03734 L,D-transpeptidase catalytic domain A8A54_17270 PF01206 Sulfurtransferase TusA A8A54_17275 PF07683 Cobalamin synthesis protein cobW C-terminal domain A8A54_17275 PF02492 CobW/HypB/UreG, nucleotide-binding domain A8A54_17280 PF00768 D-alanyl-D-alanine carboxypeptidase A8A54_17280 PF07943 Penicillin-binding protein 5, C-terminal domain A8A54_17285 PF07687 Peptidase dimerisation domain A8A54_17285 PF01546 Peptidase family M20/M25/M40 A8A54_17295 PF07690 Major Facilitator Superfamily A8A54_17310 PF00732 GMC oxidoreductase A8A54_17310 PF05199 GMC oxidoreductase A8A54_17320 PF00732 GMC oxidoreductase A8A54_17320 PF05199 GMC oxidoreductase A8A54_17325 PF00171 Aldehyde dehydrogenase family A8A54_17330 PF00378 Enoyl-CoA hydratase/isomerase A8A54_17335 PF01144 Coenzyme A transferase A8A54_17340 PF02894 Oxidoreductase family, C-terminal alpha/beta domain A8A54_17340 PF01408 Oxidoreductase family, NAD-binding Rossmann fold A8A54_17345 PF00356 Bacterial regulatory proteins, lacI family A8A54_17345 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family A8A54_17360 PF00296 Luciferase-like monooxygenase A8A54_17380 PF02653 Branched-chain amino acid transport system / permease component A8A54_17385 PF00005 ABC transporter A8A54_17400 PF17762 HTH domain found in ParB protein A8A54_17400 PF02195 ParB-like nuclease domain A8A54_17405 PF13614 AAA domain A8A54_17410 PF02527 rRNA small subunit methyltransferase G A8A54_17415 PF01134 Glucose inhibited division protein A A8A54_17415 PF13932 GidA associated domain A8A54_17425 PF01926 50S ribosome-binding GTPase A8A54_17425 PF12631 MnmE helical domain A8A54_17425 PF10396 GTP-binding protein TrmE N-terminus A8A54_17430 PF03190 Protein of unknown function, DUF255 A8A54_17435 PF07497 Rho termination factor, RNA-binding domain A8A54_17435 PF07498 Rho termination factor, N-terminal domain A8A54_17435 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain A8A54_17445 PF01208 Uroporphyrinogen decarboxylase (URO-D) A8A54_17450 PF03618 Kinase/pyrophosphorylase A8A54_17455 PF02545 Maf-like protein A8A54_17460 PF18317 Shikimate 5'-dehydrogenase C-terminal domain A8A54_17460 PF08501 Shikimate dehydrogenase substrate binding domain A8A54_17460 PF01488 Shikimate / quinate 5-dehydrogenase A8A54_17465 PF01121 Dephospho-CoA kinase A8A54_17470 PF00929 Exonuclease A8A54_17475 PF02556 Preprotein translocase subunit SecB A8A54_17480 PF04186 FxsA cytoplasmic membrane protein A8A54_17490 PF03562 MltA specific insert domain A8A54_17490 PF06725 3D domain A8A54_17505 PF01757 Acyltransferase family A8A54_17515 PF10431 C-terminal, D2-small domain, of ClpB protein A8A54_17515 PF07724 AAA domain (Cdc48 subfamily) A8A54_17515 PF00004 ATPase family associated with various cellular activities (AAA) A8A54_17520 PF10755 Protein of unknown function (DUF2585) A8A54_17525 PF00227 Proteasome subunit A8A54_17530 PF00475 Imidazoleglycerol-phosphate dehydratase A8A54_17540 PF00117 Glutamine amidotransferase class-I A8A54_17545 PF00977 Histidine biosynthesis protein A8A54_17550 PF00977 Histidine biosynthesis protein A8A54_17555 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase A8A54_17560 PF00485 Phosphoribulokinase / Uridine kinase family A8A54_17565 PF02567 Phenazine biosynthesis-like protein A8A54_17570 PF04972 BON domain A8A54_17570 PF01476 LysM domain A8A54_17575 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain A8A54_17575 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain A8A54_17575 PF00205 Thiamine pyrophosphate enzyme, central domain A8A54_17580 PF00561 alpha/beta hydrolase fold A8A54_17585 PF00472 RF-1 domain A8A54_17590 PF01293 Phosphoenolpyruvate carboxykinase A8A54_17595 PF00486 Transcriptional regulatory protein, C terminal A8A54_17595 PF00072 Response regulator receiver domain A8A54_17600 PF00512 His Kinase A (phospho-acceptor) domain A8A54_17600 PF00672 HAMP domain A8A54_17600 PF13756 Stimulus-sensing domain A8A54_17600 PF13755 Sensor N-terminal transmembrane domain A8A54_17600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A8A54_17605 PF07475 HPr Serine kinase C-terminal domain A8A54_17605 PF02603 HPr Serine kinase N terminus A8A54_17610 PF03830 PTS system sorbose subfamily IIB component A8A54_17610 PF03610 PTS system fructose IIA component A8A54_17615 PF00381 PTS HPr component phosphorylation site A8A54_17620 PF05221 S-adenosyl-L-homocysteine hydrolase A8A54_17620 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain A8A54_17625 PF00512 His Kinase A (phospho-acceptor) domain A8A54_17625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A8A54_17630 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE A8A54_17635 PF12804 MobA-like NTP transferase domain A8A54_17640 PF12705 PD-(D/E)XK nuclease superfamily A8A54_17645 PF00580 UvrD/REP helicase N-terminal domain A8A54_17645 PF12705 PD-(D/E)XK nuclease superfamily A8A54_17645 PF13361 UvrD-like helicase C-terminal domain A8A54_17650 PF00085 Thioredoxin A8A54_17655 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle A8A54_17660 PF00005 ABC transporter A8A54_17660 PF08352 Oligopeptide/dipeptide transporter, C-terminal region A8A54_17665 PF08352 Oligopeptide/dipeptide transporter, C-terminal region A8A54_17665 PF00005 ABC transporter A8A54_17670 PF00528 Binding-protein-dependent transport system inner membrane component A8A54_17675 PF12911 N-terminal TM domain of oligopeptide transport permease C A8A54_17675 PF00528 Binding-protein-dependent transport system inner membrane component A8A54_17680 PF03009 Glycerophosphoryl diester phosphodiesterase family A8A54_17690 PF00392 Bacterial regulatory proteins, gntR family A8A54_17690 PF07729 FCD domain A8A54_17695 PF00701 Dihydrodipicolinate synthetase family A8A54_17705 PF00005 ABC transporter A8A54_17705 PF08402 TOBE domain A8A54_17710 PF00528 Binding-protein-dependent transport system inner membrane component A8A54_17715 PF00528 Binding-protein-dependent transport system inner membrane component A8A54_17720 PF13378 Enolase C-terminal domain-like A8A54_17720 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain A8A54_17730 PF01370 NAD dependent epimerase/dehydratase family A8A54_17735 PF01263 Aldose 1-epimerase A8A54_17740 PF00920 Dehydratase family A8A54_17745 PF03737 Aldolase/RraA A8A54_17750 PF08245 Mur ligase middle domain A8A54_17755 PF01039 Carboxyl transferase domain A8A54_17760 PF00290 Tryptophan synthase alpha chain A8A54_17770 PF00291 Pyridoxal-phosphate dependent enzyme A8A54_17775 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase A8A54_17795 PF03594 Benzoate membrane transport protein A8A54_17805 PF00707 Translation initiation factor IF-3, C-terminal domain A8A54_17805 PF05198 Translation initiation factor IF-3, N-terminal domain A8A54_17810 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family A8A54_17815 PF01632 Ribosomal protein L35 A8A54_17820 PF00453 Ribosomal protein L20 A8A54_17825 PF01409 tRNA synthetases class II core domain (F) A8A54_17825 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain A8A54_17835 PF03147 Ferredoxin-fold anticodon binding domain A8A54_17835 PF03483 B3/4 domain A8A54_17835 PF03484 tRNA synthetase B5 domain A8A54_17835 PF01588 Putative tRNA binding domain A8A54_17835 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain A8A54_17850 PF07690 Major Facilitator Superfamily A8A54_17865 PF00248 Aldo/keto reductase family A8A54_17870 PF03466 LysR substrate binding domain A8A54_17870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A8A54_17880 PF02894 Oxidoreductase family, C-terminal alpha/beta domain A8A54_17880 PF01408 Oxidoreductase family, NAD-binding Rossmann fold A8A54_17885 PF00012 Hsp70 protein A8A54_17890 PF01556 DnaJ C terminal domain A8A54_17890 PF00226 DnaJ domain A8A54_17890 PF00684 DnaJ central domain A8A54_17895 PF13649 Methyltransferase domain A8A54_17900 PF03358 NADPH-dependent FMN reductase A8A54_17905 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family A8A54_17915 PF08450 SMP-30/Gluconolactonase/LRE-like region A8A54_17920 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain A8A54_17920 PF02951 Prokaryotic glutathione synthetase, N-terminal domain A8A54_17925 PF13335 Magnesium chelatase, subunit ChlI C-terminal A8A54_17925 PF01078 Magnesium chelatase, subunit ChlI A8A54_17930 PF00772 DnaB-like helicase N terminal domain A8A54_17930 PF03796 DnaB-like helicase C terminal domain A8A54_17940 PF03330 Lytic transglycolase A8A54_17950 PF04304 Protein of unknown function (DUF454) A8A54_17955 PF00155 Aminotransferase class I and II A8A54_17965 PF00528 Binding-protein-dependent transport system inner membrane component A8A54_17970 PF00528 Binding-protein-dependent transport system inner membrane component A8A54_17975 PF00005 ABC transporter A8A54_17980 PF01895 PhoU domain A8A54_17985 PF00072 Response regulator receiver domain A8A54_17985 PF00486 Transcriptional regulatory protein, C terminal A8A54_17990 PF07486 Cell Wall Hydrolase A8A54_18000 PF02073 Thermophilic metalloprotease (M29) A8A54_18010 PF00210 Ferritin-like domain A8A54_18015 PF00814 Glycoprotease family A8A54_18020 PF00583 Acetyltransferase (GNAT) family A8A54_18025 PF01553 Acyltransferase A8A54_18030 PF00919 Uncharacterized protein family UPF0004 A8A54_18030 PF01938 TRAM domain A8A54_18030 PF04055 Radical SAM superfamily A8A54_18035 PF02562 PhoH-like protein A8A54_18040 PF02130 Uncharacterized protein family UPF0054 A8A54_18045 PF00571 CBS domain A8A54_18045 PF03471 Transporter associated domain A8A54_18050 PF00795 Carbon-nitrogen hydrolase A8A54_18055 PF01381 Helix-turn-helix A8A54_18060 PF02773 S-adenosylmethionine synthetase, C-terminal domain A8A54_18060 PF02772 S-adenosylmethionine synthetase, central domain A8A54_18060 PF00438 S-adenosylmethionine synthetase, N-terminal domain A8A54_18065 PF02390 Putative methyltransferase A8A54_18070 PF17384 RimP C-terminal SH3 domain A8A54_18070 PF02576 RimP N-terminal domain A8A54_18075 PF08529 NusA N-terminal domain A8A54_18075 PF00575 S1 RNA binding domain A8A54_18075 PF13184 NusA-like KH domain A8A54_18085 PF04760 Translation initiation factor IF-2, N-terminal region A8A54_18085 PF08364 Bacterial translation initiation factor IF-2 associated region A8A54_18085 PF11987 Translation-initiation factor 2 A8A54_18085 PF00009 Elongation factor Tu GTP binding domain A8A54_18090 PF02033 Ribosome-binding factor A A8A54_18095 PF16198 tRNA pseudouridylate synthase B C-terminal domain A8A54_18095 PF09157 Pseudouridine synthase II TruB, C-terminal A8A54_18095 PF01509 TruB family pseudouridylate synthase (N terminal domain) A8A54_18100 PF00312 Ribosomal protein S15 A8A54_18105 PF03725 3' exoribonuclease family, domain 2 A8A54_18105 PF00575 S1 RNA binding domain A8A54_18105 PF00013 KH domain A8A54_18105 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain A8A54_18105 PF01138 3' exoribonuclease family, domain 1 A8A54_18110 PF08468 Methyltransferase small domain N-terminal A8A54_18110 PF05175 Methyltransferase small domain A8A54_18120 PF02801 Beta-ketoacyl synthase, C-terminal domain A8A54_18120 PF00109 Beta-ketoacyl synthase, N-terminal domain A8A54_18125 PF07977 FabA-like domain A8A54_18130 PF01475 Ferric uptake regulator family A8A54_18135 PF03180 NLPA lipoprotein A8A54_18150 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain A8A54_18150 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain A8A54_18155 PF00561 alpha/beta hydrolase fold A8A54_18160 PF00877 NlpC/P60 family A8A54_18170 PF02789 Cytosol aminopeptidase family, N-terminal domain A8A54_18170 PF00883 Cytosol aminopeptidase family, catalytic domain A8A54_18180 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain A8A54_18180 PF06827 Zinc finger found in FPG and IleRS A8A54_18180 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain A8A54_18185 PF00378 Enoyl-CoA hydratase/isomerase A8A54_18190 PF01649 Ribosomal protein S20 A8A54_18195 PF00308 Bacterial dnaA protein A8A54_18195 PF08299 Bacterial dnaA protein helix-turn-helix A8A54_18195 PF11638 DnaA N-terminal domain A8A54_18200 PF00712 DNA polymerase III beta subunit, N-terminal domain A8A54_18200 PF02767 DNA polymerase III beta subunit, central domain A8A54_18200 PF02768 DNA polymerase III beta subunit, C-terminal domain A8A54_18205 PF02463 RecF/RecN/SMC N terminal domain A8A54_18210 PF00581 Rhodanese-like domain A8A54_18210 PF00899 ThiF family A8A54_18230 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain A8A54_18235 PF00005 ABC transporter A8A54_18235 PF08352 Oligopeptide/dipeptide transporter, C-terminal region A8A54_18240 PF00528 Binding-protein-dependent transport system inner membrane component A8A54_18240 PF12911 N-terminal TM domain of oligopeptide transport permease C A8A54_18245 PF00528 Binding-protein-dependent transport system inner membrane component A8A54_18250 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle A8A54_18255 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle A8A54_18260 PF00034 Cytochrome c A8A54_18265 PF02348 Cytidylyltransferase A8A54_18270 PF00800 Prephenate dehydratase A8A54_18270 PF01817 Chorismate mutase type II A8A54_18275 PF09297 NADH pyrophosphatase zinc ribbon domain A8A54_18275 PF00293 NUDIX domain A8A54_18290 PF12170 DNA polymerase III tau subunit V interacting with alpha A8A54_18290 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding A8A54_18290 PF12169 DNA polymerase III subunits gamma and tau domain III A8A54_18295 PF02575 YbaB/EbfC DNA-binding family A8A54_18300 PF13662 Toprim domain A8A54_18300 PF02132 RecR protein A8A54_18310 PF01262 Alanine dehydrogenase/PNT, C-terminal domain A8A54_18310 PF08240 Alcohol dehydrogenase GroES-like domain A8A54_18315 PF03466 LysR substrate binding domain A8A54_18315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A8A54_18320 PF03601 Conserved hypothetical protein 698 A8A54_18325 PF01327 Polypeptide deformylase A8A54_18330 PF00575 S1 RNA binding domain A8A54_18335 PF02224 Cytidylate kinase A8A54_18340 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) A8A54_18360 PF13193 AMP-binding enzyme C-terminal domain A8A54_18360 PF00501 AMP-binding enzyme A8A54_18365 PF02770 Acyl-CoA dehydrogenase, middle domain A8A54_18365 PF00441 Acyl-CoA dehydrogenase, C-terminal domain A8A54_18365 PF02771 Acyl-CoA dehydrogenase, N-terminal domain A8A54_18370 PF01039 Carboxyl transferase domain A8A54_18375 PF02785 Biotin carboxylase C-terminal domain A8A54_18375 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain A8A54_18375 PF00364 Biotin-requiring enzyme A8A54_18375 PF00289 Biotin carboxylase, N-terminal domain A8A54_18380 PF00682 HMGL-like A8A54_18385 PF00378 Enoyl-CoA hydratase/isomerase A8A54_18390 PF13458 Periplasmic binding protein A8A54_18415 PF06481 COX Aromatic Rich Motif A8A54_18415 PF00116 Cytochrome C oxidase subunit II, periplasmic domain A8A54_18420 PF00115 Cytochrome C and Quinol oxidase polypeptide I A8A54_18425 PF00510 Cytochrome c oxidase subunit III A8A54_18430 PF03626 Prokaryotic Cytochrome C oxidase subunit IV A8A54_18440 PF07687 Peptidase dimerisation domain A8A54_18440 PF01546 Peptidase family M20/M25/M40 A8A54_18445 PF03466 LysR substrate binding domain A8A54_18445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A8A54_18485 PF00990 Diguanylate cyclase, GGDEF domain A8A54_18485 PF00072 Response regulator receiver domain A8A54_18490 PF01339 CheB methylesterase A8A54_18495 PF01739 CheR methyltransferase, SAM binding domain A8A54_18495 PF03705 CheR methyltransferase, all-alpha domain A8A54_18500 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) A8A54_18500 PF00072 Response regulator receiver domain A8A54_18500 PF01627 Hpt domain A8A54_18500 PF00512 His Kinase A (phospho-acceptor) domain A8A54_18500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A8A54_18500 PF00672 HAMP domain A8A54_18505 PF05532 CsbD-like A8A54_18535 PF07690 Major Facilitator Superfamily A8A54_18540 PF12833 Helix-turn-helix domain A8A54_18540 PF12852 Cupin A8A54_18565 PF13185 GAF domain A8A54_18575 PF03466 LysR substrate binding domain A8A54_18575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A8A54_18590 PF13091 PLD-like domain A8A54_18590 PF13396 Phospholipase_D-nuclease N-terminal A8A54_18595 PF01614 Bacterial transcriptional regulator A8A54_18595 PF09339 IclR helix-turn-helix domain A8A54_18600 PF00083 Sugar (and other) transporter A8A54_18605 PF05199 GMC oxidoreductase A8A54_18605 PF00732 GMC oxidoreductase A8A54_18610 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain A8A54_18610 PF00205 Thiamine pyrophosphate enzyme, central domain A8A54_18610 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain A8A54_18615 PF01515 Phosphate acetyl/butaryl transferase A8A54_18620 PF06968 Biotin and Thiamin Synthesis associated domain A8A54_18620 PF04055 Radical SAM superfamily A8A54_18625 PF00155 Aminotransferase class I and II A8A54_18635 PF00202 Aminotransferase class-III A8A54_18640 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III A8A54_18640 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal A8A54_18645 PF13533 Biotin-lipoyl like A8A54_18660 PF02311 AraC-like ligand binding domain A8A54_18660 PF12833 Helix-turn-helix domain A8A54_18670 PF01032 FecCD transport family A8A54_18675 PF01032 FecCD transport family A8A54_18690 PF07715 TonB-dependent Receptor Plug Domain A8A54_18690 PF00593 TonB dependent receptor A8A54_18690 PF07660 Secretin and TonB N terminus short domain A8A54_18725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A8A54_18725 PF03466 LysR substrate binding domain A8A54_18730 PF00528 Binding-protein-dependent transport system inner membrane component A8A54_18735 PF00528 Binding-protein-dependent transport system inner membrane component A8A54_18740 PF00005 ABC transporter A8A54_18745 PF00497 Bacterial extracellular solute-binding proteins, family 3 A8A54_18750 PF01266 FAD dependent oxidoreductase A8A54_18760 PF04324 BFD-like [2Fe-2S] binding domain A8A54_18760 PF07992 Pyridine nucleotide-disulphide oxidoreductase A8A54_18780 PF01638 HxlR-like helix-turn-helix A8A54_18840 PF00158 Sigma-54 interaction domain A8A54_18840 PF02954 Bacterial regulatory protein, Fis family A8A54_18840 PF00072 Response regulator receiver domain A8A54_18845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A8A54_18845 PF13426 PAS domain A8A54_18845 PF00072 Response regulator receiver domain A8A54_18860 PF12833 Helix-turn-helix domain A8A54_18875 PF00437 Type II/IV secretion system protein A8A54_18900 PF02254 TrkA-N domain A8A54_18900 PF00999 Sodium/hydrogen exchanger family A8A54_18915 PF03466 LysR substrate binding domain A8A54_18915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A8A54_18960 PF00497 Bacterial extracellular solute-binding proteins, family 3 A8A54_18965 PF00528 Binding-protein-dependent transport system inner membrane component A8A54_18970 PF00528 Binding-protein-dependent transport system inner membrane component A8A54_18975 PF00005 ABC transporter A8A54_18980 PF12897 Alanine-glyoxylate amino-transferase A8A54_18985 PF00289 Biotin carboxylase, N-terminal domain A8A54_18985 PF00364 Biotin-requiring enzyme A8A54_18985 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain A8A54_18985 PF00682 HMGL-like A8A54_18985 PF02785 Biotin carboxylase C-terminal domain A8A54_18985 PF02436 Conserved carboxylase domain A8A54_18995 PF01012 Electron transfer flavoprotein domain A8A54_18995 PF00766 Electron transfer flavoprotein FAD-binding domain A8A54_19000 PF01012 Electron transfer flavoprotein domain A8A54_19005 PF12697 Alpha/beta hydrolase family A8A54_19020 PF02515 CoA-transferase family III A8A54_19025 PF02771 Acyl-CoA dehydrogenase, N-terminal domain A8A54_19025 PF02770 Acyl-CoA dehydrogenase, middle domain A8A54_19025 PF00441 Acyl-CoA dehydrogenase, C-terminal domain A8A54_19030 PF03466 LysR substrate binding domain A8A54_19030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A8A54_19035 PF03746 LamB/YcsF family A8A54_19045 PF02626 Carboxyltransferase domain, subdomain A and B A8A54_19055 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain A8A54_19055 PF02785 Biotin carboxylase C-terminal domain A8A54_19055 PF00289 Biotin carboxylase, N-terminal domain A8A54_19060 PF00364 Biotin-requiring enzyme A8A54_19065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A8A54_19065 PF03466 LysR substrate binding domain A8A54_19070 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component A8A54_19080 PF03480 Bacterial extracellular solute-binding protein, family 7 A8A54_19085 PF00171 Aldehyde dehydrogenase family A8A54_19090 PF00180 Isocitrate/isopropylmalate dehydrogenase A8A54_19090 PF03737 Aldolase/RraA A8A54_19100 PF01566 Natural resistance-associated macrophage protein A8A54_19105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A8A54_19105 PF03466 LysR substrate binding domain A8A54_19115 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain A8A54_19115 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain A8A54_19135 PF00175 Oxidoreductase NAD-binding domain A8A54_19135 PF00970 Oxidoreductase FAD-binding domain A8A54_19135 PF00111 2Fe-2S iron-sulfur cluster binding domain A8A54_19140 PF02667 Short chain fatty acid transporter A8A54_19145 PF00440 Bacterial regulatory proteins, tetR family A8A54_19155 PF00005 ABC transporter A8A54_19160 PF00528 Binding-protein-dependent transport system inner membrane component A8A54_19170 PF00497 Bacterial extracellular solute-binding proteins, family 3 A8A54_19175 PF00291 Pyridoxal-phosphate dependent enzyme A8A54_19185 PF01047 MarR family A8A54_19210 PF12697 Alpha/beta hydrolase family A8A54_19215 PF00034 Cytochrome c A8A54_19215 PF13442 Cytochrome C oxidase, cbb3-type, subunit III A8A54_19220 PF05199 GMC oxidoreductase A8A54_19220 PF00732 GMC oxidoreductase A8A54_19225 PF13618 Gluconate 2-dehydrogenase subunit 3 A8A54_19230 PF07690 Major Facilitator Superfamily A8A54_19245 PF13333 Integrase core domain A8A54_19245 PF13276 HTH-like domain A8A54_19245 PF00665 Integrase core domain A8A54_19245 PF01527 Transposase A8A54_19270 PF00106 short chain dehydrogenase A8A54_19275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A8A54_19275 PF03466 LysR substrate binding domain A8A54_19280 PF00561 alpha/beta hydrolase fold A8A54_19285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A8A54_19285 PF03466 LysR substrate binding domain A8A54_19325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A8A54_19325 PF03466 LysR substrate binding domain A8A54_19340 PF00106 short chain dehydrogenase A8A54_19350 PF03466 LysR substrate binding domain A8A54_19350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A8A54_19355 PF03466 LysR substrate binding domain A8A54_19355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A8A54_19365 PF01638 HxlR-like helix-turn-helix A8A54_19370 PF00107 Zinc-binding dehydrogenase A8A54_19370 PF08240 Alcohol dehydrogenase GroES-like domain A8A54_19415 PF13744 Helix-turn-helix domain A8A54_19425 PF03743 Bacterial conjugation TrbI-like protein A8A54_19440 PF04610 TrbL/VirB6 plasmid conjugal transfer protein A8A54_19455 PF03135 CagE, TrbE, VirB family, component of type IV transporter system A8A54_19470 PF00437 Type II/IV secretion system protein A8A54_19475 PF00291 Pyridoxal-phosphate dependent enzyme A8A54_19475 PF00585 C-terminal regulatory domain of Threonine dehydratase A8A54_19485 PF02534 Type IV secretory system Conjugative DNA transfer A8A54_19500 PF06779 Uncharacterised MFS-type transporter YbfB A8A54_19505 PF03466 LysR substrate binding domain A8A54_19505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A8A54_19510 PF00175 Oxidoreductase NAD-binding domain A8A54_19510 PF00042 Globin A8A54_19510 PF00970 Oxidoreductase FAD-binding domain A8A54_19515 PF03060 Nitronate monooxygenase A8A54_19520 PF14552 Tautomerase enzyme A8A54_19535 PF01464 Transglycosylase SLT domain A8A54_19560 PF13614 AAA domain A8A54_19585 PF05284 Protein of unknown function (DUF736) A8A54_19590 PF12833 Helix-turn-helix domain A8A54_19590 PF06719 AraC-type transcriptional regulator N-terminus A8A54_19605 PF00665 Integrase core domain A8A54_19615 PF09397 Ftsk gamma domain A8A54_19615 PF17854 FtsK alpha domain A8A54_19615 PF01580 FtsK/SpoIIIE family A8A54_19620 PF02463 RecF/RecN/SMC N terminal domain A8A54_19695 PF00486 Transcriptional regulatory protein, C terminal A8A54_19695 PF00072 Response regulator receiver domain A8A54_19700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A8A54_19700 PF00512 His Kinase A (phospho-acceptor) domain A8A54_19710 PF03466 LysR substrate binding domain A8A54_19710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A8A54_19720 PF07690 Major Facilitator Superfamily A8A54_19725 PF03466 LysR substrate binding domain A8A54_19725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A8A54_19730 PF05552 Conserved TM helix A8A54_19730 PF00924 Mechanosensitive ion channel A8A54_19740 PF01590 GAF domain A8A54_19740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A8A54_19740 PF00360 Phytochrome region A8A54_19740 PF00512 His Kinase A (phospho-acceptor) domain A8A54_19740 PF08446 PAS fold A8A54_19745 PF01810 LysE type translocator A8A54_19750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A8A54_19750 PF03466 LysR substrate binding domain A8A54_19760 PF00248 Aldo/keto reductase family A8A54_19765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A8A54_19765 PF03466 LysR substrate binding domain A8A54_19770 PF01266 FAD dependent oxidoreductase A8A54_19775 PF02585 GlcNAc-PI de-N-acetylase A8A54_19785 PF08484 C-methyltransferase C-terminal domain A8A54_19785 PF08421 Putative zinc binding domain A8A54_19790 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase A8A54_19795 PF16254 Domain of unknown function (DUF4910) A8A54_19795 PF16221 winged helix-turn-helix A8A54_19795 PF09940 Domain of unknown function (DUF2172) A8A54_19800 PF01370 NAD dependent epimerase/dehydratase family A8A54_19810 PF00202 Aminotransferase class-III A8A54_19815 PF00534 Glycosyl transferases group 1 A8A54_19835 PF00953 Glycosyl transferase family 4 A8A54_19840 PF00535 Glycosyl transferase family 2 A8A54_19855 PF00132 Bacterial transferase hexapeptide (six repeats) A8A54_19860 PF01594 AI-2E family transporter A8A54_19865 PF00221 Aromatic amino acid lyase A8A54_19865 PF01979 Amidohydrolase family A8A54_19895 PF16363 GDP-mannose 4,6 dehydratase A8A54_19900 PF01370 NAD dependent epimerase/dehydratase family A8A54_19915 PF00196 Bacterial regulatory proteins, luxR family A8A54_19915 PF00072 Response regulator receiver domain A8A54_19925 PF17392 Urocanase C-terminal domain A8A54_19925 PF01175 Urocanase Rossmann-like domain A8A54_19925 PF17391 Urocanase N-terminal domain A8A54_19930 PF00440 Bacterial regulatory proteins, tetR family A8A54_19935 PF01979 Amidohydrolase family A8A54_19940 PF00528 Binding-protein-dependent transport system inner membrane component A8A54_19945 PF00005 ABC transporter A8A54_19945 PF08402 TOBE domain A8A54_19955 PF00528 Binding-protein-dependent transport system inner membrane component A8A54_19975 PF10005 zinc-ribbon domain A8A54_19975 PF15887 Putative zinc-binding metallo-peptidase A8A54_19985 PF14403 Circularly permuted ATP-grasp type 2 A8A54_19990 PF04168 A predicted alpha-helical domain with a conserved ER motif. A8A54_19990 PF14403 Circularly permuted ATP-grasp type 2 A8A54_20000 PF03466 LysR substrate binding domain A8A54_20000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A8A54_20010 PF04069 Substrate binding domain of ABC-type glycine betaine transport system A8A54_20015 PF00528 Binding-protein-dependent transport system inner membrane component A8A54_20020 PF00005 ABC transporter A8A54_20025 PF00528 Binding-protein-dependent transport system inner membrane component A8A54_20030 PF07804 HipA-like C-terminal domain A8A54_20030 PF13657 HipA N-terminal domain A8A54_20050 PF00593 TonB dependent receptor A8A54_20050 PF07715 TonB-dependent Receptor Plug Domain A8A54_20060 PF01494 FAD binding domain A8A54_20065 PF01053 Cys/Met metabolism PLP-dependent enzyme A8A54_20075 PF00990 Diguanylate cyclase, GGDEF domain A8A54_20090 PF17804 Tail specific protease N-terminal domain A8A54_20090 PF03572 Peptidase family S41 A8A54_20090 PF00595 PDZ domain A8A54_20090 PF11818 C-terminal domain of tail specific protease (DUF3340) A8A54_20095 PF02653 Branched-chain amino acid transport system / permease component A8A54_20100 PF00005 ABC transporter A8A54_20105 PF00356 Bacterial regulatory proteins, lacI family A8A54_20110 PF01156 Inosine-uridine preferring nucleoside hydrolase A8A54_20115 PF00356 Bacterial regulatory proteins, lacI family A8A54_20120 PF00005 ABC transporter A8A54_20120 PF08402 TOBE domain A8A54_20125 PF00528 Binding-protein-dependent transport system inner membrane component A8A54_20135 PF00072 Response regulator receiver domain A8A54_20135 PF00486 Transcriptional regulatory protein, C terminal A8A54_20140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A8A54_20140 PF00512 His Kinase A (phospho-acceptor) domain A8A54_20160 PF07690 Major Facilitator Superfamily A8A54_20165 PF02615 Malate/L-lactate dehydrogenase A8A54_20190 PF00563 EAL domain A8A54_20190 PF00990 Diguanylate cyclase, GGDEF domain A8A54_20190 PF08447 PAS fold A8A54_20190 PF08448 PAS fold A8A54_20205 PF01032 FecCD transport family A8A54_20210 PF00005 ABC transporter A8A54_20215 PF00873 AcrB/AcrD/AcrF family A8A54_20220 PF13533 Biotin-lipoyl like A8A54_20230 PF02308 MgtC family A8A54_20245 PF01730 UreF A8A54_20250 PF03253 Urea transporter A8A54_20255 PF00449 Urease alpha-subunit, N-terminal domain A8A54_20255 PF01979 Amidohydrolase family A8A54_20260 PF00699 Urease beta subunit A8A54_20270 PF01774 UreD urease accessory protein A8A54_20275 PF02814 UreE urease accessory protein, N-terminal domain A8A54_20275 PF05194 UreE urease accessory protein, C-terminal domain A8A54_20280 PF02492 CobW/HypB/UreG, nucleotide-binding domain A8A54_20295 PF00724 NADH:flavin oxidoreductase / NADH oxidase family A8A54_20305 PF00561 alpha/beta hydrolase fold A8A54_20310 PF07536 HWE histidine kinase A8A54_20310 PF08447 PAS fold A8A54_20310 PF13426 PAS domain A8A54_20315 PF00072 Response regulator receiver domain A8A54_20315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A8A54_20315 PF13426 PAS domain A8A54_20320 PF12697 Alpha/beta hydrolase family A8A54_20335 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion A8A54_20335 PF00529 HlyD membrane-fusion protein of T1SS A8A54_20340 PF04632 Fusaric acid resistance protein family A8A54_20350 PF13505 Outer membrane protein beta-barrel domain A8A54_20355 PF00171 Aldehyde dehydrogenase family A8A54_20360 PF07687 Peptidase dimerisation domain A8A54_20360 PF01546 Peptidase family M20/M25/M40 A8A54_20390 PF07886 BA14K-like protein A8A54_20405 PF00593 TonB dependent receptor A8A54_20405 PF07715 TonB-dependent Receptor Plug Domain A8A54_20410 PF12833 Helix-turn-helix domain A8A54_20415 PF07715 TonB-dependent Receptor Plug Domain A8A54_20415 PF00593 TonB dependent receptor A8A54_20465 PF12792 CSS motif domain associated with EAL A8A54_20465 PF00563 EAL domain A8A54_20470 PF12951 Passenger-associated-transport-repeat A8A54_20475 PF12833 Helix-turn-helix domain A8A54_20480 PF07690 Major Facilitator Superfamily A8A54_20490 PF00392 Bacterial regulatory proteins, gntR family A8A54_20490 PF07729 FCD domain A8A54_20495 PF01177 Asp/Glu/Hydantoin racemase A8A54_20505 PF00392 Bacterial regulatory proteins, gntR family A8A54_20505 PF07729 FCD domain A8A54_20510 PF00005 ABC transporter A8A54_20510 PF08352 Oligopeptide/dipeptide transporter, C-terminal region A8A54_20515 PF08352 Oligopeptide/dipeptide transporter, C-terminal region A8A54_20515 PF00005 ABC transporter A8A54_20520 PF01979 Amidohydrolase family A8A54_20525 PF01979 Amidohydrolase family A8A54_20530 PF00528 Binding-protein-dependent transport system inner membrane component A8A54_20530 PF12911 N-terminal TM domain of oligopeptide transport permease C A8A54_20535 PF00528 Binding-protein-dependent transport system inner membrane component A8A54_20540 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle A8A54_20545 PF13382 Adenine deaminase C-terminal domain A8A54_20545 PF01979 Amidohydrolase family A8A54_20550 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle A8A54_20555 PF01979 Amidohydrolase family A8A54_20565 PF03466 LysR substrate binding domain A8A54_20565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A8A54_20575 PF00528 Binding-protein-dependent transport system inner membrane component A8A54_20580 PF12911 N-terminal TM domain of oligopeptide transport permease C A8A54_20580 PF00528 Binding-protein-dependent transport system inner membrane component A8A54_20585 PF00144 Beta-lactamase A8A54_20590 PF00155 Aminotransferase class I and II A8A54_20605 PF00144 Beta-lactamase A8A54_20610 PF01047 MarR family A8A54_20615 PF07690 Major Facilitator Superfamily A8A54_20620 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain A8A54_20620 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain A8A54_20625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A8A54_20625 PF03466 LysR substrate binding domain A8A54_20645 PF00027 Cyclic nucleotide-binding domain A8A54_20645 PF13545 Crp-like helix-turn-helix domain A8A54_20655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A8A54_20655 PF03466 LysR substrate binding domain A8A54_20660 PF03358 NADPH-dependent FMN reductase A8A54_20670 PF02082 Transcriptional regulator A8A54_20680 PF00762 Ferrochelatase A8A54_20740 PF00440 Bacterial regulatory proteins, tetR family A8A54_20750 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH A8A54_20760 PF16868 NMT1-like family A8A54_20765 PF16868 NMT1-like family A8A54_20780 PF02469 Fasciclin domain A8A54_20790 PF12697 Alpha/beta hydrolase family A8A54_20825 PF02027 RolB/RolC glucosidase family A8A54_20825 PF01593 Flavin containing amine oxidoreductase A8A54_20875 PF00437 Type II/IV secretion system protein A8A54_20880 PF03743 Bacterial conjugation TrbI-like protein A8A54_20885 PF03524 Conjugal transfer protein A8A54_20890 PF04335 VirB8 protein A8A54_20900 PF04610 TrbL/VirB6 plasmid conjugal transfer protein A8A54_20915 PF03135 CagE, TrbE, VirB family, component of type IV transporter system A8A54_20920 PF05101 Type IV secretory pathway, VirB3-like protein A8A54_20925 PF04956 TrbC/VIRB2 family A8A54_20930 PF01464 Transglycosylase SLT domain A8A54_20955 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle A8A54_20960 PF00528 Binding-protein-dependent transport system inner membrane component A8A54_20965 PF12911 N-terminal TM domain of oligopeptide transport permease C A8A54_20965 PF00528 Binding-protein-dependent transport system inner membrane component A8A54_20970 PF08352 Oligopeptide/dipeptide transporter, C-terminal region A8A54_20970 PF00005 ABC transporter A8A54_20975 PF09587 Bacterial capsule synthesis protein PGA_cap A8A54_20980 PF07687 Peptidase dimerisation domain A8A54_20980 PF01546 Peptidase family M20/M25/M40 A8A54_20985 PF01381 Helix-turn-helix A8A54_21015 PF00765 Autoinducer synthase A8A54_21025 PF01443 Viral (Superfamily 1) RNA helicase A8A54_21025 PF17841 BID domain of Bartonella effector protein (Bep) A8A54_21025 PF03389 MobA/MobL family A8A54_21035 PF06412 Conjugal transfer protein TraD A8A54_21040 PF02534 Type IV secretory system Conjugative DNA transfer A8A54_21045 PF05284 Protein of unknown function (DUF736) A8A54_21070 PF01380 SIS domain A8A54_21075 PF00294 pfkB family carbohydrate kinase A8A54_21080 PF08402 TOBE domain A8A54_21080 PF00005 ABC transporter A8A54_21085 PF14698 Argininosuccinate lyase C-terminal A8A54_21085 PF00206 Lyase A8A54_21090 PF00528 Binding-protein-dependent transport system inner membrane component A8A54_21095 PF00528 Binding-protein-dependent transport system inner membrane component A8A54_21100 PF01547 Bacterial extracellular solute-binding protein A8A54_21105 PF00480 ROK family A8A54_21115 PF11800 Replication protein C C-terminal region A8A54_21115 PF03428 Replication protein C N-terminal domain A8A54_21120 PF02195 ParB-like nuclease domain A8A54_21120 PF07506 RepB plasmid partitioning protein A8A54_21125 PF00376 MerR family regulatory protein A8A54_21125 PF13614 AAA domain A8A54_21270 PF07756 Protein of unknown function (DUF1612) A8A54_21270 PF11972 HTH DNA binding domain A8A54_21280 PF01381 Helix-turn-helix A8A54_21320 PF13276 HTH-like domain A8A54_21320 PF13333 Integrase core domain A8A54_21320 PF00665 Integrase core domain A8A54_21335 PF09339 IclR helix-turn-helix domain A8A54_21335 PF01614 Bacterial transcriptional regulator A8A54_21340 PF01144 Coenzyme A transferase A8A54_21345 PF01144 Coenzyme A transferase A8A54_21350 PF00108 Thiolase, N-terminal domain A8A54_21350 PF02803 Thiolase, C-terminal domain A8A54_21355 PF03466 LysR substrate binding domain A8A54_21355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A8A54_21360 PF00596 Class II Aldolase and Adducin N-terminal domain A8A54_21365 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain A8A54_21365 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain A8A54_21375 PF00497 Bacterial extracellular solute-binding proteins, family 3 A8A54_21380 PF00171 Aldehyde dehydrogenase family A8A54_21385 PF00202 Aminotransferase class-III A8A54_21390 PF01266 FAD dependent oxidoreductase A8A54_21395 PF00005 ABC transporter A8A54_21400 PF00528 Binding-protein-dependent transport system inner membrane component A8A54_21405 PF00528 Binding-protein-dependent transport system inner membrane component A8A54_21410 PF01012 Electron transfer flavoprotein domain A8A54_21415 PF00766 Electron transfer flavoprotein FAD-binding domain A8A54_21415 PF01012 Electron transfer flavoprotein domain A8A54_21425 PF13610 DDE domain A8A54_21430 PF00202 Aminotransferase class-III A8A54_21435 PF03746 LamB/YcsF family A8A54_21445 PF02626 Carboxyltransferase domain, subdomain A and B A8A54_21450 PF02682 Carboxyltransferase domain, subdomain C and D A8A54_21455 PF00289 Biotin carboxylase, N-terminal domain A8A54_21455 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain A8A54_21455 PF02785 Biotin carboxylase C-terminal domain A8A54_21475 PF03737 Aldolase/RraA A8A54_21480 PF00083 Sugar (and other) transporter A8A54_21490 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain A8A54_21490 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain A8A54_21495 PF05161 MOFRL family A8A54_21495 PF13660 Domain of unknown function (DUF4147) A8A54_21505 PF00689 Cation transporting ATPase, C-terminus A8A54_21505 PF00690 Cation transporter/ATPase, N-terminus A8A54_21515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A8A54_21515 PF00989 PAS fold A8A54_21515 PF00512 His Kinase A (phospho-acceptor) domain A8A54_21515 PF13426 PAS domain A8A54_21515 PF13493 Domain of unknown function (DUF4118) A8A54_21515 PF08447 PAS fold A8A54_21520 PF00196 Bacterial regulatory proteins, luxR family A8A54_21520 PF00072 Response regulator receiver domain A8A54_21545 PF02028 BCCT, betaine/carnitine/choline family transporter A8A54_21550 PF00924 Mechanosensitive ion channel A8A54_21550 PF05552 Conserved TM helix A8A54_21565 PF04221 RelB antitoxin A8A54_21580 PF01402 Ribbon-helix-helix protein, copG family A8A54_21585 PF05016 ParE toxin of type II toxin-antitoxin system, parDE A8A54_21610 PF07660 Secretin and TonB N terminus short domain A8A54_21610 PF00593 TonB dependent receptor A8A54_21610 PF07715 TonB-dependent Receptor Plug Domain A8A54_21620 PF04954 Siderophore-interacting protein A8A54_21620 PF08021 Siderophore-interacting FAD-binding domain A8A54_21625 PF01032 FecCD transport family A8A54_21630 PF01032 FecCD transport family A8A54_21640 PF01850 PIN domain A8A54_21645 PF09957 Bacterial antitoxin of type II TA system, VapB A8A54_21655 PF04945 YHS domain A8A54_21665 PF04273 Putative phosphatase (DUF442) A8A54_21665 PF00753 Metallo-beta-lactamase superfamily A8A54_21675 PF04143 Sulphur transport A8A54_21690 PF10011 Predicted membrane protein (DUF2254) A8A54_21710 PF13426 PAS domain A8A54_21710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A8A54_21710 PF00072 Response regulator receiver domain A8A54_21730 PF03797 Autotransporter beta-domain A8A54_21730 PF03212 Pertactin A8A54_21740 PF00072 Response regulator receiver domain A8A54_21740 PF00486 Transcriptional regulatory protein, C terminal A8A54_21745 PF00665 Integrase core domain A8A54_21750 PF01695 IstB-like ATP binding protein A8A54_21770 PF13188 PAS domain A8A54_21770 PF03707 Bacterial signalling protein N terminal repeat A8A54_21770 PF00990 Diguanylate cyclase, GGDEF domain A8A54_21770 PF00563 EAL domain A8A54_21775 PF02796 Helix-turn-helix domain of resolvase A8A54_21775 PF00239 Resolvase, N terminal domain A8A54_21785 PF00072 Response regulator receiver domain A8A54_21785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A8A54_21785 PF00512 His Kinase A (phospho-acceptor) domain A8A54_21785 PF09456 RcsC Alpha-Beta-Loop (ABL) A8A54_21790 PF12951 Passenger-associated-transport-repeat A8A54_21795 PF06776 Invasion associated locus B (IalB) protein A8A54_21820 PF04198 Putative sugar-binding domain A8A54_21830 PF00528 Binding-protein-dependent transport system inner membrane component A8A54_21835 PF00005 ABC transporter A8A54_21835 PF17912 MalK OB fold domain A8A54_21840 PF00753 Metallo-beta-lactamase superfamily A8A54_21840 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain A8A54_21840 PF17770 Ribonuclease J C-terminal domain A8A54_21845 PF01975 Survival protein SurE A8A54_21850 PF02690 Na+/Pi-cotransporter A8A54_21870 PF04960 Glutaminase A8A54_21880 PF01850 PIN domain A8A54_21885 PF07704 Rv0623-like transcription factor A8A54_21900 PF00313 'Cold-shock' DNA-binding domain A8A54_21920 PF00593 TonB dependent receptor A8A54_21920 PF07715 TonB-dependent Receptor Plug Domain A8A54_21925 PF01497 Periplasmic binding protein A8A54_21930 PF01032 FecCD transport family A8A54_21935 PF00005 ABC transporter A8A54_21960 PF07536 HWE histidine kinase A8A54_21960 PF13581 Histidine kinase-like ATPase domain A8A54_21960 PF13426 PAS domain A8A54_21980 PF07687 Peptidase dimerisation domain A8A54_21980 PF01546 Peptidase family M20/M25/M40 A8A54_21985 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle A8A54_21990 PF03466 LysR substrate binding domain A8A54_21990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A8A54_21995 PF00701 Dihydrodipicolinate synthetase family A8A54_22000 PF06052 3-hydroxyanthranilic acid dioxygenase A8A54_22005 PF13458 Periplasmic binding protein A8A54_22010 PF02653 Branched-chain amino acid transport system / permease component A8A54_22020 PF00005 ABC transporter A8A54_22025 PF00005 ABC transporter A8A54_22030 PF01958 Domain of unknown function DUF108 A8A54_22030 PF03447 Homoserine dehydrogenase, NAD binding domain A8A54_22040 PF00171 Aldehyde dehydrogenase family A8A54_22055 PF02811 PHP domain A8A54_22055 PF14579 Helix-hairpin-helix motif A8A54_22055 PF17657 Bacterial DNA polymerase III alpha subunit finger domain A8A54_22055 PF07733 Bacterial DNA polymerase III alpha NTPase domain A8A54_22055 PF01336 OB-fold nucleic acid binding domain A8A54_22070 PF13361 UvrD-like helicase C-terminal domain A8A54_22070 PF00580 UvrD/REP helicase N-terminal domain A8A54_22075 PF04679 ATP dependent DNA ligase C terminal region A8A54_22075 PF01068 ATP dependent DNA ligase domain A8A54_22075 PF13298 DNA polymerase Ligase (LigD) A8A54_22090 PF03449 Transcription elongation factor, N-terminal A8A54_22090 PF01272 Transcription elongation factor, GreA/GreB, C-term A8A54_22105 PF01965 DJ-1/PfpI family A8A54_22130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A8A54_22130 PF00072 Response regulator receiver domain A8A54_22130 PF13426 PAS domain A8A54_22150 PF02824 TGS domain A8A54_22150 PF04607 Region found in RelA / SpoT proteins A8A54_22150 PF13291 ACT domain A8A54_22155 PF01037 Lrp/AsnC ligand binding domain A8A54_22160 PF01262 Alanine dehydrogenase/PNT, C-terminal domain A8A54_22160 PF05222 Alanine dehydrogenase/PNT, N-terminal domain A8A54_22165 PF00528 Binding-protein-dependent transport system inner membrane component A8A54_22170 PF00005 ABC transporter A8A54_22180 PF00561 alpha/beta hydrolase fold A8A54_22185 PF00392 Bacterial regulatory proteins, gntR family A8A54_22185 PF00155 Aminotransferase class I and II A8A54_22190 PF03594 Benzoate membrane transport protein A8A54_22195 PF00083 Sugar (and other) transporter A8A54_22200 PF06481 COX Aromatic Rich Motif A8A54_22200 PF00116 Cytochrome C oxidase subunit II, periplasmic domain A8A54_22205 PF00115 Cytochrome C and Quinol oxidase polypeptide I A8A54_22210 PF00510 Cytochrome c oxidase subunit III A8A54_22215 PF03626 Prokaryotic Cytochrome C oxidase subunit IV A8A54_22245 PF03372 Endonuclease/Exonuclease/phosphatase family A8A54_22285 PF00248 Aldo/keto reductase family A8A54_22290 PF03466 LysR substrate binding domain A8A54_22290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A8A54_22300 PF11799 impB/mucB/samB family C-terminal domain A8A54_22300 PF00817 impB/mucB/samB family A8A54_22310 PF02423 Ornithine cyclodeaminase/mu-crystallin family A8A54_22325 PF02515 CoA-transferase family III A8A54_22330 PF00528 Binding-protein-dependent transport system inner membrane component A8A54_22335 PF00528 Binding-protein-dependent transport system inner membrane component A8A54_22340 PF08402 TOBE domain A8A54_22340 PF00005 ABC transporter A8A54_22355 PF03466 LysR substrate binding domain A8A54_22355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A8A54_22365 PF00561 alpha/beta hydrolase fold A8A54_22370 PF07690 Major Facilitator Superfamily A8A54_22375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A8A54_22375 PF03466 LysR substrate binding domain A8A54_22420 PF01527 Transposase A8A54_22440 PF01594 AI-2E family transporter A8A54_22460 PF08212 Lipocalin-like domain A8A54_22510 PF02245 Methylpurine-DNA glycosylase (MPG) A8A54_22515 PF03358 NADPH-dependent FMN reductase A8A54_22520 PF06628 Catalase-related immune-responsive A8A54_22520 PF00199 Catalase A8A54_22520 PF18011 C-terminal domain found in long catalases A8A54_22530 PF08240 Alcohol dehydrogenase GroES-like domain A8A54_22530 PF13823 Alcohol dehydrogenase GroES-associated A8A54_22530 PF00107 Zinc-binding dehydrogenase A8A54_22575 PF04542 Sigma-70 region 2 A8A54_22575 PF08281 Sigma-70, region 4 A8A54_22600 PF04542 Sigma-70 region 2 A8A54_22600 PF08281 Sigma-70, region 4 A8A54_22635 PF02735 Ku70/Ku80 beta-barrel domain A8A54_22640 PF02735 Ku70/Ku80 beta-barrel domain A8A54_22660 PF00528 Binding-protein-dependent transport system inner membrane component A8A54_22665 PF00005 ABC transporter A8A54_22675 PF06434 Aconitate hydratase 2 N-terminus A8A54_22675 PF00330 Aconitase family (aconitate hydratase) A8A54_22675 PF11791 Aconitate B N-terminal domain A8A54_22685 PF00528 Binding-protein-dependent transport system inner membrane component A8A54_22690 PF00528 Binding-protein-dependent transport system inner membrane component A8A54_22695 PF08402 TOBE domain A8A54_22695 PF00005 ABC transporter A8A54_22705 PF02894 Oxidoreductase family, C-terminal alpha/beta domain A8A54_22705 PF01408 Oxidoreductase family, NAD-binding Rossmann fold A8A54_22730 PF00501 AMP-binding enzyme A8A54_22730 PF00550 Phosphopantetheine attachment site A8A54_22730 PF13193 AMP-binding enzyme C-terminal domain A8A54_22730 PF00668 Condensation domain A8A54_22735 PF00583 Acetyltransferase (GNAT) family A8A54_22740 PF17837 4'-phosphopantetheinyl transferase N-terminal domain A8A54_22740 PF01648 4'-phosphopantetheinyl transferase superfamily A8A54_22745 PF01569 PAP2 superfamily A8A54_22750 PF00486 Transcriptional regulatory protein, C terminal A8A54_22750 PF00072 Response regulator receiver domain A8A54_22755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A8A54_22755 PF00512 His Kinase A (phospho-acceptor) domain A8A54_22760 PF06719 AraC-type transcriptional regulator N-terminus A8A54_22760 PF12833 Helix-turn-helix domain A8A54_22765 PF08240 Alcohol dehydrogenase GroES-like domain A8A54_22765 PF00107 Zinc-binding dehydrogenase A8A54_22770 PF08013 Tagatose 6 phosphate kinase A8A54_22775 PF00294 pfkB family carbohydrate kinase A8A54_22780 PF02653 Branched-chain amino acid transport system / permease component A8A54_22785 PF00005 ABC transporter A8A54_22800 PF00356 Bacterial regulatory proteins, lacI family A8A54_22810 PF00528 Binding-protein-dependent transport system inner membrane component A8A54_22815 PF00528 Binding-protein-dependent transport system inner membrane component A8A54_22820 PF17912 MalK OB fold domain A8A54_22820 PF00005 ABC transporter A8A54_22830 PF08240 Alcohol dehydrogenase GroES-like domain A8A54_22830 PF16912 Glucose dehydrogenase C-terminus A8A54_22840 PF00691 OmpA family A8A54_22845 PF03707 Bacterial signalling protein N terminal repeat A8A54_22845 PF00563 EAL domain A8A54_22845 PF00990 Diguanylate cyclase, GGDEF domain A8A54_22850 PF01614 Bacterial transcriptional regulator A8A54_22850 PF09339 IclR helix-turn-helix domain A8A54_22860 PF00528 Binding-protein-dependent transport system inner membrane component A8A54_22865 PF00005 ABC transporter A8A54_22870 PF00701 Dihydrodipicolinate synthetase family A8A54_22875 PF01070 FMN-dependent dehydrogenase A8A54_22880 PF01565 FAD binding domain A8A54_22880 PF02913 FAD linked oxidases, C-terminal domain A8A54_22900 PF00202 Aminotransferase class-III A8A54_22910 PF00497 Bacterial extracellular solute-binding proteins, family 3 A8A54_22925 PF00005 ABC transporter A8A54_22935 PF00356 Bacterial regulatory proteins, lacI family A8A54_22945 PF01547 Bacterial extracellular solute-binding protein A8A54_22950 PF00528 Binding-protein-dependent transport system inner membrane component A8A54_22955 PF00528 Binding-protein-dependent transport system inner membrane component A8A54_22965 PF00294 pfkB family carbohydrate kinase A8A54_22970 PF05430 S-adenosyl-L-methionine-dependent methyltransferase A8A54_22970 PF01266 FAD dependent oxidoreductase A8A54_22975 PF00005 ABC transporter A8A54_22975 PF17912 MalK OB fold domain A8A54_22975 PF03459 TOBE domain A8A54_23020 PF02469 Fasciclin domain A8A54_23030 PF00313 'Cold-shock' DNA-binding domain A8A54_23035 PF00005 ABC transporter A8A54_23040 PF00005 ABC transporter A8A54_23040 PF12399 Branched-chain amino acid ATP-binding cassette transporter A8A54_23045 PF00561 alpha/beta hydrolase fold A8A54_23050 PF13378 Enolase C-terminal domain-like A8A54_23055 PF00375 Sodium:dicarboxylate symporter family A8A54_23060 PF13657 HipA N-terminal domain A8A54_23060 PF07804 HipA-like C-terminal domain A8A54_23080 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle A8A54_23085 PF00528 Binding-protein-dependent transport system inner membrane component A8A54_23090 PF00528 Binding-protein-dependent transport system inner membrane component A8A54_23090 PF12911 N-terminal TM domain of oligopeptide transport permease C A8A54_23095 PF00005 ABC transporter A8A54_23095 PF08352 Oligopeptide/dipeptide transporter, C-terminal region A8A54_23100 PF01266 FAD dependent oxidoreductase A8A54_23110 PF07687 Peptidase dimerisation domain A8A54_23110 PF01546 Peptidase family M20/M25/M40 A8A54_23120 PF01850 PIN domain A8A54_23130 PF00665 Integrase core domain A8A54_23130 PF13936 Helix-turn-helix domain A8A54_23140 PF08220 DeoR-like helix-turn-helix domain A8A54_23140 PF00455 DeoR C terminal sensor domain A8A54_23145 PF04198 Putative sugar-binding domain A8A54_23150 PF01547 Bacterial extracellular solute-binding protein A8A54_23155 PF00528 Binding-protein-dependent transport system inner membrane component A8A54_23160 PF00528 Binding-protein-dependent transport system inner membrane component A8A54_23165 PF17912 MalK OB fold domain A8A54_23165 PF00005 ABC transporter A8A54_23170 PF00005 ABC transporter A8A54_23170 PF17912 MalK OB fold domain A8A54_23175 PF02782 FGGY family of carbohydrate kinases, C-terminal domain A8A54_23175 PF00370 FGGY family of carbohydrate kinases, N-terminal domain A8A54_23180 PF01842 ACT domain A8A54_23180 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain A8A54_23180 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain A8A54_23185 PF00596 Class II Aldolase and Adducin N-terminal domain A8A54_23195 PF02782 FGGY family of carbohydrate kinases, C-terminal domain A8A54_23220 PF03390 2-hydroxycarboxylate transporter family A8A54_23230 PF01022 Bacterial regulatory protein, arsR family A8A54_23235 PF00571 CBS domain A8A54_23235 PF03471 Transporter associated domain A8A54_23235 PF01595 Cyclin M transmembrane N-terminal domain A8A54_23245 PF01032 FecCD transport family A8A54_23250 PF00005 ABC transporter A8A54_23255 PF03951 Glutamine synthetase, beta-Grasp domain A8A54_23255 PF00120 Glutamine synthetase, catalytic domain A8A54_23260 PF00982 Glycosyltransferase family 20 A8A54_23265 PF02358 Trehalose-phosphatase A8A54_23300 PF01758 Sodium Bile acid symporter family A8A54_23305 PF03960 ArsC family A8A54_23310 PF03358 NADPH-dependent FMN reductase A8A54_23325 PF02308 MgtC family A8A54_23335 PF07722 Peptidase C26 A8A54_23340 PF03576 Peptidase family S58 A8A54_23345 PF00005 ABC transporter A8A54_23355 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion A8A54_23360 PF02321 Outer membrane efflux protein A8A54_23375 PF03895 YadA-like membrane anchor domain A8A54_23375 PF05662 Coiled stalk of trimeric autotransporter adhesin A8A54_23375 PF05658 Head domain of trimeric autotransporter adhesin A8A54_23380 PF00892 EamA-like transporter family A8A54_23385 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily A8A54_23390 PF01738 Dienelactone hydrolase family A8A54_23400 PF05977 Transmembrane secretion effector A8A54_23405 PF02530 Porin subfamily A8A54_23415 PF00528 Binding-protein-dependent transport system inner membrane component A8A54_23420 PF00528 Binding-protein-dependent transport system inner membrane component A8A54_23430 PF03459 TOBE domain A8A54_23430 PF17912 MalK OB fold domain A8A54_23430 PF00005 ABC transporter A8A54_23440 PF01261 Xylose isomerase-like TIM barrel A8A54_23445 PF00596 Class II Aldolase and Adducin N-terminal domain A8A54_23450 PF07005 Sugar-binding N-terminal domain A8A54_23450 PF17042 Nucleotide-binding C-terminal domain A8A54_23455 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase A8A54_23455 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase A8A54_23460 PF01370 NAD dependent epimerase/dehydratase family A8A54_23465 PF07702 UTRA domain A8A54_23465 PF00392 Bacterial regulatory proteins, gntR family