locus-tag	class	description
Pdw03_0003	COG3791	Glutathione-dependent formaldehyde-activating
Pdw03_0014	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
Pdw03_0017	COG0402	S-adenosylhomocysteine deaminase activity
Pdw03_0086	COG0714	Associated with various cellular activities
Pdw03_0168	COG2072	flavoprotein involved in K transport
Pdw03_0172	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
Pdw03_0220	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
Pdw03_0269	COG0842	Transport permease protein
Pdw03_0269	COG1716	ATPase activity
Pdw03_0269	COG1131	(ABC) transporter
Pdw03_0280	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
Pdw03_0301	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
Pdw03_0558	COG0328	RNA-DNA hybrid ribonuclease activity
Pdw03_0603	COG0366	Alpha amylase catalytic
Pdw03_0608	COG2814	Major facilitator Superfamily
Pdw03_0627	COG0784	Response regulator, receiver
Pdw03_0627	COG2205	protein histidine kinase activity
Pdw03_0627	COG5002	protein histidine kinase activity
Pdw03_0653	COG0227	Belongs to the bacterial ribosomal protein bL28 family
Pdw03_0672	COG1434	Gram-negative-bacterium-type cell wall biogenesis
Pdw03_0684	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
Pdw03_0689	COG3799	methylaspartate ammonia-lyase activity
Pdw03_0715	COG0288	reversible hydration of carbon dioxide
Pdw03_0756	COG0158	D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1
Pdw03_0808	COG0823	Involved in the tonB-independent uptake of proteins
Pdw03_0904	COG2217	Heavy metal translocating P-type atpase
Pdw03_0981	COG0163	prenyltransferase activity
Pdw03_1156	COG0076	glutamate decarboxylase activity
Pdw03_1160	COG0133	tryptophan synthase activity
Pdw03_1216	COG2814	Major facilitator Superfamily
Pdw03_1217	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
Pdw03_1263	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
Pdw03_1263	COG2124	cytochrome p450
Pdw03_1272	COG2272	Belongs to the type-B carboxylesterase lipase family
Pdw03_1410	COG2814	Major facilitator Superfamily
Pdw03_1464	COG1231	oxidoreductase activity
Pdw03_1491	COG2717	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain
Pdw03_1521	COG1012	belongs to the aldehyde dehydrogenase family
Pdw03_1540	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
Pdw03_1574	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
Pdw03_1659	COG0833	amino acid
Pdw03_1722	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
Pdw03_1726	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
Pdw03_1754	COG0542	response to heat
Pdw03_1780	COG4266	Belongs to the allantoicase family
Pdw03_1787	COG0017	Asparaginyl-tRNA synthetase
Pdw03_1793	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
Pdw03_1812	COG1793	dna ligase
Pdw03_1829	COG2351	hydroxyisourate hydrolase activity
Pdw03_1854	COG0484	heat shock protein binding
Pdw03_1887	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
Pdw03_1935	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
Pdw03_1935	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
Pdw03_1938	COG0156	8-amino-7-oxononanoate synthase activity
Pdw03_2064	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
Pdw03_2116	COG3961	Belongs to the TPP enzyme family
Pdw03_2148	COG0512	Glutamine amidotransferase of anthranilate synthase
Pdw03_2148	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
Pdw03_2192	COG1073	alpha beta
Pdw03_2218	COG2124	cytochrome p450
Pdw03_2233	COG0546	phosphoglycolate phosphatase activity
Pdw03_2297	COG0071	Belongs to the small heat shock protein (HSP20) family
Pdw03_2300	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
Pdw03_2384	COG3119	arylsulfatase activity
Pdw03_2386	COG2271	Major facilitator Superfamily
Pdw03_2391	COG0009	L-threonylcarbamoyladenylate synthase
Pdw03_2392	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
Pdw03_2403	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
Pdw03_2420	COG2814	Major facilitator Superfamily
Pdw03_2452	COG2814	Major facilitator Superfamily
Pdw03_2465	COG0656	L-ascorbic acid biosynthetic process
Pdw03_2475	COG4178	(ABC) transporter
Pdw03_2544	COG0037	tRNA processing
Pdw03_2568	COG0084	hydrolase, TatD family'
Pdw03_2630	COG0109	protoheme IX farnesyltransferase activity
Pdw03_2671	COG0523	cobalamin synthesis protein
Pdw03_2695	COG0318	PFAM AMP-dependent synthetase and ligase
Pdw03_2728	COG0153	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
Pdw03_2769	COG0123	including yeast histone deacetylase and acetoin utilization protein
Pdw03_2771	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
Pdw03_2783	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
Pdw03_2855	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
Pdw03_2855	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
Pdw03_2897	COG1643	Atp-dependent helicase
Pdw03_3005	COG0513	Belongs to the DEAD box helicase family
Pdw03_3119	COG1418	mRNA catabolic process
Pdw03_3172	COG3525	Glycosyl hydrolase, family 20, catalytic domain
Pdw03_3197	COG0563	adenylate kinase activity
Pdw03_3212	COG0183	Belongs to the thiolase family
Pdw03_3220	COG2271	Major facilitator Superfamily
Pdw03_3250	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
Pdw03_3303	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
Pdw03_3362	COG3321	synthase
Pdw03_3362	COG1028	Short-chain dehydrogenase reductase Sdr
Pdw03_3362	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
Pdw03_3362	COG0318	PFAM AMP-dependent synthetase and ligase
Pdw03_3362	COG0300	oxidoreductase activity
Pdw03_3387	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
Pdw03_3387	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
Pdw03_3417	COG0829	nickel cation binding
Pdw03_3482	COG1472	Belongs to the glycosyl hydrolase 3 family
Pdw03_3564	COG0515	serine threonine protein kinase
Pdw03_3564	COG2815	serine threonine protein kinase
Pdw03_3672	COG4225	unsaturated rhamnogalacturonyl hydrolase activity
Pdw03_3698	COG4581	dead DEAH box helicase
Pdw03_3723	COG2226	methyltransferase
Pdw03_3735	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
Pdw03_3735	COG1017	nitric oxide dioxygenase activity
Pdw03_3756	COG2814	Major facilitator Superfamily
Pdw03_3764	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
Pdw03_3878	COG5265	(ABC) transporter
Pdw03_3933	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
Pdw03_3951	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
Pdw03_3998	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
Pdw03_4022	COG0673	inositol 2-dehydrogenase activity
Pdw03_4023	COG2814	Major facilitator Superfamily
Pdw03_4029	COG3961	Belongs to the TPP enzyme family
Pdw03_4202	COG0431	NADPH-dependent FMN reductase
Pdw03_4310	COG0123	including yeast histone deacetylase and acetoin utilization protein
Pdw03_4342	COG1454	alcohol dehydrogenase
Pdw03_4347	COG2226	methyltransferase
Pdw03_4369	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
Pdw03_4399	COG1902	pentaerythritol trinitrate reductase activity
Pdw03_4458	COG0484	heat shock protein binding
Pdw03_4500	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
Pdw03_4542	COG0095	Lipoate-protein ligase
Pdw03_4602	COG0071	Belongs to the small heat shock protein (HSP20) family
Pdw03_4663	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
Pdw03_4663	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
Pdw03_4687	COG2814	Major facilitator Superfamily
Pdw03_4764	COG1716	ATPase activity
Pdw03_4764	COG0842	Transport permease protein
Pdw03_4764	COG1131	(ABC) transporter
Pdw03_4831	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
Pdw03_4836	COG0513	Belongs to the DEAD box helicase family
Pdw03_4846	COG3961	Belongs to the TPP enzyme family
Pdw03_4858	COG0277	FAD linked oxidase domain protein
Pdw03_4883	COG0688	phosphatidylethanolamine metabolic process
Pdw03_4895	COG0424	maF-like protein
Pdw03_4897	COG2130	NADP-dependent
Pdw03_4918	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
Pdw03_4960	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
Pdw03_5003	COG0443	Heat shock 70 kDa protein
Pdw03_5108	COG1501	Belongs to the glycosyl hydrolase 31 family
Pdw03_5111	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
Pdw03_5136	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
Pdw03_5205	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
Pdw03_5230	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
Pdw03_5295	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
Pdw03_5316	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
Pdw03_5316	COG2898	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
Pdw03_5338	COG3527	Alpha-acetolactate decarboxylase
Pdw03_5339	COG0028	Belongs to the TPP enzyme family
Pdw03_5344	COG0657	acetylesterase activity
Pdw03_5448	COG0724	RNA recognition motif
Pdw03_5502	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
Pdw03_5535	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
Pdw03_5574	COG0515	serine threonine protein kinase
Pdw03_5574	COG2815	serine threonine protein kinase
Pdw03_5596	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
Pdw03_5687	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
Pdw03_5811	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
Pdw03_5815	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
Pdw03_5829	COG0321	lipoyl(octanoyl) transferase activity
Pdw03_5901	COG3250	beta-galactosidase activity
Pdw03_5921	COG0724	RNA recognition motif
Pdw03_5981	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
Pdw03_6033	COG1028	Short-chain dehydrogenase reductase Sdr
Pdw03_6035	COG1234	tRNA 3'-trailer cleavage
Pdw03_6044	COG0513	Belongs to the DEAD box helicase family
Pdw03_6046	COG1063	alcohol dehydrogenase
Pdw03_6050	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
Pdw03_6061	COG0154	amidase activity
Pdw03_6072	COG1472	Belongs to the glycosyl hydrolase 3 family
Pdw03_6073	COG0513	Belongs to the DEAD box helicase family
Pdw03_6083	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
Pdw03_6085	COG2153	protein acetylation
Pdw03_6115	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
Pdw03_6173	COG0513	Belongs to the DEAD box helicase family
Pdw03_6202	COG0318	PFAM AMP-dependent synthetase and ligase
Pdw03_6234	COG0438	transferase activity, transferring glycosyl groups
Pdw03_6323	COG0515	serine threonine protein kinase
Pdw03_6380	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
Pdw03_6469	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
Pdw03_6474	COG2423	ornithine cyclodeaminase activity
Pdw03_6498	COG0293	Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit
Pdw03_6499	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
Pdw03_6503	COG1764	response to oxidative stress
Pdw03_6580	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
Pdw03_6638	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
Pdw03_6676	COG0443	Heat shock 70 kDa protein
Pdw03_6781	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
Pdw03_6855	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
Pdw03_6894	COG0625	glutathione transferase activity
Pdw03_6910	COG0488	(ABC) transporter
Pdw03_6930	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
Pdw03_6976	COG1362	aminopeptidase activity
Pdw03_6985	COG0211	Belongs to the bacterial ribosomal protein bL27 family
Pdw03_7022	COG2814	Major facilitator Superfamily
Pdw03_7065	COG0430	RNA-3'-phosphate cyclase activity
Pdw03_7176	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
Pdw03_7225	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
Pdw03_7225	COG0047	phosphoribosylformylglycinamidine synthase activity
Pdw03_7243	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
Pdw03_7262	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
Pdw03_7285	COG0505	Belongs to the CarA family
Pdw03_7310	COG2814	Major facilitator Superfamily
Pdw03_7317	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
Pdw03_7327	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
Pdw03_7327	COG2169	Transcriptional regulator
Pdw03_7342	COG2815	serine threonine protein kinase
Pdw03_7342	COG0515	serine threonine protein kinase
Pdw03_7346	COG1160	GTP binding
Pdw03_7445	COG2515	1-aminocyclopropane-1-carboxylate deaminase
Pdw03_7534	COG0237	dephospho-CoA kinase activity
Pdw03_7600	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
Pdw03_7643	COG2814	Major facilitator Superfamily
Pdw03_7686	COG1064	alcohol dehydrogenase
Pdw03_7725	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
Pdw03_7772	COG2814	Major facilitator Superfamily
Pdw03_7818	COG1643	Atp-dependent helicase
Pdw03_7834	COG0259	pyridoxamine-phosphate oxidase activity
Pdw03_7918	COG2130	NADP-dependent
Pdw03_7921	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
Pdw03_7942	COG3961	Belongs to the TPP enzyme family
Pdw03_7982	COG2132	Multicopper oxidase
Pdw03_7999	COG1028	Short-chain dehydrogenase reductase Sdr
Pdw03_8004	COG0354	folic acid binding
Pdw03_8119	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
Pdw03_8138	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
Pdw03_8187	COG0513	Belongs to the DEAD box helicase family
Pdw03_8291	COG0667	Aldo Keto reductase
Pdw03_8361	COG1131	(ABC) transporter
Pdw03_8361	COG1716	ATPase activity
Pdw03_8361	COG0842	Transport permease protein
Pdw03_8438	COG0017	Asparaginyl-tRNA synthetase
Pdw03_8450	COG0698	ribose 5-phosphate isomerase
Pdw03_8451	COG0149	triose-phosphate isomerase activity
Pdw03_8471	COG1111	helicase
Pdw03_8471	COG1205	dead DEAH box helicase
Pdw03_8656	COG0784	Response regulator, receiver
Pdw03_8656	COG2198	Histidine kinase
Pdw03_8656	COG5002	protein histidine kinase activity
Pdw03_8688	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
Pdw03_8750	COG0285	dihydrofolate synthase activity
Pdw03_8765	COG2814	Major facilitator Superfamily
Pdw03_8766	COG2226	methyltransferase
Pdw03_8767	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
Pdw03_8791	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
Pdw03_8801	COG1113	amino acid transport
Pdw03_8830	COG1113	amino acid transport
Pdw03_8849	COG3957	D-xylulose 5-phosphate D-fructose 6-phosphate phosphoketolase
Pdw03_9001	COG3791	Glutathione-dependent formaldehyde-activating