locus-tag class description Pmu3358_00010 PF00440 Bacterial regulatory proteins, tetR family Pmu3358_00015 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Pmu3358_00020 PF13185 GAF domain Pmu3358_00025 PF00873 AcrB/AcrD/AcrF family Pmu3358_00030 PF01594 AI-2E family transporter Pmu3358_00035 PF03960 ArsC family Pmu3358_00040 PF03889 Alternative ribosome-rescue factor A Pmu3358_00045 PF17347 Family of unknown function (DUF5377) Pmu3358_00050 PF00206 Lyase Pmu3358_00050 PF14698 Argininosuccinate lyase C-terminal Pmu3358_00055 PF00696 Amino acid kinase family Pmu3358_00060 PF01118 Semialdehyde dehydrogenase, NAD binding domain Pmu3358_00060 PF02774 Semialdehyde dehydrogenase, dimerisation domain Pmu3358_00065 PF01546 Peptidase family M20/M25/M40 Pmu3358_00065 PF07687 Peptidase dimerisation domain Pmu3358_00070 PF04488 Glycosyltransferase sugar-binding region containing DXD motif Pmu3358_00085 PF03725 3' exoribonuclease family, domain 2 Pmu3358_00085 PF00013 KH domain Pmu3358_00085 PF00575 S1 RNA binding domain Pmu3358_00085 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain Pmu3358_00085 PF01138 3' exoribonuclease family, domain 1 Pmu3358_00095 PF00270 DEAD/DEAH box helicase Pmu3358_00095 PF00271 Helicase conserved C-terminal domain Pmu3358_00095 PF03880 DbpA RNA binding domain Pmu3358_00100 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain Pmu3358_00100 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain Pmu3358_00105 PF00005 ABC transporter Pmu3358_00110 PF00528 Binding-protein-dependent transport system inner membrane component Pmu3358_00120 PF00118 TCP-1/cpn60 chaperonin family Pmu3358_00125 PF00166 Chaperonin 10 Kd subunit Pmu3358_00135 PF03806 AbgT putative transporter family Pmu3358_00140 PF00206 Lyase Pmu3358_00140 PF10415 Fumarase C C-terminus Pmu3358_00145 PF02092 Glycyl-tRNA synthetase beta subunit Pmu3358_00145 PF05746 DALR anticodon binding domain Pmu3358_00155 PF13417 Glutathione S-transferase, N-terminal domain Pmu3358_00165 PF02091 Glycyl-tRNA synthetase alpha subunit Pmu3358_00170 PF10011 Predicted membrane protein (DUF2254) Pmu3358_00175 PF00378 Enoyl-CoA hydratase/isomerase Pmu3358_00180 PF13378 Enolase C-terminal domain-like Pmu3358_00185 PF01220 Dehydroquinase class II Pmu3358_00190 PF00364 Biotin-requiring enzyme Pmu3358_00195 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Pmu3358_00195 PF02785 Biotin carboxylase C-terminal domain Pmu3358_00195 PF00289 Biotin carboxylase, N-terminal domain Pmu3358_00200 PF06196 Protein of unknown function (DUF997) Pmu3358_00205 PF00474 Sodium:solute symporter family Pmu3358_00215 PF01207 Dihydrouridine synthase (Dus) Pmu3358_00220 PF02954 Bacterial regulatory protein, Fis family Pmu3358_00225 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain Pmu3358_00225 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal Pmu3358_00225 PF02769 AIR synthase related protein, C-terminal domain Pmu3358_00250 PF07715 TonB-dependent Receptor Plug Domain Pmu3358_00250 PF00593 TonB dependent receptor Pmu3358_00255 PF00005 ABC transporter Pmu3358_00260 PF01032 FecCD transport family Pmu3358_00265 PF01497 Periplasmic binding protein Pmu3358_00280 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Pmu3358_00280 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Pmu3358_00280 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Pmu3358_00280 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain Pmu3358_00285 PF17311 Family of unknown function (DUF5358) Pmu3358_00295 PF06826 Predicted Permease Membrane Region Pmu3358_00295 PF02080 TrkA-C domain Pmu3358_00300 PF04175 Protein of unknown function (DUF406) Pmu3358_00310 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain Pmu3358_00310 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain Pmu3358_00315 PF02976 DNA mismatch repair enzyme MutH Pmu3358_00320 PF03741 Integral membrane protein TerC family Pmu3358_00325 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain Pmu3358_00325 PF01367 5'-3' exonuclease, C-terminal SAM fold Pmu3358_00325 PF01612 3'-5' exonuclease Pmu3358_00325 PF00476 DNA polymerase family A Pmu3358_00330 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) Pmu3358_00335 PF05068 Mannitol repressor Pmu3358_00340 PF01232 Mannitol dehydrogenase Rossmann domain Pmu3358_00340 PF08125 Mannitol dehydrogenase C-terminal domain Pmu3358_00345 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit Pmu3358_00345 PF02378 Phosphotransferase system, EIIC Pmu3358_00345 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 Pmu3358_00350 PF07119 Protein of unknown function (DUF1375) Pmu3358_00355 PF13361 UvrD-like helicase C-terminal domain Pmu3358_00355 PF00580 UvrD/REP helicase N-terminal domain Pmu3358_00370 PF00874 PRD domain Pmu3358_00375 PF13419 Haloacid dehalogenase-like hydrolase Pmu3358_00390 PF02664 S-Ribosylhomocysteinase (LuxS) Pmu3358_00395 PF02222 ATP-grasp domain Pmu3358_00395 PF01370 NAD dependent epimerase/dehydratase family Pmu3358_00400 PF00578 AhpC/TSA family Pmu3358_00405 PF00701 Dihydrodipicolinate synthetase family Pmu3358_00410 PF06804 NlpB/DapX lipoprotein Pmu3358_00415 PF00892 EamA-like transporter family Pmu3358_00420 PF02655 ATP-grasp domain Pmu3358_00420 PF18419 ATP-grasp-like domain Pmu3358_00420 PF04262 Glutamate-cysteine ligase Pmu3358_00425 PF05116 Sucrose-6F-phosphate phosphohydrolase Pmu3358_00430 PF02562 PhoH-like protein Pmu3358_00435 PF02130 Uncharacterized protein family UPF0054 Pmu3358_00445 PF05127 Helicase Pmu3358_00445 PF17176 tRNA-binding domain Pmu3358_00445 PF13718 GNAT acetyltransferase 2 Pmu3358_00455 PF08019 Phosphoethanolamine transferase EptA/EptB Pmu3358_00455 PF00884 Sulfatase Pmu3358_00460 PF17757 UvrB interaction domain Pmu3358_00460 PF03461 TRCF domain Pmu3358_00460 PF00271 Helicase conserved C-terminal domain Pmu3358_00460 PF02559 CarD-like/TRCF domain Pmu3358_00460 PF00270 DEAD/DEAH box helicase Pmu3358_00465 PF02653 Branched-chain amino acid transport system / permease component Pmu3358_00470 PF00005 ABC transporter Pmu3358_00475 PF13407 Periplasmic binding protein domain Pmu3358_00480 PF00356 Bacterial regulatory proteins, lacI family Pmu3358_00485 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain Pmu3358_00485 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain Pmu3358_00490 PF10509 Galactokinase galactose-binding signature Pmu3358_00490 PF08544 GHMP kinases C terminal Pmu3358_00490 PF00288 GHMP kinases N terminal domain Pmu3358_00495 PF01263 Aldose 1-epimerase Pmu3358_00500 PF03471 Transporter associated domain Pmu3358_00500 PF00571 CBS domain Pmu3358_00505 PF00795 Carbon-nitrogen hydrolase Pmu3358_00510 PF01176 Translation initiation factor 1A / IF-1 Pmu3358_00515 PF16363 GDP-mannose 4,6 dehydratase Pmu3358_00520 PF12404 Peptidase Pmu3358_00520 PF00883 Cytosol aminopeptidase family, catalytic domain Pmu3358_00525 PF00334 Nucleoside diphosphate kinase Pmu3358_00530 PF00438 S-adenosylmethionine synthetase, N-terminal domain Pmu3358_00530 PF02772 S-adenosylmethionine synthetase, central domain Pmu3358_00530 PF02773 S-adenosylmethionine synthetase, C-terminal domain Pmu3358_00535 PF10263 SprT-like family Pmu3358_00535 PF17283 SprT-like zinc ribbon domain Pmu3358_00540 PF02462 Opacity family porin protein Pmu3358_00545 PF00183 Hsp90 protein Pmu3358_00545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Pmu3358_00550 PF03960 ArsC family Pmu3358_00555 PF01546 Peptidase family M20/M25/M40 Pmu3358_00555 PF07687 Peptidase dimerisation domain Pmu3358_00560 PF02557 D-alanyl-D-alanine carboxypeptidase Pmu3358_00565 PF00293 NUDIX domain Pmu3358_00570 PF00149 Calcineurin-like phosphoesterase Pmu3358_00575 PF13614 AAA domain Pmu3358_00575 PF13807 G-rich domain on putative tyrosine kinase Pmu3358_00575 PF02706 Chain length determinant protein Pmu3358_00580 PF01451 Low molecular weight phosphotyrosine protein phosphatase Pmu3358_00585 PF10531 SLBB domain Pmu3358_00585 PF02563 Polysaccharide biosynthesis/export protein Pmu3358_00585 PF18412 Outer-membrane lipoprotein Wza C-terminal domain Pmu3358_00590 PF02719 Polysaccharide biosynthesis protein Pmu3358_00595 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family Pmu3358_00620 PF02350 UDP-N-acetylglucosamine 2-epimerase Pmu3358_00625 PF01370 NAD dependent epimerase/dehydratase family Pmu3358_00650 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain Pmu3358_00650 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Pmu3358_00650 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain Pmu3358_00655 PF01494 FAD binding domain Pmu3358_00660 PF04055 Radical SAM superfamily Pmu3358_00660 PF00919 Uncharacterized protein family UPF0004 Pmu3358_00660 PF01938 TRAM domain Pmu3358_00665 PF04650 YSIRK type signal peptide Pmu3358_00665 PF13088 BNR repeat-like domain Pmu3358_00665 PF02973 Sialidase, N-terminal domain Pmu3358_00670 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family Pmu3358_00675 PF06629 MltA-interacting protein MipA Pmu3358_00680 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Pmu3358_00685 PF02687 FtsX-like permease family Pmu3358_00685 PF00005 ABC transporter Pmu3358_00685 PF12704 MacB-like periplasmic core domain Pmu3358_00705 PF01053 Cys/Met metabolism PLP-dependent enzyme Pmu3358_00710 PF00085 Thioredoxin Pmu3358_00720 PF00849 RNA pseudouridylate synthase Pmu3358_00720 PF01479 S4 domain Pmu3358_00725 PF12111 Polyribonucleotide phosphorylase C terminal Pmu3358_00725 PF10150 Ribonuclease E/G family Pmu3358_00725 PF00575 S1 RNA binding domain Pmu3358_00735 PF03553 Na+/H+ antiporter family Pmu3358_00735 PF13726 Na+-H+ antiporter family Pmu3358_00740 PF00929 Exonuclease Pmu3358_00745 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Pmu3358_00755 PF13649 Methyltransferase domain Pmu3358_00760 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family Pmu3358_00765 PF02938 GAD domain Pmu3358_00765 PF00152 tRNA synthetases class II (D, K and N) Pmu3358_00765 PF01336 OB-fold nucleic acid binding domain Pmu3358_00775 PF00293 NUDIX domain Pmu3358_00780 PF01709 Transcriptional regulator Pmu3358_00790 PF02075 Crossover junction endodeoxyribonuclease RuvC Pmu3358_00795 PF01330 RuvA N terminal domain Pmu3358_00795 PF07499 RuvA, C-terminal domain Pmu3358_00800 PF17864 RuvB AAA lid domain Pmu3358_00800 PF05491 RuvB C-terminal winged helix domain Pmu3358_00800 PF05496 Holliday junction DNA helicase RuvB P-loop domain Pmu3358_00805 PF17274 Family of unknown function (DUF5339) Pmu3358_00810 PF01654 Cytochrome bd terminal oxidase subunit I Pmu3358_00815 PF02322 Cytochrome bd terminal oxidase subunit II Pmu3358_00830 PF03061 Thioesterase superfamily Pmu3358_00835 PF01618 MotA/TolQ/ExbB proton channel family Pmu3358_00840 PF02472 Biopolymer transport protein ExbD/TolR Pmu3358_00845 PF06519 TolA C-terminal Pmu3358_00850 PF07676 WD40-like Beta Propeller Repeat Pmu3358_00850 PF04052 TolB amino-terminal domain Pmu3358_00855 PF00691 OmpA family Pmu3358_00865 PF07963 Prokaryotic N-terminal methylation motif Pmu3358_00875 PF10833 Protein of unknown function (DUF2572) Pmu3358_00880 PF17344 Family of unknown function (DUF5374) Pmu3358_00885 PF17946 RecC C-terminal domain Pmu3358_00890 PF00583 Acetyltransferase (GNAT) family Pmu3358_00895 PF03603 DNA polymerase III psi subunit Pmu3358_00900 PF08468 Methyltransferase small domain N-terminal Pmu3358_00900 PF05175 Methyltransferase small domain Pmu3358_00905 PF00005 ABC transporter Pmu3358_00905 PF08402 TOBE domain Pmu3358_00910 PF00528 Binding-protein-dependent transport system inner membrane component Pmu3358_00930 PF00485 Phosphoribulokinase / Uridine kinase family Pmu3358_00935 PF06559 2'-deoxycytidine 5'-triphosphate deaminase (DCD) Pmu3358_00955 PF01740 STAS domain Pmu3358_00955 PF00916 Sulfate permease family Pmu3358_00960 PF01081 KDPG and KHG aldolase Pmu3358_00970 PF01406 tRNA synthetases class I (C) catalytic domain Pmu3358_00970 PF09190 DALR domain Pmu3358_00975 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD Pmu3358_00980 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD Pmu3358_00985 PF01026 TatD related DNase Pmu3358_01000 PF13597 Anaerobic ribonucleoside-triphosphate reductase Pmu3358_01000 PF03477 ATP cone domain Pmu3358_01005 PF14376 Haem-binding domain Pmu3358_01005 PF03150 Di-haem cytochrome c peroxidase Pmu3358_01005 PF00034 Cytochrome c Pmu3358_01010 PF00709 Adenylosuccinate synthetase Pmu3358_01015 PF00696 Amino acid kinase family Pmu3358_01015 PF01842 ACT domain Pmu3358_01020 PF00171 Aldehyde dehydrogenase family Pmu3358_01025 PF03458 UPF0126 domain Pmu3358_01035 PF03606 C4-dicarboxylate anaerobic carrier Pmu3358_01040 PF01546 Peptidase family M20/M25/M40 Pmu3358_01040 PF07687 Peptidase dimerisation domain Pmu3358_01050 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain Pmu3358_01055 PF02875 Mur ligase family, glutamate ligase domain Pmu3358_01055 PF01225 Mur ligase family, catalytic domain Pmu3358_01055 PF08245 Mur ligase middle domain Pmu3358_01065 PF06725 3D domain Pmu3358_01065 PF03562 MltA specific insert domain Pmu3358_01070 PF00899 ThiF family Pmu3358_01075 PF01297 Zinc-uptake complex component A periplasmic Pmu3358_01080 PF00501 AMP-binding enzyme Pmu3358_01090 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain Pmu3358_01090 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain Pmu3358_01095 PF01641 SelR domain Pmu3358_01100 PF00625 Guanylate kinase Pmu3358_01105 PF01192 RNA polymerase Rpb6 Pmu3358_01110 PF04607 Region found in RelA / SpoT proteins Pmu3358_01110 PF02824 TGS domain Pmu3358_01110 PF13291 ACT domain Pmu3358_01115 PF00271 Helicase conserved C-terminal domain Pmu3358_01115 PF00270 DEAD/DEAH box helicase Pmu3358_01115 PF17191 RecG wedge domain Pmu3358_01120 PF04345 Chorismate lyase Pmu3358_01125 PF01177 Asp/Glu/Hydantoin racemase Pmu3358_01145 PF02899 Phage integrase, N-terminal SAM-like domain Pmu3358_01145 PF00589 Phage integrase family Pmu3358_01165 PF01636 Phosphotransferase enzyme family Pmu3358_01170 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase Pmu3358_01175 PF01636 Phosphotransferase enzyme family Pmu3358_01200 PF07690 Major Facilitator Superfamily Pmu3358_01205 PF03466 LysR substrate binding domain Pmu3358_01205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Pmu3358_01215 PF00398 Ribosomal RNA adenine dimethylase Pmu3358_01220 PF00589 Phage integrase family Pmu3358_01220 PF02899 Phage integrase, N-terminal SAM-like domain Pmu3358_01425 PF01751 Toprim domain Pmu3358_01425 PF01131 DNA topoisomerase Pmu3358_01445 PF00248 Aldo/keto reductase family Pmu3358_01465 PF07732 Multicopper oxidase Pmu3358_01465 PF07731 Multicopper oxidase Pmu3358_01485 PF10706 Aminoglycoside-2''-adenylyltransferase Pmu3358_01490 PF01909 Nucleotidyltransferase domain Pmu3358_01490 PF13427 Domain of unknown function (DUF4111) Pmu3358_01495 PF00905 Penicillin binding protein transpeptidase domain Pmu3358_01505 PF01636 Phosphotransferase enzyme family Pmu3358_01510 PF07690 Major Facilitator Superfamily Pmu3358_01530 PF00436 Single-strand binding protein family Pmu3358_01560 PF00772 DnaB-like helicase N terminal domain Pmu3358_01560 PF03796 DnaB-like helicase C terminal domain Pmu3358_01580 PF01243 Pyridoxamine 5'-phosphate oxidase Pmu3358_01585 PF07715 TonB-dependent Receptor Plug Domain Pmu3358_01585 PF00593 TonB dependent receptor Pmu3358_01585 PF04886 PT repeat Pmu3358_01590 PF00312 Ribosomal protein S15 Pmu3358_01595 PF10609 NUBPL iron-transfer P-loop NTPase Pmu3358_01600 PF09334 tRNA synthetases class I (M) Pmu3358_01600 PF01588 Putative tRNA binding domain Pmu3358_01605 PF01170 Putative RNA methylase family UPF0020 Pmu3358_01605 PF02926 THUMP domain Pmu3358_01605 PF10672 S-adenosylmethionine-dependent methyltransferase Pmu3358_01615 PF09614 CRISPR-associated protein (Cas_Csy2) Pmu3358_01620 PF09615 CRISPR-associated protein (Cas_Csy3) Pmu3358_01630 PF01867 CRISPR associated protein Cas1 Pmu3358_01635 PF18019 HD domain Pmu3358_01640 PF01627 Hpt domain Pmu3358_01640 PF00989 PAS fold Pmu3358_01640 PF00072 Response regulator receiver domain Pmu3358_01640 PF18415 Histidine kinase receptor ArcB trans-membrane domain Pmu3358_01640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Pmu3358_01640 PF00512 His Kinase A (phospho-acceptor) domain Pmu3358_01650 PF00459 Inositol monophosphatase family Pmu3358_01655 PF00588 SpoU rRNA Methylase family Pmu3358_01660 PF02082 Transcriptional regulator Pmu3358_01665 PF00266 Aminotransferase class-V Pmu3358_01670 PF01592 NifU-like N terminal domain Pmu3358_01675 PF01521 Iron-sulphur cluster biosynthesis Pmu3358_01680 PF07743 HSCB C-terminal oligomerisation domain Pmu3358_01685 PF00012 Hsp70 protein Pmu3358_01690 PF00111 2Fe-2S iron-sulfur cluster binding domain Pmu3358_01695 PF00912 Transglycosylase Pmu3358_01700 PF01371 Trp repressor protein Pmu3358_01705 PF14718 Soluble lytic murein transglycosylase L domain Pmu3358_01705 PF01464 Transglycosylase SLT domain Pmu3358_01710 PF03795 YCII-related domain Pmu3358_01715 PF03061 Thioesterase superfamily Pmu3358_01720 PF04279 Intracellular septation protein A Pmu3358_01730 PF03922 OmpW family Pmu3358_01735 PF02463 RecF/RecN/SMC N terminal domain Pmu3358_01740 PF01513 ATP-NAD kinase Pmu3358_01745 PF01025 GrpE Pmu3358_01750 PF00375 Sodium:dicarboxylate symporter family Pmu3358_01755 PF04886 PT repeat Pmu3358_01755 PF07715 TonB-dependent Receptor Plug Domain Pmu3358_01755 PF00593 TonB dependent receptor Pmu3358_01760 PF05430 S-adenosyl-L-methionine-dependent methyltransferase Pmu3358_01760 PF01266 FAD dependent oxidoreductase Pmu3358_01765 PF00109 Beta-ketoacyl synthase, N-terminal domain Pmu3358_01765 PF02801 Beta-ketoacyl synthase, C-terminal domain Pmu3358_01770 PF08003 Protein of unknown function (DUF1698) Pmu3358_01775 PF00474 Sodium:solute symporter family Pmu3358_01780 PF10150 Ribonuclease E/G family Pmu3358_01780 PF00575 S1 RNA binding domain Pmu3358_01790 PF01523 Putative modulator of DNA gyrase Pmu3358_01795 PF00202 Aminotransferase class-III Pmu3358_01800 PF02677 Epoxyqueuosine reductase QueH Pmu3358_01805 PF00348 Polyprenyl synthetase Pmu3358_01810 PF00829 Ribosomal prokaryotic L21 protein Pmu3358_01815 PF01016 Ribosomal L27 protein Pmu3358_01820 PF00892 EamA-like transporter family Pmu3358_01825 PF00892 EamA-like transporter family Pmu3358_01830 PF01018 GTP1/OBG Pmu3358_01830 PF01926 50S ribosome-binding GTPase Pmu3358_01835 PF01475 Ferric uptake regulator family Pmu3358_01840 PF00258 Flavodoxin Pmu3358_01845 PF01402 Ribbon-helix-helix protein, copG family Pmu3358_01850 PF00561 alpha/beta hydrolase fold Pmu3358_01855 PF17206 SeqA protein N-terminal domain Pmu3358_01855 PF03925 SeqA protein C-terminal domain Pmu3358_01860 PF00501 AMP-binding enzyme Pmu3358_01865 PF12795 Mechanosensitive ion channel porin domain Pmu3358_01865 PF00924 Mechanosensitive ion channel Pmu3358_01865 PF12794 Mechanosensitive ion channel inner membrane domain 1 Pmu3358_01870 PF01264 Chorismate synthase Pmu3358_01875 PF03411 Penicillin-insensitive murein endopeptidase Pmu3358_01880 PF01925 Sulfite exporter TauE/SafE Pmu3358_01885 PF03279 Bacterial lipid A biosynthesis acyltransferase Pmu3358_01890 PF00156 Phosphoribosyl transferase domain Pmu3358_01895 PF12169 DNA polymerase III subunits gamma and tau domain III Pmu3358_01895 PF12170 DNA polymerase III tau subunit V interacting with alpha Pmu3358_01900 PF00999 Sodium/hydrogen exchanger family Pmu3358_01905 PF01042 Endoribonuclease L-PSP Pmu3358_01910 PF14256 YwiC-like protein Pmu3358_01920 PF03989 DNA gyrase C-terminal domain, beta-propeller Pmu3358_01920 PF00521 DNA gyrase/topoisomerase IV, subunit A Pmu3358_01925 PF00986 DNA gyrase B subunit, carboxyl terminus Pmu3358_01925 PF01751 Toprim domain Pmu3358_01925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Pmu3358_01925 PF00204 DNA gyrase B Pmu3358_01930 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain Pmu3358_01945 PF13847 Methyltransferase domain Pmu3358_01945 PF10119 Predicted methyltransferase regulatory domain Pmu3358_01950 PF03710 Glutamate-ammonia ligase adenylyltransferase Pmu3358_01950 PF08335 GlnD PII-uridylyltransferase Pmu3358_01965 PF00005 ABC transporter Pmu3358_01970 PF06968 Biotin and Thiamin Synthesis associated domain Pmu3358_01970 PF04055 Radical SAM superfamily Pmu3358_01975 PF00209 Sodium:neurotransmitter symporter family Pmu3358_01980 PF00730 HhH-GPD superfamily base excision DNA repair protein Pmu3358_01980 PF00633 Helix-hairpin-helix motif Pmu3358_01980 PF10576 Iron-sulfur binding domain of endonuclease III Pmu3358_01985 PF02508 Rnf-Nqr subunit, membrane protein Pmu3358_01990 PF04205 FMN-binding domain Pmu3358_01995 PF03116 NQR2, RnfD, RnfE family Pmu3358_02005 PF04060 Putative Fe-S cluster Pmu3358_02010 PF02508 Rnf-Nqr subunit, membrane protein Pmu3358_02015 PF13609 Gram-negative porin Pmu3358_02020 PF13609 Gram-negative porin Pmu3358_02025 PF05175 Methyltransferase small domain Pmu3358_02030 PF01713 Smr domain Pmu3358_02035 PF12805 FUSC-like inner membrane protein yccS Pmu3358_02040 PF03733 Inner membrane component domain Pmu3358_02045 PF02142 MGS-like domain Pmu3358_02050 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) Pmu3358_02055 PF00708 Acylphosphatase Pmu3358_02060 PF00950 ABC 3 transport family Pmu3358_02065 PF00950 ABC 3 transport family Pmu3358_02070 PF00005 ABC transporter Pmu3358_02075 PF01297 Zinc-uptake complex component A periplasmic Pmu3358_02080 PF04358 DsrC like protein Pmu3358_02085 PF01027 Inhibitor of apoptosis-promoting Bax1 Pmu3358_02090 PF04216 Protein involved in formate dehydrogenase formation Pmu3358_02095 PF01292 Prokaryotic cytochrome b561 Pmu3358_02100 PF13247 4Fe-4S dicluster domain Pmu3358_02100 PF09163 Formate dehydrogenase N, transmembrane Pmu3358_02105 PF00384 Molybdopterin oxidoreductase Pmu3358_02105 PF01568 Molydopterin dinucleotide binding domain Pmu3358_02105 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Pmu3358_02110 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Pmu3358_02110 PF00384 Molybdopterin oxidoreductase Pmu3358_02110 PF01568 Molydopterin dinucleotide binding domain Pmu3358_02115 PF02634 FdhD/NarQ family Pmu3358_02120 PF00580 UvrD/REP helicase N-terminal domain Pmu3358_02120 PF13361 UvrD-like helicase C-terminal domain Pmu3358_02125 PF03796 DnaB-like helicase C terminal domain Pmu3358_02125 PF00772 DnaB-like helicase N terminal domain Pmu3358_02130 PF01168 Alanine racemase, N-terminal domain Pmu3358_02130 PF00842 Alanine racemase, C-terminal domain Pmu3358_02135 PF00535 Glycosyl transferase family 2 Pmu3358_02145 PF00342 Phosphoglucose isomerase Pmu3358_02165 PF08267 Cobalamin-independent synthase, N-terminal domain Pmu3358_02165 PF01717 Cobalamin-independent synthase, Catalytic domain Pmu3358_02170 PF03466 LysR substrate binding domain Pmu3358_02170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Pmu3358_02175 PF10688 Bacterial inner membrane protein Pmu3358_02180 PF00005 ABC transporter Pmu3358_02180 PF12848 ABC transporter Pmu3358_02185 PF06226 Protein of unknown function (DUF1007) Pmu3358_02190 PF03824 High-affinity nickel-transport protein Pmu3358_02195 PF01699 Sodium/calcium exchanger protein Pmu3358_02205 PF02151 UvrB/uvrC motif Pmu3358_02205 PF12344 Ultra-violet resistance protein B Pmu3358_02205 PF00271 Helicase conserved C-terminal domain Pmu3358_02205 PF04851 Type III restriction enzyme, res subunit Pmu3358_02205 PF17757 UvrB interaction domain Pmu3358_02215 PF00512 His Kinase A (phospho-acceptor) domain Pmu3358_02215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Pmu3358_02220 PF00486 Transcriptional regulatory protein, C terminal Pmu3358_02220 PF00072 Response regulator receiver domain Pmu3358_02225 PF00005 ABC transporter Pmu3358_02230 PF00528 Binding-protein-dependent transport system inner membrane component Pmu3358_02235 PF00528 Binding-protein-dependent transport system inner membrane component Pmu3358_02240 PF12849 PBP superfamily domain Pmu3358_02245 PF01728 FtsJ-like methyltransferase Pmu3358_02250 PF01434 Peptidase family M41 Pmu3358_02250 PF06480 FtsH Extracellular Pmu3358_02250 PF17862 AAA+ lid domain Pmu3358_02250 PF00004 ATPase family associated with various cellular activities (AAA) Pmu3358_02255 PF00809 Pterin binding enzyme Pmu3358_02260 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Pmu3358_02260 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Pmu3358_02260 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Pmu3358_02260 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain Pmu3358_02265 PF00300 Histidine phosphatase superfamily (branch 1) Pmu3358_02275 PF03775 Septum formation inhibitor MinC, C-terminal domain Pmu3358_02275 PF05209 Septum formation inhibitor MinC, N-terminal domain Pmu3358_02280 PF05166 YcgL domain Pmu3358_02295 PF00578 AhpC/TSA family Pmu3358_02300 PF02687 FtsX-like permease family Pmu3358_02300 PF12704 MacB-like periplasmic core domain Pmu3358_02300 PF00005 ABC transporter Pmu3358_02310 PF02687 FtsX-like permease family Pmu3358_02310 PF12704 MacB-like periplasmic core domain Pmu3358_02310 PF00005 ABC transporter Pmu3358_02320 PF10634 Fe2+ transport protein Pmu3358_02325 PF03239 Iron permease FTR1 family Pmu3358_02330 PF03575 Peptidase family S51 Pmu3358_02335 PF04261 Dyp-type peroxidase family Pmu3358_02340 PF00912 Transglycosylase Pmu3358_02340 PF00905 Penicillin binding protein transpeptidase domain Pmu3358_02340 PF14814 Bifunctional transglycosylase second domain Pmu3358_02345 PF06062 Uncharacterised protein family (UPF0231) Pmu3358_02350 PF01521 Iron-sulphur cluster biosynthesis Pmu3358_02355 PF00557 Metallopeptidase family M24 Pmu3358_02360 PF08335 GlnD PII-uridylyltransferase Pmu3358_02360 PF01966 HD domain Pmu3358_02370 PF00202 Aminotransferase class-III Pmu3358_02375 PF00953 Glycosyl transferase family 4 Pmu3358_02395 PF03956 Lysine exporter LysO Pmu3358_02400 PF11398 Protein of unknown function (DUF2813) Pmu3358_02405 PF00817 impB/mucB/samB family Pmu3358_02405 PF11799 impB/mucB/samB family C-terminal domain Pmu3358_02405 PF11798 IMS family HHH motif Pmu3358_02410 PF01435 Peptidase family M48 Pmu3358_02415 PF04315 Elongation factor P hydroxylase Pmu3358_02430 PF16868 NMT1-like family Pmu3358_02445 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases Pmu3358_02445 PF11892 Domain of unknown function (DUF3412) Pmu3358_02445 PF03641 Possible lysine decarboxylase Pmu3358_02450 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term Pmu3358_02450 PF14489 QueF-like protein Pmu3358_02455 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) Pmu3358_02460 PF04287 tRNA pseudouridine synthase C Pmu3358_02465 PF00849 RNA pseudouridylate synthase Pmu3358_02470 PF03701 Uncharacterised protein family (UPF0181) Pmu3358_02480 PF06303 MatP N-terminal domain Pmu3358_02480 PF17414 MatP C-terminal ribbon-helix-helix domain Pmu3358_02485 PF05362 Lon protease (S16) C-terminal proteolytic domain Pmu3358_02485 PF13654 AAA domain Pmu3358_02490 PF07977 FabA-like domain Pmu3358_02495 PF04073 Aminoacyl-tRNA editing domain Pmu3358_02570 PF17346 Family of unknown function (DUF5376) Pmu3358_02575 PF17346 Family of unknown function (DUF5376) Pmu3358_02580 PF02698 DUF218 domain Pmu3358_02585 PF01943 Polysaccharide biosynthesis protein Pmu3358_02590 PF07922 Glycosyltransferase family 52 Pmu3358_02595 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) Pmu3358_02605 PF00535 Glycosyl transferase family 2 Pmu3358_02610 PF00535 Glycosyl transferase family 2 Pmu3358_02615 PF13406 Transglycosylase SLT domain Pmu3358_02620 PF00860 Permease family Pmu3358_02625 PF02635 DsrE/DsrF-like family Pmu3358_02630 PF12705 PD-(D/E)XK nuclease superfamily Pmu3358_02630 PF13361 UvrD-like helicase C-terminal domain Pmu3358_02630 PF00580 UvrD/REP helicase N-terminal domain Pmu3358_02635 PF13538 UvrD-like helicase C-terminal domain Pmu3358_02640 PF04399 Glutaredoxin 2, C terminal domain Pmu3358_02640 PF13417 Glutathione S-transferase, N-terminal domain Pmu3358_02645 PF07411 Domain of unknown function (DUF1508) Pmu3358_02650 PF00572 Ribosomal protein L13 Pmu3358_02655 PF00380 Ribosomal protein S9/S16 Pmu3358_02660 PF13417 Glutathione S-transferase, N-terminal domain Pmu3358_02660 PF00043 Glutathione S-transferase, C-terminal domain Pmu3358_02665 PF04386 Stringent starvation protein B Pmu3358_02675 PF00571 CBS domain Pmu3358_02675 PF01380 SIS domain Pmu3358_02685 PF03932 CutC family Pmu3358_02690 PF02321 Outer membrane efflux protein Pmu3358_02695 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain Pmu3358_02695 PF00749 tRNA synthetases class I (E and Q), catalytic domain Pmu3358_02700 PF01235 Sodium:alanine symporter family Pmu3358_02715 PF13292 1-deoxy-D-xylulose-5-phosphate synthase Pmu3358_02715 PF02779 Transketolase, pyrimidine binding domain Pmu3358_02715 PF02780 Transketolase, C-terminal domain Pmu3358_02720 PF00348 Polyprenyl synthetase Pmu3358_02725 PF02609 Exonuclease VII small subunit Pmu3358_02730 PF01568 Molydopterin dinucleotide binding domain Pmu3358_02730 PF18364 Molybdopterin oxidoreductase N-terminal domain Pmu3358_02730 PF00384 Molybdopterin oxidoreductase Pmu3358_02735 PF03264 NapC/NirT cytochrome c family, N-terminal region Pmu3358_02740 PF02926 THUMP domain Pmu3358_02740 PF02568 Thiamine biosynthesis protein (ThiI) Pmu3358_02745 PF04269 Protein of unknown function, DUF440 Pmu3358_02750 PF00174 Oxidoreductase molybdopterin binding domain Pmu3358_02755 PF01794 Ferric reductase like transmembrane component Pmu3358_02765 PF02446 4-alpha-glucanotransferase Pmu3358_02770 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) Pmu3358_02770 PF02806 Alpha amylase, C-terminal all-beta domain Pmu3358_02770 PF00128 Alpha amylase, catalytic domain Pmu3358_02775 PF18390 Glycogen debranching enzyme C-terminal domain Pmu3358_02775 PF00128 Alpha amylase, catalytic domain Pmu3358_02775 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) Pmu3358_02780 PF00483 Nucleotidyl transferase Pmu3358_02785 PF08323 Starch synthase catalytic domain Pmu3358_02785 PF00534 Glycosyl transferases group 1 Pmu3358_02790 PF00343 Carbohydrate phosphorylase Pmu3358_02795 PF00311 Phosphoenolpyruvate carboxylase Pmu3358_02800 PF00356 Bacterial regulatory proteins, lacI family Pmu3358_02805 PF01370 NAD dependent epimerase/dehydratase family Pmu3358_02805 PF08338 Domain of unknown function (DUF1731) Pmu3358_02810 PF01316 Arginine repressor, DNA binding domain Pmu3358_02810 PF02863 Arginine repressor, C-terminal domain Pmu3358_02815 PF00056 lactate/malate dehydrogenase, NAD binding domain Pmu3358_02815 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain Pmu3358_02820 PF00750 tRNA synthetases class I (R) Pmu3358_02820 PF05746 DALR anticodon binding domain Pmu3358_02820 PF03485 Arginyl tRNA synthetase N terminal domain Pmu3358_02825 PF06185 YecM protein Pmu3358_02835 PF05433 Glycine zipper 2TM domain Pmu3358_02840 PF03462 PCRF domain Pmu3358_02840 PF00472 RF-1 domain Pmu3358_02845 PF17827 PrmC N-terminal domain Pmu3358_02845 PF13847 Methyltransferase domain Pmu3358_02850 PF13369 Transglutaminase-like superfamily Pmu3358_02855 PF00793 DAHP synthetase I family Pmu3358_02860 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Pmu3358_02860 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Pmu3358_02865 PF12704 MacB-like periplasmic core domain Pmu3358_02865 PF02687 FtsX-like permease family Pmu3358_02870 PF00005 ABC transporter Pmu3358_02875 PF12704 MacB-like periplasmic core domain Pmu3358_02875 PF02687 FtsX-like permease family Pmu3358_02880 PF00793 DAHP synthetase I family Pmu3358_02890 PF07969 Amidohydrolase family Pmu3358_02895 PF01063 Amino-transferase class IV Pmu3358_02900 PF03466 LysR substrate binding domain Pmu3358_02900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Pmu3358_02905 PF18125 RlmM ferredoxin-like domain Pmu3358_02905 PF01728 FtsJ-like methyltransferase Pmu3358_02910 PF04305 Protein of unknown function (DUF455) Pmu3358_02915 PF02551 Acyl-CoA thioesterase Pmu3358_02925 PF00005 ABC transporter Pmu3358_02925 PF00664 ABC transporter transmembrane region Pmu3358_02930 PF00664 ABC transporter transmembrane region Pmu3358_02930 PF00005 ABC transporter Pmu3358_02935 PF07992 Pyridine nucleotide-disulphide oxidoreductase Pmu3358_02945 PF00484 Carbonic anhydrase Pmu3358_02950 PF07715 TonB-dependent Receptor Plug Domain Pmu3358_02950 PF00593 TonB dependent receptor Pmu3358_02955 PF00290 Tryptophan synthase alpha chain Pmu3358_02960 PF00291 Pyridoxal-phosphate dependent enzyme Pmu3358_02965 PF00106 short chain dehydrogenase Pmu3358_02970 PF00218 Indole-3-glycerol phosphate synthase Pmu3358_02970 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase Pmu3358_02975 PF00591 Glycosyl transferase family, a/b domain Pmu3358_02975 PF02885 Glycosyl transferase family, helical bundle domain Pmu3358_02985 PF00117 Glutamine amidotransferase class-I Pmu3358_02990 PF00425 chorismate binding enzyme Pmu3358_02990 PF04715 Anthranilate synthase component I, N terminal region Pmu3358_02995 PF08496 Peptidase family S49 N-terminal Pmu3358_02995 PF01343 Peptidase family S49 Pmu3358_03000 PF00691 OmpA family Pmu3358_03000 PF01389 OmpA-like transmembrane domain Pmu3358_03010 PF00474 Sodium:solute symporter family Pmu3358_03015 PF00171 Aldehyde dehydrogenase family Pmu3358_03015 PF14850 DNA-binding domain of Proline dehydrogenase Pmu3358_03015 PF18327 Proline utilization A proline dehydrogenase N-terminal domain Pmu3358_03015 PF01619 Proline dehydrogenase Pmu3358_03030 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Pmu3358_03035 PF02824 TGS domain Pmu3358_03035 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Pmu3358_03035 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain Pmu3358_03035 PF03129 Anticodon binding domain Pmu3358_03040 PF01925 Sulfite exporter TauE/SafE Pmu3358_03045 PF00474 Sodium:solute symporter family Pmu3358_03050 PF16347 Domain of unknown function (DUF4976) Pmu3358_03055 PF00027 Cyclic nucleotide-binding domain Pmu3358_03060 PF04055 Radical SAM superfamily Pmu3358_03060 PF13186 Iron-sulfur cluster-binding domain Pmu3358_03065 PF01263 Aldose 1-epimerase Pmu3358_03070 PF05198 Translation initiation factor IF-3, N-terminal domain Pmu3358_03070 PF00707 Translation initiation factor IF-3, C-terminal domain Pmu3358_03075 PF01632 Ribosomal protein L35 Pmu3358_03080 PF00453 Ribosomal protein L20 Pmu3358_03090 PF01625 Peptide methionine sulfoxide reductase Pmu3358_03095 PF01171 PP-loop family Pmu3358_03100 PF03882 MukF winged-helix domain Pmu3358_03100 PF17192 MukF middle domain Pmu3358_03100 PF17193 MukF C-terminal domain Pmu3358_03105 PF04288 MukE-like family Pmu3358_03110 PF16330 MukB hinge domain Pmu3358_03110 PF04310 MukB N-terminal Pmu3358_03120 PF08411 Exonuclease C-terminal Pmu3358_03120 PF00929 Exonuclease Pmu3358_03125 PF05957 Bacterial protein of unknown function (DUF883) Pmu3358_03130 PF07332 Putative Actinobacterial Holin-X, holin superfamily III Pmu3358_03140 PF01131 DNA topoisomerase Pmu3358_03140 PF08272 Topoisomerase I zinc-ribbon-like Pmu3358_03140 PF01751 Toprim domain Pmu3358_03140 PF01396 Topoisomerase DNA binding C4 zinc finger Pmu3358_03145 PF02811 PHP domain Pmu3358_03150 PF01180 Dihydroorotate dehydrogenase Pmu3358_03155 PF11940 Domain of unknown function (DUF3458) Ig-like fold Pmu3358_03155 PF17432 Domain of unknown function (DUF3458_C) ARM repeats Pmu3358_03155 PF01433 Peptidase family M1 domain Pmu3358_03160 PF00731 AIR carboxylase Pmu3358_03165 PF02222 ATP-grasp domain Pmu3358_03165 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain Pmu3358_03170 PF00155 Aminotransferase class I and II Pmu3358_03175 PF02391 MoaE protein Pmu3358_03180 PF02597 ThiS family Pmu3358_03185 PF01967 MoaC family Pmu3358_03190 PF06463 Molybdenum Cofactor Synthesis C Pmu3358_03190 PF04055 Radical SAM superfamily Pmu3358_03195 PF01933 Uncharacterised protein family UPF0052 Pmu3358_03200 PF00877 NlpC/P60 family Pmu3358_03205 PF00216 Bacterial DNA-binding protein Pmu3358_03210 PF03147 Ferredoxin-fold anticodon binding domain Pmu3358_03210 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain Pmu3358_03210 PF03483 B3/4 domain Pmu3358_03210 PF03484 tRNA synthetase B5 domain Pmu3358_03210 PF01588 Putative tRNA binding domain Pmu3358_03220 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain Pmu3358_03220 PF01409 tRNA synthetases class II core domain (F) Pmu3358_03230 PF00849 RNA pseudouridylate synthase Pmu3358_03235 PF00300 Histidine phosphatase superfamily (branch 1) Pmu3358_03240 PF08245 Mur ligase middle domain Pmu3358_03245 PF01039 Carboxyl transferase domain Pmu3358_03245 PF17848 Acetyl-coA carboxylase zinc finger domain Pmu3358_03250 PF01416 tRNA pseudouridine synthase Pmu3358_03260 PF01386 Ribosomal L25p family Pmu3358_03265 PF09335 SNARE associated Golgi protein Pmu3358_03275 PF00480 ROK family Pmu3358_03280 PF01336 OB-fold nucleic acid binding domain Pmu3358_03280 PF00152 tRNA synthetases class II (D, K and N) Pmu3358_03285 PF06832 Penicillin-Binding Protein C-terminus Family Pmu3358_03285 PF00912 Transglycosylase Pmu3358_03285 PF00905 Penicillin binding protein transpeptidase domain Pmu3358_03290 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Pmu3358_03295 PF04348 LppC putative lipoprotein Pmu3358_03300 PF02021 Uncharacterised protein family UPF0102 Pmu3358_03305 PF13580 SIS domain Pmu3358_03310 PF04972 BON domain Pmu3358_03315 PF00677 Lumazine binding domain Pmu3358_03320 PF01554 MatE Pmu3358_03325 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Pmu3358_03325 PF02894 Oxidoreductase family, C-terminal alpha/beta domain Pmu3358_03330 PF00224 Pyruvate kinase, barrel domain Pmu3358_03330 PF02887 Pyruvate kinase, alpha/beta domain Pmu3358_03340 PF00313 'Cold-shock' DNA-binding domain Pmu3358_03345 PF09313 Domain of unknown function (DUF1971) Pmu3358_03345 PF03848 Tellurite resistance protein TehB Pmu3358_03355 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal Pmu3358_03355 PF14602 Hexapeptide repeat of succinyl-transferase Pmu3358_03355 PF00132 Bacterial transferase hexapeptide (six repeats) Pmu3358_03360 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain Pmu3358_03360 PF01835 MG2 domain Pmu3358_03360 PF17962 Bacterial macroglobulin domain 6 Pmu3358_03360 PF00207 Alpha-2-macroglobulin family Pmu3358_03360 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain Pmu3358_03360 PF11974 Bacterial alpha-2-macroglobulin MG3 domain Pmu3358_03360 PF07703 Alpha-2-macroglobulin bait region domain Pmu3358_03365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Pmu3358_03365 PF03466 LysR substrate binding domain Pmu3358_03370 PF00849 RNA pseudouridylate synthase Pmu3358_03370 PF01479 S4 domain Pmu3358_03375 PF01300 Telomere recombination Pmu3358_03380 PF13859 BNR repeat-like domain Pmu3358_03385 PF01817 Chorismate mutase type II Pmu3358_03385 PF02153 Prephenate dehydrogenase Pmu3358_03390 PF00793 DAHP synthetase I family Pmu3358_03395 PF00210 Ferritin-like domain Pmu3358_03400 PF00210 Ferritin-like domain Pmu3358_03405 PF00027 Cyclic nucleotide-binding domain Pmu3358_03405 PF13545 Crp-like helix-turn-helix domain Pmu3358_03410 PF00582 Universal stress protein family Pmu3358_03415 PF07361 Cytochrome b562 Pmu3358_03420 PF01343 Peptidase family S49 Pmu3358_03425 PF00881 Nitroreductase family Pmu3358_03440 PF00480 ROK family Pmu3358_03445 PF01569 PAP2 superfamily Pmu3358_03450 PF00925 GTP cyclohydrolase II Pmu3358_03455 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Pmu3358_03460 PF04304 Protein of unknown function (DUF454) Pmu3358_03465 PF01432 Peptidase family M3 Pmu3358_03490 PF01047 MarR family Pmu3358_03490 PF00480 ROK family Pmu3358_03495 PF01488 Shikimate / quinate 5-dehydrogenase Pmu3358_03495 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain Pmu3358_03495 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain Pmu3358_03500 PF16123 Hydroxyacylglutathione hydrolase C-terminus Pmu3358_03500 PF00753 Metallo-beta-lactamase superfamily Pmu3358_03505 PF08241 Methyltransferase domain Pmu3358_03510 PF18381 YcaO cyclodehydratase C-terminal domain Pmu3358_03510 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding Pmu3358_03515 PF06295 Protein of unknown function (DUF1043) Pmu3358_03525 PF05117 Family of unknown function (DUF695) Pmu3358_03525 PF06877 Regulator of ribonuclease activity B Pmu3358_03530 PF03372 Endonuclease/Exonuclease/phosphatase family Pmu3358_03535 PF13193 AMP-binding enzyme C-terminal domain Pmu3358_03535 PF00501 AMP-binding enzyme Pmu3358_03535 PF16177 Acetyl-coenzyme A synthetase N-terminus Pmu3358_03540 PF01227 GTP cyclohydrolase I Pmu3358_03545 PF03454 MoeA C-terminal region (domain IV) Pmu3358_03545 PF00994 Probable molybdopterin binding domain Pmu3358_03545 PF03453 MoeA N-terminal region (domain I and II) Pmu3358_03550 PF00899 ThiF family Pmu3358_03555 PF02441 Flavoprotein Pmu3358_03560 PF00156 Phosphoribosyl transferase domain Pmu3358_03565 PF02674 Colicin V production protein Pmu3358_03570 PF04217 Protein of unknown function, DUF412 Pmu3358_03575 PF00871 Acetokinase family Pmu3358_03580 PF01515 Phosphate acetyl/butaryl transferase Pmu3358_03580 PF07085 DRTGG domain Pmu3358_03585 PF00570 HRDC domain Pmu3358_03585 PF01612 3'-5' exonuclease Pmu3358_03590 PF13193 AMP-binding enzyme C-terminal domain Pmu3358_03590 PF00501 AMP-binding enzyme Pmu3358_03595 PF03843 Outer membrane lipoprotein Slp family Pmu3358_03600 PF00814 Glycoprotease family Pmu3358_03605 PF13307 Helicase C-terminal domain Pmu3358_03605 PF06733 DEAD_2 Pmu3358_03610 PF01263 Aldose 1-epimerase Pmu3358_03620 PF01985 CRS1 / YhbY (CRM) domain Pmu3358_03630 PF03449 Transcription elongation factor, N-terminal Pmu3358_03630 PF01272 Transcription elongation factor, GreA/GreB, C-term Pmu3358_03635 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family Pmu3358_03640 PF03477 ATP cone domain Pmu3358_03640 PF02867 Ribonucleotide reductase, barrel domain Pmu3358_03640 PF00317 Ribonucleotide reductase, all-alpha domain Pmu3358_03645 PF00209 Sodium:neurotransmitter symporter family Pmu3358_03655 PF00268 Ribonucleotide reductase, small chain Pmu3358_03660 PF00111 2Fe-2S iron-sulfur cluster binding domain Pmu3358_03680 PF02627 Carboxymuconolactone decarboxylase family Pmu3358_03690 PF04224 Protein of unknown function, DUF417 Pmu3358_03710 PF01113 Dihydrodipicolinate reductase, N-terminus Pmu3358_03710 PF05173 Dihydrodipicolinate reductase, C-terminus Pmu3358_03715 PF01810 LysE type translocator Pmu3358_03720 PF04608 Phosphatidylglycerophosphatase A Pmu3358_03725 PF02769 AIR synthase related protein, C-terminal domain Pmu3358_03725 PF00586 AIR synthase related protein, N-terminal domain Pmu3358_03730 PF01029 NusB family Pmu3358_03735 PF00885 6,7-dimethyl-8-ribityllumazine synthase Pmu3358_03740 PF03222 Tryptophan/tyrosine permease family Pmu3358_03745 PF00881 Nitroreductase family Pmu3358_03750 PF00595 PDZ domain Pmu3358_03755 PF06097 Bacterial protein of unknown function (DUF945) Pmu3358_03760 PF00012 Hsp70 protein Pmu3358_03770 PF01053 Cys/Met metabolism PLP-dependent enzyme Pmu3358_03780 PF01556 DnaJ C terminal domain Pmu3358_03780 PF00226 DnaJ domain Pmu3358_03780 PF00684 DnaJ central domain Pmu3358_03785 PF07715 TonB-dependent Receptor Plug Domain Pmu3358_03785 PF04886 PT repeat Pmu3358_03785 PF00593 TonB dependent receptor Pmu3358_03790 PF03459 TOBE domain Pmu3358_03790 PF00005 ABC transporter Pmu3358_03795 PF00528 Binding-protein-dependent transport system inner membrane component Pmu3358_03810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Pmu3358_03810 PF03459 TOBE domain Pmu3358_03820 PF13180 PDZ domain Pmu3358_03825 PF01872 RibD C-terminal domain Pmu3358_03825 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region Pmu3358_03830 PF03477 ATP cone domain Pmu3358_03840 PF02233 NAD(P) transhydrogenase beta subunit Pmu3358_03845 PF01262 Alanine dehydrogenase/PNT, C-terminal domain Pmu3358_03845 PF05222 Alanine dehydrogenase/PNT, N-terminal domain Pmu3358_03845 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch Pmu3358_03850 PF17746 SfsA N-terminal OB domain Pmu3358_03850 PF03749 Sugar fermentation stimulation protein RE domain Pmu3358_03860 PF01479 S4 domain Pmu3358_03860 PF00579 tRNA synthetases class I (W and Y) Pmu3358_03870 PF01509 TruB family pseudouridylate synthase (N terminal domain) Pmu3358_03870 PF16198 tRNA pseudouridylate synthase B C-terminal domain Pmu3358_03870 PF09157 Pseudouridine synthase II TruB, C-terminal Pmu3358_03875 PF02033 Ribosome-binding factor A Pmu3358_03885 PF00009 Elongation factor Tu GTP binding domain Pmu3358_03885 PF11987 Translation-initiation factor 2 Pmu3358_03885 PF04760 Translation initiation factor IF-2, N-terminal region Pmu3358_03885 PF08364 Bacterial translation initiation factor IF-2 associated region Pmu3358_03890 PF00575 S1 RNA binding domain Pmu3358_03890 PF08529 NusA N-terminal domain Pmu3358_03890 PF13184 NusA-like KH domain Pmu3358_03895 PF17384 RimP C-terminal SH3 domain Pmu3358_03895 PF02576 RimP N-terminal domain Pmu3358_03905 PF00455 DeoR C terminal sensor domain Pmu3358_03905 PF08220 DeoR-like helix-turn-helix domain Pmu3358_03915 PF03611 PTS system sugar-specific permease component Pmu3358_03920 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 Pmu3358_03925 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family Pmu3358_03945 PF00270 DEAD/DEAH box helicase Pmu3358_03945 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold Pmu3358_03945 PF00271 Helicase conserved C-terminal domain Pmu3358_03945 PF04408 Helicase associated domain (HA2) Pmu3358_03945 PF11898 Domain of unknown function (DUF3418) Pmu3358_03950 PF04241 Protein of unknown function (DUF423) Pmu3358_03955 PF04284 Protein of unknown function (DUF441) Pmu3358_03960 PF05159 Capsule polysaccharide biosynthesis protein Pmu3358_03965 PF05159 Capsule polysaccharide biosynthesis protein Pmu3358_03975 PF00535 Glycosyl transferase family 2 Pmu3358_03980 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain Pmu3358_03980 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Pmu3358_03980 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain Pmu3358_03985 PF00535 Glycosyl transferase family 2 Pmu3358_03990 PF02563 Polysaccharide biosynthesis/export protein Pmu3358_04000 PF01061 ABC-2 type transporter Pmu3358_04005 PF00005 ABC transporter Pmu3358_04010 PF00462 Glutaredoxin Pmu3358_04015 PF04536 TPM domain Pmu3358_04025 PF04011 LemA family Pmu3358_04030 PF00691 OmpA family Pmu3358_04030 PF01389 OmpA-like transmembrane domain Pmu3358_04035 PF13183 4Fe-4S dicluster domain Pmu3358_04035 PF02913 FAD linked oxidases, C-terminal domain Pmu3358_04035 PF01565 FAD binding domain Pmu3358_04040 PF03061 Thioesterase superfamily Pmu3358_04045 PF00762 Ferrochelatase Pmu3358_04050 PF02769 AIR synthase related protein, C-terminal domain Pmu3358_04050 PF00586 AIR synthase related protein, N-terminal domain Pmu3358_04055 PF01202 Shikimate kinase Pmu3358_04060 PF00356 Bacterial regulatory proteins, lacI family Pmu3358_04065 PF08240 Alcohol dehydrogenase GroES-like domain Pmu3358_04065 PF00107 Zinc-binding dehydrogenase Pmu3358_04070 PF00106 short chain dehydrogenase Pmu3358_04075 PF03480 Bacterial extracellular solute-binding protein, family 7 Pmu3358_04085 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component Pmu3358_04090 PF01053 Cys/Met metabolism PLP-dependent enzyme Pmu3358_04095 PF10417 C-terminal domain of 1-Cys peroxiredoxin Pmu3358_04095 PF00578 AhpC/TSA family Pmu3358_04100 PF01253 Translation initiation factor SUI1 Pmu3358_04105 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family Pmu3358_04110 PF18073 Rubredoxin metal binding domain Pmu3358_04120 PF06305 Lipopolysaccharide assembly protein A domain Pmu3358_04125 PF00216 Bacterial DNA-binding protein Pmu3358_04130 PF00575 S1 RNA binding domain Pmu3358_04135 PF02224 Cytidylate kinase Pmu3358_04140 PF07715 TonB-dependent Receptor Plug Domain Pmu3358_04145 PF05193 Peptidase M16 inactive domain Pmu3358_04145 PF00675 Insulinase (Peptidase family M16) Pmu3358_04155 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain Pmu3358_04155 PF01276 Orn/Lys/Arg decarboxylase, major domain Pmu3358_04155 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain Pmu3358_04160 PF13520 Amino acid permease Pmu3358_04165 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain Pmu3358_04165 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain Pmu3358_04170 PF04393 Protein of unknown function (DUF535) Pmu3358_04175 PF03222 Tryptophan/tyrosine permease family Pmu3358_04180 PF01212 Beta-eliminating lyase Pmu3358_04190 PF00764 Arginosuccinate synthase Pmu3358_04195 PF01370 NAD dependent epimerase/dehydratase family Pmu3358_04200 PF01259 SAICAR synthetase Pmu3358_04210 PF00009 Elongation factor Tu GTP binding domain Pmu3358_04210 PF16658 Class II release factor RF3, C-terminal domain Pmu3358_04210 PF03144 Elongation factor Tu domain 2 Pmu3358_04215 PF00210 Ferritin-like domain Pmu3358_04220 PF08264 Anticodon-binding domain of tRNA Pmu3358_04220 PF00133 tRNA synthetases class I (I, L, M and V) Pmu3358_04220 PF10458 Valyl tRNA synthetase tRNA binding arm Pmu3358_04230 PF08534 Redoxin Pmu3358_04245 PF04364 DNA polymerase III chi subunit, HolC Pmu3358_04250 PF10415 Fumarase C C-terminus Pmu3358_04250 PF00206 Lyase Pmu3358_04255 PF16036 Chalcone isomerase-like Pmu3358_04260 PF05728 Uncharacterised protein family (UPF0227) Pmu3358_04265 PF08443 RimK-like ATP-grasp domain Pmu3358_04265 PF18030 RimK PreATP-grasp domain Pmu3358_04270 PF00462 Glutaredoxin Pmu3358_04275 PF00696 Amino acid kinase family Pmu3358_04275 PF00583 Acetyltransferase (GNAT) family Pmu3358_04280 PF01238 Phosphomannose isomerase type I Pmu3358_04285 PF06173 Protein of unknown function (DUF986) Pmu3358_04290 PF13609 Gram-negative porin Pmu3358_04295 PF03613 PTS system mannose/fructose/sorbose family IID component Pmu3358_04300 PF03609 PTS system sorbose-specific iic component Pmu3358_04305 PF03610 PTS system fructose IIA component Pmu3358_04305 PF03830 PTS system sorbose subfamily IIB component Pmu3358_04310 PF07690 Major Facilitator Superfamily Pmu3358_04315 PF04363 Protein of unknown function (DUF496) Pmu3358_04320 PF00266 Aminotransferase class-V Pmu3358_04325 PF00155 Aminotransferase class I and II Pmu3358_04330 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) Pmu3358_04340 PF03989 DNA gyrase C-terminal domain, beta-propeller Pmu3358_04340 PF00521 DNA gyrase/topoisomerase IV, subunit A Pmu3358_04345 PF04247 Invasion gene expression up-regulator, SirB Pmu3358_04380 PF00437 Type II/IV secretion system protein Pmu3358_04395 PF00263 Bacterial type II and III secretion system protein Pmu3358_04395 PF03958 Bacterial type II/III secretion system short domain Pmu3358_04425 PF01066 CDP-alcohol phosphatidyltransferase Pmu3358_04430 PF02151 UvrB/uvrC motif Pmu3358_04430 PF08459 UvrC Helix-hairpin-helix N-terminal Pmu3358_04430 PF01541 GIY-YIG catalytic domain Pmu3358_04435 PF02348 Cytidylyltransferase Pmu3358_04440 PF03966 Trm112p-like protein Pmu3358_04445 PF02606 Tetraacyldisaccharide-1-P 4'-kinase Pmu3358_04450 PF00005 ABC transporter Pmu3358_04450 PF00664 ABC transporter transmembrane region Pmu3358_04455 PF13567 Domain of unknown function (DUF4131) Pmu3358_04455 PF00753 Metallo-beta-lactamase superfamily Pmu3358_04455 PF03772 Competence protein Pmu3358_04460 PF01258 Prokaryotic dksA/traR C4-type zinc finger Pmu3358_04465 PF12626 Polymerase A arginine-rich C-terminus Pmu3358_04465 PF01743 Poly A polymerase head domain Pmu3358_04465 PF12627 Probable RNA and SrmB- binding site of polymerase A Pmu3358_04470 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) Pmu3358_04475 PF00561 alpha/beta hydrolase fold Pmu3358_04480 PF02698 DUF218 domain Pmu3358_04485 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family Pmu3358_04485 PF00356 Bacterial regulatory proteins, lacI family Pmu3358_04490 PF10369 Small subunit of acetolactate synthase Pmu3358_04495 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Pmu3358_04495 PF00205 Thiamine pyrophosphate enzyme, central domain Pmu3358_04495 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Pmu3358_04500 PF03553 Na+/H+ antiporter family Pmu3358_04505 PF00816 H-NS histone family Pmu3358_04510 PF00551 Formyl transferase Pmu3358_04510 PF01842 ACT domain Pmu3358_04515 PF01979 Amidohydrolase family Pmu3358_04520 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase Pmu3358_04530 PF00367 phosphotransferase system, EIIB Pmu3358_04530 PF02378 Phosphotransferase system, EIIC Pmu3358_04530 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 Pmu3358_04540 PF13286 Phosphohydrolase-associated domain Pmu3358_04540 PF01966 HD domain Pmu3358_04545 PF04172 LrgB-like family Pmu3358_04550 PF03788 LrgA family Pmu3358_04555 PF00565 Staphylococcal nuclease homologue Pmu3358_04560 PF00266 Aminotransferase class-V Pmu3358_04565 PF02657 Fe-S metabolism associated domain Pmu3358_04570 PF01467 Cytidylyltransferase-like Pmu3358_04570 PF00294 pfkB family carbohydrate kinase Pmu3358_04575 PF03279 Bacterial lipid A biosynthesis acyltransferase Pmu3358_04585 PF02525 Flavodoxin-like fold Pmu3358_04595 PF16200 C-terminal region of band_7 Pmu3358_04595 PF01145 SPFH domain / Band 7 family Pmu3358_04600 PF00005 ABC transporter Pmu3358_04605 PF00375 Sodium:dicarboxylate symporter family Pmu3358_04610 PF00717 Peptidase S24-like Pmu3358_04615 PF07992 Pyridine nucleotide-disulphide oxidoreductase Pmu3358_04615 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Pmu3358_04620 PF02817 e3 binding domain Pmu3358_04620 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) Pmu3358_04620 PF00364 Biotin-requiring enzyme Pmu3358_04625 PF17831 Pyruvate dehydrogenase E1 component middle domain Pmu3358_04625 PF00456 Transketolase, thiamine diphosphate binding domain Pmu3358_04630 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 Pmu3358_04635 PF02896 PEP-utilising enzyme, TIM barrel domain Pmu3358_04635 PF05524 PEP-utilising enzyme, N-terminal Pmu3358_04635 PF00391 PEP-utilising enzyme, mobile domain Pmu3358_04640 PF00381 PTS HPr component phosphorylation site Pmu3358_04645 PF03193 RsgA GTPase Pmu3358_04650 PF00929 Exonuclease Pmu3358_04660 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE Pmu3358_04665 PF01476 LysM domain Pmu3358_04665 PF01520 N-acetylmuramoyl-L-alanine amidase Pmu3358_04670 PF01119 DNA mismatch repair protein, C-terminal domain Pmu3358_04670 PF08676 MutL C terminal dimerisation domain Pmu3358_04680 PF17209 Hfq protein Pmu3358_04685 PF16360 GTP-binding GTPase Middle Region Pmu3358_04685 PF01926 50S ribosome-binding GTPase Pmu3358_04685 PF13167 GTP-binding GTPase N-terminal Pmu3358_04690 PF18024 Helix-turn-helix domain Pmu3358_04690 PF00158 Sigma-54 interaction domain Pmu3358_04695 PF05128 Domain of unknown function (DUF697) Pmu3358_04700 PF04317 YcjX-like family, DUF463 Pmu3358_04705 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Pmu3358_04710 PF00528 Binding-protein-dependent transport system inner membrane component Pmu3358_04715 PF12911 N-terminal TM domain of oligopeptide transport permease C Pmu3358_04715 PF00528 Binding-protein-dependent transport system inner membrane component Pmu3358_04720 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Pmu3358_04720 PF00005 ABC transporter Pmu3358_04725 PF00005 ABC transporter Pmu3358_04740 PF03099 Biotin/lipoate A/B protein ligase family Pmu3358_04740 PF02237 Biotin protein ligase C terminal domain Pmu3358_04745 PF00478 IMP dehydrogenase / GMP reductase domain Pmu3358_04745 PF00571 CBS domain Pmu3358_04755 PF00117 Glutamine amidotransferase class-I Pmu3358_04755 PF02540 NAD synthase Pmu3358_04755 PF00958 GMP synthase C terminal domain Pmu3358_04765 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit Pmu3358_04770 PF16142 Domain of unknown function (DUF4850) Pmu3358_04775 PF08543 Phosphomethylpyrimidine kinase Pmu3358_04780 PF11734 TilS substrate C-terminal domain Pmu3358_04780 PF01171 PP-loop family Pmu3358_04780 PF09179 TilS substrate binding domain Pmu3358_04785 PF01070 FMN-dependent dehydrogenase Pmu3358_04795 PF16363 GDP-mannose 4,6 dehydratase Pmu3358_04800 PF07690 Major Facilitator Superfamily Pmu3358_04805 PF05191 Adenylate kinase, active site lid Pmu3358_04810 PF02629 CoA binding domain Pmu3358_04810 PF00549 CoA-ligase Pmu3358_04815 PF08442 ATP-grasp domain Pmu3358_04815 PF00549 CoA-ligase Pmu3358_04825 PF02817 e3 binding domain Pmu3358_04825 PF00364 Biotin-requiring enzyme Pmu3358_04825 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) Pmu3358_04830 PF16870 2-oxoglutarate dehydrogenase C-terminal Pmu3358_04830 PF00676 Dehydrogenase E1 component Pmu3358_04830 PF16078 2-oxoglutarate dehydrogenase N-terminus Pmu3358_04830 PF02779 Transketolase, pyrimidine binding domain Pmu3358_04835 PF00285 Citrate synthase, C-terminal domain Pmu3358_04840 PF03480 Bacterial extracellular solute-binding protein, family 7 Pmu3358_04845 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component Pmu3358_04850 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component Pmu3358_04855 PF00753 Metallo-beta-lactamase superfamily Pmu3358_04860 PF05951 Bacterial protein of unknown function (DUF882) Pmu3358_04865 PF03734 L,D-transpeptidase catalytic domain Pmu3358_04870 PF00595 PDZ domain Pmu3358_04870 PF03572 Peptidase family S41 Pmu3358_04870 PF11818 C-terminal domain of tail specific protease (DUF3340) Pmu3358_04870 PF17804 Tail specific protease N-terminal domain Pmu3358_04875 PF04352 ProQ/FINO family Pmu3358_04875 PF17516 ProQ C-terminal domain Pmu3358_04880 PF04403 Paraquat-inducible protein A Pmu3358_04885 PF02470 MlaD protein Pmu3358_04890 PF01546 Peptidase family M20/M25/M40 Pmu3358_04890 PF07687 Peptidase dimerisation domain Pmu3358_04895 PF00005 ABC transporter Pmu3358_04895 PF08402 TOBE domain Pmu3358_04900 PF00528 Binding-protein-dependent transport system inner membrane component Pmu3358_04905 PF00528 Binding-protein-dependent transport system inner membrane component Pmu3358_04910 PF13416 Bacterial extracellular solute-binding protein Pmu3358_04915 PF13416 Bacterial extracellular solute-binding protein Pmu3358_04920 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region Pmu3358_04920 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region Pmu3358_04925 PF02403 Seryl-tRNA synthetase N-terminal domain Pmu3358_04925 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Pmu3358_04930 PF00004 ATPase family associated with various cellular activities (AAA) Pmu3358_04930 PF12002 MgsA AAA+ ATPase C terminal Pmu3358_04930 PF16193 AAA C-terminal domain Pmu3358_04935 PF03548 Outer membrane lipoprotein carrier protein LolA Pmu3358_04940 PF13491 4TM region of DNA translocase FtsK/SpoIIIE Pmu3358_04940 PF17854 FtsK alpha domain Pmu3358_04940 PF01580 FtsK/SpoIIIE family Pmu3358_04940 PF09397 Ftsk gamma domain Pmu3358_04945 PF01037 Lrp/AsnC ligand binding domain Pmu3358_04955 PF18073 Rubredoxin metal binding domain Pmu3358_04960 PF01928 CYTH domain Pmu3358_04965 PF01865 Protein of unknown function DUF47 Pmu3358_04970 PF01384 Phosphate transporter family Pmu3358_04975 PF08239 Bacterial SH3 domain Pmu3358_04980 PF01966 HD domain Pmu3358_04980 PF01743 Poly A polymerase head domain Pmu3358_04980 PF12627 Probable RNA and SrmB- binding site of polymerase A Pmu3358_04985 PF03550 Outer membrane lipoprotein LolB Pmu3358_04990 PF08544 GHMP kinases C terminal Pmu3358_04990 PF00288 GHMP kinases N terminal domain Pmu3358_04995 PF14572 Phosphoribosyl synthetase-associated domain Pmu3358_04995 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase Pmu3358_05000 PF01551 Peptidase family M23 Pmu3358_05000 PF04225 Opacity-associated protein A LysM-like domain Pmu3358_05005 PF00005 ABC transporter Pmu3358_05010 PF00950 ABC 3 transport family Pmu3358_05015 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Pmu3358_05015 PF00005 ABC transporter Pmu3358_05020 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Pmu3358_05020 PF00005 ABC transporter Pmu3358_05025 PF12911 N-terminal TM domain of oligopeptide transport permease C Pmu3358_05025 PF00528 Binding-protein-dependent transport system inner membrane component Pmu3358_05030 PF00528 Binding-protein-dependent transport system inner membrane component Pmu3358_05035 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Pmu3358_05040 PF02219 Methylenetetrahydrofolate reductase Pmu3358_05065 PF02547 Queuosine biosynthesis protein Pmu3358_05080 PF01702 Queuine tRNA-ribosyltransferase Pmu3358_05085 PF02699 Preprotein translocase subunit Pmu3358_05090 PF13721 SecD export protein N-terminal TM region Pmu3358_05090 PF07549 SecD/SecF GG Motif Pmu3358_05090 PF02355 Protein export membrane protein Pmu3358_05095 PF02355 Protein export membrane protein Pmu3358_05095 PF07549 SecD/SecF GG Motif Pmu3358_05100 PF00464 Serine hydroxymethyltransferase Pmu3358_05105 PF02843 Phosphoribosylglycinamide synthetase, C domain Pmu3358_05105 PF02844 Phosphoribosylglycinamide synthetase, N domain Pmu3358_05105 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain Pmu3358_05115 PF02142 MGS-like domain Pmu3358_05115 PF01808 AICARFT/IMPCHase bienzyme Pmu3358_05120 PF00085 Thioredoxin Pmu3358_05120 PF11412 Disulphide bond corrector protein DsbC Pmu3358_05120 PF02683 Cytochrome C biogenesis protein transmembrane region Pmu3358_05125 PF01197 Ribosomal protein L31 Pmu3358_05130 PF00444 Ribosomal protein L36 Pmu3358_05135 PF00486 Transcriptional regulatory protein, C terminal Pmu3358_05135 PF00072 Response regulator receiver domain Pmu3358_05140 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase Pmu3358_05145 PF01668 SmpB protein Pmu3358_05150 PF03459 TOBE domain Pmu3358_05155 PF08521 Two-component sensor kinase N-terminal Pmu3358_05155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Pmu3358_05155 PF00512 His Kinase A (phospho-acceptor) domain Pmu3358_05160 PF00486 Transcriptional regulatory protein, C terminal Pmu3358_05160 PF00072 Response regulator receiver domain Pmu3358_05165 PF07681 DoxX Pmu3358_05175 PF05114 Protein of unknown function (DUF692) Pmu3358_05180 PF09836 Putative DNA-binding domain Pmu3358_05190 PF04542 Sigma-70 region 2 Pmu3358_05190 PF08281 Sigma-70, region 4 Pmu3358_05200 PF03840 Preprotein translocase SecG subunit Pmu3358_05205 PF01751 Toprim domain Pmu3358_05205 PF01131 DNA topoisomerase Pmu3358_05210 PF13662 Toprim domain Pmu3358_05210 PF02132 RecR protein Pmu3358_05215 PF02575 YbaB/EbfC DNA-binding family Pmu3358_05220 PF11791 Aconitate B N-terminal domain Pmu3358_05220 PF00330 Aconitase family (aconitate hydratase) Pmu3358_05220 PF06434 Aconitate hydratase 2 N-terminus Pmu3358_05230 PF00152 tRNA synthetases class II (D, K and N) Pmu3358_05235 PF02910 Fumarate reductase flavoprotein C-term Pmu3358_05235 PF00890 FAD binding domain Pmu3358_05240 PF13085 2Fe-2S iron-sulfur cluster binding domain Pmu3358_05240 PF13183 4Fe-4S dicluster domain Pmu3358_05245 PF02300 Fumarate reductase subunit C Pmu3358_05250 PF02313 Fumarate reductase subunit D Pmu3358_05255 PF03739 Lipopolysaccharide export system permease LptF/LptG Pmu3358_05260 PF03739 Lipopolysaccharide export system permease LptF/LptG Pmu3358_05265 PF02789 Cytosol aminopeptidase family, N-terminal domain Pmu3358_05265 PF00883 Cytosol aminopeptidase family, catalytic domain Pmu3358_05270 PF01048 Phosphorylase superfamily Pmu3358_05280 PF02272 DHHA1 domain Pmu3358_05280 PF01368 DHH family Pmu3358_05280 PF17768 RecJ OB domain Pmu3358_05285 PF10411 Disulfide bond isomerase protein N-terminus Pmu3358_05285 PF13098 Thioredoxin-like domain Pmu3358_05295 PF00152 tRNA synthetases class II (D, K and N) Pmu3358_05295 PF01336 OB-fold nucleic acid binding domain Pmu3358_05310 PF06508 Queuosine biosynthesis protein QueC Pmu3358_05315 PF01242 6-pyruvoyl tetrahydropterin synthase Pmu3358_05320 PF04055 Radical SAM superfamily Pmu3358_05325 PF01784 NIF3 (NGG1p interacting factor 3) Pmu3358_05335 PF00575 S1 RNA binding domain Pmu3358_05335 PF00773 RNB domain Pmu3358_05335 PF08206 Ribonuclease B OB domain Pmu3358_05340 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) Pmu3358_05345 PF01722 BolA-like protein Pmu3358_05350 PF13466 STAS domain Pmu3358_05355 PF05494 MlaC protein Pmu3358_05360 PF02470 MlaD protein Pmu3358_05365 PF02405 Permease MlaE Pmu3358_05370 PF00005 ABC transporter Pmu3358_05375 PF06835 Lipopolysaccharide-assembly, LptC-related Pmu3358_05380 PF03968 OstA-like protein Pmu3358_05385 PF12399 Branched-chain amino acid ATP-binding cassette transporter Pmu3358_05385 PF00005 ABC transporter Pmu3358_05390 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 Pmu3358_05395 PF03668 P-loop ATPase protein family Pmu3358_05400 PF02601 Exonuclease VII, large subunit Pmu3358_05400 PF13742 OB-fold nucleic acid binding domain Pmu3358_05405 PF08007 Cupin superfamily protein Pmu3358_05410 PF03658 RnfH family Ubiquitin Pmu3358_05415 PF03364 Polyketide cyclase / dehydrase and lipid transport Pmu3358_05420 PF01195 Peptidyl-tRNA hydrolase Pmu3358_05425 PF01926 50S ribosome-binding GTPase Pmu3358_05425 PF06071 Protein of unknown function (DUF933) Pmu3358_05440 PF01546 Peptidase family M20/M25/M40 Pmu3358_05440 PF07687 Peptidase dimerisation domain Pmu3358_05445 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) Pmu3358_05450 PF08274 PhnA Zinc-Ribbon Pmu3358_05450 PF03831 PhnA domain Pmu3358_05455 PF05901 Excalibur calcium-binding domain Pmu3358_05460 PF05025 RbsD / FucU transport protein family Pmu3358_05465 PF00005 ABC transporter Pmu3358_05470 PF02653 Branched-chain amino acid transport system / permease component Pmu3358_05475 PF13407 Periplasmic binding protein domain Pmu3358_05480 PF00294 pfkB family carbohydrate kinase Pmu3358_05485 PF00356 Bacterial regulatory proteins, lacI family Pmu3358_05490 PF01817 Chorismate mutase type II Pmu3358_05490 PF00800 Prephenate dehydratase Pmu3358_05495 PF00465 Iron-containing alcohol dehydrogenase Pmu3358_05500 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase Pmu3358_05505 PF00091 Tubulin/FtsZ family, GTPase domain Pmu3358_05505 PF12327 FtsZ family, C-terminal domain Pmu3358_05515 PF08478 POTRA domain, FtsQ-type Pmu3358_05515 PF03799 Cell division protein FtsQ Pmu3358_05520 PF01820 D-ala D-ala ligase N-terminus Pmu3358_05520 PF07478 D-ala D-ala ligase C-terminus Pmu3358_05525 PF08245 Mur ligase middle domain Pmu3358_05525 PF02875 Mur ligase family, glutamate ligase domain Pmu3358_05525 PF01225 Mur ligase family, catalytic domain Pmu3358_05530 PF04101 Glycosyltransferase family 28 C-terminal domain Pmu3358_05530 PF03033 Glycosyltransferase family 28 N-terminal domain Pmu3358_05535 PF01098 Cell cycle protein Pmu3358_05540 PF02875 Mur ligase family, glutamate ligase domain Pmu3358_05540 PF08245 Mur ligase middle domain Pmu3358_05545 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 Pmu3358_05545 PF00953 Glycosyl transferase family 4 Pmu3358_05550 PF08245 Mur ligase middle domain Pmu3358_05550 PF02875 Mur ligase family, glutamate ligase domain Pmu3358_05550 PF01225 Mur ligase family, catalytic domain Pmu3358_05555 PF08245 Mur ligase middle domain Pmu3358_05555 PF01225 Mur ligase family, catalytic domain Pmu3358_05555 PF02875 Mur ligase family, glutamate ligase domain Pmu3358_05560 PF03717 Penicillin-binding Protein dimerisation domain Pmu3358_05560 PF00905 Penicillin binding protein transpeptidase domain Pmu3358_05565 PF04999 Cell division protein FtsL Pmu3358_05570 PF01795 MraW methylase family Pmu3358_05575 PF02381 MraZ protein, putative antitoxin-like Pmu3358_05580 PF02554 Carbon starvation protein CstA Pmu3358_05585 PF01497 Periplasmic binding protein Pmu3358_05590 PF01032 FecCD transport family Pmu3358_05595 PF01032 FecCD transport family Pmu3358_05600 PF00005 ABC transporter Pmu3358_05605 PF10571 Uncharacterised protein family UPF0547 Pmu3358_05610 PF00528 Binding-protein-dependent transport system inner membrane component Pmu3358_05615 PF00528 Binding-protein-dependent transport system inner membrane component Pmu3358_05620 PF00497 Bacterial extracellular solute-binding proteins, family 3 Pmu3358_05625 PF00005 ABC transporter Pmu3358_05630 PF13580 SIS domain Pmu3358_05635 PF00156 Phosphoribosyl transferase domain Pmu3358_05640 PF01523 Putative modulator of DNA gyrase Pmu3358_05650 PF01145 SPFH domain / Band 7 family Pmu3358_05655 PF01145 SPFH domain / Band 7 family Pmu3358_05660 PF01648 4'-phosphopantetheinyl transferase superfamily Pmu3358_05665 PF00291 Pyridoxal-phosphate dependent enzyme Pmu3358_05665 PF14821 Threonine synthase N terminus Pmu3358_05670 PF00288 GHMP kinases N terminal domain Pmu3358_05670 PF08544 GHMP kinases C terminal Pmu3358_05675 PF03447 Homoserine dehydrogenase, NAD binding domain Pmu3358_05675 PF01842 ACT domain Pmu3358_05675 PF00696 Amino acid kinase family Pmu3358_05675 PF13840 ACT domain Pmu3358_05675 PF00742 Homoserine dehydrogenase Pmu3358_05685 PF01168 Alanine racemase, N-terminal domain Pmu3358_05725 PF00075 RNase H Pmu3358_05730 PF00929 Exonuclease Pmu3358_05740 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal Pmu3358_05740 PF01926 50S ribosome-binding GTPase Pmu3358_05750 PF07732 Multicopper oxidase Pmu3358_05755 PF01553 Acyltransferase Pmu3358_05760 PF00149 Calcineurin-like phosphoesterase Pmu3358_05765 PF10063 Uncharacterized integral membrane protein (DUF2301) Pmu3358_05770 PF08207 Elongation factor P (EF-P) KOW-like domain Pmu3358_05770 PF09285 Elongation factor P, C-terminal Pmu3358_05770 PF01132 Elongation factor P (EF-P) OB domain Pmu3358_05775 PF04055 Radical SAM superfamily Pmu3358_05780 PF04225 Opacity-associated protein A LysM-like domain Pmu3358_05780 PF08525 Opacity-associated protein A N-terminal motif Pmu3358_05790 PF04381 Putative exonuclease, RdgC Pmu3358_05795 PF03807 NADP oxidoreductase coenzyme F420-dependent Pmu3358_05795 PF14748 Pyrroline-5-carboxylate reductase dimerisation Pmu3358_05800 PF12832 MFS_1 like family Pmu3358_05805 PF02899 Phage integrase, N-terminal SAM-like domain Pmu3358_05805 PF00589 Phage integrase family Pmu3358_05810 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein Pmu3358_05815 PF01235 Sodium:alanine symporter family Pmu3358_05825 PF03884 DNA gyrase inhibitor YacG Pmu3358_05830 PF01121 Dephospho-CoA kinase Pmu3358_05840 PF00482 Type II secretion system (T2SS), protein F Pmu3358_05845 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain Pmu3358_05845 PF00437 Type II/IV secretion system protein Pmu3358_05850 PF07963 Prokaryotic N-terminal methylation motif Pmu3358_05855 PF01510 N-acetylmuramoyl-L-alanine amidase Pmu3358_05860 PF00293 NUDIX domain Pmu3358_05865 PF01925 Sulfite exporter TauE/SafE Pmu3358_05870 PF01790 Prolipoprotein diacylglyceryl transferase Pmu3358_05875 PF00303 Thymidylate synthase Pmu3358_05880 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region Pmu3358_05885 PF04055 Radical SAM superfamily Pmu3358_05890 PF03797 Autotransporter beta-domain Pmu3358_05890 PF00657 GDSL-like Lipase/Acylhydrolase Pmu3358_05895 PF02901 Pyruvate formate lyase-like Pmu3358_05895 PF01228 Glycine radical Pmu3358_05900 PF01226 Formate/nitrite transporter Pmu3358_05905 PF01230 HIT domain Pmu3358_05915 PF00933 Glycosyl hydrolase family 3 N terminal domain Pmu3358_05920 PF05958 tRNA (Uracil-5-)-methyltransferase Pmu3358_05925 PF00365 Phosphofructokinase Pmu3358_05930 PF01545 Cation efflux family Pmu3358_05930 PF16916 Dimerisation domain of Zinc Transporter Pmu3358_05940 PF03883 Peroxide stress protein YaaA Pmu3358_05945 PF03167 Uracil DNA glycosylase superfamily Pmu3358_05950 PF01228 Glycine radical Pmu3358_05955 PF00679 Elongation factor G C-terminus Pmu3358_05955 PF00009 Elongation factor Tu GTP binding domain Pmu3358_05955 PF03144 Elongation factor Tu domain 2 Pmu3358_05955 PF06421 GTP-binding protein LepA C-terminus Pmu3358_05960 PF10502 Signal peptidase, peptidase S26 Pmu3358_05965 PF00035 Double-stranded RNA binding motif Pmu3358_05965 PF14622 Ribonuclease-III-like Pmu3358_05970 PF07650 KH domain Pmu3358_05970 PF01926 50S ribosome-binding GTPase Pmu3358_05980 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB Pmu3358_05980 PF08479 POTRA domain, ShlB-type Pmu3358_05980 PF17287 POTRA domain Pmu3358_05985 PF01926 50S ribosome-binding GTPase Pmu3358_05985 PF07650 KH domain Pmu3358_05995 PF08479 POTRA domain, ShlB-type Pmu3358_05995 PF17287 POTRA domain Pmu3358_05995 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB Pmu3358_06000 PF00561 alpha/beta hydrolase fold Pmu3358_06005 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Pmu3358_06005 PF16582 Middle domain of thiamine pyrophosphate Pmu3358_06005 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Pmu3358_06010 PF00425 chorismate binding enzyme Pmu3358_06015 PF00155 Aminotransferase class I and II Pmu3358_06030 PF00005 ABC transporter Pmu3358_06030 PF08402 TOBE domain Pmu3358_06035 PF00392 Bacterial regulatory proteins, gntR family Pmu3358_06035 PF07840 FadR C-terminal domain Pmu3358_06040 PF06450 Bacterial Na+/H+ antiporter B (NhaB) Pmu3358_06045 PF02600 Disulfide bond formation protein DsbB Pmu3358_06050 PF01464 Transglycosylase SLT domain Pmu3358_06050 PF00497 Bacterial extracellular solute-binding proteins, family 3 Pmu3358_06055 PF01914 MarC family integral membrane protein Pmu3358_06060 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain Pmu3358_06060 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase Pmu3358_06070 PF00005 ABC transporter Pmu3358_06070 PF06472 ABC transporter transmembrane region 2 Pmu3358_06085 PF13230 Glutamine amidotransferases class-II Pmu3358_06090 PF03222 Tryptophan/tyrosine permease family Pmu3358_06095 PF03315 Serine dehydratase beta chain Pmu3358_06095 PF03313 Serine dehydratase alpha chain Pmu3358_06100 PF06940 Domain of unknown function (DUF1287) Pmu3358_06105 PF07733 Bacterial DNA polymerase III alpha NTPase domain Pmu3358_06105 PF17657 Bacterial DNA polymerase III alpha subunit finger domain Pmu3358_06105 PF02811 PHP domain Pmu3358_06105 PF14579 Helix-hairpin-helix motif Pmu3358_06105 PF01336 OB-fold nucleic acid binding domain Pmu3358_06110 PF06628 Catalase-related immune-responsive Pmu3358_06110 PF00199 Catalase Pmu3358_06120 PF03918 Cytochrome C biogenesis protein Pmu3358_06125 PF03918 Cytochrome C biogenesis protein Pmu3358_06130 PF08534 Redoxin Pmu3358_06135 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal Pmu3358_06135 PF01578 Cytochrome C assembly protein Pmu3358_06140 PF03916 Polysulphide reductase, NrfD Pmu3358_06145 PF13247 4Fe-4S dicluster domain Pmu3358_06155 PF02335 Cytochrome c552 Pmu3358_06165 PF00586 AIR synthase related protein, N-terminal domain Pmu3358_06165 PF02769 AIR synthase related protein, C-terminal domain Pmu3358_06170 PF00551 Formyl transferase Pmu3358_06180 PF00860 Permease family Pmu3358_06185 PF00308 Bacterial dnaA protein Pmu3358_06200 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Pmu3358_06205 PF03918 Cytochrome C biogenesis protein Pmu3358_06210 PF03918 Cytochrome C biogenesis protein Pmu3358_06215 PF08534 Redoxin Pmu3358_06220 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal Pmu3358_06220 PF01578 Cytochrome C assembly protein Pmu3358_06225 PF03100 CcmE Pmu3358_06230 PF04995 Heme exporter protein D (CcmD) Pmu3358_06235 PF01578 Cytochrome C assembly protein Pmu3358_06240 PF03379 CcmB protein Pmu3358_06245 PF00005 ABC transporter Pmu3358_06250 PF00999 Sodium/hydrogen exchanger family Pmu3358_06250 PF02254 TrkA-N domain Pmu3358_06260 PF02678 Pirin Pmu3358_06260 PF05726 Pirin C-terminal cupin domain Pmu3358_06265 PF11941 Domain of unknown function (DUF3459) Pmu3358_06265 PF00128 Alpha amylase, catalytic domain Pmu3358_06275 PF02378 Phosphotransferase system, EIIC Pmu3358_06275 PF00367 phosphotransferase system, EIIB Pmu3358_06280 PF00356 Bacterial regulatory proteins, lacI family Pmu3358_06285 PF07690 Major Facilitator Superfamily Pmu3358_06290 PF00849 RNA pseudouridylate synthase Pmu3358_06290 PF01479 S4 domain Pmu3358_06295 PF03949 Malic enzyme, NAD binding domain Pmu3358_06295 PF01515 Phosphate acetyl/butaryl transferase Pmu3358_06295 PF00390 Malic enzyme, N-terminal domain Pmu3358_06300 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain Pmu3358_06300 PF02777 Iron/manganese superoxide dismutases, C-terminal domain Pmu3358_06305 PF00149 Calcineurin-like phosphoesterase Pmu3358_06305 PF02872 5'-nucleotidase, C-terminal domain Pmu3358_06310 PF04191 Phospholipid methyltransferase Pmu3358_06315 PF09976 Tetratricopeptide repeat-like domain Pmu3358_06320 PF13393 Histidyl-tRNA synthetase Pmu3358_06320 PF03129 Anticodon binding domain Pmu3358_06325 PF04551 GcpE protein Pmu3358_06330 PF13464 Domain of unknown function (DUF4115) Pmu3358_06340 PF04055 Radical SAM superfamily Pmu3358_06345 PF01594 AI-2E family transporter Pmu3358_06350 PF00543 Nitrogen regulatory protein P-II Pmu3358_06355 PF00994 Probable molybdopterin binding domain Pmu3358_06370 PF01066 CDP-alcohol phosphatidyltransferase Pmu3358_06375 PF02080 TrkA-C domain Pmu3358_06375 PF03600 Citrate transporter Pmu3358_06380 PF01351 Ribonuclease HII Pmu3358_06385 PF02684 Lipid-A-disaccharide synthetase Pmu3358_06390 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 Pmu3358_06390 PF00132 Bacterial transferase hexapeptide (six repeats) Pmu3358_06395 PF07977 FabA-like domain Pmu3358_06400 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD Pmu3358_06400 PF00132 Bacterial transferase hexapeptide (six repeats) Pmu3358_06405 PF03938 Outer membrane protein (OmpH-like) Pmu3358_06410 PF01103 Surface antigen Pmu3358_06410 PF07244 Surface antigen variable number repeat Pmu3358_06415 PF00595 PDZ domain Pmu3358_06415 PF17820 PDZ domain Pmu3358_06415 PF02163 Peptidase family M50 Pmu3358_06425 PF01255 Putative undecaprenyl diphosphate synthase Pmu3358_06430 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain Pmu3358_06430 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase Pmu3358_06430 PF13288 DXP reductoisomerase C-terminal domain Pmu3358_06435 PF01765 Ribosome recycling factor Pmu3358_06440 PF00696 Amino acid kinase family Pmu3358_06445 PF00889 Elongation factor TS Pmu3358_06450 PF00318 Ribosomal protein S2 Pmu3358_06455 PF13533 Biotin-lipoyl like Pmu3358_06460 PF00005 ABC transporter Pmu3358_06470 PF02321 Outer membrane efflux protein Pmu3358_06475 PF13145 PPIC-type PPIASE domain Pmu3358_06480 PF00004 ATPase family associated with various cellular activities (AAA) Pmu3358_06480 PF05362 Lon protease (S16) C-terminal proteolytic domain Pmu3358_06480 PF02190 ATP-dependent protease La (LON) substrate-binding domain Pmu3358_06485 PF06689 ClpX C4-type zinc finger Pmu3358_06485 PF10431 C-terminal, D2-small domain, of ClpB protein Pmu3358_06485 PF07724 AAA domain (Cdc48 subfamily) Pmu3358_06490 PF00574 Clp protease Pmu3358_06495 PF05697 Bacterial trigger factor protein (TF) Pmu3358_06495 PF05698 Bacterial trigger factor protein (TF) C-terminus Pmu3358_06495 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase Pmu3358_06500 PF01476 LysM domain Pmu3358_06505 PF04228 Putative neutral zinc metallopeptidase Pmu3358_06510 PF03608 PTS system enzyme II sorbitol-specific factor Pmu3358_06515 PF03612 Sorbitol phosphotransferase enzyme II N-terminus Pmu3358_06515 PF07663 Sorbitol phosphotransferase enzyme II C-terminus Pmu3358_06525 PF00106 short chain dehydrogenase Pmu3358_06530 PF06923 Glucitol operon activator protein (GutM) Pmu3358_06535 PF13419 Haloacid dehalogenase-like hydrolase Pmu3358_06540 PF13419 Haloacid dehalogenase-like hydrolase Pmu3358_06545 PF08220 DeoR-like helix-turn-helix domain Pmu3358_06545 PF00455 DeoR C terminal sensor domain Pmu3358_06550 PF00682 HMGL-like Pmu3358_06550 PF08502 LeuA allosteric (dimerisation) domain Pmu3358_06555 PF00180 Isocitrate/isopropylmalate dehydrogenase Pmu3358_06560 PF00330 Aconitase family (aconitate hydratase) Pmu3358_06565 PF00694 Aconitase C-terminal domain Pmu3358_06570 PF01243 Pyridoxamine 5'-phosphate oxidase Pmu3358_06575 PF04093 rod shape-determining protein MreD Pmu3358_06580 PF04085 rod shape-determining protein MreC Pmu3358_06590 PF08206 Ribonuclease B OB domain Pmu3358_06590 PF08461 Ribonuclease R winged-helix domain Pmu3358_06590 PF17876 Cold shock domain Pmu3358_06590 PF00575 S1 RNA binding domain Pmu3358_06590 PF00773 RNB domain Pmu3358_06595 PF08032 RNA 2'-O ribose methyltransferase substrate binding Pmu3358_06595 PF00588 SpoU rRNA Methylase family Pmu3358_06605 PF17760 UvrA interaction domain Pmu3358_06605 PF17755 UvrA DNA-binding domain Pmu3358_06610 PF00436 Single-strand binding protein family Pmu3358_06620 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain Pmu3358_06620 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain Pmu3358_06635 PF03895 YadA-like membrane anchor domain Pmu3358_06635 PF15401 Tryptophan-ring motif of head of Trimeric autotransporter adhesin Pmu3358_06635 PF13018 Extended Signal Peptide of Type V secretion system Pmu3358_06635 PF05662 Coiled stalk of trimeric autotransporter adhesin Pmu3358_06645 PF04055 Radical SAM superfamily Pmu3358_06645 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family Pmu3358_06650 PF03099 Biotin/lipoate A/B protein ligase family Pmu3358_06655 PF04359 Protein of unknown function (DUF493) Pmu3358_06660 PF07943 Penicillin-binding protein 5, C-terminal domain Pmu3358_06660 PF00768 D-alanyl-D-alanine carboxypeptidase Pmu3358_06665 PF03330 Lytic transglycolase Pmu3358_06665 PF05036 Sporulation related domain Pmu3358_06670 PF01098 Cell cycle protein Pmu3358_06675 PF03717 Penicillin-binding Protein dimerisation domain Pmu3358_06675 PF00905 Penicillin binding protein transpeptidase domain Pmu3358_06680 PF02590 Predicted SPOUT methyltransferase Pmu3358_06690 PF00270 DEAD/DEAH box helicase Pmu3358_06690 PF00271 Helicase conserved C-terminal domain Pmu3358_06695 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Pmu3358_06695 PF07497 Rho termination factor, RNA-binding domain Pmu3358_06695 PF07498 Rho termination factor, N-terminal domain Pmu3358_06705 PF03605 Anaerobic c4-dicarboxylate membrane transporter Pmu3358_06710 PF00550 Phosphopantetheine attachment site Pmu3358_06720 PF00698 Acyl transferase domain Pmu3358_06725 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal Pmu3358_06725 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III Pmu3358_06730 PF02504 Fatty acid synthesis protein Pmu3358_06735 PF01783 Ribosomal L32p protein family Pmu3358_06740 PF02620 Large ribosomal RNA subunit accumulation protein YceD Pmu3358_06745 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Pmu3358_06750 PF00528 Binding-protein-dependent transport system inner membrane component Pmu3358_06755 PF12911 N-terminal TM domain of oligopeptide transport permease C Pmu3358_06755 PF00528 Binding-protein-dependent transport system inner membrane component Pmu3358_06760 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Pmu3358_06760 PF00005 ABC transporter Pmu3358_06765 PF00005 ABC transporter Pmu3358_06765 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Pmu3358_06770 PF00194 Eukaryotic-type carbonic anhydrase Pmu3358_06780 PF08241 Methyltransferase domain Pmu3358_06785 PF04301 Protein of unknown function (DUF452) Pmu3358_06790 PF00155 Aminotransferase class I and II Pmu3358_06795 PF00202 Aminotransferase class-III Pmu3358_06800 PF02666 Phosphatidylserine decarboxylase Pmu3358_06805 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase Pmu3358_06805 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase Pmu3358_06815 PF01472 PUA domain Pmu3358_06815 PF00696 Amino acid kinase family Pmu3358_06820 PF06738 Putative threonine/serine exporter Pmu3358_06825 PF12821 Threonine/Serine exporter, ThrE Pmu3358_06825 PF06738 Putative threonine/serine exporter Pmu3358_06830 PF00186 Dihydrofolate reductase Pmu3358_06835 PF00403 Heavy-metal-associated domain Pmu3358_06840 PF00403 Heavy-metal-associated domain Pmu3358_06850 PF02592 Putative vitamin uptake transporter Pmu3358_06855 PF00512 His Kinase A (phospho-acceptor) domain Pmu3358_06855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Pmu3358_06855 PF00672 HAMP domain Pmu3358_06855 PF16527 Two-component sensor protein CpxA, periplasmic domain Pmu3358_06865 PF04355 SmpA / OmlA family Pmu3358_06870 PF04245 37-kD nucleoid-associated bacterial protein Pmu3358_06875 PF07208 Protein of unknown function (DUF1414) Pmu3358_06880 PF00884 Sulfatase Pmu3358_06880 PF11893 Domain of unknown function (DUF3413) Pmu3358_06890 PF13419 Haloacid dehalogenase-like hydrolase Pmu3358_06895 PF01207 Dihydrouridine synthase (Dus) Pmu3358_06905 PF05099 Tellurite resistance protein TerB Pmu3358_06905 PF00226 DnaJ domain Pmu3358_06910 PF00156 Phosphoribosyl transferase domain Pmu3358_06915 PF03725 3' exoribonuclease family, domain 2 Pmu3358_06915 PF01138 3' exoribonuclease family, domain 1 Pmu3358_06920 PF08340 Domain of unknown function (DUF1732) Pmu3358_06920 PF03755 YicC-like family, N-terminal region Pmu3358_06925 PF01571 Aminomethyltransferase folate-binding domain Pmu3358_06930 PF05525 Branched-chain amino acid transport protein Pmu3358_06935 PF06418 CTP synthase N-terminus Pmu3358_06935 PF00117 Glutamine amidotransferase class-I Pmu3358_06940 PF03952 Enolase, N-terminal domain Pmu3358_06940 PF00113 Enolase, C-terminal TIM barrel domain Pmu3358_06945 PF03652 Holliday junction resolvase Pmu3358_06950 PF02622 Uncharacterized ACR, COG1678 Pmu3358_06955 PF04452 RNA methyltransferase Pmu3358_06960 PF02565 Recombination protein O C terminal Pmu3358_06960 PF11967 Recombination protein O N terminal Pmu3358_06965 PF05958 tRNA (Uracil-5-)-methyltransferase Pmu3358_06965 PF01938 TRAM domain Pmu3358_06970 PF13291 ACT domain Pmu3358_06970 PF02824 TGS domain Pmu3358_06970 PF04607 Region found in RelA / SpoT proteins Pmu3358_06975 PF01219 Prokaryotic diacylglycerol kinase Pmu3358_06980 PF04932 O-Antigen ligase Pmu3358_06985 PF01116 Fructose-bisphosphate aldolase class-II Pmu3358_06990 PF00162 Phosphoglycerate kinase Pmu3358_06995 PF00445 Ribonuclease T2 family Pmu3358_07000 PF00037 4Fe-4S binding domain Pmu3358_07005 PF00588 SpoU rRNA Methylase family Pmu3358_07005 PF08032 RNA 2'-O ribose methyltransferase substrate binding Pmu3358_07010 PF13091 PLD-like domain Pmu3358_07015 PF02589 LUD domain Pmu3358_07020 PF11870 Domain of unknown function (DUF3390) Pmu3358_07020 PF13183 4Fe-4S dicluster domain Pmu3358_07020 PF02589 LUD domain Pmu3358_07025 PF02754 Cysteine-rich domain Pmu3358_07030 PF02652 L-lactate permease Pmu3358_07035 PF08328 Adenylosuccinate lyase C-terminal Pmu3358_07035 PF00206 Lyase Pmu3358_07040 PF04356 Protein of unknown function (DUF489) Pmu3358_07045 PF00294 pfkB family carbohydrate kinase Pmu3358_07050 PF00251 Glycosyl hydrolases family 32 N-terminal domain Pmu3358_07050 PF08244 Glycosyl hydrolases family 32 C terminal Pmu3358_07055 PF00356 Bacterial regulatory proteins, lacI family Pmu3358_07055 PF13407 Periplasmic binding protein domain Pmu3358_07060 PF02378 Phosphotransferase system, EIIC Pmu3358_07060 PF00367 phosphotransferase system, EIIB Pmu3358_07070 PF01075 Glycosyltransferase family 9 (heptosyltransferase) Pmu3358_07075 PF01075 Glycosyltransferase family 9 (heptosyltransferase) Pmu3358_07080 PF00271 Helicase conserved C-terminal domain Pmu3358_07080 PF00270 DEAD/DEAH box helicase Pmu3358_07085 PF05175 Methyltransferase small domain Pmu3358_07090 PF04973 Nicotinamide mononucleotide transporter Pmu3358_07095 PF18337 RapA N-terminal Tudor like domain Pmu3358_07095 PF18339 RapA N-terminal Tudor like domain 1 Pmu3358_07095 PF00176 SNF2 family N-terminal domain Pmu3358_07095 PF12137 RNA polymerase recycling family C-terminal Pmu3358_07095 PF00271 Helicase conserved C-terminal domain Pmu3358_07100 PF00849 RNA pseudouridylate synthase Pmu3358_07105 PF04220 Der GTPase activator (YihI) Pmu3358_07110 PF10675 Protein of unknown function (DUF2489) Pmu3358_07115 PF04055 Radical SAM superfamily Pmu3358_07115 PF06969 HemN C-terminal domain Pmu3358_07120 PF00881 Nitroreductase family Pmu3358_07135 PF03702 Anhydro-N-acetylmuramic acid kinase Pmu3358_07140 PF05188 MutS domain II Pmu3358_07140 PF05192 MutS domain III Pmu3358_07140 PF01624 MutS domain I Pmu3358_07140 PF05190 MutS family domain IV Pmu3358_07140 PF00488 MutS domain V Pmu3358_07165 PF03781 Sulfatase-modifying factor enzyme 1 Pmu3358_07175 PF00005 ABC transporter Pmu3358_07175 PF12704 MacB-like periplasmic core domain Pmu3358_07205 PF00154 recA bacterial DNA recombination protein Pmu3358_07210 PF02631 RecX family Pmu3358_07215 PF07219 HemY protein N-terminus Pmu3358_07220 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase Pmu3358_07225 PF02602 Uroporphyrinogen-III synthase HemD Pmu3358_07230 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain Pmu3358_07230 PF03900 Porphobilinogen deaminase, C-terminal domain Pmu3358_07235 PF12633 Adenylate cyclase NT domain Pmu3358_07235 PF01295 Adenylate cyclase, class-I Pmu3358_07240 PF00072 Response regulator receiver domain Pmu3358_07240 PF00196 Bacterial regulatory proteins, luxR family Pmu3358_07245 PF17243 POTRA domain TamA domain 1 Pmu3358_07245 PF01103 Surface antigen Pmu3358_07250 PF04357 TamB, inner membrane protein subunit of TAM complex Pmu3358_07260 PF12804 MobA-like NTP transferase domain Pmu3358_07260 PF00132 Bacterial transferase hexapeptide (six repeats) Pmu3358_07270 PF04445 Putative SAM-dependent methyltransferase Pmu3358_07275 PF05958 tRNA (Uracil-5-)-methyltransferase Pmu3358_07280 PF04219 Protein of unknown function, DUF Pmu3358_07285 PF01323 DSBA-like thioredoxin domain Pmu3358_07290 PF06288 Protein of unknown function (DUF1040) Pmu3358_07295 PF12804 MobA-like NTP transferase domain Pmu3358_07305 PF00381 PTS HPr component phosphorylation site Pmu3358_07305 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 Pmu3358_07310 PF00294 pfkB family carbohydrate kinase Pmu3358_07315 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit Pmu3358_07320 PF02613 Nitrate reductase delta subunit Pmu3358_07325 PF00384 Molybdopterin oxidoreductase Pmu3358_07325 PF18364 Molybdopterin oxidoreductase N-terminal domain Pmu3358_07325 PF01568 Molydopterin dinucleotide binding domain Pmu3358_07330 PF03264 NapC/NirT cytochrome c family, N-terminal region Pmu3358_07340 PF02028 BCCT, betaine/carnitine/choline family transporter Pmu3358_07345 PF03937 Flavinator of succinate dehydrogenase Pmu3358_07350 PF08281 Sigma-70, region 4 Pmu3358_07350 PF04542 Sigma-70 region 2 Pmu3358_07355 PF03872 Anti sigma-E protein RseA, N-terminal domain Pmu3358_07355 PF03873 Anti sigma-E protein RseA, C-terminal domain Pmu3358_07360 PF03888 MucB/RseB N-terminal domain Pmu3358_07360 PF17188 MucB/RseB C-terminal domain Pmu3358_07370 PF03205 Molybdopterin guanine dinucleotide synthesis protein B Pmu3358_07375 PF07690 Major Facilitator Superfamily Pmu3358_07445 PF12728 Helix-turn-helix domain Pmu3358_07455 PF13356 Arm DNA-binding domain Pmu3358_07455 PF00589 Phage integrase family Pmu3358_07460 PF03841 L-seryl-tRNA selenium transferase Pmu3358_07460 PF12390 Selenocysteine synthase N terminal Pmu3358_07465 PF01156 Inosine-uridine preferring nucleoside hydrolase Pmu3358_07470 PF03144 Elongation factor Tu domain 2 Pmu3358_07470 PF09106 Elongation factor SelB, winged helix Pmu3358_07470 PF09107 Elongation factor SelB, winged helix Pmu3358_07470 PF00009 Elongation factor Tu GTP binding domain Pmu3358_07475 PF12838 4Fe-4S dicluster domain Pmu3358_07475 PF00037 4Fe-4S binding domain Pmu3358_07480 PF02613 Nitrate reductase delta subunit Pmu3358_07485 PF04976 DMSO reductase anchor subunit (DmsC) Pmu3358_07490 PF13247 4Fe-4S dicluster domain Pmu3358_07490 PF12800 4Fe-4S binding domain Pmu3358_07495 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Pmu3358_07495 PF00384 Molybdopterin oxidoreductase Pmu3358_07495 PF01568 Molydopterin dinucleotide binding domain Pmu3358_07500 PF02308 MgtC family Pmu3358_07505 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 Pmu3358_07505 PF02378 Phosphotransferase system, EIIC Pmu3358_07505 PF00367 phosphotransferase system, EIIB Pmu3358_07510 PF01040 UbiA prenyltransferase family Pmu3358_07515 PF00227 Proteasome subunit Pmu3358_07520 PF00004 ATPase family associated with various cellular activities (AAA) Pmu3358_07520 PF07724 AAA domain (Cdc48 subfamily) Pmu3358_07520 PF10431 C-terminal, D2-small domain, of ClpB protein Pmu3358_07525 PF00485 Phosphoribulokinase / Uridine kinase family Pmu3358_07555 PF02447 GntP family permease Pmu3358_07560 PF01370 NAD dependent epimerase/dehydratase family Pmu3358_07575 PF01261 Xylose isomerase-like TIM barrel Pmu3358_07580 PF00596 Class II Aldolase and Adducin N-terminal domain Pmu3358_07585 PF07005 Sugar-binding N-terminal domain Pmu3358_07585 PF17042 Nucleotide-binding C-terminal domain Pmu3358_07590 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase Pmu3358_07590 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase Pmu3358_07595 PF08220 DeoR-like helix-turn-helix domain Pmu3358_07595 PF00455 DeoR C terminal sensor domain Pmu3358_07600 PF07687 Peptidase dimerisation domain Pmu3358_07600 PF01546 Peptidase family M20/M25/M40 Pmu3358_07605 PF00156 Phosphoribosyl transferase domain Pmu3358_07610 PF03786 D-mannonate dehydratase (UxuA) Pmu3358_07615 PF07729 FCD domain Pmu3358_07615 PF00392 Bacterial regulatory proteins, gntR family Pmu3358_07620 PF03480 Bacterial extracellular solute-binding protein, family 7 Pmu3358_07625 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component Pmu3358_07630 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component Pmu3358_07635 PF00106 short chain dehydrogenase Pmu3358_07640 PF02614 Glucuronate isomerase Pmu3358_07645 PF00294 pfkB family carbohydrate kinase Pmu3358_07650 PF01081 KDPG and KHG aldolase Pmu3358_07655 PF04073 Aminoacyl-tRNA editing domain Pmu3358_07655 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Pmu3358_07655 PF03129 Anticodon binding domain Pmu3358_07660 PF02782 FGGY family of carbohydrate kinases, C-terminal domain Pmu3358_07660 PF00370 FGGY family of carbohydrate kinases, N-terminal domain Pmu3358_07670 PF00155 Aminotransferase class I and II Pmu3358_07675 PF03553 Na+/H+ antiporter family Pmu3358_07680 PF13407 Periplasmic binding protein domain Pmu3358_07690 PF02653 Branched-chain amino acid transport system / permease component Pmu3358_07695 PF12833 Helix-turn-helix domain Pmu3358_07705 PF01116 Fructose-bisphosphate aldolase class-II Pmu3358_07715 PF00480 ROK family Pmu3358_07720 PF00072 Response regulator receiver domain Pmu3358_07720 PF00486 Transcriptional regulatory protein, C terminal Pmu3358_07725 PF13407 Periplasmic binding protein domain Pmu3358_07730 PF02653 Branched-chain amino acid transport system / permease component Pmu3358_07735 PF00005 ABC transporter Pmu3358_07740 PF02678 Pirin Pmu3358_07740 PF17954 Quercetinase C-terminal cupin domain Pmu3358_07745 PF00970 Oxidoreductase FAD-binding domain Pmu3358_07745 PF00042 Globin Pmu3358_07745 PF00175 Oxidoreductase NAD-binding domain Pmu3358_07750 PF00072 Response regulator receiver domain Pmu3358_07750 PF13426 PAS domain Pmu3358_07750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Pmu3358_07760 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain Pmu3358_07760 PF17810 Arginine decarboxylase helical bundle domain Pmu3358_07760 PF17944 Arginine decarboxylase C-terminal helical extension Pmu3358_07765 PF01266 FAD dependent oxidoreductase Pmu3358_07770 PF13416 Bacterial extracellular solute-binding protein Pmu3358_07775 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase Pmu3358_07780 PF04380 Membrane fusogenic activity Pmu3358_07785 PF01467 Cytidylyltransferase-like Pmu3358_07785 PF13521 AAA domain Pmu3358_07790 PF00149 Calcineurin-like phosphoesterase Pmu3358_07795 PF01196 Ribosomal protein L17 Pmu3358_07800 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain Pmu3358_07800 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain Pmu3358_07800 PF01000 RNA polymerase Rpb3/RpoA insert domain Pmu3358_07805 PF00163 Ribosomal protein S4/S9 N-terminal domain Pmu3358_07805 PF01479 S4 domain Pmu3358_07810 PF00411 Ribosomal protein S11 Pmu3358_07815 PF00416 Ribosomal protein S13/S18 Pmu3358_07820 PF00444 Ribosomal protein L36 Pmu3358_07825 PF00344 SecY translocase Pmu3358_07830 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A Pmu3358_07835 PF00327 Ribosomal protein L30p/L7e Pmu3358_07840 PF00333 Ribosomal protein S5, N-terminal domain Pmu3358_07840 PF03719 Ribosomal protein S5, C-terminal domain Pmu3358_07845 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast Pmu3358_07850 PF00347 Ribosomal protein L6 Pmu3358_07855 PF00410 Ribosomal protein S8 Pmu3358_07860 PF00253 Ribosomal protein S14p/S29e Pmu3358_07865 PF00281 Ribosomal protein L5 Pmu3358_07865 PF00673 ribosomal L5P family C-terminus Pmu3358_07870 PF00467 KOW motif Pmu3358_07870 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 Pmu3358_07875 PF00238 Ribosomal protein L14p/L23e Pmu3358_07880 PF00366 Ribosomal protein S17 Pmu3358_07885 PF00831 Ribosomal L29 protein Pmu3358_07890 PF00252 Ribosomal protein L16p/L10e Pmu3358_07895 PF00189 Ribosomal protein S3, C-terminal domain Pmu3358_07895 PF07650 KH domain Pmu3358_07900 PF00237 Ribosomal protein L22p/L17e Pmu3358_07905 PF00203 Ribosomal protein S19 Pmu3358_07910 PF03947 Ribosomal Proteins L2, C-terminal domain Pmu3358_07910 PF00181 Ribosomal Proteins L2, RNA binding domain Pmu3358_07915 PF00276 Ribosomal protein L23 Pmu3358_07920 PF00573 Ribosomal protein L4/L1 family Pmu3358_07925 PF00297 Ribosomal protein L3 Pmu3358_07930 PF00338 Ribosomal protein S10p/S20e Pmu3358_07935 PF00654 Voltage gated chloride channel Pmu3358_07940 PF01207 Dihydrouridine synthase (Dus) Pmu3358_07945 PF03222 Tryptophan/tyrosine permease family Pmu3358_07950 PF01212 Beta-eliminating lyase Pmu3358_07960 PF04277 Oxaloacetate decarboxylase, gamma chain Pmu3358_07965 PF00682 HMGL-like Pmu3358_07965 PF00364 Biotin-requiring enzyme Pmu3358_07965 PF02436 Conserved carboxylase domain Pmu3358_07970 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit Pmu3358_07975 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain Pmu3358_07975 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain Pmu3358_07985 PF01491 Frataxin-like domain Pmu3358_07990 PF02253 Phospholipase A1 Pmu3358_07995 PF00271 Helicase conserved C-terminal domain Pmu3358_07995 PF00570 HRDC domain Pmu3358_07995 PF09382 RQC domain Pmu3358_07995 PF16124 RecQ zinc-binding Pmu3358_07995 PF00270 DEAD/DEAH box helicase Pmu3358_08000 PF07715 TonB-dependent Receptor Plug Domain Pmu3358_08000 PF00593 TonB dependent receptor Pmu3358_08005 PF08501 Shikimate dehydrogenase substrate binding domain Pmu3358_08010 PF00132 Bacterial transferase hexapeptide (six repeats) Pmu3358_08010 PF06426 Serine acetyltransferase, N-terminal Pmu3358_08015 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus Pmu3358_08015 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus Pmu3358_08020 PF02556 Preprotein translocase subunit SecB Pmu3358_08025 PF00581 Rhodanese-like domain Pmu3358_08030 PF03605 Anaerobic c4-dicarboxylate membrane transporter Pmu3358_08035 PF05872 Bacterial protein of unknown function (DUF853) Pmu3358_08040 PF00581 Rhodanese-like domain Pmu3358_08045 PF17364 Family of unknown function (DUF5389) Pmu3358_08050 PF01694 Rhomboid family Pmu3358_08055 PF08220 DeoR-like helix-turn-helix domain Pmu3358_08055 PF00455 DeoR C terminal sensor domain Pmu3358_08060 PF13183 4Fe-4S dicluster domain Pmu3358_08060 PF02754 Cysteine-rich domain Pmu3358_08065 PF00890 FAD binding domain Pmu3358_08070 PF01266 FAD dependent oxidoreductase Pmu3358_08070 PF04324 BFD-like [2Fe-2S] binding domain Pmu3358_08075 PF07690 Major Facilitator Superfamily Pmu3358_08080 PF03009 Glycerophosphoryl diester phosphodiesterase family Pmu3358_08085 PF00230 Major intrinsic protein Pmu3358_08090 PF00370 FGGY family of carbohydrate kinases, N-terminal domain Pmu3358_08090 PF02782 FGGY family of carbohydrate kinases, C-terminal domain Pmu3358_08100 PF09371 Tex-like protein N-terminal domain Pmu3358_08100 PF00575 S1 RNA binding domain Pmu3358_08100 PF17674 HHH domain Pmu3358_08100 PF16921 Tex protein YqgF-like domain Pmu3358_08110 PF01272 Transcription elongation factor, GreA/GreB, C-term Pmu3358_08110 PF03449 Transcription elongation factor, N-terminal Pmu3358_08120 PF01184 GPR1/FUN34/yaaH family Pmu3358_08125 PF00171 Aldehyde dehydrogenase family Pmu3358_08125 PF00465 Iron-containing alcohol dehydrogenase Pmu3358_08130 PF08402 TOBE domain Pmu3358_08130 PF00005 ABC transporter Pmu3358_08135 PF00528 Binding-protein-dependent transport system inner membrane component Pmu3358_08140 PF00005 ABC transporter Pmu3358_08140 PF08402 TOBE domain Pmu3358_08155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Pmu3358_08155 PF00512 His Kinase A (phospho-acceptor) domain Pmu3358_08155 PF00672 HAMP domain Pmu3358_08160 PF14532 Sigma-54 interaction domain Pmu3358_08160 PF00072 Response regulator receiver domain Pmu3358_08160 PF02954 Bacterial regulatory protein, Fis family Pmu3358_08165 PF03601 Conserved hypothetical protein 698 Pmu3358_08170 PF00117 Glutamine amidotransferase class-I Pmu3358_08175 PF00425 chorismate binding enzyme Pmu3358_08180 PF01063 Amino-transferase class IV Pmu3358_08185 PF01042 Endoribonuclease L-PSP Pmu3358_08200 PF13687 Domain of unknown function (DUF4153) Pmu3358_08205 PF01161 Phosphatidylethanolamine-binding protein Pmu3358_08210 PF01638 HxlR-like helix-turn-helix Pmu3358_08220 PF00005 ABC transporter Pmu3358_08220 PF00664 ABC transporter transmembrane region Pmu3358_08225 PF00005 ABC transporter Pmu3358_08225 PF00664 ABC transporter transmembrane region Pmu3358_08230 PF00892 EamA-like transporter family Pmu3358_08235 PF18053 DNA gyrase B subunit insert domain Pmu3358_08235 PF01751 Toprim domain Pmu3358_08235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Pmu3358_08235 PF00986 DNA gyrase B subunit, carboxyl terminus Pmu3358_08235 PF00204 DNA gyrase B Pmu3358_08245 PF17336 Family of unknown function (DUF5368) Pmu3358_08250 PF00753 Metallo-beta-lactamase superfamily Pmu3358_08255 PF00581 Rhodanese-like domain Pmu3358_08255 PF11127 Protein of unknown function (DUF2892) Pmu3358_08260 PF01022 Bacterial regulatory protein, arsR family Pmu3358_08265 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded Pmu3358_08270 PF06005 Cell division protein ZapB Pmu3358_08275 PF00258 Flavodoxin Pmu3358_08280 PF01134 Glucose inhibited division protein A Pmu3358_08280 PF13932 GidA associated domain Pmu3358_08285 PF02527 rRNA small subunit methyltransferase G Pmu3358_08295 PF00119 ATP synthase A chain Pmu3358_08300 PF00137 ATP synthase subunit C Pmu3358_08305 PF00430 ATP synthase B/B' CF(0) Pmu3358_08310 PF00213 ATP synthase delta (OSCP) subunit Pmu3358_08315 PF00306 ATP synthase alpha/beta chain, C terminal domain Pmu3358_08315 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Pmu3358_08315 PF02874 ATP synthase alpha/beta family, beta-barrel domain Pmu3358_08320 PF00231 ATP synthase Pmu3358_08325 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Pmu3358_08325 PF02874 ATP synthase alpha/beta family, beta-barrel domain Pmu3358_08330 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain Pmu3358_08335 PF01206 Sulfurtransferase TusA Pmu3358_08340 PF01205 Uncharacterized protein family UPF0029 Pmu3358_08340 PF09186 Domain of unknown function (DUF1949) Pmu3358_08345 PF02386 Cation transport protein Pmu3358_08350 PF12724 Flavodoxin domain Pmu3358_08360 PF03887 YfbU domain Pmu3358_08365 PF04333 MlaA lipoprotein Pmu3358_08370 PF00117 Glutamine amidotransferase class-I Pmu3358_08370 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain Pmu3358_08375 PF02567 Phenazine biosynthesis-like protein Pmu3358_08385 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain Pmu3358_08385 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Pmu3358_08385 PF02142 MGS-like domain Pmu3358_08390 PF00300 Histidine phosphatase superfamily (branch 1) Pmu3358_08395 PF01551 Peptidase family M23 Pmu3358_08400 PF04748 Divergent polysaccharide deacetylase Pmu3358_08415 PF01078 Magnesium chelatase, subunit ChlI Pmu3358_08415 PF13335 Magnesium chelatase, subunit ChlI C-terminal Pmu3358_08420 PF01926 50S ribosome-binding GTPase Pmu3358_08425 PF04393 Protein of unknown function (DUF535) Pmu3358_08430 PF00588 SpoU rRNA Methylase family Pmu3358_08465 PF02881 SRP54-type protein, helical bundle domain Pmu3358_08465 PF00448 SRP54-type protein, GTPase domain Pmu3358_08470 PF00005 ABC transporter Pmu3358_08475 PF18075 FtsX extracellular domain Pmu3358_08480 PF01613 Flavin reductase like domain Pmu3358_08485 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal Pmu3358_08485 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal Pmu3358_08495 PF03480 Bacterial extracellular solute-binding protein, family 7 Pmu3358_08505 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component Pmu3358_08515 PF01557 Fumarylacetoacetate (FAA) hydrolase family Pmu3358_08520 PF00171 Aldehyde dehydrogenase family Pmu3358_08525 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase Pmu3358_08530 PF02962 5-carboxymethyl-2-hydroxymuconate isomerase Pmu3358_08535 PF07690 Major Facilitator Superfamily Pmu3358_08540 PF01557 Fumarylacetoacetate (FAA) hydrolase family Pmu3358_08545 PF03328 HpcH/HpaI aldolase/citrate lyase family Pmu3358_08550 PF00171 Aldehyde dehydrogenase family Pmu3358_08555 PF01293 Phosphoenolpyruvate carboxykinase Pmu3358_08560 PF13505 Outer membrane protein beta-barrel domain Pmu3358_08565 PF00293 NUDIX domain Pmu3358_08570 PF13419 Haloacid dehalogenase-like hydrolase Pmu3358_08575 PF01479 S4 domain Pmu3358_08580 PF01430 Hsp33 protein Pmu3358_08585 PF00459 Inositol monophosphatase family Pmu3358_08590 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain Pmu3358_08590 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain Pmu3358_08595 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase Pmu3358_08600 PF02798 Glutathione S-transferase, N-terminal domain Pmu3358_08600 PF14497 Glutathione S-transferase, C-terminal domain Pmu3358_08615 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain Pmu3358_08615 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase Pmu3358_08620 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD Pmu3358_08625 PF00156 Phosphoribosyl transferase domain Pmu3358_08630 PF01521 Iron-sulphur cluster biosynthesis Pmu3358_08630 PF01106 NifU-like domain Pmu3358_08635 PF04994 TfoX C-terminal domain Pmu3358_08635 PF04993 TfoX N-terminal domain Pmu3358_08640 PF01327 Polypeptide deformylase Pmu3358_08645 PF02911 Formyl transferase, C-terminal domain Pmu3358_08645 PF00551 Formyl transferase Pmu3358_08650 PF01029 NusB family Pmu3358_08650 PF01189 16S rRNA methyltransferase RsmB/F Pmu3358_08655 PF00535 Glycosyl transferase family 2 Pmu3358_08660 PF02254 TrkA-N domain Pmu3358_08660 PF02080 TrkA-C domain Pmu3358_08665 PF01741 Large-conductance mechanosensitive channel, MscL Pmu3358_08670 PF06877 Regulator of ribonuclease activity B Pmu3358_08680 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase Pmu3358_08685 PF04325 Protein of unknown function (DUF465) Pmu3358_08690 PF01451 Low molecular weight phosphotyrosine protein phosphatase Pmu3358_08695 PF05662 Coiled stalk of trimeric autotransporter adhesin Pmu3358_08695 PF13018 Extended Signal Peptide of Type V secretion system Pmu3358_08695 PF03895 YadA-like membrane anchor domain Pmu3358_08695 PF15401 Tryptophan-ring motif of head of Trimeric autotransporter adhesin Pmu3358_08700 PF00919 Uncharacterized protein family UPF0004 Pmu3358_08700 PF18693 TRAM domain Pmu3358_08700 PF04055 Radical SAM superfamily Pmu3358_08705 PF01048 Phosphorylase superfamily Pmu3358_08710 PF13404 AsnC-type helix-turn-helix domain Pmu3358_08710 PF01037 Lrp/AsnC ligand binding domain Pmu3358_08715 PF03590 Aspartate-ammonia ligase Pmu3358_08720 PF02378 Phosphotransferase system, EIIC Pmu3358_08720 PF00367 phosphotransferase system, EIIB Pmu3358_08725 PF13580 SIS domain Pmu3358_08730 PF01418 Helix-turn-helix domain, rpiR family Pmu3358_08730 PF01380 SIS domain Pmu3358_08735 PF16868 NMT1-like family Pmu3358_08750 PF01914 MarC family integral membrane protein Pmu3358_08765 PF00140 Sigma-70 factor, region 1.2 Pmu3358_08765 PF04542 Sigma-70 region 2 Pmu3358_08765 PF04545 Sigma-70, region 4 Pmu3358_08770 PF00939 Sodium:sulfate symporter transmembrane region Pmu3358_08775 PF13091 PLD-like domain Pmu3358_08780 PF03595 Voltage-dependent anion channel Pmu3358_08790 PF01565 FAD binding domain Pmu3358_08790 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain Pmu3358_08795 PF03575 Peptidase family S51 Pmu3358_08800 PF00672 HAMP domain Pmu3358_08800 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term Pmu3358_08800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Pmu3358_08800 PF07730 Histidine kinase Pmu3358_08805 PF12838 4Fe-4S dicluster domain Pmu3358_08805 PF13187 4Fe-4S dicluster domain Pmu3358_08810 PF03927 NapD protein Pmu3358_08815 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Pmu3358_08815 PF10518 TAT (twin-arginine translocation) pathway signal sequence Pmu3358_08815 PF01568 Molydopterin dinucleotide binding domain Pmu3358_08815 PF00384 Molybdopterin oxidoreductase Pmu3358_08820 PF12838 4Fe-4S dicluster domain Pmu3358_08820 PF12800 4Fe-4S binding domain Pmu3358_08825 PF12801 4Fe-4S binding domain Pmu3358_08825 PF12837 4Fe-4S binding domain Pmu3358_08830 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) Pmu3358_08835 PF03264 NapC/NirT cytochrome c family, N-terminal region Pmu3358_08840 PF17782 DprA winged helix domain Pmu3358_08840 PF02481 DNA recombination-mediator protein A Pmu3358_08845 PF04453 LPS transport system D Pmu3358_08845 PF03968 OstA-like protein Pmu3358_08850 PF03352 Methyladenine glycosylase Pmu3358_08855 PF00923 Transaldolase/Fructose-6-phosphate aldolase Pmu3358_08865 PF00293 NUDIX domain Pmu3358_08870 PF00849 RNA pseudouridylate synthase Pmu3358_08875 PF00180 Isocitrate/isopropylmalate dehydrogenase Pmu3358_08880 PF04977 Septum formation initiator Pmu3358_08885 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Pmu3358_08890 PF02542 YgbB family Pmu3358_08895 PF01142 tRNA pseudouridine synthase D (TruD) Pmu3358_08905 PF01975 Survival protein SurE Pmu3358_08910 PF09335 SNARE associated Golgi protein Pmu3358_08915 PF01476 LysM domain Pmu3358_08915 PF01551 Peptidase family M23 Pmu3358_08920 PF02580 D-Tyr-tRNA(Tyr) deacylase Pmu3358_08925 PF03631 Virulence factor BrkB Pmu3358_08930 PF02810 SEC-C motif Pmu3358_08940 PF00834 Ribulose-phosphate 3 epimerase family Pmu3358_08945 PF13419 Haloacid dehalogenase-like hydrolase Pmu3358_08950 PF00579 tRNA synthetases class I (W and Y) Pmu3358_08965 PF00291 Pyridoxal-phosphate dependent enzyme Pmu3358_08965 PF00585 C-terminal regulatory domain of Threonine dehydratase Pmu3358_08970 PF00920 Dehydratase family Pmu3358_08975 PF01177 Asp/Glu/Hydantoin racemase Pmu3358_08985 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Pmu3358_08985 PF00205 Thiamine pyrophosphate enzyme, central domain Pmu3358_08985 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Pmu3358_08995 PF02537 CrcB-like protein, Camphor Resistance (CrcB) Pmu3358_09000 PF12146 Serine aminopeptidase, S33 Pmu3358_09005 PF01118 Semialdehyde dehydrogenase, NAD binding domain Pmu3358_09005 PF02774 Semialdehyde dehydrogenase, dimerisation domain Pmu3358_09015 PF00596 Class II Aldolase and Adducin N-terminal domain Pmu3358_09020 PF01261 Xylose isomerase-like TIM barrel Pmu3358_09025 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family Pmu3358_09030 PF00370 FGGY family of carbohydrate kinases, N-terminal domain Pmu3358_09030 PF02782 FGGY family of carbohydrate kinases, C-terminal domain Pmu3358_09050 PF00005 ABC transporter Pmu3358_09055 PF03480 Bacterial extracellular solute-binding protein, family 7 Pmu3358_09060 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component Pmu3358_09065 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component Pmu3358_09070 PF04074 YhcH/YjgK/YiaL Pmu3358_09075 PF02615 Malate/L-lactate dehydrogenase Pmu3358_09080 PF09339 IclR helix-turn-helix domain Pmu3358_09080 PF01614 Bacterial transcriptional regulator Pmu3358_09090 PF07690 Major Facilitator Superfamily Pmu3358_09095 PF02581 Thiamine monophosphate synthase Pmu3358_09100 PF08543 Phosphomethylpyrimidine kinase Pmu3358_09105 PF02110 Hydroxyethylthiazole kinase family Pmu3358_09110 PF09084 NMT1/THI5 like Pmu3358_09115 PF03070 TENA/THI-4/PQQC family Pmu3358_09120 PF00528 Binding-protein-dependent transport system inner membrane component Pmu3358_09125 PF00005 ABC transporter Pmu3358_09130 PF02646 RmuC family Pmu3358_09135 PF02545 Maf-like protein Pmu3358_09140 PF01396 Topoisomerase DNA binding C4 zinc finger Pmu3358_09145 PF01300 Telomere recombination Pmu3358_09150 PF18317 Shikimate 5'-dehydrogenase C-terminal domain Pmu3358_09150 PF08501 Shikimate dehydrogenase substrate binding domain Pmu3358_09150 PF01488 Shikimate / quinate 5-dehydrogenase Pmu3358_09155 PF02782 FGGY family of carbohydrate kinases, C-terminal domain Pmu3358_09155 PF00370 FGGY family of carbohydrate kinases, N-terminal domain Pmu3358_09160 PF00325 Bacterial regulatory proteins, crp family Pmu3358_09160 PF04198 Putative sugar-binding domain Pmu3358_09165 PF00005 ABC transporter Pmu3358_09170 PF02653 Branched-chain amino acid transport system / permease component Pmu3358_09175 PF02653 Branched-chain amino acid transport system / permease component Pmu3358_09180 PF13407 Periplasmic binding protein domain Pmu3358_09185 PF01791 DeoC/LacD family aldolase Pmu3358_09190 PF03992 Antibiotic biosynthesis monooxygenase Pmu3358_09195 PF00834 Ribulose-phosphate 3 epimerase family Pmu3358_09200 PF00892 EamA-like transporter family Pmu3358_09210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Pmu3358_09210 PF03466 LysR substrate binding domain Pmu3358_09215 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain Pmu3358_09215 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain Pmu3358_09220 PF03819 MazG nucleotide pyrophosphohydrolase domain Pmu3358_09225 PF00582 Universal stress protein family Pmu3358_09230 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain Pmu3358_09230 PF01411 tRNA synthetases class II (A) Pmu3358_09230 PF02272 DHHA1 domain Pmu3358_09235 PF02599 Global regulator protein family Pmu3358_09240 PF00483 Nucleotidyl transferase Pmu3358_09245 PF01340 Met Apo-repressor, MetJ Pmu3358_09250 PF01048 Phosphorylase superfamily Pmu3358_09255 PF07670 Nucleoside recognition Pmu3358_09255 PF07662 Na+ dependent nucleoside transporter C-terminus Pmu3358_09255 PF01773 Na+ dependent nucleoside transporter N-terminus Pmu3358_09265 PF01075 Glycosyltransferase family 9 (heptosyltransferase) Pmu3358_09270 PF00886 Ribosomal protein S16 Pmu3358_09275 PF01782 RimM N-terminal domain Pmu3358_09275 PF05239 PRC-barrel domain Pmu3358_09280 PF01746 tRNA (Guanine-1)-methyltransferase Pmu3358_09285 PF01245 Ribosomal protein L19 Pmu3358_09290 PF03606 C4-dicarboxylate anaerobic carrier Pmu3358_09295 PF07687 Peptidase dimerisation domain Pmu3358_09295 PF01546 Peptidase family M20/M25/M40 Pmu3358_09305 PF00593 TonB dependent receptor Pmu3358_09305 PF07660 Secretin and TonB N terminus short domain Pmu3358_09305 PF07715 TonB-dependent Receptor Plug Domain Pmu3358_09315 PF00664 ABC transporter transmembrane region Pmu3358_09315 PF00005 ABC transporter Pmu3358_09320 PF01075 Glycosyltransferase family 9 (heptosyltransferase) Pmu3358_09330 PF01467 Cytidylyltransferase-like Pmu3358_09335 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) Pmu3358_09335 PF00534 Glycosyl transferases group 1 Pmu3358_09340 PF00535 Glycosyl transferase family 2 Pmu3358_09355 PF00005 ABC transporter Pmu3358_09360 PF13649 Methyltransferase domain Pmu3358_09365 PF00121 Triosephosphate isomerase Pmu3358_09375 PF02594 Uncharacterised ACR, YggU family COG1872 Pmu3358_09380 PF02325 YGGT family Pmu3358_09385 PF01544 CorA-like Mg2+ transporter protein Pmu3358_09390 PF04320 Protein with unknown function (DUF469) Pmu3358_09395 PF02390 Putative methyltransferase Pmu3358_09400 PF01292 Prokaryotic cytochrome b561 Pmu3358_09405 PF00730 HhH-GPD superfamily base excision DNA repair protein Pmu3358_09405 PF14815 NUDIX domain Pmu3358_09410 PF04362 Bacterial Fe(2+) trafficking Pmu3358_09415 PF01464 Transglycosylase SLT domain Pmu3358_09415 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain Pmu3358_09430 PF04072 Leucine carboxyl methyltransferase Pmu3358_09435 PF03923 Uncharacterized lipoprotein Pmu3358_09440 PF01722 BolA-like protein Pmu3358_09445 PF13407 Periplasmic binding protein domain Pmu3358_09450 PF00005 ABC transporter Pmu3358_09455 PF02653 Branched-chain amino acid transport system / permease component Pmu3358_09460 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) Pmu3358_09460 PF11973 NQRA C-terminal domain Pmu3358_09465 PF03116 NQR2, RnfD, RnfE family Pmu3358_09470 PF04205 FMN-binding domain Pmu3358_09475 PF02508 Rnf-Nqr subunit, membrane protein Pmu3358_09480 PF02508 Rnf-Nqr subunit, membrane protein Pmu3358_09485 PF00175 Oxidoreductase NAD-binding domain Pmu3358_09485 PF00111 2Fe-2S iron-sulfur cluster binding domain Pmu3358_09485 PF00970 Oxidoreductase FAD-binding domain Pmu3358_09490 PF02424 ApbE family Pmu3358_09505 PF16916 Dimerisation domain of Zinc Transporter Pmu3358_09505 PF01545 Cation efflux family Pmu3358_09510 PF07690 Major Facilitator Superfamily Pmu3358_09515 PF05231 MASE1 Pmu3358_09515 PF07730 Histidine kinase Pmu3358_09515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Pmu3358_09520 PF00196 Bacterial regulatory proteins, luxR family Pmu3358_09520 PF00072 Response regulator receiver domain Pmu3358_09525 PF07690 Major Facilitator Superfamily Pmu3358_09530 PF01370 NAD dependent epimerase/dehydratase family Pmu3358_09535 PF01791 DeoC/LacD family aldolase Pmu3358_09545 PF00440 Bacterial regulatory proteins, tetR family Pmu3358_09550 PF03466 LysR substrate binding domain Pmu3358_09550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Pmu3358_09555 PF08534 Redoxin Pmu3358_09555 PF00462 Glutaredoxin Pmu3358_09560 PF04102 SlyX Pmu3358_09565 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase Pmu3358_09565 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase Pmu3358_09570 PF08348 YheO-like PAS domain Pmu3358_09570 PF13309 HTH domain Pmu3358_09575 PF02635 DsrE/DsrF-like family Pmu3358_09580 PF02635 DsrE/DsrF-like family Pmu3358_09585 PF04077 DsrH like protein Pmu3358_09590 PF00164 Ribosomal protein S12/S23 Pmu3358_09595 PF00177 Ribosomal protein S7p/S5e Pmu3358_09600 PF00679 Elongation factor G C-terminus Pmu3358_09600 PF14492 Elongation Factor G, domain II Pmu3358_09600 PF03144 Elongation factor Tu domain 2 Pmu3358_09600 PF00009 Elongation factor Tu GTP binding domain Pmu3358_09600 PF03764 Elongation factor G, domain IV Pmu3358_09605 PF00584 SecE/Sec61-gamma subunits of protein translocation complex Pmu3358_09610 PF00467 KOW motif Pmu3358_09610 PF02357 Transcription termination factor nusG Pmu3358_09615 PF03946 Ribosomal protein L11, N-terminal domain Pmu3358_09615 PF00298 Ribosomal protein L11, RNA binding domain Pmu3358_09620 PF00687 Ribosomal protein L1p/L10e family Pmu3358_09625 PF02595 Glycerate kinase family Pmu3358_09630 PF02447 GntP family permease Pmu3358_09635 PF00466 Ribosomal protein L10 Pmu3358_09640 PF16320 Ribosomal protein L7/L12 dimerisation domain Pmu3358_09640 PF00542 Ribosomal protein L7/L12 C-terminal domain Pmu3358_09645 PF04560 RNA polymerase Rpb2, domain 7 Pmu3358_09645 PF00562 RNA polymerase Rpb2, domain 6 Pmu3358_09645 PF10385 RNA polymerase beta subunit external 1 domain Pmu3358_09645 PF04565 RNA polymerase Rpb2, domain 3 Pmu3358_09645 PF04561 RNA polymerase Rpb2, domain 2 Pmu3358_09645 PF04563 RNA polymerase beta subunit Pmu3358_09650 PF04998 RNA polymerase Rpb1, domain 5 Pmu3358_09650 PF05000 RNA polymerase Rpb1, domain 4 Pmu3358_09650 PF04983 RNA polymerase Rpb1, domain 3 Pmu3358_09650 PF00623 RNA polymerase Rpb1, domain 2 Pmu3358_09650 PF04997 RNA polymerase Rpb1, domain 1 Pmu3358_09655 PF00293 NUDIX domain Pmu3358_09655 PF09297 NADH pyrophosphatase zinc ribbon domain Pmu3358_09660 PF01208 Uroporphyrinogen decarboxylase (URO-D) Pmu3358_09665 PF04222 Protein of unknown function (DUF416) Pmu3358_09670 PF00216 Bacterial DNA-binding protein Pmu3358_09675 PF01380 SIS domain Pmu3358_09690 PF03180 NLPA lipoprotein Pmu3358_09695 PF00528 Binding-protein-dependent transport system inner membrane component Pmu3358_09700 PF09383 NIL domain Pmu3358_09700 PF00005 ABC transporter Pmu3358_09725 PF01494 FAD binding domain Pmu3358_09730 PF01494 FAD binding domain Pmu3358_09735 PF00557 Metallopeptidase family M24 Pmu3358_09735 PF05195 Aminopeptidase P, N-terminal domain Pmu3358_09740 PF03695 Uncharacterised protein family (UPF0149) Pmu3358_09745 PF05164 Cell division protein ZapA Pmu3358_09755 PF01812 5-formyltetrahydrofolate cyclo-ligase family Pmu3358_09760 PF13525 Outer membrane lipoprotein Pmu3358_09765 PF00849 RNA pseudouridylate synthase Pmu3358_09765 PF01479 S4 domain Pmu3358_09775 PF03797 Autotransporter beta-domain Pmu3358_09780 PF03120 NAD-dependent DNA ligase OB-fold domain Pmu3358_09780 PF01653 NAD-dependent DNA ligase adenylation domain Pmu3358_09780 PF00533 BRCA1 C Terminus (BRCT) domain Pmu3358_09780 PF03119 NAD-dependent DNA ligase C4 zinc finger domain Pmu3358_09780 PF12826 Helix-hairpin-helix motif Pmu3358_09785 PF00701 Dihydrodipicolinate synthetase family Pmu3358_09790 PF01380 SIS domain Pmu3358_09790 PF01418 Helix-turn-helix domain, rpiR family Pmu3358_09795 PF04074 YhcH/YjgK/YiaL Pmu3358_09800 PF00480 ROK family Pmu3358_09805 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase Pmu3358_09815 PF03480 Bacterial extracellular solute-binding protein, family 7 Pmu3358_09820 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component Pmu3358_09820 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component Pmu3358_09825 PF01344 Kelch motif Pmu3358_09830 PF11412 Disulphide bond corrector protein DsbC Pmu3358_09830 PF02683 Cytochrome C biogenesis protein transmembrane region Pmu3358_09835 PF00085 Thioredoxin Pmu3358_09840 PF02861 Clp amino terminal domain, pathogenicity island component Pmu3358_09840 PF00004 ATPase family associated with various cellular activities (AAA) Pmu3358_09840 PF10431 C-terminal, D2-small domain, of ClpB protein Pmu3358_09840 PF07724 AAA domain (Cdc48 subfamily) Pmu3358_09840 PF17871 AAA lid domain Pmu3358_09845 PF01678 Diaminopimelate epimerase Pmu3358_09855 PF02899 Phage integrase, N-terminal SAM-like domain Pmu3358_09855 PF00589 Phage integrase family Pmu3358_09860 PF13419 Haloacid dehalogenase-like hydrolase Pmu3358_09870 PF00892 EamA-like transporter family Pmu3358_09875 PF02152 Dihydroneopterin aldolase Pmu3358_09880 PF02660 Glycerol-3-phosphate acyltransferase Pmu3358_09885 PF04354 ZipA, C-terminal FtsZ-binding domain Pmu3358_09895 PF00291 Pyridoxal-phosphate dependent enzyme Pmu3358_09900 PF00490 Delta-aminolevulinic acid dehydratase Pmu3358_09905 PF00902 Sec-independent protein translocase protein (TatC) Pmu3358_09915 PF02416 mttA/Hcf106 family Pmu3358_09920 PF03109 ABC1 family Pmu3358_09925 PF02036 SCP-2 sterol transfer family Pmu3358_09930 PF01209 ubiE/COQ5 methyltransferase family Pmu3358_09935 PF17954 Quercetinase C-terminal cupin domain Pmu3358_09935 PF02678 Pirin Pmu3358_09940 PF06965 Na+/H+ antiporter 1 Pmu3358_09945 PF00884 Sulfatase Pmu3358_09950 PF00884 Sulfatase Pmu3358_09950 PF16347 Domain of unknown function (DUF4976) Pmu3358_09955 PF01970 Tripartite tricarboxylate transporter TctA family Pmu3358_09970 PF13186 Iron-sulfur cluster-binding domain Pmu3358_09970 PF04055 Radical SAM superfamily Pmu3358_09975 PF01595 Cyclin M transmembrane N-terminal domain Pmu3358_09975 PF00571 CBS domain Pmu3358_09975 PF03471 Transporter associated domain Pmu3358_09980 PF07509 Protein of unknown function (DUF1523) Pmu3358_09985 PF01026 TatD related DNase Pmu3358_09990 PF09115 DNA polymerase III, delta subunit, C terminal Pmu3358_09995 PF02223 Thymidylate kinase Pmu3358_10000 PF02618 YceG-like family Pmu3358_10005 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Pmu3358_10005 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Pmu3358_10010 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) Pmu3358_10015 PF04055 Radical SAM superfamily Pmu3358_10015 PF06969 HemN C-terminal domain Pmu3358_10020 PF01906 Putative heavy-metal-binding Pmu3358_10030 PF01725 Ham1 family Pmu3358_10040 PF02401 LytB protein Pmu3358_10045 PF01252 Signal peptidase (SPase) II Pmu3358_10050 PF08264 Anticodon-binding domain of tRNA Pmu3358_10050 PF00133 tRNA synthetases class I (I, L, M and V) Pmu3358_10055 PF06574 FAD synthetase Pmu3358_10055 PF01687 Riboflavin kinase Pmu3358_10060 PF03023 Lipid II flippase MurJ Pmu3358_10070 PF01649 Ribosomal protein S20 Pmu3358_10075 PF10144 Bacterial virulence factor haemolysin Pmu3358_10080 PF18429 Domain of unknown function (DUF5609) Pmu3358_10085 PF04461 Protein of unknown function (DUF520) Pmu3358_10100 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component Pmu3358_10100 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component Pmu3358_10110 PF03480 Bacterial extracellular solute-binding protein, family 7 Pmu3358_10115 PF04166 Pyridoxal phosphate biosynthetic protein PdxA Pmu3358_10120 PF02733 Dak1 domain Pmu3358_10125 PF02734 DAK2 domain Pmu3358_10135 PF00325 Bacterial regulatory proteins, crp family Pmu3358_10135 PF04198 Putative sugar-binding domain Pmu3358_10140 PF02502 Ribose/Galactose Isomerase Pmu3358_10145 PF03480 Bacterial extracellular solute-binding protein, family 7 Pmu3358_10155 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component Pmu3358_10165 PF00121 Triosephosphate isomerase Pmu3358_10170 PF00923 Transaldolase/Fructose-6-phosphate aldolase Pmu3358_10175 PF03979 Sigma-70 factor, region 1.1 Pmu3358_10175 PF00140 Sigma-70 factor, region 1.2 Pmu3358_10175 PF04542 Sigma-70 region 2 Pmu3358_10175 PF04545 Sigma-70, region 4 Pmu3358_10175 PF04539 Sigma-70 region 3 Pmu3358_10175 PF04546 Sigma-70, non-essential region Pmu3358_10180 PF08278 DNA primase DnaG DnaB-binding Pmu3358_10180 PF01807 CHC2 zinc finger Pmu3358_10180 PF10410 DnaB-helicase binding domain of primase Pmu3358_10180 PF08275 DNA primase catalytic core, N-terminal domain Pmu3358_10185 PF01165 Ribosomal protein S21 Pmu3358_10190 PF00814 Glycoprotease family Pmu3358_10200 PF00265 Thymidine kinase Pmu3358_10205 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Pmu3358_10205 PF07992 Pyridine nucleotide-disulphide oxidoreductase Pmu3358_10210 PF01174 SNO glutamine amidotransferase family Pmu3358_10215 PF01680 SOR/SNZ family Pmu3358_10220 PF00392 Bacterial regulatory proteins, gntR family Pmu3358_10220 PF00155 Aminotransferase class I and II Pmu3358_10230 PF11104 Type IV pilus assembly protein PilM; Pmu3358_10250 PF00263 Bacterial type II and III secretion system protein Pmu3358_10250 PF03958 Bacterial type II/III secretion system short domain Pmu3358_10255 PF01202 Shikimate kinase Pmu3358_10260 PF01761 3-dehydroquinate synthase Pmu3358_10265 PF02086 D12 class N6 adenine-specific DNA methyltransferase Pmu3358_10270 PF05258 Dna[CI] antecedent, DciA Pmu3358_10275 PF10818 Protein of unknown function (DUF2547) Pmu3358_10280 PF07517 SecA DEAD-like domain Pmu3358_10280 PF01043 SecA preprotein cross-linking domain Pmu3358_10280 PF07516 SecA Wing and Scaffold domain Pmu3358_10280 PF02810 SEC-C motif Pmu3358_10285 PF00293 NUDIX domain Pmu3358_10295 PF14840 Processivity clamp loader gamma complex DNA pol III C-term Pmu3358_10295 PF06144 DNA polymerase III, delta subunit Pmu3358_10300 PF04390 Lipopolysaccharide-assembly Pmu3358_10305 PF08264 Anticodon-binding domain of tRNA Pmu3358_10305 PF13603 Leucyl-tRNA synthetase, Domain 2 Pmu3358_10305 PF00133 tRNA synthetases class I (I, L, M and V) Pmu3358_10310 PF04886 PT repeat Pmu3358_10310 PF07715 TonB-dependent Receptor Plug Domain Pmu3358_10310 PF00593 TonB dependent receptor Pmu3358_10320 PF00589 Phage integrase family Pmu3358_10325 PF00403 Heavy-metal-associated domain Pmu3358_10335 PF01841 Transglutaminase-like superfamily Pmu3358_10340 PF00149 Calcineurin-like phosphoesterase Pmu3358_10345 PF00398 Ribosomal RNA adenine dimethylase Pmu3358_10350 PF00639 PPIC-type PPIASE domain Pmu3358_10350 PF09312 SurA N-terminal domain Pmu3358_10355 PF00156 Phosphoribosyl transferase domain Pmu3358_10360 PF01502 Phosphoribosyl-AMP cyclohydrolase Pmu3358_10360 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase Pmu3358_10370 PF00977 Histidine biosynthesis protein Pmu3358_10375 PF00977 Histidine biosynthesis protein Pmu3358_10380 PF00117 Glutamine amidotransferase class-I Pmu3358_10390 PF00475 Imidazoleglycerol-phosphate dehydratase Pmu3358_10395 PF00155 Aminotransferase class I and II Pmu3358_10405 PF00815 Histidinol dehydrogenase Pmu3358_10410 PF00132 Bacterial transferase hexapeptide (six repeats) Pmu3358_10420 PF01634 ATP phosphoribosyltransferase Pmu3358_10420 PF08029 HisG, C-terminal domain Pmu3358_10425 PF08241 Methyltransferase domain Pmu3358_10435 PF03222 Tryptophan/tyrosine permease family Pmu3358_10440 PF00719 Inorganic pyrophosphatase Pmu3358_10445 PF01435 Peptidase family M48 Pmu3358_10455 PF03544 Gram-negative bacterial TonB protein C-terminal Pmu3358_10460 PF02472 Biopolymer transport protein ExbD/TolR Pmu3358_10465 PF01618 MotA/TolQ/ExbB proton channel family Pmu3358_10470 PF01595 Cyclin M transmembrane N-terminal domain Pmu3358_10470 PF03471 Transporter associated domain Pmu3358_10470 PF00571 CBS domain Pmu3358_10475 PF01578 Cytochrome C assembly protein Pmu3358_10480 PF02881 SRP54-type protein, helical bundle domain Pmu3358_10480 PF00448 SRP54-type protein, GTPase domain Pmu3358_10480 PF02978 Signal peptide binding domain Pmu3358_10485 PF01553 Acyltransferase Pmu3358_10490 PF00717 Peptidase S24-like Pmu3358_10490 PF01726 LexA DNA binding domain Pmu3358_10495 PF01250 Ribosomal protein S6 Pmu3358_10500 PF00436 Single-strand binding protein family Pmu3358_10505 PF01084 Ribosomal protein S18 Pmu3358_10510 PF01281 Ribosomal protein L9, N-terminal domain Pmu3358_10510 PF03948 Ribosomal protein L9, C-terminal domain Pmu3358_10515 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme Pmu3358_10520 PF00120 Glutamine synthetase, catalytic domain Pmu3358_10520 PF03951 Glutamine synthetase, beta-Grasp domain Pmu3358_10525 PF06002 Alpha-2,3-sialyltransferase (CST-I) Pmu3358_10535 PF05675 Protein of unknown function (DUF817) Pmu3358_10545 PF01980 tRNA-methyltransferase O Pmu3358_10545 PF18389 TrmO C-terminal domain Pmu3358_10550 PF01040 UbiA prenyltransferase family Pmu3358_10555 PF03737 Aldolase/RraA Pmu3358_10560 PF00939 Sodium:sulfate symporter transmembrane region Pmu3358_10565 PF10396 GTP-binding protein TrmE N-terminus Pmu3358_10565 PF12631 MnmE helical domain Pmu3358_10565 PF01926 50S ribosome-binding GTPase Pmu3358_10570 PF14849 YidC periplasmic domain Pmu3358_10570 PF02096 60Kd inner membrane protein Pmu3358_10575 PF01809 Putative membrane protein insertion efficiency factor Pmu3358_10580 PF00825 Ribonuclease P Pmu3358_10585 PF00468 Ribosomal protein L34 Pmu3358_10590 PF08299 Bacterial dnaA protein helix-turn-helix Pmu3358_10590 PF00308 Bacterial dnaA protein Pmu3358_10590 PF11638 DnaA N-terminal domain Pmu3358_10595 PF00712 DNA polymerase III beta subunit, N-terminal domain Pmu3358_10595 PF02768 DNA polymerase III beta subunit, C-terminal domain Pmu3358_10595 PF02767 DNA polymerase III beta subunit, central domain Pmu3358_10600 PF02463 RecF/RecN/SMC N terminal domain Pmu3358_10605 PF13649 Methyltransferase domain Pmu3358_10610 PF13545 Crp-like helix-turn-helix domain Pmu3358_10610 PF00027 Cyclic nucleotide-binding domain Pmu3358_10615 PF06794 Uncharacterised protein family (UPF0270) Pmu3358_10620 PF00440 Bacterial regulatory proteins, tetR family Pmu3358_10625 PF00692 dUTPase Pmu3358_10630 PF04127 DNA / pantothenate metabolism flavoprotein Pmu3358_10630 PF02441 Flavoprotein Pmu3358_10635 PF04002 RadC-like JAB domain Pmu3358_10640 PF00830 Ribosomal L28 family Pmu3358_10645 PF00471 Ribosomal protein L33 Pmu3358_10650 PF06827 Zinc finger found in FPG and IleRS Pmu3358_10650 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain Pmu3358_10650 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain Pmu3358_10660 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) Pmu3358_10665 PF01197 Ribosomal protein L31 Pmu3358_10670 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) Pmu3358_10675 PF00535 Glycosyl transferase family 2 Pmu3358_10680 PF01501 Glycosyl transferase family 8 Pmu3358_10685 PF13439 Glycosyltransferase Family 4 Pmu3358_10685 PF00534 Glycosyl transferases group 1 Pmu3358_10690 PF00270 DEAD/DEAH box helicase Pmu3358_10690 PF00271 Helicase conserved C-terminal domain Pmu3358_10690 PF17764 3′ DNA-binding domain (3′BD) Pmu3358_10690 PF18074 Primosomal protein N C-terminal domain Pmu3358_10690 PF18319 PriA DNA helicase Cys-rich region (CRR) domain Pmu3358_10700 PF00440 Bacterial regulatory proteins, tetR family Pmu3358_10700 PF02909 Tetracyclin repressor-like, C-terminal domain Pmu3358_10825 PF01797 Transposase IS200 like