locus-tag class description PhaeoP54_00001 PF11638 DnaA N-terminal domain PhaeoP54_00001 PF00308 Bacterial dnaA protein PhaeoP54_00001 PF08299 Bacterial dnaA protein helix-turn-helix PhaeoP54_00002 PF00712 DNA polymerase III beta subunit, N-terminal domain PhaeoP54_00002 PF02767 DNA polymerase III beta subunit, central domain PhaeoP54_00002 PF02768 DNA polymerase III beta subunit, C-terminal domain PhaeoP54_00003 PF02463 RecF/RecN/SMC N terminal domain PhaeoP54_00006 PF03358 NADPH-dependent FMN reductase PhaeoP54_00007 PF01751 Toprim domain PhaeoP54_00007 PF00204 DNA gyrase B PhaeoP54_00007 PF00986 DNA gyrase B subunit, carboxyl terminus PhaeoP54_00007 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PhaeoP54_00011 PF01588 Putative tRNA binding domain PhaeoP54_00012 PF00180 Isocitrate/isopropylmalate dehydrogenase PhaeoP54_00013 PF00171 Aldehyde dehydrogenase family PhaeoP54_00014 PF01037 Lrp/AsnC ligand binding domain PhaeoP54_00016 PF00202 Aminotransferase class-III PhaeoP54_00018 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component PhaeoP54_00021 PF01321 Creatinase/Prolidase N-terminal domain PhaeoP54_00021 PF00557 Metallopeptidase family M24 PhaeoP54_00023 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component PhaeoP54_00027 PF01565 FAD binding domain PhaeoP54_00027 PF02913 FAD linked oxidases, C-terminal domain PhaeoP54_00038 PF00202 Aminotransferase class-III PhaeoP54_00040 PF03401 Tripartite tricarboxylate transporter family receptor PhaeoP54_00042 PF01970 Tripartite tricarboxylate transporter TctA family PhaeoP54_00043 PF00171 Aldehyde dehydrogenase family PhaeoP54_00046 PF00171 Aldehyde dehydrogenase family PhaeoP54_00047 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily PhaeoP54_00048 PF01557 Fumarylacetoacetate (FAA) hydrolase family PhaeoP54_00049 PF01557 Fumarylacetoacetate (FAA) hydrolase family PhaeoP54_00053 PF00857 Isochorismatase family PhaeoP54_00054 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PhaeoP54_00054 PF00512 His Kinase A (phospho-acceptor) domain PhaeoP54_00054 PF01627 Hpt domain PhaeoP54_00054 PF00072 Response regulator receiver domain PhaeoP54_00055 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain PhaeoP54_00055 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family PhaeoP54_00056 PF00171 Aldehyde dehydrogenase family PhaeoP54_00058 PF08352 Oligopeptide/dipeptide transporter, C-terminal region PhaeoP54_00058 PF00005 ABC transporter PhaeoP54_00060 PF00528 Binding-protein-dependent transport system inner membrane component PhaeoP54_00061 PF00850 Histone deacetylase domain PhaeoP54_00062 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle PhaeoP54_00063 PF02548 Ketopantoate hydroxymethyltransferase PhaeoP54_00064 PF02569 Pantoate-beta-alanine ligase PhaeoP54_00065 PF00370 FGGY family of carbohydrate kinases, N-terminal domain PhaeoP54_00065 PF02782 FGGY family of carbohydrate kinases, C-terminal domain PhaeoP54_00066 PF01494 FAD binding domain PhaeoP54_00067 PF00293 NUDIX domain PhaeoP54_00069 PF03576 Peptidase family S58 PhaeoP54_00071 PF00472 RF-1 domain PhaeoP54_00074 PF03411 Penicillin-insensitive murein endopeptidase PhaeoP54_00075 PF11700 Vacuole effluxer Atg22 like PhaeoP54_00077 PF02325 YGGT family PhaeoP54_00078 PF00270 DEAD/DEAH box helicase PhaeoP54_00078 PF00271 Helicase conserved C-terminal domain PhaeoP54_00078 PF00570 HRDC domain PhaeoP54_00078 PF16124 RecQ zinc-binding PhaeoP54_00078 PF09382 RQC domain PhaeoP54_00079 PF03883 Peroxide stress protein YaaA PhaeoP54_00080 PF00512 His Kinase A (phospho-acceptor) domain PhaeoP54_00080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PhaeoP54_00080 PF01627 Hpt domain PhaeoP54_00080 PF00072 Response regulator receiver domain PhaeoP54_00080 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) PhaeoP54_00080 PF00672 HAMP domain PhaeoP54_00081 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain PhaeoP54_00081 PF11974 Bacterial alpha-2-macroglobulin MG3 domain PhaeoP54_00081 PF07703 Alpha-2-macroglobulin bait region domain PhaeoP54_00081 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain PhaeoP54_00081 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain PhaeoP54_00081 PF01835 MG2 domain PhaeoP54_00081 PF07678 A-macroglobulin TED domain PhaeoP54_00081 PF00207 Alpha-2-macroglobulin family PhaeoP54_00081 PF17962 Bacterial macroglobulin domain 6 PhaeoP54_00082 PF06832 Penicillin-Binding Protein C-terminus Family PhaeoP54_00082 PF00912 Transglycosylase PhaeoP54_00082 PF00905 Penicillin binding protein transpeptidase domain PhaeoP54_00086 PF17863 AAA lid domain PhaeoP54_00086 PF07726 ATPase family associated with various cellular activities (AAA) PhaeoP54_00088 PF01261 Xylose isomerase-like TIM barrel PhaeoP54_00090 PF01367 5'-3' exonuclease, C-terminal SAM fold PhaeoP54_00090 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain PhaeoP54_00090 PF00476 DNA polymerase family A PhaeoP54_00090 PF01612 3'-5' exonuclease PhaeoP54_00091 PF00563 EAL domain PhaeoP54_00091 PF00990 Diguanylate cyclase, GGDEF domain PhaeoP54_00091 PF13188 PAS domain PhaeoP54_00091 PF03707 Bacterial signalling protein N terminal repeat PhaeoP54_00093 PF00005 ABC transporter PhaeoP54_00097 PF00664 ABC transporter transmembrane region PhaeoP54_00097 PF03412 Peptidase C39 family PhaeoP54_00097 PF00005 ABC transporter PhaeoP54_00099 PF01039 Carboxyl transferase domain PhaeoP54_00099 PF17848 Acetyl-coA carboxylase zinc finger domain PhaeoP54_00100 PF02875 Mur ligase family, glutamate ligase domain PhaeoP54_00100 PF08245 Mur ligase middle domain PhaeoP54_00101 PF03969 AFG1-like ATPase PhaeoP54_00102 PF07690 Major Facilitator Superfamily PhaeoP54_00103 PF02423 Ornithine cyclodeaminase/mu-crystallin family PhaeoP54_00106 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 PhaeoP54_00107 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain PhaeoP54_00107 PF07992 Pyridine nucleotide-disulphide oxidoreductase PhaeoP54_00108 PF00756 Putative esterase PhaeoP54_00110 PF16859 Tetracyclin repressor-like, C-terminal domain PhaeoP54_00110 PF00440 Bacterial regulatory proteins, tetR family PhaeoP54_00114 PF00877 NlpC/P60 family PhaeoP54_00115 PF02789 Cytosol aminopeptidase family, N-terminal domain PhaeoP54_00115 PF00883 Cytosol aminopeptidase family, catalytic domain PhaeoP54_00117 PF00484 Carbonic anhydrase PhaeoP54_00120 PF02774 Semialdehyde dehydrogenase, dimerisation domain PhaeoP54_00120 PF01118 Semialdehyde dehydrogenase, NAD binding domain PhaeoP54_00125 PF00005 ABC transporter PhaeoP54_00126 PF12399 Branched-chain amino acid ATP-binding cassette transporter PhaeoP54_00126 PF00005 ABC transporter PhaeoP54_00128 PF03328 HpcH/HpaI aldolase/citrate lyase family PhaeoP54_00130 PF01047 MarR family PhaeoP54_00131 PF05161 MOFRL family PhaeoP54_00131 PF13660 Domain of unknown function (DUF4147) PhaeoP54_00132 PF16347 Domain of unknown function (DUF4976) PhaeoP54_00132 PF00884 Sulfatase PhaeoP54_00133 PF08220 DeoR-like helix-turn-helix domain PhaeoP54_00133 PF00455 DeoR C terminal sensor domain PhaeoP54_00134 PF02690 Na+/Pi-cotransporter PhaeoP54_00137 PF00005 ABC transporter PhaeoP54_00137 PF08402 TOBE domain PhaeoP54_00138 PF00528 Binding-protein-dependent transport system inner membrane component PhaeoP54_00140 PF00535 Glycosyl transferase family 2 PhaeoP54_00146 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) PhaeoP54_00150 PF06793 Uncharacterised protein family (UPF0262) PhaeoP54_00154 PF00795 Carbon-nitrogen hydrolase PhaeoP54_00155 PF01176 Translation initiation factor 1A / IF-1 PhaeoP54_00156 PF02545 Maf-like protein PhaeoP54_00157 PF00575 S1 RNA binding domain PhaeoP54_00157 PF10150 Ribonuclease E/G family PhaeoP54_00158 PF03884 DNA gyrase inhibitor YacG PhaeoP54_00167 PF12833 Helix-turn-helix domain PhaeoP54_00170 PF00487 Fatty acid desaturase PhaeoP54_00172 PF13545 Crp-like helix-turn-helix domain PhaeoP54_00172 PF00027 Cyclic nucleotide-binding domain PhaeoP54_00178 PF01145 SPFH domain / Band 7 family PhaeoP54_00179 PF01145 SPFH domain / Band 7 family PhaeoP54_00185 PF00589 Phage integrase family PhaeoP54_00185 PF02899 Phage integrase, N-terminal SAM-like domain PhaeoP54_00186 PF07729 FCD domain PhaeoP54_00186 PF00392 Bacterial regulatory proteins, gntR family PhaeoP54_00187 PF03480 Bacterial extracellular solute-binding protein, family 7 PhaeoP54_00189 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component PhaeoP54_00190 PF17645 Arylmalonate decarboxylase PhaeoP54_00192 PF01161 Phosphatidylethanolamine-binding protein PhaeoP54_00193 PF01161 Phosphatidylethanolamine-binding protein PhaeoP54_00196 PF13333 Integrase core domain PhaeoP54_00196 PF00665 Integrase core domain PhaeoP54_00196 PF13276 HTH-like domain PhaeoP54_00200 PF00535 Glycosyl transferase family 2 PhaeoP54_00201 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family PhaeoP54_00202 PF16363 GDP-mannose 4,6 dehydratase PhaeoP54_00204 PF00924 Mechanosensitive ion channel PhaeoP54_00205 PF01226 Formate/nitrite transporter PhaeoP54_00207 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain PhaeoP54_00207 PF07992 Pyridine nucleotide-disulphide oxidoreductase PhaeoP54_00210 PF13411 MerR HTH family regulatory protein PhaeoP54_00211 PF07690 Major Facilitator Superfamily PhaeoP54_00212 PF00089 Trypsin PhaeoP54_00213 PF13533 Biotin-lipoyl like PhaeoP54_00214 PF00005 ABC transporter PhaeoP54_00214 PF00664 ABC transporter transmembrane region PhaeoP54_00217 PF08298 PrkA AAA domain PhaeoP54_00217 PF06798 PrkA serine protein kinase C-terminal domain PhaeoP54_00218 PF04285 Protein of unknown function (DUF444) PhaeoP54_00219 PF04293 SpoVR like protein PhaeoP54_00220 PF07729 FCD domain PhaeoP54_00220 PF00392 Bacterial regulatory proteins, gntR family PhaeoP54_00221 PF08240 Alcohol dehydrogenase GroES-like domain PhaeoP54_00221 PF00107 Zinc-binding dehydrogenase PhaeoP54_00222 PF00403 Heavy-metal-associated domain PhaeoP54_00223 PF00376 MerR family regulatory protein PhaeoP54_00223 PF09278 MerR, DNA binding PhaeoP54_00225 PF00775 Dioxygenase PhaeoP54_00226 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal PhaeoP54_00226 PF00775 Dioxygenase PhaeoP54_00227 PF02627 Carboxymuconolactone decarboxylase family PhaeoP54_00228 PF03466 LysR substrate binding domain PhaeoP54_00228 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PhaeoP54_00229 PF02653 Branched-chain amino acid transport system / permease component PhaeoP54_00230 PF02653 Branched-chain amino acid transport system / permease component PhaeoP54_00231 PF00005 ABC transporter PhaeoP54_00231 PF12399 Branched-chain amino acid ATP-binding cassette transporter PhaeoP54_00232 PF00005 ABC transporter PhaeoP54_00233 PF00501 AMP-binding enzyme PhaeoP54_00237 PF00107 Zinc-binding dehydrogenase PhaeoP54_00237 PF08240 Alcohol dehydrogenase GroES-like domain PhaeoP54_00241 PF00356 Bacterial regulatory proteins, lacI family PhaeoP54_00242 PF13416 Bacterial extracellular solute-binding protein PhaeoP54_00243 PF00528 Binding-protein-dependent transport system inner membrane component PhaeoP54_00244 PF00528 Binding-protein-dependent transport system inner membrane component PhaeoP54_00245 PF17912 MalK OB fold domain PhaeoP54_00245 PF00005 ABC transporter PhaeoP54_00247 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain PhaeoP54_00247 PF02805 Metal binding domain of Ada PhaeoP54_00247 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain PhaeoP54_00247 PF12833 Helix-turn-helix domain PhaeoP54_00248 PF06415 BPG-independent PGAM N-terminus (iPGM_N) PhaeoP54_00248 PF01676 Metalloenzyme superfamily PhaeoP54_00250 PF13180 PDZ domain PhaeoP54_00250 PF03572 Peptidase family S41 PhaeoP54_00251 PF14525 AraC-binding-like domain PhaeoP54_00251 PF12833 Helix-turn-helix domain PhaeoP54_00252 PF01494 FAD binding domain PhaeoP54_00254 PF00005 ABC transporter PhaeoP54_00255 PF01061 ABC-2 type transporter PhaeoP54_00256 PF06965 Na+/H+ antiporter 1 PhaeoP54_00256 PF01343 Peptidase family S49 PhaeoP54_00258 PF01699 Sodium/calcium exchanger protein PhaeoP54_00260 PF08459 UvrC Helix-hairpin-helix N-terminal PhaeoP54_00260 PF12826 Helix-hairpin-helix motif PhaeoP54_00260 PF02151 UvrB/uvrC motif PhaeoP54_00260 PF01541 GIY-YIG catalytic domain PhaeoP54_00261 PF01066 CDP-alcohol phosphatidyltransferase PhaeoP54_00263 PF02391 MoaE protein PhaeoP54_00265 PF00691 OmpA family PhaeoP54_00265 PF00223 Photosystem I psaA/psaB protein PhaeoP54_00266 PF01040 UbiA prenyltransferase family PhaeoP54_00267 PF04452 RNA methyltransferase PhaeoP54_00270 PF04107 Glutamate-cysteine ligase family 2(GCS2) PhaeoP54_00273 PF02660 Glycerol-3-phosphate acyltransferase PhaeoP54_00274 PF01979 Amidohydrolase family PhaeoP54_00277 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain PhaeoP54_00277 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain PhaeoP54_00278 PF03167 Uracil DNA glycosylase superfamily PhaeoP54_00279 PF00994 Probable molybdopterin binding domain PhaeoP54_00281 PF00873 AcrB/AcrD/AcrF family PhaeoP54_00282 PF00293 NUDIX domain PhaeoP54_00284 PF02622 Uncharacterized ACR, COG1678 PhaeoP54_00285 PF03481 Putative GTP-binding controlling metal-binding PhaeoP54_00285 PF01300 Telomere recombination PhaeoP54_00286 PF02770 Acyl-CoA dehydrogenase, middle domain PhaeoP54_00286 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PhaeoP54_00286 PF12806 Acetyl-CoA dehydrogenase C-terminal like PhaeoP54_00286 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PhaeoP54_00293 PF02634 FdhD/NarQ family PhaeoP54_00294 PF12804 MobA-like NTP transferase domain PhaeoP54_00295 PF03205 Molybdopterin guanine dinucleotide synthesis protein B PhaeoP54_00297 PF00994 Probable molybdopterin binding domain PhaeoP54_00297 PF03453 MoeA N-terminal region (domain I and II) PhaeoP54_00297 PF03454 MoeA C-terminal region (domain IV) PhaeoP54_00299 PF03449 Transcription elongation factor, N-terminal PhaeoP54_00299 PF01272 Transcription elongation factor, GreA/GreB, C-term PhaeoP54_00302 PF09278 MerR, DNA binding PhaeoP54_00302 PF00376 MerR family regulatory protein PhaeoP54_00304 PF13181 Tetratricopeptide repeat PhaeoP54_00304 PF07719 Tetratricopeptide repeat PhaeoP54_00305 PF08544 GHMP kinases C terminal PhaeoP54_00305 PF00288 GHMP kinases N terminal domain PhaeoP54_00306 PF00348 Polyprenyl synthetase PhaeoP54_00311 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PhaeoP54_00311 PF03466 LysR substrate binding domain PhaeoP54_00313 PF02803 Thiolase, C-terminal domain PhaeoP54_00313 PF00108 Thiolase, N-terminal domain PhaeoP54_00315 PF04116 Fatty acid hydroxylase superfamily PhaeoP54_00317 PF08534 Redoxin PhaeoP54_00318 PF00206 Lyase PhaeoP54_00318 PF14698 Argininosuccinate lyase C-terminal PhaeoP54_00320 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain PhaeoP54_00320 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain PhaeoP54_00323 PF00005 ABC transporter PhaeoP54_00328 PF07992 Pyridine nucleotide-disulphide oxidoreductase PhaeoP54_00328 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain PhaeoP54_00330 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) PhaeoP54_00330 PF00364 Biotin-requiring enzyme PhaeoP54_00330 PF02817 e3 binding domain PhaeoP54_00331 PF16870 2-oxoglutarate dehydrogenase C-terminal PhaeoP54_00331 PF00676 Dehydrogenase E1 component PhaeoP54_00331 PF16078 2-oxoglutarate dehydrogenase N-terminus PhaeoP54_00331 PF02779 Transketolase, pyrimidine binding domain PhaeoP54_00332 PF00549 CoA-ligase PhaeoP54_00332 PF02629 CoA binding domain PhaeoP54_00333 PF00549 CoA-ligase PhaeoP54_00333 PF08442 ATP-grasp domain PhaeoP54_00335 PF00056 lactate/malate dehydrogenase, NAD binding domain PhaeoP54_00335 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain PhaeoP54_00338 PF03328 HpcH/HpaI aldolase/citrate lyase family PhaeoP54_00341 PF01575 MaoC like domain PhaeoP54_00344 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit PhaeoP54_00346 PF00890 FAD binding domain PhaeoP54_00346 PF02910 Fumarate reductase flavoprotein C-term PhaeoP54_00349 PF13085 2Fe-2S iron-sulfur cluster binding domain PhaeoP54_00349 PF13237 4Fe-4S dicluster domain PhaeoP54_00351 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain PhaeoP54_00351 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain PhaeoP54_00353 PF01048 Phosphorylase superfamily PhaeoP54_00354 PF00816 H-NS histone family PhaeoP54_00356 PF01757 Acyltransferase family PhaeoP54_00357 PF01553 Acyltransferase PhaeoP54_00359 PF03472 Autoinducer binding domain PhaeoP54_00359 PF00196 Bacterial regulatory proteins, luxR family PhaeoP54_00360 PF00765 Autoinducer synthase PhaeoP54_00364 PF01925 Sulfite exporter TauE/SafE PhaeoP54_00370 PF00814 Glycoprotease family PhaeoP54_00371 PF01106 NifU-like domain PhaeoP54_00373 PF01063 Amino-transferase class IV PhaeoP54_00375 PF00175 Oxidoreductase NAD-binding domain PhaeoP54_00375 PF00970 Oxidoreductase FAD-binding domain PhaeoP54_00375 PF00111 2Fe-2S iron-sulfur cluster binding domain PhaeoP54_00376 PF01883 Iron-sulfur cluster assembly protein PhaeoP54_00377 PF05138 Phenylacetic acid catabolic protein PhaeoP54_00378 PF06243 Phenylacetic acid degradation B PhaeoP54_00379 PF05138 Phenylacetic acid catabolic protein PhaeoP54_00380 PF00108 Thiolase, N-terminal domain PhaeoP54_00380 PF02803 Thiolase, C-terminal domain PhaeoP54_00381 PF00884 Sulfatase PhaeoP54_00381 PF16347 Domain of unknown function (DUF4976) PhaeoP54_00382 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain PhaeoP54_00382 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain PhaeoP54_00382 PF00378 Enoyl-CoA hydratase/isomerase PhaeoP54_00383 PF02803 Thiolase, C-terminal domain PhaeoP54_00383 PF00108 Thiolase, N-terminal domain PhaeoP54_00384 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PhaeoP54_00384 PF02770 Acyl-CoA dehydrogenase, middle domain PhaeoP54_00384 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PhaeoP54_00385 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PhaeoP54_00385 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PhaeoP54_00387 PF13193 AMP-binding enzyme C-terminal domain PhaeoP54_00387 PF00501 AMP-binding enzyme PhaeoP54_00388 PF00834 Ribulose-phosphate 3 epimerase family PhaeoP54_00389 PF00005 ABC transporter PhaeoP54_00391 PF00528 Binding-protein-dependent transport system inner membrane component PhaeoP54_00392 PF00528 Binding-protein-dependent transport system inner membrane component PhaeoP54_00393 PF00132 Bacterial transferase hexapeptide (six repeats) PhaeoP54_00395 PF06754 Phosphonate metabolism protein PhnG PhaeoP54_00397 PF05861 Bacterial phosphonate metabolism protein (PhnI) PhaeoP54_00399 PF06007 Phosphonate metabolism protein PhnJ PhaeoP54_00400 PF00005 ABC transporter PhaeoP54_00401 PF00005 ABC transporter PhaeoP54_00404 PF07969 Amidohydrolase family PhaeoP54_00409 PF13439 Glycosyltransferase Family 4 PhaeoP54_00409 PF00534 Glycosyl transferases group 1 PhaeoP54_00410 PF00534 Glycosyl transferases group 1 PhaeoP54_00412 PF00924 Mechanosensitive ion channel PhaeoP54_00413 PF02515 CoA-transferase family III PhaeoP54_00414 PF12911 N-terminal TM domain of oligopeptide transport permease C PhaeoP54_00414 PF00528 Binding-protein-dependent transport system inner membrane component PhaeoP54_00415 PF00528 Binding-protein-dependent transport system inner membrane component PhaeoP54_00417 PF08352 Oligopeptide/dipeptide transporter, C-terminal region PhaeoP54_00417 PF00005 ABC transporter PhaeoP54_00422 PF01037 Lrp/AsnC ligand binding domain PhaeoP54_00424 PF00664 ABC transporter transmembrane region PhaeoP54_00424 PF00005 ABC transporter PhaeoP54_00425 PF01557 Fumarylacetoacetate (FAA) hydrolase family PhaeoP54_00426 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain PhaeoP54_00426 PF13378 Enolase C-terminal domain-like PhaeoP54_00427 PF00107 Zinc-binding dehydrogenase PhaeoP54_00427 PF08240 Alcohol dehydrogenase GroES-like domain PhaeoP54_00428 PF00206 Lyase PhaeoP54_00428 PF10397 Adenylosuccinate lyase C-terminus PhaeoP54_00429 PF12146 Serine aminopeptidase, S33 PhaeoP54_00431 PF00291 Pyridoxal-phosphate dependent enzyme PhaeoP54_00432 PF00561 alpha/beta hydrolase fold PhaeoP54_00434 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase PhaeoP54_00435 PF03060 Nitronate monooxygenase PhaeoP54_00437 PF02801 Beta-ketoacyl synthase, C-terminal domain PhaeoP54_00437 PF00109 Beta-ketoacyl synthase, N-terminal domain PhaeoP54_00438 PF07977 FabA-like domain PhaeoP54_00440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PhaeoP54_00440 PF03466 LysR substrate binding domain PhaeoP54_00443 PF00919 Uncharacterized protein family UPF0004 PhaeoP54_00443 PF04055 Radical SAM superfamily PhaeoP54_00443 PF01938 TRAM domain PhaeoP54_00444 PF00691 OmpA family PhaeoP54_00444 PF01389 OmpA-like transmembrane domain PhaeoP54_00446 PF02562 PhoH-like protein PhaeoP54_00447 PF02130 Uncharacterized protein family UPF0054 PhaeoP54_00448 PF03471 Transporter associated domain PhaeoP54_00448 PF00571 CBS domain PhaeoP54_00449 PF00795 Carbon-nitrogen hydrolase PhaeoP54_00451 PF00438 S-adenosylmethionine synthetase, N-terminal domain PhaeoP54_00451 PF02772 S-adenosylmethionine synthetase, central domain PhaeoP54_00451 PF02773 S-adenosylmethionine synthetase, C-terminal domain PhaeoP54_00453 PF02390 Putative methyltransferase PhaeoP54_00454 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) PhaeoP54_00455 PF02224 Cytidylate kinase PhaeoP54_00456 PF00575 S1 RNA binding domain PhaeoP54_00457 PF00216 Bacterial DNA-binding protein PhaeoP54_00459 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase PhaeoP54_00460 PF00291 Pyridoxal-phosphate dependent enzyme PhaeoP54_00463 PF01195 Peptidyl-tRNA hydrolase PhaeoP54_00464 PF01386 Ribosomal L25p family PhaeoP54_00464 PF14693 Ribosomal protein TL5, C-terminal domain PhaeoP54_00465 PF01070 FMN-dependent dehydrogenase PhaeoP54_00466 PF00290 Tryptophan synthase alpha chain PhaeoP54_00468 PF01926 50S ribosome-binding GTPase PhaeoP54_00468 PF06071 Protein of unknown function (DUF933) PhaeoP54_00469 PF01156 Inosine-uridine preferring nucleoside hydrolase PhaeoP54_00472 PF00355 Rieske [2Fe-2S] domain PhaeoP54_00472 PF00848 Ring hydroxylating alpha subunit (catalytic domain) PhaeoP54_00473 PF00175 Oxidoreductase NAD-binding domain PhaeoP54_00473 PF00970 Oxidoreductase FAD-binding domain PhaeoP54_00473 PF00111 2Fe-2S iron-sulfur cluster binding domain PhaeoP54_00474 PF13737 Transposase DDE domain PhaeoP54_00477 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family PhaeoP54_00479 PF00535 Glycosyl transferase family 2 PhaeoP54_00481 PF00701 Dihydrodipicolinate synthetase family PhaeoP54_00482 PF05544 Proline racemase PhaeoP54_00483 PF00171 Aldehyde dehydrogenase family PhaeoP54_00484 PF01266 FAD dependent oxidoreductase PhaeoP54_00485 PF00672 HAMP domain PhaeoP54_00485 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PhaeoP54_00489 PF00528 Binding-protein-dependent transport system inner membrane component PhaeoP54_00490 PF00528 Binding-protein-dependent transport system inner membrane component PhaeoP54_00491 PF00005 ABC transporter PhaeoP54_00494 PF02926 THUMP domain PhaeoP54_00494 PF01170 Putative RNA methylase family UPF0020 PhaeoP54_00494 PF10672 S-adenosylmethionine-dependent methyltransferase PhaeoP54_00496 PF02397 Bacterial sugar transferase PhaeoP54_00499 PF01943 Polysaccharide biosynthesis protein PhaeoP54_00500 PF00534 Glycosyl transferases group 1 PhaeoP54_00500 PF13439 Glycosyltransferase Family 4 PhaeoP54_00504 PF17837 4'-phosphopantetheinyl transferase N-terminal domain PhaeoP54_00504 PF01648 4'-phosphopantetheinyl transferase superfamily PhaeoP54_00505 PF00501 AMP-binding enzyme PhaeoP54_00505 PF00668 Condensation domain PhaeoP54_00505 PF13193 AMP-binding enzyme C-terminal domain PhaeoP54_00505 PF00550 Phosphopantetheine attachment site PhaeoP54_00505 PF07993 Male sterility protein PhaeoP54_00507 PF00109 Beta-ketoacyl synthase, N-terminal domain PhaeoP54_00507 PF16197 Ketoacyl-synthetase C-terminal extension PhaeoP54_00507 PF00698 Acyl transferase domain PhaeoP54_00507 PF02801 Beta-ketoacyl synthase, C-terminal domain PhaeoP54_00507 PF00550 Phosphopantetheine attachment site PhaeoP54_00507 PF00668 Condensation domain PhaeoP54_00509 PF03808 Glycosyl transferase WecB/TagA/CpsF family PhaeoP54_00512 PF02685 Glucokinase PhaeoP54_00516 PF03466 LysR substrate binding domain PhaeoP54_00516 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PhaeoP54_00517 PF00576 HIUase/Transthyretin family PhaeoP54_00519 PF04115 Ureidoglycolate lyase PhaeoP54_00520 PF00860 Permease family PhaeoP54_00521 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain PhaeoP54_00521 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain PhaeoP54_00523 PF07883 Cupin domain PhaeoP54_00523 PF05899 Protein of unknown function (DUF861) PhaeoP54_00526 PF00120 Glutamine synthetase, catalytic domain PhaeoP54_00528 PF01597 Glycine cleavage H-protein PhaeoP54_00529 PF02347 Glycine cleavage system P-protein PhaeoP54_00530 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PhaeoP54_00530 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PhaeoP54_00530 PF02770 Acyl-CoA dehydrogenase, middle domain PhaeoP54_00531 PF06508 Queuosine biosynthesis protein QueC PhaeoP54_00532 PF01242 6-pyruvoyl tetrahydropterin synthase PhaeoP54_00533 PF04055 Radical SAM superfamily PhaeoP54_00534 PF14489 QueF-like protein PhaeoP54_00536 PF01416 tRNA pseudouridine synthase PhaeoP54_00537 PF04317 YcjX-like family, DUF463 PhaeoP54_00539 PF05128 Domain of unknown function (DUF697) PhaeoP54_00542 PF08264 Anticodon-binding domain of tRNA PhaeoP54_00542 PF00133 tRNA synthetases class I (I, L, M and V) PhaeoP54_00544 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain PhaeoP54_00544 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain PhaeoP54_00545 PF01066 CDP-alcohol phosphatidyltransferase PhaeoP54_00547 PF02899 Phage integrase, N-terminal SAM-like domain PhaeoP54_00547 PF00589 Phage integrase family PhaeoP54_00549 PF00923 Transaldolase/Fructose-6-phosphate aldolase PhaeoP54_00550 PF18074 Primosomal protein N C-terminal domain PhaeoP54_00550 PF00270 DEAD/DEAH box helicase PhaeoP54_00550 PF17764 3′ DNA-binding domain (3′BD) PhaeoP54_00550 PF18319 PriA DNA helicase Cys-rich region (CRR) domain PhaeoP54_00551 PF04143 Sulphur transport PhaeoP54_00556 PF02075 Crossover junction endodeoxyribonuclease RuvC PhaeoP54_00557 PF07499 RuvA, C-terminal domain PhaeoP54_00557 PF01330 RuvA N terminal domain PhaeoP54_00558 PF17864 RuvB AAA lid domain PhaeoP54_00558 PF05491 RuvB C-terminal winged helix domain PhaeoP54_00558 PF05496 Holliday junction DNA helicase RuvB P-loop domain PhaeoP54_00560 PF03061 Thioesterase superfamily PhaeoP54_00561 PF01618 MotA/TolQ/ExbB proton channel family PhaeoP54_00562 PF02472 Biopolymer transport protein ExbD/TolR PhaeoP54_00564 PF04052 TolB amino-terminal domain PhaeoP54_00564 PF07676 WD40-like Beta Propeller Repeat PhaeoP54_00565 PF00691 OmpA family PhaeoP54_00567 PF01171 PP-loop family PhaeoP54_00568 PF01434 Peptidase family M41 PhaeoP54_00568 PF06480 FtsH Extracellular PhaeoP54_00568 PF17862 AAA+ lid domain PhaeoP54_00568 PF00004 ATPase family associated with various cellular activities (AAA) PhaeoP54_00570 PF01268 Formate--tetrahydrofolate ligase PhaeoP54_00571 PF02153 Prephenate dehydrogenase PhaeoP54_00571 PF01817 Chorismate mutase type II PhaeoP54_00572 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain PhaeoP54_00572 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain PhaeoP54_00575 PF00271 Helicase conserved C-terminal domain PhaeoP54_00575 PF00270 DEAD/DEAH box helicase PhaeoP54_00575 PF08494 DEAD/H associated PhaeoP54_00582 PF00437 Type II/IV secretion system protein PhaeoP54_00584 PF00691 OmpA family PhaeoP54_00585 PF00263 Bacterial type II and III secretion system protein PhaeoP54_00585 PF04972 BON domain PhaeoP54_00585 PF13629 Pilus formation protein N terminal region PhaeoP54_00589 PF01464 Transglycosylase SLT domain PhaeoP54_00591 PF01144 Coenzyme A transferase PhaeoP54_00592 PF01144 Coenzyme A transferase PhaeoP54_00593 PF01751 Toprim domain PhaeoP54_00593 PF01131 DNA topoisomerase PhaeoP54_00593 PF13368 Topoisomerase C-terminal repeat PhaeoP54_00593 PF01396 Topoisomerase DNA binding C4 zinc finger PhaeoP54_00594 PF02481 DNA recombination-mediator protein A PhaeoP54_00595 PF01523 Putative modulator of DNA gyrase PhaeoP54_00596 PF02790 Cytochrome C oxidase subunit II, transmembrane domain PhaeoP54_00596 PF00116 Cytochrome C oxidase subunit II, periplasmic domain PhaeoP54_00597 PF01040 UbiA prenyltransferase family PhaeoP54_00599 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 PhaeoP54_00600 PF00510 Cytochrome c oxidase subunit III PhaeoP54_00601 PF02104 SURF1 family PhaeoP54_00602 PF00291 Pyridoxal-phosphate dependent enzyme PhaeoP54_00602 PF14821 Threonine synthase N terminus PhaeoP54_00603 PF00675 Insulinase (Peptidase family M16) PhaeoP54_00603 PF05193 Peptidase M16 inactive domain PhaeoP54_00605 PF01565 FAD binding domain PhaeoP54_00605 PF02913 FAD linked oxidases, C-terminal domain PhaeoP54_00606 PF07690 Major Facilitator Superfamily PhaeoP54_00607 PF02469 Fasciclin domain PhaeoP54_00608 PF00156 Phosphoribosyl transferase domain PhaeoP54_00609 PF01048 Phosphorylase superfamily PhaeoP54_00610 PF00916 Sulfate permease family PhaeoP54_00610 PF01740 STAS domain PhaeoP54_00611 PF00132 Bacterial transferase hexapeptide (six repeats) PhaeoP54_00612 PF01613 Flavin reductase like domain PhaeoP54_00618 PF02091 Glycyl-tRNA synthetase alpha subunit PhaeoP54_00620 PF03616 Sodium/glutamate symporter PhaeoP54_00621 PF05746 DALR anticodon binding domain PhaeoP54_00621 PF02092 Glycyl-tRNA synthetase beta subunit PhaeoP54_00622 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain PhaeoP54_00622 PF00391 PEP-utilising enzyme, mobile domain PhaeoP54_00622 PF02896 PEP-utilising enzyme, TIM barrel domain PhaeoP54_00623 PF01471 Putative peptidoglycan binding domain PhaeoP54_00623 PF07486 Cell Wall Hydrolase PhaeoP54_00624 PF02152 Dihydroneopterin aldolase PhaeoP54_00625 PF00809 Pterin binding enzyme PhaeoP54_00626 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II PhaeoP54_00626 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III PhaeoP54_00626 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain PhaeoP54_00626 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I PhaeoP54_00629 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain PhaeoP54_00629 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain PhaeoP54_00631 PF01037 Lrp/AsnC ligand binding domain PhaeoP54_00631 PF13404 AsnC-type helix-turn-helix domain PhaeoP54_00633 PF01494 FAD binding domain PhaeoP54_00636 PF00392 Bacterial regulatory proteins, gntR family PhaeoP54_00636 PF07729 FCD domain PhaeoP54_00638 PF00117 Glutamine amidotransferase class-I PhaeoP54_00638 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain PhaeoP54_00642 PF00115 Cytochrome C and Quinol oxidase polypeptide I PhaeoP54_00643 PF01230 HIT domain PhaeoP54_00645 PF03099 Biotin/lipoate A/B protein ligase family PhaeoP54_00649 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle PhaeoP54_00651 PF12911 N-terminal TM domain of oligopeptide transport permease C PhaeoP54_00651 PF00528 Binding-protein-dependent transport system inner membrane component PhaeoP54_00652 PF08352 Oligopeptide/dipeptide transporter, C-terminal region PhaeoP54_00652 PF00005 ABC transporter PhaeoP54_00653 PF08352 Oligopeptide/dipeptide transporter, C-terminal region PhaeoP54_00653 PF00005 ABC transporter PhaeoP54_00656 PF13333 Integrase core domain PhaeoP54_00656 PF00665 Integrase core domain PhaeoP54_00656 PF13276 HTH-like domain PhaeoP54_00658 PF03477 ATP cone domain PhaeoP54_00658 PF00317 Ribonucleotide reductase, all-alpha domain PhaeoP54_00658 PF02867 Ribonucleotide reductase, barrel domain PhaeoP54_00661 PF02887 Pyruvate kinase, alpha/beta domain PhaeoP54_00661 PF00224 Pyruvate kinase, barrel domain PhaeoP54_00663 PF01632 Ribosomal protein L35 PhaeoP54_00664 PF00453 Ribosomal protein L20 PhaeoP54_00665 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain PhaeoP54_00665 PF01409 tRNA synthetases class II core domain (F) PhaeoP54_00667 PF03484 tRNA synthetase B5 domain PhaeoP54_00667 PF03147 Ferredoxin-fold anticodon binding domain PhaeoP54_00667 PF01588 Putative tRNA binding domain PhaeoP54_00667 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain PhaeoP54_00667 PF03483 B3/4 domain PhaeoP54_00668 PF03466 LysR substrate binding domain PhaeoP54_00668 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PhaeoP54_00670 PF11071 Nucleoside 2-deoxyribosyltransferase YtoQ PhaeoP54_00672 PF05552 Conserved TM helix PhaeoP54_00672 PF00924 Mechanosensitive ion channel PhaeoP54_00673 PF01741 Large-conductance mechanosensitive channel, MscL PhaeoP54_00675 PF01235 Sodium:alanine symporter family PhaeoP54_00677 PF01037 Lrp/AsnC ligand binding domain PhaeoP54_00678 PF03150 Di-haem cytochrome c peroxidase PhaeoP54_00678 PF00034 Cytochrome c PhaeoP54_00680 PF05694 56kDa selenium binding protein (SBP56) PhaeoP54_00682 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase PhaeoP54_00682 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase PhaeoP54_00683 PF00356 Bacterial regulatory proteins, lacI family PhaeoP54_00685 PF01408 Oxidoreductase family, NAD-binding Rossmann fold PhaeoP54_00685 PF02894 Oxidoreductase family, C-terminal alpha/beta domain PhaeoP54_00686 PF01116 Fructose-bisphosphate aldolase class-II PhaeoP54_00688 PF00294 pfkB family carbohydrate kinase PhaeoP54_00689 PF00205 Thiamine pyrophosphate enzyme, central domain PhaeoP54_00689 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain PhaeoP54_00689 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain PhaeoP54_00690 PF02894 Oxidoreductase family, C-terminal alpha/beta domain PhaeoP54_00690 PF01408 Oxidoreductase family, NAD-binding Rossmann fold PhaeoP54_00692 PF01408 Oxidoreductase family, NAD-binding Rossmann fold PhaeoP54_00692 PF02894 Oxidoreductase family, C-terminal alpha/beta domain PhaeoP54_00693 PF00356 Bacterial regulatory proteins, lacI family PhaeoP54_00695 PF02653 Branched-chain amino acid transport system / permease component PhaeoP54_00696 PF00005 ABC transporter PhaeoP54_00697 PF08533 Beta-galactosidase C-terminal domain PhaeoP54_00697 PF08532 Beta-galactosidase trimerisation domain PhaeoP54_00697 PF02449 Beta-galactosidase PhaeoP54_00698 PF08450 SMP-30/Gluconolactonase/LRE-like region PhaeoP54_00699 PF01081 KDPG and KHG aldolase PhaeoP54_00702 PF00920 Dehydratase family PhaeoP54_00703 PF16875 Glycosyl hydrolase family 36 N-terminal domain PhaeoP54_00703 PF16874 Glycosyl hydrolase family 36 C-terminal domain PhaeoP54_00704 PF00528 Binding-protein-dependent transport system inner membrane component PhaeoP54_00705 PF00528 Binding-protein-dependent transport system inner membrane component PhaeoP54_00708 PF17912 MalK OB fold domain PhaeoP54_00708 PF00005 ABC transporter PhaeoP54_00711 PF01258 Prokaryotic dksA/traR C4-type zinc finger PhaeoP54_00717 PF01479 S4 domain PhaeoP54_00718 PF11953 Domain of unknown function (DUF3470) PhaeoP54_00718 PF00037 4Fe-4S binding domain PhaeoP54_00719 PF02559 CarD-like/TRCF domain PhaeoP54_00721 PF02654 Cobalamin-5-phosphate synthase PhaeoP54_00722 PF02277 Phosphoribosyltransferase PhaeoP54_00723 PF00999 Sodium/hydrogen exchanger family PhaeoP54_00723 PF02254 TrkA-N domain PhaeoP54_00726 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily PhaeoP54_00729 PF01053 Cys/Met metabolism PLP-dependent enzyme PhaeoP54_00732 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PhaeoP54_00732 PF17149 Periplasmic sensor domain found in signal transduction proteins PhaeoP54_00732 PF00512 His Kinase A (phospho-acceptor) domain PhaeoP54_00732 PF00672 HAMP domain PhaeoP54_00732 PF01627 Hpt domain PhaeoP54_00732 PF00072 Response regulator receiver domain PhaeoP54_00733 PF00765 Autoinducer synthase PhaeoP54_00734 PF01070 FMN-dependent dehydrogenase PhaeoP54_00738 PF08240 Alcohol dehydrogenase GroES-like domain PhaeoP54_00738 PF00107 Zinc-binding dehydrogenase PhaeoP54_00741 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component PhaeoP54_00742 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component PhaeoP54_00743 PF03480 Bacterial extracellular solute-binding protein, family 7 PhaeoP54_00745 PF00356 Bacterial regulatory proteins, lacI family PhaeoP54_00746 PF00202 Aminotransferase class-III PhaeoP54_00747 PF01321 Creatinase/Prolidase N-terminal domain PhaeoP54_00747 PF00557 Metallopeptidase family M24 PhaeoP54_00748 PF01546 Peptidase family M20/M25/M40 PhaeoP54_00748 PF07687 Peptidase dimerisation domain PhaeoP54_00749 PF00232 Glycosyl hydrolase family 1 PhaeoP54_00750 PF00356 Bacterial regulatory proteins, lacI family PhaeoP54_00751 PF01547 Bacterial extracellular solute-binding protein PhaeoP54_00752 PF00528 Binding-protein-dependent transport system inner membrane component PhaeoP54_00753 PF00528 Binding-protein-dependent transport system inner membrane component PhaeoP54_00754 PF00128 Alpha amylase, catalytic domain PhaeoP54_00755 PF03459 TOBE domain PhaeoP54_00755 PF17912 MalK OB fold domain PhaeoP54_00755 PF00005 ABC transporter PhaeoP54_00757 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PhaeoP54_00757 PF00512 His Kinase A (phospho-acceptor) domain PhaeoP54_00757 PF08521 Two-component sensor kinase N-terminal PhaeoP54_00758 PF00072 Response regulator receiver domain PhaeoP54_00758 PF00486 Transcriptional regulatory protein, C terminal PhaeoP54_00761 PF01970 Tripartite tricarboxylate transporter TctA family PhaeoP54_00763 PF12706 Beta-lactamase superfamily domain PhaeoP54_00764 PF01026 TatD related DNase PhaeoP54_00765 PF09115 DNA polymerase III, delta subunit, C terminal PhaeoP54_00766 PF02223 Thymidylate kinase PhaeoP54_00767 PF00768 D-alanyl-D-alanine carboxypeptidase PhaeoP54_00767 PF07943 Penicillin-binding protein 5, C-terminal domain PhaeoP54_00770 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases PhaeoP54_00774 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases PhaeoP54_00774 PF14824 Sirohaem biosynthesis protein central PhaeoP54_00774 PF10414 Sirohaem synthase dimerisation region PhaeoP54_00775 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain PhaeoP54_00775 PF07685 CobB/CobQ-like glutamine amidotransferase domain PhaeoP54_00776 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases PhaeoP54_00778 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases PhaeoP54_00779 PF02571 Precorrin-6x reductase CbiJ/CobK PhaeoP54_00780 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases PhaeoP54_00781 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases PhaeoP54_00782 PF02570 Precorrin-8X methylmutase PhaeoP54_00783 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain PhaeoP54_00784 PF02514 CobN/Magnesium Chelatase PhaeoP54_00785 PF02492 CobW/HypB/UreG, nucleotide-binding domain PhaeoP54_00785 PF07683 Cobalamin synthesis protein cobW C-terminal domain PhaeoP54_00788 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP PhaeoP54_00792 PF01266 FAD dependent oxidoreductase PhaeoP54_00792 PF16901 C-terminal domain of alpha-glycerophosphate oxidase PhaeoP54_00793 PF08220 DeoR-like helix-turn-helix domain PhaeoP54_00793 PF00455 DeoR C terminal sensor domain PhaeoP54_00801 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PhaeoP54_00801 PF03466 LysR substrate binding domain PhaeoP54_00803 PF09334 tRNA synthetases class I (M) PhaeoP54_00807 PF00248 Aldo/keto reductase family PhaeoP54_00808 PF01965 DJ-1/PfpI family PhaeoP54_00808 PF12833 Helix-turn-helix domain PhaeoP54_00809 PF05853 beta-keto acid cleavage enzyme PhaeoP54_00811 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain PhaeoP54_00811 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain PhaeoP54_00813 PF01381 Helix-turn-helix PhaeoP54_00813 PF00717 Peptidase S24-like PhaeoP54_00820 PF04542 Sigma-70 region 2 PhaeoP54_00820 PF08281 Sigma-70, region 4 PhaeoP54_00823 PF17158 Membrane-associated sensor, integral membrane domain PhaeoP54_00823 PF00990 Diguanylate cyclase, GGDEF domain PhaeoP54_00827 PF13687 Domain of unknown function (DUF4153) PhaeoP54_00829 PF03707 Bacterial signalling protein N terminal repeat PhaeoP54_00829 PF00563 EAL domain PhaeoP54_00829 PF00990 Diguanylate cyclase, GGDEF domain PhaeoP54_00832 PF17768 RecJ OB domain PhaeoP54_00832 PF02272 DHHA1 domain PhaeoP54_00832 PF01368 DHH family PhaeoP54_00833 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded PhaeoP54_00834 PF01842 ACT domain PhaeoP54_00834 PF00742 Homoserine dehydrogenase PhaeoP54_00834 PF03447 Homoserine dehydrogenase, NAD binding domain PhaeoP54_00837 PF05726 Pirin C-terminal cupin domain PhaeoP54_00837 PF02678 Pirin PhaeoP54_00842 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase PhaeoP54_00842 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain PhaeoP54_00844 PF01266 FAD dependent oxidoreductase PhaeoP54_00846 PF07992 Pyridine nucleotide-disulphide oxidoreductase PhaeoP54_00846 PF08669 Glycine cleavage T-protein C-terminal barrel domain PhaeoP54_00846 PF01571 Aminomethyltransferase folate-binding domain PhaeoP54_00846 PF17806 Sarcosine oxidase A3 domain PhaeoP54_00849 PF10410 DnaB-helicase binding domain of primase PhaeoP54_00849 PF08278 DNA primase DnaG DnaB-binding PhaeoP54_00849 PF13662 Toprim domain PhaeoP54_00849 PF08275 DNA primase catalytic core, N-terminal domain PhaeoP54_00849 PF01807 CHC2 zinc finger PhaeoP54_00850 PF04545 Sigma-70, region 4 PhaeoP54_00850 PF03979 Sigma-70 factor, region 1.1 PhaeoP54_00850 PF04539 Sigma-70 region 3 PhaeoP54_00850 PF04546 Sigma-70, non-essential region PhaeoP54_00850 PF04542 Sigma-70 region 2 PhaeoP54_00850 PF00140 Sigma-70 factor, region 1.2 PhaeoP54_00852 PF00106 short chain dehydrogenase PhaeoP54_00855 PF01894 Uncharacterised protein family UPF0047 PhaeoP54_00856 PF03477 ATP cone domain PhaeoP54_00857 PF01872 RibD C-terminal domain PhaeoP54_00857 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region PhaeoP54_00858 PF05159 Capsule polysaccharide biosynthesis protein PhaeoP54_00860 PF05159 Capsule polysaccharide biosynthesis protein PhaeoP54_00861 PF00677 Lumazine binding domain PhaeoP54_00862 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase PhaeoP54_00862 PF00925 GTP cyclohydrolase II PhaeoP54_00863 PF00885 6,7-dimethyl-8-ribityllumazine synthase PhaeoP54_00864 PF01029 NusB family PhaeoP54_00870 PF00849 RNA pseudouridylate synthase PhaeoP54_00871 PF00140 Sigma-70 factor, region 1.2 PhaeoP54_00871 PF04545 Sigma-70, region 4 PhaeoP54_00871 PF04542 Sigma-70 region 2 PhaeoP54_00872 PF00672 HAMP domain PhaeoP54_00872 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PhaeoP54_00872 PF17200 Single Cache domain 2 PhaeoP54_00873 PF08543 Phosphomethylpyrimidine kinase PhaeoP54_00874 PF00899 ThiF family PhaeoP54_00875 PF02581 Thiamine monophosphate synthase PhaeoP54_00876 PF05690 Thiazole biosynthesis protein ThiG PhaeoP54_00878 PF01266 FAD dependent oxidoreductase PhaeoP54_00879 PF13667 ThiC-associated domain PhaeoP54_00879 PF01964 Radical SAM ThiC family PhaeoP54_00881 PF04055 Radical SAM superfamily PhaeoP54_00881 PF06968 Biotin and Thiamin Synthesis associated domain PhaeoP54_00882 PF00155 Aminotransferase class I and II PhaeoP54_00884 PF06968 Biotin and Thiamin Synthesis associated domain PhaeoP54_00884 PF04055 Radical SAM superfamily PhaeoP54_00884 PF00202 Aminotransferase class-III PhaeoP54_00885 PF04301 Protein of unknown function (DUF452) PhaeoP54_00885 PF08241 Methyltransferase domain PhaeoP54_00886 PF08241 Methyltransferase domain PhaeoP54_00887 PF03459 TOBE domain PhaeoP54_00887 PF00005 ABC transporter PhaeoP54_00887 PF10649 Protein of unknown function (DUF2478) PhaeoP54_00890 PF13380 CoA binding domain PhaeoP54_00891 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase PhaeoP54_00892 PF00977 Histidine biosynthesis protein PhaeoP54_00895 PF00977 Histidine biosynthesis protein PhaeoP54_00900 PF00117 Glutamine amidotransferase class-I PhaeoP54_00901 PF00475 Imidazoleglycerol-phosphate dehydratase PhaeoP54_00903 PF00202 Aminotransferase class-III PhaeoP54_00907 PF00145 C-5 cytosine-specific DNA methylase PhaeoP54_00910 PF02785 Biotin carboxylase C-terminal domain PhaeoP54_00910 PF00682 HMGL-like PhaeoP54_00910 PF00364 Biotin-requiring enzyme PhaeoP54_00910 PF00289 Biotin carboxylase, N-terminal domain PhaeoP54_00910 PF02436 Conserved carboxylase domain PhaeoP54_00910 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain PhaeoP54_00912 PF01070 FMN-dependent dehydrogenase PhaeoP54_00913 PF00990 Diguanylate cyclase, GGDEF domain PhaeoP54_00914 PF13361 UvrD-like helicase C-terminal domain PhaeoP54_00914 PF00580 UvrD/REP helicase N-terminal domain PhaeoP54_00917 PF10609 NUBPL iron-transfer P-loop NTPase PhaeoP54_00917 PF01883 Iron-sulfur cluster assembly protein PhaeoP54_00918 PF02381 MraZ protein, putative antitoxin-like PhaeoP54_00919 PF01795 MraW methylase family PhaeoP54_00921 PF03717 Penicillin-binding Protein dimerisation domain PhaeoP54_00921 PF00905 Penicillin binding protein transpeptidase domain PhaeoP54_00922 PF08245 Mur ligase middle domain PhaeoP54_00922 PF01225 Mur ligase family, catalytic domain PhaeoP54_00922 PF02875 Mur ligase family, glutamate ligase domain PhaeoP54_00923 PF01225 Mur ligase family, catalytic domain PhaeoP54_00923 PF02875 Mur ligase family, glutamate ligase domain PhaeoP54_00923 PF08245 Mur ligase middle domain PhaeoP54_00924 PF00953 Glycosyl transferase family 4 PhaeoP54_00924 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 PhaeoP54_00925 PF04960 Glutaminase PhaeoP54_00926 PF08245 Mur ligase middle domain PhaeoP54_00926 PF02875 Mur ligase family, glutamate ligase domain PhaeoP54_00927 PF01047 MarR family PhaeoP54_00930 PF01098 Cell cycle protein PhaeoP54_00931 PF03033 Glycosyltransferase family 28 N-terminal domain PhaeoP54_00931 PF04101 Glycosyltransferase family 28 C-terminal domain PhaeoP54_00932 PF01225 Mur ligase family, catalytic domain PhaeoP54_00932 PF08245 Mur ligase middle domain PhaeoP54_00932 PF02875 Mur ligase family, glutamate ligase domain PhaeoP54_00935 PF01565 FAD binding domain PhaeoP54_00935 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain PhaeoP54_00936 PF07478 D-ala D-ala ligase C-terminus PhaeoP54_00936 PF01820 D-ala D-ala ligase N-terminus PhaeoP54_00937 PF03799 Cell division protein FtsQ PhaeoP54_00938 PF02491 SHS2 domain inserted in FTSA PhaeoP54_00939 PF12327 FtsZ family, C-terminal domain PhaeoP54_00939 PF00091 Tubulin/FtsZ family, GTPase domain PhaeoP54_00940 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase PhaeoP54_00941 PF13525 Outer membrane lipoprotein PhaeoP54_00942 PF13476 AAA domain PhaeoP54_00942 PF02463 RecF/RecN/SMC N terminal domain PhaeoP54_00943 PF00654 Voltage gated chloride channel PhaeoP54_00946 PF05195 Aminopeptidase P, N-terminal domain PhaeoP54_00946 PF00557 Metallopeptidase family M24 PhaeoP54_00947 PF06213 Cobalamin biosynthesis protein CobT PhaeoP54_00947 PF11775 Cobalamin biosynthesis protein CobT VWA domain PhaeoP54_00948 PF07728 AAA domain (dynein-related subfamily) PhaeoP54_00948 PF08406 CbbQ/NirQ/NorQ C-terminal PhaeoP54_00948 PF12556 Cobaltochelatase CobS subunit N terminal PhaeoP54_00949 PF00270 DEAD/DEAH box helicase PhaeoP54_00949 PF00271 Helicase conserved C-terminal domain PhaeoP54_00951 PF00226 DnaJ domain PhaeoP54_00954 PF02637 GatB domain PhaeoP54_00954 PF02934 GatB/GatE catalytic domain PhaeoP54_00955 PF09371 Tex-like protein N-terminal domain PhaeoP54_00955 PF00575 S1 RNA binding domain PhaeoP54_00955 PF17674 HHH domain PhaeoP54_00955 PF16921 Tex protein YqgF-like domain PhaeoP54_00958 PF01433 Peptidase family M1 domain PhaeoP54_00958 PF17432 Domain of unknown function (DUF3458_C) ARM repeats PhaeoP54_00958 PF11940 Domain of unknown function (DUF3458) Ig-like fold PhaeoP54_00960 PF01274 Malate synthase PhaeoP54_00962 PF07722 Peptidase C26 PhaeoP54_00963 PF13442 Cytochrome C oxidase, cbb3-type, subunit III PhaeoP54_00963 PF00034 Cytochrome c PhaeoP54_00963 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase PhaeoP54_00964 PF01799 [2Fe-2S] binding domain PhaeoP54_00964 PF00111 2Fe-2S iron-sulfur cluster binding domain PhaeoP54_00965 PF00440 Bacterial regulatory proteins, tetR family PhaeoP54_00966 PF03301 Tryptophan 2,3-dioxygenase PhaeoP54_00967 PF00266 Aminotransferase class-V PhaeoP54_00969 PF00106 short chain dehydrogenase PhaeoP54_00973 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch PhaeoP54_00973 PF01262 Alanine dehydrogenase/PNT, C-terminal domain PhaeoP54_00973 PF05222 Alanine dehydrogenase/PNT, N-terminal domain PhaeoP54_00974 PF02233 NAD(P) transhydrogenase beta subunit PhaeoP54_00976 PF13411 MerR HTH family regulatory protein PhaeoP54_00977 PF02627 Carboxymuconolactone decarboxylase family PhaeoP54_00979 PF04143 Sulphur transport PhaeoP54_00980 PF00528 Binding-protein-dependent transport system inner membrane component PhaeoP54_00980 PF12911 N-terminal TM domain of oligopeptide transport permease C PhaeoP54_00981 PF00528 Binding-protein-dependent transport system inner membrane component PhaeoP54_00982 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle PhaeoP54_00983 PF00005 ABC transporter PhaeoP54_00983 PF08352 Oligopeptide/dipeptide transporter, C-terminal region PhaeoP54_00984 PF07687 Peptidase dimerisation domain PhaeoP54_00984 PF01546 Peptidase family M20/M25/M40 PhaeoP54_00985 PF01546 Peptidase family M20/M25/M40 PhaeoP54_00985 PF07687 Peptidase dimerisation domain PhaeoP54_00986 PF01546 Peptidase family M20/M25/M40 PhaeoP54_00986 PF07687 Peptidase dimerisation domain PhaeoP54_00987 PF07687 Peptidase dimerisation domain PhaeoP54_00987 PF01546 Peptidase family M20/M25/M40 PhaeoP54_00988 PF00534 Glycosyl transferases group 1 PhaeoP54_00989 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) PhaeoP54_00990 PF04055 Radical SAM superfamily PhaeoP54_00990 PF06463 Molybdenum Cofactor Synthesis C PhaeoP54_00993 PF01380 SIS domain PhaeoP54_00994 PF12804 MobA-like NTP transferase domain PhaeoP54_00994 PF00132 Bacterial transferase hexapeptide (six repeats) PhaeoP54_00995 PF13419 Haloacid dehalogenase-like hydrolase PhaeoP54_00996 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family PhaeoP54_00998 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PhaeoP54_00998 PF02770 Acyl-CoA dehydrogenase, middle domain PhaeoP54_00998 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PhaeoP54_00999 PF03922 OmpW family PhaeoP54_01000 PF13193 AMP-binding enzyme C-terminal domain PhaeoP54_01000 PF00501 AMP-binding enzyme PhaeoP54_01002 PF01039 Carboxyl transferase domain PhaeoP54_01003 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain PhaeoP54_01003 PF00364 Biotin-requiring enzyme PhaeoP54_01003 PF00289 Biotin carboxylase, N-terminal domain PhaeoP54_01003 PF02785 Biotin carboxylase C-terminal domain PhaeoP54_01004 PF00682 HMGL-like PhaeoP54_01006 PF00378 Enoyl-CoA hydratase/isomerase PhaeoP54_01007 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 PhaeoP54_01008 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit PhaeoP54_01009 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit PhaeoP54_01010 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit PhaeoP54_01013 PF10531 SLBB domain PhaeoP54_01013 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region PhaeoP54_01013 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit PhaeoP54_01016 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal PhaeoP54_01016 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region PhaeoP54_01016 PF00384 Molybdopterin oxidoreductase PhaeoP54_01018 PF00146 NADH dehydrogenase PhaeoP54_01019 PF12838 4Fe-4S dicluster domain PhaeoP54_01020 PF02627 Carboxymuconolactone decarboxylase family PhaeoP54_01021 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 PhaeoP54_01022 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L PhaeoP54_01023 PF00361 Proton-conducting membrane transporter PhaeoP54_01023 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus PhaeoP54_01024 PF00361 Proton-conducting membrane transporter PhaeoP54_01025 PF00361 Proton-conducting membrane transporter PhaeoP54_01026 PF02237 Biotin protein ligase C terminal domain PhaeoP54_01026 PF03099 Biotin/lipoate A/B protein ligase family PhaeoP54_01027 PF03309 Type III pantothenate kinase PhaeoP54_01028 PF12706 Beta-lactamase superfamily domain PhaeoP54_01028 PF17770 Ribonuclease J C-terminal domain PhaeoP54_01028 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain PhaeoP54_01030 PF00270 DEAD/DEAH box helicase PhaeoP54_01030 PF00271 Helicase conserved C-terminal domain PhaeoP54_01033 PF03144 Elongation factor Tu domain 2 PhaeoP54_01033 PF16658 Class II release factor RF3, C-terminal domain PhaeoP54_01033 PF00009 Elongation factor Tu GTP binding domain PhaeoP54_01037 PF08713 DNA alkylation repair enzyme PhaeoP54_01039 PF08402 TOBE domain PhaeoP54_01039 PF00005 ABC transporter PhaeoP54_01042 PF02416 mttA/Hcf106 family PhaeoP54_01043 PF02416 mttA/Hcf106 family PhaeoP54_01044 PF00902 Sec-independent protein translocase protein (TatC) PhaeoP54_01045 PF02502 Ribose/Galactose Isomerase PhaeoP54_01049 PF01975 Survival protein SurE PhaeoP54_01050 PF00106 short chain dehydrogenase PhaeoP54_01054 PF13537 Glutamine amidotransferase domain PhaeoP54_01054 PF00156 Phosphoribosyl transferase domain PhaeoP54_01057 PF06745 KaiC PhaeoP54_01057 PF18073 Rubredoxin metal binding domain PhaeoP54_01060 PF00005 ABC transporter PhaeoP54_01061 PF02405 Permease MlaE PhaeoP54_01062 PF01168 Alanine racemase, N-terminal domain PhaeoP54_01062 PF00842 Alanine racemase, C-terminal domain PhaeoP54_01063 PF03796 DnaB-like helicase C terminal domain PhaeoP54_01063 PF00772 DnaB-like helicase N terminal domain PhaeoP54_01064 PF00156 Phosphoribosyl transferase domain PhaeoP54_01065 PF01979 Amidohydrolase family PhaeoP54_01071 PF03193 RsgA GTPase PhaeoP54_01078 PF07724 AAA domain (Cdc48 subfamily) PhaeoP54_01078 PF17871 AAA lid domain PhaeoP54_01078 PF02861 Clp amino terminal domain, pathogenicity island component PhaeoP54_01078 PF00004 ATPase family associated with various cellular activities (AAA) PhaeoP54_01078 PF10431 C-terminal, D2-small domain, of ClpB protein PhaeoP54_01079 PF01258 Prokaryotic dksA/traR C4-type zinc finger PhaeoP54_01080 PF01494 FAD binding domain PhaeoP54_01082 PF00313 'Cold-shock' DNA-binding domain PhaeoP54_01087 PF01521 Iron-sulphur cluster biosynthesis PhaeoP54_01088 PF13286 Phosphohydrolase-associated domain PhaeoP54_01088 PF01966 HD domain PhaeoP54_01090 PF03485 Arginyl tRNA synthetase N terminal domain PhaeoP54_01090 PF00750 tRNA synthetases class I (R) PhaeoP54_01090 PF05746 DALR anticodon binding domain PhaeoP54_01092 PF00933 Glycosyl hydrolase family 3 N terminal domain PhaeoP54_01093 PF02616 Segregation and condensation protein ScpA PhaeoP54_01094 PF04079 Segregation and condensation complex subunit ScpB PhaeoP54_01098 PF13411 MerR HTH family regulatory protein PhaeoP54_01099 PF00216 Bacterial DNA-binding protein PhaeoP54_01100 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III PhaeoP54_01100 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal PhaeoP54_01101 PF02504 Fatty acid synthesis protein PhaeoP54_01102 PF01783 Ribosomal L32p protein family PhaeoP54_01109 PF00106 short chain dehydrogenase PhaeoP54_01111 PF00579 tRNA synthetases class I (W and Y) PhaeoP54_01112 PF03702 Anhydro-N-acetylmuramic acid kinase PhaeoP54_01114 PF02696 Uncharacterized ACR, YdiU/UPF0061 family PhaeoP54_01117 PF00270 DEAD/DEAH box helicase PhaeoP54_01117 PF00271 Helicase conserved C-terminal domain PhaeoP54_01118 PF01475 Ferric uptake regulator family PhaeoP54_01119 PF00892 EamA-like transporter family PhaeoP54_01120 PF00113 Enolase, C-terminal TIM barrel domain PhaeoP54_01120 PF03952 Enolase, N-terminal domain PhaeoP54_01126 PF04229 GrpB protein PhaeoP54_01126 PF13673 Acetyltransferase (GNAT) domain PhaeoP54_01127 PF01156 Inosine-uridine preferring nucleoside hydrolase PhaeoP54_01128 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family PhaeoP54_01129 PF01266 FAD dependent oxidoreductase PhaeoP54_01130 PF00120 Glutamine synthetase, catalytic domain PhaeoP54_01131 PF02540 NAD synthase PhaeoP54_01131 PF00958 GMP synthase C terminal domain PhaeoP54_01131 PF00117 Glutamine amidotransferase class-I PhaeoP54_01132 PF00120 Glutamine synthetase, catalytic domain PhaeoP54_01133 PF00528 Binding-protein-dependent transport system inner membrane component PhaeoP54_01134 PF00528 Binding-protein-dependent transport system inner membrane component PhaeoP54_01135 PF00497 Bacterial extracellular solute-binding proteins, family 3 PhaeoP54_01136 PF00005 ABC transporter PhaeoP54_01141 PF10458 Valyl tRNA synthetase tRNA binding arm PhaeoP54_01141 PF08264 Anticodon-binding domain of tRNA PhaeoP54_01141 PF00133 tRNA synthetases class I (I, L, M and V) PhaeoP54_01142 PF01037 Lrp/AsnC ligand binding domain PhaeoP54_01142 PF13404 AsnC-type helix-turn-helix domain PhaeoP54_01147 PF03796 DnaB-like helicase C terminal domain PhaeoP54_01149 PF02219 Methylenetetrahydrofolate reductase PhaeoP54_01150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PhaeoP54_01150 PF03466 LysR substrate binding domain PhaeoP54_01151 PF00459 Inositol monophosphatase family PhaeoP54_01154 PF00171 Aldehyde dehydrogenase family PhaeoP54_01154 PF14850 DNA-binding domain of Proline dehydrogenase PhaeoP54_01154 PF18327 Proline utilization A proline dehydrogenase N-terminal domain PhaeoP54_01154 PF01619 Proline dehydrogenase PhaeoP54_01155 PF01037 Lrp/AsnC ligand binding domain PhaeoP54_01159 PF00072 Response regulator receiver domain PhaeoP54_01159 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PhaeoP54_01159 PF01627 Hpt domain PhaeoP54_01159 PF00512 His Kinase A (phospho-acceptor) domain PhaeoP54_01160 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PhaeoP54_01160 PF08447 PAS fold PhaeoP54_01160 PF13426 PAS domain PhaeoP54_01168 PF00464 Serine hydroxymethyltransferase PhaeoP54_01169 PF01513 ATP-NAD kinase PhaeoP54_01170 PF01425 Amidase PhaeoP54_01171 PF13193 AMP-binding enzyme C-terminal domain PhaeoP54_01171 PF16177 Acetyl-coenzyme A synthetase N-terminus PhaeoP54_01171 PF00501 AMP-binding enzyme PhaeoP54_01172 PF01515 Phosphate acetyl/butaryl transferase PhaeoP54_01172 PF03949 Malic enzyme, NAD binding domain PhaeoP54_01172 PF00390 Malic enzyme, N-terminal domain PhaeoP54_01174 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region PhaeoP54_01175 PF02885 Glycosyl transferase family, helical bundle domain PhaeoP54_01175 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain PhaeoP54_01175 PF00591 Glycosyl transferase family, a/b domain PhaeoP54_01176 PF01676 Metalloenzyme superfamily PhaeoP54_01180 PF00501 AMP-binding enzyme PhaeoP54_01180 PF13193 AMP-binding enzyme C-terminal domain PhaeoP54_01183 PF00378 Enoyl-CoA hydratase/isomerase PhaeoP54_01183 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain PhaeoP54_01183 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain PhaeoP54_01184 PF02803 Thiolase, C-terminal domain PhaeoP54_01184 PF00108 Thiolase, N-terminal domain PhaeoP54_01185 PF00043 Glutathione S-transferase, C-terminal domain PhaeoP54_01185 PF02798 Glutathione S-transferase, N-terminal domain PhaeoP54_01186 PF02770 Acyl-CoA dehydrogenase, middle domain PhaeoP54_01186 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PhaeoP54_01186 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PhaeoP54_01188 PF02770 Acyl-CoA dehydrogenase, middle domain PhaeoP54_01188 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PhaeoP54_01188 PF12806 Acetyl-CoA dehydrogenase C-terminal like PhaeoP54_01188 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PhaeoP54_01189 PF13411 MerR HTH family regulatory protein PhaeoP54_01190 PF00376 MerR family regulatory protein PhaeoP54_01190 PF09278 MerR, DNA binding PhaeoP54_01193 PF01554 MatE PhaeoP54_01194 PF03960 ArsC family PhaeoP54_01195 PF01180 Dihydroorotate dehydrogenase PhaeoP54_01197 PF02872 5'-nucleotidase, C-terminal domain PhaeoP54_01197 PF00149 Calcineurin-like phosphoesterase PhaeoP54_01201 PF00586 AIR synthase related protein, N-terminal domain PhaeoP54_01201 PF02769 AIR synthase related protein, C-terminal domain PhaeoP54_01202 PF03334 Na+/H+ antiporter subunit PhaeoP54_01203 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) PhaeoP54_01205 PF00361 Proton-conducting membrane transporter PhaeoP54_01206 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L PhaeoP54_01207 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus PhaeoP54_01207 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter PhaeoP54_01207 PF13244 Domain of unknown function (DUF4040) PhaeoP54_01207 PF00361 Proton-conducting membrane transporter PhaeoP54_01210 PF13506 Glycosyl transferase family 21 PhaeoP54_01211 PF04349 Periplasmic glucan biosynthesis protein, MdoG PhaeoP54_01214 PF02515 CoA-transferase family III PhaeoP54_01215 PF00205 Thiamine pyrophosphate enzyme, central domain PhaeoP54_01215 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain PhaeoP54_01215 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain PhaeoP54_01217 PF04143 Sulphur transport PhaeoP54_01218 PF01022 Bacterial regulatory protein, arsR family PhaeoP54_01220 PF02683 Cytochrome C biogenesis protein transmembrane region PhaeoP54_01226 PF02872 5'-nucleotidase, C-terminal domain PhaeoP54_01226 PF00149 Calcineurin-like phosphoesterase PhaeoP54_01228 PF00034 Cytochrome c PhaeoP54_01229 PF00012 Hsp70 protein PhaeoP54_01231 PF01965 DJ-1/PfpI family PhaeoP54_01231 PF12833 Helix-turn-helix domain PhaeoP54_01232 PF00574 Clp protease PhaeoP54_01233 PF07724 AAA domain (Cdc48 subfamily) PhaeoP54_01233 PF06689 ClpX C4-type zinc finger PhaeoP54_01233 PF10431 C-terminal, D2-small domain, of ClpB protein PhaeoP54_01239 PF03588 Leucyl/phenylalanyl-tRNA protein transferase PhaeoP54_01240 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain PhaeoP54_01240 PF00289 Biotin carboxylase, N-terminal domain PhaeoP54_01240 PF02785 Biotin carboxylase C-terminal domain PhaeoP54_01241 PF00364 Biotin-requiring enzyme PhaeoP54_01243 PF00005 ABC transporter PhaeoP54_01244 PF00005 ABC transporter PhaeoP54_01244 PF12399 Branched-chain amino acid ATP-binding cassette transporter PhaeoP54_01246 PF02653 Branched-chain amino acid transport system / permease component PhaeoP54_01249 PF00072 Response regulator receiver domain PhaeoP54_01249 PF00486 Transcriptional regulatory protein, C terminal PhaeoP54_01251 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PhaeoP54_01251 PF00512 His Kinase A (phospho-acceptor) domain PhaeoP54_01251 PF13426 PAS domain PhaeoP54_01251 PF00672 HAMP domain PhaeoP54_01255 PF04143 Sulphur transport PhaeoP54_01256 PF00753 Metallo-beta-lactamase superfamily PhaeoP54_01259 PF10073 Uncharacterized protein conserved in bacteria (DUF2312) PhaeoP54_01260 PF01042 Endoribonuclease L-PSP PhaeoP54_01261 PF07992 Pyridine nucleotide-disulphide oxidoreductase PhaeoP54_01261 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster PhaeoP54_01262 PF01180 Dihydroorotate dehydrogenase PhaeoP54_01263 PF08362 YcdC-like protein, C-terminal region PhaeoP54_01263 PF00440 Bacterial regulatory proteins, tetR family PhaeoP54_01264 PF07687 Peptidase dimerisation domain PhaeoP54_01264 PF01546 Peptidase family M20/M25/M40 PhaeoP54_01265 PF01979 Amidohydrolase family PhaeoP54_01266 PF00005 ABC transporter PhaeoP54_01267 PF00528 Binding-protein-dependent transport system inner membrane component PhaeoP54_01268 PF00528 Binding-protein-dependent transport system inner membrane component PhaeoP54_01269 PF09084 NMT1/THI5 like PhaeoP54_01272 PF01613 Flavin reductase like domain PhaeoP54_01273 PF05191 Adenylate kinase, active site lid PhaeoP54_01274 PF13193 AMP-binding enzyme C-terminal domain PhaeoP54_01274 PF00501 AMP-binding enzyme PhaeoP54_01274 PF16177 Acetyl-coenzyme A synthetase N-terminus PhaeoP54_01277 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component PhaeoP54_01280 PF00072 Response regulator receiver domain PhaeoP54_01280 PF00486 Transcriptional regulatory protein, C terminal PhaeoP54_01281 PF00672 HAMP domain PhaeoP54_01281 PF00512 His Kinase A (phospho-acceptor) domain PhaeoP54_01281 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PhaeoP54_01282 PF07690 Major Facilitator Superfamily PhaeoP54_01285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PhaeoP54_01285 PF00672 HAMP domain PhaeoP54_01285 PF00512 His Kinase A (phospho-acceptor) domain PhaeoP54_01286 PF01408 Oxidoreductase family, NAD-binding Rossmann fold PhaeoP54_01286 PF02894 Oxidoreductase family, C-terminal alpha/beta domain PhaeoP54_01287 PF00392 Bacterial regulatory proteins, gntR family PhaeoP54_01287 PF00155 Aminotransferase class I and II PhaeoP54_01288 PF00296 Luciferase-like monooxygenase PhaeoP54_01289 PF00248 Aldo/keto reductase family PhaeoP54_01290 PF01613 Flavin reductase like domain PhaeoP54_01292 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component PhaeoP54_01293 PF03480 Bacterial extracellular solute-binding protein, family 7 PhaeoP54_01296 PF08125 Mannitol dehydrogenase C-terminal domain PhaeoP54_01296 PF01232 Mannitol dehydrogenase Rossmann domain PhaeoP54_01298 PF00005 ABC transporter PhaeoP54_01298 PF08402 TOBE domain PhaeoP54_01299 PF00528 Binding-protein-dependent transport system inner membrane component PhaeoP54_01300 PF00528 Binding-protein-dependent transport system inner membrane component PhaeoP54_01302 PF00356 Bacterial regulatory proteins, lacI family PhaeoP54_01304 PF03466 LysR substrate binding domain PhaeoP54_01304 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PhaeoP54_01305 PF00753 Metallo-beta-lactamase superfamily PhaeoP54_01306 PF02769 AIR synthase related protein, C-terminal domain PhaeoP54_01306 PF00586 AIR synthase related protein, N-terminal domain PhaeoP54_01307 PF00551 Formyl transferase PhaeoP54_01309 PF00570 HRDC domain PhaeoP54_01309 PF01612 3'-5' exonuclease PhaeoP54_01311 PF02657 Fe-S metabolism associated domain PhaeoP54_01315 PF02310 B12 binding domain PhaeoP54_01315 PF02607 B12 binding domain PhaeoP54_01316 PF04055 Radical SAM superfamily PhaeoP54_01317 PF00809 Pterin binding enzyme PhaeoP54_01317 PF02310 B12 binding domain PhaeoP54_01317 PF02965 Vitamin B12 dependent methionine synthase, activation domain PhaeoP54_01317 PF02607 B12 binding domain PhaeoP54_01317 PF02574 Homocysteine S-methyltransferase PhaeoP54_01320 PF01259 SAICAR synthetase PhaeoP54_01321 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase PhaeoP54_01323 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PhaeoP54_01323 PF00512 His Kinase A (phospho-acceptor) domain PhaeoP54_01323 PF02743 Cache domain PhaeoP54_01324 PF00072 Response regulator receiver domain PhaeoP54_01324 PF02954 Bacterial regulatory protein, Fis family PhaeoP54_01324 PF00158 Sigma-54 interaction domain PhaeoP54_01325 PF10150 Ribonuclease E/G family PhaeoP54_01325 PF00575 S1 RNA binding domain PhaeoP54_01325 PF12111 Polyribonucleotide phosphorylase C terminal PhaeoP54_01327 PF01206 Sulfurtransferase TusA PhaeoP54_01328 PF02683 Cytochrome C biogenesis protein transmembrane region PhaeoP54_01330 PF00067 Cytochrome P450 PhaeoP54_01333 PF00206 Lyase PhaeoP54_01333 PF10415 Fumarase C C-terminus PhaeoP54_01336 PF02417 Chromate transporter PhaeoP54_01339 PF00005 ABC transporter PhaeoP54_01340 PF00005 ABC transporter PhaeoP54_01340 PF02687 FtsX-like permease family PhaeoP54_01340 PF12704 MacB-like periplasmic core domain PhaeoP54_01350 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain PhaeoP54_01350 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain PhaeoP54_01353 PF13193 AMP-binding enzyme C-terminal domain PhaeoP54_01353 PF00501 AMP-binding enzyme PhaeoP54_01355 PF13193 AMP-binding enzyme C-terminal domain PhaeoP54_01355 PF00501 AMP-binding enzyme PhaeoP54_01357 PF00501 AMP-binding enzyme PhaeoP54_01357 PF13193 AMP-binding enzyme C-terminal domain PhaeoP54_01360 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PhaeoP54_01360 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PhaeoP54_01360 PF02770 Acyl-CoA dehydrogenase, middle domain PhaeoP54_01361 PF01648 4'-phosphopantetheinyl transferase superfamily PhaeoP54_01363 PF12833 Helix-turn-helix domain PhaeoP54_01363 PF02311 AraC-like ligand binding domain PhaeoP54_01366 PF07729 FCD domain PhaeoP54_01366 PF00392 Bacterial regulatory proteins, gntR family PhaeoP54_01367 PF00107 Zinc-binding dehydrogenase PhaeoP54_01368 PF02028 BCCT, betaine/carnitine/choline family transporter PhaeoP54_01370 PF00266 Aminotransferase class-V PhaeoP54_01371 PF03441 FAD binding domain of DNA photolyase PhaeoP54_01371 PF00875 DNA photolyase PhaeoP54_01374 PF00293 NUDIX domain PhaeoP54_01375 PF00291 Pyridoxal-phosphate dependent enzyme PhaeoP54_01375 PF00571 CBS domain PhaeoP54_01376 PF12795 Mechanosensitive ion channel porin domain PhaeoP54_01376 PF00924 Mechanosensitive ion channel PhaeoP54_01376 PF12794 Mechanosensitive ion channel inner membrane domain 1 PhaeoP54_01377 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain PhaeoP54_01377 PF02272 DHHA1 domain PhaeoP54_01377 PF01411 tRNA synthetases class II (A) PhaeoP54_01380 PF01261 Xylose isomerase-like TIM barrel PhaeoP54_01381 PF02782 FGGY family of carbohydrate kinases, C-terminal domain PhaeoP54_01381 PF00370 FGGY family of carbohydrate kinases, N-terminal domain PhaeoP54_01384 PF16350 FAD dependent oxidoreductase central domain PhaeoP54_01384 PF08669 Glycine cleavage T-protein C-terminal barrel domain PhaeoP54_01384 PF01266 FAD dependent oxidoreductase PhaeoP54_01384 PF01571 Aminomethyltransferase folate-binding domain PhaeoP54_01385 PF01595 Cyclin M transmembrane N-terminal domain PhaeoP54_01385 PF03471 Transporter associated domain PhaeoP54_01385 PF00571 CBS domain PhaeoP54_01386 PF02899 Phage integrase, N-terminal SAM-like domain PhaeoP54_01386 PF00589 Phage integrase family PhaeoP54_01389 PF01202 Shikimate kinase PhaeoP54_01390 PF01761 3-dehydroquinate synthase PhaeoP54_01391 PF00672 HAMP domain PhaeoP54_01391 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PhaeoP54_01392 PF00436 Single-strand binding protein family PhaeoP54_01393 PF10145 Phage-related minor tail protein PhaeoP54_01393 PF01464 Transglycosylase SLT domain PhaeoP54_01393 PF01551 Peptidase family M23 PhaeoP54_01395 PF00005 ABC transporter PhaeoP54_01395 PF08352 Oligopeptide/dipeptide transporter, C-terminal region PhaeoP54_01396 PF12911 N-terminal TM domain of oligopeptide transport permease C PhaeoP54_01396 PF00528 Binding-protein-dependent transport system inner membrane component PhaeoP54_01397 PF00528 Binding-protein-dependent transport system inner membrane component PhaeoP54_01398 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle PhaeoP54_01401 PF00696 Amino acid kinase family PhaeoP54_01402 PF01765 Ribosome recycling factor PhaeoP54_01403 PF01255 Putative undecaprenyl diphosphate synthase PhaeoP54_01405 PF13288 DXP reductoisomerase C-terminal domain PhaeoP54_01405 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase PhaeoP54_01405 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain PhaeoP54_01406 PF02163 Peptidase family M50 PhaeoP54_01406 PF17820 PDZ domain PhaeoP54_01408 PF07244 Surface antigen variable number repeat PhaeoP54_01408 PF01103 Surface antigen PhaeoP54_01410 PF07977 FabA-like domain PhaeoP54_01411 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 PhaeoP54_01411 PF00132 Bacterial transferase hexapeptide (six repeats) PhaeoP54_01412 PF06230 LpxI C-terminal domain PhaeoP54_01412 PF17930 LpxI N-terminal domain PhaeoP54_01413 PF02684 Lipid-A-disaccharide synthetase PhaeoP54_01416 PF00486 Transcriptional regulatory protein, C terminal PhaeoP54_01416 PF00072 Response regulator receiver domain PhaeoP54_01417 PF03120 NAD-dependent DNA ligase OB-fold domain PhaeoP54_01417 PF01653 NAD-dependent DNA ligase adenylation domain PhaeoP54_01417 PF12826 Helix-hairpin-helix motif PhaeoP54_01417 PF03119 NAD-dependent DNA ligase C4 zinc finger domain PhaeoP54_01417 PF00533 BRCA1 C Terminus (BRCT) domain PhaeoP54_01418 PF00271 Helicase conserved C-terminal domain PhaeoP54_01418 PF17191 RecG wedge domain PhaeoP54_01418 PF00270 DEAD/DEAH box helicase PhaeoP54_01421 PF01502 Phosphoribosyl-AMP cyclohydrolase PhaeoP54_01422 PF00749 tRNA synthetases class I (E and Q), catalytic domain PhaeoP54_01424 PF01134 Glucose inhibited division protein A PhaeoP54_01425 PF00378 Enoyl-CoA hydratase/isomerase PhaeoP54_01427 PF02666 Phosphatidylserine decarboxylase PhaeoP54_01428 PF17284 Spermidine synthase tetramerisation domain PhaeoP54_01429 PF02675 S-adenosylmethionine decarboxylase PhaeoP54_01431 PF00155 Aminotransferase class I and II PhaeoP54_01431 PF00392 Bacterial regulatory proteins, gntR family PhaeoP54_01438 PF00572 Ribosomal protein L13 PhaeoP54_01439 PF00380 Ribosomal protein S9/S16 PhaeoP54_01440 PF13977 BetI-type transcriptional repressor, C-terminal PhaeoP54_01440 PF00440 Bacterial regulatory proteins, tetR family PhaeoP54_01441 PF03976 Polyphosphate kinase 2 (PPK2) PhaeoP54_01442 PF00561 alpha/beta hydrolase fold PhaeoP54_01443 PF04204 Homoserine O-succinyltransferase PhaeoP54_01448 PF00117 Glutamine amidotransferase class-I PhaeoP54_01448 PF00958 GMP synthase C terminal domain PhaeoP54_01448 PF02540 NAD synthase PhaeoP54_01449 PF06253 Trimethylamine methyltransferase (MTTB) PhaeoP54_01452 PF08534 Redoxin PhaeoP54_01453 PF04055 Radical SAM superfamily PhaeoP54_01453 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family PhaeoP54_01454 PF01546 Peptidase family M20/M25/M40 PhaeoP54_01454 PF07687 Peptidase dimerisation domain PhaeoP54_01458 PF03364 Polyketide cyclase / dehydrase and lipid transport PhaeoP54_01459 PF00909 Ammonium Transporter Family PhaeoP54_01460 PF00994 Probable molybdopterin binding domain PhaeoP54_01460 PF02464 Competence-damaged protein PhaeoP54_01460 PF18146 Damage-inducible protein CinA KH domain PhaeoP54_01461 PF04608 Phosphatidylglycerophosphatase A PhaeoP54_01462 PF02542 YgbB family PhaeoP54_01462 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase PhaeoP54_01463 PF01207 Dihydrouridine synthase (Dus) PhaeoP54_01464 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PhaeoP54_01464 PF00512 His Kinase A (phospho-acceptor) domain PhaeoP54_01465 PF00072 Response regulator receiver domain PhaeoP54_01465 PF02954 Bacterial regulatory protein, Fis family PhaeoP54_01465 PF14532 Sigma-54 interaction domain PhaeoP54_01466 PF00672 HAMP domain PhaeoP54_01466 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PhaeoP54_01466 PF00512 His Kinase A (phospho-acceptor) domain PhaeoP54_01466 PF00989 PAS fold PhaeoP54_01467 PF00072 Response regulator receiver domain PhaeoP54_01467 PF02954 Bacterial regulatory protein, Fis family PhaeoP54_01467 PF00158 Sigma-54 interaction domain PhaeoP54_01469 PF02080 TrkA-C domain PhaeoP54_01469 PF02254 TrkA-N domain PhaeoP54_01470 PF02386 Cation transport protein PhaeoP54_01471 PF17209 Hfq protein PhaeoP54_01472 PF01926 50S ribosome-binding GTPase PhaeoP54_01472 PF13167 GTP-binding GTPase N-terminal PhaeoP54_01472 PF16360 GTP-binding GTPase Middle Region PhaeoP54_01473 PF01804 Penicillin amidase PhaeoP54_01474 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase PhaeoP54_01474 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase PhaeoP54_01476 PF00490 Delta-aminolevulinic acid dehydratase PhaeoP54_01478 PF02559 CarD-like/TRCF domain PhaeoP54_01478 PF00270 DEAD/DEAH box helicase PhaeoP54_01478 PF00271 Helicase conserved C-terminal domain PhaeoP54_01478 PF03461 TRCF domain PhaeoP54_01478 PF17757 UvrB interaction domain PhaeoP54_01479 PF07690 Major Facilitator Superfamily PhaeoP54_01481 PF13193 AMP-binding enzyme C-terminal domain PhaeoP54_01481 PF00501 AMP-binding enzyme PhaeoP54_01484 PF00230 Major intrinsic protein PhaeoP54_01487 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle PhaeoP54_01491 PF04227 Indigoidine synthase A like protein PhaeoP54_01497 PF02628 Cytochrome oxidase assembly protein PhaeoP54_01498 PF02074 Carboxypeptidase Taq (M32) metallopeptidase PhaeoP54_01500 PF03989 DNA gyrase C-terminal domain, beta-propeller PhaeoP54_01500 PF00521 DNA gyrase/topoisomerase IV, subunit A PhaeoP54_01501 PF06233 Usg-like family PhaeoP54_01502 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain PhaeoP54_01502 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain PhaeoP54_01503 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase PhaeoP54_01507 PF02515 CoA-transferase family III PhaeoP54_01508 PF00571 CBS domain PhaeoP54_01508 PF00478 IMP dehydrogenase / GMP reductase domain PhaeoP54_01509 PF01189 16S rRNA methyltransferase RsmB/F PhaeoP54_01509 PF01029 NusB family PhaeoP54_01510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PhaeoP54_01510 PF00512 His Kinase A (phospho-acceptor) domain PhaeoP54_01510 PF08448 PAS fold PhaeoP54_01510 PF13188 PAS domain PhaeoP54_01510 PF00072 Response regulator receiver domain PhaeoP54_01512 PF00154 recA bacterial DNA recombination protein PhaeoP54_01513 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain PhaeoP54_01513 PF02272 DHHA1 domain PhaeoP54_01513 PF01411 tRNA synthetases class II (A) PhaeoP54_01517 PF00893 Small Multidrug Resistance protein PhaeoP54_01520 PF02129 X-Pro dipeptidyl-peptidase (S15 family) PhaeoP54_01523 PF00266 Aminotransferase class-V PhaeoP54_01524 PF01458 Uncharacterized protein family (UPF0051) PhaeoP54_01526 PF01906 Putative heavy-metal-binding PhaeoP54_01527 PF00005 ABC transporter PhaeoP54_01528 PF01458 Uncharacterized protein family (UPF0051) PhaeoP54_01531 PF00266 Aminotransferase class-V PhaeoP54_01535 PF00829 Ribosomal prokaryotic L21 protein PhaeoP54_01536 PF01016 Ribosomal L27 protein PhaeoP54_01538 PF01926 50S ribosome-binding GTPase PhaeoP54_01538 PF01018 GTP1/OBG PhaeoP54_01539 PF01472 PUA domain PhaeoP54_01539 PF00696 Amino acid kinase family PhaeoP54_01540 PF00171 Aldehyde dehydrogenase family PhaeoP54_01541 PF10090 Histidine phosphotransferase C-terminal domain PhaeoP54_01545 PF00318 Ribosomal protein S2 PhaeoP54_01546 PF00889 Elongation factor TS PhaeoP54_01547 PF00196 Bacterial regulatory proteins, luxR family PhaeoP54_01547 PF03472 Autoinducer binding domain PhaeoP54_01548 PF01220 Dehydroquinase class II PhaeoP54_01549 PF00107 Zinc-binding dehydrogenase PhaeoP54_01549 PF08240 Alcohol dehydrogenase GroES-like domain PhaeoP54_01549 PF16197 Ketoacyl-synthetase C-terminal extension PhaeoP54_01549 PF00109 Beta-ketoacyl synthase, N-terminal domain PhaeoP54_01549 PF02801 Beta-ketoacyl synthase, C-terminal domain PhaeoP54_01549 PF08659 KR domain PhaeoP54_01549 PF00550 Phosphopantetheine attachment site PhaeoP54_01549 PF14765 Polyketide synthase dehydratase PhaeoP54_01549 PF00698 Acyl transferase domain PhaeoP54_01553 PF00378 Enoyl-CoA hydratase/isomerase PhaeoP54_01554 PF00144 Beta-lactamase PhaeoP54_01558 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PhaeoP54_01558 PF02770 Acyl-CoA dehydrogenase, middle domain PhaeoP54_01558 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PhaeoP54_01559 PF03466 LysR substrate binding domain PhaeoP54_01559 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PhaeoP54_01560 PF00486 Transcriptional regulatory protein, C terminal PhaeoP54_01560 PF00072 Response regulator receiver domain PhaeoP54_01561 PF01895 PhoU domain PhaeoP54_01562 PF00005 ABC transporter PhaeoP54_01563 PF00528 Binding-protein-dependent transport system inner membrane component PhaeoP54_01564 PF00528 Binding-protein-dependent transport system inner membrane component PhaeoP54_01566 PF16736 Single Cache-like PhaeoP54_01566 PF00989 PAS fold PhaeoP54_01566 PF00512 His Kinase A (phospho-acceptor) domain PhaeoP54_01566 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PhaeoP54_01567 PF01053 Cys/Met metabolism PLP-dependent enzyme PhaeoP54_01568 PF00132 Bacterial transferase hexapeptide (six repeats) PhaeoP54_01569 PF00625 Guanylate kinase PhaeoP54_01570 PF03755 YicC-like family, N-terminal region PhaeoP54_01570 PF08340 Domain of unknown function (DUF1732) PhaeoP54_01572 PF01474 Class-II DAHP synthetase family PhaeoP54_01573 PF01965 DJ-1/PfpI family PhaeoP54_01573 PF12833 Helix-turn-helix domain PhaeoP54_01574 PF07995 Glucose / Sorbosone dehydrogenase PhaeoP54_01576 PF00005 ABC transporter PhaeoP54_01576 PF12399 Branched-chain amino acid ATP-binding cassette transporter PhaeoP54_01577 PF00005 ABC transporter PhaeoP54_01578 PF02653 Branched-chain amino acid transport system / permease component PhaeoP54_01580 PF05872 Bacterial protein of unknown function (DUF853) PhaeoP54_01582 PF02801 Beta-ketoacyl synthase, C-terminal domain PhaeoP54_01582 PF00109 Beta-ketoacyl synthase, N-terminal domain PhaeoP54_01583 PF00550 Phosphopantetheine attachment site PhaeoP54_01584 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD PhaeoP54_01584 PF00132 Bacterial transferase hexapeptide (six repeats) PhaeoP54_01585 PF03734 L,D-transpeptidase catalytic domain PhaeoP54_01586 PF05951 Bacterial protein of unknown function (DUF882) PhaeoP54_01589 PF02219 Methylenetetrahydrofolate reductase PhaeoP54_01591 PF02541 Ppx/GppA phosphatase family PhaeoP54_01592 PF01728 FtsJ-like methyltransferase PhaeoP54_01595 PF13091 PLD-like domain PhaeoP54_01598 PF00005 ABC transporter PhaeoP54_01601 PF00582 Universal stress protein family PhaeoP54_01604 PF00941 FAD binding domain in molybdopterin dehydrogenase PhaeoP54_01604 PF03450 CO dehydrogenase flavoprotein C-terminal domain PhaeoP54_01605 PF00111 2Fe-2S iron-sulfur cluster binding domain PhaeoP54_01605 PF01799 [2Fe-2S] binding domain PhaeoP54_01606 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase PhaeoP54_01606 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain PhaeoP54_01608 PF01008 Initiation factor 2 subunit family PhaeoP54_01610 PF01244 Membrane dipeptidase (Peptidase family M19) PhaeoP54_01611 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle PhaeoP54_01612 PF00528 Binding-protein-dependent transport system inner membrane component PhaeoP54_01613 PF12911 N-terminal TM domain of oligopeptide transport permease C PhaeoP54_01613 PF00528 Binding-protein-dependent transport system inner membrane component PhaeoP54_01614 PF08352 Oligopeptide/dipeptide transporter, C-terminal region PhaeoP54_01614 PF00005 ABC transporter PhaeoP54_01615 PF08352 Oligopeptide/dipeptide transporter, C-terminal region PhaeoP54_01615 PF00005 ABC transporter PhaeoP54_01618 PF09335 SNARE associated Golgi protein PhaeoP54_01621 PF00491 Arginase family PhaeoP54_01623 PF02423 Ornithine cyclodeaminase/mu-crystallin family PhaeoP54_01625 PF00849 RNA pseudouridylate synthase PhaeoP54_01628 PF07690 Major Facilitator Superfamily PhaeoP54_01630 PF00682 HMGL-like PhaeoP54_01630 PF08502 LeuA allosteric (dimerisation) domain PhaeoP54_01631 PF01406 tRNA synthetases class I (C) catalytic domain PhaeoP54_01636 PF00005 ABC transporter PhaeoP54_01637 PF00005 ABC transporter PhaeoP54_01637 PF12399 Branched-chain amino acid ATP-binding cassette transporter PhaeoP54_01638 PF11862 Domain of unknown function (DUF3382) PhaeoP54_01638 PF02653 Branched-chain amino acid transport system / permease component PhaeoP54_01639 PF02653 Branched-chain amino acid transport system / permease component PhaeoP54_01643 PF01739 CheR methyltransferase, SAM binding domain PhaeoP54_01643 PF03705 CheR methyltransferase, all-alpha domain PhaeoP54_01643 PF01339 CheB methylesterase PhaeoP54_01643 PF08448 PAS fold PhaeoP54_01645 PF01053 Cys/Met metabolism PLP-dependent enzyme PhaeoP54_01646 PF01037 Lrp/AsnC ligand binding domain PhaeoP54_01647 PF00211 Adenylate and Guanylate cyclase catalytic domain PhaeoP54_01652 PF17912 MalK OB fold domain PhaeoP54_01652 PF00005 ABC transporter PhaeoP54_01653 PF00528 Binding-protein-dependent transport system inner membrane component PhaeoP54_01654 PF00528 Binding-protein-dependent transport system inner membrane component PhaeoP54_01656 PF01053 Cys/Met metabolism PLP-dependent enzyme PhaeoP54_01657 PF00392 Bacterial regulatory proteins, gntR family PhaeoP54_01657 PF07729 FCD domain PhaeoP54_01658 PF00909 Ammonium Transporter Family PhaeoP54_01659 PF07690 Major Facilitator Superfamily PhaeoP54_01660 PF02867 Ribonucleotide reductase, barrel domain PhaeoP54_01660 PF08471 Class II vitamin B12-dependent ribonucleotide reductase PhaeoP54_01663 PF00313 'Cold-shock' DNA-binding domain PhaeoP54_01664 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region PhaeoP54_01664 PF01243 Pyridoxamine 5'-phosphate oxidase PhaeoP54_01667 PF00156 Phosphoribosyl transferase domain PhaeoP54_01670 PF00425 chorismate binding enzyme PhaeoP54_01670 PF04715 Anthranilate synthase component I, N terminal region PhaeoP54_01672 PF00117 Glutamine amidotransferase class-I PhaeoP54_01673 PF02885 Glycosyl transferase family, helical bundle domain PhaeoP54_01673 PF00591 Glycosyl transferase family, a/b domain PhaeoP54_01674 PF03167 Uracil DNA glycosylase superfamily PhaeoP54_01675 PF00218 Indole-3-glycerol phosphate synthase PhaeoP54_01676 PF01967 MoaC family PhaeoP54_01677 PF00994 Probable molybdopterin binding domain PhaeoP54_01677 PF03453 MoeA N-terminal region (domain I and II) PhaeoP54_01677 PF03454 MoeA C-terminal region (domain IV) PhaeoP54_01678 PF01726 LexA DNA binding domain PhaeoP54_01678 PF00717 Peptidase S24-like PhaeoP54_01679 PF00753 Metallo-beta-lactamase superfamily PhaeoP54_01679 PF13567 Domain of unknown function (DUF4131) PhaeoP54_01679 PF03772 Competence protein PhaeoP54_01680 PF00749 tRNA synthetases class I (E and Q), catalytic domain PhaeoP54_01681 PF00285 Citrate synthase, C-terminal domain PhaeoP54_01683 PF00378 Enoyl-CoA hydratase/isomerase PhaeoP54_01684 PF03918 Cytochrome C biogenesis protein PhaeoP54_01685 PF01578 Cytochrome C assembly protein PhaeoP54_01685 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal PhaeoP54_01688 PF03100 CcmE PhaeoP54_01689 PF01118 Semialdehyde dehydrogenase, NAD binding domain PhaeoP54_01689 PF02774 Semialdehyde dehydrogenase, dimerisation domain PhaeoP54_01690 PF01177 Asp/Glu/Hydantoin racemase PhaeoP54_01693 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PhaeoP54_01693 PF03466 LysR substrate binding domain PhaeoP54_01695 PF00586 AIR synthase related protein, N-terminal domain PhaeoP54_01695 PF02769 AIR synthase related protein, C-terminal domain PhaeoP54_01695 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain PhaeoP54_01696 PF00805 Pentapeptide repeats (8 copies) PhaeoP54_01697 PF01722 BolA-like protein PhaeoP54_01699 PF00462 Glutaredoxin PhaeoP54_01704 PF02779 Transketolase, pyrimidine binding domain PhaeoP54_01704 PF02780 Transketolase, C-terminal domain PhaeoP54_01704 PF00456 Transketolase, thiamine diphosphate binding domain PhaeoP54_01705 PF00850 Histone deacetylase domain PhaeoP54_01708 PF00005 ABC transporter PhaeoP54_01709 PF00005 ABC transporter PhaeoP54_01711 PF00196 Bacterial regulatory proteins, luxR family PhaeoP54_01715 PF01638 HxlR-like helix-turn-helix PhaeoP54_01717 PF04264 YceI-like domain PhaeoP54_01718 PF05661 Protein of unknown function (DUF808) PhaeoP54_01719 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain PhaeoP54_01719 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain PhaeoP54_01721 PF01467 Cytidylyltransferase-like PhaeoP54_01722 PF00478 IMP dehydrogenase / GMP reductase domain PhaeoP54_01722 PF00571 CBS domain PhaeoP54_01724 PF00171 Aldehyde dehydrogenase family PhaeoP54_01725 PF00487 Fatty acid desaturase PhaeoP54_01726 PF03734 L,D-transpeptidase catalytic domain PhaeoP54_01728 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PhaeoP54_01728 PF02770 Acyl-CoA dehydrogenase, middle domain PhaeoP54_01728 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PhaeoP54_01730 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase PhaeoP54_01730 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase PhaeoP54_01731 PF17760 UvrA interaction domain PhaeoP54_01731 PF17755 UvrA DNA-binding domain PhaeoP54_01733 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain PhaeoP54_01733 PF07992 Pyridine nucleotide-disulphide oxidoreductase PhaeoP54_01736 PF02547 Queuosine biosynthesis protein PhaeoP54_01738 PF00578 AhpC/TSA family PhaeoP54_01739 PF04305 Protein of unknown function (DUF455) PhaeoP54_01740 PF01551 Peptidase family M23 PhaeoP54_01740 PF04225 Opacity-associated protein A LysM-like domain PhaeoP54_01745 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD PhaeoP54_01746 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD PhaeoP54_01747 PF00162 Phosphoglycerate kinase PhaeoP54_01748 PF04977 Septum formation initiator PhaeoP54_01749 PF00676 Dehydrogenase E1 component PhaeoP54_01750 PF00364 Biotin-requiring enzyme PhaeoP54_01750 PF02779 Transketolase, pyrimidine binding domain PhaeoP54_01750 PF02780 Transketolase, C-terminal domain PhaeoP54_01751 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) PhaeoP54_01751 PF02817 e3 binding domain PhaeoP54_01751 PF00364 Biotin-requiring enzyme PhaeoP54_01754 PF01168 Alanine racemase, N-terminal domain PhaeoP54_01760 PF00027 Cyclic nucleotide-binding domain PhaeoP54_01760 PF13545 Crp-like helix-turn-helix domain PhaeoP54_01763 PF00132 Bacterial transferase hexapeptide (six repeats) PhaeoP54_01763 PF06426 Serine acetyltransferase, N-terminal PhaeoP54_01779 PF04860 Phage portal protein PhaeoP54_01782 PF02618 YceG-like family PhaeoP54_01783 PF02801 Beta-ketoacyl synthase, C-terminal domain PhaeoP54_01783 PF00109 Beta-ketoacyl synthase, N-terminal domain PhaeoP54_01785 PF00977 Histidine biosynthesis protein PhaeoP54_01786 PF00550 Phosphopantetheine attachment site PhaeoP54_01789 PF00698 Acyl transferase domain PhaeoP54_01792 PF04264 YceI-like domain PhaeoP54_01795 PF01250 Ribosomal protein S6 PhaeoP54_01796 PF01084 Ribosomal protein S18 PhaeoP54_01797 PF03948 Ribosomal protein L9, C-terminal domain PhaeoP54_01797 PF01281 Ribosomal protein L9, N-terminal domain PhaeoP54_01800 PF02872 5'-nucleotidase, C-terminal domain PhaeoP54_01800 PF00149 Calcineurin-like phosphoesterase PhaeoP54_01802 PF05697 Bacterial trigger factor protein (TF) PhaeoP54_01802 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase PhaeoP54_01802 PF05698 Bacterial trigger factor protein (TF) C-terminus PhaeoP54_01804 PF00672 HAMP domain PhaeoP54_01804 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PhaeoP54_01806 PF03853 YjeF-related protein N-terminus PhaeoP54_01807 PF00543 Nitrogen regulatory protein P-II PhaeoP54_01808 PF00120 Glutamine synthetase, catalytic domain PhaeoP54_01808 PF03951 Glutamine synthetase, beta-Grasp domain PhaeoP54_01811 PF00557 Metallopeptidase family M24 PhaeoP54_01814 PF10397 Adenylosuccinate lyase C-terminus PhaeoP54_01814 PF00206 Lyase PhaeoP54_01819 PF00330 Aconitase family (aconitate hydratase) PhaeoP54_01819 PF00694 Aconitase C-terminal domain PhaeoP54_01821 PF08534 Redoxin PhaeoP54_01823 PF01578 Cytochrome C assembly protein PhaeoP54_01824 PF03379 CcmB protein PhaeoP54_01825 PF00005 ABC transporter PhaeoP54_01826 PF04430 Protein of unknown function (DUF498/DUF598) PhaeoP54_01827 PF02355 Protein export membrane protein PhaeoP54_01827 PF07549 SecD/SecF GG Motif PhaeoP54_01828 PF02355 Protein export membrane protein PhaeoP54_01829 PF02699 Preprotein translocase subunit PhaeoP54_01831 PF02403 Seryl-tRNA synthetase N-terminal domain PhaeoP54_01831 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) PhaeoP54_01833 PF00487 Fatty acid desaturase PhaeoP54_01834 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal PhaeoP54_01834 PF01926 50S ribosome-binding GTPase PhaeoP54_01835 PF13360 PQQ-like domain PhaeoP54_01838 PF00873 AcrB/AcrD/AcrF family PhaeoP54_01840 PF00664 ABC transporter transmembrane region PhaeoP54_01840 PF00005 ABC transporter PhaeoP54_01842 PF03641 Possible lysine decarboxylase PhaeoP54_01845 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain PhaeoP54_01845 PF02777 Iron/manganese superoxide dismutases, C-terminal domain PhaeoP54_01849 PF08669 Glycine cleavage T-protein C-terminal barrel domain PhaeoP54_01849 PF17806 Sarcosine oxidase A3 domain PhaeoP54_01849 PF07992 Pyridine nucleotide-disulphide oxidoreductase PhaeoP54_01849 PF01571 Aminomethyltransferase folate-binding domain PhaeoP54_01851 PF01266 FAD dependent oxidoreductase PhaeoP54_01853 PF03652 Holliday junction resolvase PhaeoP54_01857 PF01925 Sulfite exporter TauE/SafE PhaeoP54_01858 PF01207 Dihydrouridine synthase (Dus) PhaeoP54_01862 PF17149 Periplasmic sensor domain found in signal transduction proteins PhaeoP54_01862 PF00672 HAMP domain PhaeoP54_01862 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PhaeoP54_01862 PF00512 His Kinase A (phospho-acceptor) domain PhaeoP54_01862 PF01627 Hpt domain PhaeoP54_01862 PF00072 Response regulator receiver domain PhaeoP54_01864 PF00196 Bacterial regulatory proteins, luxR family PhaeoP54_01864 PF00072 Response regulator receiver domain PhaeoP54_01866 PF02322 Cytochrome bd terminal oxidase subunit II PhaeoP54_01867 PF01654 Cytochrome bd terminal oxidase subunit I PhaeoP54_01870 PF00916 Sulfate permease family PhaeoP54_01870 PF01740 STAS domain PhaeoP54_01873 PF01679 Proteolipid membrane potential modulator PhaeoP54_01875 PF00334 Nucleoside diphosphate kinase PhaeoP54_01876 PF12848 ABC transporter PhaeoP54_01876 PF00005 ABC transporter PhaeoP54_01877 PF01914 MarC family integral membrane protein PhaeoP54_01880 PF00883 Cytosol aminopeptidase family, catalytic domain PhaeoP54_01884 PF09312 SurA N-terminal domain PhaeoP54_01885 PF04166 Pyridoxal phosphate biosynthetic protein PdxA PhaeoP54_01886 PF00398 Ribosomal RNA adenine dimethylase PhaeoP54_01889 PF17827 PrmC N-terminal domain PhaeoP54_01889 PF05175 Methyltransferase small domain PhaeoP54_01890 PF00472 RF-1 domain PhaeoP54_01890 PF03462 PCRF domain PhaeoP54_01893 PF00491 Arginase family PhaeoP54_01894 PF00491 Arginase family PhaeoP54_01895 PF01546 Peptidase family M20/M25/M40 PhaeoP54_01895 PF07687 Peptidase dimerisation domain PhaeoP54_01896 PF03819 MazG nucleotide pyrophosphohydrolase domain PhaeoP54_01898 PF00296 Luciferase-like monooxygenase PhaeoP54_01900 PF17785 PUA-like domain PhaeoP54_01900 PF10672 S-adenosylmethionine-dependent methyltransferase PhaeoP54_01902 PF03710 Glutamate-ammonia ligase adenylyltransferase PhaeoP54_01902 PF08335 GlnD PII-uridylyltransferase PhaeoP54_01903 PF02492 CobW/HypB/UreG, nucleotide-binding domain PhaeoP54_01903 PF07683 Cobalamin synthesis protein cobW C-terminal domain PhaeoP54_01906 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PhaeoP54_01906 PF03466 LysR substrate binding domain PhaeoP54_01907 PF00005 ABC transporter PhaeoP54_01907 PF08402 TOBE domain PhaeoP54_01909 PF00528 Binding-protein-dependent transport system inner membrane component PhaeoP54_01910 PF00528 Binding-protein-dependent transport system inner membrane component PhaeoP54_01911 PF02913 FAD linked oxidases, C-terminal domain PhaeoP54_01911 PF01565 FAD binding domain PhaeoP54_01912 PF01370 NAD dependent epimerase/dehydratase family PhaeoP54_01913 PF16363 GDP-mannose 4,6 dehydratase PhaeoP54_01914 PF00483 Nucleotidyl transferase PhaeoP54_01915 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family PhaeoP54_01925 PF04377 Arginine-tRNA-protein transferase, C terminus PhaeoP54_01925 PF04376 Arginine-tRNA-protein transferase, N terminus PhaeoP54_01926 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily PhaeoP54_01927 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component PhaeoP54_01929 PF03480 Bacterial extracellular solute-binding protein, family 7 PhaeoP54_01930 PF17200 Single Cache domain 2 PhaeoP54_01930 PF07730 Histidine kinase PhaeoP54_01931 PF00196 Bacterial regulatory proteins, luxR family PhaeoP54_01931 PF00072 Response regulator receiver domain PhaeoP54_01932 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain PhaeoP54_01932 PF00205 Thiamine pyrophosphate enzyme, central domain PhaeoP54_01932 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain PhaeoP54_01933 PF01842 ACT domain PhaeoP54_01933 PF10369 Small subunit of acetolactate synthase PhaeoP54_01937 PF01425 Amidase PhaeoP54_01938 PF03462 PCRF domain PhaeoP54_01938 PF00472 RF-1 domain PhaeoP54_01939 PF17092 Penicillin-binding protein OB-like domain PhaeoP54_01939 PF00905 Penicillin binding protein transpeptidase domain PhaeoP54_01939 PF00912 Transglycosylase PhaeoP54_01940 PF01520 N-acetylmuramoyl-L-alanine amidase PhaeoP54_01945 PF04551 GcpE protein PhaeoP54_01947 PF00155 Aminotransferase class I and II PhaeoP54_01954 PF00300 Histidine phosphatase superfamily (branch 1) PhaeoP54_01956 PF01037 Lrp/AsnC ligand binding domain PhaeoP54_01957 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase PhaeoP54_01957 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain PhaeoP54_01959 PF03848 Tellurite resistance protein TehB PhaeoP54_01962 PF02190 ATP-dependent protease La (LON) substrate-binding domain PhaeoP54_01962 PF05362 Lon protease (S16) C-terminal proteolytic domain PhaeoP54_01962 PF00004 ATPase family associated with various cellular activities (AAA) PhaeoP54_01966 PF01702 Queuine tRNA-ribosyltransferase PhaeoP54_01967 PF01145 SPFH domain / Band 7 family PhaeoP54_01970 PF02492 CobW/HypB/UreG, nucleotide-binding domain PhaeoP54_01970 PF07683 Cobalamin synthesis protein cobW C-terminal domain PhaeoP54_01971 PF01883 Iron-sulfur cluster assembly protein PhaeoP54_01973 PF01521 Iron-sulphur cluster biosynthesis PhaeoP54_01974 PF00121 Triosephosphate isomerase PhaeoP54_01975 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component PhaeoP54_01976 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component PhaeoP54_01977 PF03480 Bacterial extracellular solute-binding protein, family 7 PhaeoP54_01978 PF00158 Sigma-54 interaction domain PhaeoP54_01978 PF02954 Bacterial regulatory protein, Fis family PhaeoP54_01978 PF00072 Response regulator receiver domain PhaeoP54_01979 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PhaeoP54_01979 PF02743 Cache domain PhaeoP54_01979 PF00512 His Kinase A (phospho-acceptor) domain PhaeoP54_01980 PF00067 Cytochrome P450 PhaeoP54_01982 PF01037 Lrp/AsnC ligand binding domain PhaeoP54_01983 PF10414 Sirohaem synthase dimerisation region PhaeoP54_01983 PF14824 Sirohaem biosynthesis protein central PhaeoP54_01983 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases PhaeoP54_01985 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain PhaeoP54_01985 PF01077 Nitrite and sulphite reductase 4Fe-4S domain PhaeoP54_01986 PF01507 Phosphoadenosine phosphosulfate reductase family PhaeoP54_01988 PF00970 Oxidoreductase FAD-binding domain PhaeoP54_01988 PF00175 Oxidoreductase NAD-binding domain PhaeoP54_01991 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment PhaeoP54_01993 PF05198 Translation initiation factor IF-3, N-terminal domain PhaeoP54_01993 PF00707 Translation initiation factor IF-3, C-terminal domain PhaeoP54_01994 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PhaeoP54_01994 PF12729 Four helix bundle sensory module for signal transduction PhaeoP54_01994 PF00672 HAMP domain PhaeoP54_01995 PF00941 FAD binding domain in molybdopterin dehydrogenase PhaeoP54_01995 PF03450 CO dehydrogenase flavoprotein C-terminal domain PhaeoP54_01996 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain PhaeoP54_01996 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase PhaeoP54_01997 PF00111 2Fe-2S iron-sulfur cluster binding domain PhaeoP54_01997 PF01799 [2Fe-2S] binding domain PhaeoP54_01999 PF13478 XdhC Rossmann domain PhaeoP54_01999 PF02625 XdhC and CoxI family PhaeoP54_02002 PF00561 alpha/beta hydrolase fold PhaeoP54_02002 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus PhaeoP54_02005 PF00561 alpha/beta hydrolase fold PhaeoP54_02009 PF02824 TGS domain PhaeoP54_02009 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) PhaeoP54_02009 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain PhaeoP54_02009 PF03129 Anticodon binding domain PhaeoP54_02011 PF05114 Protein of unknown function (DUF692) PhaeoP54_02015 PF03960 ArsC family PhaeoP54_02016 PF00313 'Cold-shock' DNA-binding domain PhaeoP54_02017 PF00171 Aldehyde dehydrogenase family PhaeoP54_02018 PF00296 Luciferase-like monooxygenase PhaeoP54_02019 PF01613 Flavin reductase like domain PhaeoP54_02020 PF12697 Alpha/beta hydrolase family PhaeoP54_02022 PF00392 Bacterial regulatory proteins, gntR family PhaeoP54_02022 PF07729 FCD domain PhaeoP54_02026 PF00557 Metallopeptidase family M24 PhaeoP54_02027 PF00186 Dihydrofolate reductase PhaeoP54_02028 PF00303 Thymidylate synthase PhaeoP54_02031 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily PhaeoP54_02032 PF12802 MarR family PhaeoP54_02034 PF00717 Peptidase S24-like PhaeoP54_02034 PF01381 Helix-turn-helix PhaeoP54_02041 PF03466 LysR substrate binding domain PhaeoP54_02041 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PhaeoP54_02043 PF01554 MatE PhaeoP54_02047 PF00204 DNA gyrase B PhaeoP54_02047 PF01751 Toprim domain PhaeoP54_02047 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PhaeoP54_02047 PF00986 DNA gyrase B subunit, carboxyl terminus PhaeoP54_02051 PF04879 Molybdopterin oxidoreductase Fe4S4 domain PhaeoP54_02051 PF01568 Molydopterin dinucleotide binding domain PhaeoP54_02051 PF00384 Molybdopterin oxidoreductase PhaeoP54_02053 PF00005 ABC transporter PhaeoP54_02054 PF12704 MacB-like periplasmic core domain PhaeoP54_02054 PF02687 FtsX-like permease family PhaeoP54_02055 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) PhaeoP54_02055 PF03129 Anticodon binding domain PhaeoP54_02056 PF01594 AI-2E family transporter PhaeoP54_02058 PF02541 Ppx/GppA phosphatase family PhaeoP54_02061 PF00226 DnaJ domain PhaeoP54_02061 PF05099 Tellurite resistance protein TerB PhaeoP54_02068 PF00289 Biotin carboxylase, N-terminal domain PhaeoP54_02068 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain PhaeoP54_02068 PF02785 Biotin carboxylase C-terminal domain PhaeoP54_02073 PF01039 Carboxyl transferase domain PhaeoP54_02074 PF08548 Peptidase M10 serralysin C terminal PhaeoP54_02074 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) PhaeoP54_02075 PF07690 Major Facilitator Superfamily PhaeoP54_02076 PF01381 Helix-turn-helix PhaeoP54_02076 PF06114 IrrE N-terminal-like domain PhaeoP54_02076 PF09856 Predicted transcriptional regulator (DUF2083) PhaeoP54_02079 PF00732 GMC oxidoreductase PhaeoP54_02079 PF05199 GMC oxidoreductase PhaeoP54_02080 PF00171 Aldehyde dehydrogenase family PhaeoP54_02081 PF00884 Sulfatase PhaeoP54_02081 PF12411 Choline sulfatase enzyme C terminal PhaeoP54_02083 PF13977 BetI-type transcriptional repressor, C-terminal PhaeoP54_02083 PF00440 Bacterial regulatory proteins, tetR family PhaeoP54_02085 PF00892 EamA-like transporter family PhaeoP54_02089 PF13673 Acetyltransferase (GNAT) domain PhaeoP54_02090 PF01709 Transcriptional regulator PhaeoP54_02091 PF02080 TrkA-C domain PhaeoP54_02091 PF03600 Citrate transporter PhaeoP54_02092 PF00890 FAD binding domain PhaeoP54_02093 PF02080 TrkA-C domain PhaeoP54_02093 PF03600 Citrate transporter PhaeoP54_02094 PF13277 YmdB-like protein PhaeoP54_02095 PF01812 5-formyltetrahydrofolate cyclo-ligase family PhaeoP54_02096 PF00571 CBS domain PhaeoP54_02096 PF03448 MgtE intracellular N domain PhaeoP54_02096 PF01769 Divalent cation transporter PhaeoP54_02097 PF01979 Amidohydrolase family PhaeoP54_02098 PF01979 Amidohydrolase family PhaeoP54_02099 PF00459 Inositol monophosphatase family PhaeoP54_02100 PF01381 Helix-turn-helix PhaeoP54_02101 PF16197 Ketoacyl-synthetase C-terminal extension PhaeoP54_02101 PF02801 Beta-ketoacyl synthase, C-terminal domain PhaeoP54_02101 PF00109 Beta-ketoacyl synthase, N-terminal domain PhaeoP54_02101 PF00550 Phosphopantetheine attachment site PhaeoP54_02101 PF08240 Alcohol dehydrogenase GroES-like domain PhaeoP54_02101 PF08659 KR domain PhaeoP54_02101 PF00698 Acyl transferase domain PhaeoP54_02101 PF14765 Polyketide synthase dehydratase PhaeoP54_02102 PF03466 LysR substrate binding domain PhaeoP54_02102 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PhaeoP54_02105 PF01027 Inhibitor of apoptosis-promoting Bax1 PhaeoP54_02107 PF00471 Ribosomal protein L33 PhaeoP54_02109 PF01510 N-acetylmuramoyl-L-alanine amidase PhaeoP54_02111 PF01425 Amidase PhaeoP54_02112 PF02686 Glu-tRNAGln amidotransferase C subunit PhaeoP54_02113 PF12706 Beta-lactamase superfamily domain PhaeoP54_02114 PF03352 Methyladenine glycosylase PhaeoP54_02115 PF14437 MafB19-like deaminase PhaeoP54_02116 PF01479 S4 domain PhaeoP54_02116 PF00849 RNA pseudouridylate synthase PhaeoP54_02118 PF05816 Toxic anion resistance protein (TelA) PhaeoP54_02124 PF02580 D-Tyr-tRNA(Tyr) deacylase PhaeoP54_02125 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle PhaeoP54_02126 PF00528 Binding-protein-dependent transport system inner membrane component PhaeoP54_02127 PF00528 Binding-protein-dependent transport system inner membrane component PhaeoP54_02127 PF12911 N-terminal TM domain of oligopeptide transport permease C PhaeoP54_02128 PF00005 ABC transporter PhaeoP54_02128 PF08352 Oligopeptide/dipeptide transporter, C-terminal region PhaeoP54_02131 PF07859 alpha/beta hydrolase fold PhaeoP54_02132 PF13193 AMP-binding enzyme C-terminal domain PhaeoP54_02132 PF00501 AMP-binding enzyme PhaeoP54_02133 PF00005 ABC transporter PhaeoP54_02133 PF00664 ABC transporter transmembrane region PhaeoP54_02139 PF00072 Response regulator receiver domain PhaeoP54_02140 PF13581 Histidine kinase-like ATPase domain PhaeoP54_02140 PF07568 Histidine kinase PhaeoP54_02140 PF13426 PAS domain PhaeoP54_02178 PF02768 DNA polymerase III beta subunit, C-terminal domain PhaeoP54_02178 PF02767 DNA polymerase III beta subunit, central domain PhaeoP54_02178 PF00712 DNA polymerase III beta subunit, N-terminal domain PhaeoP54_02185 PF00072 Response regulator receiver domain PhaeoP54_02185 PF00196 Bacterial regulatory proteins, luxR family PhaeoP54_02187 PF00072 Response regulator receiver domain PhaeoP54_02187 PF00989 PAS fold PhaeoP54_02187 PF00512 His Kinase A (phospho-acceptor) domain PhaeoP54_02187 PF18415 Histidine kinase receptor ArcB trans-membrane domain PhaeoP54_02187 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PhaeoP54_02187 PF01627 Hpt domain PhaeoP54_02191 PF08220 DeoR-like helix-turn-helix domain PhaeoP54_02191 PF00455 DeoR C terminal sensor domain PhaeoP54_02192 PF04069 Substrate binding domain of ABC-type glycine betaine transport system PhaeoP54_02193 PF00005 ABC transporter PhaeoP54_02193 PF00571 CBS domain PhaeoP54_02194 PF00528 Binding-protein-dependent transport system inner membrane component PhaeoP54_02196 PF01571 Aminomethyltransferase folate-binding domain PhaeoP54_02196 PF08669 Glycine cleavage T-protein C-terminal barrel domain PhaeoP54_02196 PF01266 FAD dependent oxidoreductase PhaeoP54_02196 PF16350 FAD dependent oxidoreductase central domain PhaeoP54_02197 PF12833 Helix-turn-helix domain PhaeoP54_02198 PF00459 Inositol monophosphatase family PhaeoP54_02200 PF00120 Glutamine synthetase, catalytic domain PhaeoP54_02200 PF03951 Glutamine synthetase, beta-Grasp domain PhaeoP54_02201 PF00171 Aldehyde dehydrogenase family PhaeoP54_02207 PF08669 Glycine cleavage T-protein C-terminal barrel domain PhaeoP54_02207 PF01571 Aminomethyltransferase folate-binding domain PhaeoP54_02207 PF16350 FAD dependent oxidoreductase central domain PhaeoP54_02207 PF01266 FAD dependent oxidoreductase PhaeoP54_02208 PF08220 DeoR-like helix-turn-helix domain PhaeoP54_02208 PF00455 DeoR C terminal sensor domain PhaeoP54_02212 PF00501 AMP-binding enzyme PhaeoP54_02212 PF13193 AMP-binding enzyme C-terminal domain PhaeoP54_02213 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PhaeoP54_02213 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PhaeoP54_02213 PF02770 Acyl-CoA dehydrogenase, middle domain PhaeoP54_02214 PF00378 Enoyl-CoA hydratase/isomerase PhaeoP54_02217 PF01494 FAD binding domain PhaeoP54_02218 PF00391 PEP-utilising enzyme, mobile domain PhaeoP54_02218 PF05524 PEP-utilising enzyme, N-terminal PhaeoP54_02218 PF02896 PEP-utilising enzyme, TIM barrel domain PhaeoP54_02219 PF00696 Amino acid kinase family PhaeoP54_02219 PF01842 ACT domain PhaeoP54_02219 PF13840 ACT domain PhaeoP54_02220 PF02386 Cation transport protein PhaeoP54_02222 PF02649 Type I GTP cyclohydrolase folE2 PhaeoP54_02223 PF01053 Cys/Met metabolism PLP-dependent enzyme PhaeoP54_02225 PF04279 Intracellular septation protein A PhaeoP54_02227 PF02881 SRP54-type protein, helical bundle domain PhaeoP54_02227 PF00448 SRP54-type protein, GTPase domain PhaeoP54_02230 PF13742 OB-fold nucleic acid binding domain PhaeoP54_02230 PF02601 Exonuclease VII, large subunit PhaeoP54_02231 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain PhaeoP54_02231 PF02843 Phosphoribosylglycinamide synthetase, C domain PhaeoP54_02231 PF02844 Phosphoribosylglycinamide synthetase, N domain PhaeoP54_02232 PF01062 Bestrophin, RFP-TM, chloride channel PhaeoP54_02233 PF00196 Bacterial regulatory proteins, luxR family PhaeoP54_02233 PF00072 Response regulator receiver domain PhaeoP54_02236 PF00111 2Fe-2S iron-sulfur cluster binding domain PhaeoP54_02238 PF00027 Cyclic nucleotide-binding domain PhaeoP54_02238 PF13545 Crp-like helix-turn-helix domain PhaeoP54_02239 PF13180 PDZ domain PhaeoP54_02240 PF01145 SPFH domain / Band 7 family PhaeoP54_02241 PF01145 SPFH domain / Band 7 family PhaeoP54_02242 PF07992 Pyridine nucleotide-disulphide oxidoreductase PhaeoP54_02242 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain PhaeoP54_02244 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) PhaeoP54_02246 PF00043 Glutathione S-transferase, C-terminal domain PhaeoP54_02246 PF13417 Glutathione S-transferase, N-terminal domain PhaeoP54_02247 PF03315 Serine dehydratase beta chain PhaeoP54_02247 PF03313 Serine dehydratase alpha chain PhaeoP54_02252 PF00709 Adenylosuccinate synthetase PhaeoP54_02255 PF00106 short chain dehydrogenase PhaeoP54_02256 PF00561 alpha/beta hydrolase fold PhaeoP54_02256 PF00106 short chain dehydrogenase PhaeoP54_02262 PF12852 Cupin PhaeoP54_02262 PF12833 Helix-turn-helix domain PhaeoP54_02266 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PhaeoP54_02266 PF03466 LysR substrate binding domain PhaeoP54_02267 PF08803 Putative mono-oxygenase ydhR PhaeoP54_02270 PF02211 Nitrile hydratase beta subunit PhaeoP54_02271 PF02979 Nitrile hydratase, alpha chain PhaeoP54_02273 PF00117 Glutamine amidotransferase class-I PhaeoP54_02273 PF06418 CTP synthase N-terminus PhaeoP54_02274 PF00274 Fructose-bisphosphate aldolase class-I PhaeoP54_02275 PF00378 Enoyl-CoA hydratase/isomerase PhaeoP54_02276 PF00155 Aminotransferase class I and II PhaeoP54_02277 PF00266 Aminotransferase class-V PhaeoP54_02278 PF00664 ABC transporter transmembrane region PhaeoP54_02278 PF00005 ABC transporter PhaeoP54_02279 PF08669 Glycine cleavage T-protein C-terminal barrel domain PhaeoP54_02279 PF01571 Aminomethyltransferase folate-binding domain PhaeoP54_02281 PF09285 Elongation factor P, C-terminal PhaeoP54_02281 PF08207 Elongation factor P (EF-P) KOW-like domain PhaeoP54_02281 PF01132 Elongation factor P (EF-P) OB domain PhaeoP54_02283 PF07685 CobB/CobQ-like glutamine amidotransferase domain PhaeoP54_02285 PF02321 Outer membrane efflux protein PhaeoP54_02287 PF08274 PhnA Zinc-Ribbon PhaeoP54_02287 PF03831 PhnA domain PhaeoP54_02288 PF01258 Prokaryotic dksA/traR C4-type zinc finger PhaeoP54_02289 PF08085 Entericidin EcnA/B family PhaeoP54_02292 PF06421 GTP-binding protein LepA C-terminus PhaeoP54_02292 PF00679 Elongation factor G C-terminus PhaeoP54_02292 PF03144 Elongation factor Tu domain 2 PhaeoP54_02292 PF00009 Elongation factor Tu GTP binding domain PhaeoP54_02296 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PhaeoP54_02296 PF03466 LysR substrate binding domain PhaeoP54_02297 PF01451 Low molecular weight phosphotyrosine protein phosphatase PhaeoP54_02300 PF00830 Ribosomal L28 family PhaeoP54_02302 PF08482 ATP-dependent helicase C-terminal PhaeoP54_02302 PF00271 Helicase conserved C-terminal domain PhaeoP54_02302 PF04408 Helicase associated domain (HA2) PhaeoP54_02302 PF00270 DEAD/DEAH box helicase PhaeoP54_02304 PF01384 Phosphate transporter family PhaeoP54_02305 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain PhaeoP54_02305 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain PhaeoP54_02306 PF00202 Aminotransferase class-III PhaeoP54_02308 PF01061 ABC-2 type transporter PhaeoP54_02311 PF02798 Glutathione S-transferase, N-terminal domain PhaeoP54_02314 PF00005 ABC transporter PhaeoP54_02316 PF00793 DAHP synthetase I family PhaeoP54_02317 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain PhaeoP54_02317 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II PhaeoP54_02317 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III PhaeoP54_02317 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I PhaeoP54_02319 PF00919 Uncharacterized protein family UPF0004 PhaeoP54_02319 PF04055 Radical SAM superfamily PhaeoP54_02319 PF18693 TRAM domain PhaeoP54_02320 PF00912 Transglycosylase PhaeoP54_02325 PF09186 Domain of unknown function (DUF1949) PhaeoP54_02325 PF01205 Uncharacterized protein family UPF0029 PhaeoP54_02328 PF02594 Uncharacterised ACR, YggU family COG1872 PhaeoP54_02329 PF00881 Nitroreductase family PhaeoP54_02338 PF02938 GAD domain PhaeoP54_02338 PF00152 tRNA synthetases class II (D, K and N) PhaeoP54_02338 PF01336 OB-fold nucleic acid binding domain PhaeoP54_02340 PF04715 Anthranilate synthase component I, N terminal region PhaeoP54_02340 PF00425 chorismate binding enzyme PhaeoP54_02340 PF00117 Glutamine amidotransferase class-I PhaeoP54_02341 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain PhaeoP54_02341 PF02142 MGS-like domain PhaeoP54_02341 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain PhaeoP54_02342 PF03466 LysR substrate binding domain PhaeoP54_02342 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PhaeoP54_02343 PF00464 Serine hydroxymethyltransferase PhaeoP54_02344 PF00089 Trypsin PhaeoP54_02345 PF00873 AcrB/AcrD/AcrF family PhaeoP54_02347 PF01047 MarR family PhaeoP54_02348 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal PhaeoP54_02348 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III PhaeoP54_02349 PF03358 NADPH-dependent FMN reductase PhaeoP54_02351 PF00265 Thymidine kinase PhaeoP54_02352 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain PhaeoP54_02352 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain PhaeoP54_02353 PF01588 Putative tRNA binding domain PhaeoP54_02354 PF03807 NADP oxidoreductase coenzyme F420-dependent PhaeoP54_02354 PF14748 Pyrroline-5-carboxylate reductase dimerisation PhaeoP54_02357 PF01790 Prolipoprotein diacylglyceryl transferase PhaeoP54_02362 PF01037 Lrp/AsnC ligand binding domain PhaeoP54_02363 PF07992 Pyridine nucleotide-disulphide oxidoreductase PhaeoP54_02365 PF01747 ATP-sulfurylase PhaeoP54_02365 PF14306 PUA-like domain PhaeoP54_02367 PF02567 Phenazine biosynthesis-like protein PhaeoP54_02369 PF00011 Hsp20/alpha crystallin family PhaeoP54_02371 PF00731 AIR carboxylase PhaeoP54_02372 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain PhaeoP54_02372 PF02222 ATP-grasp domain PhaeoP54_02373 PF07969 Amidohydrolase family PhaeoP54_02375 PF00892 EamA-like transporter family PhaeoP54_02377 PF00118 TCP-1/cpn60 chaperonin family PhaeoP54_02378 PF00166 Chaperonin 10 Kd subunit PhaeoP54_02380 PF01368 DHH family PhaeoP54_02380 PF02833 DHHA2 domain PhaeoP54_02381 PF02203 Tar ligand binding domain homologue PhaeoP54_02381 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PhaeoP54_02381 PF00672 HAMP domain PhaeoP54_02383 PF01575 MaoC like domain PhaeoP54_02384 PF06574 FAD synthetase PhaeoP54_02384 PF01687 Riboflavin kinase PhaeoP54_02385 PF03692 Putative zinc- or iron-chelating domain PhaeoP54_02386 PF01212 Beta-eliminating lyase PhaeoP54_02389 PF12697 Alpha/beta hydrolase family PhaeoP54_02390 PF14572 Phosphoribosyl synthetase-associated domain PhaeoP54_02390 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase PhaeoP54_02392 PF09458 H-type lectin domain PhaeoP54_02393 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain PhaeoP54_02394 PF02874 ATP synthase alpha/beta family, beta-barrel domain PhaeoP54_02394 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain PhaeoP54_02395 PF00231 ATP synthase PhaeoP54_02396 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain PhaeoP54_02396 PF00306 ATP synthase alpha/beta chain, C terminal domain PhaeoP54_02396 PF02874 ATP synthase alpha/beta family, beta-barrel domain PhaeoP54_02397 PF00213 ATP synthase delta (OSCP) subunit PhaeoP54_02398 PF08241 Methyltransferase domain PhaeoP54_02399 PF16123 Hydroxyacylglutathione hydrolase C-terminus PhaeoP54_02399 PF00753 Metallo-beta-lactamase superfamily PhaeoP54_02400 PF07724 AAA domain (Cdc48 subfamily) PhaeoP54_02400 PF10431 C-terminal, D2-small domain, of ClpB protein PhaeoP54_02400 PF17871 AAA lid domain PhaeoP54_02400 PF02861 Clp amino terminal domain, pathogenicity island component PhaeoP54_02400 PF00004 ATPase family associated with various cellular activities (AAA) PhaeoP54_02405 PF04752 ChaC-like protein PhaeoP54_02408 PF02153 Prephenate dehydrogenase PhaeoP54_02409 PF00155 Aminotransferase class I and II PhaeoP54_02410 PF01037 Lrp/AsnC ligand binding domain PhaeoP54_02412 PF00163 Ribosomal protein S4/S9 N-terminal domain PhaeoP54_02412 PF01479 S4 domain PhaeoP54_02414 PF00034 Cytochrome c PhaeoP54_02416 PF01226 Formate/nitrite transporter PhaeoP54_02419 PF00115 Cytochrome C and Quinol oxidase polypeptide I PhaeoP54_02421 PF02082 Transcriptional regulator PhaeoP54_02423 PF00034 Cytochrome c PhaeoP54_02423 PF13442 Cytochrome C oxidase, cbb3-type, subunit III PhaeoP54_02423 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP PhaeoP54_02426 PF00115 Cytochrome C and Quinol oxidase polypeptide I PhaeoP54_02431 PF01047 MarR family PhaeoP54_02433 PF00199 Catalase PhaeoP54_02434 PF01047 MarR family PhaeoP54_02435 PF00291 Pyridoxal-phosphate dependent enzyme PhaeoP54_02436 PF03807 NADP oxidoreductase coenzyme F420-dependent PhaeoP54_02436 PF14748 Pyrroline-5-carboxylate reductase dimerisation PhaeoP54_02437 PF01212 Beta-eliminating lyase PhaeoP54_02438 PF01212 Beta-eliminating lyase PhaeoP54_02440 PF01212 Beta-eliminating lyase PhaeoP54_02441 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle PhaeoP54_02442 PF00528 Binding-protein-dependent transport system inner membrane component PhaeoP54_02443 PF00528 Binding-protein-dependent transport system inner membrane component PhaeoP54_02443 PF12911 N-terminal TM domain of oligopeptide transport permease C PhaeoP54_02444 PF00005 ABC transporter PhaeoP54_02444 PF08352 Oligopeptide/dipeptide transporter, C-terminal region PhaeoP54_02446 PF00005 ABC transporter PhaeoP54_02447 PF00528 Binding-protein-dependent transport system inner membrane component PhaeoP54_02448 PF00528 Binding-protein-dependent transport system inner membrane component PhaeoP54_02449 PF00497 Bacterial extracellular solute-binding proteins, family 3 PhaeoP54_02450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PhaeoP54_02450 PF03466 LysR substrate binding domain PhaeoP54_02452 PF01527 Transposase PhaeoP54_02453 PF00501 AMP-binding enzyme PhaeoP54_02453 PF13193 AMP-binding enzyme C-terminal domain PhaeoP54_02454 PF00970 Oxidoreductase FAD-binding domain PhaeoP54_02454 PF00111 2Fe-2S iron-sulfur cluster binding domain PhaeoP54_02454 PF00175 Oxidoreductase NAD-binding domain PhaeoP54_02455 PF01593 Flavin containing amine oxidoreductase PhaeoP54_02456 PF07992 Pyridine nucleotide-disulphide oxidoreductase PhaeoP54_02456 PF00724 NADH:flavin oxidoreductase / NADH oxidase family PhaeoP54_02457 PF01758 Sodium Bile acid symporter family PhaeoP54_02458 PF13305 Tetracyclin repressor-like, C-terminal domain PhaeoP54_02458 PF00440 Bacterial regulatory proteins, tetR family PhaeoP54_02460 PF06629 MltA-interacting protein MipA PhaeoP54_02466 PF01557 Fumarylacetoacetate (FAA) hydrolase family PhaeoP54_02473 PF00724 NADH:flavin oxidoreductase / NADH oxidase family PhaeoP54_02476 PF00384 Molybdopterin oxidoreductase PhaeoP54_02476 PF12838 4Fe-4S dicluster domain PhaeoP54_02476 PF04879 Molybdopterin oxidoreductase Fe4S4 domain PhaeoP54_02476 PF01568 Molydopterin dinucleotide binding domain PhaeoP54_02476 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region PhaeoP54_02477 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit PhaeoP54_02477 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region PhaeoP54_02477 PF10531 SLBB domain PhaeoP54_02478 PF03466 LysR substrate binding domain PhaeoP54_02478 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PhaeoP54_02480 PF00672 HAMP domain PhaeoP54_02480 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PhaeoP54_02486 PF01032 FecCD transport family PhaeoP54_02487 PF01032 FecCD transport family PhaeoP54_02488 PF00005 ABC transporter PhaeoP54_02490 PF01618 MotA/TolQ/ExbB proton channel family PhaeoP54_02495 PF00593 TonB dependent receptor PhaeoP54_02495 PF07715 TonB-dependent Receptor Plug Domain PhaeoP54_02496 PF00111 2Fe-2S iron-sulfur cluster binding domain PhaeoP54_02496 PF00970 Oxidoreductase FAD-binding domain PhaeoP54_02496 PF00175 Oxidoreductase NAD-binding domain PhaeoP54_02497 PF01047 MarR family PhaeoP54_02511 PF12344 Ultra-violet resistance protein B PhaeoP54_02511 PF00271 Helicase conserved C-terminal domain PhaeoP54_02511 PF04851 Type III restriction enzyme, res subunit PhaeoP54_02511 PF17757 UvrB interaction domain PhaeoP54_02511 PF02151 UvrB/uvrC motif PhaeoP54_02518 PF00295 Glycosyl hydrolases family 28 PhaeoP54_02520 PF01921 tRNA synthetases class I (K) PhaeoP54_02523 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family PhaeoP54_02525 PF01467 Cytidylyltransferase-like PhaeoP54_02526 PF00005 ABC transporter PhaeoP54_02526 PF12848 ABC transporter PhaeoP54_02532 PF00085 Thioredoxin PhaeoP54_02534 PF03734 L,D-transpeptidase catalytic domain PhaeoP54_02534 PF17969 L,D-transpeptidase C-terminal domain PhaeoP54_02535 PF00313 'Cold-shock' DNA-binding domain PhaeoP54_02536 PF13472 GDSL-like Lipase/Acylhydrolase family PhaeoP54_02537 PF00005 ABC transporter PhaeoP54_02539 PF02082 Transcriptional regulator PhaeoP54_02541 PF10011 Predicted membrane protein (DUF2254) PhaeoP54_02542 PF00749 tRNA synthetases class I (E and Q), catalytic domain PhaeoP54_02543 PF07694 5TMR of 5TMR-LYT PhaeoP54_02543 PF00990 Diguanylate cyclase, GGDEF domain PhaeoP54_02544 PF00795 Carbon-nitrogen hydrolase PhaeoP54_02544 PF02540 NAD synthase PhaeoP54_02546 PF08502 LeuA allosteric (dimerisation) domain PhaeoP54_02546 PF00682 HMGL-like PhaeoP54_02547 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ PhaeoP54_02548 PF04371 Porphyromonas-type peptidyl-arginine deiminase PhaeoP54_02550 PF04085 rod shape-determining protein MreC PhaeoP54_02552 PF00905 Penicillin binding protein transpeptidase domain PhaeoP54_02552 PF03717 Penicillin-binding Protein dimerisation domain PhaeoP54_02553 PF01098 Cell cycle protein PhaeoP54_02554 PF03466 LysR substrate binding domain PhaeoP54_02554 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PhaeoP54_02556 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain PhaeoP54_02557 PF04820 Tryptophan halogenase PhaeoP54_02558 PF01432 Peptidase family M3 PhaeoP54_02559 PF00528 Binding-protein-dependent transport system inner membrane component PhaeoP54_02560 PF00497 Bacterial extracellular solute-binding proteins, family 3 PhaeoP54_02561 PF00899 ThiF family PhaeoP54_02562 PF00692 dUTPase PhaeoP54_02563 PF02441 Flavoprotein PhaeoP54_02563 PF04127 DNA / pantothenate metabolism flavoprotein PhaeoP54_02565 PF00140 Sigma-70 factor, region 1.2 PhaeoP54_02565 PF04542 Sigma-70 region 2 PhaeoP54_02565 PF04545 Sigma-70, region 4 PhaeoP54_02566 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase PhaeoP54_02567 PF13456 Reverse transcriptase-like PhaeoP54_02567 PF00300 Histidine phosphatase superfamily (branch 1) PhaeoP54_02569 PF01078 Magnesium chelatase, subunit ChlI PhaeoP54_02569 PF13335 Magnesium chelatase, subunit ChlI C-terminal PhaeoP54_02570 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain PhaeoP54_02570 PF02951 Prokaryotic glutathione synthetase, N-terminal domain PhaeoP54_02571 PF02021 Uncharacterised protein family UPF0102 PhaeoP54_02572 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases PhaeoP54_02574 PF01966 HD domain PhaeoP54_02574 PF08335 GlnD PII-uridylyltransferase PhaeoP54_02575 PF03023 Lipid II flippase MurJ PhaeoP54_02577 PF00579 tRNA synthetases class I (W and Y) PhaeoP54_02578 PF00313 'Cold-shock' DNA-binding domain PhaeoP54_02579 PF00440 Bacterial regulatory proteins, tetR family PhaeoP54_02579 PF13977 BetI-type transcriptional repressor, C-terminal PhaeoP54_02581 PF03061 Thioesterase superfamily PhaeoP54_02582 PF00378 Enoyl-CoA hydratase/isomerase PhaeoP54_02583 PF01575 MaoC like domain PhaeoP54_02583 PF00171 Aldehyde dehydrogenase family PhaeoP54_02584 PF07848 PaaX-like protein PhaeoP54_02584 PF08223 PaaX-like protein C-terminal domain PhaeoP54_02587 PF00005 ABC transporter PhaeoP54_02589 PF01032 FecCD transport family PhaeoP54_02590 PF01042 Endoribonuclease L-PSP PhaeoP54_02595 PF07969 Amidohydrolase family PhaeoP54_02602 PF05532 CsbD-like PhaeoP54_02607 PF13091 PLD-like domain PhaeoP54_02608 PF07568 Histidine kinase PhaeoP54_02608 PF12282 Signal transduction histidine kinase PhaeoP54_02608 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PhaeoP54_02609 PF04542 Sigma-70 region 2 PhaeoP54_02609 PF08281 Sigma-70, region 4 PhaeoP54_02611 PF00072 Response regulator receiver domain PhaeoP54_02612 PF00210 Ferritin-like domain PhaeoP54_02618 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component PhaeoP54_02620 PF03951 Glutamine synthetase, beta-Grasp domain PhaeoP54_02620 PF00120 Glutamine synthetase, catalytic domain PhaeoP54_02621 PF00171 Aldehyde dehydrogenase family PhaeoP54_02622 PF00465 Iron-containing alcohol dehydrogenase PhaeoP54_02623 PF01966 HD domain PhaeoP54_02624 PF02668 Taurine catabolism dioxygenase TauD, TfdA family PhaeoP54_02624 PF06155 Protein of unknown function (DUF971) PhaeoP54_02625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PhaeoP54_02625 PF03466 LysR substrate binding domain PhaeoP54_02627 PF00072 Response regulator receiver domain PhaeoP54_02627 PF00486 Transcriptional regulatory protein, C terminal PhaeoP54_02628 PF16736 Single Cache-like PhaeoP54_02628 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PhaeoP54_02628 PF00989 PAS fold PhaeoP54_02628 PF00512 His Kinase A (phospho-acceptor) domain PhaeoP54_02632 PF00072 Response regulator receiver domain PhaeoP54_02632 PF00196 Bacterial regulatory proteins, luxR family PhaeoP54_02635 PF17912 MalK OB fold domain PhaeoP54_02635 PF00005 ABC transporter PhaeoP54_02635 PF03459 TOBE domain PhaeoP54_02638 PF00528 Binding-protein-dependent transport system inner membrane component PhaeoP54_02643 PF00356 Bacterial regulatory proteins, lacI family PhaeoP54_02646 PF08267 Cobalamin-independent synthase, N-terminal domain PhaeoP54_02646 PF01717 Cobalamin-independent synthase, Catalytic domain PhaeoP54_02647 PF00561 alpha/beta hydrolase fold PhaeoP54_02649 PF00672 HAMP domain PhaeoP54_02649 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PhaeoP54_02651 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain PhaeoP54_02651 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain PhaeoP54_02652 PF12973 ChrR Cupin-like domain PhaeoP54_02653 PF04545 Sigma-70, region 4 PhaeoP54_02653 PF04542 Sigma-70 region 2 PhaeoP54_02660 PF00106 short chain dehydrogenase PhaeoP54_02662 PF00989 PAS fold PhaeoP54_02662 PF00512 His Kinase A (phospho-acceptor) domain PhaeoP54_02662 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PhaeoP54_02663 PF00072 Response regulator receiver domain PhaeoP54_02663 PF00158 Sigma-54 interaction domain PhaeoP54_02663 PF02954 Bacterial regulatory protein, Fis family PhaeoP54_02665 PF00034 Cytochrome c PhaeoP54_02667 PF13247 4Fe-4S dicluster domain PhaeoP54_02668 PF04879 Molybdopterin oxidoreductase Fe4S4 domain PhaeoP54_02668 PF00384 Molybdopterin oxidoreductase PhaeoP54_02668 PF01568 Molydopterin dinucleotide binding domain PhaeoP54_02675 PF10609 NUBPL iron-transfer P-loop NTPase PhaeoP54_02678 PF12849 PBP superfamily domain PhaeoP54_02679 PF00005 ABC transporter PhaeoP54_02679 PF08402 TOBE domain PhaeoP54_02680 PF00528 Binding-protein-dependent transport system inner membrane component PhaeoP54_02681 PF02445 Quinolinate synthetase A protein PhaeoP54_02682 PF02910 Fumarate reductase flavoprotein C-term PhaeoP54_02682 PF00890 FAD binding domain PhaeoP54_02683 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain PhaeoP54_02683 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain PhaeoP54_02687 PF00535 Glycosyl transferase family 2 PhaeoP54_02689 PF02515 CoA-transferase family III PhaeoP54_02690 PF01979 Amidohydrolase family PhaeoP54_02691 PF01380 SIS domain PhaeoP54_02694 PF13580 SIS domain PhaeoP54_02697 PF00528 Binding-protein-dependent transport system inner membrane component PhaeoP54_02698 PF02894 Oxidoreductase family, C-terminal alpha/beta domain PhaeoP54_02698 PF01408 Oxidoreductase family, NAD-binding Rossmann fold PhaeoP54_02699 PF08402 TOBE domain PhaeoP54_02699 PF00005 ABC transporter PhaeoP54_02700 PF00342 Phosphoglucose isomerase PhaeoP54_02701 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain PhaeoP54_02701 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain PhaeoP54_02702 PF00920 Dehydratase family PhaeoP54_02703 PF01081 KDPG and KHG aldolase PhaeoP54_02705 PF00294 pfkB family carbohydrate kinase PhaeoP54_02707 PF00005 ABC transporter PhaeoP54_02708 PF02653 Branched-chain amino acid transport system / permease component PhaeoP54_02709 PF13407 Periplasmic binding protein domain PhaeoP54_02711 PF00583 Acetyltransferase (GNAT) family PhaeoP54_02713 PF14579 Helix-hairpin-helix motif PhaeoP54_02713 PF02811 PHP domain PhaeoP54_02713 PF17657 Bacterial DNA polymerase III alpha subunit finger domain PhaeoP54_02713 PF07733 Bacterial DNA polymerase III alpha NTPase domain PhaeoP54_02714 PF01799 [2Fe-2S] binding domain PhaeoP54_02714 PF00111 2Fe-2S iron-sulfur cluster binding domain PhaeoP54_02715 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain PhaeoP54_02715 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase PhaeoP54_02721 PF02608 ABC transporter substrate-binding protein PnrA-like PhaeoP54_02722 PF01066 CDP-alcohol phosphatidyltransferase PhaeoP54_02724 PF01266 FAD dependent oxidoreductase PhaeoP54_02726 PF02894 Oxidoreductase family, C-terminal alpha/beta domain PhaeoP54_02726 PF01408 Oxidoreductase family, NAD-binding Rossmann fold PhaeoP54_02727 PF08669 Glycine cleavage T-protein C-terminal barrel domain PhaeoP54_02727 PF01571 Aminomethyltransferase folate-binding domain PhaeoP54_02727 PF16350 FAD dependent oxidoreductase central domain PhaeoP54_02727 PF01266 FAD dependent oxidoreductase PhaeoP54_02728 PF01565 FAD binding domain PhaeoP54_02728 PF02913 FAD linked oxidases, C-terminal domain PhaeoP54_02730 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain PhaeoP54_02730 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain PhaeoP54_02732 PF13175 AAA ATPase domain PhaeoP54_02736 PF00005 ABC transporter PhaeoP54_02737 PF00528 Binding-protein-dependent transport system inner membrane component PhaeoP54_02738 PF03971 Monomeric isocitrate dehydrogenase PhaeoP54_02739 PF07722 Peptidase C26 PhaeoP54_02744 PF00005 ABC transporter PhaeoP54_02744 PF08352 Oligopeptide/dipeptide transporter, C-terminal region PhaeoP54_02745 PF08352 Oligopeptide/dipeptide transporter, C-terminal region PhaeoP54_02745 PF00005 ABC transporter PhaeoP54_02747 PF00528 Binding-protein-dependent transport system inner membrane component PhaeoP54_02750 PF00557 Metallopeptidase family M24 PhaeoP54_02750 PF01321 Creatinase/Prolidase N-terminal domain PhaeoP54_02751 PF00486 Transcriptional regulatory protein, C terminal PhaeoP54_02751 PF00072 Response regulator receiver domain PhaeoP54_02752 PF00072 Response regulator receiver domain PhaeoP54_02752 PF13426 PAS domain PhaeoP54_02752 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PhaeoP54_02753 PF00440 Bacterial regulatory proteins, tetR family PhaeoP54_02754 PF08240 Alcohol dehydrogenase GroES-like domain PhaeoP54_02754 PF00107 Zinc-binding dehydrogenase PhaeoP54_02755 PF01361 Tautomerase enzyme PhaeoP54_02757 PF00043 Glutathione S-transferase, C-terminal domain PhaeoP54_02757 PF02798 Glutathione S-transferase, N-terminal domain PhaeoP54_02758 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PhaeoP54_02758 PF03466 LysR substrate binding domain PhaeoP54_02766 PF00512 His Kinase A (phospho-acceptor) domain PhaeoP54_02766 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PhaeoP54_02766 PF01590 GAF domain PhaeoP54_02766 PF00360 Phytochrome region PhaeoP54_02766 PF08446 PAS fold PhaeoP54_02767 PF00111 2Fe-2S iron-sulfur cluster binding domain PhaeoP54_02768 PF03746 LamB/YcsF family PhaeoP54_02769 PF02626 Carboxyltransferase domain, subdomain A and B PhaeoP54_02771 PF13230 Glutamine amidotransferases class-II PhaeoP54_02773 PF00202 Aminotransferase class-III PhaeoP54_02775 PF00202 Aminotransferase class-III PhaeoP54_02779 PF00392 Bacterial regulatory proteins, gntR family PhaeoP54_02779 PF00155 Aminotransferase class I and II PhaeoP54_02780 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain PhaeoP54_02780 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain PhaeoP54_02780 PF00205 Thiamine pyrophosphate enzyme, central domain PhaeoP54_02782 PF00871 Acetokinase family PhaeoP54_02783 PF01515 Phosphate acetyl/butaryl transferase PhaeoP54_02784 PF00285 Citrate synthase, C-terminal domain PhaeoP54_02785 PF01568 Molydopterin dinucleotide binding domain PhaeoP54_02785 PF04879 Molybdopterin oxidoreductase Fe4S4 domain PhaeoP54_02785 PF00384 Molybdopterin oxidoreductase PhaeoP54_02786 PF13247 4Fe-4S dicluster domain PhaeoP54_02786 PF12800 4Fe-4S binding domain PhaeoP54_02787 PF04976 DMSO reductase anchor subunit (DmsC) PhaeoP54_02788 PF02627 Carboxymuconolactone decarboxylase family PhaeoP54_02789 PF04542 Sigma-70 region 2 PhaeoP54_02789 PF08281 Sigma-70, region 4 PhaeoP54_02790 PF00701 Dihydrodipicolinate synthetase family PhaeoP54_02791 PF14718 Soluble lytic murein transglycosylase L domain PhaeoP54_02791 PF01464 Transglycosylase SLT domain PhaeoP54_02793 PF05430 S-adenosyl-L-methionine-dependent methyltransferase PhaeoP54_02793 PF01266 FAD dependent oxidoreductase PhaeoP54_02797 PF04972 BON domain PhaeoP54_02797 PF00691 OmpA family PhaeoP54_02800 PF02805 Metal binding domain of Ada PhaeoP54_02800 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain PhaeoP54_02800 PF12833 Helix-turn-helix domain PhaeoP54_02800 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain PhaeoP54_02801 PF00730 HhH-GPD superfamily base excision DNA repair protein PhaeoP54_02801 PF10576 Iron-sulfur binding domain of endonuclease III PhaeoP54_02801 PF00633 Helix-hairpin-helix motif PhaeoP54_02802 PF00294 pfkB family carbohydrate kinase PhaeoP54_02803 PF01047 MarR family PhaeoP54_02804 PF00892 EamA-like transporter family PhaeoP54_02806 PF00293 NUDIX domain PhaeoP54_02807 PF07992 Pyridine nucleotide-disulphide oxidoreductase PhaeoP54_02807 PF00724 NADH:flavin oxidoreductase / NADH oxidase family PhaeoP54_02808 PF01965 DJ-1/PfpI family PhaeoP54_02810 PF03992 Antibiotic biosynthesis monooxygenase PhaeoP54_02813 PF03466 LysR substrate binding domain PhaeoP54_02813 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PhaeoP54_02814 PF00691 OmpA family PhaeoP54_02817 PF18146 Damage-inducible protein CinA KH domain PhaeoP54_02817 PF02464 Competence-damaged protein PhaeoP54_02817 PF00994 Probable molybdopterin binding domain PhaeoP54_02818 PF03749 Sugar fermentation stimulation protein RE domain PhaeoP54_02818 PF17746 SfsA N-terminal OB domain PhaeoP54_02819 PF05552 Conserved TM helix PhaeoP54_02819 PF00924 Mechanosensitive ion channel PhaeoP54_02820 PF00557 Metallopeptidase family M24 PhaeoP54_02821 PF13419 Haloacid dehalogenase-like hydrolase PhaeoP54_02823 PF07992 Pyridine nucleotide-disulphide oxidoreductase PhaeoP54_02823 PF14759 Reductase C-terminal PhaeoP54_02824 PF08534 Redoxin PhaeoP54_02824 PF00462 Glutaredoxin PhaeoP54_02825 PF01329 Pterin 4 alpha carbinolamine dehydratase PhaeoP54_02829 PF00529 HlyD membrane-fusion protein of T1SS PhaeoP54_02829 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion PhaeoP54_02830 PF00664 ABC transporter transmembrane region PhaeoP54_02830 PF00005 ABC transporter PhaeoP54_02834 PF00912 Transglycosylase PhaeoP54_02834 PF14814 Bifunctional transglycosylase second domain PhaeoP54_02834 PF00905 Penicillin binding protein transpeptidase domain PhaeoP54_02834 PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal PhaeoP54_02835 PF00543 Nitrogen regulatory protein P-II PhaeoP54_02836 PF00909 Ammonium Transporter Family PhaeoP54_02837 PF00155 Aminotransferase class I and II PhaeoP54_02838 PF00581 Rhodanese-like domain PhaeoP54_02840 PF01668 SmpB protein PhaeoP54_02842 PF01381 Helix-turn-helix PhaeoP54_02842 PF07883 Cupin domain PhaeoP54_02843 PF03594 Benzoate membrane transport protein PhaeoP54_02844 PF00920 Dehydratase family PhaeoP54_02848 PF07509 Protein of unknown function (DUF1523) PhaeoP54_02855 PF08241 Methyltransferase domain PhaeoP54_02856 PF01066 CDP-alcohol phosphatidyltransferase PhaeoP54_02857 PF00557 Metallopeptidase family M24 PhaeoP54_02857 PF01321 Creatinase/Prolidase N-terminal domain PhaeoP54_02859 PF00171 Aldehyde dehydrogenase family PhaeoP54_02861 PF00011 Hsp20/alpha crystallin family PhaeoP54_02862 PF00089 Trypsin PhaeoP54_02863 PF00089 Trypsin PhaeoP54_02864 PF02754 Cysteine-rich domain PhaeoP54_02864 PF13183 4Fe-4S dicluster domain PhaeoP54_02865 PF01565 FAD binding domain PhaeoP54_02866 PF02913 FAD linked oxidases, C-terminal domain PhaeoP54_02866 PF01565 FAD binding domain PhaeoP54_02869 PF02590 Predicted SPOUT methyltransferase PhaeoP54_02871 PF12794 Mechanosensitive ion channel inner membrane domain 1 PhaeoP54_02871 PF00924 Mechanosensitive ion channel PhaeoP54_02871 PF12795 Mechanosensitive ion channel porin domain PhaeoP54_02872 PF00330 Aconitase family (aconitate hydratase) PhaeoP54_02873 PF00694 Aconitase C-terminal domain PhaeoP54_02877 PF00180 Isocitrate/isopropylmalate dehydrogenase PhaeoP54_02878 PF00892 EamA-like transporter family PhaeoP54_02881 PF01634 ATP phosphoribosyltransferase PhaeoP54_02882 PF13393 Histidyl-tRNA synthetase PhaeoP54_02883 PF13393 Histidyl-tRNA synthetase PhaeoP54_02883 PF03129 Anticodon binding domain PhaeoP54_02885 PF00403 Heavy-metal-associated domain PhaeoP54_02886 PF02515 CoA-transferase family III PhaeoP54_02888 PF01208 Uroporphyrinogen decarboxylase (URO-D) PhaeoP54_02889 PF03900 Porphobilinogen deaminase, C-terminal domain PhaeoP54_02889 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain PhaeoP54_02890 PF01183 Glycosyl hydrolases family 25 PhaeoP54_02891 PF01218 Coproporphyrinogen III oxidase PhaeoP54_02893 PF08468 Methyltransferase small domain N-terminal PhaeoP54_02893 PF05175 Methyltransferase small domain PhaeoP54_02894 PF02617 ATP-dependent Clp protease adaptor protein ClpS PhaeoP54_02897 PF07943 Penicillin-binding protein 5, C-terminal domain PhaeoP54_02897 PF00768 D-alanyl-D-alanine carboxypeptidase PhaeoP54_02898 PF03597 Cytochrome oxidase maturation protein cbb3-type PhaeoP54_02899 PF00403 Heavy-metal-associated domain PhaeoP54_02900 PF05751 FixH PhaeoP54_02901 PF12801 4Fe-4S binding domain PhaeoP54_02901 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase PhaeoP54_02901 PF13746 4Fe-4S dicluster domain PhaeoP54_02903 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP PhaeoP54_02903 PF13442 Cytochrome C oxidase, cbb3-type, subunit III PhaeoP54_02906 PF00115 Cytochrome C and Quinol oxidase polypeptide I PhaeoP54_02908 PF13545 Crp-like helix-turn-helix domain PhaeoP54_02908 PF00027 Cyclic nucleotide-binding domain PhaeoP54_02909 PF00005 ABC transporter PhaeoP54_02909 PF08352 Oligopeptide/dipeptide transporter, C-terminal region PhaeoP54_02910 PF12911 N-terminal TM domain of oligopeptide transport permease C PhaeoP54_02910 PF00528 Binding-protein-dependent transport system inner membrane component PhaeoP54_02911 PF00528 Binding-protein-dependent transport system inner membrane component PhaeoP54_02912 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle PhaeoP54_02914 PF00800 Prephenate dehydratase PhaeoP54_02914 PF01817 Chorismate mutase type II PhaeoP54_02916 PF00293 NUDIX domain PhaeoP54_02916 PF09297 NADH pyrophosphatase zinc ribbon domain PhaeoP54_02916 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain PhaeoP54_02917 PF02872 5'-nucleotidase, C-terminal domain PhaeoP54_02917 PF00149 Calcineurin-like phosphoesterase PhaeoP54_02922 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding PhaeoP54_02922 PF12169 DNA polymerase III subunits gamma and tau domain III PhaeoP54_02922 PF12170 DNA polymerase III tau subunit V interacting with alpha PhaeoP54_02924 PF02575 YbaB/EbfC DNA-binding family PhaeoP54_02925 PF13662 Toprim domain PhaeoP54_02925 PF02132 RecR protein PhaeoP54_02928 PF00445 Ribonuclease T2 family PhaeoP54_02930 PF02801 Beta-ketoacyl synthase, C-terminal domain PhaeoP54_02930 PF00109 Beta-ketoacyl synthase, N-terminal domain PhaeoP54_02930 PF08240 Alcohol dehydrogenase GroES-like domain PhaeoP54_02930 PF00698 Acyl transferase domain PhaeoP54_02930 PF16197 Ketoacyl-synthetase C-terminal extension PhaeoP54_02930 PF00550 Phosphopantetheine attachment site PhaeoP54_02930 PF08659 KR domain PhaeoP54_02930 PF14765 Polyketide synthase dehydratase PhaeoP54_02932 PF01165 Ribosomal protein S21 PhaeoP54_02933 PF03976 Polyphosphate kinase 2 (PPK2) PhaeoP54_02934 PF05199 GMC oxidoreductase PhaeoP54_02934 PF00732 GMC oxidoreductase PhaeoP54_02935 PF01037 Lrp/AsnC ligand binding domain PhaeoP54_02936 PF01262 Alanine dehydrogenase/PNT, C-terminal domain PhaeoP54_02936 PF05222 Alanine dehydrogenase/PNT, N-terminal domain PhaeoP54_02937 PF00440 Bacterial regulatory proteins, tetR family PhaeoP54_02937 PF16925 Tetracyclin repressor-like, C-terminal domain PhaeoP54_02938 PF16884 N-terminal domain of oxidoreductase PhaeoP54_02938 PF00107 Zinc-binding dehydrogenase PhaeoP54_02940 PF01063 Amino-transferase class IV PhaeoP54_02941 PF13378 Enolase C-terminal domain-like PhaeoP54_02941 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain PhaeoP54_02943 PF03328 HpcH/HpaI aldolase/citrate lyase family PhaeoP54_02945 PF01037 Lrp/AsnC ligand binding domain PhaeoP54_02948 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit PhaeoP54_02956 PF12833 Helix-turn-helix domain PhaeoP54_02956 PF02311 AraC-like ligand binding domain PhaeoP54_02957 PF03466 LysR substrate binding domain PhaeoP54_02957 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PhaeoP54_02960 PF00120 Glutamine synthetase, catalytic domain PhaeoP54_02960 PF03951 Glutamine synthetase, beta-Grasp domain PhaeoP54_02962 PF00005 ABC transporter PhaeoP54_02962 PF12399 Branched-chain amino acid ATP-binding cassette transporter PhaeoP54_02963 PF13458 Periplasmic binding protein PhaeoP54_02964 PF00005 ABC transporter PhaeoP54_02965 PF02653 Branched-chain amino acid transport system / permease component PhaeoP54_02967 PF00857 Isochorismatase family PhaeoP54_02970 PF18030 RimK PreATP-grasp domain PhaeoP54_02970 PF08443 RimK-like ATP-grasp domain PhaeoP54_02971 PF18030 RimK PreATP-grasp domain PhaeoP54_02971 PF08443 RimK-like ATP-grasp domain PhaeoP54_02972 PF01544 CorA-like Mg2+ transporter protein PhaeoP54_02973 PF07690 Major Facilitator Superfamily PhaeoP54_02975 PF00512 His Kinase A (phospho-acceptor) domain PhaeoP54_02975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PhaeoP54_02976 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain PhaeoP54_02976 PF07992 Pyridine nucleotide-disulphide oxidoreductase PhaeoP54_02978 PF00468 Ribosomal protein L34 PhaeoP54_02979 PF00825 Ribonuclease P PhaeoP54_02980 PF01809 Putative membrane protein insertion efficiency factor PhaeoP54_02982 PF01171 PP-loop family PhaeoP54_02983 PF00563 EAL domain PhaeoP54_02983 PF03707 Bacterial signalling protein N terminal repeat PhaeoP54_02983 PF00990 Diguanylate cyclase, GGDEF domain PhaeoP54_02984 PF14849 YidC periplasmic domain PhaeoP54_02984 PF02096 60Kd inner membrane protein PhaeoP54_02986 PF01926 50S ribosome-binding GTPase PhaeoP54_02988 PF00696 Amino acid kinase family PhaeoP54_02992 PF00005 ABC transporter PhaeoP54_02993 PF00528 Binding-protein-dependent transport system inner membrane component PhaeoP54_02994 PF00528 Binding-protein-dependent transport system inner membrane component PhaeoP54_02995 PF00497 Bacterial extracellular solute-binding proteins, family 3 PhaeoP54_02997 PF13419 Haloacid dehalogenase-like hydrolase PhaeoP54_02998 PF01479 S4 domain PhaeoP54_02998 PF00849 RNA pseudouridylate synthase PhaeoP54_02999 PF02537 CrcB-like protein, Camphor Resistance (CrcB) PhaeoP54_03000 PF00004 ATPase family associated with various cellular activities (AAA) PhaeoP54_03000 PF16193 AAA C-terminal domain PhaeoP54_03000 PF12002 MgsA AAA+ ATPase C terminal PhaeoP54_03001 PF13180 PDZ domain PhaeoP54_03002 PF01196 Ribosomal protein L17 PhaeoP54_03003 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain PhaeoP54_03003 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain PhaeoP54_03003 PF01000 RNA polymerase Rpb3/RpoA insert domain PhaeoP54_03004 PF00411 Ribosomal protein S11 PhaeoP54_03005 PF00416 Ribosomal protein S13/S18 PhaeoP54_03006 PF05191 Adenylate kinase, active site lid PhaeoP54_03007 PF00344 SecY translocase PhaeoP54_03008 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A PhaeoP54_03011 PF00392 Bacterial regulatory proteins, gntR family PhaeoP54_03011 PF00155 Aminotransferase class I and II PhaeoP54_03013 PF00327 Ribosomal protein L30p/L7e PhaeoP54_03014 PF03719 Ribosomal protein S5, C-terminal domain PhaeoP54_03014 PF00333 Ribosomal protein S5, N-terminal domain PhaeoP54_03015 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast PhaeoP54_03016 PF00347 Ribosomal protein L6 PhaeoP54_03017 PF00410 Ribosomal protein S8 PhaeoP54_03018 PF00253 Ribosomal protein S14p/S29e PhaeoP54_03019 PF00281 Ribosomal protein L5 PhaeoP54_03019 PF00673 ribosomal L5P family C-terminus PhaeoP54_03020 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 PhaeoP54_03020 PF00467 KOW motif PhaeoP54_03021 PF00238 Ribosomal protein L14p/L23e PhaeoP54_03022 PF00366 Ribosomal protein S17 PhaeoP54_03023 PF00831 Ribosomal L29 protein PhaeoP54_03028 PF00252 Ribosomal protein L16p/L10e PhaeoP54_03029 PF00189 Ribosomal protein S3, C-terminal domain PhaeoP54_03029 PF07650 KH domain PhaeoP54_03030 PF00237 Ribosomal protein L22p/L17e PhaeoP54_03031 PF00203 Ribosomal protein S19 PhaeoP54_03032 PF00181 Ribosomal Proteins L2, RNA binding domain PhaeoP54_03032 PF03947 Ribosomal Proteins L2, C-terminal domain PhaeoP54_03034 PF00276 Ribosomal protein L23 PhaeoP54_03035 PF00573 Ribosomal protein L4/L1 family PhaeoP54_03036 PF00297 Ribosomal protein L3 PhaeoP54_03037 PF00338 Ribosomal protein S10p/S20e PhaeoP54_03039 PF03143 Elongation factor Tu C-terminal domain PhaeoP54_03039 PF00009 Elongation factor Tu GTP binding domain PhaeoP54_03039 PF03144 Elongation factor Tu domain 2 PhaeoP54_03040 PF03144 Elongation factor Tu domain 2 PhaeoP54_03040 PF00009 Elongation factor Tu GTP binding domain PhaeoP54_03040 PF03764 Elongation factor G, domain IV PhaeoP54_03040 PF14492 Elongation Factor G, domain II PhaeoP54_03040 PF00679 Elongation factor G C-terminus PhaeoP54_03041 PF00177 Ribosomal protein S7p/S5e PhaeoP54_03042 PF00164 Ribosomal protein S12/S23 PhaeoP54_03046 PF03466 LysR substrate binding domain PhaeoP54_03046 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PhaeoP54_03048 PF00857 Isochorismatase family PhaeoP54_03049 PF13409 Glutathione S-transferase, N-terminal domain PhaeoP54_03052 PF05000 RNA polymerase Rpb1, domain 4 PhaeoP54_03052 PF04983 RNA polymerase Rpb1, domain 3 PhaeoP54_03052 PF00623 RNA polymerase Rpb1, domain 2 PhaeoP54_03052 PF04997 RNA polymerase Rpb1, domain 1 PhaeoP54_03052 PF04998 RNA polymerase Rpb1, domain 5 PhaeoP54_03053 PF04561 RNA polymerase Rpb2, domain 2 PhaeoP54_03053 PF04560 RNA polymerase Rpb2, domain 7 PhaeoP54_03053 PF00562 RNA polymerase Rpb2, domain 6 PhaeoP54_03053 PF04563 RNA polymerase beta subunit PhaeoP54_03053 PF04565 RNA polymerase Rpb2, domain 3 PhaeoP54_03053 PF10385 RNA polymerase beta subunit external 1 domain PhaeoP54_03054 PF16320 Ribosomal protein L7/L12 dimerisation domain PhaeoP54_03054 PF00542 Ribosomal protein L7/L12 C-terminal domain PhaeoP54_03055 PF00466 Ribosomal protein L10 PhaeoP54_03056 PF00687 Ribosomal protein L1p/L10e family PhaeoP54_03057 PF03946 Ribosomal protein L11, N-terminal domain PhaeoP54_03057 PF00298 Ribosomal protein L11, RNA binding domain PhaeoP54_03059 PF00467 KOW motif PhaeoP54_03059 PF02357 Transcription termination factor nusG PhaeoP54_03064 PF00009 Elongation factor Tu GTP binding domain PhaeoP54_03064 PF03144 Elongation factor Tu domain 2 PhaeoP54_03064 PF03143 Elongation factor Tu C-terminal domain PhaeoP54_03066 PF00521 DNA gyrase/topoisomerase IV, subunit A PhaeoP54_03066 PF03989 DNA gyrase C-terminal domain, beta-propeller PhaeoP54_03068 PF00106 short chain dehydrogenase PhaeoP54_03070 PF01923 Cobalamin adenosyltransferase PhaeoP54_03071 PF01012 Electron transfer flavoprotein domain PhaeoP54_03072 PF00766 Electron transfer flavoprotein FAD-binding domain PhaeoP54_03072 PF01012 Electron transfer flavoprotein domain PhaeoP54_03074 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain PhaeoP54_03074 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain PhaeoP54_03076 PF00381 PTS HPr component phosphorylation site PhaeoP54_03078 PF03668 P-loop ATPase protein family PhaeoP54_03080 PF00512 His Kinase A (phospho-acceptor) domain PhaeoP54_03080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PhaeoP54_03080 PF13755 Sensor N-terminal transmembrane domain PhaeoP54_03080 PF13756 Stimulus-sensing domain PhaeoP54_03080 PF00672 HAMP domain PhaeoP54_03081 PF00486 Transcriptional regulatory protein, C terminal PhaeoP54_03081 PF00072 Response regulator receiver domain PhaeoP54_03082 PF01293 Phosphoenolpyruvate carboxykinase PhaeoP54_03083 PF16916 Dimerisation domain of Zinc Transporter PhaeoP54_03083 PF01545 Cation efflux family PhaeoP54_03085 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PhaeoP54_03085 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PhaeoP54_03085 PF02770 Acyl-CoA dehydrogenase, middle domain PhaeoP54_03087 PF11967 Recombination protein O N terminal PhaeoP54_03087 PF02565 Recombination protein O C terminal PhaeoP54_03089 PF07650 KH domain PhaeoP54_03089 PF01926 50S ribosome-binding GTPase PhaeoP54_03090 PF00035 Double-stranded RNA binding motif PhaeoP54_03090 PF14622 Ribonuclease-III-like PhaeoP54_03091 PF10502 Signal peptidase, peptidase S26 PhaeoP54_03092 PF01648 4'-phosphopantetheinyl transferase superfamily PhaeoP54_03093 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ PhaeoP54_03095 PF13291 ACT domain PhaeoP54_03095 PF04607 Region found in RelA / SpoT proteins PhaeoP54_03095 PF02824 TGS domain PhaeoP54_03096 PF01192 RNA polymerase Rpb6 PhaeoP54_03097 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) PhaeoP54_03099 PF02401 LytB protein PhaeoP54_03103 PF00075 RNase H PhaeoP54_03104 PF03458 UPF0126 domain PhaeoP54_03106 PF02911 Formyl transferase, C-terminal domain PhaeoP54_03106 PF00551 Formyl transferase PhaeoP54_03107 PF01327 Polypeptide deformylase PhaeoP54_03108 PF01327 Polypeptide deformylase PhaeoP54_03109 PF01327 Polypeptide deformylase PhaeoP54_03110 PF00155 Aminotransferase class I and II PhaeoP54_03112 PF13409 Glutathione S-transferase, N-terminal domain PhaeoP54_03113 PF00155 Aminotransferase class I and II PhaeoP54_03114 PF03186 CobD/Cbib protein PhaeoP54_03118 PF02463 RecF/RecN/SMC N terminal domain PhaeoP54_03120 PF07729 FCD domain PhaeoP54_03120 PF00392 Bacterial regulatory proteins, gntR family PhaeoP54_03121 PF14602 Hexapeptide repeat of succinyl-transferase PhaeoP54_03121 PF12464 Maltose acetyltransferase PhaeoP54_03121 PF00132 Bacterial transferase hexapeptide (six repeats) PhaeoP54_03122 PF00430 ATP synthase B/B' CF(0) PhaeoP54_03123 PF00430 ATP synthase B/B' CF(0) PhaeoP54_03124 PF00137 ATP synthase subunit C PhaeoP54_03125 PF00119 ATP synthase A chain PhaeoP54_03126 PF09527 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter PhaeoP54_03132 PF14492 Elongation Factor G, domain II PhaeoP54_03132 PF00679 Elongation factor G C-terminus PhaeoP54_03132 PF00009 Elongation factor Tu GTP binding domain PhaeoP54_03132 PF03764 Elongation factor G, domain IV PhaeoP54_03135 PF02881 SRP54-type protein, helical bundle domain PhaeoP54_03135 PF00448 SRP54-type protein, GTPase domain PhaeoP54_03135 PF02978 Signal peptide binding domain PhaeoP54_03137 PF13302 Acetyltransferase (GNAT) domain PhaeoP54_03140 PF00886 Ribosomal protein S16 PhaeoP54_03141 PF00881 Nitroreductase family PhaeoP54_03142 PF05239 PRC-barrel domain PhaeoP54_03142 PF01782 RimM N-terminal domain PhaeoP54_03144 PF01746 tRNA (Guanine-1)-methyltransferase PhaeoP54_03145 PF01245 Ribosomal protein L19 PhaeoP54_03146 PF01197 Ribosomal protein L31 PhaeoP54_03147 PF10609 NUBPL iron-transfer P-loop NTPase PhaeoP54_03147 PF01883 Iron-sulfur cluster assembly protein PhaeoP54_03152 PF04209 homogentisate 1,2-dioxygenase PhaeoP54_03153 PF01557 Fumarylacetoacetate (FAA) hydrolase family PhaeoP54_03155 PF01494 FAD binding domain PhaeoP54_03157 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily PhaeoP54_03158 PF14497 Glutathione S-transferase, C-terminal domain PhaeoP54_03158 PF02798 Glutathione S-transferase, N-terminal domain PhaeoP54_03160 PF04055 Radical SAM superfamily PhaeoP54_03161 PF04244 Deoxyribodipyrimidine photo-lyase-related protein PhaeoP54_03164 PF01336 OB-fold nucleic acid binding domain PhaeoP54_03164 PF07733 Bacterial DNA polymerase III alpha NTPase domain PhaeoP54_03164 PF02811 PHP domain PhaeoP54_03164 PF17657 Bacterial DNA polymerase III alpha subunit finger domain PhaeoP54_03164 PF14579 Helix-hairpin-helix motif PhaeoP54_03165 PF00491 Arginase family PhaeoP54_03166 PF00491 Arginase family PhaeoP54_03167 PF00528 Binding-protein-dependent transport system inner membrane component PhaeoP54_03168 PF00005 ABC transporter PhaeoP54_03168 PF00571 CBS domain PhaeoP54_03170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PhaeoP54_03170 PF03466 LysR substrate binding domain PhaeoP54_03177 PF01794 Ferric reductase like transmembrane component PhaeoP54_03178 PF00174 Oxidoreductase molybdopterin binding domain PhaeoP54_03179 PF01645 Conserved region in glutamate synthase PhaeoP54_03182 PF10431 C-terminal, D2-small domain, of ClpB protein PhaeoP54_03182 PF00004 ATPase family associated with various cellular activities (AAA) PhaeoP54_03182 PF07724 AAA domain (Cdc48 subfamily) PhaeoP54_03182 PF02861 Clp amino terminal domain, pathogenicity island component PhaeoP54_03182 PF17871 AAA lid domain PhaeoP54_03183 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family PhaeoP54_03185 PF00817 impB/mucB/samB family PhaeoP54_03185 PF11799 impB/mucB/samB family C-terminal domain PhaeoP54_03188 PF00444 Ribosomal protein L36 PhaeoP54_03189 PF13416 Bacterial extracellular solute-binding protein PhaeoP54_03191 PF02492 CobW/HypB/UreG, nucleotide-binding domain PhaeoP54_03191 PF07683 Cobalamin synthesis protein cobW C-terminal domain PhaeoP54_03192 PF00528 Binding-protein-dependent transport system inner membrane component PhaeoP54_03193 PF14535 AMP-binding enzyme C-terminal domain PhaeoP54_03193 PF00501 AMP-binding enzyme PhaeoP54_03194 PF00005 ABC transporter PhaeoP54_03199 PF02653 Branched-chain amino acid transport system / permease component PhaeoP54_03200 PF12399 Branched-chain amino acid ATP-binding cassette transporter PhaeoP54_03200 PF00005 ABC transporter PhaeoP54_03201 PF13193 AMP-binding enzyme C-terminal domain PhaeoP54_03201 PF00501 AMP-binding enzyme PhaeoP54_03202 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PhaeoP54_03202 PF00512 His Kinase A (phospho-acceptor) domain PhaeoP54_03203 PF00486 Transcriptional regulatory protein, C terminal PhaeoP54_03203 PF00072 Response regulator receiver domain PhaeoP54_03206 PF02798 Glutathione S-transferase, N-terminal domain PhaeoP54_03206 PF14497 Glutathione S-transferase, C-terminal domain PhaeoP54_03211 PF02646 RmuC family PhaeoP54_03212 PF08676 MutL C terminal dimerisation domain PhaeoP54_03212 PF01119 DNA mismatch repair protein, C-terminal domain PhaeoP54_03213 PF00950 ABC 3 transport family PhaeoP54_03214 PF00950 ABC 3 transport family PhaeoP54_03215 PF00005 ABC transporter PhaeoP54_03216 PF01297 Zinc-uptake complex component A periplasmic PhaeoP54_03217 PF01791 DeoC/LacD family aldolase PhaeoP54_03218 PF00171 Aldehyde dehydrogenase family PhaeoP54_03219 PF05193 Peptidase M16 inactive domain PhaeoP54_03220 PF00675 Insulinase (Peptidase family M16) PhaeoP54_03220 PF05193 Peptidase M16 inactive domain PhaeoP54_03222 PF01252 Signal peptidase (SPase) II PhaeoP54_03223 PF01808 AICARFT/IMPCHase bienzyme PhaeoP54_03223 PF02142 MGS-like domain PhaeoP54_03225 PF01189 16S rRNA methyltransferase RsmB/F PhaeoP54_03225 PF01029 NusB family PhaeoP54_03228 PF01113 Dihydrodipicolinate reductase, N-terminus PhaeoP54_03228 PF05173 Dihydrodipicolinate reductase, C-terminus PhaeoP54_03229 PF02033 Ribosome-binding factor A PhaeoP54_03231 PF16198 tRNA pseudouridylate synthase B C-terminal domain PhaeoP54_03231 PF01509 TruB family pseudouridylate synthase (N terminal domain) PhaeoP54_03234 PF00312 Ribosomal protein S15 PhaeoP54_03235 PF13847 Methyltransferase domain PhaeoP54_03235 PF10119 Predicted methyltransferase regulatory domain PhaeoP54_03236 PF01138 3' exoribonuclease family, domain 1 PhaeoP54_03236 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain PhaeoP54_03236 PF03725 3' exoribonuclease family, domain 2 PhaeoP54_03236 PF00575 S1 RNA binding domain PhaeoP54_03236 PF00013 KH domain PhaeoP54_03238 PF10417 C-terminal domain of 1-Cys peroxiredoxin PhaeoP54_03238 PF00578 AhpC/TSA family PhaeoP54_03239 PF00171 Aldehyde dehydrogenase family PhaeoP54_03242 PF01531 Glycosyl transferase family 11 PhaeoP54_03243 PF00849 RNA pseudouridylate synthase PhaeoP54_03246 PF00892 EamA-like transporter family PhaeoP54_03248 PF08669 Glycine cleavage T-protein C-terminal barrel domain PhaeoP54_03248 PF01571 Aminomethyltransferase folate-binding domain PhaeoP54_03248 PF01266 FAD dependent oxidoreductase PhaeoP54_03248 PF16350 FAD dependent oxidoreductase central domain PhaeoP54_03249 PF12833 Helix-turn-helix domain PhaeoP54_03250 PF01266 FAD dependent oxidoreductase PhaeoP54_03250 PF16350 FAD dependent oxidoreductase central domain PhaeoP54_03250 PF08669 Glycine cleavage T-protein C-terminal barrel domain PhaeoP54_03250 PF01571 Aminomethyltransferase folate-binding domain PhaeoP54_03252 PF01810 LysE type translocator PhaeoP54_03255 PF02803 Thiolase, C-terminal domain PhaeoP54_03255 PF00108 Thiolase, N-terminal domain PhaeoP54_03256 PF01740 STAS domain PhaeoP54_03257 PF13581 Histidine kinase-like ATPase domain PhaeoP54_03260 PF00085 Thioredoxin PhaeoP54_03262 PF03966 Trm112p-like protein PhaeoP54_03263 PF01494 FAD binding domain PhaeoP54_03264 PF01425 Amidase PhaeoP54_03265 PF00155 Aminotransferase class I and II PhaeoP54_03266 PF01580 FtsK/SpoIIIE family PhaeoP54_03266 PF09397 Ftsk gamma domain PhaeoP54_03266 PF17854 FtsK alpha domain PhaeoP54_03266 PF13491 4TM region of DNA translocase FtsK/SpoIIIE PhaeoP54_03269 PF03372 Endonuclease/Exonuclease/phosphatase family PhaeoP54_03270 PF00486 Transcriptional regulatory protein, C terminal PhaeoP54_03270 PF00072 Response regulator receiver domain PhaeoP54_03271 PF00925 GTP cyclohydrolase II PhaeoP54_03273 PF01168 Alanine racemase, N-terminal domain PhaeoP54_03274 PF13609 Gram-negative porin PhaeoP54_03276 PF08264 Anticodon-binding domain of tRNA PhaeoP54_03276 PF00133 tRNA synthetases class I (I, L, M and V) PhaeoP54_03276 PF13603 Leucyl-tRNA synthetase, Domain 2 PhaeoP54_03276 PF09334 tRNA synthetases class I (M) PhaeoP54_03279 PF02798 Glutathione S-transferase, N-terminal domain PhaeoP54_03279 PF14497 Glutathione S-transferase, C-terminal domain PhaeoP54_03282 PF00378 Enoyl-CoA hydratase/isomerase PhaeoP54_03282 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain PhaeoP54_03282 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain PhaeoP54_03285 PF01523 Putative modulator of DNA gyrase PhaeoP54_03286 PF00459 Inositol monophosphatase family PhaeoP54_03288 PF02606 Tetraacyldisaccharide-1-P 4'-kinase PhaeoP54_03291 PF00730 HhH-GPD superfamily base excision DNA repair protein PhaeoP54_03291 PF14815 NUDIX domain PhaeoP54_03291 PF10576 Iron-sulfur binding domain of endonuclease III PhaeoP54_03291 PF00633 Helix-hairpin-helix motif PhaeoP54_03292 PF00487 Fatty acid desaturase PhaeoP54_03293 PF00211 Adenylate and Guanylate cyclase catalytic domain PhaeoP54_03294 PF18755 Restriction Enzyme Adenine Methylase Associated PhaeoP54_03294 PF01555 DNA methylase PhaeoP54_03295 PF01351 Ribonuclease HII PhaeoP54_03299 PF00672 HAMP domain PhaeoP54_03299 PF00211 Adenylate and Guanylate cyclase catalytic domain PhaeoP54_03301 PF02780 Transketolase, C-terminal domain PhaeoP54_03301 PF02779 Transketolase, pyrimidine binding domain PhaeoP54_03302 PF02028 BCCT, betaine/carnitine/choline family transporter PhaeoP54_03303 PF00005 ABC transporter PhaeoP54_03304 PF00005 ABC transporter PhaeoP54_03304 PF12399 Branched-chain amino acid ATP-binding cassette transporter PhaeoP54_03305 PF02653 Branched-chain amino acid transport system / permease component PhaeoP54_03306 PF02653 Branched-chain amino acid transport system / permease component PhaeoP54_03308 PF01774 UreD urease accessory protein PhaeoP54_03309 PF00547 Urease, gamma subunit PhaeoP54_03311 PF00699 Urease beta subunit PhaeoP54_03312 PF00449 Urease alpha-subunit, N-terminal domain PhaeoP54_03312 PF01979 Amidohydrolase family PhaeoP54_03313 PF02814 UreE urease accessory protein, N-terminal domain PhaeoP54_03313 PF05194 UreE urease accessory protein, C-terminal domain PhaeoP54_03314 PF01730 UreF PhaeoP54_03315 PF02492 CobW/HypB/UreG, nucleotide-binding domain PhaeoP54_03317 PF02794 RTX toxin acyltransferase family PhaeoP54_03321 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family PhaeoP54_03321 PF00356 Bacterial regulatory proteins, lacI family PhaeoP54_03322 PF06224 Winged helix DNA-binding domain PhaeoP54_03324 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component PhaeoP54_03326 PF03480 Bacterial extracellular solute-binding protein, family 7 PhaeoP54_03327 PF01557 Fumarylacetoacetate (FAA) hydrolase family PhaeoP54_03329 PF01678 Diaminopimelate epimerase PhaeoP54_03330 PF00919 Uncharacterized protein family UPF0004 PhaeoP54_03330 PF04055 Radical SAM superfamily PhaeoP54_03332 PF02167 Cytochrome C1 family PhaeoP54_03333 PF00032 Cytochrome b(C-terminal)/b6/petD PhaeoP54_03333 PF00033 Cytochrome b/b6/petB PhaeoP54_03334 PF00355 Rieske [2Fe-2S] domain PhaeoP54_03334 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal PhaeoP54_03335 PF13417 Glutathione S-transferase, N-terminal domain PhaeoP54_03335 PF00043 Glutathione S-transferase, C-terminal domain PhaeoP54_03337 PF00885 6,7-dimethyl-8-ribityllumazine synthase PhaeoP54_03338 PF00005 ABC transporter PhaeoP54_03339 PF00528 Binding-protein-dependent transport system inner membrane component PhaeoP54_03342 PF01264 Chorismate synthase PhaeoP54_03343 PF13193 AMP-binding enzyme C-terminal domain PhaeoP54_03343 PF00501 AMP-binding enzyme PhaeoP54_03344 PF00892 EamA-like transporter family PhaeoP54_03345 PF01047 MarR family PhaeoP54_03346 PF02566 OsmC-like protein PhaeoP54_03347 PF01063 Amino-transferase class IV PhaeoP54_03348 PF12802 MarR family PhaeoP54_03349 PF00072 Response regulator receiver domain PhaeoP54_03349 PF00486 Transcriptional regulatory protein, C terminal PhaeoP54_03350 PF00850 Histone deacetylase domain PhaeoP54_03351 PF02609 Exonuclease VII small subunit PhaeoP54_03352 PF00348 Polyprenyl synthetase PhaeoP54_03353 PF02779 Transketolase, pyrimidine binding domain PhaeoP54_03353 PF02780 Transketolase, C-terminal domain PhaeoP54_03353 PF13292 1-deoxy-D-xylulose-5-phosphate synthase PhaeoP54_03356 PF00378 Enoyl-CoA hydratase/isomerase PhaeoP54_03358 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PhaeoP54_03358 PF02770 Acyl-CoA dehydrogenase, middle domain PhaeoP54_03358 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PhaeoP54_03359 PF01965 DJ-1/PfpI family PhaeoP54_03359 PF12833 Helix-turn-helix domain PhaeoP54_03360 PF13382 Adenine deaminase C-terminal domain PhaeoP54_03360 PF01979 Amidohydrolase family PhaeoP54_03361 PF01048 Phosphorylase superfamily PhaeoP54_03361 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus PhaeoP54_03362 PF00216 Bacterial DNA-binding protein PhaeoP54_03364 PF01641 SelR domain PhaeoP54_03365 PF01625 Peptide methionine sulfoxide reductase PhaeoP54_03366 PF05378 Hydantoinase/oxoprolinase N-terminal region PhaeoP54_03366 PF01968 Hydantoinase/oxoprolinase PhaeoP54_03367 PF08331 Domain of unknown function (DUF1730) PhaeoP54_03368 PF08240 Alcohol dehydrogenase GroES-like domain PhaeoP54_03368 PF00107 Zinc-binding dehydrogenase PhaeoP54_03369 PF00155 Aminotransferase class I and II PhaeoP54_03370 PF01381 Helix-turn-helix PhaeoP54_03370 PF07883 Cupin domain PhaeoP54_03371 PF02803 Thiolase, C-terminal domain PhaeoP54_03371 PF00108 Thiolase, N-terminal domain PhaeoP54_03372 PF00528 Binding-protein-dependent transport system inner membrane component PhaeoP54_03373 PF00528 Binding-protein-dependent transport system inner membrane component PhaeoP54_03375 PF00005 ABC transporter PhaeoP54_03375 PF08402 TOBE domain PhaeoP54_03376 PF00202 Aminotransferase class-III PhaeoP54_03377 PF00392 Bacterial regulatory proteins, gntR family PhaeoP54_03377 PF07729 FCD domain PhaeoP54_03378 PF13416 Bacterial extracellular solute-binding protein PhaeoP54_03379 PF08402 TOBE domain PhaeoP54_03379 PF00005 ABC transporter PhaeoP54_03380 PF00528 Binding-protein-dependent transport system inner membrane component PhaeoP54_03381 PF00528 Binding-protein-dependent transport system inner membrane component PhaeoP54_03383 PF16363 GDP-mannose 4,6 dehydratase PhaeoP54_03384 PF00483 Nucleotidyl transferase PhaeoP54_03385 PF02348 Cytidylyltransferase PhaeoP54_03386 PF00459 Inositol monophosphatase family PhaeoP54_03388 PF13532 2OG-Fe(II) oxygenase superfamily PhaeoP54_03389 PF00012 Hsp70 protein PhaeoP54_03390 PF00226 DnaJ domain PhaeoP54_03390 PF00684 DnaJ central domain PhaeoP54_03390 PF01556 DnaJ C terminal domain PhaeoP54_03391 PF04002 RadC-like JAB domain PhaeoP54_03394 PF07517 SecA DEAD-like domain PhaeoP54_03394 PF02810 SEC-C motif PhaeoP54_03394 PF07516 SecA Wing and Scaffold domain PhaeoP54_03394 PF01043 SecA preprotein cross-linking domain PhaeoP54_03396 PF01960 ArgJ family PhaeoP54_03397 PF00293 NUDIX domain PhaeoP54_03399 PF00009 Elongation factor Tu GTP binding domain PhaeoP54_03399 PF11987 Translation-initiation factor 2 PhaeoP54_03399 PF04760 Translation initiation factor IF-2, N-terminal region PhaeoP54_03399 PF08364 Bacterial translation initiation factor IF-2 associated region PhaeoP54_03401 PF13184 NusA-like KH domain PhaeoP54_03401 PF00575 S1 RNA binding domain PhaeoP54_03401 PF08529 NusA N-terminal domain PhaeoP54_03402 PF17384 RimP C-terminal SH3 domain PhaeoP54_03402 PF02576 RimP N-terminal domain PhaeoP54_03404 PF00561 alpha/beta hydrolase fold PhaeoP54_03407 PF00795 Carbon-nitrogen hydrolase PhaeoP54_03408 PF00462 Glutaredoxin PhaeoP54_03409 PF00156 Phosphoribosyl transferase domain PhaeoP54_03411 PF00762 Ferrochelatase PhaeoP54_03412 PF00202 Aminotransferase class-III PhaeoP54_03414 PF03734 L,D-transpeptidase catalytic domain PhaeoP54_03416 PF03734 L,D-transpeptidase catalytic domain PhaeoP54_03418 PF05958 tRNA (Uracil-5-)-methyltransferase PhaeoP54_03419 PF00005 ABC transporter PhaeoP54_03419 PF00664 ABC transporter transmembrane region PhaeoP54_03420 PF00005 ABC transporter PhaeoP54_03420 PF00664 ABC transporter transmembrane region PhaeoP54_03421 PF01743 Poly A polymerase head domain PhaeoP54_03421 PF12627 Probable RNA and SrmB- binding site of polymerase A PhaeoP54_03421 PF13735 tRNA nucleotidyltransferase domain 2 putative PhaeoP54_03422 PF00293 NUDIX domain PhaeoP54_03423 PF01430 Hsp33 protein PhaeoP54_03424 PF00293 NUDIX domain PhaeoP54_03425 PF00486 Transcriptional regulatory protein, C terminal PhaeoP54_03425 PF00072 Response regulator receiver domain PhaeoP54_03427 PF00291 Pyridoxal-phosphate dependent enzyme PhaeoP54_03427 PF00585 C-terminal regulatory domain of Threonine dehydratase PhaeoP54_03429 PF00764 Arginosuccinate synthase PhaeoP54_03433 PF01063 Amino-transferase class IV PhaeoP54_03434 PF01625 Peptide methionine sulfoxide reductase PhaeoP54_03436 PF01515 Phosphate acetyl/butaryl transferase PhaeoP54_03436 PF03949 Malic enzyme, NAD binding domain PhaeoP54_03436 PF00390 Malic enzyme, N-terminal domain PhaeoP54_03437 PF05188 MutS domain II PhaeoP54_03437 PF00488 MutS domain V PhaeoP54_03437 PF05190 MutS family domain IV PhaeoP54_03437 PF05192 MutS domain III PhaeoP54_03437 PF01624 MutS domain I PhaeoP54_03438 PF01025 GrpE PhaeoP54_03439 PF01628 HrcA protein C terminal domain PhaeoP54_03440 PF01138 3' exoribonuclease family, domain 1 PhaeoP54_03440 PF03725 3' exoribonuclease family, domain 2 PhaeoP54_03441 PF01725 Ham1 family PhaeoP54_03442 PF06969 HemN C-terminal domain PhaeoP54_03442 PF04055 Radical SAM superfamily PhaeoP54_03444 PF17762 HTH domain found in ParB protein PhaeoP54_03444 PF02195 ParB-like nuclease domain PhaeoP54_03445 PF13614 AAA domain PhaeoP54_03446 PF02527 rRNA small subunit methyltransferase G PhaeoP54_03447 PF01134 Glucose inhibited division protein A PhaeoP54_03447 PF13932 GidA associated domain PhaeoP54_03448 PF01926 50S ribosome-binding GTPase PhaeoP54_03448 PF12631 MnmE helical domain PhaeoP54_03448 PF10396 GTP-binding protein TrmE N-terminus PhaeoP54_03449 PF07498 Rho termination factor, N-terminal domain PhaeoP54_03449 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain PhaeoP54_03449 PF07497 Rho termination factor, RNA-binding domain PhaeoP54_03451 PF02545 Maf-like protein PhaeoP54_03452 PF18317 Shikimate 5'-dehydrogenase C-terminal domain PhaeoP54_03452 PF08501 Shikimate dehydrogenase substrate binding domain PhaeoP54_03452 PF01488 Shikimate / quinate 5-dehydrogenase PhaeoP54_03453 PF01121 Dephospho-CoA kinase PhaeoP54_03454 PF00929 Exonuclease PhaeoP54_03455 PF02556 Preprotein translocase subunit SecB PhaeoP54_03456 PF04186 FxsA cytoplasmic membrane protein PhaeoP54_03461 PF07724 AAA domain (Cdc48 subfamily) PhaeoP54_03463 PF00227 Proteasome subunit PhaeoP54_03468 PF00085 Thioredoxin PhaeoP54_03469 PF00580 UvrD/REP helicase N-terminal domain PhaeoP54_03469 PF12705 PD-(D/E)XK nuclease superfamily PhaeoP54_03469 PF13361 UvrD-like helicase C-terminal domain PhaeoP54_03471 PF12804 MobA-like NTP transferase domain PhaeoP54_03472 PF01636 Phosphotransferase enzyme family PhaeoP54_03473 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE PhaeoP54_03475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PhaeoP54_03475 PF00512 His Kinase A (phospho-acceptor) domain PhaeoP54_03476 PF02630 SCO1/SenC PhaeoP54_03477 PF00072 Response regulator receiver domain PhaeoP54_03478 PF01966 HD domain PhaeoP54_03480 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain PhaeoP54_03480 PF05221 S-adenosyl-L-homocysteine hydrolase PhaeoP54_03486 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus PhaeoP54_03486 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus PhaeoP54_03487 PF00814 Glycoprotease family PhaeoP54_03492 PF00732 GMC oxidoreductase PhaeoP54_03492 PF05199 GMC oxidoreductase PhaeoP54_03493 PF00501 AMP-binding enzyme PhaeoP54_03493 PF13193 AMP-binding enzyme C-terminal domain PhaeoP54_03494 PF00691 OmpA family PhaeoP54_03494 PF13677 Membrane MotB of proton-channel complex MotA/MotB PhaeoP54_03495 PF00460 Flagella basal body rod protein PhaeoP54_03495 PF07559 Flagellar basal body protein FlaE PhaeoP54_03495 PF06429 Flagellar basal body rod FlgEFG protein C-terminal PhaeoP54_03496 PF06429 Flagellar basal body rod FlgEFG protein C-terminal PhaeoP54_03496 PF00460 Flagella basal body rod protein PhaeoP54_03498 PF02119 Flagellar P-ring protein PhaeoP54_03499 PF00813 FliP family PhaeoP54_03500 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term PhaeoP54_03502 PF08345 Flagellar M-ring protein C-terminal PhaeoP54_03502 PF01514 Secretory protein of YscJ/FliF family PhaeoP54_03506 PF01618 MotA/TolQ/ExbB proton channel family PhaeoP54_03509 PF00771 FHIPEP family PhaeoP54_03511 PF01312 FlhB HrpN YscU SpaS Family PhaeoP54_03514 PF02107 Flagellar L-ring protein PhaeoP54_03516 PF00460 Flagella basal body rod protein PhaeoP54_03516 PF06429 Flagellar basal body rod FlgEFG protein C-terminal PhaeoP54_03517 PF00460 Flagella basal body rod protein PhaeoP54_03517 PF06429 Flagellar basal body rod FlgEFG protein C-terminal PhaeoP54_03518 PF01313 Bacterial export proteins, family 3 PhaeoP54_03519 PF02049 Flagellar hook-basal body complex protein FliE PhaeoP54_03520 PF00460 Flagella basal body rod protein PhaeoP54_03520 PF06429 Flagellar basal body rod FlgEFG protein C-terminal PhaeoP54_03521 PF00460 Flagella basal body rod protein PhaeoP54_03522 PF02874 ATP synthase alpha/beta family, beta-barrel domain PhaeoP54_03522 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain PhaeoP54_03522 PF18269 T3SS EscN ATPase C-terminal domain PhaeoP54_03523 PF07378 Flagellar protein FlbT PhaeoP54_03525 PF00669 Bacterial flagellin N-terminal helical region PhaeoP54_03525 PF00700 Bacterial flagellin C-terminal helical region PhaeoP54_03529 PF13861 FlgD Tudor-like domain PhaeoP54_03529 PF13860 FlgD Ig-like domain PhaeoP54_03529 PF03963 Flagellar hook capping protein - N-terminal region PhaeoP54_03534 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 PhaeoP54_03535 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein PhaeoP54_03535 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus PhaeoP54_03536 PF00005 ABC transporter PhaeoP54_03539 PF01380 SIS domain PhaeoP54_03539 PF00571 CBS domain PhaeoP54_03540 PF00570 HRDC domain PhaeoP54_03540 PF01612 3'-5' exonuclease PhaeoP54_03546 PF02673 Bacitracin resistance protein BacA PhaeoP54_03547 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster PhaeoP54_03547 PF07992 Pyridine nucleotide-disulphide oxidoreductase PhaeoP54_03548 PF04898 Glutamate synthase central domain PhaeoP54_03548 PF01645 Conserved region in glutamate synthase PhaeoP54_03548 PF00310 Glutamine amidotransferases class-II PhaeoP54_03548 PF01493 GXGXG motif PhaeoP54_03549 PF00912 Transglycosylase PhaeoP54_03550 PF00043 Glutathione S-transferase, C-terminal domain PhaeoP54_03550 PF13417 Glutathione S-transferase, N-terminal domain PhaeoP54_03551 PF00149 Calcineurin-like phosphoesterase PhaeoP54_03552 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain PhaeoP54_03552 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain PhaeoP54_03552 PF01842 ACT domain PhaeoP54_03553 PF00266 Aminotransferase class-V PhaeoP54_03556 PF01925 Sulfite exporter TauE/SafE PhaeoP54_03563 PF04055 Radical SAM superfamily PhaeoP54_03564 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) PhaeoP54_03564 PF00413 Matrixin PhaeoP54_03564 PF08548 Peptidase M10 serralysin C terminal PhaeoP54_03567 PF00585 C-terminal regulatory domain of Threonine dehydratase PhaeoP54_03567 PF00291 Pyridoxal-phosphate dependent enzyme PhaeoP54_03569 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal PhaeoP54_03569 PF00132 Bacterial transferase hexapeptide (six repeats) PhaeoP54_03569 PF14602 Hexapeptide repeat of succinyl-transferase PhaeoP54_03570 PF01175 Urocanase Rossmann-like domain PhaeoP54_03570 PF17392 Urocanase C-terminal domain PhaeoP54_03570 PF17391 Urocanase N-terminal domain PhaeoP54_03572 PF00221 Aromatic amino acid lyase PhaeoP54_03573 PF01979 Amidohydrolase family PhaeoP54_03574 PF01979 Amidohydrolase family PhaeoP54_03575 PF07702 UTRA domain PhaeoP54_03575 PF00392 Bacterial regulatory proteins, gntR family PhaeoP54_03577 PF01464 Transglycosylase SLT domain PhaeoP54_03577 PF00497 Bacterial extracellular solute-binding proteins, family 3 PhaeoP54_03580 PF07687 Peptidase dimerisation domain PhaeoP54_03580 PF01546 Peptidase family M20/M25/M40 PhaeoP54_03581 PF17876 Cold shock domain PhaeoP54_03581 PF00575 S1 RNA binding domain PhaeoP54_03581 PF00773 RNB domain PhaeoP54_03581 PF08206 Ribonuclease B OB domain PhaeoP54_03581 PF08461 Ribonuclease R winged-helix domain PhaeoP54_03584 PF13406 Transglycosylase SLT domain PhaeoP54_03585 PF03109 ABC1 family PhaeoP54_03586 PF01209 ubiE/COQ5 methyltransferase family PhaeoP54_03587 PF06827 Zinc finger found in FPG and IleRS PhaeoP54_03587 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain PhaeoP54_03587 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain PhaeoP54_03588 PF00378 Enoyl-CoA hydratase/isomerase PhaeoP54_03589 PF01649 Ribosomal protein S20 PhaeoP54_03591 PF13614 AAA domain PhaeoP54_03592 PF17762 HTH domain found in ParB protein PhaeoP54_03592 PF02195 ParB-like nuclease domain PhaeoP54_03595 PF00535 Glycosyl transferase family 2 PhaeoP54_03596 PF00535 Glycosyl transferase family 2 PhaeoP54_03600 PF00535 Glycosyl transferase family 2 PhaeoP54_03601 PF00535 Glycosyl transferase family 2 PhaeoP54_03605 PF00672 HAMP domain PhaeoP54_03605 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PhaeoP54_03608 PF01037 Lrp/AsnC ligand binding domain PhaeoP54_03608 PF13404 AsnC-type helix-turn-helix domain PhaeoP54_03610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PhaeoP54_03610 PF03466 LysR substrate binding domain PhaeoP54_03611 PF05199 GMC oxidoreductase PhaeoP54_03611 PF00732 GMC oxidoreductase PhaeoP54_03612 PF13378 Enolase C-terminal domain-like PhaeoP54_03612 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain PhaeoP54_03613 PF00171 Aldehyde dehydrogenase family PhaeoP54_03615 PF00210 Ferritin-like domain PhaeoP54_03617 PF00392 Bacterial regulatory proteins, gntR family PhaeoP54_03617 PF07729 FCD domain PhaeoP54_03618 PF05544 Proline racemase PhaeoP54_03620 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle PhaeoP54_03621 PF00528 Binding-protein-dependent transport system inner membrane component PhaeoP54_03623 PF00005 ABC transporter PhaeoP54_03623 PF08352 Oligopeptide/dipeptide transporter, C-terminal region PhaeoP54_03624 PF08352 Oligopeptide/dipeptide transporter, C-terminal region PhaeoP54_03624 PF00005 ABC transporter PhaeoP54_03626 PF00672 HAMP domain PhaeoP54_03626 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PhaeoP54_03627 PF01943 Polysaccharide biosynthesis protein PhaeoP54_03628 PF02397 Bacterial sugar transferase PhaeoP54_03629 PF01263 Aldose 1-epimerase PhaeoP54_03630 PF03150 Di-haem cytochrome c peroxidase PhaeoP54_03632 PF01047 MarR family PhaeoP54_03632 PF00480 ROK family PhaeoP54_03633 PF13407 Periplasmic binding protein domain PhaeoP54_03634 PF02653 Branched-chain amino acid transport system / permease component PhaeoP54_03635 PF00005 ABC transporter PhaeoP54_03636 PF13411 MerR HTH family regulatory protein PhaeoP54_03640 PF04679 ATP dependent DNA ligase C terminal region PhaeoP54_03640 PF04675 DNA ligase N terminus PhaeoP54_03640 PF01068 ATP dependent DNA ligase domain PhaeoP54_03642 PF01554 MatE PhaeoP54_03644 PF00171 Aldehyde dehydrogenase family PhaeoP54_03648 PF18412 Outer-membrane lipoprotein Wza C-terminal domain PhaeoP54_03648 PF10531 SLBB domain PhaeoP54_03648 PF02563 Polysaccharide biosynthesis/export protein PhaeoP54_03650 PF06082 Exopolysaccharide biosynthesis protein YbjH PhaeoP54_03651 PF00149 Calcineurin-like phosphoesterase PhaeoP54_03655 PF13406 Transglycosylase SLT domain PhaeoP54_03656 PF00574 Clp protease PhaeoP54_03658 PF02308 MgtC family PhaeoP54_03659 PF01740 STAS domain PhaeoP54_03659 PF08678 Rsbr N terminal PhaeoP54_03660 PF01740 STAS domain PhaeoP54_03662 PF13581 Histidine kinase-like ATPase domain PhaeoP54_03664 PF01546 Peptidase family M20/M25/M40 PhaeoP54_03664 PF07687 Peptidase dimerisation domain PhaeoP54_03665 PF00291 Pyridoxal-phosphate dependent enzyme PhaeoP54_03666 PF01037 Lrp/AsnC ligand binding domain PhaeoP54_03669 PF00171 Aldehyde dehydrogenase family PhaeoP54_03675 PF01980 tRNA-methyltransferase O PhaeoP54_03676 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle PhaeoP54_03677 PF00528 Binding-protein-dependent transport system inner membrane component PhaeoP54_03679 PF08352 Oligopeptide/dipeptide transporter, C-terminal region PhaeoP54_03679 PF00005 ABC transporter PhaeoP54_03680 PF04752 ChaC-like protein PhaeoP54_03683 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PhaeoP54_03683 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PhaeoP54_03683 PF02770 Acyl-CoA dehydrogenase, middle domain PhaeoP54_03687 PF03466 LysR substrate binding domain PhaeoP54_03687 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PhaeoP54_03688 PF03466 LysR substrate binding domain PhaeoP54_03688 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PhaeoP54_03689 PF08352 Oligopeptide/dipeptide transporter, C-terminal region PhaeoP54_03689 PF00005 ABC transporter PhaeoP54_03690 PF08352 Oligopeptide/dipeptide transporter, C-terminal region PhaeoP54_03690 PF00005 ABC transporter PhaeoP54_03691 PF12911 N-terminal TM domain of oligopeptide transport permease C PhaeoP54_03691 PF00528 Binding-protein-dependent transport system inner membrane component PhaeoP54_03692 PF00528 Binding-protein-dependent transport system inner membrane component PhaeoP54_03693 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle PhaeoP54_03703 PF03466 LysR substrate binding domain PhaeoP54_03703 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PhaeoP54_03704 PF08402 TOBE domain PhaeoP54_03704 PF00005 ABC transporter PhaeoP54_03706 PF00528 Binding-protein-dependent transport system inner membrane component PhaeoP54_03707 PF01547 Bacterial extracellular solute-binding protein PhaeoP54_03708 PF00149 Calcineurin-like phosphoesterase PhaeoP54_03709 PF00589 Phage integrase family PhaeoP54_03709 PF02899 Phage integrase, N-terminal SAM-like domain PhaeoP54_03713 PF02668 Taurine catabolism dioxygenase TauD, TfdA family PhaeoP54_03714 PF00884 Sulfatase PhaeoP54_03716 PF08220 DeoR-like helix-turn-helix domain PhaeoP54_03716 PF00455 DeoR C terminal sensor domain PhaeoP54_03717 PF13416 Bacterial extracellular solute-binding protein PhaeoP54_03718 PF00528 Binding-protein-dependent transport system inner membrane component PhaeoP54_03719 PF08402 TOBE domain PhaeoP54_03719 PF00005 ABC transporter PhaeoP54_03721 PF00300 Histidine phosphatase superfamily (branch 1) PhaeoP54_03725 PF13737 Transposase DDE domain PhaeoP54_03727 PF13409 Glutathione S-transferase, N-terminal domain PhaeoP54_03728 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PhaeoP54_03728 PF03466 LysR substrate binding domain PhaeoP54_03734 PF00092 von Willebrand factor type A domain PhaeoP54_03735 PF07728 AAA domain (dynein-related subfamily) PhaeoP54_03735 PF08406 CbbQ/NirQ/NorQ C-terminal PhaeoP54_03736 PF00115 Cytochrome C and Quinol oxidase polypeptide I PhaeoP54_03737 PF00034 Cytochrome c PhaeoP54_03740 PF00394 Multicopper oxidase PhaeoP54_03740 PF07732 Multicopper oxidase PhaeoP54_03741 PF03781 Sulfatase-modifying factor enzyme 1 PhaeoP54_03743 PF12833 Helix-turn-helix domain PhaeoP54_03745 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster PhaeoP54_03745 PF07992 Pyridine nucleotide-disulphide oxidoreductase PhaeoP54_03749 PF00175 Oxidoreductase NAD-binding domain PhaeoP54_03749 PF00111 2Fe-2S iron-sulfur cluster binding domain PhaeoP54_03750 PF03466 LysR substrate binding domain PhaeoP54_03750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PhaeoP54_03751 PF00848 Ring hydroxylating alpha subunit (catalytic domain) PhaeoP54_03751 PF00355 Rieske [2Fe-2S] domain PhaeoP54_03752 PF00171 Aldehyde dehydrogenase family PhaeoP54_03754 PF01266 FAD dependent oxidoreductase PhaeoP54_03754 PF08669 Glycine cleavage T-protein C-terminal barrel domain PhaeoP54_03754 PF16350 FAD dependent oxidoreductase central domain PhaeoP54_03754 PF01571 Aminomethyltransferase folate-binding domain PhaeoP54_03755 PF02615 Malate/L-lactate dehydrogenase PhaeoP54_03758 PF02028 BCCT, betaine/carnitine/choline family transporter PhaeoP54_03760 PF00171 Aldehyde dehydrogenase family PhaeoP54_03762 PF02311 AraC-like ligand binding domain PhaeoP54_03762 PF12833 Helix-turn-helix domain PhaeoP54_03764 PF08669 Glycine cleavage T-protein C-terminal barrel domain PhaeoP54_03764 PF07992 Pyridine nucleotide-disulphide oxidoreductase PhaeoP54_03764 PF17806 Sarcosine oxidase A3 domain PhaeoP54_03764 PF01571 Aminomethyltransferase folate-binding domain PhaeoP54_03765 PF04267 Sarcosine oxidase, delta subunit family PhaeoP54_03766 PF01266 FAD dependent oxidoreductase PhaeoP54_03767 PF00155 Aminotransferase class I and II PhaeoP54_03767 PF00392 Bacterial regulatory proteins, gntR family PhaeoP54_03768 PF00378 Enoyl-CoA hydratase/isomerase PhaeoP54_03769 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PhaeoP54_03769 PF02770 Acyl-CoA dehydrogenase, middle domain PhaeoP54_03769 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PhaeoP54_03769 PF12806 Acetyl-CoA dehydrogenase C-terminal like PhaeoP54_03770 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term PhaeoP54_03770 PF12833 Helix-turn-helix domain PhaeoP54_03772 PF01475 Ferric uptake regulator family PhaeoP54_03774 PF00005 ABC transporter PhaeoP54_03774 PF12704 MacB-like periplasmic core domain PhaeoP54_03774 PF02687 FtsX-like permease family PhaeoP54_03775 PF02687 FtsX-like permease family PhaeoP54_03775 PF12704 MacB-like periplasmic core domain PhaeoP54_03775 PF00005 ABC transporter PhaeoP54_03779 PF00072 Response regulator receiver domain PhaeoP54_03780 PF03705 CheR methyltransferase, all-alpha domain PhaeoP54_03780 PF01739 CheR methyltransferase, SAM binding domain PhaeoP54_03781 PF01584 CheW-like domain PhaeoP54_03782 PF01627 Hpt domain PhaeoP54_03782 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PhaeoP54_03782 PF01584 CheW-like domain PhaeoP54_03782 PF02895 Signal transducing histidine kinase, homodimeric domain PhaeoP54_03783 PF00072 Response regulator receiver domain PhaeoP54_03785 PF00672 HAMP domain PhaeoP54_03785 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PhaeoP54_03786 PF00072 Response regulator receiver domain PhaeoP54_03786 PF01339 CheB methylesterase PhaeoP54_03787 PF03975 CheD chemotactic sensory transduction PhaeoP54_03789 PF00528 Binding-protein-dependent transport system inner membrane component PhaeoP54_03790 PF03459 TOBE domain PhaeoP54_03790 PF00005 ABC transporter PhaeoP54_03791 PF00890 FAD binding domain PhaeoP54_03791 PF14537 Cytochrome c3 PhaeoP54_03792 PF01297 Zinc-uptake complex component A periplasmic PhaeoP54_03793 PF01475 Ferric uptake regulator family PhaeoP54_03794 PF00005 ABC transporter PhaeoP54_03795 PF00950 ABC 3 transport family PhaeoP54_03796 PF00512 His Kinase A (phospho-acceptor) domain PhaeoP54_03796 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PhaeoP54_03796 PF00672 HAMP domain PhaeoP54_03796 PF00072 Response regulator receiver domain PhaeoP54_03796 PF01627 Hpt domain PhaeoP54_03796 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) PhaeoP54_03798 PF00391 PEP-utilising enzyme, mobile domain PhaeoP54_03798 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain PhaeoP54_03800 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain PhaeoP54_03800 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain PhaeoP54_03800 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain PhaeoP54_03802 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain PhaeoP54_03802 PF00205 Thiamine pyrophosphate enzyme, central domain PhaeoP54_03802 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain PhaeoP54_03803 PF00155 Aminotransferase class I and II PhaeoP54_03804 PF13977 BetI-type transcriptional repressor, C-terminal PhaeoP54_03804 PF00440 Bacterial regulatory proteins, tetR family PhaeoP54_03805 PF00005 ABC transporter PhaeoP54_03806 PF00497 Bacterial extracellular solute-binding proteins, family 3 PhaeoP54_03807 PF00528 Binding-protein-dependent transport system inner membrane component PhaeoP54_03808 PF00528 Binding-protein-dependent transport system inner membrane component PhaeoP54_03809 PF13614 AAA domain PhaeoP54_03810 PF02195 ParB-like nuclease domain PhaeoP54_03810 PF07506 RepB plasmid partitioning protein PhaeoP54_03811 PF11800 Replication protein C C-terminal region PhaeoP54_03811 PF03428 Replication protein C N-terminal domain PhaeoP54_03816 PF00589 Phage integrase family PhaeoP54_03816 PF02899 Phage integrase, N-terminal SAM-like domain PhaeoP54_03817 PF00589 Phage integrase family PhaeoP54_03818 PF00589 Phage integrase family PhaeoP54_03818 PF02899 Phage integrase, N-terminal SAM-like domain PhaeoP54_03824 PF04221 RelB antitoxin PhaeoP54_03832 PF02694 Uncharacterised BCR, YnfA/UPF0060 family PhaeoP54_03833 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain PhaeoP54_03834 PF00403 Heavy-metal-associated domain PhaeoP54_03834 PF07992 Pyridine nucleotide-disulphide oxidoreductase PhaeoP54_03834 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain PhaeoP54_03840 PF13411 MerR HTH family regulatory protein PhaeoP54_03848 PF03432 Relaxase/Mobilisation nuclease domain PhaeoP54_03849 PF02534 Type IV secretory system Conjugative DNA transfer PhaeoP54_03857 PF00437 Type II/IV secretion system protein PhaeoP54_03858 PF03743 Bacterial conjugation TrbI-like protein PhaeoP54_03862 PF01464 Transglycosylase SLT domain PhaeoP54_03862 PF10145 Phage-related minor tail protein PhaeoP54_03862 PF01551 Peptidase family M23 PhaeoP54_03867 PF01551 Peptidase family M23 PhaeoP54_03867 PF10145 Phage-related minor tail protein PhaeoP54_03867 PF01464 Transglycosylase SLT domain PhaeoP54_03873 PF01545 Cation efflux family PhaeoP54_03875 PF02683 Cytochrome C biogenesis protein transmembrane region PhaeoP54_03876 PF02694 Uncharacterised BCR, YnfA/UPF0060 family PhaeoP54_03877 PF13411 MerR HTH family regulatory protein PhaeoP54_03878 PF02630 SCO1/SenC PhaeoP54_03879 PF02600 Disulfide bond formation protein DsbB PhaeoP54_03882 PF02630 SCO1/SenC PhaeoP54_03885 PF02535 ZIP Zinc transporter PhaeoP54_03886 PF01252 Signal peptidase (SPase) II PhaeoP54_03887 PF00795 Carbon-nitrogen hydrolase PhaeoP54_03889 PF01804 Penicillin amidase PhaeoP54_03891 PF02742 Iron dependent repressor, metal binding and dimerisation domain PhaeoP54_03891 PF01325 Iron dependent repressor, N-terminal DNA binding domain PhaeoP54_03894 PF00005 ABC transporter PhaeoP54_03895 PF00528 Binding-protein-dependent transport system inner membrane component PhaeoP54_03896 PF03734 L,D-transpeptidase catalytic domain PhaeoP54_03897 PF00403 Heavy-metal-associated domain PhaeoP54_03900 PF00239 Resolvase, N terminal domain PhaeoP54_03902 PF00376 MerR family regulatory protein PhaeoP54_03902 PF13614 AAA domain PhaeoP54_03903 PF02195 ParB-like nuclease domain PhaeoP54_03903 PF17762 HTH domain found in ParB protein PhaeoP54_03912 PF00873 AcrB/AcrD/AcrF family PhaeoP54_03913 PF12833 Helix-turn-helix domain PhaeoP54_03913 PF12852 Cupin PhaeoP54_03914 PF00196 Bacterial regulatory proteins, luxR family PhaeoP54_03915 PF02661 Fic/DOC family PhaeoP54_03915 PF12728 Helix-turn-helix domain PhaeoP54_03917 PF00005 ABC transporter PhaeoP54_03917 PF00664 ABC transporter transmembrane region PhaeoP54_03918 PF01261 Xylose isomerase-like TIM barrel PhaeoP54_03919 PF00550 Phosphopantetheine attachment site PhaeoP54_03920 PF00501 AMP-binding enzyme PhaeoP54_03920 PF13193 AMP-binding enzyme C-terminal domain PhaeoP54_03921 PF04183 IucA / IucC family PhaeoP54_03921 PF06276 Ferric iron reductase FhuF-like transporter PhaeoP54_03922 PF04183 IucA / IucC family PhaeoP54_03922 PF06276 Ferric iron reductase FhuF-like transporter PhaeoP54_03924 PF01497 Periplasmic binding protein PhaeoP54_03925 PF01032 FecCD transport family PhaeoP54_03926 PF01032 FecCD transport family PhaeoP54_03927 PF00005 ABC transporter PhaeoP54_03928 PF01266 FAD dependent oxidoreductase PhaeoP54_03931 PF12833 Helix-turn-helix domain PhaeoP54_03931 PF01965 DJ-1/PfpI family PhaeoP54_03932 PF02347 Glycine cleavage system P-protein PhaeoP54_03933 PF01597 Glycine cleavage H-protein PhaeoP54_03934 PF01571 Aminomethyltransferase folate-binding domain PhaeoP54_03934 PF08669 Glycine cleavage T-protein C-terminal barrel domain PhaeoP54_03935 PF01235 Sodium:alanine symporter family PhaeoP54_03936 PF04055 Radical SAM superfamily PhaeoP54_03936 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family PhaeoP54_03937 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain PhaeoP54_03937 PF07992 Pyridine nucleotide-disulphide oxidoreductase PhaeoP54_03939 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) PhaeoP54_03940 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus PhaeoP54_03940 PF00361 Proton-conducting membrane transporter PhaeoP54_03941 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PhaeoP54_03941 PF03466 LysR substrate binding domain PhaeoP54_03942 PF01408 Oxidoreductase family, NAD-binding Rossmann fold PhaeoP54_03942 PF02894 Oxidoreductase family, C-terminal alpha/beta domain PhaeoP54_03944 PF17912 MalK OB fold domain PhaeoP54_03944 PF00005 ABC transporter PhaeoP54_03945 PF00528 Binding-protein-dependent transport system inner membrane component PhaeoP54_03947 PF01547 Bacterial extracellular solute-binding protein PhaeoP54_03950 PF01408 Oxidoreductase family, NAD-binding Rossmann fold PhaeoP54_03950 PF02894 Oxidoreductase family, C-terminal alpha/beta domain PhaeoP54_03951 PF00171 Aldehyde dehydrogenase family PhaeoP54_03952 PF07690 Major Facilitator Superfamily PhaeoP54_03953 PF00175 Oxidoreductase NAD-binding domain PhaeoP54_03953 PF00042 Globin PhaeoP54_03953 PF00970 Oxidoreductase FAD-binding domain PhaeoP54_03954 PF02082 Transcriptional regulator PhaeoP54_03956 PF08281 Sigma-70, region 4 PhaeoP54_03956 PF04542 Sigma-70 region 2 PhaeoP54_03958 PF00141 Peroxidase PhaeoP54_03959 PF03466 LysR substrate binding domain PhaeoP54_03959 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PhaeoP54_03960 PF07731 Multicopper oxidase PhaeoP54_03960 PF07732 Multicopper oxidase PhaeoP54_03960 PF00394 Multicopper oxidase PhaeoP54_03961 PF03109 ABC1 family PhaeoP54_03962 PF11800 Replication protein C C-terminal region PhaeoP54_03962 PF03428 Replication protein C N-terminal domain PhaeoP54_03968 PF03449 Transcription elongation factor, N-terminal PhaeoP54_03968 PF01272 Transcription elongation factor, GreA/GreB, C-term PhaeoP54_03969 PF00756 Putative esterase PhaeoP54_03970 PF00107 Zinc-binding dehydrogenase PhaeoP54_03970 PF08240 Alcohol dehydrogenase GroES-like domain PhaeoP54_03971 PF03466 LysR substrate binding domain PhaeoP54_03971 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PhaeoP54_03972 PF01062 Bestrophin, RFP-TM, chloride channel PhaeoP54_03974 PF17755 UvrA DNA-binding domain PhaeoP54_03975 PF08240 Alcohol dehydrogenase GroES-like domain PhaeoP54_03975 PF00107 Zinc-binding dehydrogenase PhaeoP54_03980 PF02796 Helix-turn-helix domain of resolvase PhaeoP54_03980 PF00239 Resolvase, N terminal domain PhaeoP54_03981 PF13361 UvrD-like helicase C-terminal domain PhaeoP54_03981 PF00580 UvrD/REP helicase N-terminal domain PhaeoP54_03982 PF01555 DNA methylase PhaeoP54_03982 PF18273 Type III R-M EcoP15I C-terminal domain PhaeoP54_03986 PF10145 Phage-related minor tail protein PhaeoP54_03986 PF01464 Transglycosylase SLT domain PhaeoP54_03986 PF01551 Peptidase family M23 PhaeoP54_03989 PF03135 CagE, TrbE, VirB family, component of type IV transporter system PhaeoP54_03991 PF01464 Transglycosylase SLT domain PhaeoP54_03991 PF01551 Peptidase family M23 PhaeoP54_03991 PF10145 Phage-related minor tail protein PhaeoP54_03994 PF03524 Conjugal transfer protein PhaeoP54_03995 PF03743 Bacterial conjugation TrbI-like protein PhaeoP54_03996 PF00437 Type II/IV secretion system protein PhaeoP54_04000 PF02534 Type IV secretory system Conjugative DNA transfer PhaeoP54_04009 PF18818 Metallopeptidase superfamily domain PhaeoP54_04009 PF08401 Domain of unknown function (DUF1738) PhaeoP54_04027 PF01850 PIN domain PhaeoP54_04034 PF10134 Replication initiator protein A PhaeoP54_04035 PF00376 MerR family regulatory protein PhaeoP54_04035 PF13614 AAA domain PhaeoP54_04037 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain PhaeoP54_04037 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain PhaeoP54_04037 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain PhaeoP54_04038 PF16363 GDP-mannose 4,6 dehydratase PhaeoP54_04039 PF00535 Glycosyl transferase family 2 PhaeoP54_04042 PF00005 ABC transporter PhaeoP54_04043 PF03275 UDP-galactopyranose mutase PhaeoP54_04050 PF00005 ABC transporter PhaeoP54_04050 PF00664 ABC transporter transmembrane region PhaeoP54_04051 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion PhaeoP54_04051 PF00529 HlyD membrane-fusion protein of T1SS PhaeoP54_04052 PF16363 GDP-mannose 4,6 dehydratase PhaeoP54_04053 PF01370 NAD dependent epimerase/dehydratase family PhaeoP54_04054 PF00483 Nucleotidyl transferase PhaeoP54_04054 PF01050 Mannose-6-phosphate isomerase PhaeoP54_04057 PF08548 Peptidase M10 serralysin C terminal PhaeoP54_04057 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) PhaeoP54_04058 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase PhaeoP54_04059 PF16363 GDP-mannose 4,6 dehydratase PhaeoP54_04060 PF04321 RmlD substrate binding domain PhaeoP54_04061 PF00483 Nucleotidyl transferase PhaeoP54_04063 PF02563 Polysaccharide biosynthesis/export protein PhaeoP54_04065 PF02397 Bacterial sugar transferase PhaeoP54_04066 PF02719 Polysaccharide biosynthesis protein PhaeoP54_04067 PF06082 Exopolysaccharide biosynthesis protein YbjH PhaeoP54_04070 PF00005 ABC transporter PhaeoP54_04071 PF00528 Binding-protein-dependent transport system inner membrane component PhaeoP54_04072 PF00497 Bacterial extracellular solute-binding proteins, family 3 PhaeoP54_04073 PF00501 AMP-binding enzyme PhaeoP54_04073 PF13193 AMP-binding enzyme C-terminal domain PhaeoP54_04073 PF00668 Condensation domain PhaeoP54_04073 PF00550 Phosphopantetheine attachment site PhaeoP54_04081 PF00664 ABC transporter transmembrane region PhaeoP54_04081 PF00005 ABC transporter PhaeoP54_04082 PF00529 HlyD membrane-fusion protein of T1SS