PhaeoP54_01010 d68873c3e8233e5b6da2fad32ca5dfaa 403 Hamap MF_01358 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic [ndhH]. 6 403 48.349 T 14-10-2018 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PhaeoP54_01010 d68873c3e8233e5b6da2fad32ca5dfaa 403 SUPERFAMILY SSF56762 28 403 1.44E-135 T 14-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PhaeoP54_01010 d68873c3e8233e5b6da2fad32ca5dfaa 403 TIGRFAM TIGR01962 NuoD: NADH dehydrogenase (quinone), D subunit 18 403 4.3E-175 T 14-10-2018 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PhaeoP54_01010 d68873c3e8233e5b6da2fad32ca5dfaa 403 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 132 403 9.2E-121 T 14-10-2018 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PhaeoP54_01010 d68873c3e8233e5b6da2fad32ca5dfaa 403 ProSitePatterns PS00535 Respiratory chain NADH dehydrogenase 49 Kd subunit signature. 55 66 - T 14-10-2018 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PhaeoP54_01010 d68873c3e8233e5b6da2fad32ca5dfaa 403 Gene3D G3DSA:1.10.645.20 16 403 3.8E-171 T 14-10-2018 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PhaeoP54_02797 a47988b8fcfbcefdb8b5e22c4bd80847 219 Gene3D G3DSA:3.30.1330.60 78 218 6.6E-46 T 14-10-2018 IPR036737 OmpA-like domain superfamily PhaeoP54_02797 a47988b8fcfbcefdb8b5e22c4bd80847 219 PRINTS PR01021 OMPA domain signature 114 136 7.7E-12 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 PhaeoP54_02797 a47988b8fcfbcefdb8b5e22c4bd80847 219 PRINTS PR01021 OMPA domain signature 159 175 7.7E-12 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 PhaeoP54_02797 a47988b8fcfbcefdb8b5e22c4bd80847 219 PRINTS PR01021 OMPA domain signature 144 159 7.7E-12 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 PhaeoP54_02797 a47988b8fcfbcefdb8b5e22c4bd80847 219 SUPERFAMILY SSF103088 101 216 4.05E-37 T 14-10-2018 IPR036737 OmpA-like domain superfamily PhaeoP54_02797 a47988b8fcfbcefdb8b5e22c4bd80847 219 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 197 217 1.2E-7 T 14-10-2018 PhaeoP54_02797 a47988b8fcfbcefdb8b5e22c4bd80847 219 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 159 176 1.2E-7 T 14-10-2018 PhaeoP54_02797 a47988b8fcfbcefdb8b5e22c4bd80847 219 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 177 196 1.2E-7 T 14-10-2018 PhaeoP54_02797 a47988b8fcfbcefdb8b5e22c4bd80847 219 Pfam PF00691 OmpA family 113 208 1.3E-23 T 14-10-2018 IPR006665 OmpA-like domain PhaeoP54_02797 a47988b8fcfbcefdb8b5e22c4bd80847 219 Pfam PF13441 YMGG-like Gly-zipper 33 78 8.3E-10 T 14-10-2018 IPR027367 YMGG-like Gly-zipper PhaeoP54_01433 3346a402d50f4a30787186746b9fbca0 535 SUPERFAMILY SSF51735 2 131 7.26E-19 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PhaeoP54_01433 3346a402d50f4a30787186746b9fbca0 535 Pfam PF13761 Domain of unknown function (DUF4166) 368 524 1.5E-26 T 14-10-2018 IPR025311 Domain of unknown function DUF4166 PhaeoP54_01433 3346a402d50f4a30787186746b9fbca0 535 Gene3D G3DSA:3.40.50.720 2 144 1.6E-20 T 14-10-2018 PhaeoP54_01433 3346a402d50f4a30787186746b9fbca0 535 Pfam PF03435 Saccharopine dehydrogenase NADP binding domain 3 121 2.2E-9 T 14-10-2018 IPR005097 Saccharopine dehydrogenase, NADP binding domain GO:0016491|GO:0055114 PhaeoP54_02774 25a2f7c9f0b121272c0fdac45c465f0b 268 Gene3D G3DSA:3.20.20.70 3 259 1.1E-49 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PhaeoP54_02774 25a2f7c9f0b121272c0fdac45c465f0b 268 Pfam PF05853 beta-keto acid cleavage enzyme 6 255 3.4E-45 T 14-10-2018 IPR008567 3-keto-5-aminohexanoate cleavage enzyme GO:0016740|GO:0019475 KEGG: 00310+2.3.1.247 PhaeoP54_00907 764bb158dfd980bd7b80a55e3671976c 324 ProSitePatterns PS00095 C-5 cytosine-specific DNA methylases C-terminal signature. 287 305 - T 14-10-2018 IPR031303 DNA methylase, C-5 cytosine-specific, conserved site KEGG: 00270+2.1.1.37 PhaeoP54_00907 764bb158dfd980bd7b80a55e3671976c 324 SUPERFAMILY SSF53335 1 306 1.3E-78 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PhaeoP54_00907 764bb158dfd980bd7b80a55e3671976c 324 TIGRFAM TIGR00675 dcm: DNA (cytosine-5-)-methyltransferase 5 193 6.0E-43 T 14-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 PhaeoP54_00907 764bb158dfd980bd7b80a55e3671976c 324 ProSitePatterns PS00094 C-5 cytosine-specific DNA methylases active site. 67 79 - T 14-10-2018 IPR018117 DNA methylase, C-5 cytosine-specific, active site KEGG: 00270+2.1.1.37|Reactome: R-HSA-212300|Reactome: R-HSA-4655427|Reactome: R-HSA-5334118 PhaeoP54_00907 764bb158dfd980bd7b80a55e3671976c 324 Gene3D G3DSA:3.40.50.150 5 299 1.9E-72 T 14-10-2018 PhaeoP54_00907 764bb158dfd980bd7b80a55e3671976c 324 Pfam PF00145 C-5 cytosine-specific DNA methylase 3 306 1.5E-66 T 14-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 PhaeoP54_00907 764bb158dfd980bd7b80a55e3671976c 324 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 151 164 1.6E-12 T 14-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 PhaeoP54_00907 764bb158dfd980bd7b80a55e3671976c 324 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 105 119 1.6E-12 T 14-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 PhaeoP54_00907 764bb158dfd980bd7b80a55e3671976c 324 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 3 19 1.6E-12 T 14-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 PhaeoP54_00907 764bb158dfd980bd7b80a55e3671976c 324 Gene3D G3DSA:3.90.120.10 179 271 1.9E-72 T 14-10-2018 PhaeoP54_01082 66f5732373b09b51884a42c4d6eb0bef 68 PIRSF PIRSF002599 1 68 3.1E-22 T 14-10-2018 IPR012156 Cold shock, CspA GO:0003676 PhaeoP54_01082 66f5732373b09b51884a42c4d6eb0bef 68 Gene3D G3DSA:2.40.50.140 1 65 9.5E-25 T 14-10-2018 PhaeoP54_01082 66f5732373b09b51884a42c4d6eb0bef 68 Pfam PF00313 'Cold-shock' DNA-binding domain 3 65 2.5E-24 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 PhaeoP54_01082 66f5732373b09b51884a42c4d6eb0bef 68 PRINTS PR00050 Cold shock protein signature 4 19 3.1E-14 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 PhaeoP54_01082 66f5732373b09b51884a42c4d6eb0bef 68 PRINTS PR00050 Cold shock protein signature 40 58 3.1E-14 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 PhaeoP54_01082 66f5732373b09b51884a42c4d6eb0bef 68 PRINTS PR00050 Cold shock protein signature 25 34 3.1E-14 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 PhaeoP54_01082 66f5732373b09b51884a42c4d6eb0bef 68 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 14-10-2018 IPR019844 Cold-shock conserved site PhaeoP54_01082 66f5732373b09b51884a42c4d6eb0bef 68 SMART SM00357 3 68 2.1E-23 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 PhaeoP54_01082 66f5732373b09b51884a42c4d6eb0bef 68 SUPERFAMILY SSF50249 1 65 1.84E-21 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold PhaeoP54_01448 262cc21cfe3a205dd96bb57ec133487b 522 SUPERFAMILY SSF52402 196 415 2.03E-59 T 14-10-2018 PhaeoP54_01448 262cc21cfe3a205dd96bb57ec133487b 522 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 6 522 51.834 T 14-10-2018 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221 PhaeoP54_01448 262cc21cfe3a205dd96bb57ec133487b 522 Gene3D G3DSA:3.40.50.880 1 200 2.4E-46 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like PhaeoP54_01448 262cc21cfe3a205dd96bb57ec133487b 522 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 212 522 1.2E-142 T 14-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 PhaeoP54_01448 262cc21cfe3a205dd96bb57ec133487b 522 Gene3D G3DSA:3.40.50.620 208 402 1.4E-75 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PhaeoP54_01448 262cc21cfe3a205dd96bb57ec133487b 522 SUPERFAMILY SSF54810 402 522 7.32E-51 T 14-10-2018 PhaeoP54_01448 262cc21cfe3a205dd96bb57ec133487b 522 Gene3D G3DSA:3.30.300.10 403 522 4.3E-51 T 14-10-2018 PhaeoP54_01448 262cc21cfe3a205dd96bb57ec133487b 522 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 10 199 1.8E-59 T 14-10-2018 IPR004739 GMP synthase, glutamine amidotransferase GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 PhaeoP54_01448 262cc21cfe3a205dd96bb57ec133487b 522 Pfam PF00117 Glutamine amidotransferase class-I 11 196 1.7E-37 T 14-10-2018 IPR017926 Glutamine amidotransferase PhaeoP54_01448 262cc21cfe3a205dd96bb57ec133487b 522 PRINTS PR00097 Anthranilate synthase component II signature 175 188 7.3E-5 T 14-10-2018 PhaeoP54_01448 262cc21cfe3a205dd96bb57ec133487b 522 PRINTS PR00097 Anthranilate synthase component II signature 81 92 7.3E-5 T 14-10-2018 PhaeoP54_01448 262cc21cfe3a205dd96bb57ec133487b 522 PRINTS PR00097 Anthranilate synthase component II signature 54 63 7.3E-5 T 14-10-2018 PhaeoP54_01448 262cc21cfe3a205dd96bb57ec133487b 522 Pfam PF02540 NAD synthase 217 270 1.5E-6 T 14-10-2018 IPR022310 NAD/GMP synthase PhaeoP54_01448 262cc21cfe3a205dd96bb57ec133487b 522 Pfam PF00958 GMP synthase C terminal domain 430 521 2.6E-40 T 14-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 PhaeoP54_01448 262cc21cfe3a205dd96bb57ec133487b 522 PRINTS PR00096 Glutamine amidotransferase superfamily signature 54 63 4.1E-7 T 14-10-2018 PhaeoP54_01448 262cc21cfe3a205dd96bb57ec133487b 522 PRINTS PR00096 Glutamine amidotransferase superfamily signature 81 92 4.1E-7 T 14-10-2018 PhaeoP54_01448 262cc21cfe3a205dd96bb57ec133487b 522 PRINTS PR00096 Glutamine amidotransferase superfamily signature 175 188 4.1E-7 T 14-10-2018 PhaeoP54_01448 262cc21cfe3a205dd96bb57ec133487b 522 SUPERFAMILY SSF52317 6 234 2.95E-51 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like PhaeoP54_00950 1782e88ed3e40bcba8ba0e82eae26f22 297 Pfam PF13354 Beta-lactamase enzyme family 54 261 3.7E-42 T 14-10-2018 PhaeoP54_00950 1782e88ed3e40bcba8ba0e82eae26f22 297 Gene3D G3DSA:3.40.710.10 26 290 4.6E-74 T 14-10-2018 PhaeoP54_00950 1782e88ed3e40bcba8ba0e82eae26f22 297 SUPERFAMILY SSF56601 29 284 5.36E-71 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like PhaeoP54_00950 1782e88ed3e40bcba8ba0e82eae26f22 297 ProSitePatterns PS00146 Beta-lactamase class-A active site. 66 81 - T 14-10-2018 IPR023650 Beta-lactamase, class-A active site KEGG: 00311+3.5.2.6 PhaeoP54_00950 1782e88ed3e40bcba8ba0e82eae26f22 297 PRINTS PR00118 Beta-lactamase class A signature 33 57 1.9E-55 T 14-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 PhaeoP54_00950 1782e88ed3e40bcba8ba0e82eae26f22 297 PRINTS PR00118 Beta-lactamase class A signature 221 236 1.9E-55 T 14-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 PhaeoP54_00950 1782e88ed3e40bcba8ba0e82eae26f22 297 PRINTS PR00118 Beta-lactamase class A signature 168 193 1.9E-55 T 14-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 PhaeoP54_00950 1782e88ed3e40bcba8ba0e82eae26f22 297 PRINTS PR00118 Beta-lactamase class A signature 204 219 1.9E-55 T 14-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 PhaeoP54_00950 1782e88ed3e40bcba8ba0e82eae26f22 297 PRINTS PR00118 Beta-lactamase class A signature 106 131 1.9E-55 T 14-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 PhaeoP54_00950 1782e88ed3e40bcba8ba0e82eae26f22 297 PRINTS PR00118 Beta-lactamase class A signature 64 81 1.9E-55 T 14-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 PhaeoP54_00950 1782e88ed3e40bcba8ba0e82eae26f22 297 PRINTS PR00118 Beta-lactamase class A signature 142 166 1.9E-55 T 14-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 PhaeoP54_02279 1bcdfff582daaed5b6493e64be03412c 246 SUPERFAMILY SSF103025 2 180 9.1E-48 T 14-10-2018 PhaeoP54_02279 1bcdfff582daaed5b6493e64be03412c 246 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 166 225 3.7E-5 T 14-10-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 PhaeoP54_02279 1bcdfff582daaed5b6493e64be03412c 246 Gene3D G3DSA:3.30.70.1400 5 89 2.3E-26 T 14-10-2018 PhaeoP54_02279 1bcdfff582daaed5b6493e64be03412c 246 PIRSF PIRSF006487 1 107 1.9E-8 T 14-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 PhaeoP54_02279 1bcdfff582daaed5b6493e64be03412c 246 PIRSF PIRSF006487 126 218 15.0 T 14-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 PhaeoP54_02279 1bcdfff582daaed5b6493e64be03412c 246 Pfam PF01571 Aminomethyltransferase folate-binding domain 1 105 2.7E-8 T 14-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain PhaeoP54_02279 1bcdfff582daaed5b6493e64be03412c 246 Gene3D G3DSA:3.30.1360.120 113 239 3.0E-20 T 14-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 PhaeoP54_02279 1bcdfff582daaed5b6493e64be03412c 246 TIGRFAM TIGR03317 ygfZ_signature: folate-binding protein YgfZ 127 191 4.4E-22 T 14-10-2018 IPR017703 YgfZ/GcvT conserved site PhaeoP54_00013 79566b2319273553254b29477115a53e 484 TIGRFAM TIGR01780 SSADH: succinate-semialdehyde dehydrogenase 30 476 1.3E-207 T 14-10-2018 IPR010102 Succinate semialdehyde dehydrogenase GO:0009013|GO:0009450|GO:0055114 Reactome: R-HSA-916853 PhaeoP54_00013 79566b2319273553254b29477115a53e 484 Gene3D G3DSA:3.40.605.10 19 473 1.0E-180 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 PhaeoP54_00013 79566b2319273553254b29477115a53e 484 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 282 293 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 PhaeoP54_00013 79566b2319273553254b29477115a53e 484 SUPERFAMILY SSF53720 5 480 7.98E-171 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 PhaeoP54_00013 79566b2319273553254b29477115a53e 484 Pfam PF00171 Aldehyde dehydrogenase family 19 477 3.2E-168 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 PhaeoP54_00013 79566b2319273553254b29477115a53e 484 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 254 261 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 PhaeoP54_00013 79566b2319273553254b29477115a53e 484 Gene3D G3DSA:3.40.309.10 261 450 1.0E-180 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 PhaeoP54_03475 47b72ec15d90a797593cd260ca8826cc 484 Pfam PF00512 His Kinase A (phospho-acceptor) domain 231 287 1.0E-8 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PhaeoP54_03475 47b72ec15d90a797593cd260ca8826cc 484 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 343 458 1.5E-14 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PhaeoP54_03475 47b72ec15d90a797593cd260ca8826cc 484 Gene3D G3DSA:1.10.287.130 214 293 4.0E-12 T 14-10-2018 PhaeoP54_03475 47b72ec15d90a797593cd260ca8826cc 484 PRINTS PR00344 Bacterial sensor protein C-terminal signature 413 431 8.4E-5 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PhaeoP54_03475 47b72ec15d90a797593cd260ca8826cc 484 PRINTS PR00344 Bacterial sensor protein C-terminal signature 373 387 8.4E-5 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PhaeoP54_03475 47b72ec15d90a797593cd260ca8826cc 484 SMART SM00387 338 464 4.4E-19 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PhaeoP54_03475 47b72ec15d90a797593cd260ca8826cc 484 Gene3D G3DSA:3.30.565.10 298 464 6.6E-18 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PhaeoP54_03475 47b72ec15d90a797593cd260ca8826cc 484 SMART SM00388 230 296 3.0E-7 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PhaeoP54_03475 47b72ec15d90a797593cd260ca8826cc 484 SUPERFAMILY SSF47384 218 287 2.16E-8 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 PhaeoP54_03475 47b72ec15d90a797593cd260ca8826cc 484 SUPERFAMILY SSF55874 293 440 1.31E-21 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PhaeoP54_00014 7b066992441f4b0358bb0c2051215ede 163 Gene3D G3DSA:1.10.10.10 3 58 3.8E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_00014 7b066992441f4b0358bb0c2051215ede 163 Pfam PF13412 Winged helix-turn-helix DNA-binding 7 54 1.9E-18 T 14-10-2018 PhaeoP54_00014 7b066992441f4b0358bb0c2051215ede 163 SUPERFAMILY SSF46785 6 65 1.0E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_00014 7b066992441f4b0358bb0c2051215ede 163 Gene3D G3DSA:3.30.70.920 59 153 9.2E-20 T 14-10-2018 PhaeoP54_00014 7b066992441f4b0358bb0c2051215ede 163 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 34 53 7.2E-15 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 PhaeoP54_00014 7b066992441f4b0358bb0c2051215ede 163 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 7 23 7.2E-15 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 PhaeoP54_00014 7b066992441f4b0358bb0c2051215ede 163 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 23 34 7.2E-15 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 PhaeoP54_00014 7b066992441f4b0358bb0c2051215ede 163 SUPERFAMILY SSF54909 68 155 4.29E-17 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel PhaeoP54_00014 7b066992441f4b0358bb0c2051215ede 163 Pfam PF01037 Lrp/AsnC ligand binding domain 74 146 4.4E-17 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain PhaeoP54_00014 7b066992441f4b0358bb0c2051215ede 163 ProSitePatterns PS00519 AsnC-type HTH domain signature. 25 51 - T 14-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site PhaeoP54_00014 7b066992441f4b0358bb0c2051215ede 163 SMART SM00344 7 116 9.5E-42 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 PhaeoP54_03959 52dcdeed3c5b068c8f7bf13844fa404c 314 Gene3D G3DSA:3.40.190.10 170 277 1.4E-55 T 14-10-2018 PhaeoP54_03959 52dcdeed3c5b068c8f7bf13844fa404c 314 Gene3D G3DSA:3.40.190.10 100 305 1.4E-55 T 14-10-2018 PhaeoP54_03959 52dcdeed3c5b068c8f7bf13844fa404c 314 SUPERFAMILY SSF53850 98 311 3.8E-34 T 14-10-2018 PhaeoP54_03959 52dcdeed3c5b068c8f7bf13844fa404c 314 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 70 2.6E-19 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PhaeoP54_03959 52dcdeed3c5b068c8f7bf13844fa404c 314 SUPERFAMILY SSF46785 6 119 3.55E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_03959 52dcdeed3c5b068c8f7bf13844fa404c 314 Gene3D G3DSA:1.10.10.10 6 94 1.5E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_03959 52dcdeed3c5b068c8f7bf13844fa404c 314 Pfam PF03466 LysR substrate binding domain 97 307 2.7E-38 T 14-10-2018 IPR005119 LysR, substrate-binding PhaeoP54_03959 52dcdeed3c5b068c8f7bf13844fa404c 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 27 38 1.2E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PhaeoP54_03959 52dcdeed3c5b068c8f7bf13844fa404c 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 38 48 1.2E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PhaeoP54_03959 52dcdeed3c5b068c8f7bf13844fa404c 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 48 59 1.2E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PhaeoP54_03516 57cb8b258e26c067080910c47f118b05 261 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 146 243 1.8E-31 T 14-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G PhaeoP54_03516 57cb8b258e26c067080910c47f118b05 261 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 3 136 1.5E-43 T 14-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G PhaeoP54_03516 57cb8b258e26c067080910c47f118b05 261 Pfam PF00460 Flagella basal body rod protein 4 33 8.9E-12 T 14-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 PhaeoP54_03516 57cb8b258e26c067080910c47f118b05 261 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 183 259 3.3E-23 T 14-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain PhaeoP54_03516 57cb8b258e26c067080910c47f118b05 261 SUPERFAMILY SSF117143 92 222 3.79E-34 T 14-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like PhaeoP54_03516 57cb8b258e26c067080910c47f118b05 261 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 10 30 - T 14-10-2018 IPR019776 Flagellar basal body rod protein, conserved site PhaeoP54_03516 57cb8b258e26c067080910c47f118b05 261 TIGRFAM TIGR02488 flgG_G_neg: flagellar basal-body rod protein FlgG 3 259 4.8E-99 T 14-10-2018 IPR012834 Flagellar basal-body rod FlgG GO:0009426|GO:0071973 PhaeoP54_03619 8bec214f20cd61e8c457674288cf65d5 203 Gene3D G3DSA:2.60.120.10 88 194 2.8E-14 T 14-10-2018 IPR014710 RmlC-like jelly roll fold PhaeoP54_03619 8bec214f20cd61e8c457674288cf65d5 203 Pfam PF07883 Cupin domain 128 193 7.6E-12 T 14-10-2018 IPR013096 Cupin 2, conserved barrel PhaeoP54_03619 8bec214f20cd61e8c457674288cf65d5 203 Pfam PF01381 Helix-turn-helix 28 81 1.2E-10 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PhaeoP54_03619 8bec214f20cd61e8c457674288cf65d5 203 Gene3D G3DSA:1.10.260.40 6 87 5.4E-15 T 14-10-2018 PhaeoP54_03619 8bec214f20cd61e8c457674288cf65d5 203 SUPERFAMILY SSF47413 21 88 5.07E-15 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 PhaeoP54_03619 8bec214f20cd61e8c457674288cf65d5 203 SUPERFAMILY SSF51182 75 196 1.11E-22 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily PhaeoP54_03619 8bec214f20cd61e8c457674288cf65d5 203 SMART SM00530 27 82 5.0E-11 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PhaeoP54_02239 c684089893795e220501df5127811ed4 504 SUPERFAMILY SSF50156 291 385 5.59E-20 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 PhaeoP54_02239 c684089893795e220501df5127811ed4 504 Gene3D G3DSA:2.30.42.10 405 504 3.4E-15 T 14-10-2018 PhaeoP54_02239 c684089893795e220501df5127811ed4 504 SUPERFAMILY SSF50156 408 501 4.73E-13 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 PhaeoP54_02239 c684089893795e220501df5127811ed4 504 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 53 499 2.5E-139 T 14-10-2018 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 PhaeoP54_02239 c684089893795e220501df5127811ed4 504 Pfam PF13365 Trypsin-like peptidase domain 115 253 1.7E-36 T 14-10-2018 PhaeoP54_02239 c684089893795e220501df5127811ed4 504 Gene3D G3DSA:2.40.10.120 52 286 3.3E-76 T 14-10-2018 PhaeoP54_02239 c684089893795e220501df5127811ed4 504 PRINTS PR00834 HtrA/DegQ protease family signature 224 241 6.3E-51 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 PhaeoP54_02239 c684089893795e220501df5127811ed4 504 PRINTS PR00834 HtrA/DegQ protease family signature 246 263 6.3E-51 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 PhaeoP54_02239 c684089893795e220501df5127811ed4 504 PRINTS PR00834 HtrA/DegQ protease family signature 124 136 6.3E-51 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 PhaeoP54_02239 c684089893795e220501df5127811ed4 504 PRINTS PR00834 HtrA/DegQ protease family signature 150 170 6.3E-51 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 PhaeoP54_02239 c684089893795e220501df5127811ed4 504 PRINTS PR00834 HtrA/DegQ protease family signature 191 215 6.3E-51 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 PhaeoP54_02239 c684089893795e220501df5127811ed4 504 PRINTS PR00834 HtrA/DegQ protease family signature 331 343 6.3E-51 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 PhaeoP54_02239 c684089893795e220501df5127811ed4 504 SMART SM00228 292 373 4.0E-10 T 14-10-2018 IPR001478 PDZ domain GO:0005515 PhaeoP54_02239 c684089893795e220501df5127811ed4 504 SMART SM00228 408 493 1.5E-6 T 14-10-2018 IPR001478 PDZ domain GO:0005515 PhaeoP54_02239 c684089893795e220501df5127811ed4 504 Gene3D G3DSA:2.30.42.10 290 393 2.1E-26 T 14-10-2018 PhaeoP54_02239 c684089893795e220501df5127811ed4 504 Pfam PF13180 PDZ domain 292 382 7.8E-18 T 14-10-2018 IPR001478 PDZ domain GO:0005515 PhaeoP54_02239 c684089893795e220501df5127811ed4 504 Pfam PF13180 PDZ domain 411 493 1.9E-6 T 14-10-2018 IPR001478 PDZ domain GO:0005515 PhaeoP54_02239 c684089893795e220501df5127811ed4 504 SUPERFAMILY SSF50494 29 302 9.17E-63 T 14-10-2018 IPR009003 Peptidase S1, PA clan PhaeoP54_01016 6e438ba1f83e44d86ea358bb82b1c553 672 SUPERFAMILY SSF53706 225 613 4.81E-87 T 14-10-2018 PhaeoP54_01016 6e438ba1f83e44d86ea358bb82b1c553 672 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 6 72 6.9E-11 T 14-10-2018 PhaeoP54_01016 6e438ba1f83e44d86ea358bb82b1c553 672 Gene3D G3DSA:3.30.70.20 141 216 7.4E-6 T 14-10-2018 PhaeoP54_01016 6e438ba1f83e44d86ea358bb82b1c553 672 Pfam PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal 628 656 1.4E-9 T 14-10-2018 IPR015405 NADH-quinone oxidoreductase, chain G, C-terminal GO:0016651|GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PhaeoP54_01016 6e438ba1f83e44d86ea358bb82b1c553 672 TIGRFAM TIGR01973 NuoG: NADH dehydrogenase (quinone), G subunit 7 583 3.3E-196 T 14-10-2018 IPR010228 NADH:ubiquinone oxidoreductase, subunit G GO:0016651|GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PhaeoP54_01016 6e438ba1f83e44d86ea358bb82b1c553 672 ProSitePatterns PS00642 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 2. 110 122 - T 14-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PhaeoP54_01016 6e438ba1f83e44d86ea358bb82b1c553 672 SUPERFAMILY SSF54862 87 223 1.55E-35 T 14-10-2018 PhaeoP54_01016 6e438ba1f83e44d86ea358bb82b1c553 672 SMART SM00929 95 135 1.7E-22 T 14-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PhaeoP54_01016 6e438ba1f83e44d86ea358bb82b1c553 672 Gene3D G3DSA:3.40.50.740 292 350 1.7E-5 T 14-10-2018 PhaeoP54_01016 6e438ba1f83e44d86ea358bb82b1c553 672 Gene3D G3DSA:3.40.50.740 517 619 8.7E-13 T 14-10-2018 PhaeoP54_01016 6e438ba1f83e44d86ea358bb82b1c553 672 ProSitePatterns PS00641 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 1. 34 51 - T 14-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PhaeoP54_01016 6e438ba1f83e44d86ea358bb82b1c553 672 ProSitePatterns PS00643 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 3. 157 167 - T 14-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PhaeoP54_01016 6e438ba1f83e44d86ea358bb82b1c553 672 Gene3D G3DSA:3.40.228.10 351 405 1.7E-5 T 14-10-2018 PhaeoP54_01016 6e438ba1f83e44d86ea358bb82b1c553 672 SUPERFAMILY SSF54292 6 71 2.0E-17 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 PhaeoP54_01016 6e438ba1f83e44d86ea358bb82b1c553 672 Pfam PF00384 Molybdopterin oxidoreductase 442 585 6.2E-26 T 14-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PhaeoP54_01016 6e438ba1f83e44d86ea358bb82b1c553 672 Pfam PF00384 Molybdopterin oxidoreductase 283 431 3.6E-29 T 14-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PhaeoP54_01016 6e438ba1f83e44d86ea358bb82b1c553 672 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 95 134 5.1E-18 T 14-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PhaeoP54_01016 6e438ba1f83e44d86ea358bb82b1c553 672 Gene3D G3DSA:3.10.20.740 4 135 2.7E-34 T 14-10-2018 PhaeoP54_03257 ec21fa0e43773e3937af07b1d90a2aac 148 Gene3D G3DSA:3.30.565.10 2 146 2.1E-23 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PhaeoP54_03257 ec21fa0e43773e3937af07b1d90a2aac 148 SUPERFAMILY SSF55874 35 128 3.54E-9 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PhaeoP54_03257 ec21fa0e43773e3937af07b1d90a2aac 148 Pfam PF13581 Histidine kinase-like ATPase domain 18 137 2.6E-23 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PhaeoP54_02094 ce180df2201102f9dad86fb76bdf85cf 261 Pfam PF13277 YmdB-like protein 1 250 2.8E-97 T 14-10-2018 IPR005235 Metallophosphoesterase, YmdB-like PhaeoP54_02094 ce180df2201102f9dad86fb76bdf85cf 261 SUPERFAMILY SSF56300 1 251 1.63E-76 T 14-10-2018 PhaeoP54_02094 ce180df2201102f9dad86fb76bdf85cf 261 Gene3D G3DSA:3.60.21.10 1 258 2.0E-96 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like PhaeoP54_02094 ce180df2201102f9dad86fb76bdf85cf 261 PIRSF PIRSF004789 1 256 1.4E-84 T 14-10-2018 IPR005235 Metallophosphoesterase, YmdB-like PhaeoP54_01998 62aa4ab097aaf92a077489d7ad877f4a 334 Gene3D G3DSA:3.40.980.10 168 303 1.5E-14 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily PhaeoP54_01998 62aa4ab097aaf92a077489d7ad877f4a 334 SUPERFAMILY SSF53218 180 305 3.93E-18 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily PhaeoP54_01998 62aa4ab097aaf92a077489d7ad877f4a 334 Pfam PF00994 Probable molybdopterin binding domain 181 286 8.5E-6 T 14-10-2018 IPR001453 MoaB/Mog domain PhaeoP54_03477 9fbac610a93fb580b2a05de1e6225f0a 184 SMART SM00448 13 124 7.0E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PhaeoP54_03477 9fbac610a93fb580b2a05de1e6225f0a 184 Pfam PF02954 Bacterial regulatory protein, Fis family 148 176 6.7E-5 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PhaeoP54_03477 9fbac610a93fb580b2a05de1e6225f0a 184 Gene3D G3DSA:3.40.50.2300 13 127 2.8E-28 T 14-10-2018 PhaeoP54_03477 9fbac610a93fb580b2a05de1e6225f0a 184 Gene3D G3DSA:1.10.10.60 128 184 1.1E-24 T 14-10-2018 PhaeoP54_03477 9fbac610a93fb580b2a05de1e6225f0a 184 Pfam PF00072 Response regulator receiver domain 16 124 3.9E-21 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PhaeoP54_03477 9fbac610a93fb580b2a05de1e6225f0a 184 SUPERFAMILY SSF52172 11 170 4.41E-32 T 14-10-2018 IPR011006 CheY-like superfamily PhaeoP54_03284 0e877f05d459088f63c446948a8addd6 507 Pfam PF09898 Uncharacterized protein conserved in bacteria (DUF2125) 258 493 6.7E-9 T 14-10-2018 IPR018666 Protein of unknown function DUF2125 PhaeoP54_01518 e5de7cba2607d3e7e21a77e45fd9e9d1 390 Pfam PF13023 HD domain 18 180 1.1E-38 T 14-10-2018 IPR006674 HD domain PhaeoP54_01518 e5de7cba2607d3e7e21a77e45fd9e9d1 390 Pfam PF13023 HD domain 207 373 7.1E-47 T 14-10-2018 IPR006674 HD domain PhaeoP54_01518 e5de7cba2607d3e7e21a77e45fd9e9d1 390 SMART SM00471 224 345 0.2 T 14-10-2018 IPR003607 HD/PDEase domain PhaeoP54_01518 e5de7cba2607d3e7e21a77e45fd9e9d1 390 SMART SM00471 35 112 4.6 T 14-10-2018 IPR003607 HD/PDEase domain PhaeoP54_01518 e5de7cba2607d3e7e21a77e45fd9e9d1 390 SUPERFAMILY SSF109604 199 378 8.03E-41 T 14-10-2018 PhaeoP54_01518 e5de7cba2607d3e7e21a77e45fd9e9d1 390 SUPERFAMILY SSF109604 4 171 2.32E-34 T 14-10-2018 PhaeoP54_01518 e5de7cba2607d3e7e21a77e45fd9e9d1 390 Gene3D G3DSA:1.10.3210.10 191 387 2.4E-47 T 14-10-2018 PhaeoP54_01518 e5de7cba2607d3e7e21a77e45fd9e9d1 390 Gene3D G3DSA:1.10.3210.10 2 184 6.6E-39 T 14-10-2018 PhaeoP54_02779 3352ae9bb08d0cc6c264a1ae7a6335f5 491 Gene3D G3DSA:3.40.640.10 117 477 1.9E-93 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PhaeoP54_02779 3352ae9bb08d0cc6c264a1ae7a6335f5 491 Pfam PF00155 Aminotransferase class I and II 163 451 2.6E-15 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 PhaeoP54_02779 3352ae9bb08d0cc6c264a1ae7a6335f5 491 SUPERFAMILY SSF46785 11 86 9.4E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_02779 3352ae9bb08d0cc6c264a1ae7a6335f5 491 Pfam PF00392 Bacterial regulatory proteins, gntR family 19 81 8.0E-14 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PhaeoP54_02779 3352ae9bb08d0cc6c264a1ae7a6335f5 491 SMART SM00345 22 81 4.7E-12 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PhaeoP54_02779 3352ae9bb08d0cc6c264a1ae7a6335f5 491 SUPERFAMILY SSF53383 125 484 9.52E-80 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PhaeoP54_02779 3352ae9bb08d0cc6c264a1ae7a6335f5 491 Gene3D G3DSA:1.10.10.10 10 87 3.3E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_03344 7da6f4bcd81d5f965903e1be4a14c5ab 346 Pfam PF00892 EamA-like transporter family 195 325 1.9E-11 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 PhaeoP54_03344 7da6f4bcd81d5f965903e1be4a14c5ab 346 Pfam PF00892 EamA-like transporter family 51 180 9.6E-12 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 PhaeoP54_03344 7da6f4bcd81d5f965903e1be4a14c5ab 346 SUPERFAMILY SSF103481 229 329 2.35E-16 T 14-10-2018 PhaeoP54_03344 7da6f4bcd81d5f965903e1be4a14c5ab 346 SUPERFAMILY SSF103481 81 183 9.29E-14 T 14-10-2018 PhaeoP54_01631 cf1e6bc406d8088e36866c4d95362946 465 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 18 326 3.8E-110 T 14-10-2018 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 PhaeoP54_01631 cf1e6bc406d8088e36866c4d95362946 465 SMART SM00840 350 398 4.6E-5 T 14-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 PhaeoP54_01631 cf1e6bc406d8088e36866c4d95362946 465 Gene3D G3DSA:3.40.50.620 1 320 5.1E-123 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PhaeoP54_01631 cf1e6bc406d8088e36866c4d95362946 465 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 65 74 7.6E-29 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 PhaeoP54_01631 cf1e6bc406d8088e36866c4d95362946 465 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 204 222 7.6E-29 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 PhaeoP54_01631 cf1e6bc406d8088e36866c4d95362946 465 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 27 38 7.6E-29 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 PhaeoP54_01631 cf1e6bc406d8088e36866c4d95362946 465 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 235 256 7.6E-29 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 PhaeoP54_01631 cf1e6bc406d8088e36866c4d95362946 465 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 4 376 2.1E-125 T 14-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 PhaeoP54_01631 cf1e6bc406d8088e36866c4d95362946 465 SUPERFAMILY SSF52374 5 326 2.1E-83 T 14-10-2018 PhaeoP54_01631 cf1e6bc406d8088e36866c4d95362946 465 Pfam PF09190 DALR domain 351 373 1.3E-4 T 14-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 PhaeoP54_01631 cf1e6bc406d8088e36866c4d95362946 465 SUPERFAMILY SSF47323 330 451 4.97E-16 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 PhaeoP54_01631 cf1e6bc406d8088e36866c4d95362946 465 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 4 454 34.767 T 14-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 PhaeoP54_01631 cf1e6bc406d8088e36866c4d95362946 465 Gene3D G3DSA:1.20.120.640 321 452 6.2E-8 T 14-10-2018 PhaeoP54_04060 f297cc5e58ef26012c3bf9725fa59f94 282 TIGRFAM TIGR01214 rmlD: dTDP-4-dehydrorhamnose reductase 2 277 1.9E-88 T 14-10-2018 IPR005913 dTDP-4-dehydrorhamnose reductase family Reactome: R-HSA-156581|Reactome: R-HSA-5689880 PhaeoP54_04060 f297cc5e58ef26012c3bf9725fa59f94 282 Gene3D G3DSA:3.90.25.10 153 272 1.4E-98 T 14-10-2018 PhaeoP54_04060 f297cc5e58ef26012c3bf9725fa59f94 282 Gene3D G3DSA:3.40.50.720 2 265 1.4E-98 T 14-10-2018 PhaeoP54_04060 f297cc5e58ef26012c3bf9725fa59f94 282 Pfam PF04321 RmlD substrate binding domain 2 278 1.9E-98 T 14-10-2018 IPR029903 RmlD-like substrate binding domain Reactome: R-HSA-156581|Reactome: R-HSA-5689880 PhaeoP54_04060 f297cc5e58ef26012c3bf9725fa59f94 282 SUPERFAMILY SSF51735 2 278 1.91E-91 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PhaeoP54_02869 874b4f4f47cd5bf22f02758929d80214 168 Gene3D G3DSA:3.40.1280.10 10 167 1.7E-47 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal PhaeoP54_02869 874b4f4f47cd5bf22f02758929d80214 168 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 13 167 27.143 T 14-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 PhaeoP54_02869 874b4f4f47cd5bf22f02758929d80214 168 PIRSF PIRSF004505 13 167 8.6E-44 T 14-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 PhaeoP54_02869 874b4f4f47cd5bf22f02758929d80214 168 Pfam PF02590 Predicted SPOUT methyltransferase 13 166 1.9E-45 T 14-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 PhaeoP54_02869 874b4f4f47cd5bf22f02758929d80214 168 SUPERFAMILY SSF75217 13 165 6.11E-46 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases PhaeoP54_02770 2bda7d276a736e5d0b7a3557b7743aa6 250 SMART SM00796 10 214 6.1E-42 T 14-10-2018 IPR003833 Carboxyltransferase domain, subdomain C and D PhaeoP54_02770 2bda7d276a736e5d0b7a3557b7743aa6 250 SUPERFAMILY SSF160467 12 104 2.22E-14 T 14-10-2018 PhaeoP54_02770 2bda7d276a736e5d0b7a3557b7743aa6 250 Pfam PF02682 Carboxyltransferase domain, subdomain C and D 12 212 4.9E-45 T 14-10-2018 IPR003833 Carboxyltransferase domain, subdomain C and D PhaeoP54_02770 2bda7d276a736e5d0b7a3557b7743aa6 250 Gene3D G3DSA:2.40.100.10 100 238 8.3E-34 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily PhaeoP54_02770 2bda7d276a736e5d0b7a3557b7743aa6 250 SUPERFAMILY SSF50891 100 230 8.72E-32 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily PhaeoP54_02770 2bda7d276a736e5d0b7a3557b7743aa6 250 Gene3D G3DSA:3.30.1360.40 11 87 1.7E-11 T 14-10-2018 PhaeoP54_02906 3c292519f43d8dc07c7698abf1746e37 536 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 263 318 - T 14-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PhaeoP54_02906 3c292519f43d8dc07c7698abf1746e37 536 SUPERFAMILY SSF81442 68 532 4.19E-115 T 14-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PhaeoP54_02906 3c292519f43d8dc07c7698abf1746e37 536 Gene3D G3DSA:1.20.210.10 58 532 1.1E-184 T 14-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PhaeoP54_02906 3c292519f43d8dc07c7698abf1746e37 536 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 69 503 1.7E-109 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PhaeoP54_02906 3c292519f43d8dc07c7698abf1746e37 536 TIGRFAM TIGR00780 ccoN: cytochrome c oxidase, cbb3-type, subunit I 67 530 2.9E-245 T 14-10-2018 IPR004677 Cytochrome c oxidase cbb3-type, subunit I GO:0004129|GO:0045278|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 PhaeoP54_02948 e13d974182d3b27af86dbe8d9c94628c 320 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 169 182 9.6E-41 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 PhaeoP54_02948 e13d974182d3b27af86dbe8d9c94628c 320 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 88 99 9.6E-41 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 PhaeoP54_02948 e13d974182d3b27af86dbe8d9c94628c 320 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 153 166 9.6E-41 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 PhaeoP54_02948 e13d974182d3b27af86dbe8d9c94628c 320 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 134 150 9.6E-41 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 PhaeoP54_02948 e13d974182d3b27af86dbe8d9c94628c 320 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 197 206 9.6E-41 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 PhaeoP54_02948 e13d974182d3b27af86dbe8d9c94628c 320 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 113 131 9.6E-41 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 PhaeoP54_02948 e13d974182d3b27af86dbe8d9c94628c 320 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 2 315 1.1E-125 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 PhaeoP54_02948 e13d974182d3b27af86dbe8d9c94628c 320 SUPERFAMILY SSF52096 5 314 5.36E-96 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily PhaeoP54_02948 e13d974182d3b27af86dbe8d9c94628c 320 Gene3D G3DSA:3.90.226.10 1 315 8.7E-110 T 14-10-2018 PhaeoP54_02948 e13d974182d3b27af86dbe8d9c94628c 320 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 4 147 9.6E-58 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 PhaeoP54_02948 e13d974182d3b27af86dbe8d9c94628c 320 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 4 316 47.538 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 PhaeoP54_00732 07b083eeb57594d8e43c11ae46d9a7da 580 Pfam PF00512 His Kinase A (phospho-acceptor) domain 202 268 2.0E-15 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PhaeoP54_00732 07b083eeb57594d8e43c11ae46d9a7da 580 SMART SM00388 202 268 1.1E-17 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PhaeoP54_00732 07b083eeb57594d8e43c11ae46d9a7da 580 SMART SM00448 454 568 6.8E-32 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PhaeoP54_00732 07b083eeb57594d8e43c11ae46d9a7da 580 PRINTS PR00344 Bacterial sensor protein C-terminal signature 414 427 2.7E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PhaeoP54_00732 07b083eeb57594d8e43c11ae46d9a7da 580 PRINTS PR00344 Bacterial sensor protein C-terminal signature 373 383 2.7E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PhaeoP54_00732 07b083eeb57594d8e43c11ae46d9a7da 580 PRINTS PR00344 Bacterial sensor protein C-terminal signature 390 408 2.7E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PhaeoP54_00732 07b083eeb57594d8e43c11ae46d9a7da 580 PRINTS PR00344 Bacterial sensor protein C-terminal signature 355 369 2.7E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PhaeoP54_00732 07b083eeb57594d8e43c11ae46d9a7da 580 Gene3D G3DSA:3.30.565.10 267 434 2.8E-43 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PhaeoP54_00732 07b083eeb57594d8e43c11ae46d9a7da 580 Pfam PF00072 Response regulator receiver domain 456 568 2.8E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PhaeoP54_00732 07b083eeb57594d8e43c11ae46d9a7da 580 SMART SM00387 315 430 3.8E-35 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PhaeoP54_00732 07b083eeb57594d8e43c11ae46d9a7da 580 SUPERFAMILY SSF47384 185 269 1.55E-19 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 PhaeoP54_00732 07b083eeb57594d8e43c11ae46d9a7da 580 Gene3D G3DSA:3.40.50.12740 454 580 3.3E-37 T 14-10-2018 PhaeoP54_00732 07b083eeb57594d8e43c11ae46d9a7da 580 SUPERFAMILY SSF52172 453 573 1.85E-34 T 14-10-2018 IPR011006 CheY-like superfamily PhaeoP54_00732 07b083eeb57594d8e43c11ae46d9a7da 580 Gene3D G3DSA:1.10.287.130 180 266 2.8E-22 T 14-10-2018 PhaeoP54_00732 07b083eeb57594d8e43c11ae46d9a7da 580 SUPERFAMILY SSF55874 257 432 2.23E-40 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PhaeoP54_00732 07b083eeb57594d8e43c11ae46d9a7da 580 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 316 427 1.4E-25 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PhaeoP54_00921 f472a44ca1fa06982614948b5a5ee665 595 Pfam PF03717 Penicillin-binding Protein dimerisation domain 90 223 2.9E-16 T 14-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 PhaeoP54_00921 f472a44ca1fa06982614948b5a5ee665 595 SUPERFAMILY SSF56601 235 578 3.64E-85 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like PhaeoP54_00921 f472a44ca1fa06982614948b5a5ee665 595 SUPERFAMILY SSF56519 87 224 1.15E-31 T 14-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 PhaeoP54_00921 f472a44ca1fa06982614948b5a5ee665 595 Gene3D G3DSA:3.40.710.10 303 485 8.4E-88 T 14-10-2018 PhaeoP54_00921 f472a44ca1fa06982614948b5a5ee665 595 Gene3D G3DSA:3.30.450.330 236 572 8.4E-88 T 14-10-2018 PhaeoP54_00921 f472a44ca1fa06982614948b5a5ee665 595 Gene3D G3DSA:3.90.1310.30 85 234 9.6E-26 T 14-10-2018 PhaeoP54_00921 f472a44ca1fa06982614948b5a5ee665 595 Pfam PF00905 Penicillin binding protein transpeptidase domain 262 548 6.1E-60 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 PhaeoP54_02807 a555193a0ee60ae3a834ed1591ac8904 675 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 377 396 1.6E-8 T 14-10-2018 PhaeoP54_02807 a555193a0ee60ae3a834ed1591ac8904 675 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 497 515 1.6E-8 T 14-10-2018 PhaeoP54_02807 a555193a0ee60ae3a834ed1591ac8904 675 Gene3D G3DSA:3.50.50.60 469 628 3.7E-113 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PhaeoP54_02807 a555193a0ee60ae3a834ed1591ac8904 675 Gene3D G3DSA:3.40.50.720 375 669 3.7E-113 T 14-10-2018 PhaeoP54_02807 a555193a0ee60ae3a834ed1591ac8904 675 Gene3D G3DSA:3.20.20.70 3 368 2.9E-116 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PhaeoP54_02807 a555193a0ee60ae3a834ed1591ac8904 675 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 376 647 1.0E-25 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PhaeoP54_02807 a555193a0ee60ae3a834ed1591ac8904 675 SUPERFAMILY SSF51905 460 653 1.97E-26 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PhaeoP54_02807 a555193a0ee60ae3a834ed1591ac8904 675 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 7 330 1.9E-77 T 14-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 PhaeoP54_02807 a555193a0ee60ae3a834ed1591ac8904 675 SUPERFAMILY SSF51395 3 362 3.95E-105 T 14-10-2018 PhaeoP54_02807 a555193a0ee60ae3a834ed1591ac8904 675 SUPERFAMILY SSF51971 333 520 1.29E-42 T 14-10-2018 PhaeoP54_00993 3f149837c47c48e40ef42b13a697ed14 602 SUPERFAMILY SSF53697 244 602 6.12E-102 T 14-10-2018 PhaeoP54_00993 3f149837c47c48e40ef42b13a697ed14 602 Pfam PF13522 Glutamine amidotransferase domain 65 191 1.6E-20 T 14-10-2018 PhaeoP54_00993 3f149837c47c48e40ef42b13a697ed14 602 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 602 4.9E-231 T 14-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 PhaeoP54_00993 3f149837c47c48e40ef42b13a697ed14 602 Gene3D G3DSA:3.40.50.10490 248 601 2.8E-135 T 14-10-2018 PhaeoP54_00993 3f149837c47c48e40ef42b13a697ed14 602 SUPERFAMILY SSF56235 2 232 1.2E-73 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal PhaeoP54_00993 3f149837c47c48e40ef42b13a697ed14 602 Pfam PF01380 SIS domain 286 412 7.2E-28 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 PhaeoP54_00993 3f149837c47c48e40ef42b13a697ed14 602 Pfam PF01380 SIS domain 454 584 1.0E-26 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 PhaeoP54_00993 3f149837c47c48e40ef42b13a697ed14 602 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 602 38.082 T 14-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 PhaeoP54_00993 3f149837c47c48e40ef42b13a697ed14 602 Gene3D G3DSA:3.60.20.10 2 240 3.0E-72 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal PhaeoP54_00993 3f149837c47c48e40ef42b13a697ed14 602 Gene3D G3DSA:3.40.50.10490 439 587 2.8E-135 T 14-10-2018 PhaeoP54_02726 8305ff95cb5868c3847c5abb9442b866 332 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 3 115 2.6E-18 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 PhaeoP54_02726 8305ff95cb5868c3847c5abb9442b866 332 Gene3D G3DSA:3.30.360.10 132 329 1.8E-21 T 14-10-2018 PhaeoP54_02726 8305ff95cb5868c3847c5abb9442b866 332 SUPERFAMILY SSF55347 127 287 9.32E-18 T 14-10-2018 PhaeoP54_02726 8305ff95cb5868c3847c5abb9442b866 332 SUPERFAMILY SSF51735 3 153 2.25E-38 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PhaeoP54_02726 8305ff95cb5868c3847c5abb9442b866 332 Gene3D G3DSA:3.40.50.720 1 131 8.3E-28 T 14-10-2018 PhaeoP54_00297 061461947ae8d6197ba61a6ba88155e3 418 Pfam PF03454 MoeA C-terminal region (domain IV) 355 412 3.2E-13 T 14-10-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 PhaeoP54_00297 061461947ae8d6197ba61a6ba88155e3 418 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 193 329 1.3E-28 T 14-10-2018 IPR001453 MoaB/Mog domain PhaeoP54_00297 061461947ae8d6197ba61a6ba88155e3 418 Pfam PF00994 Probable molybdopterin binding domain 196 331 1.1E-23 T 14-10-2018 IPR001453 MoaB/Mog domain PhaeoP54_00297 061461947ae8d6197ba61a6ba88155e3 418 SUPERFAMILY SSF63882 21 190 7.98E-44 T 14-10-2018 IPR036135 MoeA, N-terminal and linker domain superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 PhaeoP54_00297 061461947ae8d6197ba61a6ba88155e3 418 ProSitePatterns PS01079 Molybdenum cofactor biosynthesis proteins signature 2. 269 302 - T 14-10-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 PhaeoP54_00297 061461947ae8d6197ba61a6ba88155e3 418 Gene3D G3DSA:2.170.190.11 65 157 1.3E-115 T 14-10-2018 PhaeoP54_00297 061461947ae8d6197ba61a6ba88155e3 418 SMART SM00852 196 333 4.6E-38 T 14-10-2018 IPR001453 MoaB/Mog domain PhaeoP54_00297 061461947ae8d6197ba61a6ba88155e3 418 SUPERFAMILY SSF53218 193 336 4.71E-40 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily PhaeoP54_00297 061461947ae8d6197ba61a6ba88155e3 418 SUPERFAMILY SSF63867 344 414 5.89E-16 T 14-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 PhaeoP54_00297 061461947ae8d6197ba61a6ba88155e3 418 Gene3D G3DSA:3.90.105.10 41 190 1.3E-115 T 14-10-2018 PhaeoP54_00297 061461947ae8d6197ba61a6ba88155e3 418 Gene3D G3DSA:3.40.980.10 191 342 1.3E-115 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily PhaeoP54_00297 061461947ae8d6197ba61a6ba88155e3 418 Gene3D G3DSA:2.40.340.10 343 408 1.3E-115 T 14-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 PhaeoP54_00297 061461947ae8d6197ba61a6ba88155e3 418 Pfam PF03453 MoeA N-terminal region (domain I and II) 23 183 6.5E-34 T 14-10-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 PhaeoP54_02659 f0acfc56798bb0755203d84b1d218bb1 182 Pfam PF12915 Protein of unknown function (DUF3833) 22 178 4.1E-51 T 14-10-2018 IPR024409 Protein of unknown function DUF3833 PhaeoP54_01452 9a921c09e0b0479eb5746b27ed243427 182 Pfam PF08534 Redoxin 2 150 8.5E-26 T 14-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 PhaeoP54_01452 9a921c09e0b0479eb5746b27ed243427 182 SUPERFAMILY SSF52833 3 174 4.48E-37 T 14-10-2018 IPR036249 Thioredoxin-like superfamily PhaeoP54_01452 9a921c09e0b0479eb5746b27ed243427 182 Gene3D G3DSA:3.40.30.10 1 176 8.7E-62 T 14-10-2018 PhaeoP54_03568 f529061e6b48b70d88b17dcecb7a5267 207 SUPERFAMILY SSF48008 80 207 1.65E-18 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal PhaeoP54_03568 f529061e6b48b70d88b17dcecb7a5267 207 Pfam PF00392 Bacterial regulatory proteins, gntR family 14 75 2.4E-17 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PhaeoP54_03568 f529061e6b48b70d88b17dcecb7a5267 207 SMART SM00345 17 75 9.1E-15 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PhaeoP54_03568 f529061e6b48b70d88b17dcecb7a5267 207 Gene3D G3DSA:1.10.10.10 9 76 1.1E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_03568 f529061e6b48b70d88b17dcecb7a5267 207 Gene3D G3DSA:1.20.120.530 80 207 1.9E-23 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal PhaeoP54_03568 f529061e6b48b70d88b17dcecb7a5267 207 Pfam PF07729 FCD domain 85 205 4.5E-19 T 14-10-2018 IPR011711 GntR, C-terminal PhaeoP54_03568 f529061e6b48b70d88b17dcecb7a5267 207 SUPERFAMILY SSF46785 11 79 3.89E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_03568 f529061e6b48b70d88b17dcecb7a5267 207 SMART SM00895 85 205 3.1E-15 T 14-10-2018 IPR011711 GntR, C-terminal PhaeoP54_03022 517d33c8ae2fe2b997628fa1e27cfab8 76 PRINTS PR00973 Ribosomal protein S17 family signature 22 45 1.0E-9 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PhaeoP54_03022 517d33c8ae2fe2b997628fa1e27cfab8 76 PRINTS PR00973 Ribosomal protein S17 family signature 64 71 1.0E-9 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PhaeoP54_03022 517d33c8ae2fe2b997628fa1e27cfab8 76 PRINTS PR00973 Ribosomal protein S17 family signature 54 64 1.0E-9 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PhaeoP54_03022 517d33c8ae2fe2b997628fa1e27cfab8 76 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 3 76 21.466 T 14-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PhaeoP54_03022 517d33c8ae2fe2b997628fa1e27cfab8 76 Pfam PF00366 Ribosomal protein S17 8 75 3.5E-28 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PhaeoP54_03022 517d33c8ae2fe2b997628fa1e27cfab8 76 Gene3D G3DSA:2.40.50.140 1 76 6.0E-31 T 14-10-2018 PhaeoP54_03022 517d33c8ae2fe2b997628fa1e27cfab8 76 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 3 73 7.9E-32 T 14-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PhaeoP54_03022 517d33c8ae2fe2b997628fa1e27cfab8 76 SUPERFAMILY SSF50249 3 75 1.97E-27 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold PhaeoP54_03022 517d33c8ae2fe2b997628fa1e27cfab8 76 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 1 74 5.0E-36 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PhaeoP54_03720 4dfeebe4c1f0803156bafac9de5dc1b6 355 Gene3D G3DSA:3.60.15.10 3 213 4.8E-26 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like PhaeoP54_03720 4dfeebe4c1f0803156bafac9de5dc1b6 355 SUPERFAMILY SSF56281 4 330 3.93E-40 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like PhaeoP54_03720 4dfeebe4c1f0803156bafac9de5dc1b6 355 SMART SM00849 14 191 1.4E-8 T 14-10-2018 IPR001279 Metallo-beta-lactamase PhaeoP54_03720 4dfeebe4c1f0803156bafac9de5dc1b6 355 Pfam PF12706 Beta-lactamase superfamily domain 28 175 2.1E-9 T 14-10-2018 IPR001279 Metallo-beta-lactamase PhaeoP54_01502 e7322050cadf9d7d5c55b611bb0fcdfb 495 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 194 491 3.8E-108 T 14-10-2018 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 PhaeoP54_01502 e7322050cadf9d7d5c55b611bb0fcdfb 495 SUPERFAMILY SSF51735 3 195 7.87E-56 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PhaeoP54_01502 e7322050cadf9d7d5c55b611bb0fcdfb 495 Gene3D G3DSA:3.40.50.720 13 440 1.2E-162 T 14-10-2018 PhaeoP54_01502 e7322050cadf9d7d5c55b611bb0fcdfb 495 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 14 192 7.4E-56 T 14-10-2018 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 PhaeoP54_01502 e7322050cadf9d7d5c55b611bb0fcdfb 495 ProSitePatterns PS00069 Glucose-6-phosphate dehydrogenase active site. 182 188 - T 14-10-2018 IPR019796 Glucose-6-phosphate dehydrogenase, active site GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 PhaeoP54_01502 e7322050cadf9d7d5c55b611bb0fcdfb 495 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 10 492 79.114 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 PhaeoP54_01502 e7322050cadf9d7d5c55b611bb0fcdfb 495 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 11 492 3.7E-167 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 PhaeoP54_01502 e7322050cadf9d7d5c55b611bb0fcdfb 495 PIRSF PIRSF000110 1 494 1.1E-160 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 PhaeoP54_01502 e7322050cadf9d7d5c55b611bb0fcdfb 495 Gene3D G3DSA:3.30.360.10 182 480 1.2E-162 T 14-10-2018 PhaeoP54_01502 e7322050cadf9d7d5c55b611bb0fcdfb 495 SUPERFAMILY SSF55347 182 491 2.78E-108 T 14-10-2018 PhaeoP54_01502 e7322050cadf9d7d5c55b611bb0fcdfb 495 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 148 161 6.1E-48 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 PhaeoP54_01502 e7322050cadf9d7d5c55b611bb0fcdfb 495 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 224 241 6.1E-48 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 PhaeoP54_01502 e7322050cadf9d7d5c55b611bb0fcdfb 495 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 242 258 6.1E-48 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 PhaeoP54_01502 e7322050cadf9d7d5c55b611bb0fcdfb 495 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 172 200 6.1E-48 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 PhaeoP54_01502 e7322050cadf9d7d5c55b611bb0fcdfb 495 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 330 356 6.1E-48 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 PhaeoP54_01799 53ef56f7ac397e23a3fe085ce3ad65e3 156 Pfam PF01464 Transglycosylase SLT domain 47 137 3.8E-10 T 14-10-2018 IPR008258 Transglycosylase SLT domain 1 PhaeoP54_01799 53ef56f7ac397e23a3fe085ce3ad65e3 156 SUPERFAMILY SSF53955 33 151 1.52E-22 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily PhaeoP54_01799 53ef56f7ac397e23a3fe085ce3ad65e3 156 Gene3D G3DSA:1.10.530.10 31 152 6.3E-14 T 14-10-2018 PhaeoP54_00754 9e6ba6b8495dd4c2ac59d753d118ac99 552 SUPERFAMILY SSF51445 16 474 7.05E-137 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily PhaeoP54_00754 9e6ba6b8495dd4c2ac59d753d118ac99 552 Gene3D G3DSA:2.60.40.1180 471 543 2.2E-5 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta PhaeoP54_00754 9e6ba6b8495dd4c2ac59d753d118ac99 552 Gene3D G3DSA:3.20.20.80 19 469 1.8E-178 T 14-10-2018 PhaeoP54_00754 9e6ba6b8495dd4c2ac59d753d118ac99 552 Gene3D G3DSA:3.90.400.10 119 189 1.8E-178 T 14-10-2018 PhaeoP54_00754 9e6ba6b8495dd4c2ac59d753d118ac99 552 SMART SM00642 27 415 3.3E-127 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 PhaeoP54_00754 9e6ba6b8495dd4c2ac59d753d118ac99 552 SUPERFAMILY SSF51011 477 549 1.87E-8 T 14-10-2018 PhaeoP54_00754 9e6ba6b8495dd4c2ac59d753d118ac99 552 Pfam PF00128 Alpha amylase, catalytic domain 42 388 1.1E-85 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 PhaeoP54_00754 9e6ba6b8495dd4c2ac59d753d118ac99 552 Pfam PF11941 Domain of unknown function (DUF3459) 461 547 5.4E-8 T 14-10-2018 IPR022567 Glycosyl hydrolase, C-terminal (DUF3459) PhaeoP54_04054 85bb541d6590e8673fb1d64a1c37af25 473 Gene3D G3DSA:3.90.550.10 1 354 3.3E-104 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PhaeoP54_04054 85bb541d6590e8673fb1d64a1c37af25 473 SUPERFAMILY SSF51182 186 472 1.41E-73 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily PhaeoP54_04054 85bb541d6590e8673fb1d64a1c37af25 473 SUPERFAMILY SSF53448 1 281 3.38E-65 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PhaeoP54_04054 85bb541d6590e8673fb1d64a1c37af25 473 TIGRFAM TIGR01479 GMP_PMI: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 2 471 1.5E-174 T 14-10-2018 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase GO:0000271|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882 PhaeoP54_04054 85bb541d6590e8673fb1d64a1c37af25 473 Pfam PF00483 Nucleotidyl transferase 4 282 1.6E-56 T 14-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 PhaeoP54_04054 85bb541d6590e8673fb1d64a1c37af25 473 Pfam PF01050 Mannose-6-phosphate isomerase 318 468 6.2E-62 T 14-10-2018 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal GO:0005976|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882 PhaeoP54_04054 85bb541d6590e8673fb1d64a1c37af25 473 Gene3D G3DSA:2.60.120.10 360 457 1.1E-19 T 14-10-2018 IPR014710 RmlC-like jelly roll fold PhaeoP54_03347 243fd05ca3e87590170a13f0f1a822d3 288 Gene3D G3DSA:3.20.10.10 131 288 1.4E-43 T 14-10-2018 PhaeoP54_03347 243fd05ca3e87590170a13f0f1a822d3 288 Gene3D G3DSA:3.30.470.10 3 130 2.3E-39 T 14-10-2018 PhaeoP54_03347 243fd05ca3e87590170a13f0f1a822d3 288 ProSitePatterns PS00770 Aminotransferases class-IV signature. 191 219 - T 14-10-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 PhaeoP54_03347 243fd05ca3e87590170a13f0f1a822d3 288 Pfam PF01063 Amino-transferase class IV 38 264 5.1E-45 T 14-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 PhaeoP54_03347 243fd05ca3e87590170a13f0f1a822d3 288 SUPERFAMILY SSF56752 5 287 1.96E-86 T 14-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 PhaeoP54_03347 243fd05ca3e87590170a13f0f1a822d3 288 TIGRFAM TIGR01122 ilvE_I: branched-chain amino acid aminotransferase 12 287 1.8E-85 T 14-10-2018 IPR005785 Branched-chain amino acid aminotransferase I GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767 PhaeoP54_03343 d6c4b285ef7e7557510beea57709606a 500 Gene3D G3DSA:3.40.50.12780 10 395 7.8E-132 T 14-10-2018 PhaeoP54_03343 d6c4b285ef7e7557510beea57709606a 500 ProSitePatterns PS00455 Putative AMP-binding domain signature. 160 171 - T 14-10-2018 IPR020845 AMP-binding, conserved site PhaeoP54_03343 d6c4b285ef7e7557510beea57709606a 500 Pfam PF13193 AMP-binding enzyme C-terminal domain 411 485 5.2E-16 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain PhaeoP54_03343 d6c4b285ef7e7557510beea57709606a 500 Gene3D G3DSA:3.30.300.310 398 499 6.8E-31 T 14-10-2018 PhaeoP54_03343 d6c4b285ef7e7557510beea57709606a 500 Pfam PF00501 AMP-binding enzyme 31 402 3.1E-95 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 PhaeoP54_03343 d6c4b285ef7e7557510beea57709606a 500 SUPERFAMILY SSF56801 30 497 5.63E-138 T 14-10-2018 PhaeoP54_00625 b5de6ec75f63ff4307a3882cba69e3b6 331 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 73 88 - T 14-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 PhaeoP54_00625 b5de6ec75f63ff4307a3882cba69e3b6 331 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 107 120 - T 14-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 PhaeoP54_00625 b5de6ec75f63ff4307a3882cba69e3b6 331 SUPERFAMILY SSF51717 66 330 9.29E-99 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 PhaeoP54_00625 b5de6ec75f63ff4307a3882cba69e3b6 331 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 72 329 1.1E-94 T 14-10-2018 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 PhaeoP54_00625 b5de6ec75f63ff4307a3882cba69e3b6 331 Gene3D G3DSA:3.20.20.20 48 331 7.6E-106 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 PhaeoP54_00625 b5de6ec75f63ff4307a3882cba69e3b6 331 Pfam PF00809 Pterin binding enzyme 74 315 1.2E-82 T 14-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 PhaeoP54_00610 e9ec5a42c17a26c18ba155d97b31d352 546 Pfam PF00916 Sulfate permease family 33 393 2.3E-47 T 14-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 PhaeoP54_00610 e9ec5a42c17a26c18ba155d97b31d352 546 SUPERFAMILY SSF52091 434 519 1.12E-10 T 14-10-2018 IPR036513 STAS domain superfamily PhaeoP54_00610 e9ec5a42c17a26c18ba155d97b31d352 546 Gene3D G3DSA:3.30.750.24 426 520 2.3E-27 T 14-10-2018 IPR036513 STAS domain superfamily PhaeoP54_00610 e9ec5a42c17a26c18ba155d97b31d352 546 Pfam PF01740 STAS domain 434 520 7.9E-8 T 14-10-2018 IPR002645 STAS domain PhaeoP54_00251 2a0477e59b7194b1064ebcb9f2bc4e97 290 SUPERFAMILY SSF51182 37 149 1.33E-10 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily PhaeoP54_00251 2a0477e59b7194b1064ebcb9f2bc4e97 290 Pfam PF02311 AraC-like ligand binding domain 34 133 3.6E-6 T 14-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 PhaeoP54_00251 2a0477e59b7194b1064ebcb9f2bc4e97 290 SUPERFAMILY SSF46689 234 283 1.57E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PhaeoP54_00251 2a0477e59b7194b1064ebcb9f2bc4e97 290 SMART SM00342 196 279 2.5E-21 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PhaeoP54_00251 2a0477e59b7194b1064ebcb9f2bc4e97 290 Pfam PF12833 Helix-turn-helix domain 202 281 4.3E-22 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PhaeoP54_00251 2a0477e59b7194b1064ebcb9f2bc4e97 290 Gene3D G3DSA:2.60.120.10 27 126 6.2E-9 T 14-10-2018 IPR014710 RmlC-like jelly roll fold PhaeoP54_00251 2a0477e59b7194b1064ebcb9f2bc4e97 290 Gene3D G3DSA:1.10.10.60 175 283 8.7E-25 T 14-10-2018 PhaeoP54_02749 5111befe03408d43d008f6abbfa2121d 528 Gene3D G3DSA:3.40.190.10 206 512 1.9E-103 T 14-10-2018 PhaeoP54_02749 5111befe03408d43d008f6abbfa2121d 528 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 75 439 5.1E-66 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain PhaeoP54_02749 5111befe03408d43d008f6abbfa2121d 528 PIRSF PIRSF002741 4 523 3.3E-71 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 PhaeoP54_02749 5111befe03408d43d008f6abbfa2121d 528 Gene3D G3DSA:3.10.105.10 284 503 1.9E-103 T 14-10-2018 PhaeoP54_02749 5111befe03408d43d008f6abbfa2121d 528 SUPERFAMILY SSF53850 30 524 4.62E-100 T 14-10-2018 PhaeoP54_02749 5111befe03408d43d008f6abbfa2121d 528 Gene3D G3DSA:3.90.76.10 42 205 1.9E-103 T 14-10-2018 PhaeoP54_00433 593c83fa1ac56676cb5ec5d668eb5737 228 Gene3D G3DSA:1.10.150.240 17 96 5.1E-65 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 PhaeoP54_00433 593c83fa1ac56676cb5ec5d668eb5737 228 Gene3D G3DSA:3.40.50.1000 6 212 5.1E-65 T 14-10-2018 IPR023214 HAD superfamily PhaeoP54_00433 593c83fa1ac56676cb5ec5d668eb5737 228 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 3 14 1.5E-29 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 PhaeoP54_00433 593c83fa1ac56676cb5ec5d668eb5737 228 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 111 124 1.5E-29 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 PhaeoP54_00433 593c83fa1ac56676cb5ec5d668eb5737 228 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 187 200 1.5E-29 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 PhaeoP54_00433 593c83fa1ac56676cb5ec5d668eb5737 228 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 48 61 1.5E-29 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 PhaeoP54_00433 593c83fa1ac56676cb5ec5d668eb5737 228 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 142 158 1.5E-29 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 PhaeoP54_00433 593c83fa1ac56676cb5ec5d668eb5737 228 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 160 180 1.5E-29 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 PhaeoP54_00433 593c83fa1ac56676cb5ec5d668eb5737 228 TIGRFAM TIGR01428 HAD_type_II: haloacid dehalogenase, type II 4 204 5.5E-58 T 14-10-2018 IPR006328 L-2-Haloacid dehalogenase GO:0019120 KEGG: 00361+3.8.1.2|KEGG: 00625+3.8.1.2|MetaCyc: PWY-7425 PhaeoP54_00433 593c83fa1ac56676cb5ec5d668eb5737 228 TIGRFAM TIGR01493 HAD-SF-IA-v2: HAD hydrolase, family IA, variant 2 6 188 1.5E-27 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 PhaeoP54_00433 593c83fa1ac56676cb5ec5d668eb5737 228 SUPERFAMILY SSF56784 1 222 3.28E-58 T 14-10-2018 IPR036412 HAD-like superfamily PhaeoP54_00433 593c83fa1ac56676cb5ec5d668eb5737 228 Pfam PF00702 haloacid dehalogenase-like hydrolase 3 190 7.3E-14 T 14-10-2018 PhaeoP54_00138 311737e4195ddecddb59367f52f9613a 306 Gene3D G3DSA:1.10.3720.10 72 301 4.4E-45 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_00138 311737e4195ddecddb59367f52f9613a 306 SUPERFAMILY SSF161098 18 298 4.97E-48 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_00138 311737e4195ddecddb59367f52f9613a 306 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 146 295 6.8E-14 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PhaeoP54_03068 bb0ef288d53e313b00565d4379365009 276 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 133 161 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 PhaeoP54_03068 bb0ef288d53e313b00565d4379365009 276 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 146 165 1.5E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_03068 bb0ef288d53e313b00565d4379365009 276 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 126 134 1.5E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_03068 bb0ef288d53e313b00565d4379365009 276 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 73 84 1.5E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_03068 bb0ef288d53e313b00565d4379365009 276 Gene3D G3DSA:3.40.50.720 1 265 4.9E-53 T 14-10-2018 PhaeoP54_03068 bb0ef288d53e313b00565d4379365009 276 SUPERFAMILY SSF51735 2 257 5.63E-52 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PhaeoP54_03068 bb0ef288d53e313b00565d4379365009 276 Pfam PF00106 short chain dehydrogenase 3 187 8.3E-38 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_03068 bb0ef288d53e313b00565d4379365009 276 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 4.6E-19 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_03068 bb0ef288d53e313b00565d4379365009 276 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 73 84 4.6E-19 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_03068 bb0ef288d53e313b00565d4379365009 276 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 120 136 4.6E-19 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_03068 bb0ef288d53e313b00565d4379365009 276 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 184 4.6E-19 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_03068 bb0ef288d53e313b00565d4379365009 276 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 146 165 4.6E-19 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_02971 d2fc3d7a323032dadd3aeb02e1a768dc 148 SUPERFAMILY SSF50630 3 135 9.64E-40 T 14-10-2018 IPR021109 Aspartic peptidase domain superfamily PhaeoP54_02971 d2fc3d7a323032dadd3aeb02e1a768dc 148 Gene3D G3DSA:2.40.70.10 1 129 2.9E-34 T 14-10-2018 IPR021109 Aspartic peptidase domain superfamily PhaeoP54_02971 d2fc3d7a323032dadd3aeb02e1a768dc 148 Pfam PF05618 Putative ATP-dependant zinc protease 3 136 3.2E-31 T 14-10-2018 PhaeoP54_00021 ec78ada194d7688f6c4027a7362e60d8 373 Pfam PF00557 Metallopeptidase family M24 144 352 1.1E-33 T 14-10-2018 IPR000994 Peptidase M24 PhaeoP54_00021 ec78ada194d7688f6c4027a7362e60d8 373 Pfam PF01321 Creatinase/Prolidase N-terminal domain 7 114 3.5E-15 T 14-10-2018 IPR000587 Creatinase, N-terminal GO:0016787 PhaeoP54_00021 ec78ada194d7688f6c4027a7362e60d8 373 Gene3D G3DSA:3.90.230.10 135 370 1.0E-52 T 14-10-2018 PhaeoP54_00021 ec78ada194d7688f6c4027a7362e60d8 373 SUPERFAMILY SSF53092 3 111 3.49E-22 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal PhaeoP54_00021 ec78ada194d7688f6c4027a7362e60d8 373 Gene3D G3DSA:3.40.350.10 2 134 5.7E-25 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal PhaeoP54_00021 ec78ada194d7688f6c4027a7362e60d8 373 SUPERFAMILY SSF55920 135 366 4.84E-51 T 14-10-2018 IPR036005 Creatinase/aminopeptidase-like PhaeoP54_02005 5fa26b0715fef4a861f1be7d43fa3b4a 296 PRINTS PR00111 Alpha/beta hydrolase fold signature 82 95 2.1E-9 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 PhaeoP54_02005 5fa26b0715fef4a861f1be7d43fa3b4a 296 PRINTS PR00111 Alpha/beta hydrolase fold signature 96 109 2.1E-9 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 PhaeoP54_02005 5fa26b0715fef4a861f1be7d43fa3b4a 296 PRINTS PR00111 Alpha/beta hydrolase fold signature 198 212 2.1E-9 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 PhaeoP54_02005 5fa26b0715fef4a861f1be7d43fa3b4a 296 Gene3D G3DSA:3.40.50.1820 10 262 8.1E-42 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold PhaeoP54_02005 5fa26b0715fef4a861f1be7d43fa3b4a 296 Pfam PF12697 Alpha/beta hydrolase family 38 244 1.9E-14 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 PhaeoP54_02005 5fa26b0715fef4a861f1be7d43fa3b4a 296 SUPERFAMILY SSF53474 12 253 1.49E-46 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold PhaeoP54_02198 aac194c3e4f50322f9987343de896f9d 266 SUPERFAMILY SSF56655 14 265 4.58E-66 T 14-10-2018 PhaeoP54_02198 aac194c3e4f50322f9987343de896f9d 266 Pfam PF00459 Inositol monophosphatase family 46 263 5.9E-46 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 PhaeoP54_02198 aac194c3e4f50322f9987343de896f9d 266 Gene3D G3DSA:3.30.540.10 2 147 3.5E-33 T 14-10-2018 PhaeoP54_02198 aac194c3e4f50322f9987343de896f9d 266 Gene3D G3DSA:3.40.190.80 151 266 5.6E-27 T 14-10-2018 PhaeoP54_02198 aac194c3e4f50322f9987343de896f9d 266 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 90 103 - T 14-10-2018 IPR020583 Inositol monophosphatase, metal-binding site PhaeoP54_02198 aac194c3e4f50322f9987343de896f9d 266 PRINTS PR00377 Inositol monophosphatase superfamily signature 182 203 8.6E-26 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 PhaeoP54_02198 aac194c3e4f50322f9987343de896f9d 266 PRINTS PR00377 Inositol monophosphatase superfamily signature 70 86 8.6E-26 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 PhaeoP54_02198 aac194c3e4f50322f9987343de896f9d 266 PRINTS PR00377 Inositol monophosphatase superfamily signature 213 237 8.6E-26 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 PhaeoP54_02198 aac194c3e4f50322f9987343de896f9d 266 PRINTS PR00377 Inositol monophosphatase superfamily signature 139 162 8.6E-26 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 PhaeoP54_02198 aac194c3e4f50322f9987343de896f9d 266 PRINTS PR00377 Inositol monophosphatase superfamily signature 48 68 8.6E-26 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 PhaeoP54_02198 aac194c3e4f50322f9987343de896f9d 266 PRINTS PR00377 Inositol monophosphatase superfamily signature 90 106 8.6E-26 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 PhaeoP54_01990 cd006bf3df565c8119b071b4b0782ee6 430 Gene3D G3DSA:1.20.1250.20 16 215 3.5E-18 T 14-10-2018 PhaeoP54_01990 cd006bf3df565c8119b071b4b0782ee6 430 SUPERFAMILY SSF103473 17 424 7.72E-43 T 14-10-2018 IPR036259 MFS transporter superfamily PhaeoP54_01990 cd006bf3df565c8119b071b4b0782ee6 430 Pfam PF07690 Major Facilitator Superfamily 275 421 2.4E-12 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PhaeoP54_01990 cd006bf3df565c8119b071b4b0782ee6 430 Pfam PF07690 Major Facilitator Superfamily 27 269 7.5E-19 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PhaeoP54_01990 cd006bf3df565c8119b071b4b0782ee6 430 Gene3D G3DSA:1.20.1250.20 237 428 6.6E-18 T 14-10-2018 PhaeoP54_01443 311d36f87dabbf1f055911992713b854 305 Gene3D G3DSA:3.40.50.880 1 300 1.3E-121 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like PhaeoP54_01443 311d36f87dabbf1f055911992713b854 305 TIGRFAM TIGR01001 metA: homoserine O-succinyltransferase 1 300 3.3E-110 T 14-10-2018 IPR005697 Homoserine O-succinyltransferase MetA GO:0005737|GO:0008899|GO:0019281 PhaeoP54_01443 311d36f87dabbf1f055911992713b854 305 PIRSF PIRSF000450 1 305 8.1E-135 T 14-10-2018 IPR033752 MetA family PhaeoP54_01443 311d36f87dabbf1f055911992713b854 305 SUPERFAMILY SSF52317 17 296 4.58E-104 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like PhaeoP54_01443 311d36f87dabbf1f055911992713b854 305 Pfam PF04204 Homoserine O-succinyltransferase 2 298 1.0E-130 T 14-10-2018 IPR033752 MetA family PhaeoP54_01443 311d36f87dabbf1f055911992713b854 305 Hamap MF_00295 Homoserine O-succinyltransferase [metAS]. 31 298 40.219 T 14-10-2018 IPR033752 MetA family PhaeoP54_01443 311d36f87dabbf1f055911992713b854 305 ProDom PD037892 HOMOSERINE O-SUCCINYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIOSYNTHESIS TRANSSUCCINYLASE HTS METHIONINE O- AMINO-ACID 36 292 2.0E-136 T 14-10-2018 PhaeoP54_00091 e83e935f1cb609ae6691118205c3e662 684 Pfam PF00990 Diguanylate cyclase, GGDEF domain 254 408 8.5E-39 T 14-10-2018 IPR000160 GGDEF domain PhaeoP54_00091 e83e935f1cb609ae6691118205c3e662 684 SUPERFAMILY SSF55073 259 417 5.41E-37 T 14-10-2018 IPR029787 Nucleotide cyclase PhaeoP54_00091 e83e935f1cb609ae6691118205c3e662 684 Pfam PF00563 EAL domain 433 664 1.9E-70 T 14-10-2018 IPR001633 EAL domain PhaeoP54_00091 e83e935f1cb609ae6691118205c3e662 684 SMART SM00052 426 669 5.5E-98 T 14-10-2018 IPR001633 EAL domain PhaeoP54_00091 e83e935f1cb609ae6691118205c3e662 684 SUPERFAMILY SSF141868 438 676 1.44E-83 T 14-10-2018 IPR035919 EAL domain superfamily PhaeoP54_00091 e83e935f1cb609ae6691118205c3e662 684 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 250 413 2.0E-37 T 14-10-2018 IPR000160 GGDEF domain PhaeoP54_00091 e83e935f1cb609ae6691118205c3e662 684 SMART SM00267 243 416 1.2E-41 T 14-10-2018 IPR000160 GGDEF domain PhaeoP54_00091 e83e935f1cb609ae6691118205c3e662 684 Gene3D G3DSA:3.30.70.270 248 428 3.9E-46 T 14-10-2018 PhaeoP54_00091 e83e935f1cb609ae6691118205c3e662 684 Gene3D G3DSA:3.20.20.450 429 684 2.6E-90 T 14-10-2018 IPR035919 EAL domain superfamily PhaeoP54_00091 e83e935f1cb609ae6691118205c3e662 684 Pfam PF03707 Bacterial signalling protein N terminal repeat 121 175 5.7E-6 T 14-10-2018 IPR005330 MHYT domain PhaeoP54_00091 e83e935f1cb609ae6691118205c3e662 684 Pfam PF03707 Bacterial signalling protein N terminal repeat 185 246 2.2E-6 T 14-10-2018 IPR005330 MHYT domain PhaeoP54_00091 e83e935f1cb609ae6691118205c3e662 684 Pfam PF03707 Bacterial signalling protein N terminal repeat 58 98 1.8E-8 T 14-10-2018 IPR005330 MHYT domain PhaeoP54_00955 7a6bc570797d5edd4e59980e54ee67fb 788 Gene3D G3DSA:1.10.150.310 497 628 1.0E-48 T 14-10-2018 PhaeoP54_00955 7a6bc570797d5edd4e59980e54ee67fb 788 Pfam PF09371 Tex-like protein N-terminal domain 11 193 3.0E-65 T 14-10-2018 IPR018974 Tex-like protein, N-terminal PhaeoP54_00955 7a6bc570797d5edd4e59980e54ee67fb 788 Pfam PF16921 Tex protein YqgF-like domain 323 449 6.1E-51 T 14-10-2018 IPR032639 Tex protein, YqgF-like domain PhaeoP54_00955 7a6bc570797d5edd4e59980e54ee67fb 788 SUPERFAMILY SSF47781 558 629 1.11E-19 T 14-10-2018 IPR010994 RuvA domain 2-like PhaeoP54_00955 7a6bc570797d5edd4e59980e54ee67fb 788 SUPERFAMILY SSF53098 317 467 9.86E-47 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily PhaeoP54_00955 7a6bc570797d5edd4e59980e54ee67fb 788 Gene3D G3DSA:1.10.3500.10 114 496 3.5E-140 T 14-10-2018 IPR023323 Tex-like domain superfamily PhaeoP54_00955 7a6bc570797d5edd4e59980e54ee67fb 788 SMART SM00316 647 718 1.4E-26 T 14-10-2018 IPR022967 RNA-binding domain, S1 PhaeoP54_00955 7a6bc570797d5edd4e59980e54ee67fb 788 Gene3D G3DSA:1.10.10.650 3 111 6.3E-39 T 14-10-2018 IPR023319 Tex-like protein, HTH domain superfamily PhaeoP54_00955 7a6bc570797d5edd4e59980e54ee67fb 788 Pfam PF12836 Helix-hairpin-helix motif 489 553 9.1E-28 T 14-10-2018 PhaeoP54_00955 7a6bc570797d5edd4e59980e54ee67fb 788 SUPERFAMILY SSF47781 468 556 1.22E-26 T 14-10-2018 IPR010994 RuvA domain 2-like PhaeoP54_00955 7a6bc570797d5edd4e59980e54ee67fb 788 SUPERFAMILY SSF50249 635 724 2.09E-25 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold PhaeoP54_00955 7a6bc570797d5edd4e59980e54ee67fb 788 SUPERFAMILY SSF158832 6 316 1.96E-107 T 14-10-2018 PhaeoP54_00955 7a6bc570797d5edd4e59980e54ee67fb 788 SMART SM00732 321 422 1.9E-31 T 14-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 PhaeoP54_00955 7a6bc570797d5edd4e59980e54ee67fb 788 Gene3D G3DSA:3.30.420.140 320 449 3.5E-140 T 14-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 PhaeoP54_00955 7a6bc570797d5edd4e59980e54ee67fb 788 Gene3D G3DSA:2.40.50.140 629 722 3.2E-28 T 14-10-2018 PhaeoP54_00955 7a6bc570797d5edd4e59980e54ee67fb 788 Pfam PF00575 S1 RNA binding domain 647 718 3.4E-20 T 14-10-2018 IPR003029 S1 domain GO:0003676 PhaeoP54_00677 922fcd5fc8f5b047ebc0d317879a58ea 151 SUPERFAMILY SSF54909 62 148 1.01E-19 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel PhaeoP54_00677 922fcd5fc8f5b047ebc0d317879a58ea 151 Gene3D G3DSA:3.30.70.920 55 137 2.8E-27 T 14-10-2018 PhaeoP54_00677 922fcd5fc8f5b047ebc0d317879a58ea 151 SUPERFAMILY SSF46785 1 60 2.34E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_00677 922fcd5fc8f5b047ebc0d317879a58ea 151 Pfam PF01037 Lrp/AsnC ligand binding domain 67 137 8.0E-22 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain PhaeoP54_00677 922fcd5fc8f5b047ebc0d317879a58ea 151 Gene3D G3DSA:1.10.10.10 1 54 8.5E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_00677 922fcd5fc8f5b047ebc0d317879a58ea 151 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 1 17 5.6E-14 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 PhaeoP54_00677 922fcd5fc8f5b047ebc0d317879a58ea 151 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 17 28 5.6E-14 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 PhaeoP54_00677 922fcd5fc8f5b047ebc0d317879a58ea 151 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 47 5.6E-14 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 PhaeoP54_00677 922fcd5fc8f5b047ebc0d317879a58ea 151 SMART SM00344 1 110 4.0E-46 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 PhaeoP54_00677 922fcd5fc8f5b047ebc0d317879a58ea 151 Pfam PF13412 Winged helix-turn-helix DNA-binding 1 48 5.8E-17 T 14-10-2018 PhaeoP54_00842 adf2a31bcdc8aacf3dff4a937fd1f458 476 SMART SM00839 188 475 1.4E-84 T 14-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 PhaeoP54_00842 adf2a31bcdc8aacf3dff4a937fd1f458 476 SUPERFAMILY SSF51735 190 476 1.74E-68 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PhaeoP54_00842 adf2a31bcdc8aacf3dff4a937fd1f458 476 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 356 367 4.0E-31 T 14-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 PhaeoP54_00842 adf2a31bcdc8aacf3dff4a937fd1f458 476 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 93 107 4.0E-31 T 14-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 PhaeoP54_00842 adf2a31bcdc8aacf3dff4a937fd1f458 476 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 227 247 4.0E-31 T 14-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 PhaeoP54_00842 adf2a31bcdc8aacf3dff4a937fd1f458 476 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 177 199 4.0E-31 T 14-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 PhaeoP54_00842 adf2a31bcdc8aacf3dff4a937fd1f458 476 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 186 379 5.7E-52 T 14-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 PhaeoP54_00842 adf2a31bcdc8aacf3dff4a937fd1f458 476 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 41 165 2.0E-49 T 14-10-2018 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 PhaeoP54_00842 adf2a31bcdc8aacf3dff4a937fd1f458 476 Gene3D G3DSA:3.40.50.10860 40 185 9.2E-55 T 14-10-2018 PhaeoP54_00842 adf2a31bcdc8aacf3dff4a937fd1f458 476 PIRSF PIRSF000185 3 476 5.1E-145 T 14-10-2018 IPR014362 Glutamate dehydrogenase GO:0016639|GO:0055114 PhaeoP54_00842 adf2a31bcdc8aacf3dff4a937fd1f458 476 Gene3D G3DSA:3.40.50.720 186 476 1.3E-91 T 14-10-2018 PhaeoP54_00842 adf2a31bcdc8aacf3dff4a937fd1f458 476 SUPERFAMILY SSF53223 6 188 1.02E-54 T 14-10-2018 PhaeoP54_02087 f1fc5cb9303f6a17a1a90b7a0a7f854e 294 Pfam PF03466 LysR substrate binding domain 91 279 2.2E-15 T 14-10-2018 IPR005119 LysR, substrate-binding PhaeoP54_02087 f1fc5cb9303f6a17a1a90b7a0a7f854e 294 SUPERFAMILY SSF53850 91 279 1.03E-20 T 14-10-2018 PhaeoP54_02087 f1fc5cb9303f6a17a1a90b7a0a7f854e 294 TIGRFAM TIGR03298 argP: transcriptional regulator, ArgP family 3 290 3.1E-108 T 14-10-2018 IPR017685 HTH-type transcriptional regulator ArgP PhaeoP54_02087 f1fc5cb9303f6a17a1a90b7a0a7f854e 294 Gene3D G3DSA:1.10.10.10 1 84 4.0E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_02087 f1fc5cb9303f6a17a1a90b7a0a7f854e 294 SUPERFAMILY SSF46785 1 111 1.31E-15 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_02087 f1fc5cb9303f6a17a1a90b7a0a7f854e 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 62 5.3E-14 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PhaeoP54_02087 f1fc5cb9303f6a17a1a90b7a0a7f854e 294 Gene3D G3DSA:3.40.190.290 90 291 3.5E-73 T 14-10-2018 PhaeoP54_03664 62e9f053de36be169abcb6d5b7f5ef41 375 PIRSF PIRSF005962 2 375 4.4E-113 T 14-10-2018 IPR017439 Amidohydrolase GO:0016787 PhaeoP54_03664 62e9f053de36be169abcb6d5b7f5ef41 375 SUPERFAMILY SSF53187 5 373 2.11E-77 T 14-10-2018 PhaeoP54_03664 62e9f053de36be169abcb6d5b7f5ef41 375 Gene3D G3DSA:3.30.70.360 173 287 2.7E-121 T 14-10-2018 PhaeoP54_03664 62e9f053de36be169abcb6d5b7f5ef41 375 SUPERFAMILY SSF55031 176 282 1.19E-25 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain PhaeoP54_03664 62e9f053de36be169abcb6d5b7f5ef41 375 Pfam PF01546 Peptidase family M20/M25/M40 64 373 8.6E-30 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 PhaeoP54_03664 62e9f053de36be169abcb6d5b7f5ef41 375 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 7 363 4.9E-93 T 14-10-2018 IPR017439 Amidohydrolase GO:0016787 PhaeoP54_03664 62e9f053de36be169abcb6d5b7f5ef41 375 Pfam PF07687 Peptidase dimerisation domain 178 269 1.6E-6 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain PhaeoP54_03664 62e9f053de36be169abcb6d5b7f5ef41 375 Gene3D G3DSA:3.40.630.10 6 361 2.7E-121 T 14-10-2018 PhaeoP54_01786 c7e1f72d1499c6ca9d9c4ca448a05cfb 77 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 1 75 6.5E-33 T 14-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 PhaeoP54_01786 c7e1f72d1499c6ca9d9c4ca448a05cfb 77 Pfam PF00550 Phosphopantetheine attachment site 6 73 2.7E-14 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain PhaeoP54_01786 c7e1f72d1499c6ca9d9c4ca448a05cfb 77 Hamap MF_01217 Acyl carrier protein [acpP]. 3 77 22.317 T 14-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 PhaeoP54_01786 c7e1f72d1499c6ca9d9c4ca448a05cfb 77 SUPERFAMILY SSF47336 2 75 7.72E-23 T 14-10-2018 IPR036736 ACP-like superfamily PhaeoP54_01786 c7e1f72d1499c6ca9d9c4ca448a05cfb 77 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 34 75 4.0E-16 T 14-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 PhaeoP54_01786 c7e1f72d1499c6ca9d9c4ca448a05cfb 77 Gene3D G3DSA:1.10.1200.10 1 76 6.0E-29 T 14-10-2018 IPR036736 ACP-like superfamily PhaeoP54_01786 c7e1f72d1499c6ca9d9c4ca448a05cfb 77 ProSitePatterns PS00012 Phosphopantetheine attachment site. 32 47 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site PhaeoP54_02480 79ddcfd22f886911daa6e33098c28997 621 SUPERFAMILY SSF58104 283 564 1.14E-68 T 14-10-2018 PhaeoP54_02480 79ddcfd22f886911daa6e33098c28997 621 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 377 531 1.1E-49 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 PhaeoP54_02480 79ddcfd22f886911daa6e33098c28997 621 SMART SM00304 263 315 2.1 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 PhaeoP54_02480 79ddcfd22f886911daa6e33098c28997 621 SMART SM00304 200 253 5.3E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 PhaeoP54_02480 79ddcfd22f886911daa6e33098c28997 621 SUPERFAMILY SSF158472 201 249 2.48E-8 T 14-10-2018 PhaeoP54_02480 79ddcfd22f886911daa6e33098c28997 621 Gene3D G3DSA:1.10.287.950 266 565 1.3E-77 T 14-10-2018 PhaeoP54_02480 79ddcfd22f886911daa6e33098c28997 621 Pfam PF00672 HAMP domain 202 248 5.3E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 PhaeoP54_02480 79ddcfd22f886911daa6e33098c28997 621 SMART SM00283 316 563 5.5E-94 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 PhaeoP54_02480 79ddcfd22f886911daa6e33098c28997 621 Gene3D G3DSA:1.20.1480.50 168 258 3.8E-14 T 14-10-2018 PhaeoP54_01111 bc7739be0edce16b102a46665bbf2f07 418 Gene3D G3DSA:3.10.290.10 333 398 2.5E-17 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 PhaeoP54_01111 bc7739be0edce16b102a46665bbf2f07 418 SUPERFAMILY SSF52374 8 329 4.13E-93 T 14-10-2018 PhaeoP54_01111 bc7739be0edce16b102a46665bbf2f07 418 Hamap MF_02006 Tyrosine--tRNA ligase [tyrS]. 7 416 42.343 T 14-10-2018 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 GO:0004831 KEGG: 00970+6.1.1.1 PhaeoP54_01111 bc7739be0edce16b102a46665bbf2f07 418 Gene3D G3DSA:3.40.50.620 1 230 1.1E-84 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PhaeoP54_01111 bc7739be0edce16b102a46665bbf2f07 418 Pfam PF00579 tRNA synthetases class I (W and Y) 38 330 3.0E-75 T 14-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 PhaeoP54_01111 bc7739be0edce16b102a46665bbf2f07 418 Gene3D G3DSA:1.10.240.10 231 332 1.2E-32 T 14-10-2018 PhaeoP54_01111 bc7739be0edce16b102a46665bbf2f07 418 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 191 213 7.3E-27 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 PhaeoP54_01111 bc7739be0edce16b102a46665bbf2f07 418 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 224 236 7.3E-27 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 PhaeoP54_01111 bc7739be0edce16b102a46665bbf2f07 418 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 49 71 7.3E-27 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 PhaeoP54_01111 bc7739be0edce16b102a46665bbf2f07 418 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 170 185 7.3E-27 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 PhaeoP54_01111 bc7739be0edce16b102a46665bbf2f07 418 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 15 415 1.4E-105 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 PhaeoP54_01111 bc7739be0edce16b102a46665bbf2f07 418 SUPERFAMILY SSF55174 320 415 4.71E-13 T 14-10-2018 PhaeoP54_01959 4c611fecb35aec48f42b565a00419683 345 SUPERFAMILY SSF53335 158 319 2.11E-27 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PhaeoP54_01959 4c611fecb35aec48f42b565a00419683 345 SUPERFAMILY SSF55729 38 159 3.42E-15 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase PhaeoP54_01959 4c611fecb35aec48f42b565a00419683 345 Gene3D G3DSA:3.40.50.150 176 341 1.1E-28 T 14-10-2018 PhaeoP54_01959 4c611fecb35aec48f42b565a00419683 345 Pfam PF13302 Acetyltransferase (GNAT) domain 40 157 4.2E-12 T 14-10-2018 IPR000182 GNAT domain PhaeoP54_01959 4c611fecb35aec48f42b565a00419683 345 Pfam PF13649 Methyltransferase domain 210 303 3.8E-15 T 14-10-2018 PhaeoP54_01959 4c611fecb35aec48f42b565a00419683 345 Gene3D G3DSA:3.40.630.30 3 175 2.4E-21 T 14-10-2018 PhaeoP54_01512 8c249ac8d2a12efb71a4e70934b2bf44 355 SUPERFAMILY SSF52540 14 279 1.43E-63 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_01512 8c249ac8d2a12efb71a4e70934b2bf44 355 Gene3D G3DSA:3.30.250.10 280 355 8.2E-26 T 14-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal PhaeoP54_01512 8c249ac8d2a12efb71a4e70934b2bf44 355 Hamap MF_00268 Protein RecA [recA]. 16 341 51.256 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 PhaeoP54_01512 8c249ac8d2a12efb71a4e70934b2bf44 355 PRINTS PR00142 RecA protein signature 105 134 1.6E-84 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 PhaeoP54_01512 8c249ac8d2a12efb71a4e70934b2bf44 355 PRINTS PR00142 RecA protein signature 139 168 1.6E-84 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 PhaeoP54_01512 8c249ac8d2a12efb71a4e70934b2bf44 355 PRINTS PR00142 RecA protein signature 177 206 1.6E-84 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 PhaeoP54_01512 8c249ac8d2a12efb71a4e70934b2bf44 355 PRINTS PR00142 RecA protein signature 222 250 1.6E-84 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 PhaeoP54_01512 8c249ac8d2a12efb71a4e70934b2bf44 355 PRINTS PR00142 RecA protein signature 255 284 1.6E-84 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 PhaeoP54_01512 8c249ac8d2a12efb71a4e70934b2bf44 355 PRINTS PR00142 RecA protein signature 309 326 1.6E-84 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 PhaeoP54_01512 8c249ac8d2a12efb71a4e70934b2bf44 355 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 15 335 4.7E-170 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 PhaeoP54_01512 8c249ac8d2a12efb71a4e70934b2bf44 355 Pfam PF00154 recA bacterial DNA recombination protein 18 280 2.8E-145 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 PhaeoP54_01512 8c249ac8d2a12efb71a4e70934b2bf44 355 SUPERFAMILY SSF54752 280 338 7.19E-21 T 14-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal PhaeoP54_01512 8c249ac8d2a12efb71a4e70934b2bf44 355 SMART SM00382 69 240 2.7E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_01512 8c249ac8d2a12efb71a4e70934b2bf44 355 ProSitePatterns PS00321 recA signature. 225 233 - T 14-10-2018 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 PhaeoP54_01512 8c249ac8d2a12efb71a4e70934b2bf44 355 Gene3D G3DSA:3.40.50.300 43 279 1.5E-80 T 14-10-2018 PhaeoP54_01931 0d5ce586a041e538c14950aba973f3ab 214 SUPERFAMILY SSF52172 4 128 8.54E-35 T 14-10-2018 IPR011006 CheY-like superfamily PhaeoP54_01931 0d5ce586a041e538c14950aba973f3ab 214 Pfam PF00196 Bacterial regulatory proteins, luxR family 146 201 3.7E-18 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PhaeoP54_01931 0d5ce586a041e538c14950aba973f3ab 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 177 189 2.3E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PhaeoP54_01931 0d5ce586a041e538c14950aba973f3ab 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 161 177 2.3E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PhaeoP54_01931 0d5ce586a041e538c14950aba973f3ab 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 147 161 2.3E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PhaeoP54_01931 0d5ce586a041e538c14950aba973f3ab 214 Gene3D G3DSA:3.40.50.12740 5 207 4.9E-64 T 14-10-2018 PhaeoP54_01931 0d5ce586a041e538c14950aba973f3ab 214 SMART SM00421 144 201 3.6E-21 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PhaeoP54_01931 0d5ce586a041e538c14950aba973f3ab 214 ProSitePatterns PS00622 LuxR-type HTH domain signature. 161 188 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PhaeoP54_01931 0d5ce586a041e538c14950aba973f3ab 214 SMART SM00448 5 118 4.8E-32 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PhaeoP54_01931 0d5ce586a041e538c14950aba973f3ab 214 SUPERFAMILY SSF46894 143 207 1.9E-20 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PhaeoP54_01931 0d5ce586a041e538c14950aba973f3ab 214 Pfam PF00072 Response regulator receiver domain 7 118 3.2E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PhaeoP54_00708 2d6cd164fa238f1e590c86a5da8d5c20 353 SUPERFAMILY SSF52540 6 242 6.47E-85 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_00708 2d6cd164fa238f1e590c86a5da8d5c20 353 Pfam PF08402 TOBE domain 276 344 4.2E-5 T 14-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 PhaeoP54_00708 2d6cd164fa238f1e590c86a5da8d5c20 353 Gene3D G3DSA:2.40.50.940 222 345 8.4E-24 T 14-10-2018 PhaeoP54_00708 2d6cd164fa238f1e590c86a5da8d5c20 353 SMART SM00382 28 211 6.6E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_00708 2d6cd164fa238f1e590c86a5da8d5c20 353 SUPERFAMILY SSF50331 236 352 2.67E-20 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal PhaeoP54_00708 2d6cd164fa238f1e590c86a5da8d5c20 353 Gene3D G3DSA:3.40.50.300 4 221 1.0E-64 T 14-10-2018 PhaeoP54_00708 2d6cd164fa238f1e590c86a5da8d5c20 353 Pfam PF00005 ABC transporter 20 161 8.3E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PhaeoP54_00708 2d6cd164fa238f1e590c86a5da8d5c20 353 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PhaeoP54_00708 2d6cd164fa238f1e590c86a5da8d5c20 353 Gene3D G3DSA:2.40.50.140 283 336 8.4E-24 T 14-10-2018 PhaeoP54_02341 636450381d14f71e8e664922f0ab8c6e 1119 SUPERFAMILY SSF56059 128 413 1.17E-97 T 14-10-2018 PhaeoP54_02341 636450381d14f71e8e664922f0ab8c6e 1119 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1103 0.0 T 14-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 PhaeoP54_02341 636450381d14f71e8e664922f0ab8c6e 1119 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 867 874 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 PhaeoP54_02341 636450381d14f71e8e664922f0ab8c6e 1119 Gene3D G3DSA:3.40.50.20 1 116 2.8E-48 T 14-10-2018 PhaeoP54_02341 636450381d14f71e8e664922f0ab8c6e 1119 Gene3D G3DSA:3.40.50.1380 986 1119 1.8E-34 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily PhaeoP54_02341 636450381d14f71e8e664922f0ab8c6e 1119 SMART SM00851 1006 1092 3.2E-29 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain PhaeoP54_02341 636450381d14f71e8e664922f0ab8c6e 1119 SUPERFAMILY SSF56059 697 983 8.31E-95 T 14-10-2018 PhaeoP54_02341 636450381d14f71e8e664922f0ab8c6e 1119 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 733 747 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 PhaeoP54_02341 636450381d14f71e8e664922f0ab8c6e 1119 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 161 347 1.6E-63 T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 PhaeoP54_02341 636450381d14f71e8e664922f0ab8c6e 1119 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 697 903 3.7E-30 T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 PhaeoP54_02341 636450381d14f71e8e664922f0ab8c6e 1119 SUPERFAMILY SSF52440 1 127 1.24E-48 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily PhaeoP54_02341 636450381d14f71e8e664922f0ab8c6e 1119 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 7.9E-64 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 PhaeoP54_02341 636450381d14f71e8e664922f0ab8c6e 1119 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 217 236 7.9E-64 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 PhaeoP54_02341 636450381d14f71e8e664922f0ab8c6e 1119 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 252 269 7.9E-64 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 PhaeoP54_02341 636450381d14f71e8e664922f0ab8c6e 1119 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 310 339 7.9E-64 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 PhaeoP54_02341 636450381d14f71e8e664922f0ab8c6e 1119 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 392 410 7.9E-64 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 PhaeoP54_02341 636450381d14f71e8e664922f0ab8c6e 1119 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 181 193 7.9E-64 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 PhaeoP54_02341 636450381d14f71e8e664922f0ab8c6e 1119 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 7.9E-64 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 PhaeoP54_02341 636450381d14f71e8e664922f0ab8c6e 1119 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1112 12.821 T 14-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 PhaeoP54_02341 636450381d14f71e8e664922f0ab8c6e 1119 Hamap MF_01210_A Carbamoyl-phosphate synthase large chain [carB]. 5 1117 13.186 T 14-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 PhaeoP54_02341 636450381d14f71e8e664922f0ab8c6e 1119 SUPERFAMILY SSF52440 577 699 2.88E-46 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily PhaeoP54_02341 636450381d14f71e8e664922f0ab8c6e 1119 SUPERFAMILY SSF48108 408 563 1.11E-43 T 14-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 PhaeoP54_02341 636450381d14f71e8e664922f0ab8c6e 1119 Gene3D G3DSA:1.10.1030.10 416 565 1.8E-41 T 14-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 PhaeoP54_02341 636450381d14f71e8e664922f0ab8c6e 1119 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 442 561 1.6E-39 T 14-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 PhaeoP54_02341 636450381d14f71e8e664922f0ab8c6e 1119 Gene3D G3DSA:3.40.50.20 574 686 2.3E-47 T 14-10-2018 PhaeoP54_02341 636450381d14f71e8e664922f0ab8c6e 1119 Gene3D G3DSA:3.30.470.20 689 985 3.1E-107 T 14-10-2018 PhaeoP54_02341 636450381d14f71e8e664922f0ab8c6e 1119 SMART SM01096 439 561 4.0E-63 T 14-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 PhaeoP54_02341 636450381d14f71e8e664922f0ab8c6e 1119 SUPERFAMILY SSF52335 985 1118 3.92E-35 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily PhaeoP54_02341 636450381d14f71e8e664922f0ab8c6e 1119 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 310 317 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 PhaeoP54_02341 636450381d14f71e8e664922f0ab8c6e 1119 Gene3D G3DSA:3.30.470.20 119 415 1.0E-117 T 14-10-2018 PhaeoP54_02341 636450381d14f71e8e664922f0ab8c6e 1119 Pfam PF02142 MGS-like domain 1007 1092 8.0E-16 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain PhaeoP54_00906 2f9bbe0573c00ed23d893f241a4d74f8 303 Gene3D G3DSA:1.10.10.10 184 297 7.8E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_00906 2f9bbe0573c00ed23d893f241a4d74f8 303 Pfam PF09126 Restriction endonuclease NaeI 43 283 9.5E-62 T 14-10-2018 IPR015210 Type-2 restriction enzyme NaeI GO:0009036|GO:0009307 PhaeoP54_00906 2f9bbe0573c00ed23d893f241a4d74f8 303 Gene3D G3DSA:3.40.600.10 12 183 8.0E-45 T 14-10-2018 IPR037057 DNA mismatch repair MutH/Restriction endonuclease, type II superfamily GO:0003677|GO:0004519 PhaeoP54_00906 2f9bbe0573c00ed23d893f241a4d74f8 303 SUPERFAMILY SSF52980 41 286 1.23E-41 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 PhaeoP54_02367 a3e38dd6b7594ccdb8313e76462796cb 293 Pfam PF02567 Phenazine biosynthesis-like protein 8 285 1.7E-35 T 14-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 PhaeoP54_02367 a3e38dd6b7594ccdb8313e76462796cb 293 PIRSF PIRSF016184 1 289 4.8E-77 T 14-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 PhaeoP54_02367 a3e38dd6b7594ccdb8313e76462796cb 293 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 1 287 1.3E-42 T 14-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 PhaeoP54_02367 a3e38dd6b7594ccdb8313e76462796cb 293 SUPERFAMILY SSF54506 1 288 1.49E-58 T 14-10-2018 PhaeoP54_02367 a3e38dd6b7594ccdb8313e76462796cb 293 Gene3D G3DSA:3.10.310.10 8 277 1.7E-59 T 14-10-2018 PhaeoP54_02367 a3e38dd6b7594ccdb8313e76462796cb 293 Gene3D G3DSA:3.10.310.10 114 276 1.7E-59 T 14-10-2018 PhaeoP54_00593 7b0ad48be1b3e5f01214abc94e4dedcb 895 Hamap MF_00952 DNA topoisomerase 1 [topA]. 1 750 52.738 T 14-10-2018 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 PhaeoP54_00593 7b0ad48be1b3e5f01214abc94e4dedcb 895 Pfam PF13368 Topoisomerase C-terminal repeat 663 730 3.2E-9 T 14-10-2018 IPR025589 Topoisomerase C-terminal repeat PhaeoP54_00593 7b0ad48be1b3e5f01214abc94e4dedcb 895 Pfam PF13368 Topoisomerase C-terminal repeat 730 789 7.1E-18 T 14-10-2018 IPR025589 Topoisomerase C-terminal repeat PhaeoP54_00593 7b0ad48be1b3e5f01214abc94e4dedcb 895 Pfam PF13368 Topoisomerase C-terminal repeat 804 855 4.5E-20 T 14-10-2018 IPR025589 Topoisomerase C-terminal repeat PhaeoP54_00593 7b0ad48be1b3e5f01214abc94e4dedcb 895 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 614 648 4.7E-14 T 14-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 PhaeoP54_00593 7b0ad48be1b3e5f01214abc94e4dedcb 895 SMART SM00436 107 195 2.3E-43 T 14-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 PhaeoP54_00593 7b0ad48be1b3e5f01214abc94e4dedcb 895 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 4 648 1.7E-211 T 14-10-2018 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 PhaeoP54_00593 7b0ad48be1b3e5f01214abc94e4dedcb 895 SUPERFAMILY SSF56712 2 622 2.49E-178 T 14-10-2018 IPR023405 DNA topoisomerase, type IA, core domain PhaeoP54_00593 7b0ad48be1b3e5f01214abc94e4dedcb 895 Pfam PF01751 Toprim domain 3 116 7.9E-24 T 14-10-2018 IPR006171 TOPRIM domain PhaeoP54_00593 7b0ad48be1b3e5f01214abc94e4dedcb 895 Gene3D G3DSA:1.10.290.10 257 383 3.9E-151 T 14-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 PhaeoP54_00593 7b0ad48be1b3e5f01214abc94e4dedcb 895 Gene3D G3DSA:1.10.460.10 141 571 3.9E-151 T 14-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 PhaeoP54_00593 7b0ad48be1b3e5f01214abc94e4dedcb 895 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 286 300 - T 14-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 PhaeoP54_00593 7b0ad48be1b3e5f01214abc94e4dedcb 895 SMART SM00437 249 531 5.0E-103 T 14-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 PhaeoP54_00593 7b0ad48be1b3e5f01214abc94e4dedcb 895 Gene3D G3DSA:3.40.50.140 1 137 4.6E-48 T 14-10-2018 PhaeoP54_00593 7b0ad48be1b3e5f01214abc94e4dedcb 895 Gene3D G3DSA:2.70.20.10 187 478 3.9E-151 T 14-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 PhaeoP54_00593 7b0ad48be1b3e5f01214abc94e4dedcb 895 SMART SM00493 1 101 1.6E-26 T 14-10-2018 IPR006171 TOPRIM domain PhaeoP54_00593 7b0ad48be1b3e5f01214abc94e4dedcb 895 SUPERFAMILY SSF57783 602 651 1.55E-8 T 14-10-2018 PhaeoP54_00593 7b0ad48be1b3e5f01214abc94e4dedcb 895 Pfam PF01131 DNA topoisomerase 134 568 5.8E-120 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 PhaeoP54_00593 7b0ad48be1b3e5f01214abc94e4dedcb 895 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 165 183 1.8E-34 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 PhaeoP54_00593 7b0ad48be1b3e5f01214abc94e4dedcb 895 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 291 300 1.8E-34 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 PhaeoP54_00593 7b0ad48be1b3e5f01214abc94e4dedcb 895 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 368 384 1.8E-34 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 PhaeoP54_00593 7b0ad48be1b3e5f01214abc94e4dedcb 895 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 494 508 1.8E-34 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 PhaeoP54_00593 7b0ad48be1b3e5f01214abc94e4dedcb 895 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 75 88 1.8E-34 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 PhaeoP54_03040 148ddb3e679049489c3659bd729e75f7 706 Gene3D G3DSA:3.30.70.240 618 688 1.6E-86 T 14-10-2018 PhaeoP54_03040 148ddb3e679049489c3659bd729e75f7 706 Pfam PF03764 Elongation factor G, domain IV 493 611 1.1E-44 T 14-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 PhaeoP54_03040 148ddb3e679049489c3659bd729e75f7 706 PRINTS PR00315 GTP-binding elongation factor signature 12 25 2.9E-16 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PhaeoP54_03040 148ddb3e679049489c3659bd729e75f7 706 PRINTS PR00315 GTP-binding elongation factor signature 141 150 2.9E-16 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PhaeoP54_03040 148ddb3e679049489c3659bd729e75f7 706 PRINTS PR00315 GTP-binding elongation factor signature 89 99 2.9E-16 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PhaeoP54_03040 148ddb3e679049489c3659bd729e75f7 706 PRINTS PR00315 GTP-binding elongation factor signature 58 66 2.9E-16 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PhaeoP54_03040 148ddb3e679049489c3659bd729e75f7 706 PRINTS PR00315 GTP-binding elongation factor signature 105 116 2.9E-16 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PhaeoP54_03040 148ddb3e679049489c3659bd729e75f7 706 Hamap MF_00054_B Elongation factor G [fusA]. 6 705 107.355 T 14-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 PhaeoP54_03040 148ddb3e679049489c3659bd729e75f7 706 SUPERFAMILY SSF52540 6 293 3.49E-98 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_03040 148ddb3e679049489c3659bd729e75f7 706 Gene3D G3DSA:2.40.30.10 304 419 4.3E-42 T 14-10-2018 PhaeoP54_03040 148ddb3e679049489c3659bd729e75f7 706 Gene3D G3DSA:3.30.70.870 420 497 2.3E-31 T 14-10-2018 PhaeoP54_03040 148ddb3e679049489c3659bd729e75f7 706 SMART SM00838 614 701 1.4E-47 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like PhaeoP54_03040 148ddb3e679049489c3659bd729e75f7 706 Pfam PF03144 Elongation factor Tu domain 2 338 405 2.0E-17 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 PhaeoP54_03040 148ddb3e679049489c3659bd729e75f7 706 TIGRFAM TIGR00484 EF-G: translation elongation factor G 1 704 0.0 T 14-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 PhaeoP54_03040 148ddb3e679049489c3659bd729e75f7 706 SMART SM00889 494 612 2.1E-67 T 14-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 PhaeoP54_03040 148ddb3e679049489c3659bd729e75f7 706 Pfam PF00009 Elongation factor Tu GTP binding domain 10 293 6.5E-66 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PhaeoP54_03040 148ddb3e679049489c3659bd729e75f7 706 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 11 190 1.5E-31 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 PhaeoP54_03040 148ddb3e679049489c3659bd729e75f7 706 Pfam PF00679 Elongation factor G C-terminus 615 700 8.2E-29 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like PhaeoP54_03040 148ddb3e679049489c3659bd729e75f7 706 Gene3D G3DSA:3.40.50.300 1 298 3.4E-104 T 14-10-2018 PhaeoP54_03040 148ddb3e679049489c3659bd729e75f7 706 Pfam PF14492 Elongation Factor G, domain II 418 491 2.8E-33 T 14-10-2018 PhaeoP54_03040 148ddb3e679049489c3659bd729e75f7 706 SUPERFAMILY SSF54211 493 612 3.03E-43 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold PhaeoP54_03040 148ddb3e679049489c3659bd729e75f7 706 SUPERFAMILY SSF54980 617 703 1.82E-29 T 14-10-2018 IPR035647 EF-G domain III/V-like PhaeoP54_03040 148ddb3e679049489c3659bd729e75f7 706 SUPERFAMILY SSF50447 276 418 3.98E-36 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily PhaeoP54_03040 148ddb3e679049489c3659bd729e75f7 706 SUPERFAMILY SSF54980 416 494 1.55E-24 T 14-10-2018 IPR035647 EF-G domain III/V-like PhaeoP54_03040 148ddb3e679049489c3659bd729e75f7 706 Gene3D G3DSA:3.30.230.10 498 701 1.6E-86 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PhaeoP54_03040 148ddb3e679049489c3659bd729e75f7 706 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site PhaeoP54_02236 1fa76a00bc93e51edc0ce96d268151b0 148 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 49 133 1.2E-17 T 14-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 PhaeoP54_02236 1fa76a00bc93e51edc0ce96d268151b0 148 ProSitePatterns PS00814 Adrenodoxin family, iron-sulfur binding region signature. 81 91 - T 14-10-2018 IPR018298 Adrenodoxin, iron-sulphur binding site GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 PhaeoP54_02236 1fa76a00bc93e51edc0ce96d268151b0 148 PRINTS PR00355 Adrenodoxin signature 81 91 2.5E-10 T 14-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 PhaeoP54_02236 1fa76a00bc93e51edc0ce96d268151b0 148 PRINTS PR00355 Adrenodoxin signature 100 114 2.5E-10 T 14-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 PhaeoP54_02236 1fa76a00bc93e51edc0ce96d268151b0 148 PRINTS PR00355 Adrenodoxin signature 124 132 2.5E-10 T 14-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 PhaeoP54_02236 1fa76a00bc93e51edc0ce96d268151b0 148 SUPERFAMILY SSF54292 44 146 1.08E-34 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 PhaeoP54_02236 1fa76a00bc93e51edc0ce96d268151b0 148 Gene3D G3DSA:3.10.20.30 28 148 9.9E-39 T 14-10-2018 IPR012675 Beta-grasp domain superfamily PhaeoP54_03041 fe6c247e646f0eff9dacbcb2c92efb5d 156 SUPERFAMILY SSF47973 4 149 4.19E-62 T 14-10-2018 IPR036823 Ribosomal protein S7 domain superfamily PhaeoP54_03041 fe6c247e646f0eff9dacbcb2c92efb5d 156 PIRSF PIRSF002122 2 156 5.0E-62 T 14-10-2018 IPR000235 Ribosomal protein S5/S7 GO:0006412 PhaeoP54_03041 fe6c247e646f0eff9dacbcb2c92efb5d 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 36.112 T 14-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 PhaeoP54_03041 fe6c247e646f0eff9dacbcb2c92efb5d 156 Gene3D G3DSA:1.10.455.10 2 156 7.9E-64 T 14-10-2018 IPR036823 Ribosomal protein S7 domain superfamily PhaeoP54_03041 fe6c247e646f0eff9dacbcb2c92efb5d 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 14-10-2018 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PhaeoP54_03041 fe6c247e646f0eff9dacbcb2c92efb5d 156 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 1.0E-66 T 14-10-2018 IPR023798 Ribosomal protein S7 domain PhaeoP54_03041 fe6c247e646f0eff9dacbcb2c92efb5d 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 156 5.3E-71 T 14-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 PhaeoP54_00670 ddf63a161675576c7c1ad95ab8ea5d14 149 Pfam PF11071 Nucleoside 2-deoxyribosyltransferase YtoQ 6 143 4.0E-65 T 14-10-2018 IPR019884 YtoQ family protein PhaeoP54_00670 ddf63a161675576c7c1ad95ab8ea5d14 149 Gene3D G3DSA:3.40.50.450 3 142 3.6E-6 T 14-10-2018 PhaeoP54_00670 ddf63a161675576c7c1ad95ab8ea5d14 149 TIGRFAM TIGR03646 YtoQ_fam: YtoQ family protein 3 144 4.5E-68 T 14-10-2018 IPR019884 YtoQ family protein PhaeoP54_00670 ddf63a161675576c7c1ad95ab8ea5d14 149 SUPERFAMILY SSF52309 4 116 6.1E-5 T 14-10-2018 PhaeoP54_02668 9ab3cbac940c14afd7417035fef88988 991 Gene3D G3DSA:3.40.228.10 200 399 1.9E-133 T 14-10-2018 PhaeoP54_02668 9ab3cbac940c14afd7417035fef88988 991 PIRSF PIRSF036643 27 636 2.1E-112 T 14-10-2018 PhaeoP54_02668 9ab3cbac940c14afd7417035fef88988 991 PIRSF PIRSF036643 825 946 1.1E-15 T 14-10-2018 PhaeoP54_02668 9ab3cbac940c14afd7417035fef88988 991 SUPERFAMILY SSF50692 794 988 1.84E-36 T 14-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily PhaeoP54_02668 9ab3cbac940c14afd7417035fef88988 991 Gene3D G3DSA:2.20.25.90 66 119 2.5E-10 T 14-10-2018 PhaeoP54_02668 9ab3cbac940c14afd7417035fef88988 991 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 71 88 - T 14-10-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 PhaeoP54_02668 9ab3cbac940c14afd7417035fef88988 991 Pfam PF00384 Molybdopterin oxidoreductase 123 576 6.5E-58 T 14-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PhaeoP54_02668 9ab3cbac940c14afd7417035fef88988 991 SUPERFAMILY SSF53706 66 654 5.1E-199 T 14-10-2018 PhaeoP54_02668 9ab3cbac940c14afd7417035fef88988 991 Pfam PF01568 Molydopterin dinucleotide binding domain 858 982 2.0E-20 T 14-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 PhaeoP54_02668 9ab3cbac940c14afd7417035fef88988 991 Gene3D G3DSA:3.40.50.740 129 625 1.9E-133 T 14-10-2018 PhaeoP54_02668 9ab3cbac940c14afd7417035fef88988 991 SMART SM00926 66 120 2.5E-13 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PhaeoP54_02668 9ab3cbac940c14afd7417035fef88988 991 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 67 119 1.5E-10 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PhaeoP54_02668 9ab3cbac940c14afd7417035fef88988 991 Gene3D G3DSA:2.40.40.20 807 991 1.5E-42 T 14-10-2018 PhaeoP54_03958 4c09aacc54ddfffb999486046c36150f 722 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 476 502 2.6E-47 T 14-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 PhaeoP54_03958 4c09aacc54ddfffb999486046c36150f 722 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 265 288 2.6E-47 T 14-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 PhaeoP54_03958 4c09aacc54ddfffb999486046c36150f 722 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 26 48 2.6E-47 T 14-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 PhaeoP54_03958 4c09aacc54ddfffb999486046c36150f 722 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 52 65 2.6E-47 T 14-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 PhaeoP54_03958 4c09aacc54ddfffb999486046c36150f 722 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 67 92 2.6E-47 T 14-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 PhaeoP54_03958 4c09aacc54ddfffb999486046c36150f 722 SUPERFAMILY SSF48113 19 429 1.11E-146 T 14-10-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 PhaeoP54_03958 4c09aacc54ddfffb999486046c36150f 722 SUPERFAMILY SSF48113 430 721 5.16E-102 T 14-10-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 PhaeoP54_03958 4c09aacc54ddfffb999486046c36150f 722 ProSitePatterns PS00436 Peroxidases active site signature. 90 101 - T 14-10-2018 IPR019794 Peroxidase, active site GO:0004601|GO:0055114 PhaeoP54_03958 4c09aacc54ddfffb999486046c36150f 722 Gene3D G3DSA:1.10.520.10 431 721 4.7E-136 T 14-10-2018 PhaeoP54_03958 4c09aacc54ddfffb999486046c36150f 722 Gene3D G3DSA:1.10.420.20 191 397 3.3E-208 T 14-10-2018 PhaeoP54_03958 4c09aacc54ddfffb999486046c36150f 722 Gene3D G3DSA:1.10.520.10 23 430 3.3E-208 T 14-10-2018 PhaeoP54_03958 4c09aacc54ddfffb999486046c36150f 722 Pfam PF00141 Peroxidase 77 395 6.8E-50 T 14-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 PhaeoP54_03958 4c09aacc54ddfffb999486046c36150f 722 Pfam PF00141 Peroxidase 404 696 1.1E-34 T 14-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 PhaeoP54_03958 4c09aacc54ddfffb999486046c36150f 722 TIGRFAM TIGR00198 cat_per_HPI: catalase/peroxidase HPI 11 721 0.0 T 14-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 PhaeoP54_03958 4c09aacc54ddfffb999486046c36150f 722 Hamap MF_01961 Catalase-peroxidase [katG]. 7 722 38.462 T 14-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 PhaeoP54_03958 4c09aacc54ddfffb999486046c36150f 722 Gene3D G3DSA:1.10.420.10 576 697 4.7E-136 T 14-10-2018 PhaeoP54_03958 4c09aacc54ddfffb999486046c36150f 722 PRINTS PR00458 Haem peroxidase superfamily signature 168 180 4.3E-21 T 14-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 PhaeoP54_03958 4c09aacc54ddfffb999486046c36150f 722 PRINTS PR00458 Haem peroxidase superfamily signature 257 272 4.3E-21 T 14-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 PhaeoP54_03958 4c09aacc54ddfffb999486046c36150f 722 PRINTS PR00458 Haem peroxidase superfamily signature 90 104 4.3E-21 T 14-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 PhaeoP54_03958 4c09aacc54ddfffb999486046c36150f 722 PRINTS PR00458 Haem peroxidase superfamily signature 316 331 4.3E-21 T 14-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 PhaeoP54_03958 4c09aacc54ddfffb999486046c36150f 722 PRINTS PR00458 Haem peroxidase superfamily signature 150 167 4.3E-21 T 14-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 PhaeoP54_04052 57a1a9dc350c124540c1b0f1ce0a5795 372 TIGRFAM TIGR01472 gmd: GDP-mannose 4,6-dehydratase 2 352 4.2E-178 T 14-10-2018 IPR006368 GDP-mannose 4,6-dehydratase GO:0008446|GO:0019673 KEGG: 00051+4.2.1.47|KEGG: 00520+4.2.1.47|MetaCyc: PWY-5738|MetaCyc: PWY-5739|MetaCyc: PWY-5740|MetaCyc: PWY-66|MetaCyc: PWY-7573|Reactome: R-HSA-6787639 PhaeoP54_04052 57a1a9dc350c124540c1b0f1ce0a5795 372 Hamap MF_00955 GDP-mannose 4,6-dehydratase [gmd]. 2 355 55.967 T 14-10-2018 IPR006368 GDP-mannose 4,6-dehydratase GO:0008446|GO:0019673 KEGG: 00051+4.2.1.47|KEGG: 00520+4.2.1.47|MetaCyc: PWY-5738|MetaCyc: PWY-5739|MetaCyc: PWY-5740|MetaCyc: PWY-66|MetaCyc: PWY-7573|Reactome: R-HSA-6787639 PhaeoP54_04052 57a1a9dc350c124540c1b0f1ce0a5795 372 Pfam PF16363 GDP-mannose 4,6 dehydratase 5 345 2.2E-159 T 14-10-2018 IPR016040 NAD(P)-binding domain PhaeoP54_04052 57a1a9dc350c124540c1b0f1ce0a5795 372 Gene3D G3DSA:3.90.25.10 192 350 4.5E-165 T 14-10-2018 PhaeoP54_04052 57a1a9dc350c124540c1b0f1ce0a5795 372 Gene3D G3DSA:3.40.50.720 4 336 4.5E-165 T 14-10-2018 PhaeoP54_04052 57a1a9dc350c124540c1b0f1ce0a5795 372 SUPERFAMILY SSF51735 2 351 3.84E-87 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PhaeoP54_03798 429e417141d861c09779cc717f7be3cf 1341 SUPERFAMILY SSF52821 143 244 2.36E-18 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily PhaeoP54_03798 429e417141d861c09779cc717f7be3cf 1341 Gene3D G3DSA:3.50.30.10 1246 1339 1.4E-15 T 14-10-2018 PhaeoP54_03798 429e417141d861c09779cc717f7be3cf 1341 Gene3D G3DSA:3.30.1490.20 650 741 1.1E-13 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 PhaeoP54_03798 429e417141d861c09779cc717f7be3cf 1341 SUPERFAMILY SSF52009 1229 1322 1.96E-15 T 14-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 PhaeoP54_03798 429e417141d861c09779cc717f7be3cf 1341 Gene3D G3DSA:3.40.250.10 267 359 7.7E-12 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily PhaeoP54_03798 429e417141d861c09779cc717f7be3cf 1341 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 804 852 3.2E-6 T 14-10-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 PhaeoP54_03798 429e417141d861c09779cc717f7be3cf 1341 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 672 784 5.3E-22 T 14-10-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 PhaeoP54_03798 429e417141d861c09779cc717f7be3cf 1341 Pfam PF02096 60Kd inner membrane protein 408 580 1.2E-14 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 PhaeoP54_03798 429e417141d861c09779cc717f7be3cf 1341 SUPERFAMILY SSF56059 615 881 3.41E-50 T 14-10-2018 PhaeoP54_03798 429e417141d861c09779cc717f7be3cf 1341 Pfam PF00391 PEP-utilising enzyme, mobile domain 1257 1322 7.0E-13 T 14-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 PhaeoP54_03798 429e417141d861c09779cc717f7be3cf 1341 SMART SM00450 268 383 0.0011 T 14-10-2018 IPR001763 Rhodanese-like domain PhaeoP54_03798 429e417141d861c09779cc717f7be3cf 1341 SMART SM00450 150 243 3.5E-7 T 14-10-2018 IPR001763 Rhodanese-like domain PhaeoP54_03798 429e417141d861c09779cc717f7be3cf 1341 ProSitePatterns PS00380 Rhodanese signature 1. 293 304 - T 14-10-2018 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350|MetaCyc: PWY-7927|Reactome: R-HSA-1614558 PhaeoP54_03798 429e417141d861c09779cc717f7be3cf 1341 Gene3D G3DSA:3.40.250.10 152 257 7.3E-15 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily PhaeoP54_03798 429e417141d861c09779cc717f7be3cf 1341 Gene3D G3DSA:3.30.470.20 742 840 5.1E-18 T 14-10-2018 PhaeoP54_03798 429e417141d861c09779cc717f7be3cf 1341 Pfam PF00581 Rhodanese-like domain 270 330 5.3E-6 T 14-10-2018 IPR001763 Rhodanese-like domain PhaeoP54_03798 429e417141d861c09779cc717f7be3cf 1341 Pfam PF00581 Rhodanese-like domain 153 238 2.2E-6 T 14-10-2018 IPR001763 Rhodanese-like domain PhaeoP54_03798 429e417141d861c09779cc717f7be3cf 1341 SUPERFAMILY SSF52821 265 352 6.42E-16 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily PhaeoP54_02089 a996a6094bcd70f340c46842a667d2d7 156 Pfam PF13673 Acetyltransferase (GNAT) domain 27 152 5.1E-21 T 14-10-2018 IPR000182 GNAT domain PhaeoP54_02089 a996a6094bcd70f340c46842a667d2d7 156 SUPERFAMILY SSF55729 1 155 2.92E-35 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase PhaeoP54_02089 a996a6094bcd70f340c46842a667d2d7 156 Gene3D G3DSA:3.40.630.30 1 156 9.0E-44 T 14-10-2018 PhaeoP54_01039 40738fe33d4dfa870a233189f9f26ec9 375 SUPERFAMILY SSF52540 22 262 1.33E-78 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_01039 40738fe33d4dfa870a233189f9f26ec9 375 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PhaeoP54_01039 40738fe33d4dfa870a233189f9f26ec9 375 SMART SM00382 46 230 7.0E-18 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_01039 40738fe33d4dfa870a233189f9f26ec9 375 Gene3D G3DSA:3.40.50.300 21 271 8.1E-73 T 14-10-2018 PhaeoP54_01039 40738fe33d4dfa870a233189f9f26ec9 375 Pfam PF08402 TOBE domain 289 371 2.0E-4 T 14-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 PhaeoP54_01039 40738fe33d4dfa870a233189f9f26ec9 375 SUPERFAMILY SSF50331 269 374 8.5E-10 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal PhaeoP54_01039 40738fe33d4dfa870a233189f9f26ec9 375 Pfam PF00005 ABC transporter 38 180 9.3E-35 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PhaeoP54_02384 6e035a4421d793f47fae8716e7fe6a4d 310 SUPERFAMILY SSF82114 172 308 1.16E-40 T 14-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 PhaeoP54_02384 6e035a4421d793f47fae8716e7fe6a4d 310 Pfam PF06574 FAD synthetase 13 165 3.6E-50 T 14-10-2018 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 PhaeoP54_02384 6e035a4421d793f47fae8716e7fe6a4d 310 Pfam PF01687 Riboflavin kinase 182 307 3.4E-32 T 14-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 PhaeoP54_02384 6e035a4421d793f47fae8716e7fe6a4d 310 Gene3D G3DSA:2.40.30.30 184 310 5.9E-38 T 14-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 PhaeoP54_02384 6e035a4421d793f47fae8716e7fe6a4d 310 Gene3D G3DSA:3.40.50.620 1 183 1.0E-56 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PhaeoP54_02384 6e035a4421d793f47fae8716e7fe6a4d 310 SUPERFAMILY SSF52374 18 175 1.72E-35 T 14-10-2018 PhaeoP54_02384 6e035a4421d793f47fae8716e7fe6a4d 310 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 20 307 3.3E-71 T 14-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 PhaeoP54_02384 6e035a4421d793f47fae8716e7fe6a4d 310 SMART SM00904 181 308 7.2E-51 T 14-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 PhaeoP54_02384 6e035a4421d793f47fae8716e7fe6a4d 310 PIRSF PIRSF004491 1 310 2.5E-90 T 14-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 PhaeoP54_03384 7547d3dda6b7ba38adef3270820a9e81 297 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 5 267 1.1E-101 T 14-10-2018 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7817 PhaeoP54_03384 7547d3dda6b7ba38adef3270820a9e81 297 SUPERFAMILY SSF53448 2 271 6.08E-60 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PhaeoP54_03384 7547d3dda6b7ba38adef3270820a9e81 297 Pfam PF00483 Nucleotidyl transferase 12 268 1.1E-25 T 14-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 PhaeoP54_03384 7547d3dda6b7ba38adef3270820a9e81 297 Gene3D G3DSA:3.90.550.10 1 295 9.2E-84 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PhaeoP54_00795 232bdfb128f78c1095cc4811a5a86829 372 Pfam PF09375 Imelysin 67 351 3.6E-44 T 14-10-2018 IPR018976 Imelysin-like domain PhaeoP54_00795 232bdfb128f78c1095cc4811a5a86829 372 Gene3D G3DSA:1.20.1420.20 51 372 8.1E-79 T 14-10-2018 IPR038352 Imelysin-like domain superfamily PhaeoP54_01672 d48eee496bfc29511c689e9c2257a904 193 PRINTS PR00096 Glutamine amidotransferase superfamily signature 75 86 1.0E-13 T 14-10-2018 PhaeoP54_01672 d48eee496bfc29511c689e9c2257a904 193 PRINTS PR00096 Glutamine amidotransferase superfamily signature 165 178 1.0E-13 T 14-10-2018 PhaeoP54_01672 d48eee496bfc29511c689e9c2257a904 193 PRINTS PR00096 Glutamine amidotransferase superfamily signature 47 56 1.0E-13 T 14-10-2018 PhaeoP54_01672 d48eee496bfc29511c689e9c2257a904 193 Gene3D G3DSA:3.40.50.880 1 191 1.6E-63 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like PhaeoP54_01672 d48eee496bfc29511c689e9c2257a904 193 SUPERFAMILY SSF52317 1 189 6.11E-58 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like PhaeoP54_01672 d48eee496bfc29511c689e9c2257a904 193 PRINTS PR00097 Anthranilate synthase component II signature 100 108 6.0E-34 T 14-10-2018 PhaeoP54_01672 d48eee496bfc29511c689e9c2257a904 193 PRINTS PR00097 Anthranilate synthase component II signature 2 16 6.0E-34 T 14-10-2018 PhaeoP54_01672 d48eee496bfc29511c689e9c2257a904 193 PRINTS PR00097 Anthranilate synthase component II signature 120 132 6.0E-34 T 14-10-2018 PhaeoP54_01672 d48eee496bfc29511c689e9c2257a904 193 PRINTS PR00097 Anthranilate synthase component II signature 75 86 6.0E-34 T 14-10-2018 PhaeoP54_01672 d48eee496bfc29511c689e9c2257a904 193 PRINTS PR00097 Anthranilate synthase component II signature 47 56 6.0E-34 T 14-10-2018 PhaeoP54_01672 d48eee496bfc29511c689e9c2257a904 193 PRINTS PR00097 Anthranilate synthase component II signature 165 178 6.0E-34 T 14-10-2018 PhaeoP54_01672 d48eee496bfc29511c689e9c2257a904 193 Pfam PF00117 Glutamine amidotransferase class-I 3 186 2.0E-55 T 14-10-2018 IPR017926 Glutamine amidotransferase PhaeoP54_01672 d48eee496bfc29511c689e9c2257a904 193 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 75 91 6.3E-8 T 14-10-2018 PhaeoP54_01672 d48eee496bfc29511c689e9c2257a904 193 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 44 58 6.3E-8 T 14-10-2018 PhaeoP54_01672 d48eee496bfc29511c689e9c2257a904 193 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 1 187 2.7E-70 T 14-10-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 PhaeoP54_03006 ac15a168bdaa3ae64f8ff6b02dbb8970 215 PRINTS PR00094 Adenylate kinase signature 178 192 4.1E-32 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 PhaeoP54_03006 ac15a168bdaa3ae64f8ff6b02dbb8970 215 PRINTS PR00094 Adenylate kinase signature 33 47 4.1E-32 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 PhaeoP54_03006 ac15a168bdaa3ae64f8ff6b02dbb8970 215 PRINTS PR00094 Adenylate kinase signature 81 97 4.1E-32 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 PhaeoP54_03006 ac15a168bdaa3ae64f8ff6b02dbb8970 215 PRINTS PR00094 Adenylate kinase signature 5 18 4.1E-32 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 PhaeoP54_03006 ac15a168bdaa3ae64f8ff6b02dbb8970 215 PRINTS PR00094 Adenylate kinase signature 161 176 4.1E-32 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 PhaeoP54_03006 ac15a168bdaa3ae64f8ff6b02dbb8970 215 SUPERFAMILY SSF52540 1 208 9.05E-34 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_03006 ac15a168bdaa3ae64f8ff6b02dbb8970 215 Pfam PF05191 Adenylate kinase, active site lid 127 163 1.5E-6 T 14-10-2018 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 PhaeoP54_03006 ac15a168bdaa3ae64f8ff6b02dbb8970 215 Pfam PF00406 Adenylate kinase 6 191 3.3E-53 T 14-10-2018 PhaeoP54_03006 ac15a168bdaa3ae64f8ff6b02dbb8970 215 Gene3D G3DSA:3.40.50.300 2 214 4.6E-66 T 14-10-2018 PhaeoP54_03006 ac15a168bdaa3ae64f8ff6b02dbb8970 215 Hamap MF_00235 Adenylate kinase [adk]. 2 214 41.147 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 PhaeoP54_03006 ac15a168bdaa3ae64f8ff6b02dbb8970 215 TIGRFAM TIGR01351 adk: adenylate kinase 3 209 3.9E-68 T 14-10-2018 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 PhaeoP54_03006 ac15a168bdaa3ae64f8ff6b02dbb8970 215 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 14-10-2018 IPR033690 Adenylate kinase, conserved site KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 PhaeoP54_00881 ad7246f2c1f6f4da659009d47e45c947 325 Pfam PF04055 Radical SAM superfamily 54 211 7.8E-15 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 PhaeoP54_00881 ad7246f2c1f6f4da659009d47e45c947 325 TIGRFAM TIGR00433 bioB: biotin synthase 18 314 9.2E-121 T 14-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 PhaeoP54_00881 ad7246f2c1f6f4da659009d47e45c947 325 Gene3D G3DSA:3.20.20.70 8 319 2.9E-125 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PhaeoP54_00881 ad7246f2c1f6f4da659009d47e45c947 325 PIRSF PIRSF001619 2 321 7.6E-131 T 14-10-2018 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 PhaeoP54_00881 ad7246f2c1f6f4da659009d47e45c947 325 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 224 314 4.5E-19 T 14-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 PhaeoP54_00881 ad7246f2c1f6f4da659009d47e45c947 325 SMART SM00729 47 256 1.3E-38 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 PhaeoP54_00881 ad7246f2c1f6f4da659009d47e45c947 325 SUPERFAMILY SSF102114 9 315 3.27E-84 T 14-10-2018 PhaeoP54_00881 ad7246f2c1f6f4da659009d47e45c947 325 SMART SM00876 224 316 5.8E-43 T 14-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 PhaeoP54_00881 ad7246f2c1f6f4da659009d47e45c947 325 Hamap MF_01694 Biotin synthase [bioB]. 9 317 41.404 T 14-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 PhaeoP54_01537 4a4df9a476f1931aabfe4834147d2bb3 179 SUPERFAMILY SSF55729 10 177 8.89E-29 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase PhaeoP54_01537 4a4df9a476f1931aabfe4834147d2bb3 179 Pfam PF13302 Acetyltransferase (GNAT) domain 17 154 4.1E-25 T 14-10-2018 IPR000182 GNAT domain PhaeoP54_01537 4a4df9a476f1931aabfe4834147d2bb3 179 Gene3D G3DSA:3.40.630.30 3 178 4.5E-31 T 14-10-2018 PhaeoP54_02855 25a60aa6ca70af748338b8defa65130c 208 SUPERFAMILY SSF53335 6 201 6.35E-39 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PhaeoP54_02855 25a60aa6ca70af748338b8defa65130c 208 Gene3D G3DSA:3.40.50.150 2 194 3.9E-36 T 14-10-2018 PhaeoP54_02855 25a60aa6ca70af748338b8defa65130c 208 Pfam PF08241 Methyltransferase domain 45 141 4.6E-24 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 PhaeoP54_02836 8adc1775eac0fa1ef09fc60ac069f242 446 ProSitePatterns PS01219 Ammonium transporters signature. 202 227 - T 14-10-2018 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 PhaeoP54_02836 8adc1775eac0fa1ef09fc60ac069f242 446 TIGRFAM TIGR03644 marine_trans_1: probable ammonium transporter, marine subtype 40 443 2.0E-191 T 14-10-2018 IPR019879 Ammonium transporter, marine subtype PhaeoP54_02836 8adc1775eac0fa1ef09fc60ac069f242 446 Pfam PF00909 Ammonium Transporter Family 47 440 1.4E-98 T 14-10-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 PhaeoP54_02836 8adc1775eac0fa1ef09fc60ac069f242 446 Gene3D G3DSA:1.10.3430.10 22 445 2.8E-119 T 14-10-2018 IPR029020 Ammonium/urea transporter PhaeoP54_02836 8adc1775eac0fa1ef09fc60ac069f242 446 SUPERFAMILY SSF111352 42 421 2.75E-102 T 14-10-2018 PhaeoP54_02116 3ba98cace2a3857d777b30f687152ca9 447 SMART SM00363 52 111 9.7E-12 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PhaeoP54_02116 3ba98cace2a3857d777b30f687152ca9 447 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 118 276 1.4E-40 T 14-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 PhaeoP54_02116 3ba98cace2a3857d777b30f687152ca9 447 SUPERFAMILY SSF55174 43 110 8.05E-14 T 14-10-2018 PhaeoP54_02116 3ba98cace2a3857d777b30f687152ca9 447 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 151 165 - T 14-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 PhaeoP54_02116 3ba98cace2a3857d777b30f687152ca9 447 Gene3D G3DSA:3.30.70.580 115 272 1.5E-47 T 14-10-2018 PhaeoP54_02116 3ba98cace2a3857d777b30f687152ca9 447 Pfam PF00849 RNA pseudouridylate synthase 114 244 4.0E-10 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 PhaeoP54_02116 3ba98cace2a3857d777b30f687152ca9 447 Gene3D G3DSA:3.10.290.10 46 107 2.5E-18 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 PhaeoP54_02116 3ba98cace2a3857d777b30f687152ca9 447 Pfam PF01479 S4 domain 53 93 4.1E-13 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PhaeoP54_02116 3ba98cace2a3857d777b30f687152ca9 447 Gene3D G3DSA:3.30.70.1560 175 265 1.5E-47 T 14-10-2018 PhaeoP54_02116 3ba98cace2a3857d777b30f687152ca9 447 SUPERFAMILY SSF55120 110 276 1.01E-36 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 PhaeoP54_01462 954203970b9367aaa449a20b5cc6f875 406 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 30 243 7.9E-58 T 14-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 PhaeoP54_01462 954203970b9367aaa449a20b5cc6f875 406 Pfam PF02542 YgbB family 251 403 8.2E-59 T 14-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 PhaeoP54_01462 954203970b9367aaa449a20b5cc6f875 406 SUPERFAMILY SSF53448 28 244 1.96E-49 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PhaeoP54_01462 954203970b9367aaa449a20b5cc6f875 406 Gene3D G3DSA:3.30.1330.50 248 406 3.3E-64 T 14-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 PhaeoP54_01462 954203970b9367aaa449a20b5cc6f875 406 Hamap MF_01520 Bifunctional enzyme IspD/IspF [ispDF]. 26 406 42.068 T 14-10-2018 IPR026596 Bifunctional enzyme IspD/IspF KEGG: 00900+4.6.1.12+2.7.7.60|MetaCyc: PWY-7560 PhaeoP54_01462 954203970b9367aaa449a20b5cc6f875 406 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 251 405 2.0E-62 T 14-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 PhaeoP54_01462 954203970b9367aaa449a20b5cc6f875 406 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 122 129 - T 14-10-2018 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 PhaeoP54_01462 954203970b9367aaa449a20b5cc6f875 406 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 250 405 33.335 T 14-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 PhaeoP54_01462 954203970b9367aaa449a20b5cc6f875 406 Gene3D G3DSA:3.90.550.10 21 246 2.1E-63 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PhaeoP54_01462 954203970b9367aaa449a20b5cc6f875 406 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 29 244 1.1E-65 T 14-10-2018 IPR034683 Cytidylyltransferase IspD/TarI GO:0070567 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 PhaeoP54_01462 954203970b9367aaa449a20b5cc6f875 406 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 27 244 37.383 T 14-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 PhaeoP54_01462 954203970b9367aaa449a20b5cc6f875 406 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 284 299 - T 14-10-2018 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 PhaeoP54_01462 954203970b9367aaa449a20b5cc6f875 406 SUPERFAMILY SSF69765 249 405 7.72E-63 T 14-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 PhaeoP54_03004 8e3a403fa6a312528ebaaa5ad363abaa 129 ProSitePatterns PS00054 Ribosomal protein S11 signature. 97 119 - T 14-10-2018 IPR018102 Ribosomal S11, conserved site PhaeoP54_03004 8e3a403fa6a312528ebaaa5ad363abaa 129 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 3 129 32.479 T 14-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 PhaeoP54_03004 8e3a403fa6a312528ebaaa5ad363abaa 129 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 10 126 1.4E-55 T 14-10-2018 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 PhaeoP54_03004 8e3a403fa6a312528ebaaa5ad363abaa 129 Gene3D G3DSA:3.30.420.80 1 129 1.1E-53 T 14-10-2018 IPR036967 Ribosomal protein S11 superfamily GO:0003735|GO:0005840|GO:0006412 PhaeoP54_03004 8e3a403fa6a312528ebaaa5ad363abaa 129 Pfam PF00411 Ribosomal protein S11 19 128 5.1E-48 T 14-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 PhaeoP54_03004 8e3a403fa6a312528ebaaa5ad363abaa 129 SUPERFAMILY SSF53137 14 129 1.61E-47 T 14-10-2018 PhaeoP54_03004 8e3a403fa6a312528ebaaa5ad363abaa 129 PIRSF PIRSF002131 1 129 2.5E-51 T 14-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 PhaeoP54_03412 7c70af0aac218d44ddde8a5d5a927d22 1009 Gene3D G3DSA:3.90.1200.10 117 318 6.0E-22 T 14-10-2018 PhaeoP54_03412 7c70af0aac218d44ddde8a5d5a927d22 1009 SUPERFAMILY SSF51261 427 534 8.37E-14 T 14-10-2018 IPR011055 Duplicated hybrid motif PhaeoP54_03412 7c70af0aac218d44ddde8a5d5a927d22 1009 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 818 856 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PhaeoP54_03412 7c70af0aac218d44ddde8a5d5a927d22 1009 Gene3D G3DSA:2.70.70.10 418 544 2.9E-15 T 14-10-2018 IPR011055 Duplicated hybrid motif PhaeoP54_03412 7c70af0aac218d44ddde8a5d5a927d22 1009 SUPERFAMILY SSF56112 7 319 2.92E-54 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily PhaeoP54_03412 7c70af0aac218d44ddde8a5d5a927d22 1009 Gene3D G3DSA:3.90.1150.10 604 999 3.4E-129 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 PhaeoP54_03412 7c70af0aac218d44ddde8a5d5a927d22 1009 SUPERFAMILY SSF53383 596 1006 2.04E-99 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PhaeoP54_03412 7c70af0aac218d44ddde8a5d5a927d22 1009 Gene3D G3DSA:3.40.640.10 637 903 3.4E-129 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PhaeoP54_03412 7c70af0aac218d44ddde8a5d5a927d22 1009 Pfam PF00202 Aminotransferase class-III 614 1003 1.3E-70 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PhaeoP54_03412 7c70af0aac218d44ddde8a5d5a927d22 1009 Pfam PF01551 Peptidase family M23 437 535 2.1E-13 T 14-10-2018 IPR016047 Peptidase M23 PhaeoP54_03412 7c70af0aac218d44ddde8a5d5a927d22 1009 Pfam PF01636 Phosphotransferase enzyme family 29 265 2.8E-24 T 14-10-2018 IPR002575 Aminoglycoside phosphotransferase PhaeoP54_01218 066920ee6a8fd8e6d2cdfd488b8f529a 111 Gene3D G3DSA:1.10.10.10 9 109 2.9E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_01218 066920ee6a8fd8e6d2cdfd488b8f529a 111 Pfam PF01022 Bacterial regulatory protein, arsR family 35 78 7.1E-10 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 PhaeoP54_01218 066920ee6a8fd8e6d2cdfd488b8f529a 111 SUPERFAMILY SSF46785 20 108 3.78E-24 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_01218 066920ee6a8fd8e6d2cdfd488b8f529a 111 SMART SM00418 27 105 8.7E-22 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 PhaeoP54_01218 066920ee6a8fd8e6d2cdfd488b8f529a 111 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 29 44 8.3E-10 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 PhaeoP54_01218 066920ee6a8fd8e6d2cdfd488b8f529a 111 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 61 76 8.3E-10 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 PhaeoP54_01218 066920ee6a8fd8e6d2cdfd488b8f529a 111 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 76 91 8.3E-10 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 PhaeoP54_02017 e538a83fa9f56e70168d51201537839c 488 Gene3D G3DSA:3.40.309.10 254 444 1.4E-163 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 PhaeoP54_02017 e538a83fa9f56e70168d51201537839c 488 Gene3D G3DSA:3.40.605.10 17 472 1.4E-163 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 PhaeoP54_02017 e538a83fa9f56e70168d51201537839c 488 Pfam PF00171 Aldehyde dehydrogenase family 16 472 2.2E-160 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 PhaeoP54_02017 e538a83fa9f56e70168d51201537839c 488 SUPERFAMILY SSF53720 2 477 4.45E-154 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 PhaeoP54_02017 e538a83fa9f56e70168d51201537839c 488 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 275 286 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 PhaeoP54_02017 e538a83fa9f56e70168d51201537839c 488 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 247 254 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 PhaeoP54_00514 fa2c812b96422000ad1b120c9b3c2953 617 Pfam PF01103 Surface antigen 425 617 8.5E-27 T 14-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 PhaeoP54_00514 fa2c812b96422000ad1b120c9b3c2953 617 Gene3D G3DSA:2.40.160.50 297 617 5.1E-47 T 14-10-2018 PhaeoP54_00514 fa2c812b96422000ad1b120c9b3c2953 617 Gene3D G3DSA:3.10.20.310 205 296 5.9E-8 T 14-10-2018 PhaeoP54_03833 375de203a59650c12b8b520ef96a9df4 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 168 186 3.7E-16 T 14-10-2018 PhaeoP54_03833 375de203a59650c12b8b520ef96a9df4 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 3.7E-16 T 14-10-2018 PhaeoP54_03833 375de203a59650c12b8b520ef96a9df4 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 284 306 3.7E-16 T 14-10-2018 PhaeoP54_03833 375de203a59650c12b8b520ef96a9df4 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 131 149 3.7E-16 T 14-10-2018 PhaeoP54_03833 375de203a59650c12b8b520ef96a9df4 450 Gene3D G3DSA:3.50.50.60 5 327 5.6E-84 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PhaeoP54_03833 375de203a59650c12b8b520ef96a9df4 450 PIRSF PIRSF000350 1 446 1.7E-68 T 14-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 PhaeoP54_03833 375de203a59650c12b8b520ef96a9df4 450 SUPERFAMILY SSF55424 338 445 2.06E-30 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 PhaeoP54_03833 375de203a59650c12b8b520ef96a9df4 450 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 321 1.0E-44 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PhaeoP54_03833 375de203a59650c12b8b520ef96a9df4 450 Gene3D G3DSA:3.30.390.30 338 450 1.1E-27 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 PhaeoP54_03833 375de203a59650c12b8b520ef96a9df4 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 2.5E-44 T 14-10-2018 PhaeoP54_03833 375de203a59650c12b8b520ef96a9df4 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 256 270 2.5E-44 T 14-10-2018 PhaeoP54_03833 375de203a59650c12b8b520ef96a9df4 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 402 417 2.5E-44 T 14-10-2018 PhaeoP54_03833 375de203a59650c12b8b520ef96a9df4 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 38 53 2.5E-44 T 14-10-2018 PhaeoP54_03833 375de203a59650c12b8b520ef96a9df4 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 134 143 2.5E-44 T 14-10-2018 PhaeoP54_03833 375de203a59650c12b8b520ef96a9df4 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 168 193 2.5E-44 T 14-10-2018 PhaeoP54_03833 375de203a59650c12b8b520ef96a9df4 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 337 358 2.5E-44 T 14-10-2018 PhaeoP54_03833 375de203a59650c12b8b520ef96a9df4 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 299 306 2.5E-44 T 14-10-2018 PhaeoP54_03833 375de203a59650c12b8b520ef96a9df4 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 424 444 2.5E-44 T 14-10-2018 PhaeoP54_03833 375de203a59650c12b8b520ef96a9df4 450 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 341 443 4.4E-21 T 14-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 PhaeoP54_03833 375de203a59650c12b8b520ef96a9df4 450 SUPERFAMILY SSF51905 3 371 1.9E-48 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PhaeoP54_03833 375de203a59650c12b8b520ef96a9df4 450 Gene3D G3DSA:3.50.50.60 143 262 5.6E-84 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PhaeoP54_00090 2baa878633eae119ab8632adcd466594 937 Pfam PF01612 3'-5' exonuclease 330 525 5.4E-34 T 14-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 PhaeoP54_00090 2baa878633eae119ab8632adcd466594 937 Gene3D G3DSA:3.30.420.10 327 550 2.7E-65 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 PhaeoP54_00090 2baa878633eae119ab8632adcd466594 937 SUPERFAMILY SSF53098 326 526 1.1E-50 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily PhaeoP54_00090 2baa878633eae119ab8632adcd466594 937 SUPERFAMILY SSF88723 11 178 9.53E-51 T 14-10-2018 IPR029060 PIN-like domain superfamily PhaeoP54_00090 2baa878633eae119ab8632adcd466594 937 SMART SM00482 694 897 7.0E-107 T 14-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PhaeoP54_00090 2baa878633eae119ab8632adcd466594 937 Pfam PF00476 DNA polymerase family A 558 935 1.8E-143 T 14-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PhaeoP54_00090 2baa878633eae119ab8632adcd466594 937 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 179 274 1.3E-29 T 14-10-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 PhaeoP54_00090 2baa878633eae119ab8632adcd466594 937 ProSitePatterns PS00447 DNA polymerase family A signature. 762 781 - T 14-10-2018 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PhaeoP54_00090 2baa878633eae119ab8632adcd466594 937 TIGRFAM TIGR00593 pola: DNA polymerase I 12 937 1.2E-281 T 14-10-2018 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PhaeoP54_00090 2baa878633eae119ab8632adcd466594 937 Gene3D G3DSA:1.10.150.20 717 859 3.3E-100 T 14-10-2018 PhaeoP54_00090 2baa878633eae119ab8632adcd466594 937 SMART SM00474 330 526 4.1E-30 T 14-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 PhaeoP54_00090 2baa878633eae119ab8632adcd466594 937 Gene3D G3DSA:1.10.150.20 182 255 2.6E-91 T 14-10-2018 PhaeoP54_00090 2baa878633eae119ab8632adcd466594 937 Gene3D G3DSA:3.30.70.370 670 933 3.3E-100 T 14-10-2018 PhaeoP54_00090 2baa878633eae119ab8632adcd466594 937 SUPERFAMILY SSF56672 529 937 1.56E-147 T 14-10-2018 PhaeoP54_00090 2baa878633eae119ab8632adcd466594 937 SMART SM00475 10 270 4.0E-105 T 14-10-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 PhaeoP54_00090 2baa878633eae119ab8632adcd466594 937 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 12 178 1.7E-53 T 14-10-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 PhaeoP54_00090 2baa878633eae119ab8632adcd466594 937 SMART SM00279 181 216 2.4E-9 T 14-10-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 PhaeoP54_00090 2baa878633eae119ab8632adcd466594 937 PRINTS PR00868 DNA-polymerase family A (pol I) signature 663 685 1.0E-74 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PhaeoP54_00090 2baa878633eae119ab8632adcd466594 937 PRINTS PR00868 DNA-polymerase family A (pol I) signature 738 751 1.0E-74 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PhaeoP54_00090 2baa878633eae119ab8632adcd466594 937 PRINTS PR00868 DNA-polymerase family A (pol I) signature 708 731 1.0E-74 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PhaeoP54_00090 2baa878633eae119ab8632adcd466594 937 PRINTS PR00868 DNA-polymerase family A (pol I) signature 762 787 1.0E-74 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PhaeoP54_00090 2baa878633eae119ab8632adcd466594 937 PRINTS PR00868 DNA-polymerase family A (pol I) signature 799 810 1.0E-74 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PhaeoP54_00090 2baa878633eae119ab8632adcd466594 937 PRINTS PR00868 DNA-polymerase family A (pol I) signature 880 893 1.0E-74 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PhaeoP54_00090 2baa878633eae119ab8632adcd466594 937 PRINTS PR00868 DNA-polymerase family A (pol I) signature 821 832 1.0E-74 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PhaeoP54_00090 2baa878633eae119ab8632adcd466594 937 PRINTS PR00868 DNA-polymerase family A (pol I) signature 686 701 1.0E-74 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PhaeoP54_00090 2baa878633eae119ab8632adcd466594 937 PRINTS PR00868 DNA-polymerase family A (pol I) signature 852 868 1.0E-74 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PhaeoP54_00090 2baa878633eae119ab8632adcd466594 937 Gene3D G3DSA:1.20.1060.10 551 666 3.1E-40 T 14-10-2018 PhaeoP54_00090 2baa878633eae119ab8632adcd466594 937 Gene3D G3DSA:3.40.50.1010 13 286 2.6E-91 T 14-10-2018 PhaeoP54_00090 2baa878633eae119ab8632adcd466594 937 SUPERFAMILY SSF47807 179 293 6.13E-29 T 14-10-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily PhaeoP54_00958 26cd9e3ba7029b0a03b9f10ef4f75fbc 854 Gene3D G3DSA:2.60.40.1840 441 533 5.3E-30 T 14-10-2018 IPR038438 Alanyl aminopeptidase, Ig-like domain superfamily PhaeoP54_00958 26cd9e3ba7029b0a03b9f10ef4f75fbc 854 Gene3D G3DSA:1.25.50.10 535 854 1.6E-100 T 14-10-2018 IPR037144 Peptidase M1, alanyl aminopeptidase, C-terminal domain superfamily PhaeoP54_00958 26cd9e3ba7029b0a03b9f10ef4f75fbc 854 Gene3D G3DSA:1.10.1740.60 193 276 6.2E-40 T 14-10-2018 PhaeoP54_00958 26cd9e3ba7029b0a03b9f10ef4f75fbc 854 SUPERFAMILY SSF55486 201 447 1.79E-74 T 14-10-2018 PhaeoP54_00958 26cd9e3ba7029b0a03b9f10ef4f75fbc 854 SUPERFAMILY SSF63737 10 190 2.88E-38 T 14-10-2018 PhaeoP54_00958 26cd9e3ba7029b0a03b9f10ef4f75fbc 854 Pfam PF01433 Peptidase family M1 domain 205 433 3.1E-54 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 PhaeoP54_00958 26cd9e3ba7029b0a03b9f10ef4f75fbc 854 Pfam PF11940 Domain of unknown function (DUF3458) Ig-like fold 441 532 6.4E-31 T 14-10-2018 IPR035414 Peptidase M1, alanyl aminopeptidase, Ig-like fold PhaeoP54_00958 26cd9e3ba7029b0a03b9f10ef4f75fbc 854 Gene3D G3DSA:2.60.40.1730 20 191 8.8E-58 T 14-10-2018 PhaeoP54_00958 26cd9e3ba7029b0a03b9f10ef4f75fbc 854 Pfam PF17432 Domain of unknown function (DUF3458_C) ARM repeats 537 853 2.9E-103 T 14-10-2018 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal PhaeoP54_00958 26cd9e3ba7029b0a03b9f10ef4f75fbc 854 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 131 146 3.2E-9 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 PhaeoP54_00958 26cd9e3ba7029b0a03b9f10ef4f75fbc 854 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 173 188 3.2E-9 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 PhaeoP54_00958 26cd9e3ba7029b0a03b9f10ef4f75fbc 854 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 310 322 3.2E-9 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 PhaeoP54_00958 26cd9e3ba7029b0a03b9f10ef4f75fbc 854 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 255 265 3.2E-9 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 PhaeoP54_00958 26cd9e3ba7029b0a03b9f10ef4f75fbc 854 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 291 306 3.2E-9 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 PhaeoP54_00958 26cd9e3ba7029b0a03b9f10ef4f75fbc 854 Gene3D G3DSA:1.10.390.10 277 440 1.8E-59 T 14-10-2018 IPR027268 Peptidase M4/M1, CTD superfamily PhaeoP54_00958 26cd9e3ba7029b0a03b9f10ef4f75fbc 854 TIGRFAM TIGR02414 pepN_proteo: aminopeptidase N 17 851 0.0 T 14-10-2018 IPR012779 Peptidase M1, alanyl aminopeptidase GO:0008270 PhaeoP54_00620 3185cec1b7914676fe6d4384676656b0 402 Hamap MF_02062 Sodium/glutamate symporter [gltS]. 5 402 21.744 T 14-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 PhaeoP54_00620 3185cec1b7914676fe6d4384676656b0 402 Pfam PF03616 Sodium/glutamate symporter 12 372 5.0E-104 T 14-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 PhaeoP54_00620 3185cec1b7914676fe6d4384676656b0 402 TIGRFAM TIGR00210 gltS: sodium/glutamate symporter 15 401 6.5E-120 T 14-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 PhaeoP54_01909 b55497087c202715310b7c8990b3a0dc 275 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 73 262 5.0E-11 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PhaeoP54_01909 b55497087c202715310b7c8990b3a0dc 275 Gene3D G3DSA:1.10.3720.10 6 272 1.7E-44 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_01909 b55497087c202715310b7c8990b3a0dc 275 SUPERFAMILY SSF161098 10 267 9.16E-43 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_02653 5ef1a11f08dd35da9343256bd4a4cee9 185 Pfam PF04542 Sigma-70 region 2 28 96 4.8E-15 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 PhaeoP54_02653 5ef1a11f08dd35da9343256bd4a4cee9 185 Gene3D G3DSA:1.10.10.10 92 181 7.6E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_02653 5ef1a11f08dd35da9343256bd4a4cee9 185 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 24 179 9.2E-22 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 PhaeoP54_02653 5ef1a11f08dd35da9343256bd4a4cee9 185 SUPERFAMILY SSF88659 119 180 9.91E-11 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like PhaeoP54_02653 5ef1a11f08dd35da9343256bd4a4cee9 185 Pfam PF08281 Sigma-70, region 4 124 175 7.9E-11 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PhaeoP54_02653 5ef1a11f08dd35da9343256bd4a4cee9 185 Gene3D G3DSA:1.10.1740.10 12 91 5.3E-24 T 14-10-2018 PhaeoP54_02653 5ef1a11f08dd35da9343256bd4a4cee9 185 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 50 82 - T 14-10-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PhaeoP54_02653 5ef1a11f08dd35da9343256bd4a4cee9 185 SUPERFAMILY SSF88946 12 110 1.49E-19 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 PhaeoP54_02891 67ec731cefdf21cfa4beac6668d23093 297 Gene3D G3DSA:3.40.1500.10 1 297 2.5E-97 T 14-10-2018 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 PhaeoP54_02891 67ec731cefdf21cfa4beac6668d23093 297 SUPERFAMILY SSF102886 4 296 2.62E-107 T 14-10-2018 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 PhaeoP54_02891 67ec731cefdf21cfa4beac6668d23093 297 PIRSF PIRSF000166 2 297 8.1E-107 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 PhaeoP54_02891 67ec731cefdf21cfa4beac6668d23093 297 Pfam PF01218 Coproporphyrinogen III oxidase 14 296 1.7E-89 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 PhaeoP54_02891 67ec731cefdf21cfa4beac6668d23093 297 PRINTS PR00073 Coprogen oxidase signature 145 167 1.7E-58 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 PhaeoP54_02891 67ec731cefdf21cfa4beac6668d23093 297 PRINTS PR00073 Coprogen oxidase signature 254 281 1.7E-58 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 PhaeoP54_02891 67ec731cefdf21cfa4beac6668d23093 297 PRINTS PR00073 Coprogen oxidase signature 67 88 1.7E-58 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 PhaeoP54_02891 67ec731cefdf21cfa4beac6668d23093 297 PRINTS PR00073 Coprogen oxidase signature 182 211 1.7E-58 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 PhaeoP54_02891 67ec731cefdf21cfa4beac6668d23093 297 PRINTS PR00073 Coprogen oxidase signature 282 297 1.7E-58 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 PhaeoP54_02891 67ec731cefdf21cfa4beac6668d23093 297 PRINTS PR00073 Coprogen oxidase signature 115 139 1.7E-58 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 PhaeoP54_00520 d4e3cc9966d39ad09b9f9f21e5ab3336 475 TIGRFAM TIGR03173 pbuX: xanthine permease 27 449 8.5E-127 T 14-10-2018 IPR017588 Uric acid permease UacT-like GO:0016021|GO:0022857|GO:0055085 PhaeoP54_00520 d4e3cc9966d39ad09b9f9f21e5ab3336 475 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 19 447 1.8E-94 T 14-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 PhaeoP54_00520 d4e3cc9966d39ad09b9f9f21e5ab3336 475 Pfam PF00860 Permease family 23 412 1.0E-82 T 14-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 PhaeoP54_03266 34b5dde9b190f8e22b2fd146ae34ca9c 1053 SMART SM00843 988 1053 2.7E-38 T 14-10-2018 IPR018541 FtsK gamma domain PhaeoP54_03266 34b5dde9b190f8e22b2fd146ae34ca9c 1053 SUPERFAMILY SSF52540 647 951 5.65E-49 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_03266 34b5dde9b190f8e22b2fd146ae34ca9c 1053 Gene3D G3DSA:3.40.50.300 658 965 6.0E-112 T 14-10-2018 PhaeoP54_03266 34b5dde9b190f8e22b2fd146ae34ca9c 1053 Pfam PF01580 FtsK/SpoIIIE family 661 880 6.4E-65 T 14-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 PhaeoP54_03266 34b5dde9b190f8e22b2fd146ae34ca9c 1053 Pfam PF09397 Ftsk gamma domain 990 1050 8.4E-27 T 14-10-2018 IPR018541 FtsK gamma domain PhaeoP54_03266 34b5dde9b190f8e22b2fd146ae34ca9c 1053 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 21 178 9.8E-24 T 14-10-2018 IPR025199 DNA translocase FtsK, 4TM region PhaeoP54_03266 34b5dde9b190f8e22b2fd146ae34ca9c 1053 SUPERFAMILY SSF46785 988 1052 3.33E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_03266 34b5dde9b190f8e22b2fd146ae34ca9c 1053 SMART SM00382 696 901 9.2E-4 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_03266 34b5dde9b190f8e22b2fd146ae34ca9c 1053 Gene3D G3DSA:3.30.980.40 553 657 9.0E-30 T 14-10-2018 PhaeoP54_03266 34b5dde9b190f8e22b2fd146ae34ca9c 1053 Gene3D G3DSA:1.10.10.10 984 1049 1.1E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_01222 ae4c39910012a543c2e32c81b86817be 158 SUPERFAMILY SSF46626 11 156 1.83E-29 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PhaeoP54_01222 ae4c39910012a543c2e32c81b86817be 158 TIGRFAM TIGR04485 thiosulf_SoxX: sulfur oxidation c-type cytochrome SoxX 57 155 1.2E-27 T 14-10-2018 IPR030999 Sulfur oxidation c-type cytochrome SoxX PhaeoP54_01222 ae4c39910012a543c2e32c81b86817be 158 Gene3D G3DSA:1.10.760.10 20 157 4.5E-51 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PhaeoP54_01222 ae4c39910012a543c2e32c81b86817be 158 Pfam PF00034 Cytochrome c 48 156 1.9E-12 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PhaeoP54_00525 fbac40e1958dd4b13dc6b4fd50e7b0ae 256 Gene3D G3DSA:1.10.10.10 1 76 4.7E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_00525 fbac40e1958dd4b13dc6b4fd50e7b0ae 256 Pfam PF09339 IclR helix-turn-helix domain 13 62 1.9E-13 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 PhaeoP54_00525 fbac40e1958dd4b13dc6b4fd50e7b0ae 256 SMART SM00346 9 97 1.6E-12 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 PhaeoP54_00525 fbac40e1958dd4b13dc6b4fd50e7b0ae 256 SUPERFAMILY SSF55781 78 249 1.11E-29 T 14-10-2018 PhaeoP54_00525 fbac40e1958dd4b13dc6b4fd50e7b0ae 256 SUPERFAMILY SSF46785 11 75 1.06E-8 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_00525 fbac40e1958dd4b13dc6b4fd50e7b0ae 256 Pfam PF01614 Bacterial transcriptional regulator 127 248 1.4E-17 T 14-10-2018 IPR014757 Transcription regulator IclR, C-terminal PhaeoP54_00525 fbac40e1958dd4b13dc6b4fd50e7b0ae 256 Gene3D G3DSA:3.30.450.40 77 254 1.1E-32 T 14-10-2018 IPR029016 GAF-like domain superfamily PhaeoP54_02885 008ef4f4541597d3f1272a3f29022088 726 SUPERFAMILY SSF56784 415 712 1.02E-52 T 14-10-2018 IPR036412 HAD-like superfamily PhaeoP54_02885 008ef4f4541597d3f1272a3f29022088 726 SUPERFAMILY SSF81665 167 701 1.31E-15 T 14-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 PhaeoP54_02885 008ef4f4541597d3f1272a3f29022088 726 Gene3D G3DSA:3.40.50.1000 397 664 1.3E-87 T 14-10-2018 IPR023214 HAD superfamily PhaeoP54_02885 008ef4f4541597d3f1272a3f29022088 726 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 165 714 1.4E-183 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 PhaeoP54_02885 008ef4f4541597d3f1272a3f29022088 726 SUPERFAMILY SSF81653 218 315 6.54E-25 T 14-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 PhaeoP54_02885 008ef4f4541597d3f1272a3f29022088 726 ProSitePatterns PS01229 Hypothetical cof family signature 2. 612 634 - T 14-10-2018 PhaeoP54_02885 008ef4f4541597d3f1272a3f29022088 726 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 635 647 4.9E-28 T 14-10-2018 PhaeoP54_02885 008ef4f4541597d3f1272a3f29022088 726 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 612 631 4.9E-28 T 14-10-2018 PhaeoP54_02885 008ef4f4541597d3f1272a3f29022088 726 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 416 430 4.9E-28 T 14-10-2018 PhaeoP54_02885 008ef4f4541597d3f1272a3f29022088 726 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 539 550 4.9E-28 T 14-10-2018 PhaeoP54_02885 008ef4f4541597d3f1272a3f29022088 726 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 561 571 4.9E-28 T 14-10-2018 PhaeoP54_02885 008ef4f4541597d3f1272a3f29022088 726 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 265 279 4.9E-28 T 14-10-2018 PhaeoP54_02885 008ef4f4541597d3f1272a3f29022088 726 PRINTS PR00941 Cadmium-transporting ATPase signature 300 314 1.6E-12 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 PhaeoP54_02885 008ef4f4541597d3f1272a3f29022088 726 PRINTS PR00941 Cadmium-transporting ATPase signature 281 297 1.6E-12 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 PhaeoP54_02885 008ef4f4541597d3f1272a3f29022088 726 PRINTS PR00941 Cadmium-transporting ATPase signature 200 220 1.6E-12 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 PhaeoP54_02885 008ef4f4541597d3f1272a3f29022088 726 PRINTS PR00941 Cadmium-transporting ATPase signature 11 20 1.6E-12 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 PhaeoP54_02885 008ef4f4541597d3f1272a3f29022088 726 PRINTS PR00941 Cadmium-transporting ATPase signature 22 43 1.6E-12 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 PhaeoP54_02885 008ef4f4541597d3f1272a3f29022088 726 Gene3D G3DSA:2.70.150.20 204 319 7.5E-33 T 14-10-2018 PhaeoP54_02885 008ef4f4541597d3f1272a3f29022088 726 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 165 715 1.6E-157 T 14-10-2018 PhaeoP54_02885 008ef4f4541597d3f1272a3f29022088 726 SUPERFAMILY SSF55008 7 74 4.06E-14 T 14-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 PhaeoP54_02885 008ef4f4541597d3f1272a3f29022088 726 Gene3D G3DSA:3.40.1110.10 427 546 1.3E-87 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 PhaeoP54_02885 008ef4f4541597d3f1272a3f29022088 726 Pfam PF00702 haloacid dehalogenase-like hydrolase 414 625 1.7E-40 T 14-10-2018 PhaeoP54_02885 008ef4f4541597d3f1272a3f29022088 726 Pfam PF00403 Heavy-metal-associated domain 12 71 2.5E-9 T 14-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 PhaeoP54_02885 008ef4f4541597d3f1272a3f29022088 726 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 164 714 1.4E-127 T 14-10-2018 PhaeoP54_02885 008ef4f4541597d3f1272a3f29022088 726 Gene3D G3DSA:3.30.70.100 6 77 1.0E-14 T 14-10-2018 PhaeoP54_02885 008ef4f4541597d3f1272a3f29022088 726 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 188 691 1.1E-79 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 PhaeoP54_02885 008ef4f4541597d3f1272a3f29022088 726 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 418 424 - T 14-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 PhaeoP54_02885 008ef4f4541597d3f1272a3f29022088 726 Pfam PF00122 E1-E2 ATPase 216 396 6.6E-51 T 14-10-2018 PhaeoP54_01733 a680b7a3b85b338c36c79de1bc83f183 464 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 428 448 5.6E-65 T 14-10-2018 PhaeoP54_01733 a680b7a3b85b338c36c79de1bc83f183 464 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 305 312 5.6E-65 T 14-10-2018 PhaeoP54_01733 a680b7a3b85b338c36c79de1bc83f183 464 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 341 362 5.6E-65 T 14-10-2018 PhaeoP54_01733 a680b7a3b85b338c36c79de1bc83f183 464 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 39 54 5.6E-65 T 14-10-2018 PhaeoP54_01733 a680b7a3b85b338c36c79de1bc83f183 464 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 5.6E-65 T 14-10-2018 PhaeoP54_01733 a680b7a3b85b338c36c79de1bc83f183 464 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 263 277 5.6E-65 T 14-10-2018 PhaeoP54_01733 a680b7a3b85b338c36c79de1bc83f183 464 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 139 148 5.6E-65 T 14-10-2018 PhaeoP54_01733 a680b7a3b85b338c36c79de1bc83f183 464 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 175 200 5.6E-65 T 14-10-2018 PhaeoP54_01733 a680b7a3b85b338c36c79de1bc83f183 464 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 406 421 5.6E-65 T 14-10-2018 PhaeoP54_01733 a680b7a3b85b338c36c79de1bc83f183 464 PIRSF PIRSF000350 1 463 2.0E-79 T 14-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 PhaeoP54_01733 a680b7a3b85b338c36c79de1bc83f183 464 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 325 6.0E-63 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PhaeoP54_01733 a680b7a3b85b338c36c79de1bc83f183 464 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 262 278 2.7E-37 T 14-10-2018 PhaeoP54_01733 a680b7a3b85b338c36c79de1bc83f183 464 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 2.7E-37 T 14-10-2018 PhaeoP54_01733 a680b7a3b85b338c36c79de1bc83f183 464 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 136 154 2.7E-37 T 14-10-2018 PhaeoP54_01733 a680b7a3b85b338c36c79de1bc83f183 464 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 290 312 2.7E-37 T 14-10-2018 PhaeoP54_01733 a680b7a3b85b338c36c79de1bc83f183 464 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 175 193 2.7E-37 T 14-10-2018 PhaeoP54_01733 a680b7a3b85b338c36c79de1bc83f183 464 Gene3D G3DSA:3.50.50.60 6 330 1.1E-106 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PhaeoP54_01733 a680b7a3b85b338c36c79de1bc83f183 464 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 40 50 - T 14-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 PhaeoP54_01733 a680b7a3b85b338c36c79de1bc83f183 464 SUPERFAMILY SSF51905 3 335 1.94E-66 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PhaeoP54_01733 a680b7a3b85b338c36c79de1bc83f183 464 Gene3D G3DSA:3.30.390.30 344 464 4.6E-41 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 PhaeoP54_01733 a680b7a3b85b338c36c79de1bc83f183 464 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 345 453 4.8E-36 T 14-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 PhaeoP54_01733 a680b7a3b85b338c36c79de1bc83f183 464 SUPERFAMILY SSF55424 344 463 1.89E-38 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 PhaeoP54_01733 a680b7a3b85b338c36c79de1bc83f183 464 Gene3D G3DSA:3.50.50.60 148 269 1.1E-106 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PhaeoP54_01733 a680b7a3b85b338c36c79de1bc83f183 464 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 6 464 2.2E-170 T 14-10-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 PhaeoP54_01538 0575f0c67f9757d76cabe17b936ae276 344 Pfam PF01926 50S ribosome-binding GTPase 161 280 1.2E-25 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 PhaeoP54_01538 0575f0c67f9757d76cabe17b936ae276 344 Gene3D G3DSA:2.70.210.12 1 158 2.2E-57 T 14-10-2018 IPR036726 GTP1/OBG domain superfamily PhaeoP54_01538 0575f0c67f9757d76cabe17b936ae276 344 Hamap MF_01454 GTPase Obg [obg]. 2 327 45.937 T 14-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 PhaeoP54_01538 0575f0c67f9757d76cabe17b936ae276 344 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 161 318 1.3E-12 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 PhaeoP54_01538 0575f0c67f9757d76cabe17b936ae276 344 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 3 325 1.5E-136 T 14-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 PhaeoP54_01538 0575f0c67f9757d76cabe17b936ae276 344 SUPERFAMILY SSF52540 151 333 7.88E-50 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_01538 0575f0c67f9757d76cabe17b936ae276 344 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 183 201 3.1E-34 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 PhaeoP54_01538 0575f0c67f9757d76cabe17b936ae276 344 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 227 245 3.1E-34 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 PhaeoP54_01538 0575f0c67f9757d76cabe17b936ae276 344 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 162 182 3.1E-34 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 PhaeoP54_01538 0575f0c67f9757d76cabe17b936ae276 344 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 210 225 3.1E-34 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 PhaeoP54_01538 0575f0c67f9757d76cabe17b936ae276 344 Pfam PF01018 GTP1/OBG 5 158 2.2E-58 T 14-10-2018 IPR006169 GTP1/OBG domain PhaeoP54_01538 0575f0c67f9757d76cabe17b936ae276 344 Gene3D G3DSA:3.40.50.300 160 343 4.2E-50 T 14-10-2018 PhaeoP54_01538 0575f0c67f9757d76cabe17b936ae276 344 SUPERFAMILY SSF82051 2 158 1.83E-55 T 14-10-2018 IPR036726 GTP1/OBG domain superfamily PhaeoP54_01538 0575f0c67f9757d76cabe17b936ae276 344 PIRSF PIRSF002401 1 344 8.4E-130 T 14-10-2018 IPR035101 GTP-binding protein, Obg-type PhaeoP54_02580 a94936dc808b58351f1ee4457ae74c6d 436 Gene3D G3DSA:3.40.50.12780 3 332 2.3E-135 T 14-10-2018 PhaeoP54_02580 a94936dc808b58351f1ee4457ae74c6d 436 TIGRFAM TIGR02155 PA_CoA_ligase: phenylacetate-CoA ligase 15 433 6.8E-216 T 14-10-2018 IPR011880 Phenylacetate-CoA ligase GO:0010124|GO:0047475 KEGG: 00360+6.2.1.30|MetaCyc: PWY-1341|MetaCyc: PWY-6318|MetaCyc: PWY-7716 PhaeoP54_02580 a94936dc808b58351f1ee4457ae74c6d 436 Pfam PF14535 AMP-binding enzyme C-terminal domain 339 433 2.2E-25 T 14-10-2018 IPR028154 AMP-dependent ligase, C-terminal PhaeoP54_02580 a94936dc808b58351f1ee4457ae74c6d 436 SUPERFAMILY SSF56801 28 396 2.75E-63 T 14-10-2018 PhaeoP54_02580 a94936dc808b58351f1ee4457ae74c6d 436 Pfam PF00501 AMP-binding enzyme 86 293 3.5E-16 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 PhaeoP54_02580 a94936dc808b58351f1ee4457ae74c6d 436 PIRSF PIRSF006444 5 435 1.3E-209 T 14-10-2018 IPR011880 Phenylacetate-CoA ligase GO:0010124|GO:0047475 KEGG: 00360+6.2.1.30|MetaCyc: PWY-1341|MetaCyc: PWY-6318|MetaCyc: PWY-7716 PhaeoP54_02580 a94936dc808b58351f1ee4457ae74c6d 436 Gene3D G3DSA:3.30.300.30 333 434 8.2E-28 T 14-10-2018 PhaeoP54_01315 93db5d3261849edd553e7ef40e98ee20 233 Pfam PF02310 B12 binding domain 105 216 1.4E-23 T 14-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 PhaeoP54_01315 93db5d3261849edd553e7ef40e98ee20 233 Gene3D G3DSA:3.40.50.280 98 232 3.3E-43 T 14-10-2018 PhaeoP54_01315 93db5d3261849edd553e7ef40e98ee20 233 Pfam PF02607 B12 binding domain 20 92 8.1E-16 T 14-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 PhaeoP54_01315 93db5d3261849edd553e7ef40e98ee20 233 Gene3D G3DSA:1.10.1240.10 3 97 4.8E-22 T 14-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 PhaeoP54_01315 93db5d3261849edd553e7ef40e98ee20 233 SUPERFAMILY SSF47644 14 97 4.71E-21 T 14-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 PhaeoP54_01315 93db5d3261849edd553e7ef40e98ee20 233 SMART SM01018 16 99 6.9E-26 T 14-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 PhaeoP54_01315 93db5d3261849edd553e7ef40e98ee20 233 SUPERFAMILY SSF52242 84 229 4.32E-44 T 14-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 PhaeoP54_00801 b02a41ea231820ab0ae0f481358da52b 273 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 6.2E-18 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PhaeoP54_00801 b02a41ea231820ab0ae0f481358da52b 273 Gene3D G3DSA:3.40.190.10 190 239 1.2E-9 T 14-10-2018 PhaeoP54_00801 b02a41ea231820ab0ae0f481358da52b 273 Gene3D G3DSA:3.40.190.10 240 266 1.2E-9 T 14-10-2018 PhaeoP54_00801 b02a41ea231820ab0ae0f481358da52b 273 Gene3D G3DSA:1.10.10.10 3 90 1.0E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_00801 b02a41ea231820ab0ae0f481358da52b 273 Gene3D G3DSA:3.40.190.10 91 161 5.5E-17 T 14-10-2018 PhaeoP54_00801 b02a41ea231820ab0ae0f481358da52b 273 Gene3D G3DSA:3.40.190.10 162 177 5.5E-17 T 14-10-2018 PhaeoP54_00801 b02a41ea231820ab0ae0f481358da52b 273 SUPERFAMILY SSF46785 4 84 3.27E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_00801 b02a41ea231820ab0ae0f481358da52b 273 Pfam PF03466 LysR substrate binding domain 89 268 7.7E-25 T 14-10-2018 IPR005119 LysR, substrate-binding PhaeoP54_00801 b02a41ea231820ab0ae0f481358da52b 273 SUPERFAMILY SSF53850 90 269 6.52E-27 T 14-10-2018 PhaeoP54_03821 ed49b5296c6d3281016eda663a7aa0d9 660 Gene3D G3DSA:3.90.1530.30 27 81 2.4E-8 T 14-10-2018 PhaeoP54_03821 ed49b5296c6d3281016eda663a7aa0d9 660 SUPERFAMILY SSF109709 104 200 2.09E-15 T 14-10-2018 PhaeoP54_03821 ed49b5296c6d3281016eda663a7aa0d9 660 SUPERFAMILY SSF110849 9 111 8.37E-14 T 14-10-2018 IPR036086 ParB/Sulfiredoxin superfamily PhaeoP54_03821 ed49b5296c6d3281016eda663a7aa0d9 660 SMART SM00470 8 111 2.7E-11 T 14-10-2018 IPR003115 ParB/Sulfiredoxin PhaeoP54_03821 ed49b5296c6d3281016eda663a7aa0d9 660 Pfam PF02195 ParB-like nuclease domain 10 111 1.2E-13 T 14-10-2018 IPR003115 ParB/Sulfiredoxin PhaeoP54_03821 ed49b5296c6d3281016eda663a7aa0d9 660 Gene3D G3DSA:1.10.10.2830 101 212 3.7E-13 T 14-10-2018 PhaeoP54_02495 8b5a3052e88b8b36e683a800cbd8ef35 699 SUPERFAMILY SSF56935 19 699 1.97E-126 T 14-10-2018 PhaeoP54_02495 8b5a3052e88b8b36e683a800cbd8ef35 699 Gene3D G3DSA:2.40.170.20 169 699 3.2E-128 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily PhaeoP54_02495 8b5a3052e88b8b36e683a800cbd8ef35 699 Pfam PF07715 TonB-dependent Receptor Plug Domain 59 158 1.6E-18 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain PhaeoP54_02495 8b5a3052e88b8b36e683a800cbd8ef35 699 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 60 699 8.0E-104 T 14-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 PhaeoP54_02495 8b5a3052e88b8b36e683a800cbd8ef35 699 Pfam PF00593 TonB dependent receptor 265 698 1.5E-52 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel PhaeoP54_02495 8b5a3052e88b8b36e683a800cbd8ef35 699 Gene3D G3DSA:2.170.130.10 41 168 3.1E-30 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily PhaeoP54_02495 8b5a3052e88b8b36e683a800cbd8ef35 699 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 682 699 - T 14-10-2018 IPR010917 TonB-dependent receptor, conserved site PhaeoP54_01792 0c8547c158dbded031245c274cd98ec4 191 Pfam PF04264 YceI-like domain 25 187 1.4E-36 T 14-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like PhaeoP54_01792 0c8547c158dbded031245c274cd98ec4 191 Gene3D G3DSA:2.40.128.110 23 190 9.0E-48 T 14-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily PhaeoP54_01792 0c8547c158dbded031245c274cd98ec4 191 SUPERFAMILY SSF101874 22 190 5.36E-52 T 14-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily PhaeoP54_01792 0c8547c158dbded031245c274cd98ec4 191 SMART SM00867 24 188 1.1E-61 T 14-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like PhaeoP54_01184 7dd547e24dd6970a526c7893418bc46d 403 SUPERFAMILY SSF53901 1 274 1.11E-61 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 PhaeoP54_01184 7dd547e24dd6970a526c7893418bc46d 403 PIRSF PIRSF000429 1 403 2.2E-108 T 14-10-2018 IPR002155 Thiolase GO:0016747 PhaeoP54_01184 7dd547e24dd6970a526c7893418bc46d 403 Pfam PF00108 Thiolase, N-terminal domain 5 228 1.5E-47 T 14-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 PhaeoP54_01184 7dd547e24dd6970a526c7893418bc46d 403 SUPERFAMILY SSF53901 281 402 3.77E-38 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 PhaeoP54_01184 7dd547e24dd6970a526c7893418bc46d 403 Gene3D G3DSA:3.40.47.10 125 398 1.2E-133 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 PhaeoP54_01184 7dd547e24dd6970a526c7893418bc46d 403 ProSitePatterns PS00737 Thiolases signature 2. 349 365 - T 14-10-2018 IPR020613 Thiolase, conserved site GO:0016747 PhaeoP54_01184 7dd547e24dd6970a526c7893418bc46d 403 Gene3D G3DSA:3.40.47.10 6 300 1.2E-133 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 PhaeoP54_01184 7dd547e24dd6970a526c7893418bc46d 403 Pfam PF02803 Thiolase, C-terminal domain 280 402 8.5E-44 T 14-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 PhaeoP54_01184 7dd547e24dd6970a526c7893418bc46d 403 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 401 1.5E-123 T 14-10-2018 IPR002155 Thiolase GO:0016747 PhaeoP54_01184 7dd547e24dd6970a526c7893418bc46d 403 ProSitePatterns PS00099 Thiolases active site. 384 397 - T 14-10-2018 IPR020610 Thiolase, active site GO:0016747 PhaeoP54_01184 7dd547e24dd6970a526c7893418bc46d 403 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 87 105 - T 14-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 PhaeoP54_02860 655b940dc17b03d3f86e07205f6039d8 729 SUPERFAMILY SSF50969 92 409 7.06E-20 T 14-10-2018 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like PhaeoP54_02860 655b940dc17b03d3f86e07205f6039d8 729 SUPERFAMILY SSF63825 336 575 8.11E-7 T 14-10-2018 PhaeoP54_02860 655b940dc17b03d3f86e07205f6039d8 729 Gene3D G3DSA:2.130.10.10 18 331 2.5E-8 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 PhaeoP54_02860 655b940dc17b03d3f86e07205f6039d8 729 Pfam PF13449 Esterase-like activity of phytase 444 706 1.8E-48 T 14-10-2018 IPR027372 Phytase-like domain PhaeoP54_03910 2187280d6ec8aaa20a71cded008270db 250 Pfam PF06629 MltA-interacting protein MipA 34 250 3.4E-36 T 14-10-2018 IPR010583 MltA-interacting MipA PhaeoP54_00293 9c1c4f60c33c8f73c93c5a6e27f065c0 300 SUPERFAMILY SSF53927 28 278 2.65E-73 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 PhaeoP54_00293 9c1c4f60c33c8f73c93c5a6e27f065c0 300 Gene3D G3DSA:3.40.140.10 133 285 1.4E-40 T 14-10-2018 PhaeoP54_00293 9c1c4f60c33c8f73c93c5a6e27f065c0 300 Gene3D G3DSA:3.10.20.10 48 129 3.9E-9 T 14-10-2018 PhaeoP54_00293 9c1c4f60c33c8f73c93c5a6e27f065c0 300 Hamap MF_00187 Sulfur carrier protein FdhD [fdhD]. 19 278 26.369 T 14-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 PhaeoP54_00293 9c1c4f60c33c8f73c93c5a6e27f065c0 300 PIRSF PIRSF015626 14 282 1.5E-80 T 14-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 PhaeoP54_00293 9c1c4f60c33c8f73c93c5a6e27f065c0 300 Pfam PF02634 FdhD/NarQ family 46 277 3.2E-70 T 14-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 PhaeoP54_00467 94d6471a12faeb44fd8b170b6d9482e1 170 Gene3D G3DSA:2.40.160.20 40 168 1.2E-10 T 14-10-2018 PhaeoP54_00467 94d6471a12faeb44fd8b170b6d9482e1 170 Pfam PF09411 Lipid A 3-O-deacylase (PagL) 51 166 7.4E-20 T 14-10-2018 IPR018550 Lipid A 3-O-deacylase-related PhaeoP54_02716 3f64af8ac26b766937e1a3a7ccec66ef 316 Pfam PF02625 XdhC and CoxI family 14 72 1.1E-17 T 14-10-2018 IPR003777 XdhC- CoxI PhaeoP54_02716 3f64af8ac26b766937e1a3a7ccec66ef 316 Pfam PF13478 XdhC Rossmann domain 160 301 1.1E-29 T 14-10-2018 IPR027051 XdhC Rossmann domain PhaeoP54_02716 3f64af8ac26b766937e1a3a7ccec66ef 316 Gene3D G3DSA:3.40.50.720 159 305 1.6E-25 T 14-10-2018 PhaeoP54_02716 3f64af8ac26b766937e1a3a7ccec66ef 316 TIGRFAM TIGR02964 xanthine_xdhC: xanthine dehydrogenase accessory protein XdhC 19 302 2.6E-84 T 14-10-2018 IPR014308 Xanthine dehydrogenase accessory protein XdhC PhaeoP54_00420 d5088b24791ca2d3fb84e724817b0ad4 221 Gene3D G3DSA:1.10.357.10 24 217 8.4E-17 T 14-10-2018 PhaeoP54_00420 d5088b24791ca2d3fb84e724817b0ad4 221 Pfam PF00440 Bacterial regulatory proteins, tetR family 29 74 1.8E-11 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PhaeoP54_00420 d5088b24791ca2d3fb84e724817b0ad4 221 SUPERFAMILY SSF46689 22 80 2.32E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PhaeoP54_00420 d5088b24791ca2d3fb84e724817b0ad4 221 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 49 72 4.6E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PhaeoP54_00420 d5088b24791ca2d3fb84e724817b0ad4 221 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 28 41 4.6E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PhaeoP54_00850 9b775f378e280e54d3c925b084302a90 662 Gene3D G3DSA:1.10.10.10 501 576 5.0E-32 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_00850 9b775f378e280e54d3c925b084302a90 662 Pfam PF04546 Sigma-70, non-essential region 156 396 9.6E-37 T 14-10-2018 IPR007631 RNA polymerase sigma factor 70, non-essential domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PhaeoP54_00850 9b775f378e280e54d3c925b084302a90 662 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 452 465 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 PhaeoP54_00850 9b775f378e280e54d3c925b084302a90 662 PRINTS PR00046 Major sigma-70 factor signature 636 647 5.7E-31 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 PhaeoP54_00850 9b775f378e280e54d3c925b084302a90 662 PRINTS PR00046 Major sigma-70 factor signature 476 484 5.7E-31 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 PhaeoP54_00850 9b775f378e280e54d3c925b084302a90 662 PRINTS PR00046 Major sigma-70 factor signature 600 612 5.7E-31 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 PhaeoP54_00850 9b775f378e280e54d3c925b084302a90 662 PRINTS PR00046 Major sigma-70 factor signature 621 636 5.7E-31 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 PhaeoP54_00850 9b775f378e280e54d3c925b084302a90 662 PRINTS PR00046 Major sigma-70 factor signature 452 465 5.7E-31 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 PhaeoP54_00850 9b775f378e280e54d3c925b084302a90 662 Gene3D G3DSA:1.10.601.10 129 497 8.3E-117 T 14-10-2018 PhaeoP54_00850 9b775f378e280e54d3c925b084302a90 662 Pfam PF04539 Sigma-70 region 3 507 582 1.6E-29 T 14-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 PhaeoP54_00850 9b775f378e280e54d3c925b084302a90 662 Pfam PF04545 Sigma-70, region 4 596 649 1.7E-18 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 PhaeoP54_00850 9b775f378e280e54d3c925b084302a90 662 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 424 649 9.2E-39 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 PhaeoP54_00850 9b775f378e280e54d3c925b084302a90 662 SUPERFAMILY SSF88659 501 574 1.22E-20 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like PhaeoP54_00850 9b775f378e280e54d3c925b084302a90 662 Pfam PF03979 Sigma-70 factor, region 1.1 23 91 2.2E-22 T 14-10-2018 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 PhaeoP54_00850 9b775f378e280e54d3c925b084302a90 662 SUPERFAMILY SSF88946 131 495 9.42E-93 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 PhaeoP54_00850 9b775f378e280e54d3c925b084302a90 662 Gene3D G3DSA:1.10.220.120 21 82 4.3E-22 T 14-10-2018 PhaeoP54_00850 9b775f378e280e54d3c925b084302a90 662 Gene3D G3DSA:1.10.10.10 578 662 2.5E-36 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_00850 9b775f378e280e54d3c925b084302a90 662 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 424 660 3.9E-120 T 14-10-2018 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 PhaeoP54_00850 9b775f378e280e54d3c925b084302a90 662 SUPERFAMILY SSF88659 558 660 8.94E-26 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like PhaeoP54_00850 9b775f378e280e54d3c925b084302a90 662 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 7 661 45.757 T 14-10-2018 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 PhaeoP54_00850 9b775f378e280e54d3c925b084302a90 662 Pfam PF04542 Sigma-70 region 2 428 497 1.9E-21 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 PhaeoP54_00850 9b775f378e280e54d3c925b084302a90 662 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 621 647 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 PhaeoP54_00850 9b775f378e280e54d3c925b084302a90 662 Pfam PF00140 Sigma-70 factor, region 1.2 114 145 2.3E-13 T 14-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PhaeoP54_03080 cba7cdf3a2715b549432c3964aca58b9 570 Gene3D G3DSA:3.30.565.10 411 570 2.4E-35 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PhaeoP54_03080 cba7cdf3a2715b549432c3964aca58b9 570 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 453 566 2.0E-19 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PhaeoP54_03080 cba7cdf3a2715b549432c3964aca58b9 570 SUPERFAMILY SSF55874 396 570 1.96E-37 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PhaeoP54_03080 cba7cdf3a2715b549432c3964aca58b9 570 PRINTS PR00344 Bacterial sensor protein C-terminal signature 489 503 2.6E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PhaeoP54_03080 cba7cdf3a2715b549432c3964aca58b9 570 PRINTS PR00344 Bacterial sensor protein C-terminal signature 507 517 2.6E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PhaeoP54_03080 cba7cdf3a2715b549432c3964aca58b9 570 PRINTS PR00344 Bacterial sensor protein C-terminal signature 523 541 2.6E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PhaeoP54_03080 cba7cdf3a2715b549432c3964aca58b9 570 Gene3D G3DSA:1.10.287.130 347 402 3.1E-11 T 14-10-2018 PhaeoP54_03080 cba7cdf3a2715b549432c3964aca58b9 570 SUPERFAMILY SSF47384 324 405 3.92E-15 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 PhaeoP54_03080 cba7cdf3a2715b549432c3964aca58b9 570 Pfam PF13755 Sensor N-terminal transmembrane domain 38 103 2.2E-28 T 14-10-2018 IPR025908 Sensor N-terminal transmembrane domain PhaeoP54_03080 cba7cdf3a2715b549432c3964aca58b9 570 Gene3D G3DSA:1.20.1480.50 244 346 2.4E-6 T 14-10-2018 PhaeoP54_03080 cba7cdf3a2715b549432c3964aca58b9 570 SMART SM00388 341 406 3.7E-16 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PhaeoP54_03080 cba7cdf3a2715b549432c3964aca58b9 570 Pfam PF00512 His Kinase A (phospho-acceptor) domain 342 405 2.9E-14 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PhaeoP54_03080 cba7cdf3a2715b549432c3964aca58b9 570 SMART SM00387 452 561 2.0E-27 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PhaeoP54_00926 7e9528892cfc3ef72ab7469bd03eba4a 465 Gene3D G3DSA:3.40.50.720 6 97 3.2E-14 T 14-10-2018 PhaeoP54_00926 7e9528892cfc3ef72ab7469bd03eba4a 465 SUPERFAMILY SSF51984 6 97 7.45E-11 T 14-10-2018 PhaeoP54_00926 7e9528892cfc3ef72ab7469bd03eba4a 465 SUPERFAMILY SSF53244 329 463 3.05E-39 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 PhaeoP54_00926 7e9528892cfc3ef72ab7469bd03eba4a 465 SUPERFAMILY SSF53623 119 327 6.54E-45 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 PhaeoP54_00926 7e9528892cfc3ef72ab7469bd03eba4a 465 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 10 463 29.734 T 14-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 PhaeoP54_00926 7e9528892cfc3ef72ab7469bd03eba4a 465 Pfam PF08245 Mur ligase middle domain 125 310 1.9E-27 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 PhaeoP54_00926 7e9528892cfc3ef72ab7469bd03eba4a 465 Gene3D G3DSA:3.40.1190.10 102 329 3.2E-49 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 PhaeoP54_00926 7e9528892cfc3ef72ab7469bd03eba4a 465 Gene3D G3DSA:3.90.190.20 330 459 7.0E-37 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 PhaeoP54_00926 7e9528892cfc3ef72ab7469bd03eba4a 465 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 11 460 3.1E-101 T 14-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 PhaeoP54_01854 0b6509924a1e00c4f09834ccf18fefc8 77 Pfam PF06945 Protein of unknown function (DUF1289) 13 59 2.2E-20 T 14-10-2018 IPR010710 Protein of unknown function DUF1289 PhaeoP54_03280 e26d6b54e9e9b30cba2601442bc6a0bf 407 SUPERFAMILY SSF51905 6 396 2.24E-40 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PhaeoP54_03280 e26d6b54e9e9b30cba2601442bc6a0bf 407 SUPERFAMILY SSF160996 208 337 1.44E-13 T 14-10-2018 PhaeoP54_03280 e26d6b54e9e9b30cba2601442bc6a0bf 407 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 11 390 1.3E-77 T 14-10-2018 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like PhaeoP54_03280 e26d6b54e9e9b30cba2601442bc6a0bf 407 Gene3D G3DSA:1.10.8.260 267 321 4.8E-61 T 14-10-2018 IPR023166 HI0933-like insert domain superfamily PhaeoP54_03280 e26d6b54e9e9b30cba2601442bc6a0bf 407 Pfam PF03486 HI0933-like protein 9 390 1.0E-86 T 14-10-2018 PhaeoP54_03280 e26d6b54e9e9b30cba2601442bc6a0bf 407 Gene3D G3DSA:3.50.50.60 11 389 4.8E-61 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PhaeoP54_03280 e26d6b54e9e9b30cba2601442bc6a0bf 407 TIGRFAM TIGR03862 flavo_PP4765: flavoprotein, TIGR03862 family 30 396 5.7E-153 T 14-10-2018 IPR022460 Conserved hyptotheical protein CHP03862, flavoprotein, PP4765 PhaeoP54_03280 e26d6b54e9e9b30cba2601442bc6a0bf 407 Gene3D G3DSA:2.40.30.10 195 338 4.8E-61 T 14-10-2018 PhaeoP54_00901 18d0e3bcbd09f4a74587a65c0afe51b9 198 SUPERFAMILY SSF54211 4 89 8.47E-35 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold PhaeoP54_00901 18d0e3bcbd09f4a74587a65c0afe51b9 198 Gene3D G3DSA:3.30.230.40 1 92 6.0E-37 T 14-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 PhaeoP54_00901 18d0e3bcbd09f4a74587a65c0afe51b9 198 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 5 198 43.474 T 14-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 PhaeoP54_00901 18d0e3bcbd09f4a74587a65c0afe51b9 198 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 159 171 - T 14-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 PhaeoP54_00901 18d0e3bcbd09f4a74587a65c0afe51b9 198 Gene3D G3DSA:3.30.230.40 93 198 2.4E-38 T 14-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 PhaeoP54_00901 18d0e3bcbd09f4a74587a65c0afe51b9 198 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 64 77 - T 14-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 PhaeoP54_00901 18d0e3bcbd09f4a74587a65c0afe51b9 198 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 34 177 1.9E-65 T 14-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 PhaeoP54_00901 18d0e3bcbd09f4a74587a65c0afe51b9 198 SUPERFAMILY SSF54211 90 182 9.61E-35 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold PhaeoP54_02200 7e1c94c62d1e0195e10c057464cb8b95 453 Gene3D G3DSA:3.30.590.10 120 452 9.2E-100 T 14-10-2018 PhaeoP54_02200 7e1c94c62d1e0195e10c057464cb8b95 453 Gene3D G3DSA:3.10.20.70 5 115 2.8E-6 T 14-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PhaeoP54_02200 7e1c94c62d1e0195e10c057464cb8b95 453 SUPERFAMILY SSF54368 7 113 4.05E-18 T 14-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PhaeoP54_02200 7e1c94c62d1e0195e10c057464cb8b95 453 SMART SM01230 117 371 2.0E-103 T 14-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PhaeoP54_02200 7e1c94c62d1e0195e10c057464cb8b95 453 SUPERFAMILY SSF55931 117 451 5.79E-106 T 14-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 PhaeoP54_02200 7e1c94c62d1e0195e10c057464cb8b95 453 Pfam PF00120 Glutamine synthetase, catalytic domain 118 447 4.7E-99 T 14-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PhaeoP54_00323 759e2a627a23ad86b9b64264c2e804e4 225 Pfam PF00005 ABC transporter 17 164 2.0E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PhaeoP54_00323 759e2a627a23ad86b9b64264c2e804e4 225 SMART SM00382 26 212 5.4E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_00323 759e2a627a23ad86b9b64264c2e804e4 225 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PhaeoP54_00323 759e2a627a23ad86b9b64264c2e804e4 225 Gene3D G3DSA:3.40.50.300 1 223 6.2E-56 T 14-10-2018 PhaeoP54_00323 759e2a627a23ad86b9b64264c2e804e4 225 SUPERFAMILY SSF52540 1 205 6.21E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_02929 e9c631e39f5d9decf577b8a002e2ecc0 285 Pfam PF09955 Predicted integral membrane protein (DUF2189) 94 220 1.7E-36 T 14-10-2018 IPR018692 Predicted integral membrane protein DUF2189 PhaeoP54_03207 73c4d0a0e37210565cfecf35110ee89c 350 SMART SM01003 5 139 2.2E-31 T 14-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal PhaeoP54_03207 73c4d0a0e37210565cfecf35110ee89c 350 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 5 139 5.9E-26 T 14-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal PhaeoP54_03207 73c4d0a0e37210565cfecf35110ee89c 350 Gene3D G3DSA:3.40.50.720 4 345 5.1E-128 T 14-10-2018 PhaeoP54_03207 73c4d0a0e37210565cfecf35110ee89c 350 SUPERFAMILY SSF52283 3 341 2.21E-30 T 14-10-2018 PhaeoP54_03207 73c4d0a0e37210565cfecf35110ee89c 350 PIRSF PIRSF018250 1 349 1.0E-148 T 14-10-2018 IPR027281 Saccharopine dehydrogenase [NAD(+), L-lysine-forming] GO:0004754|GO:0009085 KEGG: 00300+1.5.1.7|KEGG: 00310+1.5.1.7 PhaeoP54_03207 73c4d0a0e37210565cfecf35110ee89c 350 SMART SM01002 169 302 7.6E-9 T 14-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain PhaeoP54_03207 73c4d0a0e37210565cfecf35110ee89c 350 Gene3D G3DSA:3.40.50.720 132 310 5.1E-128 T 14-10-2018 PhaeoP54_03207 73c4d0a0e37210565cfecf35110ee89c 350 SUPERFAMILY SSF51735 181 308 2.76E-12 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PhaeoP54_03881 62ec0e5f58a7ca7ceea8422c44a80cea 155 SUPERFAMILY SSF110087 11 147 2.22E-41 T 14-10-2018 IPR036182 Copper chaperone PCuAC superfamily PhaeoP54_03881 62ec0e5f58a7ca7ceea8422c44a80cea 155 Gene3D G3DSA:2.60.40.1890 35 146 1.9E-34 T 14-10-2018 IPR036182 Copper chaperone PCuAC superfamily PhaeoP54_03881 62ec0e5f58a7ca7ceea8422c44a80cea 155 Pfam PF04314 Copper chaperone PCu(A)C 32 141 6.0E-32 T 14-10-2018 IPR007410 Copper chaperone PCuAC PhaeoP54_00989 cb53ca8ed065e237d19d993fc6ed3197 447 Pfam PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 45 228 1.2E-50 T 14-10-2018 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 PhaeoP54_00989 cb53ca8ed065e237d19d993fc6ed3197 447 Gene3D G3DSA:3.40.50.2000 235 422 2.2E-62 T 14-10-2018 PhaeoP54_00989 cb53ca8ed065e237d19d993fc6ed3197 447 Gene3D G3DSA:3.40.50.11720 54 228 3.6E-36 T 14-10-2018 IPR038107 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal domain superfamily KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 PhaeoP54_00989 cb53ca8ed065e237d19d993fc6ed3197 447 SUPERFAMILY SSF53756 129 425 1.57E-14 T 14-10-2018 PhaeoP54_00380 6c2f40176ded722b802d2123c2ef1508 400 SUPERFAMILY SSF53901 2 275 7.02E-80 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 PhaeoP54_00380 6c2f40176ded722b802d2123c2ef1508 400 PIRSF PIRSF000429 1 400 1.5E-128 T 14-10-2018 IPR002155 Thiolase GO:0016747 PhaeoP54_00380 6c2f40176ded722b802d2123c2ef1508 400 ProSitePatterns PS00737 Thiolases signature 2. 346 362 - T 14-10-2018 IPR020613 Thiolase, conserved site GO:0016747 PhaeoP54_00380 6c2f40176ded722b802d2123c2ef1508 400 Pfam PF00108 Thiolase, N-terminal domain 4 267 1.8E-74 T 14-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 PhaeoP54_00380 6c2f40176ded722b802d2123c2ef1508 400 ProSitePatterns PS00099 Thiolases active site. 381 394 - T 14-10-2018 IPR020610 Thiolase, active site GO:0016747 PhaeoP54_00380 6c2f40176ded722b802d2123c2ef1508 400 TIGRFAM TIGR02430 pcaF: 3-oxoadipyl-CoA thiolase 2 400 3.6E-207 T 14-10-2018 IPR012793 Beta-ketoadipyl CoA thiolase GO:0016747|GO:0019619 KEGG: 00360+2.3.1.174|KEGG: 00362+2.3.1.174|MetaCyc: PWY-1361|MetaCyc: PWY-2361|MetaCyc: PWY-6185 PhaeoP54_00380 6c2f40176ded722b802d2123c2ef1508 400 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 85 103 - T 14-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 PhaeoP54_00380 6c2f40176ded722b802d2123c2ef1508 400 Gene3D G3DSA:3.40.47.10 5 281 1.0E-153 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 PhaeoP54_00380 6c2f40176ded722b802d2123c2ef1508 400 Gene3D G3DSA:3.40.47.10 140 397 1.0E-153 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 PhaeoP54_00380 6c2f40176ded722b802d2123c2ef1508 400 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 5 398 2.5E-134 T 14-10-2018 IPR002155 Thiolase GO:0016747 PhaeoP54_00380 6c2f40176ded722b802d2123c2ef1508 400 Pfam PF02803 Thiolase, C-terminal domain 275 399 3.9E-45 T 14-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 PhaeoP54_00380 6c2f40176ded722b802d2123c2ef1508 400 SUPERFAMILY SSF53901 276 399 5.96E-47 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 PhaeoP54_00615 ab0f712ab6bd06d55d72ae46cd3b2e72 176 PIRSF PIRSF032131 1 175 2.5E-43 T 14-10-2018 IPR009562 Protein of unknown function DUF1178 PhaeoP54_00615 ab0f712ab6bd06d55d72ae46cd3b2e72 176 Pfam PF06676 Protein of unknown function (DUF1178) 1 171 3.2E-53 T 14-10-2018 IPR009562 Protein of unknown function DUF1178 PhaeoP54_01907 ba31e5ad402194a57b32e3928cdfdc2b 360 SUPERFAMILY SSF52540 9 246 1.2E-78 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_01907 ba31e5ad402194a57b32e3928cdfdc2b 360 Gene3D G3DSA:2.40.50.140 288 350 6.9E-9 T 14-10-2018 PhaeoP54_01907 ba31e5ad402194a57b32e3928cdfdc2b 360 Pfam PF00005 ABC transporter 24 166 8.4E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PhaeoP54_01907 ba31e5ad402194a57b32e3928cdfdc2b 360 Pfam PF08402 TOBE domain 281 357 1.0E-14 T 14-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 PhaeoP54_01907 ba31e5ad402194a57b32e3928cdfdc2b 360 SUPERFAMILY SSF50331 242 357 2.08E-14 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal PhaeoP54_01907 ba31e5ad402194a57b32e3928cdfdc2b 360 Gene3D G3DSA:3.40.50.300 9 226 4.6E-62 T 14-10-2018 PhaeoP54_01907 ba31e5ad402194a57b32e3928cdfdc2b 360 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PhaeoP54_01907 ba31e5ad402194a57b32e3928cdfdc2b 360 SMART SM00382 33 216 2.5E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_01907 ba31e5ad402194a57b32e3928cdfdc2b 360 Gene3D G3DSA:2.40.50.940 227 354 6.9E-9 T 14-10-2018 PhaeoP54_00038 8fcd4307467a994ab70d2593214f9ba0 448 PIRSF PIRSF000521 33 446 9.9E-30 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PhaeoP54_00038 8fcd4307467a994ab70d2593214f9ba0 448 SUPERFAMILY SSF53383 14 442 7.19E-117 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PhaeoP54_00038 8fcd4307467a994ab70d2593214f9ba0 448 Gene3D G3DSA:3.90.1150.10 14 442 1.6E-144 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 PhaeoP54_00038 8fcd4307467a994ab70d2593214f9ba0 448 Gene3D G3DSA:3.40.640.10 65 343 1.6E-144 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PhaeoP54_00038 8fcd4307467a994ab70d2593214f9ba0 448 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 255 292 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PhaeoP54_00038 8fcd4307467a994ab70d2593214f9ba0 448 Pfam PF00202 Aminotransferase class-III 30 441 6.2E-90 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PhaeoP54_00792 14bc07c1d1adcc9fe31d4e30586b1cae 529 Pfam PF01266 FAD dependent oxidoreductase 12 389 3.1E-50 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 PhaeoP54_00792 14bc07c1d1adcc9fe31d4e30586b1cae 529 ProSitePatterns PS00978 FAD-dependent glycerol-3-phosphate dehydrogenase signature 2. 382 392 - T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 PhaeoP54_00792 14bc07c1d1adcc9fe31d4e30586b1cae 529 Gene3D G3DSA:1.10.8.870 423 492 6.1E-20 T 14-10-2018 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 PhaeoP54_00792 14bc07c1d1adcc9fe31d4e30586b1cae 529 Gene3D G3DSA:3.30.9.10 89 352 3.0E-125 T 14-10-2018 PhaeoP54_00792 14bc07c1d1adcc9fe31d4e30586b1cae 529 ProSitePatterns PS00977 FAD-dependent glycerol-3-phosphate dehydrogenase signature 1. 16 33 - T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 PhaeoP54_00792 14bc07c1d1adcc9fe31d4e30586b1cae 529 Gene3D G3DSA:3.50.50.60 12 396 3.0E-125 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PhaeoP54_00792 14bc07c1d1adcc9fe31d4e30586b1cae 529 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 24 34 1.6E-26 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 PhaeoP54_00792 14bc07c1d1adcc9fe31d4e30586b1cae 529 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 377 389 1.6E-26 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 PhaeoP54_00792 14bc07c1d1adcc9fe31d4e30586b1cae 529 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 85 97 1.6E-26 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 PhaeoP54_00792 14bc07c1d1adcc9fe31d4e30586b1cae 529 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 345 351 1.6E-26 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 PhaeoP54_00792 14bc07c1d1adcc9fe31d4e30586b1cae 529 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 11 23 1.6E-26 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 PhaeoP54_00792 14bc07c1d1adcc9fe31d4e30586b1cae 529 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 40 52 1.6E-26 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 PhaeoP54_00792 14bc07c1d1adcc9fe31d4e30586b1cae 529 SUPERFAMILY SSF51905 11 404 1.74E-35 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PhaeoP54_00792 14bc07c1d1adcc9fe31d4e30586b1cae 529 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 411 519 1.1E-13 T 14-10-2018 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 PhaeoP54_00792 14bc07c1d1adcc9fe31d4e30586b1cae 529 SUPERFAMILY SSF54373 258 351 2.35E-9 T 14-10-2018 PhaeoP54_01205 a90d58d9ac1f34e7aa16c037eb2a9bd2 520 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 132 151 1.9E-15 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PhaeoP54_01205 a90d58d9ac1f34e7aa16c037eb2a9bd2 520 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 326 345 1.9E-15 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PhaeoP54_01205 a90d58d9ac1f34e7aa16c037eb2a9bd2 520 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 377 403 1.9E-15 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PhaeoP54_01205 a90d58d9ac1f34e7aa16c037eb2a9bd2 520 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 162 186 1.9E-15 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PhaeoP54_01205 a90d58d9ac1f34e7aa16c037eb2a9bd2 520 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 235 259 1.9E-15 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PhaeoP54_01205 a90d58d9ac1f34e7aa16c037eb2a9bd2 520 Pfam PF00361 Proton-conducting membrane transporter 128 418 2.2E-43 T 14-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PhaeoP54_02713 cc519b50efe32a46d202d9095ce74ed8 1170 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 7 1043 0.0 T 14-10-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PhaeoP54_02713 cc519b50efe32a46d202d9095ce74ed8 1170 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 298 745 9.2E-164 T 14-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PhaeoP54_02713 cc519b50efe32a46d202d9095ce74ed8 1170 Pfam PF02811 PHP domain 9 178 1.7E-32 T 14-10-2018 IPR004013 PHP domain GO:0003824 PhaeoP54_02713 cc519b50efe32a46d202d9095ce74ed8 1170 SUPERFAMILY SSF89550 7 273 2.75E-14 T 14-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 PhaeoP54_02713 cc519b50efe32a46d202d9095ce74ed8 1170 SMART SM00481 8 75 1.8E-20 T 14-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal PhaeoP54_02713 cc519b50efe32a46d202d9095ce74ed8 1170 Gene3D G3DSA:1.10.10.1600 435 514 1.1E-21 T 14-10-2018 PhaeoP54_02713 cc519b50efe32a46d202d9095ce74ed8 1170 Pfam PF14579 Helix-hairpin-helix motif 823 910 4.0E-18 T 14-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PhaeoP54_02713 cc519b50efe32a46d202d9095ce74ed8 1170 Gene3D G3DSA:3.20.20.140 1 279 6.1E-78 T 14-10-2018 PhaeoP54_02729 6c22f64b1480a706880605ca7408d378 596 SUPERFAMILY SSF56235 57 595 2.7E-159 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal PhaeoP54_02729 6c22f64b1480a706880605ca7408d378 596 Gene3D G3DSA:3.60.20.40 418 596 9.4E-54 T 14-10-2018 PhaeoP54_02729 6c22f64b1480a706880605ca7408d378 596 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 178 197 7.3E-60 T 14-10-2018 PhaeoP54_02729 6c22f64b1480a706880605ca7408d378 596 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 476 491 7.3E-60 T 14-10-2018 PhaeoP54_02729 6c22f64b1480a706880605ca7408d378 596 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 418 436 7.3E-60 T 14-10-2018 PhaeoP54_02729 6c22f64b1480a706880605ca7408d378 596 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 160 178 7.3E-60 T 14-10-2018 PhaeoP54_02729 6c22f64b1480a706880605ca7408d378 596 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 309 328 7.3E-60 T 14-10-2018 PhaeoP54_02729 6c22f64b1480a706880605ca7408d378 596 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 279 295 7.3E-60 T 14-10-2018 PhaeoP54_02729 6c22f64b1480a706880605ca7408d378 596 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 440 458 7.3E-60 T 14-10-2018 PhaeoP54_02729 6c22f64b1480a706880605ca7408d378 596 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 85 110 7.3E-60 T 14-10-2018 PhaeoP54_02729 6c22f64b1480a706880605ca7408d378 596 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 500 517 7.3E-60 T 14-10-2018 PhaeoP54_02729 6c22f64b1480a706880605ca7408d378 596 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 64 588 1.2E-113 T 14-10-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-4061|MetaCyc: PWY-5826|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7559 PhaeoP54_02729 6c22f64b1480a706880605ca7408d378 596 Gene3D G3DSA:1.10.246.130 295 413 9.8E-33 T 14-10-2018 PhaeoP54_02729 6c22f64b1480a706880605ca7408d378 596 Pfam PF01019 Gamma-glutamyltranspeptidase 78 591 8.3E-145 T 14-10-2018 PhaeoP54_02500 b4d6c9cfbaa4d6334235ff120f4ade0c 183 Pfam PF01292 Prokaryotic cytochrome b561 7 175 9.1E-24 T 14-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 PhaeoP54_02500 b4d6c9cfbaa4d6334235ff120f4ade0c 183 Gene3D G3DSA:1.20.950.20 4 92 1.0E-5 T 14-10-2018 PhaeoP54_02500 b4d6c9cfbaa4d6334235ff120f4ade0c 183 SUPERFAMILY SSF81342 4 177 1.02E-27 T 14-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 PhaeoP54_00509 a1a67141036e1cdedb41930e988f85c4 226 TIGRFAM TIGR00696 wecG_tagA_cpsF: glycosyltransferase, WecB/TagA/CpsF family 36 206 3.9E-30 T 14-10-2018 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 PhaeoP54_00509 a1a67141036e1cdedb41930e988f85c4 226 Pfam PF03808 Glycosyl transferase WecB/TagA/CpsF family 37 206 2.0E-43 T 14-10-2018 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 PhaeoP54_03081 f34206b4e873155de43d2993f456b54a 233 Gene3D G3DSA:1.10.10.10 123 233 1.2E-29 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_03081 f34206b4e873155de43d2993f456b54a 233 Gene3D G3DSA:3.40.50.2300 1 122 3.5E-37 T 14-10-2018 PhaeoP54_03081 f34206b4e873155de43d2993f456b54a 233 Pfam PF00486 Transcriptional regulatory protein, C terminal 154 229 4.7E-22 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PhaeoP54_03081 f34206b4e873155de43d2993f456b54a 233 SUPERFAMILY SSF52172 2 183 1.05E-38 T 14-10-2018 IPR011006 CheY-like superfamily PhaeoP54_03081 f34206b4e873155de43d2993f456b54a 233 SMART SM00862 154 230 2.6E-20 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PhaeoP54_03081 f34206b4e873155de43d2993f456b54a 233 Pfam PF00072 Response regulator receiver domain 4 113 1.4E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PhaeoP54_03081 f34206b4e873155de43d2993f456b54a 233 SMART SM00448 2 112 9.7E-40 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PhaeoP54_02544 d8529a38969a49202fc4c35abb6fb995 552 Gene3D G3DSA:3.40.50.620 266 551 5.7E-104 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PhaeoP54_02544 d8529a38969a49202fc4c35abb6fb995 552 PIRSF PIRSF006630 244 552 1.1E-111 T 14-10-2018 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 PhaeoP54_02544 d8529a38969a49202fc4c35abb6fb995 552 PIRSF PIRSF006630 2 262 9.3E-65 T 14-10-2018 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 PhaeoP54_02544 d8529a38969a49202fc4c35abb6fb995 552 Gene3D G3DSA:3.60.110.10 1 253 9.3E-73 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily PhaeoP54_02544 d8529a38969a49202fc4c35abb6fb995 552 Pfam PF02540 NAD synthase 271 523 7.7E-67 T 14-10-2018 IPR022310 NAD/GMP synthase PhaeoP54_02544 d8529a38969a49202fc4c35abb6fb995 552 SUPERFAMILY SSF56317 4 244 3.01E-58 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily PhaeoP54_02544 d8529a38969a49202fc4c35abb6fb995 552 SUPERFAMILY SSF52402 256 532 3.09E-72 T 14-10-2018 PhaeoP54_02544 d8529a38969a49202fc4c35abb6fb995 552 TIGRFAM TIGR00552 nadE: NAD+ synthetase 274 523 6.0E-55 T 14-10-2018 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|Reactome: R-HSA-196807 PhaeoP54_02544 d8529a38969a49202fc4c35abb6fb995 552 Pfam PF00795 Carbon-nitrogen hydrolase 6 247 1.3E-28 T 14-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 PhaeoP54_02544 d8529a38969a49202fc4c35abb6fb995 552 Hamap MF_02090 Glutamine-dependent NAD(+) synthetase [nadE]. 5 550 26.762 T 14-10-2018 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 PhaeoP54_02496 1ea6920e39d53fd2a9894f3b25f6402e 382 Pfam PF00175 Oxidoreductase NAD-binding domain 255 362 4.2E-18 T 14-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 PhaeoP54_02496 1ea6920e39d53fd2a9894f3b25f6402e 382 SUPERFAMILY SSF63380 147 244 3.03E-11 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel PhaeoP54_02496 1ea6920e39d53fd2a9894f3b25f6402e 382 Gene3D G3DSA:2.40.30.10 145 244 1.0E-11 T 14-10-2018 PhaeoP54_02496 1ea6920e39d53fd2a9894f3b25f6402e 382 Gene3D G3DSA:3.40.50.80 245 381 1.7E-32 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain PhaeoP54_02496 1ea6920e39d53fd2a9894f3b25f6402e 382 SUPERFAMILY SSF52343 234 377 2.62E-33 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain PhaeoP54_02496 1ea6920e39d53fd2a9894f3b25f6402e 382 PRINTS PR00410 Phenol hydroxylase reductase family signature 254 273 2.2E-12 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 PhaeoP54_02496 1ea6920e39d53fd2a9894f3b25f6402e 382 PRINTS PR00410 Phenol hydroxylase reductase family signature 279 288 2.2E-12 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 PhaeoP54_02496 1ea6920e39d53fd2a9894f3b25f6402e 382 PRINTS PR00410 Phenol hydroxylase reductase family signature 238 247 2.2E-12 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 PhaeoP54_02496 1ea6920e39d53fd2a9894f3b25f6402e 382 PRINTS PR00410 Phenol hydroxylase reductase family signature 174 186 2.2E-12 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 PhaeoP54_01560 14bcb792e3cd9b6e0ec757e849f19894 229 SUPERFAMILY SSF52172 4 129 1.71E-42 T 14-10-2018 IPR011006 CheY-like superfamily PhaeoP54_01560 14bcb792e3cd9b6e0ec757e849f19894 229 Gene3D G3DSA:1.10.10.10 130 229 3.1E-33 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_01560 14bcb792e3cd9b6e0ec757e849f19894 229 SMART SM00448 6 119 2.2E-44 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PhaeoP54_01560 14bcb792e3cd9b6e0ec757e849f19894 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 155 228 2.5E-26 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PhaeoP54_01560 14bcb792e3cd9b6e0ec757e849f19894 229 SUPERFAMILY SSF46894 134 228 1.3E-29 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PhaeoP54_01560 14bcb792e3cd9b6e0ec757e849f19894 229 TIGRFAM TIGR02154 PhoB: phosphate regulon transcriptional regulatory protein PhoB 5 228 4.3E-105 T 14-10-2018 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB GO:0000156|GO:0000160|GO:0003677|GO:0006817 PhaeoP54_01560 14bcb792e3cd9b6e0ec757e849f19894 229 Gene3D G3DSA:3.40.50.2300 1 129 3.5E-38 T 14-10-2018 PhaeoP54_01560 14bcb792e3cd9b6e0ec757e849f19894 229 SMART SM00862 153 228 6.9E-28 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PhaeoP54_01560 14bcb792e3cd9b6e0ec757e849f19894 229 Pfam PF00072 Response regulator receiver domain 8 120 5.3E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PhaeoP54_01297 30f600eca7fcfe154e10cc881aec1237 257 SUPERFAMILY SSF51735 5 256 6.23E-78 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PhaeoP54_01297 30f600eca7fcfe154e10cc881aec1237 257 Gene3D G3DSA:3.40.50.720 1 257 4.6E-82 T 14-10-2018 PhaeoP54_01297 30f600eca7fcfe154e10cc881aec1237 257 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 194 0.0017 T 14-10-2018 PhaeoP54_01297 30f600eca7fcfe154e10cc881aec1237 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 5.6E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_01297 30f600eca7fcfe154e10cc881aec1237 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 5.6E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_01297 30f600eca7fcfe154e10cc881aec1237 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 5.6E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_01297 30f600eca7fcfe154e10cc881aec1237 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 3.9E-37 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_01297 30f600eca7fcfe154e10cc881aec1237 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 218 238 3.9E-37 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_01297 30f600eca7fcfe154e10cc881aec1237 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 3.9E-37 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_01297 30f600eca7fcfe154e10cc881aec1237 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 3.9E-37 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_01297 30f600eca7fcfe154e10cc881aec1237 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 3.9E-37 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_01297 30f600eca7fcfe154e10cc881aec1237 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 3.9E-37 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_01297 30f600eca7fcfe154e10cc881aec1237 257 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 253 3.2E-57 T 14-10-2018 PhaeoP54_01297 30f600eca7fcfe154e10cc881aec1237 257 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 PhaeoP54_03052 27f572e9c0deda82cf519702b543a5e8 1413 Gene3D G3DSA:2.40.50.100 1019 1120 9.3E-27 T 14-10-2018 PhaeoP54_03052 27f572e9c0deda82cf519702b543a5e8 1413 Gene3D G3DSA:1.10.150.390 1311 1372 2.1E-26 T 14-10-2018 PhaeoP54_03052 27f572e9c0deda82cf519702b543a5e8 1413 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 14 1372 18.736 T 14-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PhaeoP54_03052 27f572e9c0deda82cf519702b543a5e8 1413 SUPERFAMILY SSF64484 17 1359 0.0 T 14-10-2018 PhaeoP54_03052 27f572e9c0deda82cf519702b543a5e8 1413 Gene3D G3DSA:2.40.50.100 944 1018 3.9E-20 T 14-10-2018 PhaeoP54_03052 27f572e9c0deda82cf519702b543a5e8 1413 Pfam PF04997 RNA polymerase Rpb1, domain 1 17 345 2.9E-89 T 14-10-2018 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PhaeoP54_03052 27f572e9c0deda82cf519702b543a5e8 1413 Pfam PF04998 RNA polymerase Rpb1, domain 5 891 1310 4.6E-44 T 14-10-2018 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PhaeoP54_03052 27f572e9c0deda82cf519702b543a5e8 1413 Gene3D G3DSA:1.10.132.30 639 787 1.5E-59 T 14-10-2018 IPR038120 RNA polymerase Rpb1, funnel domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PhaeoP54_03052 27f572e9c0deda82cf519702b543a5e8 1413 Gene3D G3DSA:1.10.1790.20 1129 1309 1.1E-67 T 14-10-2018 PhaeoP54_03052 27f572e9c0deda82cf519702b543a5e8 1413 Gene3D G3DSA:2.40.50.100 1145 1210 1.1E-67 T 14-10-2018 PhaeoP54_03052 27f572e9c0deda82cf519702b543a5e8 1413 Gene3D G3DSA:1.10.40.90 377 419 2.1E-21 T 14-10-2018 PhaeoP54_03052 27f572e9c0deda82cf519702b543a5e8 1413 Pfam PF04998 RNA polymerase Rpb1, domain 5 763 850 5.6E-26 T 14-10-2018 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PhaeoP54_03052 27f572e9c0deda82cf519702b543a5e8 1413 SMART SM00663 238 517 4.0E-180 T 14-10-2018 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PhaeoP54_03052 27f572e9c0deda82cf519702b543a5e8 1413 Pfam PF00623 RNA polymerase Rpb1, domain 2 347 401 1.8E-8 T 14-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PhaeoP54_03052 27f572e9c0deda82cf519702b543a5e8 1413 Pfam PF00623 RNA polymerase Rpb1, domain 2 398 488 2.0E-26 T 14-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PhaeoP54_03052 27f572e9c0deda82cf519702b543a5e8 1413 Pfam PF04983 RNA polymerase Rpb1, domain 3 492 645 7.9E-24 T 14-10-2018 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PhaeoP54_03052 27f572e9c0deda82cf519702b543a5e8 1413 Pfam PF05000 RNA polymerase Rpb1, domain 4 674 760 4.2E-17 T 14-10-2018 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PhaeoP54_03052 27f572e9c0deda82cf519702b543a5e8 1413 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 21 1360 0.0 T 14-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PhaeoP54_03052 27f572e9c0deda82cf519702b543a5e8 1413 Gene3D G3DSA:1.10.274.100 493 638 7.1E-31 T 14-10-2018 PhaeoP54_03390 be9ba386bfd192d84790ca456ea87778 387 Gene3D G3DSA:1.10.287.110 1 122 2.2E-34 T 14-10-2018 IPR036869 Chaperone J-domain superfamily PhaeoP54_03390 be9ba386bfd192d84790ca456ea87778 387 Gene3D G3DSA:2.60.260.20 128 260 3.9E-36 T 14-10-2018 PhaeoP54_03390 be9ba386bfd192d84790ca456ea87778 387 SUPERFAMILY SSF49493 125 278 9.55E-22 T 14-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 PhaeoP54_03390 be9ba386bfd192d84790ca456ea87778 387 SUPERFAMILY SSF46565 1 119 3.01E-33 T 14-10-2018 IPR036869 Chaperone J-domain superfamily PhaeoP54_03390 be9ba386bfd192d84790ca456ea87778 387 Pfam PF00684 DnaJ central domain 158 218 4.3E-12 T 14-10-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 PhaeoP54_03390 be9ba386bfd192d84790ca456ea87778 387 SUPERFAMILY SSF49493 270 356 3.27E-23 T 14-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 PhaeoP54_03390 be9ba386bfd192d84790ca456ea87778 387 Gene3D G3DSA:2.10.230.10 158 218 3.9E-36 T 14-10-2018 PhaeoP54_03390 be9ba386bfd192d84790ca456ea87778 387 ProSitePatterns PS00636 Nt-dnaJ domain signature. 47 66 - T 14-10-2018 IPR018253 DnaJ domain, conserved site PhaeoP54_03390 be9ba386bfd192d84790ca456ea87778 387 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 2 381 41.259 T 14-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 PhaeoP54_03390 be9ba386bfd192d84790ca456ea87778 387 SUPERFAMILY SSF57938 145 222 1.31E-20 T 14-10-2018 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily PhaeoP54_03390 be9ba386bfd192d84790ca456ea87778 387 PRINTS PR00625 DnaJ domain signature 62 81 8.6E-28 T 14-10-2018 IPR001623 DnaJ domain PhaeoP54_03390 be9ba386bfd192d84790ca456ea87778 387 PRINTS PR00625 DnaJ domain signature 7 25 8.6E-28 T 14-10-2018 IPR001623 DnaJ domain PhaeoP54_03390 be9ba386bfd192d84790ca456ea87778 387 PRINTS PR00625 DnaJ domain signature 25 40 8.6E-28 T 14-10-2018 IPR001623 DnaJ domain PhaeoP54_03390 be9ba386bfd192d84790ca456ea87778 387 PRINTS PR00625 DnaJ domain signature 42 62 8.6E-28 T 14-10-2018 IPR001623 DnaJ domain PhaeoP54_03390 be9ba386bfd192d84790ca456ea87778 387 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 5 361 2.2E-131 T 14-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 PhaeoP54_03390 be9ba386bfd192d84790ca456ea87778 387 Pfam PF00226 DnaJ domain 5 67 5.5E-25 T 14-10-2018 IPR001623 DnaJ domain PhaeoP54_03390 be9ba386bfd192d84790ca456ea87778 387 SMART SM00271 4 62 9.2E-30 T 14-10-2018 IPR001623 DnaJ domain PhaeoP54_03390 be9ba386bfd192d84790ca456ea87778 387 Pfam PF01556 DnaJ C terminal domain 132 345 9.2E-42 T 14-10-2018 IPR002939 Chaperone DnaJ, C-terminal PhaeoP54_03390 be9ba386bfd192d84790ca456ea87778 387 Gene3D G3DSA:2.60.260.20 265 374 5.4E-29 T 14-10-2018 PhaeoP54_02984 dc39a1b827a6a6a31b12a32459b402e7 605 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 5 375 2.8E-87 T 14-10-2018 IPR028053 Membrane insertase YidC, N-terminal PhaeoP54_02984 dc39a1b827a6a6a31b12a32459b402e7 605 PRINTS PR01900 YidC translocation/secretion protein signature 535 559 2.7E-17 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 PhaeoP54_02984 dc39a1b827a6a6a31b12a32459b402e7 605 PRINTS PR01900 YidC translocation/secretion protein signature 362 378 2.7E-17 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 PhaeoP54_02984 dc39a1b827a6a6a31b12a32459b402e7 605 PRINTS PR01900 YidC translocation/secretion protein signature 516 531 2.7E-17 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 PhaeoP54_02984 dc39a1b827a6a6a31b12a32459b402e7 605 Gene3D G3DSA:2.70.98.90 75 346 2.6E-36 T 14-10-2018 IPR038221 YidC, periplasmic domain superfamily PhaeoP54_02984 dc39a1b827a6a6a31b12a32459b402e7 605 Pfam PF02096 60Kd inner membrane protein 377 580 1.5E-59 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 PhaeoP54_02984 dc39a1b827a6a6a31b12a32459b402e7 605 Pfam PF14849 YidC periplasmic domain 78 365 4.1E-81 T 14-10-2018 IPR038210 Membrane insertase YidC, periplasmic domain PhaeoP54_02984 dc39a1b827a6a6a31b12a32459b402e7 605 PRINTS PR00701 60kDa inner membrane protein signature 84 105 5.5E-18 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 PhaeoP54_02984 dc39a1b827a6a6a31b12a32459b402e7 605 PRINTS PR00701 60kDa inner membrane protein signature 347 367 5.5E-18 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 PhaeoP54_02984 dc39a1b827a6a6a31b12a32459b402e7 605 PRINTS PR00701 60kDa inner membrane protein signature 438 461 5.5E-18 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 PhaeoP54_02984 dc39a1b827a6a6a31b12a32459b402e7 605 PRINTS PR00701 60kDa inner membrane protein signature 269 284 5.5E-18 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 PhaeoP54_02984 dc39a1b827a6a6a31b12a32459b402e7 605 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 376 580 8.6E-70 T 14-10-2018 IPR028055 Membrane insertase YidC/Oxa1, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PhaeoP54_02984 dc39a1b827a6a6a31b12a32459b402e7 605 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 6 582 21.408 T 14-10-2018 IPR019998 Membrane insertase YidC GO:0016021|GO:0032977 PhaeoP54_01604 9349187be80e5e1de0494c16e28b9192 288 SUPERFAMILY SSF56176 1 170 3.76E-49 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 PhaeoP54_01604 9349187be80e5e1de0494c16e28b9192 288 Pfam PF00941 FAD binding domain in molybdopterin dehydrogenase 2 170 5.0E-44 T 14-10-2018 IPR002346 Molybdopterin dehydrogenase, FAD-binding GO:0016491|GO:0055114 PhaeoP54_01604 9349187be80e5e1de0494c16e28b9192 288 Gene3D G3DSA:3.30.390.50 176 281 5.1E-28 T 14-10-2018 PhaeoP54_01604 9349187be80e5e1de0494c16e28b9192 288 Pfam PF03450 CO dehydrogenase flavoprotein C-terminal domain 178 276 2.6E-22 T 14-10-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal PhaeoP54_01604 9349187be80e5e1de0494c16e28b9192 288 SUPERFAMILY SSF55447 176 279 1.7E-26 T 14-10-2018 IPR036683 CO dehydrogenase flavoprotein, C-terminal domain superfamily PhaeoP54_01604 9349187be80e5e1de0494c16e28b9192 288 SMART SM01092 177 279 3.6E-20 T 14-10-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal PhaeoP54_01604 9349187be80e5e1de0494c16e28b9192 288 Gene3D G3DSA:3.30.465.10 1 172 2.3E-47 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 PhaeoP54_02843 be45b0dacb3003aca80c2d01eef0e7ca 401 TIGRFAM TIGR00843 benE: benzoate transporter 4 377 3.7E-105 T 14-10-2018 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 PhaeoP54_02843 be45b0dacb3003aca80c2d01eef0e7ca 401 Pfam PF03594 Benzoate membrane transport protein 5 380 1.4E-124 T 14-10-2018 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 PhaeoP54_01183 bad0c02d6595a8425ea1eb50ab9544ce 733 SUPERFAMILY SSF52096 2 314 6.89E-55 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily PhaeoP54_01183 bad0c02d6595a8425ea1eb50ab9544ce 733 Gene3D G3DSA:3.40.50.720 326 508 6.7E-66 T 14-10-2018 PhaeoP54_01183 bad0c02d6595a8425ea1eb50ab9544ce 733 Gene3D G3DSA:3.90.226.10 1 325 3.4E-80 T 14-10-2018 PhaeoP54_01183 bad0c02d6595a8425ea1eb50ab9544ce 733 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 328 506 1.1E-61 T 14-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 PhaeoP54_01183 bad0c02d6595a8425ea1eb50ab9544ce 733 Gene3D G3DSA:1.10.1040.50 510 712 6.5E-62 T 14-10-2018 PhaeoP54_01183 bad0c02d6595a8425ea1eb50ab9544ce 733 SUPERFAMILY SSF51735 325 507 2.37E-58 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PhaeoP54_01183 bad0c02d6595a8425ea1eb50ab9544ce 733 SUPERFAMILY SSF48179 510 647 4.51E-25 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 PhaeoP54_01183 bad0c02d6595a8425ea1eb50ab9544ce 733 SUPERFAMILY SSF48179 634 722 1.62E-21 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 PhaeoP54_01183 bad0c02d6595a8425ea1eb50ab9544ce 733 Pfam PF00378 Enoyl-CoA hydratase/isomerase 11 201 8.0E-22 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 PhaeoP54_01183 bad0c02d6595a8425ea1eb50ab9544ce 733 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 510 605 2.7E-20 T 14-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 PhaeoP54_03206 f50dd2659bf2cfa8edb760edce9e2692 205 Pfam PF02798 Glutathione S-transferase, N-terminal domain 3 73 5.2E-15 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 PhaeoP54_03206 f50dd2659bf2cfa8edb760edce9e2692 205 Gene3D G3DSA:3.40.30.10 1 85 3.4E-24 T 14-10-2018 PhaeoP54_03206 f50dd2659bf2cfa8edb760edce9e2692 205 SUPERFAMILY SSF47616 80 201 8.38E-17 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily PhaeoP54_03206 f50dd2659bf2cfa8edb760edce9e2692 205 Gene3D G3DSA:1.20.1050.10 86 193 1.5E-39 T 14-10-2018 PhaeoP54_03206 f50dd2659bf2cfa8edb760edce9e2692 205 Pfam PF14497 Glutathione S-transferase, C-terminal domain 126 199 2.2E-5 T 14-10-2018 IPR004046 Glutathione S-transferase, C-terminal PhaeoP54_03206 f50dd2659bf2cfa8edb760edce9e2692 205 SUPERFAMILY SSF52833 1 84 1.1E-21 T 14-10-2018 IPR036249 Thioredoxin-like superfamily PhaeoP54_01704 99126c267445a89a418c348f05c0e878 673 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 17 325 6.4E-116 T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 PhaeoP54_01704 99126c267445a89a418c348f05c0e878 673 ProSitePatterns PS00802 Transketolase signature 2. 470 486 - T 14-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 PhaeoP54_01704 99126c267445a89a418c348f05c0e878 673 Pfam PF02779 Transketolase, pyrimidine binding domain 356 527 1.4E-45 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain PhaeoP54_01704 99126c267445a89a418c348f05c0e878 673 Gene3D G3DSA:3.40.50.970 13 330 2.7E-102 T 14-10-2018 PhaeoP54_01704 99126c267445a89a418c348f05c0e878 673 SUPERFAMILY SSF52922 539 673 3.4E-40 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 PhaeoP54_01704 99126c267445a89a418c348f05c0e878 673 Gene3D G3DSA:3.40.50.920 542 673 9.8E-41 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 PhaeoP54_01704 99126c267445a89a418c348f05c0e878 673 SMART SM00861 357 528 2.1E-66 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain PhaeoP54_01704 99126c267445a89a418c348f05c0e878 673 SUPERFAMILY SSF52518 344 528 1.09E-67 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold PhaeoP54_01704 99126c267445a89a418c348f05c0e878 673 Pfam PF02780 Transketolase, C-terminal domain 543 663 2.5E-12 T 14-10-2018 IPR033248 Transketolase, C-terminal domain PhaeoP54_01704 99126c267445a89a418c348f05c0e878 673 SUPERFAMILY SSF52518 15 320 6.13E-100 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold PhaeoP54_01704 99126c267445a89a418c348f05c0e878 673 TIGRFAM TIGR00232 tktlase_bact: transketolase 16 672 3.8E-236 T 14-10-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 PhaeoP54_01704 99126c267445a89a418c348f05c0e878 673 Gene3D G3DSA:3.40.50.970 334 535 2.6E-74 T 14-10-2018 PhaeoP54_03088 bff27507982ac63d6f82f34ecca4609d 109 Gene3D G3DSA:3.40.1530.20 1 107 5.3E-29 T 14-10-2018 PhaeoP54_03088 bff27507982ac63d6f82f34ecca4609d 109 Pfam PF07372 Protein of unknown function (DUF1491) 4 104 2.0E-35 T 14-10-2018 IPR009964 Protein of unknown function DUF1491 PhaeoP54_03003 dee9462603e266a8a64c453e27811bee 338 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 27 318 9.0E-116 T 14-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PhaeoP54_03003 dee9462603e266a8a64c453e27811bee 338 SUPERFAMILY SSF55257 6 230 7.07E-29 T 14-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PhaeoP54_03003 dee9462603e266a8a64c453e27811bee 338 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 32 227 1.1E-23 T 14-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PhaeoP54_03003 dee9462603e266a8a64c453e27811bee 338 SMART SM00662 26 233 7.5E-91 T 14-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PhaeoP54_03003 dee9462603e266a8a64c453e27811bee 338 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 6 318 35.416 T 14-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PhaeoP54_03003 dee9462603e266a8a64c453e27811bee 338 Gene3D G3DSA:3.30.1360.10 25 227 6.5E-83 T 14-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PhaeoP54_03003 dee9462603e266a8a64c453e27811bee 338 SUPERFAMILY SSF56553 56 177 2.22E-42 T 14-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PhaeoP54_03003 dee9462603e266a8a64c453e27811bee 338 Gene3D G3DSA:2.170.120.12 56 176 6.5E-83 T 14-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PhaeoP54_03003 dee9462603e266a8a64c453e27811bee 338 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 65 158 2.9E-21 T 14-10-2018 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PhaeoP54_03003 dee9462603e266a8a64c453e27811bee 338 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 252 309 3.1E-25 T 14-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PhaeoP54_03003 dee9462603e266a8a64c453e27811bee 338 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 258 329 6.0E-36 T 14-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PhaeoP54_03003 dee9462603e266a8a64c453e27811bee 338 Gene3D G3DSA:1.10.150.20 246 330 4.9E-37 T 14-10-2018 PhaeoP54_03003 dee9462603e266a8a64c453e27811bee 338 SUPERFAMILY SSF47789 251 328 3.27E-27 T 14-10-2018 PhaeoP54_02623 d613b6b00468401d2ae3642462151014 205 Gene3D G3DSA:1.10.3210.10 17 203 3.2E-58 T 14-10-2018 PhaeoP54_02623 d613b6b00468401d2ae3642462151014 205 Pfam PF01966 HD domain 47 107 2.0E-7 T 14-10-2018 IPR006674 HD domain PhaeoP54_02623 d613b6b00468401d2ae3642462151014 205 SUPERFAMILY SSF109604 55 119 7.46E-8 T 14-10-2018 PhaeoP54_02954 b668fec768373a012123ff249ece136b 959 Gene3D G3DSA:2.150.10.10 514 595 5.8E-11 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal PhaeoP54_02954 b668fec768373a012123ff249ece136b 959 Gene3D G3DSA:2.150.10.10 461 513 4.7E-11 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal PhaeoP54_02954 b668fec768373a012123ff249ece136b 959 Gene3D G3DSA:2.150.10.10 252 320 8.0E-12 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal PhaeoP54_02954 b668fec768373a012123ff249ece136b 959 Gene3D G3DSA:2.150.10.10 3 129 1.2E-10 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal PhaeoP54_02954 b668fec768373a012123ff249ece136b 959 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 446 464 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site PhaeoP54_02954 b668fec768373a012123ff249ece136b 959 Gene3D G3DSA:2.150.10.10 321 369 2.1E-12 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal PhaeoP54_02954 b668fec768373a012123ff249ece136b 959 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 302 320 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site PhaeoP54_02954 b668fec768373a012123ff249ece136b 959 SUPERFAMILY SSF51120 13 110 1.44E-9 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal PhaeoP54_02954 b668fec768373a012123ff249ece136b 959 SUPERFAMILY SSF51294 754 905 1.02E-12 T 14-10-2018 IPR036844 Hint domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 PhaeoP54_02954 b668fec768373a012123ff249ece136b 959 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 293 311 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site PhaeoP54_02954 b668fec768373a012123ff249ece136b 959 SUPERFAMILY SSF51120 369 456 5.76E-18 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal PhaeoP54_02954 b668fec768373a012123ff249ece136b 959 SUPERFAMILY SSF51120 601 756 1.96E-7 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal PhaeoP54_02954 b668fec768373a012123ff249ece136b 959 Pfam PF13403 Hint domain 753 899 1.7E-36 T 14-10-2018 IPR028992 Hedgehog/Intein (Hint) domain PhaeoP54_02954 b668fec768373a012123ff249ece136b 959 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 311 329 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site PhaeoP54_02954 b668fec768373a012123ff249ece136b 959 Gene3D G3DSA:2.150.10.10 601 749 7.4E-6 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal PhaeoP54_02954 b668fec768373a012123ff249ece136b 959 SUPERFAMILY SSF51120 273 391 5.58E-21 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal PhaeoP54_02954 b668fec768373a012123ff249ece136b 959 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 642 660 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site PhaeoP54_02954 b668fec768373a012123ff249ece136b 959 Gene3D G3DSA:2.150.10.10 370 412 5.9E-6 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal PhaeoP54_02954 b668fec768373a012123ff249ece136b 959 SUPERFAMILY SSF51120 496 611 2.09E-21 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal PhaeoP54_02954 b668fec768373a012123ff249ece136b 959 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 422 439 0.04 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_02954 b668fec768373a012123ff249ece136b 959 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 637 653 0.21 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_02954 b668fec768373a012123ff249ece136b 959 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 441 457 0.17 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_02954 b668fec768373a012123ff249ece136b 959 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 539 556 0.69 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_02954 b668fec768373a012123ff249ece136b 959 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 513 529 0.017 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_02954 b668fec768373a012123ff249ece136b 959 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 561 571 17.0 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_02954 b668fec768373a012123ff249ece136b 959 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 387 403 0.037 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_02954 b668fec768373a012123ff249ece136b 959 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 477 493 0.0023 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_02954 b668fec768373a012123ff249ece136b 959 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 43 59 0.17 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_02954 b668fec768373a012123ff249ece136b 959 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 333 349 0.049 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_02954 b668fec768373a012123ff249ece136b 959 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 404 420 3.2 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_02954 b668fec768373a012123ff249ece136b 959 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 25 41 0.13 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_02954 b668fec768373a012123ff249ece136b 959 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 297 313 0.31 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_02954 b668fec768373a012123ff249ece136b 959 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 459 475 0.78 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_02954 b668fec768373a012123ff249ece136b 959 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 279 295 0.036 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_02954 b668fec768373a012123ff249ece136b 959 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 497 511 0.42 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_02954 b668fec768373a012123ff249ece136b 959 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 352 367 0.0062 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_02954 b668fec768373a012123ff249ece136b 959 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 315 331 0.75 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_02954 b668fec768373a012123ff249ece136b 959 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 371 385 0.27 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_02954 b668fec768373a012123ff249ece136b 959 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 320 338 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site PhaeoP54_02954 b668fec768373a012123ff249ece136b 959 PRINTS PR01488 Gram-negative bacterial RTX toxin determinant A family signature 34 55 1.8E-5 T 14-10-2018 IPR003995 RTX toxin determinant A GO:0005509|GO:0005576|GO:0009405 PhaeoP54_02954 b668fec768373a012123ff249ece136b 959 PRINTS PR01488 Gram-negative bacterial RTX toxin determinant A family signature 279 300 1.8E-5 T 14-10-2018 IPR003995 RTX toxin determinant A GO:0005509|GO:0005576|GO:0009405 PhaeoP54_02954 b668fec768373a012123ff249ece136b 959 Gene3D G3DSA:2.150.10.10 413 460 8.7E-11 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal PhaeoP54_02954 b668fec768373a012123ff249ece136b 959 PRINTS PR00313 NodO calcium binding signature 342 350 1.8E-9 T 14-10-2018 PhaeoP54_02954 b668fec768373a012123ff249ece136b 959 PRINTS PR00313 NodO calcium binding signature 378 387 1.8E-9 T 14-10-2018 PhaeoP54_02954 b668fec768373a012123ff249ece136b 959 PRINTS PR00313 NodO calcium binding signature 276 287 1.8E-9 T 14-10-2018 PhaeoP54_02954 b668fec768373a012123ff249ece136b 959 PRINTS PR00313 NodO calcium binding signature 360 368 1.8E-9 T 14-10-2018 PhaeoP54_03401 487cee6ed0f7d6a0c19333a391928af3 541 SUPERFAMILY SSF47794 362 422 1.38E-14 T 14-10-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 PhaeoP54_03401 487cee6ed0f7d6a0c19333a391928af3 541 Gene3D G3DSA:1.10.150.20 438 476 2.0E-5 T 14-10-2018 PhaeoP54_03401 487cee6ed0f7d6a0c19333a391928af3 541 Gene3D G3DSA:3.30.300.20 206 284 1.7E-33 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta PhaeoP54_03401 487cee6ed0f7d6a0c19333a391928af3 541 SUPERFAMILY SSF69705 9 133 7.46E-37 T 14-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 PhaeoP54_03401 487cee6ed0f7d6a0c19333a391928af3 541 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 8 425 29.239 T 14-10-2018 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 PhaeoP54_03401 487cee6ed0f7d6a0c19333a391928af3 541 Pfam PF08529 NusA N-terminal domain 10 132 1.4E-32 T 14-10-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 PhaeoP54_03401 487cee6ed0f7d6a0c19333a391928af3 541 Gene3D G3DSA:2.40.50.140 143 205 3.2E-20 T 14-10-2018 PhaeoP54_03401 487cee6ed0f7d6a0c19333a391928af3 541 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 372 421 3.5E-17 T 14-10-2018 IPR010214 Transcription termination factor NusA, C-terminal duplication PhaeoP54_03401 487cee6ed0f7d6a0c19333a391928af3 541 SUPERFAMILY SSF54814 207 285 9.81E-32 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 PhaeoP54_03401 487cee6ed0f7d6a0c19333a391928af3 541 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 10 349 2.3E-124 T 14-10-2018 IPR010213 Transcription termination factor NusA GO:0003723 PhaeoP54_03401 487cee6ed0f7d6a0c19333a391928af3 541 SMART SM00316 141 207 6.4E-5 T 14-10-2018 IPR022967 RNA-binding domain, S1 PhaeoP54_03401 487cee6ed0f7d6a0c19333a391928af3 541 SUPERFAMILY SSF54814 287 350 3.79E-14 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 PhaeoP54_03401 487cee6ed0f7d6a0c19333a391928af3 541 Gene3D G3DSA:3.30.1480.10 8 135 2.5E-36 T 14-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 PhaeoP54_03401 487cee6ed0f7d6a0c19333a391928af3 541 Pfam PF13184 NusA-like KH domain 237 303 3.0E-26 T 14-10-2018 IPR025249 KH domain, NusA-like GO:0003723 PhaeoP54_03401 487cee6ed0f7d6a0c19333a391928af3 541 Gene3D G3DSA:3.30.300.20 285 354 8.3E-25 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta PhaeoP54_03401 487cee6ed0f7d6a0c19333a391928af3 541 Gene3D G3DSA:1.10.150.20 360 428 1.4E-22 T 14-10-2018 PhaeoP54_03401 487cee6ed0f7d6a0c19333a391928af3 541 SUPERFAMILY SSF50249 139 206 1.04E-15 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold PhaeoP54_03761 dc2133847c35a4f1f5bb2a5a577ed636 298 Gene3D G3DSA:1.10.10.10 2 90 2.9E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_03761 dc2133847c35a4f1f5bb2a5a577ed636 298 Gene3D G3DSA:3.40.190.290 91 293 3.1E-34 T 14-10-2018 PhaeoP54_03761 dc2133847c35a4f1f5bb2a5a577ed636 298 SUPERFAMILY SSF53850 91 292 4.34E-33 T 14-10-2018 PhaeoP54_03761 dc2133847c35a4f1f5bb2a5a577ed636 298 SUPERFAMILY SSF46785 2 108 1.52E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_03761 dc2133847c35a4f1f5bb2a5a577ed636 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 62 1.1E-15 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PhaeoP54_03761 dc2133847c35a4f1f5bb2a5a577ed636 298 Pfam PF03466 LysR substrate binding domain 90 285 7.1E-35 T 14-10-2018 IPR005119 LysR, substrate-binding PhaeoP54_03667 2757993012c4005c766063b3fd484b1f 414 Gene3D G3DSA:1.10.530.10 86 335 2.8E-67 T 14-10-2018 PhaeoP54_03667 2757993012c4005c766063b3fd484b1f 414 Pfam PF13406 Transglycosylase SLT domain 31 336 2.9E-93 T 14-10-2018 IPR031304 Transglycosylase SLT domain 2 PhaeoP54_03667 2757993012c4005c766063b3fd484b1f 414 SUPERFAMILY SSF53955 26 339 6.56E-83 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily PhaeoP54_03667 2757993012c4005c766063b3fd484b1f 414 SUPERFAMILY SSF47090 355 412 1.92E-6 T 14-10-2018 IPR036365 PGBD-like superfamily PhaeoP54_03667 2757993012c4005c766063b3fd484b1f 414 TIGRFAM TIGR02283 MltB_2: lytic murein transglycosylase 31 339 5.4E-101 T 14-10-2018 IPR011970 Lytic murein transglycosylase PhaeoP54_03667 2757993012c4005c766063b3fd484b1f 414 Gene3D G3DSA:1.10.8.350 77 218 2.8E-67 T 14-10-2018 PhaeoP54_02372 166ca68eff86bcd488550b351e113cfb 362 Pfam PF02222 ATP-grasp domain 119 287 2.6E-55 T 14-10-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type PhaeoP54_02372 166ca68eff86bcd488550b351e113cfb 362 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 14 359 1.3E-117 T 14-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 PhaeoP54_02372 166ca68eff86bcd488550b351e113cfb 362 SUPERFAMILY SSF52440 9 107 2.3E-27 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily PhaeoP54_02372 166ca68eff86bcd488550b351e113cfb 362 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 14 361 41.675 T 14-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 PhaeoP54_02372 166ca68eff86bcd488550b351e113cfb 362 SUPERFAMILY SSF56059 110 306 1.77E-62 T 14-10-2018 PhaeoP54_02372 166ca68eff86bcd488550b351e113cfb 362 Gene3D G3DSA:3.30.470.20 189 362 2.3E-65 T 14-10-2018 PhaeoP54_02372 166ca68eff86bcd488550b351e113cfb 362 SUPERFAMILY SSF51246 311 358 3.14E-13 T 14-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 PhaeoP54_02372 166ca68eff86bcd488550b351e113cfb 362 Gene3D G3DSA:3.30.1490.20 115 188 1.2E-26 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 PhaeoP54_02372 166ca68eff86bcd488550b351e113cfb 362 Gene3D G3DSA:3.40.50.20 7 114 3.9E-40 T 14-10-2018 PhaeoP54_01160 54c3bdf26179da50160092029a814ebf 457 SMART SM00283 183 430 4.3E-91 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 PhaeoP54_01160 54c3bdf26179da50160092029a814ebf 457 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 242 398 3.8E-50 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 PhaeoP54_01160 54c3bdf26179da50160092029a814ebf 457 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 23 137 2.8E-13 T 14-10-2018 IPR000014 PAS domain PhaeoP54_01160 54c3bdf26179da50160092029a814ebf 457 Gene3D G3DSA:1.10.287.950 136 431 9.4E-79 T 14-10-2018 PhaeoP54_01160 54c3bdf26179da50160092029a814ebf 457 SMART SM00086 90 132 0.0017 T 14-10-2018 IPR001610 PAC motif PhaeoP54_01160 54c3bdf26179da50160092029a814ebf 457 Pfam PF08447 PAS fold 40 124 3.3E-15 T 14-10-2018 IPR013655 PAS fold-3 GO:0005515 PhaeoP54_01160 54c3bdf26179da50160092029a814ebf 457 SUPERFAMILY SSF58104 150 431 1.09E-69 T 14-10-2018 PhaeoP54_01160 54c3bdf26179da50160092029a814ebf 457 Gene3D G3DSA:3.30.450.20 12 135 2.0E-20 T 14-10-2018 PhaeoP54_01160 54c3bdf26179da50160092029a814ebf 457 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 358 387 9.3E-41 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 PhaeoP54_01160 54c3bdf26179da50160092029a814ebf 457 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 204 233 9.3E-41 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 PhaeoP54_01160 54c3bdf26179da50160092029a814ebf 457 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 281 308 9.3E-41 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 PhaeoP54_01160 54c3bdf26179da50160092029a814ebf 457 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 310 339 9.3E-41 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 PhaeoP54_01160 54c3bdf26179da50160092029a814ebf 457 SMART SM00304 130 182 0.0062 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 PhaeoP54_01160 54c3bdf26179da50160092029a814ebf 457 SUPERFAMILY SSF55785 28 129 3.14E-23 T 14-10-2018 IPR035965 PAS domain superfamily PhaeoP54_03442 27f8a30a6042c1059565ec5bc7054370 384 SUPERFAMILY SSF102114 3 382 1.27E-104 T 14-10-2018 PhaeoP54_03442 27f8a30a6042c1059565ec5bc7054370 384 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 11 350 1.9E-84 T 14-10-2018 IPR004559 Oxygen-independent coproporphyrinogen III oxidase-like GO:0004109|GO:0005737|GO:0006779|GO:0055114 PhaeoP54_03442 27f8a30a6042c1059565ec5bc7054370 384 SMART SM00729 8 227 3.9E-46 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 PhaeoP54_03442 27f8a30a6042c1059565ec5bc7054370 384 Pfam PF04055 Radical SAM superfamily 13 180 1.8E-15 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 PhaeoP54_03442 27f8a30a6042c1059565ec5bc7054370 384 Gene3D G3DSA:3.80.30.20 2 302 1.5E-90 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe PhaeoP54_03442 27f8a30a6042c1059565ec5bc7054370 384 Pfam PF06969 HemN C-terminal domain 310 371 9.1E-10 T 14-10-2018 IPR010723 HemN, C-terminal PhaeoP54_00355 93d11c89ec8450a63c586c5746e657c5 655 Gene3D G3DSA:3.40.50.280 503 655 1.3E-44 T 14-10-2018 PhaeoP54_00355 93d11c89ec8450a63c586c5746e657c5 655 TIGRFAM TIGR00640 acid_CoA_mut_C: methylmalonyl-CoA mutase C-terminal domain 520 642 3.1E-35 T 14-10-2018 IPR006159 Methylmalonyl-CoA mutase, C-terminal GO:0016853 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 PhaeoP54_00355 93d11c89ec8450a63c586c5746e657c5 655 Gene3D G3DSA:3.20.20.240 1 502 1.0E-164 T 14-10-2018 PhaeoP54_00355 93d11c89ec8450a63c586c5746e657c5 655 SUPERFAMILY SSF52242 487 648 3.53E-50 T 14-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 PhaeoP54_00355 93d11c89ec8450a63c586c5746e657c5 655 Pfam PF01642 Methylmalonyl-CoA mutase 2 485 5.1E-126 T 14-10-2018 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic GO:0016866|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 PhaeoP54_00355 93d11c89ec8450a63c586c5746e657c5 655 TIGRFAM TIGR00641 acid_CoA_mut_N: methylmalonyl-CoA mutase N-terminal domain 2 490 6.7E-135 T 14-10-2018 IPR006098 Methylmalonyl-CoA mutase, alpha chain, catalytic GO:0004494|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 PhaeoP54_00355 93d11c89ec8450a63c586c5746e657c5 655 SUPERFAMILY SSF51703 2 487 1.57E-159 T 14-10-2018 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic GO:0003824|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 PhaeoP54_00355 93d11c89ec8450a63c586c5746e657c5 655 Pfam PF02310 B12 binding domain 523 626 2.2E-14 T 14-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 PhaeoP54_02106 da99724c2976860be1656379fd495774 157 Gene3D G3DSA:3.40.630.30 5 155 6.0E-21 T 14-10-2018 PhaeoP54_02106 da99724c2976860be1656379fd495774 157 SUPERFAMILY SSF55729 3 153 5.74E-19 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase PhaeoP54_02106 da99724c2976860be1656379fd495774 157 Pfam PF00583 Acetyltransferase (GNAT) family 24 145 4.0E-10 T 14-10-2018 IPR000182 GNAT domain PhaeoP54_02254 1a372324b387e9f470be74b22c869480 296 SUPERFAMILY SSF46689 191 241 1.3E-7 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PhaeoP54_02254 1a372324b387e9f470be74b22c869480 296 Pfam PF12833 Helix-turn-helix domain 213 288 8.7E-21 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PhaeoP54_02254 1a372324b387e9f470be74b22c869480 296 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 259 274 5.0E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PhaeoP54_02254 1a372324b387e9f470be74b22c869480 296 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 274 290 5.0E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PhaeoP54_02254 1a372324b387e9f470be74b22c869480 296 SUPERFAMILY SSF46689 243 290 8.06E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PhaeoP54_02254 1a372324b387e9f470be74b22c869480 296 Pfam PF06719 AraC-type transcriptional regulator N-terminus 38 178 3.8E-30 T 14-10-2018 IPR009594 Transcription regulator HTH, AraC, N-terminal PhaeoP54_02254 1a372324b387e9f470be74b22c869480 296 Gene3D G3DSA:1.10.10.60 186 295 9.0E-26 T 14-10-2018 PhaeoP54_02254 1a372324b387e9f470be74b22c869480 296 SMART SM00342 207 290 3.5E-25 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PhaeoP54_02254 1a372324b387e9f470be74b22c869480 296 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 244 286 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 PhaeoP54_01831 8992a1ea097c78652d644fd715739b5a 430 PRINTS PR00981 Seryl-tRNA synthetase signature 264 276 1.3E-28 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 PhaeoP54_01831 8992a1ea097c78652d644fd715739b5a 430 PRINTS PR00981 Seryl-tRNA synthetase signature 333 349 1.3E-28 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 PhaeoP54_01831 8992a1ea097c78652d644fd715739b5a 430 PRINTS PR00981 Seryl-tRNA synthetase signature 351 367 1.3E-28 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 PhaeoP54_01831 8992a1ea097c78652d644fd715739b5a 430 PRINTS PR00981 Seryl-tRNA synthetase signature 276 289 1.3E-28 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 PhaeoP54_01831 8992a1ea097c78652d644fd715739b5a 430 PRINTS PR00981 Seryl-tRNA synthetase signature 316 329 1.3E-28 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 PhaeoP54_01831 8992a1ea097c78652d644fd715739b5a 430 SUPERFAMILY SSF55681 118 418 3.42E-88 T 14-10-2018 PhaeoP54_01831 8992a1ea097c78652d644fd715739b5a 430 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 417 3.3E-144 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 PhaeoP54_01831 8992a1ea097c78652d644fd715739b5a 430 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 109 5.5E-25 T 14-10-2018 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: R-HSA-2408557|Reactome: R-HSA-379716 PhaeoP54_01831 8992a1ea097c78652d644fd715739b5a 430 Gene3D G3DSA:1.10.287.40 3 106 6.3E-21 T 14-10-2018 PhaeoP54_01831 8992a1ea097c78652d644fd715739b5a 430 PIRSF PIRSF001529 1 425 4.8E-147 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 PhaeoP54_01831 8992a1ea097c78652d644fd715739b5a 430 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 422 37.19 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 PhaeoP54_01831 8992a1ea097c78652d644fd715739b5a 430 SUPERFAMILY SSF46589 1 114 5.23E-26 T 14-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 PhaeoP54_01831 8992a1ea097c78652d644fd715739b5a 430 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 227 399 5.3E-28 T 14-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 PhaeoP54_01831 8992a1ea097c78652d644fd715739b5a 430 Gene3D G3DSA:3.30.930.10 107 426 2.5E-105 T 14-10-2018 PhaeoP54_00416 148fbeb0b7d9c1d3cf32511b4805d57e 647 SUPERFAMILY SSF53850 79 628 8.14E-77 T 14-10-2018 PhaeoP54_00416 148fbeb0b7d9c1d3cf32511b4805d57e 647 PIRSF PIRSF002741 77 226 2.8E-13 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 PhaeoP54_00416 148fbeb0b7d9c1d3cf32511b4805d57e 647 PIRSF PIRSF002741 563 623 17.0 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 PhaeoP54_00416 148fbeb0b7d9c1d3cf32511b4805d57e 647 PIRSF PIRSF002741 269 535 7.9E-19 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 PhaeoP54_00416 148fbeb0b7d9c1d3cf32511b4805d57e 647 Gene3D G3DSA:3.10.105.10 354 605 1.8E-38 T 14-10-2018 PhaeoP54_00416 148fbeb0b7d9c1d3cf32511b4805d57e 647 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 111 528 2.8E-51 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain PhaeoP54_00416 148fbeb0b7d9c1d3cf32511b4805d57e 647 Gene3D G3DSA:3.40.190.10 74 329 8.6E-29 T 14-10-2018 PhaeoP54_02898 1586e5c0854cbc866d144223b1c41efc 52 TIGRFAM TIGR00847 ccoS: cytochrome oxidase maturation protein, cbb3-type 1 51 1.6E-23 T 14-10-2018 IPR004714 Cytochrome oxidase maturation protein cbb3-type PhaeoP54_02898 1586e5c0854cbc866d144223b1c41efc 52 Pfam PF03597 Cytochrome oxidase maturation protein cbb3-type 2 45 9.8E-20 T 14-10-2018 IPR004714 Cytochrome oxidase maturation protein cbb3-type PhaeoP54_02273 0867d34f6f385da90fb026afe3d8564c 547 TIGRFAM TIGR00337 PyrG: CTP synthase 2 539 7.4E-228 T 14-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 PhaeoP54_02273 0867d34f6f385da90fb026afe3d8564c 547 Gene3D G3DSA:3.40.50.300 1 285 2.2E-118 T 14-10-2018 PhaeoP54_02273 0867d34f6f385da90fb026afe3d8564c 547 Pfam PF00117 Glutamine amidotransferase class-I 301 538 5.5E-57 T 14-10-2018 IPR017926 Glutamine amidotransferase PhaeoP54_02273 0867d34f6f385da90fb026afe3d8564c 547 Hamap MF_01227 CTP synthase [pyrG]. 2 544 49.251 T 14-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 PhaeoP54_02273 0867d34f6f385da90fb026afe3d8564c 547 Gene3D G3DSA:3.40.50.880 286 546 4.7E-101 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like PhaeoP54_02273 0867d34f6f385da90fb026afe3d8564c 547 SUPERFAMILY SSF52540 1 266 1.1E-115 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_02273 0867d34f6f385da90fb026afe3d8564c 547 SUPERFAMILY SSF52317 289 542 1.4E-78 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like PhaeoP54_02273 0867d34f6f385da90fb026afe3d8564c 547 Pfam PF06418 CTP synthase N-terminus 3 264 9.3E-117 T 14-10-2018 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 PhaeoP54_01330 7f4584d12bea374b1320e3be420429b9 476 Pfam PF00067 Cytochrome P450 73 460 3.2E-76 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 PhaeoP54_01330 7f4584d12bea374b1320e3be420429b9 476 SUPERFAMILY SSF48264 46 476 8.64E-99 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 PhaeoP54_01330 7f4584d12bea374b1320e3be420429b9 476 PRINTS PR00463 E-class P450 group I signature 414 424 1.1E-18 T 14-10-2018 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 PhaeoP54_01330 7f4584d12bea374b1320e3be420429b9 476 PRINTS PR00463 E-class P450 group I signature 339 357 1.1E-18 T 14-10-2018 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 PhaeoP54_01330 7f4584d12bea374b1320e3be420429b9 476 PRINTS PR00463 E-class P450 group I signature 280 297 1.1E-18 T 14-10-2018 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 PhaeoP54_01330 7f4584d12bea374b1320e3be420429b9 476 PRINTS PR00463 E-class P450 group I signature 300 326 1.1E-18 T 14-10-2018 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 PhaeoP54_01330 7f4584d12bea374b1320e3be420429b9 476 PRINTS PR00463 E-class P450 group I signature 379 403 1.1E-18 T 14-10-2018 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 PhaeoP54_01330 7f4584d12bea374b1320e3be420429b9 476 PRINTS PR00463 E-class P450 group I signature 424 447 1.1E-18 T 14-10-2018 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 PhaeoP54_01330 7f4584d12bea374b1320e3be420429b9 476 Gene3D G3DSA:1.10.630.10 40 475 1.7E-95 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 PhaeoP54_01330 7f4584d12bea374b1320e3be420429b9 476 PRINTS PR00385 P450 superfamily signature 424 435 2.3E-11 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 PhaeoP54_01330 7f4584d12bea374b1320e3be420429b9 476 PRINTS PR00385 P450 superfamily signature 291 308 2.3E-11 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 PhaeoP54_01330 7f4584d12bea374b1320e3be420429b9 476 PRINTS PR00385 P450 superfamily signature 415 424 2.3E-11 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 PhaeoP54_01330 7f4584d12bea374b1320e3be420429b9 476 PRINTS PR00385 P450 superfamily signature 340 351 2.3E-11 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 PhaeoP54_03883 5ce4f2e6a2e1112fac8e5f2e1f968289 457 Pfam PF01551 Peptidase family M23 315 411 3.0E-29 T 14-10-2018 IPR016047 Peptidase M23 PhaeoP54_03883 5ce4f2e6a2e1112fac8e5f2e1f968289 457 Gene3D G3DSA:2.70.70.10 288 417 9.8E-64 T 14-10-2018 IPR011055 Duplicated hybrid motif PhaeoP54_03883 5ce4f2e6a2e1112fac8e5f2e1f968289 457 Gene3D G3DSA:3.10.450.350 94 171 1.1E-6 T 14-10-2018 PhaeoP54_03883 5ce4f2e6a2e1112fac8e5f2e1f968289 457 Gene3D G3DSA:3.10.450.350 193 419 9.8E-64 T 14-10-2018 PhaeoP54_03883 5ce4f2e6a2e1112fac8e5f2e1f968289 457 SUPERFAMILY SSF51261 168 412 3.61E-54 T 14-10-2018 IPR011055 Duplicated hybrid motif PhaeoP54_04056 4fb6e72740f14c8dba00bfcfd9f6e40f 731 SUPERFAMILY SSF51120 371 488 8.11E-10 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal PhaeoP54_04056 4fb6e72740f14c8dba00bfcfd9f6e40f 731 Gene3D G3DSA:2.130.10.10 181 329 2.2E-5 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 PhaeoP54_04056 4fb6e72740f14c8dba00bfcfd9f6e40f 731 SUPERFAMILY SSF51120 504 573 1.31E-13 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal PhaeoP54_04056 4fb6e72740f14c8dba00bfcfd9f6e40f 731 PRINTS PR00313 NodO calcium binding signature 558 569 1.1E-9 T 14-10-2018 PhaeoP54_04056 4fb6e72740f14c8dba00bfcfd9f6e40f 731 PRINTS PR00313 NodO calcium binding signature 579 587 1.1E-9 T 14-10-2018 PhaeoP54_04056 4fb6e72740f14c8dba00bfcfd9f6e40f 731 PRINTS PR00313 NodO calcium binding signature 642 650 1.1E-9 T 14-10-2018 PhaeoP54_04056 4fb6e72740f14c8dba00bfcfd9f6e40f 731 PRINTS PR00313 NodO calcium binding signature 651 660 1.1E-9 T 14-10-2018 PhaeoP54_04056 4fb6e72740f14c8dba00bfcfd9f6e40f 731 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 638 656 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site PhaeoP54_04056 4fb6e72740f14c8dba00bfcfd9f6e40f 731 Gene3D G3DSA:2.150.10.10 368 485 2.9E-10 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal PhaeoP54_04056 4fb6e72740f14c8dba00bfcfd9f6e40f 731 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 629 647 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site PhaeoP54_04056 4fb6e72740f14c8dba00bfcfd9f6e40f 731 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 578 595 0.11 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_04056 4fb6e72740f14c8dba00bfcfd9f6e40f 731 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 642 658 0.027 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_04056 4fb6e72740f14c8dba00bfcfd9f6e40f 731 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 534 550 0.08 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_04056 4fb6e72740f14c8dba00bfcfd9f6e40f 731 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 624 640 0.23 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_04056 4fb6e72740f14c8dba00bfcfd9f6e40f 731 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 597 613 4.6 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_04056 4fb6e72740f14c8dba00bfcfd9f6e40f 731 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 521 532 27.0 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_04056 4fb6e72740f14c8dba00bfcfd9f6e40f 731 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 551 568 0.067 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_04056 4fb6e72740f14c8dba00bfcfd9f6e40f 731 PRINTS PR01488 Gram-negative bacterial RTX toxin determinant A family signature 408 429 2.8E-7 T 14-10-2018 IPR003995 RTX toxin determinant A GO:0005509|GO:0005576|GO:0009405 PhaeoP54_04056 4fb6e72740f14c8dba00bfcfd9f6e40f 731 PRINTS PR01488 Gram-negative bacterial RTX toxin determinant A family signature 633 654 2.8E-7 T 14-10-2018 IPR003995 RTX toxin determinant A GO:0005509|GO:0005576|GO:0009405 PhaeoP54_04056 4fb6e72740f14c8dba00bfcfd9f6e40f 731 PRINTS PR01488 Gram-negative bacterial RTX toxin determinant A family signature 179 200 2.8E-7 T 14-10-2018 IPR003995 RTX toxin determinant A GO:0005509|GO:0005576|GO:0009405 PhaeoP54_04056 4fb6e72740f14c8dba00bfcfd9f6e40f 731 SUPERFAMILY SSF51120 570 723 1.37E-29 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal PhaeoP54_04056 4fb6e72740f14c8dba00bfcfd9f6e40f 731 Gene3D G3DSA:2.150.10.10 560 607 1.5E-9 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal PhaeoP54_04056 4fb6e72740f14c8dba00bfcfd9f6e40f 731 Gene3D G3DSA:2.150.10.10 608 731 1.1E-27 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal PhaeoP54_04056 4fb6e72740f14c8dba00bfcfd9f6e40f 731 Gene3D G3DSA:2.150.10.10 505 559 9.7E-11 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal PhaeoP54_01789 7d712249e9219c199bbe23b4d27ce864 310 Gene3D G3DSA:3.30.70.250 128 200 4.1E-97 T 14-10-2018 PhaeoP54_01789 7d712249e9219c199bbe23b4d27ce864 310 Pfam PF00698 Acyl transferase domain 5 278 2.9E-39 T 14-10-2018 IPR014043 Acyl transferase PhaeoP54_01789 7d712249e9219c199bbe23b4d27ce864 310 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 1 292 2.3E-102 T 14-10-2018 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 PhaeoP54_01789 7d712249e9219c199bbe23b4d27ce864 310 Gene3D G3DSA:3.40.366.10 5 287 4.1E-97 T 14-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 PhaeoP54_01789 7d712249e9219c199bbe23b4d27ce864 310 SUPERFAMILY SSF55048 129 198 7.98E-18 T 14-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding PhaeoP54_01789 7d712249e9219c199bbe23b4d27ce864 310 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 6 310 3.7E-39 T 14-10-2018 IPR020801 Polyketide synthase, acyl transferase domain PhaeoP54_01789 7d712249e9219c199bbe23b4d27ce864 310 SUPERFAMILY SSF52151 2 306 2.43E-73 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase PhaeoP54_01789 7d712249e9219c199bbe23b4d27ce864 310 PIRSF PIRSF000446 1 309 3.2E-101 T 14-10-2018 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 PhaeoP54_03360 0fe49e7e421d3ebb11a71454f0d5f7f2 602 Gene3D G3DSA:2.30.40.10 19 369 8.4E-122 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 PhaeoP54_03360 0fe49e7e421d3ebb11a71454f0d5f7f2 602 Pfam PF01979 Amidohydrolase family 80 367 1.8E-22 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 PhaeoP54_03360 0fe49e7e421d3ebb11a71454f0d5f7f2 602 SUPERFAMILY SSF51338 18 381 6.48E-20 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 PhaeoP54_03360 0fe49e7e421d3ebb11a71454f0d5f7f2 602 Hamap MF_01518 Adenine deaminase [ade]. 27 594 35.372 T 14-10-2018 IPR006679 Adenine deaminase GO:0000034|GO:0006146 KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 PhaeoP54_03360 0fe49e7e421d3ebb11a71454f0d5f7f2 602 Pfam PF13382 Adenine deaminase C-terminal domain 426 591 6.3E-58 T 14-10-2018 IPR026912 Adenine deaminase C-terminal domain KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 PhaeoP54_03360 0fe49e7e421d3ebb11a71454f0d5f7f2 602 SUPERFAMILY SSF51556 84 333 2.04E-22 T 14-10-2018 IPR032466 Metal-dependent hydrolase PhaeoP54_03360 0fe49e7e421d3ebb11a71454f0d5f7f2 602 Gene3D G3DSA:3.20.20.140 84 331 8.4E-122 T 14-10-2018 PhaeoP54_03360 0fe49e7e421d3ebb11a71454f0d5f7f2 602 TIGRFAM TIGR01178 ade: adenine deaminase 28 593 5.0E-145 T 14-10-2018 IPR006679 Adenine deaminase GO:0000034|GO:0006146 KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 PhaeoP54_01680 756459bdb7e6678344d4f366d454a454 466 Gene3D G3DSA:1.10.10.350 370 465 1.3E-20 T 14-10-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 PhaeoP54_01680 756459bdb7e6678344d4f366d454a454 466 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 5 306 2.2E-92 T 14-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 PhaeoP54_01680 756459bdb7e6678344d4f366d454a454 466 PRINTS PR00987 Glutamyl-tRNA synthetase signature 8 20 3.8E-27 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 PhaeoP54_01680 756459bdb7e6678344d4f366d454a454 466 PRINTS PR00987 Glutamyl-tRNA synthetase signature 197 205 3.8E-27 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 PhaeoP54_01680 756459bdb7e6678344d4f366d454a454 466 PRINTS PR00987 Glutamyl-tRNA synthetase signature 22 33 3.8E-27 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 PhaeoP54_01680 756459bdb7e6678344d4f366d454a454 466 PRINTS PR00987 Glutamyl-tRNA synthetase signature 37 50 3.8E-27 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 PhaeoP54_01680 756459bdb7e6678344d4f366d454a454 466 PRINTS PR00987 Glutamyl-tRNA synthetase signature 181 191 3.8E-27 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 PhaeoP54_01680 756459bdb7e6678344d4f366d454a454 466 SUPERFAMILY SSF48163 301 463 1.23E-36 T 14-10-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 PhaeoP54_01680 756459bdb7e6678344d4f366d454a454 466 Hamap MF_00022 Glutamate--tRNA ligase [gltX]. 4 465 28.376 T 14-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 PhaeoP54_01680 756459bdb7e6678344d4f366d454a454 466 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 5 462 3.6E-139 T 14-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 PhaeoP54_01680 756459bdb7e6678344d4f366d454a454 466 SUPERFAMILY SSF52374 4 300 1.37E-103 T 14-10-2018 PhaeoP54_01680 756459bdb7e6678344d4f366d454a454 466 Gene3D G3DSA:3.40.50.620 3 315 1.1E-120 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PhaeoP54_01680 756459bdb7e6678344d4f366d454a454 466 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 11 22 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 PhaeoP54_00447 466acf5de1b7a6eb1effff3be33a06fa 176 Pfam PF02130 Uncharacterized protein family UPF0054 15 157 2.0E-33 T 14-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 PhaeoP54_00447 466acf5de1b7a6eb1effff3be33a06fa 176 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 40 158 3.1E-31 T 14-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 PhaeoP54_00447 466acf5de1b7a6eb1effff3be33a06fa 176 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 2 162 21.527 T 14-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 PhaeoP54_00447 466acf5de1b7a6eb1effff3be33a06fa 176 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 128 138 - T 14-10-2018 IPR020549 Endoribonuclease YbeY, conserved site PhaeoP54_00447 466acf5de1b7a6eb1effff3be33a06fa 176 Gene3D G3DSA:3.40.390.30 1 168 8.2E-42 T 14-10-2018 IPR023091 Metalloprotease catalytic domain superfamily, predicted GO:0004222 PhaeoP54_00447 466acf5de1b7a6eb1effff3be33a06fa 176 SUPERFAMILY SSF55486 3 164 1.78E-42 T 14-10-2018 PhaeoP54_00796 3259c9f6a0be193de7dbe69b9a5cfbc0 546 PIRSF PIRSF028099 56 546 1.3E-174 T 14-10-2018 IPR010538 Di-haem oxidoreductase, putative peroxidase PhaeoP54_00796 3259c9f6a0be193de7dbe69b9a5cfbc0 546 Pfam PF06537 Di-haem oxidoreductase, putative peroxidase 104 546 6.2E-128 T 14-10-2018 IPR010538 Di-haem oxidoreductase, putative peroxidase PhaeoP54_00796 3259c9f6a0be193de7dbe69b9a5cfbc0 546 Gene3D G3DSA:1.10.760.10 410 546 2.8E-9 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PhaeoP54_00796 3259c9f6a0be193de7dbe69b9a5cfbc0 546 SUPERFAMILY SSF46626 405 546 1.06E-25 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PhaeoP54_02395 d221e14f692d054e95147668627879bc 293 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 2 293 6.5E-103 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 PhaeoP54_02395 d221e14f692d054e95147668627879bc 293 PIRSF PIRSF039089 1 293 1.4E-104 T 14-10-2018 PhaeoP54_02395 d221e14f692d054e95147668627879bc 293 Gene3D G3DSA:3.40.1380.10 27 252 2.1E-93 T 14-10-2018 PhaeoP54_02395 d221e14f692d054e95147668627879bc 293 PRINTS PR00126 ATP synthase gamma subunit signature 76 95 1.1E-31 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 PhaeoP54_02395 d221e14f692d054e95147668627879bc 293 PRINTS PR00126 ATP synthase gamma subunit signature 271 292 1.1E-31 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 PhaeoP54_02395 d221e14f692d054e95147668627879bc 293 PRINTS PR00126 ATP synthase gamma subunit signature 240 259 1.1E-31 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 PhaeoP54_02395 d221e14f692d054e95147668627879bc 293 PRINTS PR00126 ATP synthase gamma subunit signature 171 188 1.1E-31 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 PhaeoP54_02395 d221e14f692d054e95147668627879bc 293 SUPERFAMILY SSF52943 2 293 1.83E-87 T 14-10-2018 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 PhaeoP54_02395 d221e14f692d054e95147668627879bc 293 Pfam PF00231 ATP synthase 3 293 1.1E-93 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 PhaeoP54_02395 d221e14f692d054e95147668627879bc 293 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 293 33.5 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 PhaeoP54_02395 d221e14f692d054e95147668627879bc 293 Gene3D G3DSA:1.10.287.80 5 292 2.1E-93 T 14-10-2018 PhaeoP54_02395 d221e14f692d054e95147668627879bc 293 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 279 292 - T 14-10-2018 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 PhaeoP54_00758 3caf582ccedb8d9dfcf494368c701b07 221 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 218 1.3E-19 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PhaeoP54_00758 3caf582ccedb8d9dfcf494368c701b07 221 Gene3D G3DSA:3.40.50.2300 1 122 1.2E-35 T 14-10-2018 PhaeoP54_00758 3caf582ccedb8d9dfcf494368c701b07 221 SMART SM00862 145 218 5.9E-19 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PhaeoP54_00758 3caf582ccedb8d9dfcf494368c701b07 221 Gene3D G3DSA:1.10.10.10 123 221 5.6E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_00758 3caf582ccedb8d9dfcf494368c701b07 221 Pfam PF00072 Response regulator receiver domain 4 111 8.2E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PhaeoP54_00758 3caf582ccedb8d9dfcf494368c701b07 221 SUPERFAMILY SSF52172 1 178 1.46E-35 T 14-10-2018 IPR011006 CheY-like superfamily PhaeoP54_00758 3caf582ccedb8d9dfcf494368c701b07 221 SMART SM00448 1 112 7.3E-33 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PhaeoP54_02498 990d841b6098c956299cc499d1c1a6b5 165 Gene3D G3DSA:1.10.10.10 2 143 2.7E-34 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_02498 990d841b6098c956299cc499d1c1a6b5 165 SMART SM00347 26 126 2.6E-19 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PhaeoP54_02498 990d841b6098c956299cc499d1c1a6b5 165 Pfam PF01047 MarR family 38 89 4.6E-11 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PhaeoP54_02498 990d841b6098c956299cc499d1c1a6b5 165 ProSitePatterns PS01117 MarR-type HTH domain signature. 65 99 - T 14-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site PhaeoP54_02498 990d841b6098c956299cc499d1c1a6b5 165 PRINTS PR00598 Bacterial regulatory protein MarR family signature 86 102 9.6E-12 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PhaeoP54_02498 990d841b6098c956299cc499d1c1a6b5 165 PRINTS PR00598 Bacterial regulatory protein MarR family signature 50 66 9.6E-12 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PhaeoP54_02498 990d841b6098c956299cc499d1c1a6b5 165 PRINTS PR00598 Bacterial regulatory protein MarR family signature 116 136 9.6E-12 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PhaeoP54_02498 990d841b6098c956299cc499d1c1a6b5 165 PRINTS PR00598 Bacterial regulatory protein MarR family signature 67 82 9.6E-12 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PhaeoP54_02498 990d841b6098c956299cc499d1c1a6b5 165 SUPERFAMILY SSF46785 5 140 2.32E-33 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_01033 f65d5ac2a5504e28497745c693e85938 535 Hamap MF_00072 Peptide chain release factor 3 [prfC]. 9 531 49.235 T 14-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 PhaeoP54_01033 f65d5ac2a5504e28497745c693e85938 535 Pfam PF16658 Class II release factor RF3, C-terminal domain 394 518 9.2E-40 T 14-10-2018 IPR032090 Peptide chain release factor 3, C-terminal PhaeoP54_01033 f65d5ac2a5504e28497745c693e85938 535 SUPERFAMILY SSF50447 267 398 5.42E-26 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily PhaeoP54_01033 f65d5ac2a5504e28497745c693e85938 535 Gene3D G3DSA:3.30.70.3280 395 534 8.1E-43 T 14-10-2018 IPR038467 Peptide chain release factor 3, C-terminal domain superfamily PhaeoP54_01033 f65d5ac2a5504e28497745c693e85938 535 SUPERFAMILY SSF54980 398 470 8.27E-13 T 14-10-2018 IPR035647 EF-G domain III/V-like PhaeoP54_01033 f65d5ac2a5504e28497745c693e85938 535 Pfam PF00009 Elongation factor Tu GTP binding domain 18 281 6.3E-49 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PhaeoP54_01033 f65d5ac2a5504e28497745c693e85938 535 Gene3D G3DSA:3.40.50.300 115 280 2.2E-105 T 14-10-2018 PhaeoP54_01033 f65d5ac2a5504e28497745c693e85938 535 Gene3D G3DSA:3.40.50.300 78 384 2.2E-105 T 14-10-2018 PhaeoP54_01033 f65d5ac2a5504e28497745c693e85938 535 PRINTS PR00315 GTP-binding elongation factor signature 90 100 6.2E-12 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PhaeoP54_01033 f65d5ac2a5504e28497745c693e85938 535 PRINTS PR00315 GTP-binding elongation factor signature 70 78 6.2E-12 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PhaeoP54_01033 f65d5ac2a5504e28497745c693e85938 535 PRINTS PR00315 GTP-binding elongation factor signature 106 117 6.2E-12 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PhaeoP54_01033 f65d5ac2a5504e28497745c693e85938 535 PRINTS PR00315 GTP-binding elongation factor signature 142 151 6.2E-12 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PhaeoP54_01033 f65d5ac2a5504e28497745c693e85938 535 PRINTS PR00315 GTP-binding elongation factor signature 20 33 6.2E-12 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PhaeoP54_01033 f65d5ac2a5504e28497745c693e85938 535 TIGRFAM TIGR00503 prfC: peptide chain release factor 3 13 532 9.2E-197 T 14-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 PhaeoP54_01033 f65d5ac2a5504e28497745c693e85938 535 SUPERFAMILY SSF52540 14 282 9.73E-83 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_01033 f65d5ac2a5504e28497745c693e85938 535 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 21 165 5.0E-22 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 PhaeoP54_01033 f65d5ac2a5504e28497745c693e85938 535 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 63 78 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site PhaeoP54_01033 f65d5ac2a5504e28497745c693e85938 535 Pfam PF03144 Elongation factor Tu domain 2 319 385 1.7E-8 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 PhaeoP54_00666 a0303d8d80565169c9615f3af3ae69e1 273 SUPERFAMILY SSF53474 49 263 2.37E-21 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold PhaeoP54_00666 a0303d8d80565169c9615f3af3ae69e1 273 Gene3D G3DSA:3.40.50.1820 26 266 1.9E-27 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold PhaeoP54_03145 e5b15582a24ca6ff23676ea834479e18 123 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 1 115 2.2E-45 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PhaeoP54_03145 e5b15582a24ca6ff23676ea834479e18 123 SUPERFAMILY SSF50104 1 118 1.4E-42 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily PhaeoP54_03145 e5b15582a24ca6ff23676ea834479e18 123 PIRSF PIRSF002191 1 123 4.1E-53 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PhaeoP54_03145 e5b15582a24ca6ff23676ea834479e18 123 Gene3D G3DSA:2.30.30.790 8 120 1.5E-13 T 14-10-2018 IPR038657 Ribosomal protein L19 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PhaeoP54_03145 e5b15582a24ca6ff23676ea834479e18 123 PRINTS PR00061 Ribosomal protein L19 signature 91 116 1.0E-27 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PhaeoP54_03145 e5b15582a24ca6ff23676ea834479e18 123 PRINTS PR00061 Ribosomal protein L19 signature 36 65 1.0E-27 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PhaeoP54_03145 e5b15582a24ca6ff23676ea834479e18 123 PRINTS PR00061 Ribosomal protein L19 signature 6 35 1.0E-27 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PhaeoP54_03145 e5b15582a24ca6ff23676ea834479e18 123 ProSitePatterns PS01015 Ribosomal protein L19 signature. 89 104 - T 14-10-2018 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 PhaeoP54_03145 e5b15582a24ca6ff23676ea834479e18 123 Pfam PF01245 Ribosomal protein L19 3 115 6.7E-46 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PhaeoP54_03145 e5b15582a24ca6ff23676ea834479e18 123 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 1 117 29.641 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PhaeoP54_00701 312f24491dea6f210ea27a7d664397c1 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 160 179 9.4E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_00701 312f24491dea6f210ea27a7d664397c1 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 87 98 9.4E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_00701 312f24491dea6f210ea27a7d664397c1 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 140 148 9.4E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_00701 312f24491dea6f210ea27a7d664397c1 256 SUPERFAMILY SSF51735 12 254 3.84E-73 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PhaeoP54_00701 312f24491dea6f210ea27a7d664397c1 256 Gene3D G3DSA:3.40.50.720 2 255 1.7E-70 T 14-10-2018 PhaeoP54_00701 312f24491dea6f210ea27a7d664397c1 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 87 98 3.5E-27 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_00701 312f24491dea6f210ea27a7d664397c1 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 14 31 3.5E-27 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_00701 312f24491dea6f210ea27a7d664397c1 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 236 3.5E-27 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_00701 312f24491dea6f210ea27a7d664397c1 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 160 179 3.5E-27 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_00701 312f24491dea6f210ea27a7d664397c1 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 181 198 3.5E-27 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_00701 312f24491dea6f210ea27a7d664397c1 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 134 150 3.5E-27 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_00701 312f24491dea6f210ea27a7d664397c1 256 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 13 205 1.2E-4 T 14-10-2018 PhaeoP54_00701 312f24491dea6f210ea27a7d664397c1 256 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 22 252 1.1E-56 T 14-10-2018 PhaeoP54_00097 0fd8e1e4534b6c7e948f2e7b1d112619 1042 Gene3D G3DSA:3.40.50.300 342 491 3.2E-15 T 14-10-2018 PhaeoP54_00097 0fd8e1e4534b6c7e948f2e7b1d112619 1042 Gene3D G3DSA:1.20.1560.10 2 317 9.6E-36 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 PhaeoP54_00097 0fd8e1e4534b6c7e948f2e7b1d112619 1042 SUPERFAMILY SSF51206 877 1008 2.23E-22 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like PhaeoP54_00097 0fd8e1e4534b6c7e948f2e7b1d112619 1042 Gene3D G3DSA:3.40.50.300 681 872 1.2E-11 T 14-10-2018 PhaeoP54_00097 0fd8e1e4534b6c7e948f2e7b1d112619 1042 Gene3D G3DSA:2.60.120.10 874 1014 3.3E-22 T 14-10-2018 IPR014710 RmlC-like jelly roll fold PhaeoP54_00097 0fd8e1e4534b6c7e948f2e7b1d112619 1042 Pfam PF00664 ABC transporter transmembrane region 63 290 8.1E-20 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 PhaeoP54_00097 0fd8e1e4534b6c7e948f2e7b1d112619 1042 SUPERFAMILY SSF52540 705 854 1.35E-9 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_00097 0fd8e1e4534b6c7e948f2e7b1d112619 1042 SMART SM00100 884 1002 1.5E-7 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain PhaeoP54_00097 0fd8e1e4534b6c7e948f2e7b1d112619 1042 Pfam PF00027 Cyclic nucleotide-binding domain 905 989 8.6E-12 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain PhaeoP54_00097 0fd8e1e4534b6c7e948f2e7b1d112619 1042 SUPERFAMILY SSF90123 5 310 8.37E-41 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 PhaeoP54_00097 0fd8e1e4534b6c7e948f2e7b1d112619 1042 SUPERFAMILY SSF52540 340 448 4.28E-12 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_00871 460beaa85f0901b11e3381d361020cf6 298 SUPERFAMILY SSF88659 194 287 9.35E-20 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like PhaeoP54_00871 460beaa85f0901b11e3381d361020cf6 298 Gene3D G3DSA:1.20.140.160 138 288 6.8E-14 T 14-10-2018 PhaeoP54_00871 460beaa85f0901b11e3381d361020cf6 298 Pfam PF04545 Sigma-70, region 4 232 283 1.6E-15 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 PhaeoP54_00871 460beaa85f0901b11e3381d361020cf6 298 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 50 285 3.4E-31 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 PhaeoP54_00871 460beaa85f0901b11e3381d361020cf6 298 PRINTS PR00046 Major sigma-70 factor signature 236 248 8.9E-21 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 PhaeoP54_00871 460beaa85f0901b11e3381d361020cf6 298 PRINTS PR00046 Major sigma-70 factor signature 101 109 8.9E-21 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 PhaeoP54_00871 460beaa85f0901b11e3381d361020cf6 298 PRINTS PR00046 Major sigma-70 factor signature 270 281 8.9E-21 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 PhaeoP54_00871 460beaa85f0901b11e3381d361020cf6 298 PRINTS PR00046 Major sigma-70 factor signature 255 270 8.9E-21 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 PhaeoP54_00871 460beaa85f0901b11e3381d361020cf6 298 PRINTS PR00046 Major sigma-70 factor signature 77 90 8.9E-21 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 PhaeoP54_00871 460beaa85f0901b11e3381d361020cf6 298 SUPERFAMILY SSF88946 12 121 2.04E-37 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 PhaeoP54_00871 460beaa85f0901b11e3381d361020cf6 298 Pfam PF00140 Sigma-70 factor, region 1.2 18 41 2.8E-8 T 14-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PhaeoP54_00871 460beaa85f0901b11e3381d361020cf6 298 Gene3D G3DSA:1.20.120.1810 29 120 3.8E-27 T 14-10-2018 PhaeoP54_00871 460beaa85f0901b11e3381d361020cf6 298 Pfam PF04542 Sigma-70 region 2 53 121 6.8E-16 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 PhaeoP54_00871 460beaa85f0901b11e3381d361020cf6 298 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 255 281 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 PhaeoP54_00871 460beaa85f0901b11e3381d361020cf6 298 Hamap MF_00961 RNA polymerase sigma factor RpoH [rpoH]. 2 287 50.929 T 14-10-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003700|GO:0006352|GO:0006355|GO:0016987 PhaeoP54_00871 460beaa85f0901b11e3381d361020cf6 298 PIRSF PIRSF000770 13 296 4.2E-38 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 PhaeoP54_00871 460beaa85f0901b11e3381d361020cf6 298 TIGRFAM TIGR02392 rpoH_proteo: alternative sigma factor RpoH 15 286 2.1E-110 T 14-10-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003700|GO:0006352|GO:0006355|GO:0016987 PhaeoP54_04057 62b56372a721fef8b00b1f19121e58a4 483 PRINTS PR01488 Gram-negative bacterial RTX toxin determinant A family signature 55 75 1.4E-5 T 14-10-2018 IPR003995 RTX toxin determinant A GO:0005509|GO:0005576|GO:0009405 PhaeoP54_04057 62b56372a721fef8b00b1f19121e58a4 483 PRINTS PR01488 Gram-negative bacterial RTX toxin determinant A family signature 387 408 1.4E-5 T 14-10-2018 IPR003995 RTX toxin determinant A GO:0005509|GO:0005576|GO:0009405 PhaeoP54_04057 62b56372a721fef8b00b1f19121e58a4 483 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 374 392 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site PhaeoP54_04057 62b56372a721fef8b00b1f19121e58a4 483 PRINTS PR00313 NodO calcium binding signature 387 395 1.6E-10 T 14-10-2018 PhaeoP54_04057 62b56372a721fef8b00b1f19121e58a4 483 PRINTS PR00313 NodO calcium binding signature 321 332 1.6E-10 T 14-10-2018 PhaeoP54_04057 62b56372a721fef8b00b1f19121e58a4 483 PRINTS PR00313 NodO calcium binding signature 396 404 1.6E-10 T 14-10-2018 PhaeoP54_04057 62b56372a721fef8b00b1f19121e58a4 483 PRINTS PR00313 NodO calcium binding signature 405 414 1.6E-10 T 14-10-2018 PhaeoP54_04057 62b56372a721fef8b00b1f19121e58a4 483 Gene3D G3DSA:3.40.390.10 59 222 1.9E-53 T 14-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 PhaeoP54_04057 62b56372a721fef8b00b1f19121e58a4 483 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 359 376 0.027 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_04057 62b56372a721fef8b00b1f19121e58a4 483 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 396 412 0.13 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_04057 62b56372a721fef8b00b1f19121e58a4 483 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 377 394 0.0061 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_04057 62b56372a721fef8b00b1f19121e58a4 483 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 342 358 20.0 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_04057 62b56372a721fef8b00b1f19121e58a4 483 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 323 338 0.44 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_04057 62b56372a721fef8b00b1f19121e58a4 483 SUPERFAMILY SSF51120 355 483 2.75E-24 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal PhaeoP54_04057 62b56372a721fef8b00b1f19121e58a4 483 SUPERFAMILY SSF55486 11 218 5.78E-26 T 14-10-2018 PhaeoP54_04057 62b56372a721fef8b00b1f19121e58a4 483 SUPERFAMILY SSF51120 237 368 2.49E-14 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal PhaeoP54_04057 62b56372a721fef8b00b1f19121e58a4 483 Pfam PF08548 Peptidase M10 serralysin C terminal 260 435 7.6E-14 T 14-10-2018 IPR013858 Peptidase M10 serralysin, C-terminal GO:0005509|GO:0005615 PhaeoP54_04057 62b56372a721fef8b00b1f19121e58a4 483 Gene3D G3DSA:2.150.10.10 365 483 1.7E-26 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal PhaeoP54_04057 62b56372a721fef8b00b1f19121e58a4 483 Gene3D G3DSA:2.150.10.10 223 364 1.9E-53 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal PhaeoP54_04057 62b56372a721fef8b00b1f19121e58a4 483 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 383 401 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site PhaeoP54_02925 86e85c0e115cbf0d27b9e8c338d93470 199 TIGRFAM TIGR00615 recR: recombination protein RecR 5 197 4.1E-59 T 14-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 PhaeoP54_02925 86e85c0e115cbf0d27b9e8c338d93470 199 Hamap MF_00017 Recombination protein RecR [recR]. 1 199 84.547 T 14-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 PhaeoP54_02925 86e85c0e115cbf0d27b9e8c338d93470 199 Gene3D G3DSA:3.40.1360.10 79 199 3.4E-39 T 14-10-2018 PhaeoP54_02925 86e85c0e115cbf0d27b9e8c338d93470 199 SUPERFAMILY SSF111304 7 199 4.84E-63 T 14-10-2018 IPR023627 Recombination protein RecR PhaeoP54_02925 86e85c0e115cbf0d27b9e8c338d93470 199 SMART SM00493 82 167 2.6E-6 T 14-10-2018 IPR006171 TOPRIM domain PhaeoP54_02925 86e85c0e115cbf0d27b9e8c338d93470 199 Pfam PF02132 RecR protein 44 79 4.1E-9 T 14-10-2018 IPR023628 Recombination protein RecR, C4-type zinc finger PhaeoP54_02925 86e85c0e115cbf0d27b9e8c338d93470 199 Gene3D G3DSA:1.10.8.420 4 54 9.2E-9 T 14-10-2018 PhaeoP54_02925 86e85c0e115cbf0d27b9e8c338d93470 199 Pfam PF13662 Toprim domain 83 170 6.1E-24 T 14-10-2018 IPR006171 TOPRIM domain PhaeoP54_00556 ea45acb2d716012995f6a6e27c3a7d29 165 SUPERFAMILY SSF53098 1 154 9.86E-53 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily PhaeoP54_00556 ea45acb2d716012995f6a6e27c3a7d29 165 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 3 150 1.5E-43 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 PhaeoP54_00556 ea45acb2d716012995f6a6e27c3a7d29 165 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 3 149 2.6E-44 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 PhaeoP54_00556 ea45acb2d716012995f6a6e27c3a7d29 165 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 112 146 - T 14-10-2018 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 PhaeoP54_00556 ea45acb2d716012995f6a6e27c3a7d29 165 Gene3D G3DSA:3.30.420.10 1 155 8.3E-46 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 PhaeoP54_00556 ea45acb2d716012995f6a6e27c3a7d29 165 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 4 17 1.4E-32 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 PhaeoP54_00556 ea45acb2d716012995f6a6e27c3a7d29 165 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 60 76 1.4E-32 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 PhaeoP54_00556 ea45acb2d716012995f6a6e27c3a7d29 165 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 137 149 1.4E-32 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 PhaeoP54_00556 ea45acb2d716012995f6a6e27c3a7d29 165 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 82 98 1.4E-32 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 PhaeoP54_00556 ea45acb2d716012995f6a6e27c3a7d29 165 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 106 125 1.4E-32 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 PhaeoP54_00556 ea45acb2d716012995f6a6e27c3a7d29 165 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 1 152 46.158 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 PhaeoP54_00645 7eb799bd7c35bd4bd7d051dada3cd31e 223 Pfam PF03099 Biotin/lipoate A/B protein ligase family 68 170 2.7E-7 T 14-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 PhaeoP54_00645 7eb799bd7c35bd4bd7d051dada3cd31e 223 Hamap MF_00013 Octanoyltransferase [lipB]. 2 217 33.994 T 14-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 PhaeoP54_00645 7eb799bd7c35bd4bd7d051dada3cd31e 223 PIRSF PIRSF016262 1 220 4.4E-56 T 14-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 PhaeoP54_00645 7eb799bd7c35bd4bd7d051dada3cd31e 223 SUPERFAMILY SSF55681 5 211 7.62E-65 T 14-10-2018 PhaeoP54_00645 7eb799bd7c35bd4bd7d051dada3cd31e 223 ProSitePatterns PS01313 Lipoate-protein ligase B signature. 69 84 - T 14-10-2018 IPR020605 Octanoyltransferase, conserved site GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 PhaeoP54_00645 7eb799bd7c35bd4bd7d051dada3cd31e 223 Gene3D G3DSA:3.30.930.10 2 214 5.4E-63 T 14-10-2018 PhaeoP54_00645 7eb799bd7c35bd4bd7d051dada3cd31e 223 TIGRFAM TIGR00214 lipB: lipoyl(octanoyl) transferase 32 194 1.2E-43 T 14-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 PhaeoP54_00645 7eb799bd7c35bd4bd7d051dada3cd31e 223 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 74 126 3.0E-22 T 14-10-2018 PhaeoP54_02785 999db82d92f30f2ac56d249a1133480d 946 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 19 73 3.0E-13 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PhaeoP54_02785 999db82d92f30f2ac56d249a1133480d 946 Gene3D G3DSA:3.40.50.740 470 649 4.0E-11 T 14-10-2018 PhaeoP54_02785 999db82d92f30f2ac56d249a1133480d 946 Gene3D G3DSA:3.40.50.740 80 159 1.4E-40 T 14-10-2018 PhaeoP54_02785 999db82d92f30f2ac56d249a1133480d 946 Gene3D G3DSA:3.40.228.10 160 263 1.4E-40 T 14-10-2018 PhaeoP54_02785 999db82d92f30f2ac56d249a1133480d 946 SUPERFAMILY SSF53706 11 753 4.45E-132 T 14-10-2018 PhaeoP54_02785 999db82d92f30f2ac56d249a1133480d 946 Gene3D G3DSA:2.40.40.20 753 918 6.8E-17 T 14-10-2018 PhaeoP54_02785 999db82d92f30f2ac56d249a1133480d 946 Gene3D G3DSA:2.20.25.90 14 79 1.9E-15 T 14-10-2018 PhaeoP54_02785 999db82d92f30f2ac56d249a1133480d 946 SUPERFAMILY SSF50692 764 916 1.85E-28 T 14-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily PhaeoP54_02785 999db82d92f30f2ac56d249a1133480d 946 Pfam PF01568 Molydopterin dinucleotide binding domain 778 854 9.8E-7 T 14-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 PhaeoP54_02785 999db82d92f30f2ac56d249a1133480d 946 Pfam PF00384 Molybdopterin oxidoreductase 78 592 2.2E-29 T 14-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PhaeoP54_02785 999db82d92f30f2ac56d249a1133480d 946 Gene3D G3DSA:3.40.228.10 313 444 1.0E-11 T 14-10-2018 PhaeoP54_02785 999db82d92f30f2ac56d249a1133480d 946 SMART SM00926 16 75 5.9E-18 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PhaeoP54_01743 c3ef20f3f8cc271620c341637368c2b9 498 Gene3D G3DSA:2.150.10.10 252 296 2.8E-7 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal PhaeoP54_01743 c3ef20f3f8cc271620c341637368c2b9 498 Gene3D G3DSA:2.150.10.10 297 342 6.1E-11 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal PhaeoP54_01743 c3ef20f3f8cc271620c341637368c2b9 498 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 346 364 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site PhaeoP54_01743 c3ef20f3f8cc271620c341637368c2b9 498 SUPERFAMILY SSF51120 101 176 1.83E-9 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal PhaeoP54_01743 c3ef20f3f8cc271620c341637368c2b9 498 Gene3D G3DSA:2.150.10.10 180 251 2.0E-9 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal PhaeoP54_01743 c3ef20f3f8cc271620c341637368c2b9 498 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 126 144 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site PhaeoP54_01743 c3ef20f3f8cc271620c341637368c2b9 498 PRINTS PR00313 NodO calcium binding signature 277 288 5.2E-11 T 14-10-2018 PhaeoP54_01743 c3ef20f3f8cc271620c341637368c2b9 498 PRINTS PR00313 NodO calcium binding signature 332 340 5.2E-11 T 14-10-2018 PhaeoP54_01743 c3ef20f3f8cc271620c341637368c2b9 498 PRINTS PR00313 NodO calcium binding signature 377 386 5.2E-11 T 14-10-2018 PhaeoP54_01743 c3ef20f3f8cc271620c341637368c2b9 498 PRINTS PR00313 NodO calcium binding signature 368 376 5.2E-11 T 14-10-2018 PhaeoP54_01743 c3ef20f3f8cc271620c341637368c2b9 498 SUPERFAMILY SSF51120 188 296 1.31E-17 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal PhaeoP54_01743 c3ef20f3f8cc271620c341637368c2b9 498 SUPERFAMILY SSF51120 310 490 4.19E-32 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal PhaeoP54_01743 c3ef20f3f8cc271620c341637368c2b9 498 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 328 346 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site PhaeoP54_01743 c3ef20f3f8cc271620c341637368c2b9 498 Gene3D G3DSA:2.150.10.10 343 384 4.2E-11 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal PhaeoP54_01743 c3ef20f3f8cc271620c341637368c2b9 498 Gene3D G3DSA:2.150.10.10 385 497 7.8E-26 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal PhaeoP54_01743 c3ef20f3f8cc271620c341637368c2b9 498 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 409 427 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site PhaeoP54_01743 c3ef20f3f8cc271620c341637368c2b9 498 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 319 337 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site PhaeoP54_01743 c3ef20f3f8cc271620c341637368c2b9 498 Gene3D G3DSA:2.150.10.10 87 179 1.5E-7 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal PhaeoP54_01743 c3ef20f3f8cc271620c341637368c2b9 498 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 231 249 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site PhaeoP54_01743 c3ef20f3f8cc271620c341637368c2b9 498 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 340 357 0.22 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_01743 c3ef20f3f8cc271620c341637368c2b9 498 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 359 375 0.0018 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_01743 c3ef20f3f8cc271620c341637368c2b9 498 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 271 287 9.1E-4 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_01743 c3ef20f3f8cc271620c341637368c2b9 498 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 119 128 47.0 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_01743 c3ef20f3f8cc271620c341637368c2b9 498 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 377 393 0.0022 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_01743 c3ef20f3f8cc271620c341637368c2b9 498 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 323 339 0.0014 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_01743 c3ef20f3f8cc271620c341637368c2b9 498 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 235 251 0.26 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_01743 c3ef20f3f8cc271620c341637368c2b9 498 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 216 233 0.027 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_01743 c3ef20f3f8cc271620c341637368c2b9 498 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 304 321 0.0063 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_01743 c3ef20f3f8cc271620c341637368c2b9 498 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 394 411 0.0035 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_01743 c3ef20f3f8cc271620c341637368c2b9 498 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 412 428 0.2 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_01743 c3ef20f3f8cc271620c341637368c2b9 498 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 130 145 0.022 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_01743 c3ef20f3f8cc271620c341637368c2b9 498 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 253 269 2.4 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_02386 130ca741f81c67cffeb59d260e3ca713 344 Gene3D G3DSA:3.40.640.10 12 252 7.2E-117 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PhaeoP54_02386 130ca741f81c67cffeb59d260e3ca713 344 Gene3D G3DSA:3.90.1150.10 5 340 7.2E-117 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 PhaeoP54_02386 130ca741f81c67cffeb59d260e3ca713 344 PIRSF PIRSF038940 1 344 1.6E-128 T 14-10-2018 IPR026273 Low specificity L-threonine aldolase GO:0004793|GO:0006567 KEGG: 00260+4.1.2.48 PhaeoP54_02386 130ca741f81c67cffeb59d260e3ca713 344 SUPERFAMILY SSF53383 1 343 2.87E-93 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PhaeoP54_02386 130ca741f81c67cffeb59d260e3ca713 344 Pfam PF01212 Beta-eliminating lyase 3 290 3.6E-57 T 14-10-2018 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 PhaeoP54_03951 38631b20d96e7cbdb5e4c699218bec88 479 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 277 288 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 PhaeoP54_03951 38631b20d96e7cbdb5e4c699218bec88 479 SUPERFAMILY SSF53720 9 476 5.63E-136 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 PhaeoP54_03951 38631b20d96e7cbdb5e4c699218bec88 479 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 249 256 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 PhaeoP54_03951 38631b20d96e7cbdb5e4c699218bec88 479 Gene3D G3DSA:3.40.605.10 29 471 4.1E-149 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 PhaeoP54_03951 38631b20d96e7cbdb5e4c699218bec88 479 Pfam PF00171 Aldehyde dehydrogenase family 21 475 1.6E-137 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 PhaeoP54_03951 38631b20d96e7cbdb5e4c699218bec88 479 Gene3D G3DSA:3.40.309.10 253 444 4.1E-149 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 PhaeoP54_02930 ea31bbafa1395f5b6af424ae93dc27d0 330 SUPERFAMILY SSF50129 5 144 3.8E-39 T 14-10-2018 IPR011032 GroES-like superfamily PhaeoP54_02930 ea31bbafa1395f5b6af424ae93dc27d0 330 Pfam PF00107 Zinc-binding dehydrogenase 155 267 1.1E-27 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 PhaeoP54_02930 ea31bbafa1395f5b6af424ae93dc27d0 330 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 32 91 7.0E-7 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 PhaeoP54_02930 ea31bbafa1395f5b6af424ae93dc27d0 330 SMART SM00829 14 324 2.5E-44 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 PhaeoP54_02930 ea31bbafa1395f5b6af424ae93dc27d0 330 Gene3D G3DSA:3.40.50.720 124 263 1.1E-103 T 14-10-2018 PhaeoP54_02930 ea31bbafa1395f5b6af424ae93dc27d0 330 TIGRFAM TIGR02824 quinone_pig3: putative NAD(P)H quinone oxidoreductase, PIG3 family 5 326 1.0E-141 T 14-10-2018 IPR014189 Quinone oxidoreductase PIG3 Reactome: R-HSA-6803205 PhaeoP54_02930 ea31bbafa1395f5b6af424ae93dc27d0 330 Gene3D G3DSA:3.90.180.10 18 324 1.1E-103 T 14-10-2018 PhaeoP54_02930 ea31bbafa1395f5b6af424ae93dc27d0 330 SUPERFAMILY SSF51735 115 288 2.3E-49 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PhaeoP54_03271 00fb8926411ec8f520b1aa4f3726fe15 362 Gene3D G3DSA:3.40.50.10990 170 342 5.9E-66 T 14-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 PhaeoP54_03271 00fb8926411ec8f520b1aa4f3726fe15 362 SUPERFAMILY SSF142695 177 340 1.96E-57 T 14-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 PhaeoP54_03271 00fb8926411ec8f520b1aa4f3726fe15 362 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 168 362 37.191 T 14-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 PhaeoP54_03271 00fb8926411ec8f520b1aa4f3726fe15 362 TIGRFAM TIGR00505 ribA: GTP cyclohydrolase II 190 362 2.5E-66 T 14-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 PhaeoP54_03271 00fb8926411ec8f520b1aa4f3726fe15 362 Pfam PF00925 GTP cyclohydrolase II 175 338 2.5E-60 T 14-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 PhaeoP54_01242 563ccb2918a62622da20fbc98b69fd46 178 Pfam PF00196 Bacterial regulatory proteins, luxR family 118 171 1.6E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PhaeoP54_01242 563ccb2918a62622da20fbc98b69fd46 178 SUPERFAMILY SSF55785 5 112 9.95E-14 T 14-10-2018 IPR035965 PAS domain superfamily PhaeoP54_01242 563ccb2918a62622da20fbc98b69fd46 178 SMART SM00421 116 173 1.8E-15 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PhaeoP54_01242 563ccb2918a62622da20fbc98b69fd46 178 SUPERFAMILY SSF46894 111 175 2.04E-16 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PhaeoP54_01242 563ccb2918a62622da20fbc98b69fd46 178 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 5 112 6.3E-9 T 14-10-2018 IPR000014 PAS domain PhaeoP54_01242 563ccb2918a62622da20fbc98b69fd46 178 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 133 149 9.3E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PhaeoP54_01242 563ccb2918a62622da20fbc98b69fd46 178 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 161 9.3E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PhaeoP54_01242 563ccb2918a62622da20fbc98b69fd46 178 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 119 133 9.3E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PhaeoP54_01242 563ccb2918a62622da20fbc98b69fd46 178 Gene3D G3DSA:1.10.10.10 111 174 1.4E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_01242 563ccb2918a62622da20fbc98b69fd46 178 Pfam PF13426 PAS domain 10 111 1.6E-10 T 14-10-2018 IPR000014 PAS domain PhaeoP54_01242 563ccb2918a62622da20fbc98b69fd46 178 ProSitePatterns PS00622 LuxR-type HTH domain signature. 133 160 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PhaeoP54_01242 563ccb2918a62622da20fbc98b69fd46 178 Gene3D G3DSA:3.30.450.20 3 110 2.1E-22 T 14-10-2018 PhaeoP54_00287 ac22814aa45938ae36d9c9e693969c08 345 SMART SM00849 39 257 3.7E-26 T 14-10-2018 IPR001279 Metallo-beta-lactamase PhaeoP54_00287 ac22814aa45938ae36d9c9e693969c08 345 Gene3D G3DSA:3.60.15.10 20 284 2.6E-53 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like PhaeoP54_00287 ac22814aa45938ae36d9c9e693969c08 345 Pfam PF00753 Metallo-beta-lactamase superfamily 37 248 2.3E-25 T 14-10-2018 IPR001279 Metallo-beta-lactamase PhaeoP54_00287 ac22814aa45938ae36d9c9e693969c08 345 SUPERFAMILY SSF56281 8 342 8.8E-79 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like PhaeoP54_00375 8f447e7fdc0552054bb6e1dfe88e7917 357 PRINTS PR00406 Cytochrome B5 reductase signature 116 135 9.3E-9 T 14-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 PhaeoP54_00375 8f447e7fdc0552054bb6e1dfe88e7917 357 PRINTS PR00406 Cytochrome B5 reductase signature 91 105 9.3E-9 T 14-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 PhaeoP54_00375 8f447e7fdc0552054bb6e1dfe88e7917 357 PRINTS PR00406 Cytochrome B5 reductase signature 153 164 9.3E-9 T 14-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 PhaeoP54_00375 8f447e7fdc0552054bb6e1dfe88e7917 357 PRINTS PR00406 Cytochrome B5 reductase signature 212 220 9.3E-9 T 14-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 PhaeoP54_00375 8f447e7fdc0552054bb6e1dfe88e7917 357 Pfam PF00970 Oxidoreductase FAD-binding domain 10 103 2.0E-10 T 14-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 PhaeoP54_00375 8f447e7fdc0552054bb6e1dfe88e7917 357 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 272 346 4.4E-17 T 14-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 PhaeoP54_00375 8f447e7fdc0552054bb6e1dfe88e7917 357 SUPERFAMILY SSF63380 3 105 3.05E-23 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel PhaeoP54_00375 8f447e7fdc0552054bb6e1dfe88e7917 357 Gene3D G3DSA:3.40.50.80 106 249 6.9E-25 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain PhaeoP54_00375 8f447e7fdc0552054bb6e1dfe88e7917 357 Pfam PF00175 Oxidoreductase NAD-binding domain 120 224 1.1E-16 T 14-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 PhaeoP54_00375 8f447e7fdc0552054bb6e1dfe88e7917 357 SUPERFAMILY SSF54292 236 355 4.85E-29 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 PhaeoP54_00375 8f447e7fdc0552054bb6e1dfe88e7917 357 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 304 312 - T 14-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 PhaeoP54_00375 8f447e7fdc0552054bb6e1dfe88e7917 357 Gene3D G3DSA:2.40.30.10 2 104 2.8E-21 T 14-10-2018 PhaeoP54_00375 8f447e7fdc0552054bb6e1dfe88e7917 357 Gene3D G3DSA:3.10.20.30 253 357 1.8E-30 T 14-10-2018 IPR012675 Beta-grasp domain superfamily PhaeoP54_00375 8f447e7fdc0552054bb6e1dfe88e7917 357 SUPERFAMILY SSF52343 95 242 5.89E-31 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain PhaeoP54_03993 396cf0e2aa13aea98435f905b6ac94a5 217 SUPERFAMILY SSF54427 77 214 1.71E-31 T 14-10-2018 IPR032710 NTF2-like domain superfamily PhaeoP54_03993 396cf0e2aa13aea98435f905b6ac94a5 217 Gene3D G3DSA:3.10.450.230 73 217 3.8E-24 T 14-10-2018 PhaeoP54_03993 396cf0e2aa13aea98435f905b6ac94a5 217 Pfam PF04335 VirB8 protein 6 211 1.1E-40 T 14-10-2018 IPR007430 Bacterial virulence protein VirB8 GO:0016020 PhaeoP54_02629 5b0798c8f182b9cc12577a1a46f20f20 465 Pfam PF13416 Bacterial extracellular solute-binding protein 51 372 1.7E-12 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein PhaeoP54_02629 5b0798c8f182b9cc12577a1a46f20f20 465 Gene3D G3DSA:3.40.190.10 35 433 2.8E-33 T 14-10-2018 PhaeoP54_02629 5b0798c8f182b9cc12577a1a46f20f20 465 SUPERFAMILY SSF53850 46 432 1.03E-34 T 14-10-2018 PhaeoP54_00703 a8fd34000167c35bf9fbebca00ef0d4b 699 Pfam PF02065 Melibiase 260 585 3.1E-107 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 PhaeoP54_00703 a8fd34000167c35bf9fbebca00ef0d4b 699 PRINTS PR00743 Glycosyl hydrolase family 36 signature 214 229 3.1E-41 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 PhaeoP54_00703 a8fd34000167c35bf9fbebca00ef0d4b 699 PRINTS PR00743 Glycosyl hydrolase family 36 signature 262 282 3.1E-41 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 PhaeoP54_00703 a8fd34000167c35bf9fbebca00ef0d4b 699 PRINTS PR00743 Glycosyl hydrolase family 36 signature 378 400 3.1E-41 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 PhaeoP54_00703 a8fd34000167c35bf9fbebca00ef0d4b 699 PRINTS PR00743 Glycosyl hydrolase family 36 signature 475 491 3.1E-41 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 PhaeoP54_00703 a8fd34000167c35bf9fbebca00ef0d4b 699 PRINTS PR00743 Glycosyl hydrolase family 36 signature 500 516 3.1E-41 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 PhaeoP54_00703 a8fd34000167c35bf9fbebca00ef0d4b 699 PRINTS PR00743 Glycosyl hydrolase family 36 signature 300 314 3.1E-41 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 PhaeoP54_00703 a8fd34000167c35bf9fbebca00ef0d4b 699 PRINTS PR00743 Glycosyl hydrolase family 36 signature 328 343 3.1E-41 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 PhaeoP54_00703 a8fd34000167c35bf9fbebca00ef0d4b 699 Gene3D G3DSA:3.20.20.70 280 586 2.3E-111 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PhaeoP54_00703 a8fd34000167c35bf9fbebca00ef0d4b 699 PIRSF PIRSF005536 84 680 3.4E-166 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 PhaeoP54_00703 a8fd34000167c35bf9fbebca00ef0d4b 699 SUPERFAMILY SSF51445 297 618 2.73E-95 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily PhaeoP54_00703 a8fd34000167c35bf9fbebca00ef0d4b 699 Pfam PF16874 Glycosyl hydrolase family 36 C-terminal domain 609 686 6.8E-9 T 14-10-2018 IPR031705 Glycosyl hydrolase family 36, C-terminal KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 PhaeoP54_00703 a8fd34000167c35bf9fbebca00ef0d4b 699 Gene3D G3DSA:2.70.98.60 77 278 4.8E-34 T 14-10-2018 IPR038417 Alpha-galactosidase, N-terminal domain superfamily KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 PhaeoP54_00703 a8fd34000167c35bf9fbebca00ef0d4b 699 Pfam PF16875 Glycosyl hydrolase family 36 N-terminal domain 30 247 1.8E-29 T 14-10-2018 IPR031704 Glycosyl hydrolase family 36, N-terminal KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 PhaeoP54_02509 62cdb10628e04bb8e9ee4de17b29bbe5 1112 SUPERFAMILY SSF51120 977 1098 5.55E-15 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal PhaeoP54_02509 62cdb10628e04bb8e9ee4de17b29bbe5 1112 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 485 503 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site PhaeoP54_02509 62cdb10628e04bb8e9ee4de17b29bbe5 1112 SUPERFAMILY SSF55486 47 219 1.7E-30 T 14-10-2018 PhaeoP54_02509 62cdb10628e04bb8e9ee4de17b29bbe5 1112 SUPERFAMILY SSF51120 669 738 1.15E-10 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal PhaeoP54_02509 62cdb10628e04bb8e9ee4de17b29bbe5 1112 SUPERFAMILY SSF51120 761 877 4.45E-6 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal PhaeoP54_02509 62cdb10628e04bb8e9ee4de17b29bbe5 1112 PRINTS PR00313 NodO calcium binding signature 633 642 1.0E-9 T 14-10-2018 PhaeoP54_02509 62cdb10628e04bb8e9ee4de17b29bbe5 1112 PRINTS PR00313 NodO calcium binding signature 624 632 1.0E-9 T 14-10-2018 PhaeoP54_02509 62cdb10628e04bb8e9ee4de17b29bbe5 1112 PRINTS PR00313 NodO calcium binding signature 597 605 1.0E-9 T 14-10-2018 PhaeoP54_02509 62cdb10628e04bb8e9ee4de17b29bbe5 1112 PRINTS PR00313 NodO calcium binding signature 495 506 1.0E-9 T 14-10-2018 PhaeoP54_02509 62cdb10628e04bb8e9ee4de17b29bbe5 1112 SMART SM00235 40 202 0.0072 T 14-10-2018 IPR006026 Peptidase, metallopeptidase GO:0006508|GO:0008237|GO:0008270 PhaeoP54_02509 62cdb10628e04bb8e9ee4de17b29bbe5 1112 Gene3D G3DSA:2.150.10.10 221 410 2.7E-26 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal PhaeoP54_02509 62cdb10628e04bb8e9ee4de17b29bbe5 1112 Pfam PF04151 Bacterial pre-peptidase C-terminal domain 868 938 1.5E-8 T 14-10-2018 IPR007280 Peptidase, C-terminal, archaeal/bacterial PhaeoP54_02509 62cdb10628e04bb8e9ee4de17b29bbe5 1112 SUPERFAMILY SSF51120 421 560 2.22E-15 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal PhaeoP54_02509 62cdb10628e04bb8e9ee4de17b29bbe5 1112 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 494 512 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site PhaeoP54_02509 62cdb10628e04bb8e9ee4de17b29bbe5 1112 Gene3D G3DSA:2.150.10.10 976 1099 1.3E-17 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal PhaeoP54_02509 62cdb10628e04bb8e9ee4de17b29bbe5 1112 Gene3D G3DSA:2.150.10.10 611 646 1.8E-7 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal PhaeoP54_02509 62cdb10628e04bb8e9ee4de17b29bbe5 1112 Gene3D G3DSA:2.150.10.10 461 562 1.9E-18 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal PhaeoP54_02509 62cdb10628e04bb8e9ee4de17b29bbe5 1112 SUPERFAMILY SSF51120 235 395 6.93E-14 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal PhaeoP54_02509 62cdb10628e04bb8e9ee4de17b29bbe5 1112 Gene3D G3DSA:3.40.390.10 47 219 1.1E-23 T 14-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 PhaeoP54_02509 62cdb10628e04bb8e9ee4de17b29bbe5 1112 Gene3D G3DSA:2.150.10.10 647 746 1.6E-15 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal PhaeoP54_02509 62cdb10628e04bb8e9ee4de17b29bbe5 1112 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 712 730 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site PhaeoP54_02509 62cdb10628e04bb8e9ee4de17b29bbe5 1112 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 588 604 43.0 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_02509 62cdb10628e04bb8e9ee4de17b29bbe5 1112 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 516 532 1.5 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_02509 62cdb10628e04bb8e9ee4de17b29bbe5 1112 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 497 514 0.33 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_02509 62cdb10628e04bb8e9ee4de17b29bbe5 1112 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 481 496 0.049 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_02509 62cdb10628e04bb8e9ee4de17b29bbe5 1112 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 323 340 2.3 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_02509 62cdb10628e04bb8e9ee4de17b29bbe5 1112 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 437 453 45.0 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_02509 62cdb10628e04bb8e9ee4de17b29bbe5 1112 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 977 993 0.021 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_02509 62cdb10628e04bb8e9ee4de17b29bbe5 1112 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 623 640 0.2 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_02509 62cdb10628e04bb8e9ee4de17b29bbe5 1112 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 606 622 37.0 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_02509 62cdb10628e04bb8e9ee4de17b29bbe5 1112 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 716 731 0.7 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_02509 62cdb10628e04bb8e9ee4de17b29bbe5 1112 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 995 1010 1.8 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_02509 62cdb10628e04bb8e9ee4de17b29bbe5 1112 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 697 714 0.24 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_02509 62cdb10628e04bb8e9ee4de17b29bbe5 1112 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 781 797 0.13 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_02509 62cdb10628e04bb8e9ee4de17b29bbe5 1112 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 342 357 2.6 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_02509 62cdb10628e04bb8e9ee4de17b29bbe5 1112 SUPERFAMILY SSF51120 558 656 5.89E-15 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal PhaeoP54_02509 62cdb10628e04bb8e9ee4de17b29bbe5 1112 PRINTS PR01488 Gram-negative bacterial RTX toxin determinant A family signature 36 57 1.0E-5 T 14-10-2018 IPR003995 RTX toxin determinant A GO:0005509|GO:0005576|GO:0009405 PhaeoP54_02509 62cdb10628e04bb8e9ee4de17b29bbe5 1112 PRINTS PR01488 Gram-negative bacterial RTX toxin determinant A family signature 489 510 1.0E-5 T 14-10-2018 IPR003995 RTX toxin determinant A GO:0005509|GO:0005576|GO:0009405 PhaeoP54_02509 62cdb10628e04bb8e9ee4de17b29bbe5 1112 Pfam PF08548 Peptidase M10 serralysin C terminal 235 390 6.6E-14 T 14-10-2018 IPR013858 Peptidase M10 serralysin, C-terminal GO:0005509|GO:0005615 PhaeoP54_02509 62cdb10628e04bb8e9ee4de17b29bbe5 1112 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 982 1000 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site PhaeoP54_02509 62cdb10628e04bb8e9ee4de17b29bbe5 1112 Gene3D G3DSA:2.150.10.10 563 610 1.8E-5 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal PhaeoP54_02057 5a24a5e21586060ac008abd3be47ee3f 256 Pfam PF00308 Bacterial dnaA protein 90 188 1.2E-4 T 14-10-2018 IPR013317 Chromosomal replication initiator protein DnaA PhaeoP54_02057 5a24a5e21586060ac008abd3be47ee3f 256 Gene3D G3DSA:3.40.50.300 38 152 2.3E-12 T 14-10-2018 PhaeoP54_02057 5a24a5e21586060ac008abd3be47ee3f 256 SUPERFAMILY SSF52540 17 200 8.49E-11 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_02057 5a24a5e21586060ac008abd3be47ee3f 256 Gene3D G3DSA:1.10.8.60 154 219 4.6E-5 T 14-10-2018 PhaeoP54_00936 b03879f518ae67336683e64375f0e49a 306 SUPERFAMILY SSF56059 102 301 2.6E-43 T 14-10-2018 PhaeoP54_00936 b03879f518ae67336683e64375f0e49a 306 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 242 273 - T 14-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 PhaeoP54_00936 b03879f518ae67336683e64375f0e49a 306 Gene3D G3DSA:3.40.50.20 1 90 1.3E-31 T 14-10-2018 PhaeoP54_00936 b03879f518ae67336683e64375f0e49a 306 SUPERFAMILY SSF52440 10 102 2.97E-32 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily PhaeoP54_00936 b03879f518ae67336683e64375f0e49a 306 Gene3D G3DSA:3.30.470.20 92 298 1.2E-55 T 14-10-2018 PhaeoP54_00936 b03879f518ae67336683e64375f0e49a 306 Pfam PF01820 D-ala D-ala ligase N-terminus 10 90 4.5E-18 T 14-10-2018 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 PhaeoP54_00936 b03879f518ae67336683e64375f0e49a 306 PIRSF PIRSF039102 7 60 1.9E-8 T 14-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 PhaeoP54_00936 b03879f518ae67336683e64375f0e49a 306 PIRSF PIRSF039102 49 305 1.0E-64 T 14-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 PhaeoP54_00936 b03879f518ae67336683e64375f0e49a 306 Pfam PF07478 D-ala D-ala ligase C-terminus 134 300 1.2E-33 T 14-10-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 PhaeoP54_00936 b03879f518ae67336683e64375f0e49a 306 Gene3D G3DSA:3.30.1490.20 117 178 1.2E-55 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 PhaeoP54_00936 b03879f518ae67336683e64375f0e49a 306 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 69 80 - T 14-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 PhaeoP54_00936 b03879f518ae67336683e64375f0e49a 306 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 10 302 4.2E-76 T 14-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 PhaeoP54_00936 b03879f518ae67336683e64375f0e49a 306 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 9 303 31.878 T 14-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 PhaeoP54_02841 194e374b15f59de12d07d9802bb8297e 287 Pfam PF00892 EamA-like transporter family 154 273 5.4E-8 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 PhaeoP54_02841 194e374b15f59de12d07d9802bb8297e 287 Pfam PF00892 EamA-like transporter family 5 137 4.0E-11 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 PhaeoP54_02841 194e374b15f59de12d07d9802bb8297e 287 SUPERFAMILY SSF103481 184 283 2.62E-13 T 14-10-2018 PhaeoP54_02841 194e374b15f59de12d07d9802bb8297e 287 SUPERFAMILY SSF103481 50 141 1.83E-12 T 14-10-2018 PhaeoP54_02097 5aa4b8324fa65f36f5503359b89a6566 428 Gene3D G3DSA:3.20.20.140 70 387 4.8E-164 T 14-10-2018 PhaeoP54_02097 5aa4b8324fa65f36f5503359b89a6566 428 Gene3D G3DSA:2.30.40.10 8 423 4.8E-164 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 PhaeoP54_02097 5aa4b8324fa65f36f5503359b89a6566 428 Pfam PF01979 Amidohydrolase family 67 425 2.1E-52 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 PhaeoP54_02097 5aa4b8324fa65f36f5503359b89a6566 428 SUPERFAMILY SSF51338 27 88 1.91E-13 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 PhaeoP54_02097 5aa4b8324fa65f36f5503359b89a6566 428 TIGRFAM TIGR02967 guan_deamin: guanine deaminase 33 425 1.3E-153 T 14-10-2018 IPR014311 Guanine deaminase GO:0006147|GO:0008270|GO:0008892 KEGG: 00230+3.5.4.3|MetaCyc: PWY-5497|MetaCyc: PWY-6606|MetaCyc: PWY-6608|MetaCyc: PWY-7442|Reactome: R-HSA-74259 PhaeoP54_02097 5aa4b8324fa65f36f5503359b89a6566 428 SUPERFAMILY SSF51556 70 372 8.41E-94 T 14-10-2018 IPR032466 Metal-dependent hydrolase PhaeoP54_03250 a9ffa61b7ba17515a7a7c0077d257c03 815 Pfam PF16350 FAD dependent oxidoreductase central domain 381 435 9.8E-17 T 14-10-2018 IPR032503 FAD dependent oxidoreductase, central domain PhaeoP54_03250 a9ffa61b7ba17515a7a7c0077d257c03 815 Gene3D G3DSA:3.30.1360.120 444 691 1.6E-82 T 14-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 PhaeoP54_03250 a9ffa61b7ba17515a7a7c0077d257c03 815 Gene3D G3DSA:2.40.30.110 723 800 3.7E-19 T 14-10-2018 PhaeoP54_03250 a9ffa61b7ba17515a7a7c0077d257c03 815 SUPERFAMILY SSF51905 8 397 6.47E-60 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PhaeoP54_03250 a9ffa61b7ba17515a7a7c0077d257c03 815 Pfam PF01266 FAD dependent oxidoreductase 9 378 5.1E-55 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 PhaeoP54_03250 a9ffa61b7ba17515a7a7c0077d257c03 815 SUPERFAMILY SSF54373 228 338 3.77E-30 T 14-10-2018 PhaeoP54_03250 a9ffa61b7ba17515a7a7c0077d257c03 815 SUPERFAMILY SSF101790 727 814 6.87E-19 T 14-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal PhaeoP54_03250 a9ffa61b7ba17515a7a7c0077d257c03 815 Gene3D G3DSA:3.30.9.10 89 339 2.7E-135 T 14-10-2018 PhaeoP54_03250 a9ffa61b7ba17515a7a7c0077d257c03 815 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 710 800 5.4E-20 T 14-10-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 PhaeoP54_03250 a9ffa61b7ba17515a7a7c0077d257c03 815 Gene3D G3DSA:3.50.50.60 10 397 2.7E-135 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PhaeoP54_03250 a9ffa61b7ba17515a7a7c0077d257c03 815 Gene3D G3DSA:3.30.70.1400 504 717 1.6E-82 T 14-10-2018 PhaeoP54_03250 a9ffa61b7ba17515a7a7c0077d257c03 815 Pfam PF01571 Aminomethyltransferase folate-binding domain 438 701 1.3E-56 T 14-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain PhaeoP54_03250 a9ffa61b7ba17515a7a7c0077d257c03 815 SUPERFAMILY SSF103025 430 725 2.98E-77 T 14-10-2018 PhaeoP54_03216 554c29511cf3dcb0d83a098e10f2729f 336 Gene3D G3DSA:3.40.50.1980 43 186 2.1E-41 T 14-10-2018 PhaeoP54_03216 554c29511cf3dcb0d83a098e10f2729f 336 Gene3D G3DSA:3.40.50.1980 189 319 2.4E-44 T 14-10-2018 PhaeoP54_03216 554c29511cf3dcb0d83a098e10f2729f 336 PRINTS PR00690 Adhesin family signature 87 104 6.2E-37 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 PhaeoP54_03216 554c29511cf3dcb0d83a098e10f2729f 336 PRINTS PR00690 Adhesin family signature 200 221 6.2E-37 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 PhaeoP54_03216 554c29511cf3dcb0d83a098e10f2729f 336 PRINTS PR00690 Adhesin family signature 253 271 6.2E-37 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 PhaeoP54_03216 554c29511cf3dcb0d83a098e10f2729f 336 PRINTS PR00690 Adhesin family signature 74 87 6.2E-37 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 PhaeoP54_03216 554c29511cf3dcb0d83a098e10f2729f 336 PRINTS PR00690 Adhesin family signature 43 61 6.2E-37 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 PhaeoP54_03216 554c29511cf3dcb0d83a098e10f2729f 336 PRINTS PR00690 Adhesin family signature 284 303 6.2E-37 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 PhaeoP54_03216 554c29511cf3dcb0d83a098e10f2729f 336 Pfam PF01297 Zinc-uptake complex component A periplasmic 46 316 3.2E-69 T 14-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 PhaeoP54_03216 554c29511cf3dcb0d83a098e10f2729f 336 PRINTS PR00691 Adhesin B signature 200 217 1.4E-19 T 14-10-2018 IPR006129 Adhesin B GO:0007155 PhaeoP54_03216 554c29511cf3dcb0d83a098e10f2729f 336 PRINTS PR00691 Adhesin B signature 43 64 1.4E-19 T 14-10-2018 IPR006129 Adhesin B GO:0007155 PhaeoP54_03216 554c29511cf3dcb0d83a098e10f2729f 336 PRINTS PR00691 Adhesin B signature 68 86 1.4E-19 T 14-10-2018 IPR006129 Adhesin B GO:0007155 PhaeoP54_03216 554c29511cf3dcb0d83a098e10f2729f 336 PRINTS PR00691 Adhesin B signature 87 106 1.4E-19 T 14-10-2018 IPR006129 Adhesin B GO:0007155 PhaeoP54_03216 554c29511cf3dcb0d83a098e10f2729f 336 PRINTS PR00691 Adhesin B signature 297 315 1.4E-19 T 14-10-2018 IPR006129 Adhesin B GO:0007155 PhaeoP54_03216 554c29511cf3dcb0d83a098e10f2729f 336 PRINTS PR00691 Adhesin B signature 276 294 1.4E-19 T 14-10-2018 IPR006129 Adhesin B GO:0007155 PhaeoP54_03216 554c29511cf3dcb0d83a098e10f2729f 336 SUPERFAMILY SSF53807 40 319 3.63E-80 T 14-10-2018 PhaeoP54_03426 1388cc0a07f763762a8d6a09e91c4e18 107 Gene3D G3DSA:1.20.120.160 1 101 7.8E-18 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 PhaeoP54_03426 1388cc0a07f763762a8d6a09e91c4e18 107 SUPERFAMILY SSF47226 1 96 1.96E-19 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 PhaeoP54_03426 1388cc0a07f763762a8d6a09e91c4e18 107 Pfam PF01627 Hpt domain 21 84 2.4E-9 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 PhaeoP54_03039 797a53af271494b8fa563f8f31128eb1 391 SUPERFAMILY SSF50447 202 298 1.96E-29 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily PhaeoP54_03039 797a53af271494b8fa563f8f31128eb1 391 PRINTS PR00315 GTP-binding elongation factor signature 73 83 9.2E-25 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PhaeoP54_03039 797a53af271494b8fa563f8f31128eb1 391 PRINTS PR00315 GTP-binding elongation factor signature 53 61 9.2E-25 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PhaeoP54_03039 797a53af271494b8fa563f8f31128eb1 391 PRINTS PR00315 GTP-binding elongation factor signature 126 135 9.2E-25 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PhaeoP54_03039 797a53af271494b8fa563f8f31128eb1 391 PRINTS PR00315 GTP-binding elongation factor signature 89 100 9.2E-25 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PhaeoP54_03039 797a53af271494b8fa563f8f31128eb1 391 PRINTS PR00315 GTP-binding elongation factor signature 14 27 9.2E-25 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PhaeoP54_03039 797a53af271494b8fa563f8f31128eb1 391 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 391 59.253 T 14-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 PhaeoP54_03039 797a53af271494b8fa563f8f31128eb1 391 Gene3D G3DSA:2.40.30.10 203 331 1.7E-51 T 14-10-2018 PhaeoP54_03039 797a53af271494b8fa563f8f31128eb1 391 Pfam PF03143 Elongation factor Tu C-terminal domain 295 389 4.1E-33 T 14-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal PhaeoP54_03039 797a53af271494b8fa563f8f31128eb1 391 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 46 61 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site PhaeoP54_03039 797a53af271494b8fa563f8f31128eb1 391 Gene3D G3DSA:2.40.30.10 335 390 2.0E-28 T 14-10-2018 PhaeoP54_03039 797a53af271494b8fa563f8f31128eb1 391 Pfam PF03144 Elongation factor Tu domain 2 222 291 2.3E-15 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 PhaeoP54_03039 797a53af271494b8fa563f8f31128eb1 391 SUPERFAMILY SSF50465 295 390 1.24E-35 T 14-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal PhaeoP54_03039 797a53af271494b8fa563f8f31128eb1 391 Pfam PF00009 Elongation factor Tu GTP binding domain 10 198 8.1E-57 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PhaeoP54_03039 797a53af271494b8fa563f8f31128eb1 391 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 390 4.3E-222 T 14-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 PhaeoP54_03039 797a53af271494b8fa563f8f31128eb1 391 Gene3D G3DSA:3.40.50.300 1 200 1.9E-68 T 14-10-2018 PhaeoP54_03039 797a53af271494b8fa563f8f31128eb1 391 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 143 6.2E-15 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 PhaeoP54_03039 797a53af271494b8fa563f8f31128eb1 391 SUPERFAMILY SSF52540 6 216 1.69E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_03064 797a53af271494b8fa563f8f31128eb1 391 SUPERFAMILY SSF50447 202 298 1.96E-29 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily PhaeoP54_03064 797a53af271494b8fa563f8f31128eb1 391 PRINTS PR00315 GTP-binding elongation factor signature 73 83 9.2E-25 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PhaeoP54_03064 797a53af271494b8fa563f8f31128eb1 391 PRINTS PR00315 GTP-binding elongation factor signature 53 61 9.2E-25 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PhaeoP54_03064 797a53af271494b8fa563f8f31128eb1 391 PRINTS PR00315 GTP-binding elongation factor signature 126 135 9.2E-25 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PhaeoP54_03064 797a53af271494b8fa563f8f31128eb1 391 PRINTS PR00315 GTP-binding elongation factor signature 89 100 9.2E-25 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PhaeoP54_03064 797a53af271494b8fa563f8f31128eb1 391 PRINTS PR00315 GTP-binding elongation factor signature 14 27 9.2E-25 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PhaeoP54_03064 797a53af271494b8fa563f8f31128eb1 391 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 391 59.253 T 14-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 PhaeoP54_03064 797a53af271494b8fa563f8f31128eb1 391 Gene3D G3DSA:2.40.30.10 203 331 1.7E-51 T 14-10-2018 PhaeoP54_03064 797a53af271494b8fa563f8f31128eb1 391 Pfam PF03143 Elongation factor Tu C-terminal domain 295 389 4.1E-33 T 14-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal PhaeoP54_03064 797a53af271494b8fa563f8f31128eb1 391 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 46 61 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site PhaeoP54_03064 797a53af271494b8fa563f8f31128eb1 391 Gene3D G3DSA:2.40.30.10 335 390 2.0E-28 T 14-10-2018 PhaeoP54_03064 797a53af271494b8fa563f8f31128eb1 391 Pfam PF03144 Elongation factor Tu domain 2 222 291 2.3E-15 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 PhaeoP54_03064 797a53af271494b8fa563f8f31128eb1 391 SUPERFAMILY SSF50465 295 390 1.24E-35 T 14-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal PhaeoP54_03064 797a53af271494b8fa563f8f31128eb1 391 Pfam PF00009 Elongation factor Tu GTP binding domain 10 198 8.1E-57 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PhaeoP54_03064 797a53af271494b8fa563f8f31128eb1 391 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 390 4.3E-222 T 14-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 PhaeoP54_03064 797a53af271494b8fa563f8f31128eb1 391 Gene3D G3DSA:3.40.50.300 1 200 1.9E-68 T 14-10-2018 PhaeoP54_03064 797a53af271494b8fa563f8f31128eb1 391 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 143 6.2E-15 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 PhaeoP54_03064 797a53af271494b8fa563f8f31128eb1 391 SUPERFAMILY SSF52540 6 216 1.69E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_02409 7c8cf3b419431cd4b4d6a3f7082f1964 361 Pfam PF00155 Aminotransferase class I and II 28 352 9.5E-50 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 PhaeoP54_02409 7c8cf3b419431cd4b4d6a3f7082f1964 361 Gene3D G3DSA:3.90.1150.10 24 351 3.1E-102 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 PhaeoP54_02409 7c8cf3b419431cd4b4d6a3f7082f1964 361 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 5 357 54.999 T 14-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 PhaeoP54_02409 7c8cf3b419431cd4b4d6a3f7082f1964 361 SUPERFAMILY SSF53383 19 355 3.4E-79 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PhaeoP54_02409 7c8cf3b419431cd4b4d6a3f7082f1964 361 Gene3D G3DSA:3.40.640.10 41 263 3.1E-102 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PhaeoP54_02409 7c8cf3b419431cd4b4d6a3f7082f1964 361 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 9 354 4.3E-93 T 14-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 PhaeoP54_01800 f769eae88b9ac584c6b4c973b28570c8 652 ProSitePatterns PS00786 5'-nucleotidase signature 2. 120 131 - T 14-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 PhaeoP54_01800 f769eae88b9ac584c6b4c973b28570c8 652 SUPERFAMILY SSF55816 375 609 7.19E-43 T 14-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 PhaeoP54_01800 f769eae88b9ac584c6b4c973b28570c8 652 SUPERFAMILY SSF56300 28 372 5.22E-86 T 14-10-2018 PhaeoP54_01800 f769eae88b9ac584c6b4c973b28570c8 652 Pfam PF02872 5'-nucleotidase, C-terminal domain 437 568 4.7E-22 T 14-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 PhaeoP54_01800 f769eae88b9ac584c6b4c973b28570c8 652 PRINTS PR01607 Apyrase family signature 545 564 1.2E-27 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 PhaeoP54_01800 f769eae88b9ac584c6b4c973b28570c8 652 PRINTS PR01607 Apyrase family signature 299 319 1.2E-27 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 PhaeoP54_01800 f769eae88b9ac584c6b4c973b28570c8 652 PRINTS PR01607 Apyrase family signature 32 50 1.2E-27 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 PhaeoP54_01800 f769eae88b9ac584c6b4c973b28570c8 652 PRINTS PR01607 Apyrase family signature 231 248 1.2E-27 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 PhaeoP54_01800 f769eae88b9ac584c6b4c973b28570c8 652 PRINTS PR01607 Apyrase family signature 445 468 1.2E-27 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 PhaeoP54_01800 f769eae88b9ac584c6b4c973b28570c8 652 PRINTS PR01607 Apyrase family signature 259 282 1.2E-27 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 PhaeoP54_01800 f769eae88b9ac584c6b4c973b28570c8 652 Gene3D G3DSA:3.60.21.10 25 373 7.3E-124 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like PhaeoP54_01800 f769eae88b9ac584c6b4c973b28570c8 652 Pfam PF00149 Calcineurin-like phosphoesterase 35 275 1.5E-8 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 PhaeoP54_01800 f769eae88b9ac584c6b4c973b28570c8 652 Gene3D G3DSA:3.90.780.10 422 608 5.2E-56 T 14-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 PhaeoP54_02061 61e8b4c3af8266ed49fbfab9667370c5 232 Gene3D G3DSA:1.10.287.110 147 223 9.4E-10 T 14-10-2018 IPR036869 Chaperone J-domain superfamily PhaeoP54_02061 61e8b4c3af8266ed49fbfab9667370c5 232 SUPERFAMILY SSF158682 25 175 1.44E-29 T 14-10-2018 IPR029024 TerB-like PhaeoP54_02061 61e8b4c3af8266ed49fbfab9667370c5 232 Pfam PF05099 Tellurite resistance protein TerB 17 153 7.0E-37 T 14-10-2018 IPR007791 Co-chaperone DjlA, N-terminal PhaeoP54_02061 61e8b4c3af8266ed49fbfab9667370c5 232 SUPERFAMILY SSF46565 161 221 1.08E-10 T 14-10-2018 IPR036869 Chaperone J-domain superfamily PhaeoP54_02061 61e8b4c3af8266ed49fbfab9667370c5 232 Gene3D G3DSA:1.10.3680.10 3 146 8.6E-18 T 14-10-2018 IPR029024 TerB-like PhaeoP54_02061 61e8b4c3af8266ed49fbfab9667370c5 232 SMART SM00271 161 230 1.2E-5 T 14-10-2018 IPR001623 DnaJ domain PhaeoP54_02061 61e8b4c3af8266ed49fbfab9667370c5 232 Pfam PF00226 DnaJ domain 162 219 3.3E-7 T 14-10-2018 IPR001623 DnaJ domain PhaeoP54_03044 36c5b8c4ee380e9e034aa018c53cc6f3 300 SUPERFAMILY SSF103481 63 147 2.22E-10 T 14-10-2018 PhaeoP54_03044 36c5b8c4ee380e9e034aa018c53cc6f3 300 Pfam PF00892 EamA-like transporter family 155 280 1.0E-7 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 PhaeoP54_03044 36c5b8c4ee380e9e034aa018c53cc6f3 300 Pfam PF00892 EamA-like transporter family 10 143 1.3E-8 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 PhaeoP54_03044 36c5b8c4ee380e9e034aa018c53cc6f3 300 SUPERFAMILY SSF103481 191 288 1.83E-10 T 14-10-2018 PhaeoP54_01814 7c50f0bd7d10e2c94f2f79ae7e29205e 434 Pfam PF10397 Adenylosuccinate lyase C-terminus 353 431 9.7E-26 T 14-10-2018 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 PhaeoP54_01814 7c50f0bd7d10e2c94f2f79ae7e29205e 434 Gene3D G3DSA:1.10.275.10 1 95 8.2E-32 T 14-10-2018 IPR024083 Fumarase/histidase, N-terminal PhaeoP54_01814 7c50f0bd7d10e2c94f2f79ae7e29205e 434 PRINTS PR00149 Fumarate lyase superfamily signature 136 154 5.0E-25 T 14-10-2018 IPR000362 Fumarate lyase family PhaeoP54_01814 7c50f0bd7d10e2c94f2f79ae7e29205e 434 PRINTS PR00149 Fumarate lyase superfamily signature 264 280 5.0E-25 T 14-10-2018 IPR000362 Fumarate lyase family PhaeoP54_01814 7c50f0bd7d10e2c94f2f79ae7e29205e 434 PRINTS PR00149 Fumarate lyase superfamily signature 219 246 5.0E-25 T 14-10-2018 IPR000362 Fumarate lyase family PhaeoP54_01814 7c50f0bd7d10e2c94f2f79ae7e29205e 434 PRINTS PR00149 Fumarate lyase superfamily signature 91 109 5.0E-25 T 14-10-2018 IPR000362 Fumarate lyase family PhaeoP54_01814 7c50f0bd7d10e2c94f2f79ae7e29205e 434 Gene3D G3DSA:1.10.40.30 352 433 3.0E-28 T 14-10-2018 PhaeoP54_01814 7c50f0bd7d10e2c94f2f79ae7e29205e 434 SUPERFAMILY SSF48557 3 432 1.3E-129 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 PhaeoP54_01814 7c50f0bd7d10e2c94f2f79ae7e29205e 434 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 1 432 2.1E-151 T 14-10-2018 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 PhaeoP54_01814 7c50f0bd7d10e2c94f2f79ae7e29205e 434 SMART SM00998 352 432 1.1E-37 T 14-10-2018 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 PhaeoP54_01814 7c50f0bd7d10e2c94f2f79ae7e29205e 434 PRINTS PR00145 Argininosuccinate lyase family signature 264 280 1.1E-5 T 14-10-2018 PhaeoP54_01814 7c50f0bd7d10e2c94f2f79ae7e29205e 434 PRINTS PR00145 Argininosuccinate lyase family signature 131 151 1.1E-5 T 14-10-2018 PhaeoP54_01814 7c50f0bd7d10e2c94f2f79ae7e29205e 434 PRINTS PR00145 Argininosuccinate lyase family signature 219 243 1.1E-5 T 14-10-2018 PhaeoP54_01814 7c50f0bd7d10e2c94f2f79ae7e29205e 434 ProSitePatterns PS00163 Fumarate lyases signature. 264 273 - T 14-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 PhaeoP54_01814 7c50f0bd7d10e2c94f2f79ae7e29205e 434 Pfam PF00206 Lyase 7 287 7.4E-55 T 14-10-2018 IPR022761 Fumarate lyase, N-terminal PhaeoP54_01814 7c50f0bd7d10e2c94f2f79ae7e29205e 434 Gene3D G3DSA:1.20.200.10 96 350 2.1E-85 T 14-10-2018 PhaeoP54_01177 c28998498b15638de2a9dbd328737474 210 Pfam PF14681 Uracil phosphoribosyltransferase 7 209 5.2E-71 T 14-10-2018 PhaeoP54_01177 c28998498b15638de2a9dbd328737474 210 Gene3D G3DSA:3.40.50.2020 4 210 2.9E-76 T 14-10-2018 PhaeoP54_01177 c28998498b15638de2a9dbd328737474 210 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 5 210 1.3E-82 T 14-10-2018 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 PhaeoP54_01177 c28998498b15638de2a9dbd328737474 210 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 4 210 45.104 T 14-10-2018 IPR034332 Uracil phosphoribosyltransferase, bacterial-type KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 PhaeoP54_01177 c28998498b15638de2a9dbd328737474 210 SUPERFAMILY SSF53271 5 208 5.11E-69 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like PhaeoP54_02191 a86c8a5df22e4a3a9e01b261d54683b1 278 Gene3D G3DSA:1.10.10.10 1 61 6.7E-8 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_02191 a86c8a5df22e4a3a9e01b261d54683b1 278 Pfam PF08220 DeoR-like helix-turn-helix domain 9 65 1.8E-11 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 PhaeoP54_02191 a86c8a5df22e4a3a9e01b261d54683b1 278 Pfam PF00455 DeoR C terminal sensor domain 78 236 5.4E-44 T 14-10-2018 IPR014036 DeoR C-terminal sensor domain PhaeoP54_02191 a86c8a5df22e4a3a9e01b261d54683b1 278 SMART SM01134 76 237 1.6E-58 T 14-10-2018 PhaeoP54_02191 a86c8a5df22e4a3a9e01b261d54683b1 278 SUPERFAMILY SSF100950 78 237 4.57E-27 T 14-10-2018 IPR037171 NagB/RpiA transferase-like PhaeoP54_02191 a86c8a5df22e4a3a9e01b261d54683b1 278 SUPERFAMILY SSF46785 7 64 1.48E-8 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_02191 a86c8a5df22e4a3a9e01b261d54683b1 278 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 28 42 7.5E-6 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 PhaeoP54_02191 a86c8a5df22e4a3a9e01b261d54683b1 278 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 42 60 7.5E-6 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 PhaeoP54_02191 a86c8a5df22e4a3a9e01b261d54683b1 278 SMART SM00420 9 62 1.5E-5 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 PhaeoP54_02281 85b258eef903981396077bcc063b7522 187 ProSitePatterns PS01275 Elongation factor P signature. 152 171 - T 14-10-2018 IPR013852 Translation elongation factor P/YeiP, conserved site PhaeoP54_02281 85b258eef903981396077bcc063b7522 187 Pfam PF01132 Elongation factor P (EF-P) OB domain 70 122 1.6E-20 T 14-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 PhaeoP54_02281 85b258eef903981396077bcc063b7522 187 Gene3D G3DSA:2.40.50.140 67 128 2.2E-19 T 14-10-2018 PhaeoP54_02281 85b258eef903981396077bcc063b7522 187 Pfam PF09285 Elongation factor P, C-terminal 131 186 1.4E-22 T 14-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 PhaeoP54_02281 85b258eef903981396077bcc063b7522 187 SUPERFAMILY SSF50104 4 65 9.63E-19 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily PhaeoP54_02281 85b258eef903981396077bcc063b7522 187 Gene3D G3DSA:2.40.50.140 131 187 3.0E-22 T 14-10-2018 PhaeoP54_02281 85b258eef903981396077bcc063b7522 187 SUPERFAMILY SSF50249 67 131 1.1E-17 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold PhaeoP54_02281 85b258eef903981396077bcc063b7522 187 Hamap MF_00141 Elongation factor P [efp]. 3 187 44.5 T 14-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 PhaeoP54_02281 85b258eef903981396077bcc063b7522 187 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 6 62 2.9E-23 T 14-10-2018 IPR013185 Translation elongation factor, KOW-like PhaeoP54_02281 85b258eef903981396077bcc063b7522 187 SMART SM00841 131 186 8.5E-29 T 14-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 PhaeoP54_02281 85b258eef903981396077bcc063b7522 187 PIRSF PIRSF005901 2 187 1.2E-69 T 14-10-2018 IPR020599 Translation elongation factor P/YeiP PhaeoP54_02281 85b258eef903981396077bcc063b7522 187 Gene3D G3DSA:2.30.30.30 1 64 2.6E-23 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 PhaeoP54_02281 85b258eef903981396077bcc063b7522 187 SMART SM01185 69 123 1.9E-22 T 14-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 PhaeoP54_02281 85b258eef903981396077bcc063b7522 187 SUPERFAMILY SSF50249 131 187 4.28E-17 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold PhaeoP54_02281 85b258eef903981396077bcc063b7522 187 TIGRFAM TIGR00038 efp: translation elongation factor P 4 187 1.6E-71 T 14-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 PhaeoP54_00876 3f03f3e9916099228afa89a1cb985ead 255 Gene3D G3DSA:3.20.20.70 1 255 3.9E-104 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PhaeoP54_00876 3f03f3e9916099228afa89a1cb985ead 255 Pfam PF05690 Thiazole biosynthesis protein ThiG 3 247 8.2E-106 T 14-10-2018 IPR033983 Thiazole synthase ThiG KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 PhaeoP54_00876 3f03f3e9916099228afa89a1cb985ead 255 SUPERFAMILY SSF110399 2 239 3.53E-81 T 14-10-2018 PhaeoP54_00876 3f03f3e9916099228afa89a1cb985ead 255 Hamap MF_00443 Thiazole synthase [thiG]. 1 253 39.237 T 14-10-2018 IPR008867 Thiazole synthase GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 PhaeoP54_00115 87e0368aad8ca028dc559e1c735a7b8b 464 Gene3D G3DSA:3.40.630.10 140 462 7.0E-115 T 14-10-2018 PhaeoP54_00115 87e0368aad8ca028dc559e1c735a7b8b 464 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 312 319 - T 14-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 PhaeoP54_00115 87e0368aad8ca028dc559e1c735a7b8b 464 SUPERFAMILY SSF52949 8 131 2.3E-6 T 14-10-2018 PhaeoP54_00115 87e0368aad8ca028dc559e1c735a7b8b 464 SUPERFAMILY SSF53187 148 461 9.1E-104 T 14-10-2018 PhaeoP54_00115 87e0368aad8ca028dc559e1c735a7b8b 464 PRINTS PR00481 Cytosol aminopeptidase signature 249 270 6.0E-47 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 PhaeoP54_00115 87e0368aad8ca028dc559e1c735a7b8b 464 PRINTS PR00481 Cytosol aminopeptidase signature 336 351 6.0E-47 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 PhaeoP54_00115 87e0368aad8ca028dc559e1c735a7b8b 464 PRINTS PR00481 Cytosol aminopeptidase signature 308 328 6.0E-47 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 PhaeoP54_00115 87e0368aad8ca028dc559e1c735a7b8b 464 PRINTS PR00481 Cytosol aminopeptidase signature 227 244 6.0E-47 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 PhaeoP54_00115 87e0368aad8ca028dc559e1c735a7b8b 464 PRINTS PR00481 Cytosol aminopeptidase signature 286 307 6.0E-47 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 PhaeoP54_00115 87e0368aad8ca028dc559e1c735a7b8b 464 Gene3D G3DSA:3.40.220.10 8 137 2.6E-27 T 14-10-2018 PhaeoP54_00115 87e0368aad8ca028dc559e1c735a7b8b 464 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 154 437 4.0E-102 T 14-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 PhaeoP54_03277 e1bc0c30ec2515bdc308c97d2ba173d0 180 Pfam PF04390 Lipopolysaccharide-assembly 52 160 2.7E-5 T 14-10-2018 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 PhaeoP54_03277 e1bc0c30ec2515bdc308c97d2ba173d0 180 Gene3D G3DSA:3.30.160.150 38 167 2.7E-24 T 14-10-2018 PhaeoP54_00740 e2b76fbc716d3fd0bc7bf411269794af 435 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 1 420 31.997 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 PhaeoP54_00740 e2b76fbc716d3fd0bc7bf411269794af 435 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 24 419 5.5E-133 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 PhaeoP54_00740 e2b76fbc716d3fd0bc7bf411269794af 435 Gene3D G3DSA:3.40.50.1980 21 222 2.4E-96 T 14-10-2018 PhaeoP54_00740 e2b76fbc716d3fd0bc7bf411269794af 435 Pfam PF00815 Histidinol dehydrogenase 13 420 1.5E-134 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 PhaeoP54_00740 e2b76fbc716d3fd0bc7bf411269794af 435 PRINTS PR00083 Histidinol dehydrogenase signature 98 125 1.9E-65 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 PhaeoP54_00740 e2b76fbc716d3fd0bc7bf411269794af 435 PRINTS PR00083 Histidinol dehydrogenase signature 242 261 1.9E-65 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 PhaeoP54_00740 e2b76fbc716d3fd0bc7bf411269794af 435 PRINTS PR00083 Histidinol dehydrogenase signature 313 338 1.9E-65 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 PhaeoP54_00740 e2b76fbc716d3fd0bc7bf411269794af 435 PRINTS PR00083 Histidinol dehydrogenase signature 220 241 1.9E-65 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 PhaeoP54_00740 e2b76fbc716d3fd0bc7bf411269794af 435 PRINTS PR00083 Histidinol dehydrogenase signature 24 48 1.9E-65 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 PhaeoP54_00740 e2b76fbc716d3fd0bc7bf411269794af 435 PRINTS PR00083 Histidinol dehydrogenase signature 161 187 1.9E-65 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 PhaeoP54_00740 e2b76fbc716d3fd0bc7bf411269794af 435 PRINTS PR00083 Histidinol dehydrogenase signature 191 216 1.9E-65 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 PhaeoP54_00740 e2b76fbc716d3fd0bc7bf411269794af 435 PRINTS PR00083 Histidinol dehydrogenase signature 354 372 1.9E-65 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 PhaeoP54_00740 e2b76fbc716d3fd0bc7bf411269794af 435 Gene3D G3DSA:3.40.50.1980 224 342 2.4E-96 T 14-10-2018 PhaeoP54_00740 e2b76fbc716d3fd0bc7bf411269794af 435 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 220 252 - T 14-10-2018 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23 PhaeoP54_00740 e2b76fbc716d3fd0bc7bf411269794af 435 PIRSF PIRSF000099 2 423 3.8E-119 T 14-10-2018 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 PhaeoP54_00740 e2b76fbc716d3fd0bc7bf411269794af 435 SUPERFAMILY SSF53720 18 420 3.53E-65 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 PhaeoP54_03170 27496c56fd63591b774a6490652006eb 304 SUPERFAMILY SSF46785 10 94 1.87E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_03170 27496c56fd63591b774a6490652006eb 304 Gene3D G3DSA:1.10.10.10 9 97 3.9E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_03170 27496c56fd63591b774a6490652006eb 304 Pfam PF03466 LysR substrate binding domain 97 299 9.6E-16 T 14-10-2018 IPR005119 LysR, substrate-binding PhaeoP54_03170 27496c56fd63591b774a6490652006eb 304 Gene3D G3DSA:3.40.190.290 99 210 1.0E-9 T 14-10-2018 PhaeoP54_03170 27496c56fd63591b774a6490652006eb 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 69 9.9E-14 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PhaeoP54_03170 27496c56fd63591b774a6490652006eb 304 SUPERFAMILY SSF53850 99 301 7.06E-18 T 14-10-2018 PhaeoP54_03834 12aac29eecaceb075199229b8db26bd2 476 TIGRFAM TIGR02053 MerA: mercury(II) reductase 14 476 6.5E-152 T 14-10-2018 IPR021179 Mercury(II) reductase GO:0016152|GO:0016491|GO:0045340|GO:0050660|GO:0050661|GO:0050787|GO:0055114 PhaeoP54_03834 12aac29eecaceb075199229b8db26bd2 476 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 48 58 - T 14-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 PhaeoP54_03834 12aac29eecaceb075199229b8db26bd2 476 Gene3D G3DSA:3.50.50.60 17 330 5.5E-94 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PhaeoP54_03834 12aac29eecaceb075199229b8db26bd2 476 Gene3D G3DSA:3.30.390.30 351 476 6.0E-42 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 PhaeoP54_03834 12aac29eecaceb075199229b8db26bd2 476 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 352 460 3.3E-28 T 14-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 PhaeoP54_03834 12aac29eecaceb075199229b8db26bd2 476 Gene3D G3DSA:3.50.50.60 155 275 5.5E-94 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PhaeoP54_03834 12aac29eecaceb075199229b8db26bd2 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 47 62 1.3E-58 T 14-10-2018 PhaeoP54_03834 12aac29eecaceb075199229b8db26bd2 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 182 207 1.3E-58 T 14-10-2018 PhaeoP54_03834 12aac29eecaceb075199229b8db26bd2 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 312 319 1.3E-58 T 14-10-2018 PhaeoP54_03834 12aac29eecaceb075199229b8db26bd2 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 269 283 1.3E-58 T 14-10-2018 PhaeoP54_03834 12aac29eecaceb075199229b8db26bd2 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 348 369 1.3E-58 T 14-10-2018 PhaeoP54_03834 12aac29eecaceb075199229b8db26bd2 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 15 37 1.3E-58 T 14-10-2018 PhaeoP54_03834 12aac29eecaceb075199229b8db26bd2 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 146 155 1.3E-58 T 14-10-2018 PhaeoP54_03834 12aac29eecaceb075199229b8db26bd2 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 413 428 1.3E-58 T 14-10-2018 PhaeoP54_03834 12aac29eecaceb075199229b8db26bd2 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 435 455 1.3E-58 T 14-10-2018 PhaeoP54_03834 12aac29eecaceb075199229b8db26bd2 476 SUPERFAMILY SSF55424 351 473 1.2E-32 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 PhaeoP54_03834 12aac29eecaceb075199229b8db26bd2 476 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 182 200 1.2E-27 T 14-10-2018 PhaeoP54_03834 12aac29eecaceb075199229b8db26bd2 476 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 297 319 1.2E-27 T 14-10-2018 PhaeoP54_03834 12aac29eecaceb075199229b8db26bd2 476 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 143 161 1.2E-27 T 14-10-2018 PhaeoP54_03834 12aac29eecaceb075199229b8db26bd2 476 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 16 35 1.2E-27 T 14-10-2018 PhaeoP54_03834 12aac29eecaceb075199229b8db26bd2 476 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 268 284 1.2E-27 T 14-10-2018 PhaeoP54_03834 12aac29eecaceb075199229b8db26bd2 476 PIRSF PIRSF000350 1 476 5.3E-157 T 14-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 PhaeoP54_03834 12aac29eecaceb075199229b8db26bd2 476 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 14 332 2.9E-58 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PhaeoP54_03834 12aac29eecaceb075199229b8db26bd2 476 SUPERFAMILY SSF51905 14 385 1.52E-50 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PhaeoP54_03767 31de4026a19d5f5262a1d40889853209 489 Pfam PF00392 Bacterial regulatory proteins, gntR family 24 86 2.0E-14 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PhaeoP54_03767 31de4026a19d5f5262a1d40889853209 489 SUPERFAMILY SSF46785 17 87 4.62E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_03767 31de4026a19d5f5262a1d40889853209 489 Pfam PF00155 Aminotransferase class I and II 166 481 6.9E-19 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 PhaeoP54_03767 31de4026a19d5f5262a1d40889853209 489 Gene3D G3DSA:3.40.640.10 119 482 1.9E-105 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PhaeoP54_03767 31de4026a19d5f5262a1d40889853209 489 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 46 60 4.9E-7 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PhaeoP54_03767 31de4026a19d5f5262a1d40889853209 489 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 60 76 4.9E-7 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PhaeoP54_03767 31de4026a19d5f5262a1d40889853209 489 SMART SM00345 27 86 1.2E-13 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PhaeoP54_03767 31de4026a19d5f5262a1d40889853209 489 Gene3D G3DSA:1.10.10.10 22 117 3.1E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_03767 31de4026a19d5f5262a1d40889853209 489 SUPERFAMILY SSF53383 122 488 5.61E-82 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PhaeoP54_04080 9d1739362a095852763fffe7464ec509 771 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 585 603 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site PhaeoP54_04080 9d1739362a095852763fffe7464ec509 771 Gene3D G3DSA:2.150.10.10 439 482 1.1E-10 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal PhaeoP54_04080 9d1739362a095852763fffe7464ec509 771 SUPERFAMILY SSF51120 403 531 1.67E-26 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal PhaeoP54_04080 9d1739362a095852763fffe7464ec509 771 Gene3D G3DSA:2.150.10.10 270 310 2.2E-6 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal PhaeoP54_04080 9d1739362a095852763fffe7464ec509 771 PRINTS PR00313 NodO calcium binding signature 237 245 1.3E-7 T 14-10-2018 PhaeoP54_04080 9d1739362a095852763fffe7464ec509 771 PRINTS PR00313 NodO calcium binding signature 143 154 1.3E-7 T 14-10-2018 PhaeoP54_04080 9d1739362a095852763fffe7464ec509 771 PRINTS PR00313 NodO calcium binding signature 279 287 1.3E-7 T 14-10-2018 PhaeoP54_04080 9d1739362a095852763fffe7464ec509 771 PRINTS PR00313 NodO calcium binding signature 306 315 1.3E-7 T 14-10-2018 PhaeoP54_04080 9d1739362a095852763fffe7464ec509 771 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 589 605 0.01 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_04080 9d1739362a095852763fffe7464ec509 771 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 618 634 0.76 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_04080 9d1739362a095852763fffe7464ec509 771 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 498 514 0.007 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_04080 9d1739362a095852763fffe7464ec509 771 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 94 108 1.2 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_04080 9d1739362a095852763fffe7464ec509 771 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 228 242 0.56 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_04080 9d1739362a095852763fffe7464ec509 771 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 203 216 0.21 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_04080 9d1739362a095852763fffe7464ec509 771 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 288 303 0.36 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_04080 9d1739362a095852763fffe7464ec509 771 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 165 178 7.5 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_04080 9d1739362a095852763fffe7464ec509 771 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 112 126 2.2 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_04080 9d1739362a095852763fffe7464ec509 771 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 435 452 0.0011 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_04080 9d1739362a095852763fffe7464ec509 771 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 462 479 0.009 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_04080 9d1739362a095852763fffe7464ec509 771 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 552 569 1.8 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_04080 9d1739362a095852763fffe7464ec509 771 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 399 416 8.4E-4 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_04080 9d1739362a095852763fffe7464ec509 771 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 323 340 0.074 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_04080 9d1739362a095852763fffe7464ec509 771 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 128 144 2.0 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_04080 9d1739362a095852763fffe7464ec509 771 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 417 432 0.25 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_04080 9d1739362a095852763fffe7464ec509 771 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 145 158 3.8 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_04080 9d1739362a095852763fffe7464ec509 771 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 58 73 9.4 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_04080 9d1739362a095852763fffe7464ec509 771 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 272 286 1.5 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_04080 9d1739362a095852763fffe7464ec509 771 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 570 587 0.02 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_04080 9d1739362a095852763fffe7464ec509 771 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 480 497 0.078 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_04080 9d1739362a095852763fffe7464ec509 771 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 76 92 0.98 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_04080 9d1739362a095852763fffe7464ec509 771 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 306 321 2.2 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_04080 9d1739362a095852763fffe7464ec509 771 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 516 533 0.044 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_04080 9d1739362a095852763fffe7464ec509 771 Gene3D G3DSA:2.150.10.10 583 723 1.3E-17 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal PhaeoP54_04080 9d1739362a095852763fffe7464ec509 771 Gene3D G3DSA:2.150.10.10 483 536 1.5E-13 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal PhaeoP54_04080 9d1739362a095852763fffe7464ec509 771 Gene3D G3DSA:2.150.10.10 36 110 1.7E-10 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal PhaeoP54_04080 9d1739362a095852763fffe7464ec509 771 Gene3D G3DSA:2.150.10.10 396 438 4.9E-10 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal PhaeoP54_04080 9d1739362a095852763fffe7464ec509 771 Gene3D G3DSA:2.150.10.10 111 168 3.6E-7 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal PhaeoP54_04080 9d1739362a095852763fffe7464ec509 771 Gene3D G3DSA:2.150.10.10 201 267 2.2E-7 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal PhaeoP54_04080 9d1739362a095852763fffe7464ec509 771 SUPERFAMILY SSF51120 255 374 2.49E-14 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal PhaeoP54_04080 9d1739362a095852763fffe7464ec509 771 SUPERFAMILY SSF51120 517 714 1.94E-20 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal PhaeoP54_04080 9d1739362a095852763fffe7464ec509 771 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 124 142 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site PhaeoP54_04080 9d1739362a095852763fffe7464ec509 771 Gene3D G3DSA:2.150.10.10 537 582 2.6E-8 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal PhaeoP54_04080 9d1739362a095852763fffe7464ec509 771 Gene3D G3DSA:2.150.10.10 311 386 1.2E-5 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal PhaeoP54_04080 9d1739362a095852763fffe7464ec509 771 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 576 594 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site PhaeoP54_04080 9d1739362a095852763fffe7464ec509 771 SUPERFAMILY SSF51120 115 261 2.62E-12 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal PhaeoP54_04080 9d1739362a095852763fffe7464ec509 771 SUPERFAMILY SSF51120 31 107 9.81E-9 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal PhaeoP54_00260 0acf993feb9f8396ed86f3a1028ba868 629 SMART SM00278 605 624 2.3 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 PhaeoP54_00260 0acf993feb9f8396ed86f3a1028ba868 629 SMART SM00278 573 592 11.0 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 PhaeoP54_00260 0acf993feb9f8396ed86f3a1028ba868 629 Pfam PF12826 Helix-hairpin-helix motif 578 627 1.7E-7 T 14-10-2018 PhaeoP54_00260 0acf993feb9f8396ed86f3a1028ba868 629 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 398 559 7.5E-51 T 14-10-2018 IPR001162 UvrC family homology region PhaeoP54_00260 0acf993feb9f8396ed86f3a1028ba868 629 Pfam PF02151 UvrB/uvrC motif 221 252 1.0E-7 T 14-10-2018 IPR001943 UVR domain GO:0005515 PhaeoP54_00260 0acf993feb9f8396ed86f3a1028ba868 629 SUPERFAMILY SSF47781 539 626 1.62E-22 T 14-10-2018 IPR010994 RuvA domain 2-like PhaeoP54_00260 0acf993feb9f8396ed86f3a1028ba868 629 Hamap MF_00203 UvrABC system protein C [uvrC]. 21 624 26.874 T 14-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 PhaeoP54_00260 0acf993feb9f8396ed86f3a1028ba868 629 Gene3D G3DSA:3.30.420.340 391 566 2.3E-48 T 14-10-2018 IPR038476 UvrC homology region 2 superfamily PhaeoP54_00260 0acf993feb9f8396ed86f3a1028ba868 629 SMART SM00465 34 114 4.1E-19 T 14-10-2018 IPR000305 GIY-YIG endonuclease PhaeoP54_00260 0acf993feb9f8396ed86f3a1028ba868 629 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 27 604 2.5E-168 T 14-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 PhaeoP54_00260 0acf993feb9f8396ed86f3a1028ba868 629 Gene3D G3DSA:1.10.150.20 567 625 2.0E-18 T 14-10-2018 PhaeoP54_00260 0acf993feb9f8396ed86f3a1028ba868 629 SUPERFAMILY SSF82771 34 116 1.44E-19 T 14-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 PhaeoP54_00260 0acf993feb9f8396ed86f3a1028ba868 629 Gene3D G3DSA:3.40.1440.10 22 118 1.4E-30 T 14-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 PhaeoP54_00260 0acf993feb9f8396ed86f3a1028ba868 629 SUPERFAMILY SSF46600 208 259 5.89E-13 T 14-10-2018 IPR036876 UVR domain superfamily PhaeoP54_00260 0acf993feb9f8396ed86f3a1028ba868 629 Pfam PF01541 GIY-YIG catalytic domain 36 109 3.0E-7 T 14-10-2018 IPR000305 GIY-YIG endonuclease PhaeoP54_02493 65d7fc345bb1a86c8cf6dd13f769b301 287 Pfam PF13103 TonB C terminal 201 280 9.3E-15 T 14-10-2018 PhaeoP54_02493 65d7fc345bb1a86c8cf6dd13f769b301 287 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 217 286 1.8E-18 T 14-10-2018 IPR006260 TonB/TolA, C-terminal PhaeoP54_02493 65d7fc345bb1a86c8cf6dd13f769b301 287 SUPERFAMILY SSF74653 117 286 2.85E-18 T 14-10-2018 PhaeoP54_02493 65d7fc345bb1a86c8cf6dd13f769b301 287 Gene3D G3DSA:3.30.1150.10 175 286 4.0E-23 T 14-10-2018 PhaeoP54_03522 ea710302a6e77b0591a33b461fde065b 442 Gene3D G3DSA:3.40.50.12240 13 437 3.9E-119 T 14-10-2018 PhaeoP54_03522 ea710302a6e77b0591a33b461fde065b 442 SUPERFAMILY SSF52540 97 362 9.06E-85 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_03522 ea710302a6e77b0591a33b461fde065b 442 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 348 357 - T 14-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 PhaeoP54_03522 ea710302a6e77b0591a33b461fde065b 442 SMART SM00382 158 342 6.8E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_03522 ea710302a6e77b0591a33b461fde065b 442 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 9 422 6.3E-134 T 14-10-2018 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 PhaeoP54_03522 ea710302a6e77b0591a33b461fde065b 442 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 146 357 6.5E-67 T 14-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 PhaeoP54_01350 affbbe519171811c4243f5b0843f9bf0 828 Gene3D G3DSA:3.20.20.10 29 281 3.0E-108 T 14-10-2018 IPR029066 PLP-binding barrel PhaeoP54_01350 affbbe519171811c4243f5b0843f9bf0 828 SUPERFAMILY SSF50621 263 419 1.47E-33 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 PhaeoP54_01350 affbbe519171811c4243f5b0843f9bf0 828 SUPERFAMILY SSF51419 21 280 9.29E-65 T 14-10-2018 IPR029066 PLP-binding barrel PhaeoP54_01350 affbbe519171811c4243f5b0843f9bf0 828 PRINTS PR01182 Ornithine decarboxylase signature 92 116 2.9E-6 T 14-10-2018 IPR002433 Ornithine decarboxylase GO:0006596 PhaeoP54_01350 affbbe519171811c4243f5b0843f9bf0 828 PRINTS PR01182 Ornithine decarboxylase signature 343 353 2.9E-6 T 14-10-2018 IPR002433 Ornithine decarboxylase GO:0006596 PhaeoP54_01350 affbbe519171811c4243f5b0843f9bf0 828 PRINTS PR01182 Ornithine decarboxylase signature 48 75 2.9E-6 T 14-10-2018 IPR002433 Ornithine decarboxylase GO:0006596 PhaeoP54_01350 affbbe519171811c4243f5b0843f9bf0 828 PRINTS PR01182 Ornithine decarboxylase signature 22 46 2.9E-6 T 14-10-2018 IPR002433 Ornithine decarboxylase GO:0006596 PhaeoP54_01350 affbbe519171811c4243f5b0843f9bf0 828 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 34 278 3.7E-43 T 14-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 PhaeoP54_01350 affbbe519171811c4243f5b0843f9bf0 828 SUPERFAMILY SSF47203 689 823 9.33E-7 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 PhaeoP54_01350 affbbe519171811c4243f5b0843f9bf0 828 Gene3D G3DSA:2.40.110.10 579 688 2.1E-19 T 14-10-2018 PhaeoP54_01350 affbbe519171811c4243f5b0843f9bf0 828 Gene3D G3DSA:2.40.37.10 17 413 3.0E-108 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 PhaeoP54_01350 affbbe519171811c4243f5b0843f9bf0 828 Gene3D G3DSA:1.20.140.10 689 722 2.1E-19 T 14-10-2018 PhaeoP54_01350 affbbe519171811c4243f5b0843f9bf0 828 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 218 234 - T 14-10-2018 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site PhaeoP54_01350 affbbe519171811c4243f5b0843f9bf0 828 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 182 195 9.1E-5 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 PhaeoP54_01350 affbbe519171811c4243f5b0843f9bf0 828 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 269 288 9.1E-5 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 PhaeoP54_01350 affbbe519171811c4243f5b0843f9bf0 828 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 50 68 9.1E-5 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 PhaeoP54_01350 affbbe519171811c4243f5b0843f9bf0 828 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 690 820 2.6E-5 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PhaeoP54_01350 affbbe519171811c4243f5b0843f9bf0 828 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 581 672 1.4E-10 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 PhaeoP54_01350 affbbe519171811c4243f5b0843f9bf0 828 SUPERFAMILY SSF56645 471 682 2.09E-25 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 PhaeoP54_01350 affbbe519171811c4243f5b0843f9bf0 828 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 279 376 1.9E-10 T 14-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 PhaeoP54_01350 affbbe519171811c4243f5b0843f9bf0 828 Gene3D G3DSA:1.10.540.10 527 578 2.1E-19 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 PhaeoP54_02263 95c471efa92d8002c81e585fc389fc8e 157 Gene3D G3DSA:3.40.630.30 2 154 1.2E-6 T 14-10-2018 PhaeoP54_02263 95c471efa92d8002c81e585fc389fc8e 157 SUPERFAMILY SSF55729 15 150 7.62E-8 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase PhaeoP54_02313 08de043bb2ebde79756ee5d233326721 197 Pfam PF03167 Uracil DNA glycosylase superfamily 37 185 8.0E-22 T 14-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 PhaeoP54_02313 08de043bb2ebde79756ee5d233326721 197 Gene3D G3DSA:3.40.470.10 1 197 2.1E-64 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 PhaeoP54_02313 08de043bb2ebde79756ee5d233326721 197 SMART SM00986 33 189 9.9E-30 T 14-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 PhaeoP54_02313 08de043bb2ebde79756ee5d233326721 197 SMART SM00987 33 189 9.9E-30 T 14-10-2018 PhaeoP54_02313 08de043bb2ebde79756ee5d233326721 197 SUPERFAMILY SSF52141 4 195 7.85E-55 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 PhaeoP54_03625 5b8e21e778923fbfb376681fe25a5f8e 600 Pfam PF01321 Creatinase/Prolidase N-terminal domain 13 135 6.1E-12 T 14-10-2018 IPR000587 Creatinase, N-terminal GO:0016787 PhaeoP54_03625 5b8e21e778923fbfb376681fe25a5f8e 600 Gene3D G3DSA:3.90.230.10 308 600 2.2E-82 T 14-10-2018 PhaeoP54_03625 5b8e21e778923fbfb376681fe25a5f8e 600 Pfam PF16189 Creatinase/Prolidase N-terminal domain 154 314 2.1E-34 T 14-10-2018 PhaeoP54_03625 5b8e21e778923fbfb376681fe25a5f8e 600 Pfam PF00557 Metallopeptidase family M24 345 534 8.6E-40 T 14-10-2018 IPR000994 Peptidase M24 PhaeoP54_03625 5b8e21e778923fbfb376681fe25a5f8e 600 Pfam PF16188 C-terminal region of peptidase_M24 541 600 1.3E-16 T 14-10-2018 IPR032416 Peptidase M24, C-terminal domain PhaeoP54_03625 5b8e21e778923fbfb376681fe25a5f8e 600 SUPERFAMILY SSF55920 311 556 7.98E-47 T 14-10-2018 IPR036005 Creatinase/aminopeptidase-like PhaeoP54_03625 5b8e21e778923fbfb376681fe25a5f8e 600 SUPERFAMILY SSF53092 11 133 2.44E-9 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal PhaeoP54_03625 5b8e21e778923fbfb376681fe25a5f8e 600 Gene3D G3DSA:3.40.350.10 153 298 2.1E-27 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal PhaeoP54_03625 5b8e21e778923fbfb376681fe25a5f8e 600 Gene3D G3DSA:3.40.350.10 3 152 1.1E-33 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal PhaeoP54_01410 c483b25ada199941581f9ee6dddd6452 154 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 9 148 1.6E-54 T 14-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 PhaeoP54_01410 c483b25ada199941581f9ee6dddd6452 154 Pfam PF07977 FabA-like domain 17 144 2.0E-33 T 14-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 PhaeoP54_01410 c483b25ada199941581f9ee6dddd6452 154 Gene3D G3DSA:3.10.129.10 2 154 2.3E-57 T 14-10-2018 PhaeoP54_01410 c483b25ada199941581f9ee6dddd6452 154 SUPERFAMILY SSF54637 8 149 1.67E-45 T 14-10-2018 IPR029069 HotDog domain superfamily PhaeoP54_01410 c483b25ada199941581f9ee6dddd6452 154 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 8 151 31.631 T 14-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 PhaeoP54_00760 c9fd1363d2348d696ab5516765c82733 164 Pfam PF07331 Tripartite tricarboxylate transporter TctB family 6 153 7.0E-18 T 14-10-2018 IPR009936 Protein of unknown function DUF1468 PhaeoP54_02277 a6ac663f0298988783565a1db4ac4cc5 421 Pfam PF00266 Aminotransferase class-V 13 343 1.4E-29 T 14-10-2018 IPR000192 Aminotransferase class V domain PhaeoP54_02277 a6ac663f0298988783565a1db4ac4cc5 421 Gene3D G3DSA:3.90.1150.10 18 388 1.4E-96 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 PhaeoP54_02277 a6ac663f0298988783565a1db4ac4cc5 421 SUPERFAMILY SSF53383 11 384 4.87E-91 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PhaeoP54_02277 a6ac663f0298988783565a1db4ac4cc5 421 Gene3D G3DSA:3.40.640.10 23 270 1.4E-96 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PhaeoP54_02277 a6ac663f0298988783565a1db4ac4cc5 421 PIRSF PIRSF000524 6 404 1.6E-116 T 14-10-2018 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832|Reactome: R-HSA-389661|Reactome: R-HSA-9033241 PhaeoP54_03095 2b530da5924de5a85632b79a871075f7 710 Gene3D G3DSA:1.10.3210.10 1 191 9.5E-79 T 14-10-2018 PhaeoP54_03095 2b530da5924de5a85632b79a871075f7 710 Gene3D G3DSA:3.30.70.260 622 704 2.4E-7 T 14-10-2018 PhaeoP54_03095 2b530da5924de5a85632b79a871075f7 710 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 26 696 2.5E-209 T 14-10-2018 IPR004811 RelA/SpoT family GO:0015969 PhaeoP54_03095 2b530da5924de5a85632b79a871075f7 710 Gene3D G3DSA:3.30.460.10 195 325 3.1E-44 T 14-10-2018 PhaeoP54_03095 2b530da5924de5a85632b79a871075f7 710 Gene3D G3DSA:3.10.20.30 382 454 4.5E-28 T 14-10-2018 IPR012675 Beta-grasp domain superfamily PhaeoP54_03095 2b530da5924de5a85632b79a871075f7 710 Pfam PF13328 HD domain 26 175 1.2E-50 T 14-10-2018 IPR003607 HD/PDEase domain PhaeoP54_03095 2b530da5924de5a85632b79a871075f7 710 Pfam PF04607 Region found in RelA / SpoT proteins 235 343 3.1E-37 T 14-10-2018 IPR007685 RelA/SpoT GO:0015969 PhaeoP54_03095 2b530da5924de5a85632b79a871075f7 710 SUPERFAMILY SSF55021 625 697 1.83E-6 T 14-10-2018 PhaeoP54_03095 2b530da5924de5a85632b79a871075f7 710 Pfam PF02824 TGS domain 389 447 2.6E-18 T 14-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 PhaeoP54_03095 2b530da5924de5a85632b79a871075f7 710 SMART SM00954 235 345 1.2E-60 T 14-10-2018 IPR007685 RelA/SpoT GO:0015969 PhaeoP54_03095 2b530da5924de5a85632b79a871075f7 710 SUPERFAMILY SSF81271 375 447 1.2E-19 T 14-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 PhaeoP54_03095 2b530da5924de5a85632b79a871075f7 710 Pfam PF13291 ACT domain 623 698 7.9E-15 T 14-10-2018 IPR002912 ACT domain PhaeoP54_03095 2b530da5924de5a85632b79a871075f7 710 SMART SM00471 41 153 3.2E-10 T 14-10-2018 IPR003607 HD/PDEase domain PhaeoP54_03095 2b530da5924de5a85632b79a871075f7 710 SUPERFAMILY SSF81301 181 392 4.58E-57 T 14-10-2018 PhaeoP54_03095 2b530da5924de5a85632b79a871075f7 710 SUPERFAMILY SSF109604 5 191 2.35E-70 T 14-10-2018 PhaeoP54_03683 204a757f3768b0f0f4338df5ea67558d 397 Gene3D G3DSA:1.10.540.10 2 118 4.1E-17 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 PhaeoP54_03683 204a757f3768b0f0f4338df5ea67558d 397 SUPERFAMILY SSF56645 3 226 1.96E-41 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 PhaeoP54_03683 204a757f3768b0f0f4338df5ea67558d 397 Gene3D G3DSA:2.40.110.10 120 230 1.1E-20 T 14-10-2018 PhaeoP54_03683 204a757f3768b0f0f4338df5ea67558d 397 SUPERFAMILY SSF47203 225 379 2.74E-28 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 PhaeoP54_03683 204a757f3768b0f0f4338df5ea67558d 397 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 228 372 4.3E-24 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PhaeoP54_03683 204a757f3768b0f0f4338df5ea67558d 397 Gene3D G3DSA:1.20.140.10 231 376 3.0E-25 T 14-10-2018 PhaeoP54_03683 204a757f3768b0f0f4338df5ea67558d 397 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 9 117 4.5E-13 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 PhaeoP54_03683 204a757f3768b0f0f4338df5ea67558d 397 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 120 215 3.7E-17 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 PhaeoP54_00638 b4ddb7660188eb6d172c08c41a6cab78 387 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 11 135 9.3E-46 T 14-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 PhaeoP54_00638 b4ddb7660188eb6d172c08c41a6cab78 387 Pfam PF00117 Glutamine amidotransferase class-I 201 379 3.9E-45 T 14-10-2018 IPR017926 Glutamine amidotransferase PhaeoP54_00638 b4ddb7660188eb6d172c08c41a6cab78 387 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 11 382 4.9E-131 T 14-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 PhaeoP54_00638 b4ddb7660188eb6d172c08c41a6cab78 387 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 9 385 45.144 T 14-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 PhaeoP54_00638 b4ddb7660188eb6d172c08c41a6cab78 387 Gene3D G3DSA:3.50.30.20 9 158 3.2E-48 T 14-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 PhaeoP54_00638 b4ddb7660188eb6d172c08c41a6cab78 387 PRINTS PR00097 Anthranilate synthase component II signature 241 250 5.6E-6 T 14-10-2018 PhaeoP54_00638 b4ddb7660188eb6d172c08c41a6cab78 387 PRINTS PR00097 Anthranilate synthase component II signature 356 369 5.6E-6 T 14-10-2018 PhaeoP54_00638 b4ddb7660188eb6d172c08c41a6cab78 387 PRINTS PR00097 Anthranilate synthase component II signature 271 282 5.6E-6 T 14-10-2018 PhaeoP54_00638 b4ddb7660188eb6d172c08c41a6cab78 387 Gene3D G3DSA:3.40.50.880 160 384 1.1E-70 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like PhaeoP54_00638 b4ddb7660188eb6d172c08c41a6cab78 387 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 288 305 1.1E-37 T 14-10-2018 PhaeoP54_00638 b4ddb7660188eb6d172c08c41a6cab78 387 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 271 287 1.1E-37 T 14-10-2018 PhaeoP54_00638 b4ddb7660188eb6d172c08c41a6cab78 387 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 199 213 1.1E-37 T 14-10-2018 PhaeoP54_00638 b4ddb7660188eb6d172c08c41a6cab78 387 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 238 252 1.1E-37 T 14-10-2018 PhaeoP54_00638 b4ddb7660188eb6d172c08c41a6cab78 387 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 313 324 1.1E-37 T 14-10-2018 PhaeoP54_00638 b4ddb7660188eb6d172c08c41a6cab78 387 SUPERFAMILY SSF52021 10 155 1.44E-52 T 14-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 PhaeoP54_00638 b4ddb7660188eb6d172c08c41a6cab78 387 SMART SM01097 9 139 2.3E-75 T 14-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 PhaeoP54_00638 b4ddb7660188eb6d172c08c41a6cab78 387 SUPERFAMILY SSF52317 162 384 1.12E-60 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like PhaeoP54_00638 b4ddb7660188eb6d172c08c41a6cab78 387 PRINTS PR00096 Glutamine amidotransferase superfamily signature 271 282 1.6E-11 T 14-10-2018 PhaeoP54_00638 b4ddb7660188eb6d172c08c41a6cab78 387 PRINTS PR00096 Glutamine amidotransferase superfamily signature 356 369 1.6E-11 T 14-10-2018 PhaeoP54_00638 b4ddb7660188eb6d172c08c41a6cab78 387 PRINTS PR00096 Glutamine amidotransferase superfamily signature 241 250 1.6E-11 T 14-10-2018 PhaeoP54_01947 e7c7a5910e209d973e1db7a4d057310f 407 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 245 254 - T 14-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 PhaeoP54_01947 e7c7a5910e209d973e1db7a4d057310f 407 Gene3D G3DSA:3.40.640.10 63 297 4.2E-168 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PhaeoP54_01947 e7c7a5910e209d973e1db7a4d057310f 407 Gene3D G3DSA:3.90.1150.10 14 388 4.2E-168 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 PhaeoP54_01947 e7c7a5910e209d973e1db7a4d057310f 407 SUPERFAMILY SSF53383 3 396 3.85E-110 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PhaeoP54_01947 e7c7a5910e209d973e1db7a4d057310f 407 TIGRFAM TIGR01821 5aminolev_synth: 5-aminolevulinic acid synthase 2 402 7.3E-203 T 14-10-2018 IPR010961 Tetrapyrrole biosynthesis, 5-aminolevulinic acid synthase GO:0003870|GO:0030170|GO:0033014 KEGG: 00260+2.3.1.37|KEGG: 00860+2.3.1.37|MetaCyc: PWY-5189|MetaCyc: PWY-7536|Reactome: R-HSA-189451 PhaeoP54_01947 e7c7a5910e209d973e1db7a4d057310f 407 Pfam PF00155 Aminotransferase class I and II 47 390 1.4E-70 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 PhaeoP54_01898 1a0fc500373a52e298bb548310cb8d4f 331 TIGRFAM TIGR03558 oxido_grp_1: luciferase family oxidoreductase, group 1 4 326 7.4E-131 T 14-10-2018 IPR019949 Luciferase family oxidoreductase, group 1 PhaeoP54_01898 1a0fc500373a52e298bb548310cb8d4f 331 SUPERFAMILY SSF51679 1 326 4.32E-78 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 PhaeoP54_01898 1a0fc500373a52e298bb548310cb8d4f 331 Pfam PF00296 Luciferase-like monooxygenase 15 237 3.4E-28 T 14-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 PhaeoP54_01898 1a0fc500373a52e298bb548310cb8d4f 331 Gene3D G3DSA:3.20.20.30 1 330 1.1E-94 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 PhaeoP54_01566 01d2e58d3ea9b3ff6e5aa20ea912f98e 346 Gene3D G3DSA:1.10.287.130 115 185 1.3E-24 T 14-10-2018 PhaeoP54_01566 01d2e58d3ea9b3ff6e5aa20ea912f98e 346 PRINTS PR00344 Bacterial sensor protein C-terminal signature 291 301 4.6E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PhaeoP54_01566 01d2e58d3ea9b3ff6e5aa20ea912f98e 346 PRINTS PR00344 Bacterial sensor protein C-terminal signature 308 326 4.6E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PhaeoP54_01566 01d2e58d3ea9b3ff6e5aa20ea912f98e 346 PRINTS PR00344 Bacterial sensor protein C-terminal signature 332 345 4.6E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PhaeoP54_01566 01d2e58d3ea9b3ff6e5aa20ea912f98e 346 PRINTS PR00344 Bacterial sensor protein C-terminal signature 273 287 4.6E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PhaeoP54_01566 01d2e58d3ea9b3ff6e5aa20ea912f98e 346 SMART SM00388 118 185 4.3E-21 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PhaeoP54_01566 01d2e58d3ea9b3ff6e5aa20ea912f98e 346 Gene3D G3DSA:3.30.565.10 190 346 1.9E-44 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PhaeoP54_01566 01d2e58d3ea9b3ff6e5aa20ea912f98e 346 SUPERFAMILY SSF55874 175 346 1.96E-43 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PhaeoP54_01566 01d2e58d3ea9b3ff6e5aa20ea912f98e 346 SMART SM00387 231 346 1.2E-35 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PhaeoP54_01566 01d2e58d3ea9b3ff6e5aa20ea912f98e 346 Pfam PF00512 His Kinase A (phospho-acceptor) domain 118 184 5.1E-18 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PhaeoP54_01566 01d2e58d3ea9b3ff6e5aa20ea912f98e 346 SUPERFAMILY SSF47384 108 185 6.67E-20 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 PhaeoP54_01566 01d2e58d3ea9b3ff6e5aa20ea912f98e 346 SUPERFAMILY SSF55785 4 59 3.77E-5 T 14-10-2018 IPR035965 PAS domain superfamily PhaeoP54_01566 01d2e58d3ea9b3ff6e5aa20ea912f98e 346 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 231 345 1.2E-25 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PhaeoP54_01566 01d2e58d3ea9b3ff6e5aa20ea912f98e 346 Gene3D G3DSA:3.30.450.20 2 114 9.4E-7 T 14-10-2018 PhaeoP54_03624 48086b9803067793fa84b8514d2bdbfb 332 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 239 304 2.5E-17 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 PhaeoP54_03624 48086b9803067793fa84b8514d2bdbfb 332 Gene3D G3DSA:3.40.50.300 5 332 3.9E-96 T 14-10-2018 PhaeoP54_03624 48086b9803067793fa84b8514d2bdbfb 332 Pfam PF00005 ABC transporter 36 185 2.2E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PhaeoP54_03624 48086b9803067793fa84b8514d2bdbfb 332 ProSitePatterns PS00211 ABC transporters family signature. 160 174 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PhaeoP54_03624 48086b9803067793fa84b8514d2bdbfb 332 SUPERFAMILY SSF52540 28 258 5.21E-70 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_03624 48086b9803067793fa84b8514d2bdbfb 332 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 237 324 5.3E-25 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 PhaeoP54_03624 48086b9803067793fa84b8514d2bdbfb 332 SMART SM00382 45 237 1.4E-19 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_03421 c862ca2bb6979d3baacc7203409011fa 384 SUPERFAMILY SSF81301 7 147 1.06E-39 T 14-10-2018 PhaeoP54_03421 c862ca2bb6979d3baacc7203409011fa 384 SUPERFAMILY SSF81891 148 383 2.09E-38 T 14-10-2018 PhaeoP54_03421 c862ca2bb6979d3baacc7203409011fa 384 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 183 239 8.2E-10 T 14-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 PhaeoP54_03421 c862ca2bb6979d3baacc7203409011fa 384 Gene3D G3DSA:1.10.3090.10 149 298 4.1E-28 T 14-10-2018 PhaeoP54_03421 c862ca2bb6979d3baacc7203409011fa 384 Pfam PF01743 Poly A polymerase head domain 28 150 6.1E-27 T 14-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 PhaeoP54_03421 c862ca2bb6979d3baacc7203409011fa 384 Gene3D G3DSA:3.30.460.10 2 147 1.2E-40 T 14-10-2018 PhaeoP54_00044 87fd11de053c3b30f38c1b760067e2cd 419 Pfam PF06792 Uncharacterised protein family (UPF0261) 4 402 6.5E-108 T 14-10-2018 IPR008322 Uncharacterised protein family UPF0261 PhaeoP54_00044 87fd11de053c3b30f38c1b760067e2cd 419 Gene3D G3DSA:3.40.50.12030 186 402 1.3E-53 T 14-10-2018 PhaeoP54_00044 87fd11de053c3b30f38c1b760067e2cd 419 PIRSF PIRSF033271 2 406 1.3E-120 T 14-10-2018 IPR008322 Uncharacterised protein family UPF0261 PhaeoP54_00044 87fd11de053c3b30f38c1b760067e2cd 419 Gene3D G3DSA:3.40.50.12020 1 180 1.3E-40 T 14-10-2018 PhaeoP54_03745 73c0a89538db2ea54149d8691ca88f3b 495 SUPERFAMILY SSF51905 3 216 9.64E-49 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PhaeoP54_03745 73c0a89538db2ea54149d8691ca88f3b 495 Pfam PF00743 Flavin-binding monooxygenase-like 5 419 1.1E-37 T 14-10-2018 IPR020946 Flavin monooxygenase-like GO:0004499|GO:0050660|GO:0050661|GO:0055114 PhaeoP54_03745 73c0a89538db2ea54149d8691ca88f3b 495 PRINTS PR00370 Flavin-containing monooxygenase (FMO) signature 5 21 2.4E-17 T 14-10-2018 IPR000960 Flavin monooxygenase FMO GO:0004499|GO:0050660|GO:0050661|GO:0055114 PhaeoP54_03745 73c0a89538db2ea54149d8691ca88f3b 495 PRINTS PR00370 Flavin-containing monooxygenase (FMO) signature 191 206 2.4E-17 T 14-10-2018 IPR000960 Flavin monooxygenase FMO GO:0004499|GO:0050660|GO:0050661|GO:0055114 PhaeoP54_03745 73c0a89538db2ea54149d8691ca88f3b 495 PRINTS PR00370 Flavin-containing monooxygenase (FMO) signature 132 148 2.4E-17 T 14-10-2018 IPR000960 Flavin monooxygenase FMO GO:0004499|GO:0050660|GO:0050661|GO:0055114 PhaeoP54_03745 73c0a89538db2ea54149d8691ca88f3b 495 PRINTS PR00370 Flavin-containing monooxygenase (FMO) signature 29 53 2.4E-17 T 14-10-2018 IPR000960 Flavin monooxygenase FMO GO:0004499|GO:0050660|GO:0050661|GO:0055114 PhaeoP54_03745 73c0a89538db2ea54149d8691ca88f3b 495 PRINTS PR00370 Flavin-containing monooxygenase (FMO) signature 164 178 2.4E-17 T 14-10-2018 IPR000960 Flavin monooxygenase FMO GO:0004499|GO:0050660|GO:0050661|GO:0055114 PhaeoP54_03745 73c0a89538db2ea54149d8691ca88f3b 495 SUPERFAMILY SSF51905 175 349 1.42E-5 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PhaeoP54_03745 73c0a89538db2ea54149d8691ca88f3b 495 PIRSF PIRSF000332 3 464 4.0E-41 T 14-10-2018 IPR000960 Flavin monooxygenase FMO GO:0004499|GO:0050660|GO:0050661|GO:0055114 PhaeoP54_02644 3f3f896ba7a1ef54e5622d1215ba3bdd 329 Pfam PF12680 SnoaL-like domain 194 292 9.2E-8 T 14-10-2018 IPR037401 SnoaL-like domain PhaeoP54_02644 3f3f896ba7a1ef54e5622d1215ba3bdd 329 SUPERFAMILY SSF54427 191 322 1.71E-21 T 14-10-2018 IPR032710 NTF2-like domain superfamily PhaeoP54_02644 3f3f896ba7a1ef54e5622d1215ba3bdd 329 Pfam PF07366 SnoaL-like polyketide cyclase 19 141 5.9E-7 T 14-10-2018 IPR009959 Polyketide cyclase SnoaL-like GO:0030638 MetaCyc: PWY-7352|MetaCyc: PWY-7354 PhaeoP54_02644 3f3f896ba7a1ef54e5622d1215ba3bdd 329 Gene3D G3DSA:3.10.450.50 17 153 3.1E-19 T 14-10-2018 PhaeoP54_02644 3f3f896ba7a1ef54e5622d1215ba3bdd 329 Gene3D G3DSA:3.10.450.50 188 326 6.4E-19 T 14-10-2018 PhaeoP54_02644 3f3f896ba7a1ef54e5622d1215ba3bdd 329 SUPERFAMILY SSF54427 8 152 1.34E-24 T 14-10-2018 IPR032710 NTF2-like domain superfamily PhaeoP54_01431 2a4a47fa9d49c72d5ba4a157d05056d4 471 Gene3D G3DSA:1.10.10.10 17 107 5.4E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_01431 2a4a47fa9d49c72d5ba4a157d05056d4 471 Pfam PF00392 Bacterial regulatory proteins, gntR family 20 83 7.8E-16 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PhaeoP54_01431 2a4a47fa9d49c72d5ba4a157d05056d4 471 Pfam PF00155 Aminotransferase class I and II 122 456 2.3E-23 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 PhaeoP54_01431 2a4a47fa9d49c72d5ba4a157d05056d4 471 SUPERFAMILY SSF46785 17 87 7.5E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_01431 2a4a47fa9d49c72d5ba4a157d05056d4 471 SMART SM00345 24 83 4.9E-16 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PhaeoP54_01431 2a4a47fa9d49c72d5ba4a157d05056d4 471 Gene3D G3DSA:3.90.1150.10 122 459 2.6E-60 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 PhaeoP54_01431 2a4a47fa9d49c72d5ba4a157d05056d4 471 Gene3D G3DSA:3.40.640.10 143 358 2.6E-60 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PhaeoP54_01431 2a4a47fa9d49c72d5ba4a157d05056d4 471 SUPERFAMILY SSF53383 77 464 3.58E-67 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PhaeoP54_02975 6db2e8976f08e7a68d2146c3055a448c 462 Gene3D G3DSA:1.10.287.130 177 301 6.5E-8 T 14-10-2018 PhaeoP54_02975 6db2e8976f08e7a68d2146c3055a448c 462 SUPERFAMILY SSF55874 307 457 2.49E-30 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PhaeoP54_02975 6db2e8976f08e7a68d2146c3055a448c 462 SMART SM00387 349 459 1.2E-26 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PhaeoP54_02975 6db2e8976f08e7a68d2146c3055a448c 462 SMART SM00388 241 305 1.1E-5 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PhaeoP54_02975 6db2e8976f08e7a68d2146c3055a448c 462 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 350 457 1.8E-18 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PhaeoP54_02975 6db2e8976f08e7a68d2146c3055a448c 462 SUPERFAMILY SSF47384 232 304 1.67E-7 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 PhaeoP54_02975 6db2e8976f08e7a68d2146c3055a448c 462 PRINTS PR00344 Bacterial sensor protein C-terminal signature 443 456 3.7E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PhaeoP54_02975 6db2e8976f08e7a68d2146c3055a448c 462 PRINTS PR00344 Bacterial sensor protein C-terminal signature 419 437 3.7E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PhaeoP54_02975 6db2e8976f08e7a68d2146c3055a448c 462 PRINTS PR00344 Bacterial sensor protein C-terminal signature 389 403 3.7E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PhaeoP54_02975 6db2e8976f08e7a68d2146c3055a448c 462 Gene3D G3DSA:3.30.565.10 316 459 8.4E-31 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PhaeoP54_03774 ad8a2e805f4db4a53f71796a07961713 231 Gene3D G3DSA:3.40.50.300 3 229 4.4E-56 T 14-10-2018 PhaeoP54_03774 ad8a2e805f4db4a53f71796a07961713 231 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 36 49 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 PhaeoP54_03774 ad8a2e805f4db4a53f71796a07961713 231 SMART SM00382 32 224 5.7E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_03774 ad8a2e805f4db4a53f71796a07961713 231 Pfam PF00005 ABC transporter 27 176 1.1E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PhaeoP54_03774 ad8a2e805f4db4a53f71796a07961713 231 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PhaeoP54_03774 ad8a2e805f4db4a53f71796a07961713 231 SUPERFAMILY SSF52540 3 222 4.33E-50 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_00388 ad1a9fa7fa3462120577b647aa4245f3 229 SUPERFAMILY SSF51366 7 207 3.3E-69 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 PhaeoP54_00388 ad1a9fa7fa3462120577b647aa4245f3 229 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 8 205 2.4E-81 T 14-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 PhaeoP54_00388 ad1a9fa7fa3462120577b647aa4245f3 229 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 36 50 - T 14-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 PhaeoP54_00388 ad1a9fa7fa3462120577b647aa4245f3 229 Gene3D G3DSA:3.20.20.70 1 213 7.5E-81 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PhaeoP54_00388 ad1a9fa7fa3462120577b647aa4245f3 229 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 138 159 - T 14-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 PhaeoP54_00388 ad1a9fa7fa3462120577b647aa4245f3 229 Pfam PF00834 Ribulose-phosphate 3 epimerase family 8 202 5.8E-78 T 14-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 PhaeoP54_00388 ad1a9fa7fa3462120577b647aa4245f3 229 PIRSF PIRSF001461 3 227 7.0E-86 T 14-10-2018 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 PhaeoP54_00248 1cbb51008441e73952229594388eb48a 506 PIRSF PIRSF001492 1 506 1.0E-193 T 14-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 PhaeoP54_00248 1cbb51008441e73952229594388eb48a 506 Gene3D G3DSA:3.40.720.10 6 505 8.2E-195 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 PhaeoP54_00248 1cbb51008441e73952229594388eb48a 506 Hamap MF_01038 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [gpmI]. 5 506 45.651 T 14-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 PhaeoP54_00248 1cbb51008441e73952229594388eb48a 506 SUPERFAMILY SSF53649 4 505 7.98E-71 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 PhaeoP54_00248 1cbb51008441e73952229594388eb48a 506 Pfam PF01676 Metalloenzyme superfamily 5 494 4.3E-71 T 14-10-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 PhaeoP54_00248 1cbb51008441e73952229594388eb48a 506 Gene3D G3DSA:3.40.1450.10 78 307 8.2E-195 T 14-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 PhaeoP54_00248 1cbb51008441e73952229594388eb48a 506 TIGRFAM TIGR01307 pgm_bpd_ind: phosphoglycerate mutase (2,3-diphosphoglycerate-independent) 5 505 9.8E-191 T 14-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 PhaeoP54_00248 1cbb51008441e73952229594388eb48a 506 SUPERFAMILY SSF64158 79 298 6.02E-76 T 14-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 PhaeoP54_00248 1cbb51008441e73952229594388eb48a 506 Pfam PF06415 BPG-independent PGAM N-terminus (iPGM_N) 83 292 7.3E-74 T 14-10-2018 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 PhaeoP54_03766 6e8f60cecfd2f7991d78620d87a5d27e 416 Gene3D G3DSA:3.30.9.10 114 344 1.2E-95 T 14-10-2018 PhaeoP54_03766 6e8f60cecfd2f7991d78620d87a5d27e 416 SUPERFAMILY SSF51905 32 403 1.3E-48 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PhaeoP54_03766 6e8f60cecfd2f7991d78620d87a5d27e 416 Gene3D G3DSA:3.50.50.60 33 388 1.2E-95 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PhaeoP54_03766 6e8f60cecfd2f7991d78620d87a5d27e 416 SUPERFAMILY SSF54373 270 337 1.28E-5 T 14-10-2018 PhaeoP54_03766 6e8f60cecfd2f7991d78620d87a5d27e 416 TIGRFAM TIGR01373 soxB: sarcosine oxidase, beta subunit family 2 406 6.9E-202 T 14-10-2018 IPR006278 Sarcosine oxidase subunit beta GO:0008115|GO:0046653|GO:0055114 KEGG: 00260+1.5.3.1|MetaCyc: PWY-3661|MetaCyc: PWY-4722 PhaeoP54_03766 6e8f60cecfd2f7991d78620d87a5d27e 416 Pfam PF01266 FAD dependent oxidoreductase 33 379 2.0E-54 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 PhaeoP54_01062 2ad88fe0b69a1119f4589c720bdf4fe6 345 Gene3D G3DSA:3.20.20.10 10 209 3.0E-93 T 14-10-2018 IPR029066 PLP-binding barrel PhaeoP54_01062 2ad88fe0b69a1119f4589c720bdf4fe6 345 SMART SM01005 221 344 9.3E-53 T 14-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 PhaeoP54_01062 2ad88fe0b69a1119f4589c720bdf4fe6 345 SUPERFAMILY SSF51419 8 228 1.31E-52 T 14-10-2018 IPR029066 PLP-binding barrel PhaeoP54_01062 2ad88fe0b69a1119f4589c720bdf4fe6 345 TIGRFAM TIGR00492 alr: alanine racemase 6 343 1.1E-64 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 PhaeoP54_01062 2ad88fe0b69a1119f4589c720bdf4fe6 345 PRINTS PR00992 Alanine racemase signature 276 293 4.7E-29 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 PhaeoP54_01062 2ad88fe0b69a1119f4589c720bdf4fe6 345 PRINTS PR00992 Alanine racemase signature 187 214 4.7E-29 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 PhaeoP54_01062 2ad88fe0b69a1119f4589c720bdf4fe6 345 PRINTS PR00992 Alanine racemase signature 119 131 4.7E-29 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 PhaeoP54_01062 2ad88fe0b69a1119f4589c720bdf4fe6 345 PRINTS PR00992 Alanine racemase signature 25 41 4.7E-29 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 PhaeoP54_01062 2ad88fe0b69a1119f4589c720bdf4fe6 345 PRINTS PR00992 Alanine racemase signature 61 79 4.7E-29 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 PhaeoP54_01062 2ad88fe0b69a1119f4589c720bdf4fe6 345 PRINTS PR00992 Alanine racemase signature 326 339 4.7E-29 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 PhaeoP54_01062 2ad88fe0b69a1119f4589c720bdf4fe6 345 Pfam PF01168 Alanine racemase, N-terminal domain 9 214 2.0E-43 T 14-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 PhaeoP54_01062 2ad88fe0b69a1119f4589c720bdf4fe6 345 Pfam PF00842 Alanine racemase, C-terminal domain 221 343 7.6E-36 T 14-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 PhaeoP54_01062 2ad88fe0b69a1119f4589c720bdf4fe6 345 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 30 40 - T 14-10-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 PhaeoP54_01062 2ad88fe0b69a1119f4589c720bdf4fe6 345 Hamap MF_01201 Alanine racemase. 1 344 26.94 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 PhaeoP54_01062 2ad88fe0b69a1119f4589c720bdf4fe6 345 SUPERFAMILY SSF50621 219 344 3.38E-39 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 PhaeoP54_01062 2ad88fe0b69a1119f4589c720bdf4fe6 345 Gene3D G3DSA:2.40.37.10 7 343 3.0E-93 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 PhaeoP54_01724 221e8486ebf02c1bc04f2697f80b393b 499 TIGRFAM TIGR01722 MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 6 483 4.1E-185 T 14-10-2018 IPR010061 Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00640+1.2.1.27|MetaCyc: PWY-5642|Reactome: R-HSA-70895 PhaeoP54_01724 221e8486ebf02c1bc04f2697f80b393b 499 Gene3D G3DSA:3.40.605.10 23 460 7.2E-147 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 PhaeoP54_01724 221e8486ebf02c1bc04f2697f80b393b 499 SUPERFAMILY SSF53720 3 483 1.02E-147 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 PhaeoP54_01724 221e8486ebf02c1bc04f2697f80b393b 499 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 274 285 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 PhaeoP54_01724 221e8486ebf02c1bc04f2697f80b393b 499 Pfam PF00171 Aldehyde dehydrogenase family 17 479 7.7E-138 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 PhaeoP54_01724 221e8486ebf02c1bc04f2697f80b393b 499 Gene3D G3DSA:3.40.309.10 249 452 7.2E-147 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 PhaeoP54_01159 5f0f8e0f5761b47642e898baca60750f 842 Pfam PF00512 His Kinase A (phospho-acceptor) domain 461 526 1.3E-19 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PhaeoP54_01159 5f0f8e0f5761b47642e898baca60750f 842 Gene3D G3DSA:3.30.565.10 525 690 3.8E-49 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PhaeoP54_01159 5f0f8e0f5761b47642e898baca60750f 842 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 573 685 1.4E-26 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PhaeoP54_01159 5f0f8e0f5761b47642e898baca60750f 842 SUPERFAMILY SSF47384 447 528 5.3E-22 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 PhaeoP54_01159 5f0f8e0f5761b47642e898baca60750f 842 SMART SM01079 52 228 1.4E-45 T 14-10-2018 IPR006189 CHASE domain PhaeoP54_01159 5f0f8e0f5761b47642e898baca60750f 842 Pfam PF08447 PAS fold 337 420 1.4E-10 T 14-10-2018 IPR013655 PAS fold-3 GO:0005515 PhaeoP54_01159 5f0f8e0f5761b47642e898baca60750f 842 SUPERFAMILY SSF52172 712 831 1.85E-34 T 14-10-2018 IPR011006 CheY-like superfamily PhaeoP54_01159 5f0f8e0f5761b47642e898baca60750f 842 SMART SM00448 710 822 1.6E-30 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PhaeoP54_01159 5f0f8e0f5761b47642e898baca60750f 842 SUPERFAMILY SSF55785 297 425 2.44E-14 T 14-10-2018 IPR035965 PAS domain superfamily PhaeoP54_01159 5f0f8e0f5761b47642e898baca60750f 842 Pfam PF00072 Response regulator receiver domain 713 822 4.4E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PhaeoP54_01159 5f0f8e0f5761b47642e898baca60750f 842 Gene3D G3DSA:3.30.450.20 305 423 4.0E-17 T 14-10-2018 PhaeoP54_01159 5f0f8e0f5761b47642e898baca60750f 842 Pfam PF03924 CHASE domain 113 225 1.5E-18 T 14-10-2018 IPR006189 CHASE domain PhaeoP54_01159 5f0f8e0f5761b47642e898baca60750f 842 PRINTS PR00344 Bacterial sensor protein C-terminal signature 612 626 1.2E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PhaeoP54_01159 5f0f8e0f5761b47642e898baca60750f 842 PRINTS PR00344 Bacterial sensor protein C-terminal signature 630 640 1.2E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PhaeoP54_01159 5f0f8e0f5761b47642e898baca60750f 842 PRINTS PR00344 Bacterial sensor protein C-terminal signature 671 684 1.2E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PhaeoP54_01159 5f0f8e0f5761b47642e898baca60750f 842 PRINTS PR00344 Bacterial sensor protein C-terminal signature 647 665 1.2E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PhaeoP54_01159 5f0f8e0f5761b47642e898baca60750f 842 SMART SM00388 461 526 7.9E-26 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PhaeoP54_01159 5f0f8e0f5761b47642e898baca60750f 842 Gene3D G3DSA:3.40.50.12740 711 840 1.2E-37 T 14-10-2018 PhaeoP54_01159 5f0f8e0f5761b47642e898baca60750f 842 SMART SM00387 573 687 2.0E-35 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PhaeoP54_01159 5f0f8e0f5761b47642e898baca60750f 842 Gene3D G3DSA:1.10.287.130 425 524 4.3E-31 T 14-10-2018 PhaeoP54_01159 5f0f8e0f5761b47642e898baca60750f 842 SUPERFAMILY SSF55874 515 685 2.62E-44 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PhaeoP54_01647 8d5f5f80521fc199a04d91abc6c3254c 590 SUPERFAMILY SSF48452 354 559 1.02E-19 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 PhaeoP54_01647 8d5f5f80521fc199a04d91abc6c3254c 590 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 19 165 5.9E-5 T 14-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 PhaeoP54_01647 8d5f5f80521fc199a04d91abc6c3254c 590 SUPERFAMILY SSF55073 12 185 3.14E-33 T 14-10-2018 IPR029787 Nucleotide cyclase PhaeoP54_01647 8d5f5f80521fc199a04d91abc6c3254c 590 SUPERFAMILY SSF52964 194 302 4.84E-6 T 14-10-2018 PhaeoP54_01647 8d5f5f80521fc199a04d91abc6c3254c 590 Gene3D G3DSA:3.30.70.1230 12 187 2.2E-36 T 14-10-2018 IPR029787 Nucleotide cyclase PhaeoP54_01647 8d5f5f80521fc199a04d91abc6c3254c 590 Gene3D G3DSA:1.25.40.10 252 583 1.8E-26 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 PhaeoP54_03063 7476fd6a5736ab7f11fb414a68af08c9 236 Pfam PF04028 Domain of unknown function (DUF374) 74 136 3.6E-17 T 14-10-2018 IPR007172 Domain of unknown function DUF374 PhaeoP54_03063 7476fd6a5736ab7f11fb414a68af08c9 236 ProDom PD032436 LIPOPROTEIN UNCHARACTERIZED PROBABLE CJ0457C SIMILAR TRANSFERASE BACTERIA PRECURSOR SIGNAL CC0304 21 135 3.0E-37 T 14-10-2018 IPR007172 Domain of unknown function DUF374 PhaeoP54_02862 2c7fb453fb684a8f394bfe8b2a475f84 271 Gene3D G3DSA:2.40.10.10 38 140 1.1E-20 T 14-10-2018 PhaeoP54_02862 2c7fb453fb684a8f394bfe8b2a475f84 271 SUPERFAMILY SSF50494 39 217 5.85E-27 T 14-10-2018 IPR009003 Peptidase S1, PA clan PhaeoP54_02862 2c7fb453fb684a8f394bfe8b2a475f84 271 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 63 68 - T 14-10-2018 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 PhaeoP54_02862 2c7fb453fb684a8f394bfe8b2a475f84 271 Pfam PF00089 Trypsin 44 164 1.9E-12 T 14-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 PhaeoP54_02862 2c7fb453fb684a8f394bfe8b2a475f84 271 SMART SM00020 39 217 0.0046 T 14-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 PhaeoP54_02862 2c7fb453fb684a8f394bfe8b2a475f84 271 Gene3D G3DSA:2.40.10.10 141 199 1.1E-20 T 14-10-2018 PhaeoP54_02862 2c7fb453fb684a8f394bfe8b2a475f84 271 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 185 197 1.2E-7 T 14-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 PhaeoP54_02862 2c7fb453fb684a8f394bfe8b2a475f84 271 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 53 68 1.2E-7 T 14-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 PhaeoP54_02862 2c7fb453fb684a8f394bfe8b2a475f84 271 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 118 132 1.2E-7 T 14-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 PhaeoP54_03585 e0921a4cdd3e9b18a20c8db0963da194 511 Pfam PF03109 ABC1 family 115 233 2.7E-32 T 14-10-2018 IPR004147 UbiB domain PhaeoP54_03585 e0921a4cdd3e9b18a20c8db0963da194 511 SUPERFAMILY SSF56112 98 435 1.11E-28 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily PhaeoP54_03585 e0921a4cdd3e9b18a20c8db0963da194 511 TIGRFAM TIGR01982 UbiB: 2-polyprenylphenol 6-hydroxylase 8 444 2.4E-157 T 14-10-2018 IPR010232 Probable protein kinase UbiB GO:0006744 PhaeoP54_03908 a9872e31dc5ab1c235f0aca3a0769696 120 SMART SM00418 21 99 1.2E-17 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 PhaeoP54_03908 a9872e31dc5ab1c235f0aca3a0769696 120 Gene3D G3DSA:1.10.10.10 19 119 1.1E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_03908 a9872e31dc5ab1c235f0aca3a0769696 120 SUPERFAMILY SSF46785 22 117 2.32E-24 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_03908 a9872e31dc5ab1c235f0aca3a0769696 120 Pfam PF12840 Helix-turn-helix domain 21 79 6.4E-14 T 14-10-2018 PhaeoP54_03908 a9872e31dc5ab1c235f0aca3a0769696 120 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 70 85 1.0E-7 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 PhaeoP54_03908 a9872e31dc5ab1c235f0aca3a0769696 120 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 55 70 1.0E-7 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 PhaeoP54_03908 a9872e31dc5ab1c235f0aca3a0769696 120 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 23 38 1.0E-7 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 PhaeoP54_01542 4b7cd41b40a8c8f64baf807fd659c8b6 61 Pfam PF12073 Protein of unknown function (DUF3553) 8 55 3.4E-23 T 14-10-2018 IPR021938 Protein of unknown function DUF3553 PhaeoP54_03808 d97cf0c998cfad128577889179bff31b 258 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 40 149 1.9E-15 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 PhaeoP54_03808 d97cf0c998cfad128577889179bff31b 258 SUPERFAMILY SSF161098 41 240 1.07E-32 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_03808 d97cf0c998cfad128577889179bff31b 258 Gene3D G3DSA:1.10.3720.10 28 256 5.1E-41 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_03808 d97cf0c998cfad128577889179bff31b 258 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 65 254 5.3E-14 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PhaeoP54_03603 f0e5da76f5b57b77e6550c53abf106d6 387 Gene3D G3DSA:3.40.50.2000 185 322 5.1E-6 T 14-10-2018 PhaeoP54_03603 f0e5da76f5b57b77e6550c53abf106d6 387 SUPERFAMILY SSF53756 216 358 3.14E-8 T 14-10-2018 PhaeoP54_01478 e9d19b7a39353b4402ef4a5b8870b12d 1155 Pfam PF00270 DEAD/DEAH box helicase 597 756 5.8E-17 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 PhaeoP54_01478 e9d19b7a39353b4402ef4a5b8870b12d 1155 Gene3D G3DSA:3.30.2060.10 120 206 3.0E-90 T 14-10-2018 PhaeoP54_01478 e9d19b7a39353b4402ef4a5b8870b12d 1155 Pfam PF03461 TRCF domain 1002 1094 1.5E-25 T 14-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 PhaeoP54_01478 e9d19b7a39353b4402ef4a5b8870b12d 1155 Gene3D G3DSA:3.40.50.11180 28 320 3.0E-90 T 14-10-2018 PhaeoP54_01478 e9d19b7a39353b4402ef4a5b8870b12d 1155 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 24 1111 27.186 T 14-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 PhaeoP54_01478 e9d19b7a39353b4402ef4a5b8870b12d 1155 SUPERFAMILY SSF52540 774 982 1.62E-41 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_01478 e9d19b7a39353b4402ef4a5b8870b12d 1155 SMART SM00982 1001 1101 1.7E-44 T 14-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 PhaeoP54_01478 e9d19b7a39353b4402ef4a5b8870b12d 1155 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 137 1074 0.0 T 14-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 PhaeoP54_01478 e9d19b7a39353b4402ef4a5b8870b12d 1155 SUPERFAMILY SSF141259 466 532 2.88E-19 T 14-10-2018 IPR036101 CarD-like/TRCF domain superfamily PhaeoP54_01478 e9d19b7a39353b4402ef4a5b8870b12d 1155 SUPERFAMILY SSF52540 533 776 3.58E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_01478 e9d19b7a39353b4402ef4a5b8870b12d 1155 Pfam PF00271 Helicase conserved C-terminal domain 796 901 1.4E-15 T 14-10-2018 IPR001650 Helicase, C-terminal PhaeoP54_01478 e9d19b7a39353b4402ef4a5b8870b12d 1155 SMART SM01058 474 568 6.5E-40 T 14-10-2018 IPR003711 CarD-like/TRCF domain PhaeoP54_01478 e9d19b7a39353b4402ef4a5b8870b12d 1155 SUPERFAMILY SSF52540 4 342 5.13E-89 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_01478 e9d19b7a39353b4402ef4a5b8870b12d 1155 SUPERFAMILY SSF52540 347 465 2.63E-19 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_01478 e9d19b7a39353b4402ef4a5b8870b12d 1155 Gene3D G3DSA:3.90.1150.50 998 1143 3.7E-36 T 14-10-2018 IPR037235 TRCF-like, C-terminal domain PhaeoP54_01478 e9d19b7a39353b4402ef4a5b8870b12d 1155 Pfam PF02559 CarD-like/TRCF domain 475 565 3.0E-24 T 14-10-2018 IPR003711 CarD-like/TRCF domain PhaeoP54_01478 e9d19b7a39353b4402ef4a5b8870b12d 1155 SMART SM00490 818 902 2.6E-17 T 14-10-2018 IPR001650 Helicase, C-terminal PhaeoP54_01478 e9d19b7a39353b4402ef4a5b8870b12d 1155 SMART SM00487 592 782 2.0E-34 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain PhaeoP54_01478 e9d19b7a39353b4402ef4a5b8870b12d 1155 Gene3D G3DSA:3.40.50.300 473 982 4.3E-217 T 14-10-2018 PhaeoP54_01478 e9d19b7a39353b4402ef4a5b8870b12d 1155 Gene3D G3DSA:3.40.50.300 534 773 4.3E-217 T 14-10-2018 PhaeoP54_01478 e9d19b7a39353b4402ef4a5b8870b12d 1155 Gene3D G3DSA:2.30.30.840 478 533 4.3E-217 T 14-10-2018 PhaeoP54_01478 e9d19b7a39353b4402ef4a5b8870b12d 1155 SUPERFAMILY SSF143517 995 1139 2.22E-38 T 14-10-2018 IPR037235 TRCF-like, C-terminal domain PhaeoP54_00474 0930592212ed96fb09cd87b031cceaa7 136 Pfam PF01609 Transposase DDE domain 2 122 6.0E-13 T 14-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 PhaeoP54_01500 45b3e4532c441d0d627705b0db0851e2 908 SMART SM00434 16 495 2.5E-276 T 14-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 PhaeoP54_01500 45b3e4532c441d0d627705b0db0851e2 908 Gene3D G3DSA:3.90.199.10 38 517 4.4E-214 T 14-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 PhaeoP54_01500 45b3e4532c441d0d627705b0db0851e2 908 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 792 824 0.0084 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 PhaeoP54_01500 45b3e4532c441d0d627705b0db0851e2 908 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 839 883 4.8E-9 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 PhaeoP54_01500 45b3e4532c441d0d627705b0db0851e2 908 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 645 689 4.3E-4 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 PhaeoP54_01500 45b3e4532c441d0d627705b0db0851e2 908 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 693 741 3.5E-9 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 PhaeoP54_01500 45b3e4532c441d0d627705b0db0851e2 908 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 534 581 5.5E-15 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 PhaeoP54_01500 45b3e4532c441d0d627705b0db0851e2 908 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 586 633 1.1E-5 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 PhaeoP54_01500 45b3e4532c441d0d627705b0db0851e2 908 Gene3D G3DSA:3.30.1360.40 241 337 4.4E-214 T 14-10-2018 PhaeoP54_01500 45b3e4532c441d0d627705b0db0851e2 908 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 16 886 0.0 T 14-10-2018 PhaeoP54_01500 45b3e4532c441d0d627705b0db0851e2 908 Gene3D G3DSA:1.10.268.10 374 489 4.4E-214 T 14-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 PhaeoP54_01500 45b3e4532c441d0d627705b0db0851e2 908 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 37 501 1.3E-148 T 14-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 PhaeoP54_01500 45b3e4532c441d0d627705b0db0851e2 908 Gene3D G3DSA:2.120.10.90 526 760 3.4E-76 T 14-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal PhaeoP54_01500 45b3e4532c441d0d627705b0db0851e2 908 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 3 887 22.892 T 14-10-2018 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 PhaeoP54_01500 45b3e4532c441d0d627705b0db0851e2 908 Gene3D G3DSA:2.120.10.90 771 887 4.1E-20 T 14-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal PhaeoP54_01500 45b3e4532c441d0d627705b0db0851e2 908 SUPERFAMILY SSF101904 529 894 2.09E-88 T 14-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal PhaeoP54_01500 45b3e4532c441d0d627705b0db0851e2 908 SUPERFAMILY SSF56719 35 518 1.18E-174 T 14-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 PhaeoP54_02047 0901df05dbb0da4cc22da0dbbc0241f1 652 Gene3D G3DSA:3.40.50.670 414 652 2.5E-87 T 14-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 PhaeoP54_02047 0901df05dbb0da4cc22da0dbbc0241f1 652 SMART SM00387 39 185 2.6E-24 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PhaeoP54_02047 0901df05dbb0da4cc22da0dbbc0241f1 652 SUPERFAMILY SSF56719 409 644 3.4E-75 T 14-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 PhaeoP54_02047 0901df05dbb0da4cc22da0dbbc0241f1 652 Gene3D G3DSA:3.30.230.10 234 411 6.7E-44 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PhaeoP54_02047 0901df05dbb0da4cc22da0dbbc0241f1 652 SUPERFAMILY SSF54211 234 406 4.17E-40 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold PhaeoP54_02047 0901df05dbb0da4cc22da0dbbc0241f1 652 PRINTS PR01098 Topoisomerase IV subunit B signature 186 203 2.0E-17 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 PhaeoP54_02047 0901df05dbb0da4cc22da0dbbc0241f1 652 PRINTS PR01098 Topoisomerase IV subunit B signature 204 225 2.0E-17 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 PhaeoP54_02047 0901df05dbb0da4cc22da0dbbc0241f1 652 PRINTS PR01098 Topoisomerase IV subunit B signature 381 406 2.0E-17 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 PhaeoP54_02047 0901df05dbb0da4cc22da0dbbc0241f1 652 PRINTS PR01098 Topoisomerase IV subunit B signature 357 380 2.0E-17 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 PhaeoP54_02047 0901df05dbb0da4cc22da0dbbc0241f1 652 PRINTS PR01098 Topoisomerase IV subunit B signature 559 581 2.0E-17 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 PhaeoP54_02047 0901df05dbb0da4cc22da0dbbc0241f1 652 PRINTS PR01098 Topoisomerase IV subunit B signature 469 490 2.0E-17 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 PhaeoP54_02047 0901df05dbb0da4cc22da0dbbc0241f1 652 PRINTS PR01098 Topoisomerase IV subunit B signature 525 541 2.0E-17 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 PhaeoP54_02047 0901df05dbb0da4cc22da0dbbc0241f1 652 PRINTS PR01098 Topoisomerase IV subunit B signature 604 618 2.0E-17 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 PhaeoP54_02047 0901df05dbb0da4cc22da0dbbc0241f1 652 ProSitePatterns PS00177 DNA topoisomerase II signature. 437 445 - T 14-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 PhaeoP54_02047 0901df05dbb0da4cc22da0dbbc0241f1 652 SUPERFAMILY SSF55874 14 217 1.38E-58 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PhaeoP54_02047 0901df05dbb0da4cc22da0dbbc0241f1 652 Gene3D G3DSA:3.30.565.10 10 233 6.0E-74 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PhaeoP54_02047 0901df05dbb0da4cc22da0dbbc0241f1 652 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 578 641 3.5E-24 T 14-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 PhaeoP54_02047 0901df05dbb0da4cc22da0dbbc0241f1 652 TIGRFAM TIGR01055 parE_Gneg: DNA topoisomerase IV, B subunit 12 644 4.8E-228 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 PhaeoP54_02047 0901df05dbb0da4cc22da0dbbc0241f1 652 SMART SM00433 43 645 1.2E-286 T 14-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 PhaeoP54_02047 0901df05dbb0da4cc22da0dbbc0241f1 652 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 39 184 5.4E-20 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PhaeoP54_02047 0901df05dbb0da4cc22da0dbbc0241f1 652 Pfam PF00204 DNA gyrase B 234 406 1.6E-42 T 14-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 PhaeoP54_02047 0901df05dbb0da4cc22da0dbbc0241f1 652 Pfam PF01751 Toprim domain 434 534 1.1E-14 T 14-10-2018 IPR006171 TOPRIM domain PhaeoP54_02047 0901df05dbb0da4cc22da0dbbc0241f1 652 PRINTS PR00418 DNA topoisomerase II family signature 582 598 3.5E-62 T 14-10-2018 PhaeoP54_02047 0901df05dbb0da4cc22da0dbbc0241f1 652 PRINTS PR00418 DNA topoisomerase II family signature 286 299 3.5E-62 T 14-10-2018 PhaeoP54_02047 0901df05dbb0da4cc22da0dbbc0241f1 652 PRINTS PR00418 DNA topoisomerase II family signature 519 536 3.5E-62 T 14-10-2018 PhaeoP54_02047 0901df05dbb0da4cc22da0dbbc0241f1 652 PRINTS PR00418 DNA topoisomerase II family signature 501 517 3.5E-62 T 14-10-2018 PhaeoP54_02047 0901df05dbb0da4cc22da0dbbc0241f1 652 PRINTS PR00418 DNA topoisomerase II family signature 78 91 3.5E-62 T 14-10-2018 PhaeoP54_02047 0901df05dbb0da4cc22da0dbbc0241f1 652 PRINTS PR00418 DNA topoisomerase II family signature 435 449 3.5E-62 T 14-10-2018 PhaeoP54_02047 0901df05dbb0da4cc22da0dbbc0241f1 652 PRINTS PR00418 DNA topoisomerase II family signature 122 136 3.5E-62 T 14-10-2018 PhaeoP54_02047 0901df05dbb0da4cc22da0dbbc0241f1 652 PRINTS PR00418 DNA topoisomerase II family signature 539 551 3.5E-62 T 14-10-2018 PhaeoP54_02047 0901df05dbb0da4cc22da0dbbc0241f1 652 PRINTS PR00418 DNA topoisomerase II family signature 43 58 3.5E-62 T 14-10-2018 PhaeoP54_02047 0901df05dbb0da4cc22da0dbbc0241f1 652 Hamap MF_00938 DNA topoisomerase 4 subunit B [parE]. 11 649 41.794 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 PhaeoP54_02711 5483bea875306a2b150eede03c7ee8cd 176 SUPERFAMILY SSF55729 7 163 7.2E-29 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase PhaeoP54_02711 5483bea875306a2b150eede03c7ee8cd 176 Gene3D G3DSA:3.40.630.30 6 173 1.4E-31 T 14-10-2018 PhaeoP54_02711 5483bea875306a2b150eede03c7ee8cd 176 Pfam PF13673 Acetyltransferase (GNAT) domain 51 157 1.6E-14 T 14-10-2018 IPR000182 GNAT domain PhaeoP54_02909 b1f1cccf2069d416972c735a145fc7f8 536 ProSitePatterns PS00211 ABC transporters family signature. 432 446 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PhaeoP54_02909 b1f1cccf2069d416972c735a145fc7f8 536 Pfam PF00005 ABC transporter 35 191 1.2E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PhaeoP54_02909 b1f1cccf2069d416972c735a145fc7f8 536 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 511 534 0.0032 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 PhaeoP54_02909 b1f1cccf2069d416972c735a145fc7f8 536 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 243 272 1.0E-6 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 PhaeoP54_02909 b1f1cccf2069d416972c735a145fc7f8 536 ProSitePatterns PS00211 ABC transporters family signature. 164 178 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PhaeoP54_02909 b1f1cccf2069d416972c735a145fc7f8 536 SUPERFAMILY SSF52540 14 263 7.0E-68 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_02909 b1f1cccf2069d416972c735a145fc7f8 536 SUPERFAMILY SSF52540 282 531 3.75E-68 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_02909 b1f1cccf2069d416972c735a145fc7f8 536 Gene3D G3DSA:3.40.50.300 12 282 3.1E-86 T 14-10-2018 PhaeoP54_02909 b1f1cccf2069d416972c735a145fc7f8 536 Gene3D G3DSA:3.40.50.300 283 536 3.3E-83 T 14-10-2018 PhaeoP54_02909 b1f1cccf2069d416972c735a145fc7f8 536 SMART SM00382 43 241 2.2E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_02909 b1f1cccf2069d416972c735a145fc7f8 536 SMART SM00382 318 509 1.5E-18 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_02909 b1f1cccf2069d416972c735a145fc7f8 536 Pfam PF00005 ABC transporter 310 460 6.4E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PhaeoP54_02889 67ee882ff90ec4420ebf807b3e39b975 332 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 253 320 7.0E-16 T 14-10-2018 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 PhaeoP54_02889 67ee882ff90ec4420ebf807b3e39b975 332 SUPERFAMILY SSF54782 245 329 6.8E-24 T 14-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 PhaeoP54_02889 67ee882ff90ec4420ebf807b3e39b975 332 PRINTS PR00151 Porphobilinogen deaminase signature 255 272 6.0E-40 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 PhaeoP54_02889 67ee882ff90ec4420ebf807b3e39b975 332 PRINTS PR00151 Porphobilinogen deaminase signature 168 185 6.0E-40 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 PhaeoP54_02889 67ee882ff90ec4420ebf807b3e39b975 332 PRINTS PR00151 Porphobilinogen deaminase signature 149 166 6.0E-40 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 PhaeoP54_02889 67ee882ff90ec4420ebf807b3e39b975 332 PRINTS PR00151 Porphobilinogen deaminase signature 70 90 6.0E-40 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 PhaeoP54_02889 67ee882ff90ec4420ebf807b3e39b975 332 PRINTS PR00151 Porphobilinogen deaminase signature 101 120 6.0E-40 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 PhaeoP54_02889 67ee882ff90ec4420ebf807b3e39b975 332 PIRSF PIRSF001438 8 332 1.5E-109 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 PhaeoP54_02889 67ee882ff90ec4420ebf807b3e39b975 332 Gene3D G3DSA:3.30.160.40 246 330 2.1E-24 T 14-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 PhaeoP54_02889 67ee882ff90ec4420ebf807b3e39b975 332 SUPERFAMILY SSF53850 24 243 1.47E-70 T 14-10-2018 PhaeoP54_02889 67ee882ff90ec4420ebf807b3e39b975 332 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 256 272 - T 14-10-2018 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 PhaeoP54_02889 67ee882ff90ec4420ebf807b3e39b975 332 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 25 237 4.5E-70 T 14-10-2018 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 PhaeoP54_02889 67ee882ff90ec4420ebf807b3e39b975 332 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 24 322 34.605 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 PhaeoP54_02889 67ee882ff90ec4420ebf807b3e39b975 332 Gene3D G3DSA:3.40.190.10 128 227 7.5E-74 T 14-10-2018 PhaeoP54_02889 67ee882ff90ec4420ebf807b3e39b975 332 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 25 322 6.0E-98 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 PhaeoP54_02889 67ee882ff90ec4420ebf807b3e39b975 332 Gene3D G3DSA:3.40.190.10 25 235 7.5E-74 T 14-10-2018 PhaeoP54_01856 19a7a4b4b1aa662342345b31797fe5b5 263 SUPERFAMILY SSF51197 75 232 1.14E-12 T 14-10-2018 PhaeoP54_02476 73d4eaba1029253e6c0e77262f5d689e 924 PIRSF PIRSF036643 1 924 0.0 T 14-10-2018 PhaeoP54_02476 73d4eaba1029253e6c0e77262f5d689e 924 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 232 249 - T 14-10-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 PhaeoP54_02476 73d4eaba1029253e6c0e77262f5d689e 924 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 194 205 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PhaeoP54_02476 73d4eaba1029253e6c0e77262f5d689e 924 SUPERFAMILY SSF54292 5 127 1.55E-31 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 PhaeoP54_02476 73d4eaba1029253e6c0e77262f5d689e 924 SMART SM00929 88 126 0.0068 T 14-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PhaeoP54_02476 73d4eaba1029253e6c0e77262f5d689e 924 Gene3D G3DSA:3.40.50.740 309 759 3.2E-166 T 14-10-2018 PhaeoP54_02476 73d4eaba1029253e6c0e77262f5d689e 924 Gene3D G3DSA:2.20.25.90 228 280 3.2E-21 T 14-10-2018 PhaeoP54_02476 73d4eaba1029253e6c0e77262f5d689e 924 SUPERFAMILY SSF50692 771 916 2.03E-43 T 14-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily PhaeoP54_02476 73d4eaba1029253e6c0e77262f5d689e 924 SUPERFAMILY SSF53706 229 753 2.62E-193 T 14-10-2018 PhaeoP54_02476 73d4eaba1029253e6c0e77262f5d689e 924 Gene3D G3DSA:3.30.70.20 129 211 5.8E-20 T 14-10-2018 PhaeoP54_02476 73d4eaba1029253e6c0e77262f5d689e 924 Gene3D G3DSA:2.40.40.20 796 917 2.7E-39 T 14-10-2018 PhaeoP54_02476 73d4eaba1029253e6c0e77262f5d689e 924 Pfam PF00037 4Fe-4S binding domain 192 209 1.0E-5 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PhaeoP54_02476 73d4eaba1029253e6c0e77262f5d689e 924 Pfam PF01568 Molydopterin dinucleotide binding domain 806 908 2.9E-25 T 14-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 PhaeoP54_02476 73d4eaba1029253e6c0e77262f5d689e 924 SMART SM00926 227 280 2.0E-18 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PhaeoP54_02476 73d4eaba1029253e6c0e77262f5d689e 924 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 229 280 1.4E-17 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PhaeoP54_02476 73d4eaba1029253e6c0e77262f5d689e 924 Gene3D G3DSA:3.40.228.10 375 573 3.2E-166 T 14-10-2018 PhaeoP54_02476 73d4eaba1029253e6c0e77262f5d689e 924 TIGRFAM TIGR01591 Fdh-alpha: formate dehydrogenase, alpha subunit 233 914 8.3E-222 T 14-10-2018 IPR006478 Formate dehydrogenase, alpha subunit GO:0008863|GO:0015942|GO:0055114 KEGG: 00630+1.17.1.9|KEGG: 00680+1.17.1.9|MetaCyc: PWY-1881|MetaCyc: PWY-5497|MetaCyc: PWY-6696|MetaCyc: PWY-7985 PhaeoP54_02476 73d4eaba1029253e6c0e77262f5d689e 924 Gene3D G3DSA:3.10.20.740 4 119 4.9E-24 T 14-10-2018 PhaeoP54_02476 73d4eaba1029253e6c0e77262f5d689e 924 SUPERFAMILY SSF54862 140 216 1.13E-14 T 14-10-2018 PhaeoP54_02476 73d4eaba1029253e6c0e77262f5d689e 924 Pfam PF00384 Molybdopterin oxidoreductase 283 720 5.4E-85 T 14-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PhaeoP54_02476 73d4eaba1029253e6c0e77262f5d689e 924 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 666 683 - T 14-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 PhaeoP54_02476 73d4eaba1029253e6c0e77262f5d689e 924 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 3 81 5.4E-19 T 14-10-2018 PhaeoP54_00349 4470295b67135eb97d67fb3e717f95f8 259 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 170 181 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PhaeoP54_00349 4470295b67135eb97d67fb3e717f95f8 259 Gene3D G3DSA:1.10.1060.10 129 259 4.6E-58 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 PhaeoP54_00349 4470295b67135eb97d67fb3e717f95f8 259 SUPERFAMILY SSF54292 28 128 3.46E-31 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 PhaeoP54_00349 4470295b67135eb97d67fb3e717f95f8 259 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 29 133 2.6E-31 T 14-10-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 PhaeoP54_00349 4470295b67135eb97d67fb3e717f95f8 259 SUPERFAMILY SSF46548 130 256 2.79E-36 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 PhaeoP54_00349 4470295b67135eb97d67fb3e717f95f8 259 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 32 251 6.3E-81 T 14-10-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 PhaeoP54_00349 4470295b67135eb97d67fb3e717f95f8 259 Pfam PF13534 4Fe-4S dicluster domain 169 242 5.5E-9 T 14-10-2018 PhaeoP54_00349 4470295b67135eb97d67fb3e717f95f8 259 Gene3D G3DSA:3.10.20.30 20 128 9.6E-44 T 14-10-2018 IPR012675 Beta-grasp domain superfamily PhaeoP54_00349 4470295b67135eb97d67fb3e717f95f8 259 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 80 88 - T 14-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 PhaeoP54_03948 1151b4387ee328348039ef2ea44970e3 346 Gene3D G3DSA:3.40.50.2300 178 307 1.5E-46 T 14-10-2018 PhaeoP54_03948 1151b4387ee328348039ef2ea44970e3 346 Gene3D G3DSA:1.10.260.40 12 75 5.5E-19 T 14-10-2018 PhaeoP54_03948 1151b4387ee328348039ef2ea44970e3 346 Gene3D G3DSA:3.40.50.2300 95 327 1.5E-46 T 14-10-2018 PhaeoP54_03948 1151b4387ee328348039ef2ea44970e3 346 SMART SM00354 17 87 1.4E-15 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 PhaeoP54_03948 1151b4387ee328348039ef2ea44970e3 346 SUPERFAMILY SSF47413 16 76 1.61E-14 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 PhaeoP54_03948 1151b4387ee328348039ef2ea44970e3 346 Pfam PF13377 Periplasmic binding protein-like domain 188 343 4.0E-13 T 14-10-2018 PhaeoP54_03948 1151b4387ee328348039ef2ea44970e3 346 Pfam PF00356 Bacterial regulatory proteins, lacI family 19 64 4.4E-12 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 PhaeoP54_03948 1151b4387ee328348039ef2ea44970e3 346 SUPERFAMILY SSF53822 95 343 1.06E-22 T 14-10-2018 IPR028082 Periplasmic binding protein-like I PhaeoP54_00558 7829bb0a22545dc1c1ce4a7f6200d3d5 343 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 343 169.391 T 14-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 PhaeoP54_00558 7829bb0a22545dc1c1ce4a7f6200d3d5 343 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 17 240 1.1E-108 T 14-10-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 PhaeoP54_00558 7829bb0a22545dc1c1ce4a7f6200d3d5 343 PRINTS PR00819 CbxX/CfqX superfamily signature 59 74 6.1E-6 T 14-10-2018 IPR000641 CbxX/CfqX GO:0005524 PhaeoP54_00558 7829bb0a22545dc1c1ce4a7f6200d3d5 343 PRINTS PR00819 CbxX/CfqX superfamily signature 172 191 6.1E-6 T 14-10-2018 IPR000641 CbxX/CfqX GO:0005524 PhaeoP54_00558 7829bb0a22545dc1c1ce4a7f6200d3d5 343 PRINTS PR00819 CbxX/CfqX superfamily signature 225 237 6.1E-6 T 14-10-2018 IPR000641 CbxX/CfqX GO:0005524 PhaeoP54_00558 7829bb0a22545dc1c1ce4a7f6200d3d5 343 Gene3D G3DSA:1.10.10.10 262 339 4.8E-31 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_00558 7829bb0a22545dc1c1ce4a7f6200d3d5 343 SMART SM00382 56 189 1.7E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_00558 7829bb0a22545dc1c1ce4a7f6200d3d5 343 Gene3D G3DSA:3.40.50.300 23 186 8.4E-40 T 14-10-2018 PhaeoP54_00558 7829bb0a22545dc1c1ce4a7f6200d3d5 343 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 258 331 1.6E-31 T 14-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 PhaeoP54_00558 7829bb0a22545dc1c1ce4a7f6200d3d5 343 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 256 336 2.0E-38 T 14-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 PhaeoP54_00558 7829bb0a22545dc1c1ce4a7f6200d3d5 343 SUPERFAMILY SSF52540 25 254 6.12E-54 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_00558 7829bb0a22545dc1c1ce4a7f6200d3d5 343 SUPERFAMILY SSF46785 261 335 2.58E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_00558 7829bb0a22545dc1c1ce4a7f6200d3d5 343 Gene3D G3DSA:1.10.8.60 187 261 1.7E-27 T 14-10-2018 PhaeoP54_00558 7829bb0a22545dc1c1ce4a7f6200d3d5 343 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 30 331 1.3E-132 T 14-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 PhaeoP54_01174 a7f17e184fc1226c1adfcfaa47f8c294 130 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 6 100 1.1E-12 T 14-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain PhaeoP54_01174 a7f17e184fc1226c1adfcfaa47f8c294 130 TIGRFAM TIGR01354 cyt_deam_tetra: cytidine deaminase 3 126 3.4E-38 T 14-10-2018 IPR006262 Cytidine deaminase, homotetrameric GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199|Reactome: R-HSA-6798695|Reactome: R-HSA-73614 PhaeoP54_01174 a7f17e184fc1226c1adfcfaa47f8c294 130 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 50 90 - T 14-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 PhaeoP54_01174 a7f17e184fc1226c1adfcfaa47f8c294 130 Gene3D G3DSA:3.40.140.10 1 129 1.0E-44 T 14-10-2018 PhaeoP54_01174 a7f17e184fc1226c1adfcfaa47f8c294 130 SUPERFAMILY SSF53927 3 128 1.74E-40 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 PhaeoP54_00030 b59aa3d696d0fa2ac4f573eb5007c917 341 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 117 333 1.7E-14 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PhaeoP54_00030 b59aa3d696d0fa2ac4f573eb5007c917 341 Gene3D G3DSA:3.40.190.10 191 291 7.7E-19 T 14-10-2018 PhaeoP54_00030 b59aa3d696d0fa2ac4f573eb5007c917 341 Gene3D G3DSA:3.40.190.10 111 330 7.7E-19 T 14-10-2018 PhaeoP54_00030 b59aa3d696d0fa2ac4f573eb5007c917 341 SUPERFAMILY SSF53850 98 333 1.0E-28 T 14-10-2018 PhaeoP54_00030 b59aa3d696d0fa2ac4f573eb5007c917 341 Pfam PF01476 LysM domain 31 78 6.8E-5 T 14-10-2018 IPR018392 LysM domain PhaeoP54_00030 b59aa3d696d0fa2ac4f573eb5007c917 341 Gene3D G3DSA:3.10.350.10 30 77 5.2E-7 T 14-10-2018 IPR036779 LysM domain superfamily PhaeoP54_00490 62a3f6e5c17d9d29cc6411311f1398b8 287 SUPERFAMILY SSF161098 49 276 1.06E-48 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_00490 62a3f6e5c17d9d29cc6411311f1398b8 287 Gene3D G3DSA:1.10.3720.10 45 286 3.5E-51 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_00490 62a3f6e5c17d9d29cc6411311f1398b8 287 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 80 277 4.6E-16 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PhaeoP54_03218 a9a22479af8c725f032321078ca4df00 780 PIRSF PIRSF036490 3 780 0.0 T 14-10-2018 IPR011408 Aldehyde dehydrogenase PhaeoP54_03218 a9a22479af8c725f032321078ca4df00 780 SUPERFAMILY SSF53720 33 485 6.15E-149 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 PhaeoP54_03218 a9a22479af8c725f032321078ca4df00 780 Gene3D G3DSA:3.40.605.10 503 780 1.4E-48 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 PhaeoP54_03218 a9a22479af8c725f032321078ca4df00 780 Pfam PF00171 Aldehyde dehydrogenase family 50 484 3.0E-149 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 PhaeoP54_03218 a9a22479af8c725f032321078ca4df00 780 Pfam PF00171 Aldehyde dehydrogenase family 529 749 2.3E-35 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 PhaeoP54_03218 a9a22479af8c725f032321078ca4df00 780 Gene3D G3DSA:3.40.309.10 269 456 1.7E-155 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 PhaeoP54_03218 a9a22479af8c725f032321078ca4df00 780 SUPERFAMILY SSF53720 506 748 4.06E-42 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 PhaeoP54_03218 a9a22479af8c725f032321078ca4df00 780 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 264 271 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 PhaeoP54_03218 a9a22479af8c725f032321078ca4df00 780 Gene3D G3DSA:3.40.605.10 39 484 1.7E-155 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 PhaeoP54_03061 802a3688650e0f1c67e6a094ecbecd96 730 Pfam PF13432 Tetratricopeptide repeat 64 124 3.8E-4 T 14-10-2018 PhaeoP54_03061 802a3688650e0f1c67e6a094ecbecd96 730 Gene3D G3DSA:3.40.50.2000 493 671 2.1E-103 T 14-10-2018 PhaeoP54_03061 802a3688650e0f1c67e6a094ecbecd96 730 Pfam PF13844 Glycosyl transferase family 41 496 684 4.2E-36 T 14-10-2018 IPR029489 O-GlcNAc transferase, C-terminal KEGG: 00514+2.4.1.255|MetaCyc: PWY-7437|Reactome: R-HSA-3214847|Reactome: R-HSA-5689603 PhaeoP54_03061 802a3688650e0f1c67e6a094ecbecd96 730 Pfam PF13844 Glycosyl transferase family 41 342 481 3.6E-13 T 14-10-2018 IPR029489 O-GlcNAc transferase, C-terminal KEGG: 00514+2.4.1.255|MetaCyc: PWY-7437|Reactome: R-HSA-3214847|Reactome: R-HSA-5689603 PhaeoP54_03061 802a3688650e0f1c67e6a094ecbecd96 730 SUPERFAMILY SSF48452 65 264 1.18E-33 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 PhaeoP54_03061 802a3688650e0f1c67e6a094ecbecd96 730 Gene3D G3DSA:1.25.40.10 40 318 2.8E-40 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 PhaeoP54_03061 802a3688650e0f1c67e6a094ecbecd96 730 SMART SM00028 193 226 0.067 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 PhaeoP54_03061 802a3688650e0f1c67e6a094ecbecd96 730 SMART SM00028 91 124 0.019 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 PhaeoP54_03061 802a3688650e0f1c67e6a094ecbecd96 730 SMART SM00028 159 192 0.097 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 PhaeoP54_03061 802a3688650e0f1c67e6a094ecbecd96 730 SMART SM00028 227 260 20.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 PhaeoP54_03061 802a3688650e0f1c67e6a094ecbecd96 730 SMART SM00028 125 158 5.9E-4 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 PhaeoP54_03061 802a3688650e0f1c67e6a094ecbecd96 730 Pfam PF13414 TPR repeat 132 172 2.4E-7 T 14-10-2018 PhaeoP54_03061 802a3688650e0f1c67e6a094ecbecd96 730 Gene3D G3DSA:3.40.50.11380 328 677 2.1E-103 T 14-10-2018 PhaeoP54_00080 1b5e2769a9c62e336c24f7751c05bdf3 764 SMART SM00448 627 742 1.0E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PhaeoP54_00080 1b5e2769a9c62e336c24f7751c05bdf3 764 SMART SM00448 460 570 9.7E-14 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PhaeoP54_00080 1b5e2769a9c62e336c24f7751c05bdf3 764 SUPERFAMILY SSF52172 461 572 5.41E-18 T 14-10-2018 IPR011006 CheY-like superfamily PhaeoP54_00080 1b5e2769a9c62e336c24f7751c05bdf3 764 SUPERFAMILY SSF55874 269 440 2.49E-46 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PhaeoP54_00080 1b5e2769a9c62e336c24f7751c05bdf3 764 Gene3D G3DSA:3.40.50.2300 614 745 1.7E-35 T 14-10-2018 PhaeoP54_00080 1b5e2769a9c62e336c24f7751c05bdf3 764 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 327 442 3.3E-32 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PhaeoP54_00080 1b5e2769a9c62e336c24f7751c05bdf3 764 Pfam PF12860 PAS fold 86 200 3.9E-10 T 14-10-2018 PhaeoP54_00080 1b5e2769a9c62e336c24f7751c05bdf3 764 SMART SM00388 215 280 5.7E-24 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PhaeoP54_00080 1b5e2769a9c62e336c24f7751c05bdf3 764 SMART SM00387 327 446 1.1E-38 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PhaeoP54_00080 1b5e2769a9c62e336c24f7751c05bdf3 764 Gene3D G3DSA:1.10.287.130 205 281 8.9E-26 T 14-10-2018 PhaeoP54_00080 1b5e2769a9c62e336c24f7751c05bdf3 764 Gene3D G3DSA:3.30.565.10 282 447 1.6E-51 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PhaeoP54_00080 1b5e2769a9c62e336c24f7751c05bdf3 764 PRINTS PR00344 Bacterial sensor protein C-terminal signature 404 422 2.3E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PhaeoP54_00080 1b5e2769a9c62e336c24f7751c05bdf3 764 PRINTS PR00344 Bacterial sensor protein C-terminal signature 369 383 2.3E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PhaeoP54_00080 1b5e2769a9c62e336c24f7751c05bdf3 764 PRINTS PR00344 Bacterial sensor protein C-terminal signature 428 441 2.3E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PhaeoP54_00080 1b5e2769a9c62e336c24f7751c05bdf3 764 SUPERFAMILY SSF47384 200 281 2.94E-22 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 PhaeoP54_00080 1b5e2769a9c62e336c24f7751c05bdf3 764 SUPERFAMILY SSF52172 627 747 3.42E-31 T 14-10-2018 IPR011006 CheY-like superfamily PhaeoP54_00080 1b5e2769a9c62e336c24f7751c05bdf3 764 Pfam PF00072 Response regulator receiver domain 629 742 1.2E-19 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PhaeoP54_00080 1b5e2769a9c62e336c24f7751c05bdf3 764 Pfam PF00072 Response regulator receiver domain 462 570 7.3E-14 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PhaeoP54_00080 1b5e2769a9c62e336c24f7751c05bdf3 764 Gene3D G3DSA:3.30.450.20 66 204 3.8E-7 T 14-10-2018 PhaeoP54_00080 1b5e2769a9c62e336c24f7751c05bdf3 764 Gene3D G3DSA:3.40.50.2300 460 573 4.5E-18 T 14-10-2018 PhaeoP54_00080 1b5e2769a9c62e336c24f7751c05bdf3 764 Pfam PF00512 His Kinase A (phospho-acceptor) domain 215 279 1.3E-19 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PhaeoP54_02651 1af29f5456ab04f0df296c36b3011779 335 SUPERFAMILY SSF55347 151 313 5.95E-70 T 14-10-2018 PhaeoP54_02651 1af29f5456ab04f0df296c36b3011779 335 Gene3D G3DSA:3.30.360.10 150 314 1.4E-142 T 14-10-2018 PhaeoP54_02651 1af29f5456ab04f0df296c36b3011779 335 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 149 156 - T 14-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 PhaeoP54_02651 1af29f5456ab04f0df296c36b3011779 335 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 156 312 2.1E-63 T 14-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 PhaeoP54_02651 1af29f5456ab04f0df296c36b3011779 335 PIRSF PIRSF000149 1 334 2.1E-132 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 PhaeoP54_02651 1af29f5456ab04f0df296c36b3011779 335 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 4 102 7.8E-34 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 PhaeoP54_02651 1af29f5456ab04f0df296c36b3011779 335 Gene3D G3DSA:3.40.50.720 4 324 1.4E-142 T 14-10-2018 PhaeoP54_02651 1af29f5456ab04f0df296c36b3011779 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 109 122 1.7E-38 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 PhaeoP54_02651 1af29f5456ab04f0df296c36b3011779 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 228 245 1.7E-38 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 PhaeoP54_02651 1af29f5456ab04f0df296c36b3011779 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 268 283 1.7E-38 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 PhaeoP54_02651 1af29f5456ab04f0df296c36b3011779 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 172 188 1.7E-38 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 PhaeoP54_02651 1af29f5456ab04f0df296c36b3011779 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 145 163 1.7E-38 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 PhaeoP54_02651 1af29f5456ab04f0df296c36b3011779 335 SMART SM00846 3 151 4.5E-85 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 PhaeoP54_02651 1af29f5456ab04f0df296c36b3011779 335 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 324 5.0E-127 T 14-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 PhaeoP54_02651 1af29f5456ab04f0df296c36b3011779 335 SUPERFAMILY SSF51735 1 178 2.09E-58 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PhaeoP54_04065 3ebc9b42fa06745b3f41b50ace1c0627 203 Pfam PF02397 Bacterial sugar transferase 5 200 2.4E-45 T 14-10-2018 IPR003362 Bacterial sugar transferase PhaeoP54_01995 4d7b072802220df6c0da9c1dd8e427c5 262 Gene3D G3DSA:3.30.465.10 54 165 1.9E-30 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 PhaeoP54_01995 4d7b072802220df6c0da9c1dd8e427c5 262 SMART SM01092 168 261 8.5E-18 T 14-10-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal PhaeoP54_01995 4d7b072802220df6c0da9c1dd8e427c5 262 Pfam PF00941 FAD binding domain in molybdopterin dehydrogenase 3 164 1.4E-40 T 14-10-2018 IPR002346 Molybdopterin dehydrogenase, FAD-binding GO:0016491|GO:0055114 PhaeoP54_01995 4d7b072802220df6c0da9c1dd8e427c5 262 SUPERFAMILY SSF56176 1 164 1.82E-47 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 PhaeoP54_01995 4d7b072802220df6c0da9c1dd8e427c5 262 Gene3D G3DSA:3.30.43.10 1 50 3.4E-13 T 14-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 PhaeoP54_01995 4d7b072802220df6c0da9c1dd8e427c5 262 Gene3D G3DSA:3.30.390.50 168 262 5.6E-8 T 14-10-2018 PhaeoP54_01995 4d7b072802220df6c0da9c1dd8e427c5 262 SUPERFAMILY SSF55447 166 261 1.88E-19 T 14-10-2018 IPR036683 CO dehydrogenase flavoprotein, C-terminal domain superfamily PhaeoP54_03441 272e21fb1bf6f6e5dc7665ac8ea3747b 204 SUPERFAMILY SSF52972 8 201 3.66E-63 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like PhaeoP54_03441 272e21fb1bf6f6e5dc7665ac8ea3747b 204 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 10 200 4.3E-47 T 14-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 PhaeoP54_03441 272e21fb1bf6f6e5dc7665ac8ea3747b 204 Hamap MF_01405 dITP/XTP pyrophosphatase. 8 203 46.133 T 14-10-2018 IPR020922 dITP/XTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.66 PhaeoP54_03441 272e21fb1bf6f6e5dc7665ac8ea3747b 204 Pfam PF01725 Ham1 family 10 199 2.6E-52 T 14-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 PhaeoP54_03441 272e21fb1bf6f6e5dc7665ac8ea3747b 204 Gene3D G3DSA:3.90.950.10 6 202 1.0E-64 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like PhaeoP54_00016 6797e557df62ab029b2afabb5ed801fe 451 Gene3D G3DSA:3.40.640.10 64 340 1.2E-154 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PhaeoP54_00016 6797e557df62ab029b2afabb5ed801fe 451 PIRSF PIRSF000521 21 446 1.5E-31 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PhaeoP54_00016 6797e557df62ab029b2afabb5ed801fe 451 SUPERFAMILY SSF53383 9 444 1.46E-119 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PhaeoP54_00016 6797e557df62ab029b2afabb5ed801fe 451 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 251 288 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PhaeoP54_00016 6797e557df62ab029b2afabb5ed801fe 451 Pfam PF00202 Aminotransferase class-III 29 442 2.8E-91 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PhaeoP54_00016 6797e557df62ab029b2afabb5ed801fe 451 Gene3D G3DSA:3.90.1150.10 10 443 1.2E-154 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 PhaeoP54_02704 4fe26c1b613a44f4034fe066951db166 130 SUPERFAMILY SSF51316 1 129 1.67E-35 T 14-10-2018 IPR011057 Mss4-like superfamily PhaeoP54_02704 4fe26c1b613a44f4034fe066951db166 130 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 24 110 1.4E-10 T 14-10-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 PhaeoP54_02704 4fe26c1b613a44f4034fe066951db166 130 Gene3D G3DSA:2.170.150.70 2 111 4.1E-17 T 14-10-2018 PhaeoP54_02079 119681a96567bb186107c2437ec1c1f0 551 PIRSF PIRSF000137 2 539 5.8E-144 T 14-10-2018 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 PhaeoP54_02079 119681a96567bb186107c2437ec1c1f0 551 Pfam PF00732 GMC oxidoreductase 4 295 2.7E-97 T 14-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 PhaeoP54_02079 119681a96567bb186107c2437ec1c1f0 551 TIGRFAM TIGR01810 betA: choline dehydrogenase 4 532 7.2E-251 T 14-10-2018 IPR011533 Oxygen-dependent choline dehydrogenase GO:0008812|GO:0019285 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494 PhaeoP54_02079 119681a96567bb186107c2437ec1c1f0 551 Gene3D G3DSA:1.10.1220.110 94 151 9.2E-181 T 14-10-2018 PhaeoP54_02079 119681a96567bb186107c2437ec1c1f0 551 ProSitePatterns PS00623 GMC oxidoreductases signature 1. 79 102 - T 14-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 PhaeoP54_02079 119681a96567bb186107c2437ec1c1f0 551 SUPERFAMILY SSF54373 290 472 9.22E-62 T 14-10-2018 PhaeoP54_02079 119681a96567bb186107c2437ec1c1f0 551 Pfam PF05199 GMC oxidoreductase 387 524 4.6E-41 T 14-10-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 PhaeoP54_02079 119681a96567bb186107c2437ec1c1f0 551 Gene3D G3DSA:4.10.450.10 35 197 9.2E-181 T 14-10-2018 IPR027424 Glucose Oxidase, domain 2 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494|Reactome: R-HSA-6798163 PhaeoP54_02079 119681a96567bb186107c2437ec1c1f0 551 SUPERFAMILY SSF51905 1 532 2.1E-89 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PhaeoP54_02079 119681a96567bb186107c2437ec1c1f0 551 Gene3D G3DSA:3.50.50.60 3 528 9.2E-181 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PhaeoP54_02079 119681a96567bb186107c2437ec1c1f0 551 Gene3D G3DSA:3.30.410.40 152 469 9.2E-181 T 14-10-2018 PhaeoP54_02079 119681a96567bb186107c2437ec1c1f0 551 ProSitePatterns PS00624 GMC oxidoreductases signature 2. 254 268 - T 14-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 PhaeoP54_03091 65654204adc2fa61bc56d8da554ec1d3 278 Gene3D G3DSA:2.170.230.10 128 210 2.9E-52 T 14-10-2018 PhaeoP54_03091 65654204adc2fa61bc56d8da554ec1d3 278 Gene3D G3DSA:2.10.109.10 29 256 2.9E-52 T 14-10-2018 PhaeoP54_03091 65654204adc2fa61bc56d8da554ec1d3 278 SUPERFAMILY SSF51306 29 275 6.15E-58 T 14-10-2018 IPR036286 LexA/Signal peptidase-like superfamily PhaeoP54_03091 65654204adc2fa61bc56d8da554ec1d3 278 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 15 256 4.8E-43 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 PhaeoP54_03091 65654204adc2fa61bc56d8da554ec1d3 278 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 117 129 4.3E-22 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 PhaeoP54_03091 65654204adc2fa61bc56d8da554ec1d3 278 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 31 47 4.3E-22 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 PhaeoP54_03091 65654204adc2fa61bc56d8da554ec1d3 278 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 211 230 4.3E-22 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 PhaeoP54_03091 65654204adc2fa61bc56d8da554ec1d3 278 ProSitePatterns PS00760 Signal peptidases I lysine active site. 119 131 - T 14-10-2018 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 PhaeoP54_03091 65654204adc2fa61bc56d8da554ec1d3 278 ProSitePatterns PS00761 Signal peptidases I signature 3. 216 229 - T 14-10-2018 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 PhaeoP54_03091 65654204adc2fa61bc56d8da554ec1d3 278 Pfam PF00717 Peptidase S24-like 37 140 5.5E-19 T 14-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C PhaeoP54_01508 bb8289cbafaad0c09e087ed59c43aacd 482 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 6 481 80.808 T 14-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 PhaeoP54_01508 bb8289cbafaad0c09e087ed59c43aacd 482 SUPERFAMILY SSF54631 93 202 2.91E-25 T 14-10-2018 PhaeoP54_01508 bb8289cbafaad0c09e087ed59c43aacd 482 PIRSF PIRSF000130 1 482 5.5E-196 T 14-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 PhaeoP54_01508 bb8289cbafaad0c09e087ed59c43aacd 482 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 292 304 - T 14-10-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 PhaeoP54_01508 bb8289cbafaad0c09e087ed59c43aacd 482 Pfam PF00571 CBS domain 94 139 2.8E-9 T 14-10-2018 IPR000644 CBS domain PhaeoP54_01508 bb8289cbafaad0c09e087ed59c43aacd 482 Pfam PF00571 CBS domain 151 197 1.3E-4 T 14-10-2018 IPR000644 CBS domain PhaeoP54_01508 bb8289cbafaad0c09e087ed59c43aacd 482 Gene3D G3DSA:3.20.20.70 1 481 3.1E-202 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PhaeoP54_01508 bb8289cbafaad0c09e087ed59c43aacd 482 SMART SM01240 5 468 0.0 T 14-10-2018 PhaeoP54_01508 bb8289cbafaad0c09e087ed59c43aacd 482 SUPERFAMILY SSF51412 3 472 1.7E-122 T 14-10-2018 PhaeoP54_01508 bb8289cbafaad0c09e087ed59c43aacd 482 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 6 449 1.7E-180 T 14-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 PhaeoP54_01508 bb8289cbafaad0c09e087ed59c43aacd 482 SMART SM00116 94 142 6.5E-9 T 14-10-2018 IPR000644 CBS domain PhaeoP54_01508 bb8289cbafaad0c09e087ed59c43aacd 482 SMART SM00116 155 203 0.0085 T 14-10-2018 IPR000644 CBS domain PhaeoP54_01508 bb8289cbafaad0c09e087ed59c43aacd 482 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 6 468 8.6E-155 T 14-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 PhaeoP54_02300 53d62668f83a916ba500e1319d801978 96 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 58 4.7E-26 T 14-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PhaeoP54_02300 53d62668f83a916ba500e1319d801978 96 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 68 21.412 T 14-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PhaeoP54_02300 53d62668f83a916ba500e1319d801978 96 Pfam PF00830 Ribosomal L28 family 3 61 1.4E-25 T 14-10-2018 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PhaeoP54_02300 53d62668f83a916ba500e1319d801978 96 SUPERFAMILY SSF143800 1 83 5.1E-30 T 14-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PhaeoP54_02300 53d62668f83a916ba500e1319d801978 96 Gene3D G3DSA:2.30.170.40 2 77 2.2E-28 T 14-10-2018 IPR037147 Ribosomal protein L28/L24 superfamily GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PhaeoP54_00334 bb79dd1b453290558cfa923802c7b697 182 Pfam PF13521 AAA domain 10 171 9.6E-35 T 14-10-2018 IPR038727 NadR/Ttd14, AAA domain PhaeoP54_00334 bb79dd1b453290558cfa923802c7b697 182 SUPERFAMILY SSF52540 8 174 3.1E-11 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_01416 361088df2a5a50e2a51f820fc3a7967d 239 Pfam PF00072 Response regulator receiver domain 3 112 1.2E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PhaeoP54_01416 361088df2a5a50e2a51f820fc3a7967d 239 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 221 9.5E-20 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PhaeoP54_01416 361088df2a5a50e2a51f820fc3a7967d 239 SMART SM00862 145 221 1.2E-19 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PhaeoP54_01416 361088df2a5a50e2a51f820fc3a7967d 239 SMART SM00448 1 112 3.2E-40 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PhaeoP54_01416 361088df2a5a50e2a51f820fc3a7967d 239 Gene3D G3DSA:3.40.50.2300 1 118 2.7E-36 T 14-10-2018 PhaeoP54_01416 361088df2a5a50e2a51f820fc3a7967d 239 SUPERFAMILY SSF52172 1 174 3.56E-40 T 14-10-2018 IPR011006 CheY-like superfamily PhaeoP54_01416 361088df2a5a50e2a51f820fc3a7967d 239 Gene3D G3DSA:1.10.10.10 119 230 7.4E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_04015 e0f4bb8607aadff4f018fb3d4cfa9188 485 SUPERFAMILY SSF53335 313 484 2.37E-28 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PhaeoP54_04015 e0f4bb8607aadff4f018fb3d4cfa9188 485 Pfam PF13708 Domain of unknown function (DUF4942) 100 283 1.7E-36 T 14-10-2018 IPR031339 Domain of unknown function DUF4942 PhaeoP54_04015 e0f4bb8607aadff4f018fb3d4cfa9188 485 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 311 327 7.3E-8 T 14-10-2018 PhaeoP54_04015 e0f4bb8607aadff4f018fb3d4cfa9188 485 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 393 405 7.3E-8 T 14-10-2018 PhaeoP54_04015 e0f4bb8607aadff4f018fb3d4cfa9188 485 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 335 349 7.3E-8 T 14-10-2018 PhaeoP54_04015 e0f4bb8607aadff4f018fb3d4cfa9188 485 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 405 429 7.3E-8 T 14-10-2018 PhaeoP54_04015 e0f4bb8607aadff4f018fb3d4cfa9188 485 Gene3D G3DSA:3.40.50.150 314 485 6.2E-22 T 14-10-2018 PhaeoP54_04015 e0f4bb8607aadff4f018fb3d4cfa9188 485 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 396 402 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 PhaeoP54_04015 e0f4bb8607aadff4f018fb3d4cfa9188 485 Pfam PF05175 Methyltransferase small domain 322 429 9.9E-7 T 14-10-2018 IPR007848 Methyltransferase small domain GO:0008168 PhaeoP54_04015 e0f4bb8607aadff4f018fb3d4cfa9188 485 SMART SM00650 319 445 0.0019 T 14-10-2018 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 PhaeoP54_01285 af43f2503f9d9a5a3253f96de590e941 439 Gene3D G3DSA:3.30.565.10 295 439 2.8E-24 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PhaeoP54_01285 af43f2503f9d9a5a3253f96de590e941 439 SMART SM00388 234 291 8.1E-11 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PhaeoP54_01285 af43f2503f9d9a5a3253f96de590e941 439 Gene3D G3DSA:1.10.287.130 179 286 1.1E-19 T 14-10-2018 PhaeoP54_01285 af43f2503f9d9a5a3253f96de590e941 439 PRINTS PR00344 Bacterial sensor protein C-terminal signature 364 378 1.6E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PhaeoP54_01285 af43f2503f9d9a5a3253f96de590e941 439 PRINTS PR00344 Bacterial sensor protein C-terminal signature 400 418 1.6E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PhaeoP54_01285 af43f2503f9d9a5a3253f96de590e941 439 SUPERFAMILY SSF47384 220 287 4.9E-13 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 PhaeoP54_01285 af43f2503f9d9a5a3253f96de590e941 439 SMART SM00304 182 233 1.7E-4 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 PhaeoP54_01285 af43f2503f9d9a5a3253f96de590e941 439 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 334 426 3.9E-15 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PhaeoP54_01285 af43f2503f9d9a5a3253f96de590e941 439 SMART SM00387 330 437 8.7E-19 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PhaeoP54_01285 af43f2503f9d9a5a3253f96de590e941 439 SUPERFAMILY SSF55874 293 426 3.41E-24 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PhaeoP54_01285 af43f2503f9d9a5a3253f96de590e941 439 Pfam PF00512 His Kinase A (phospho-acceptor) domain 235 287 4.1E-8 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PhaeoP54_01285 af43f2503f9d9a5a3253f96de590e941 439 Pfam PF00672 HAMP domain 182 230 5.6E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 PhaeoP54_02340 484f19d6ab7ff59d3ef10c7a16155392 383 Gene3D G3DSA:3.60.120.10 26 375 3.7E-110 T 14-10-2018 IPR005801 ADC synthase GO:0009058 PhaeoP54_02340 484f19d6ab7ff59d3ef10c7a16155392 383 TIGRFAM TIGR00553 pabB: aminodeoxychorismate synthase, component I 48 370 4.7E-116 T 14-10-2018 IPR005802 Para-aminobenzoate synthase, component I GO:0009396 KEGG: 00790+2.6.1.85|MetaCyc: PWY-6543 PhaeoP54_02340 484f19d6ab7ff59d3ef10c7a16155392 383 PRINTS PR00095 Anthranilate synthase component I signature 324 338 4.6E-11 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 PhaeoP54_02340 484f19d6ab7ff59d3ef10c7a16155392 383 PRINTS PR00095 Anthranilate synthase component I signature 215 228 4.6E-11 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 PhaeoP54_02340 484f19d6ab7ff59d3ef10c7a16155392 383 PRINTS PR00095 Anthranilate synthase component I signature 309 323 4.6E-11 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 PhaeoP54_02340 484f19d6ab7ff59d3ef10c7a16155392 383 PRINTS PR00095 Anthranilate synthase component I signature 229 242 4.6E-11 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 PhaeoP54_02340 484f19d6ab7ff59d3ef10c7a16155392 383 SUPERFAMILY SSF56322 28 370 4.84E-108 T 14-10-2018 IPR005801 ADC synthase GO:0009058 PhaeoP54_02340 484f19d6ab7ff59d3ef10c7a16155392 383 Pfam PF00425 chorismate binding enzyme 113 367 1.5E-87 T 14-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal PhaeoP54_02710 2962e4026cad90478e2294f8790b9fb0 400 SUPERFAMILY SSF53067 91 381 4.57E-37 T 14-10-2018 PhaeoP54_02710 2962e4026cad90478e2294f8790b9fb0 400 Gene3D G3DSA:3.30.420.40 201 383 1.5E-27 T 14-10-2018 PhaeoP54_02710 2962e4026cad90478e2294f8790b9fb0 400 SUPERFAMILY SSF46785 21 85 2.35E-12 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_02710 2962e4026cad90478e2294f8790b9fb0 400 Pfam PF00480 ROK family 92 380 5.2E-17 T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 PhaeoP54_02710 2962e4026cad90478e2294f8790b9fb0 400 Gene3D G3DSA:1.10.10.10 10 85 1.2E-13 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_02710 2962e4026cad90478e2294f8790b9fb0 400 Gene3D G3DSA:3.30.420.40 90 200 9.9E-7 T 14-10-2018 PhaeoP54_02710 2962e4026cad90478e2294f8790b9fb0 400 Pfam PF13412 Winged helix-turn-helix DNA-binding 23 65 7.7E-10 T 14-10-2018 PhaeoP54_00919 16fbf752a5ee9c406050069a9c35ed18 335 SUPERFAMILY SSF53335 11 307 5.86E-43 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PhaeoP54_00919 16fbf752a5ee9c406050069a9c35ed18 335 PIRSF PIRSF004486 7 309 1.4E-93 T 14-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 PhaeoP54_00919 16fbf752a5ee9c406050069a9c35ed18 335 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 11 306 1.5E-82 T 14-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 PhaeoP54_00919 16fbf752a5ee9c406050069a9c35ed18 335 Gene3D G3DSA:3.40.50.150 12 304 5.0E-90 T 14-10-2018 PhaeoP54_00919 16fbf752a5ee9c406050069a9c35ed18 335 SUPERFAMILY SSF81799 113 212 1.14E-34 T 14-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 PhaeoP54_00919 16fbf752a5ee9c406050069a9c35ed18 335 Gene3D G3DSA:1.10.150.170 111 213 5.0E-90 T 14-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 PhaeoP54_00919 16fbf752a5ee9c406050069a9c35ed18 335 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 12 308 35.438 T 14-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 PhaeoP54_00919 16fbf752a5ee9c406050069a9c35ed18 335 Pfam PF01795 MraW methylase family 11 306 9.2E-89 T 14-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 PhaeoP54_00332 0b537b5efd6b84ee9e9aa9426e831868 294 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 4 290 2.9E-140 T 14-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 PhaeoP54_00332 0b537b5efd6b84ee9e9aa9426e831868 294 Pfam PF00549 CoA-ligase 151 275 6.8E-19 T 14-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 PhaeoP54_00332 0b537b5efd6b84ee9e9aa9426e831868 294 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 152 181 - T 14-10-2018 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site PhaeoP54_00332 0b537b5efd6b84ee9e9aa9426e831868 294 Hamap MF_01988 Succinate--CoA ligase [ADP-forming] subunit alpha [sucD]. 1 292 42.28 T 14-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 PhaeoP54_00332 0b537b5efd6b84ee9e9aa9426e831868 294 SUPERFAMILY SSF51735 1 122 1.22E-43 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PhaeoP54_00332 0b537b5efd6b84ee9e9aa9426e831868 294 SUPERFAMILY SSF52210 123 290 2.49E-53 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 PhaeoP54_00332 0b537b5efd6b84ee9e9aa9426e831868 294 PRINTS PR01798 Succinyl-CoA synthase signature 82 99 9.8E-40 T 14-10-2018 PhaeoP54_00332 0b537b5efd6b84ee9e9aa9426e831868 294 PRINTS PR01798 Succinyl-CoA synthase signature 208 221 9.8E-40 T 14-10-2018 PhaeoP54_00332 0b537b5efd6b84ee9e9aa9426e831868 294 PRINTS PR01798 Succinyl-CoA synthase signature 244 261 9.8E-40 T 14-10-2018 PhaeoP54_00332 0b537b5efd6b84ee9e9aa9426e831868 294 PRINTS PR01798 Succinyl-CoA synthase signature 177 195 9.8E-40 T 14-10-2018 PhaeoP54_00332 0b537b5efd6b84ee9e9aa9426e831868 294 Gene3D G3DSA:3.40.50.261 124 292 1.3E-70 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 PhaeoP54_00332 0b537b5efd6b84ee9e9aa9426e831868 294 Gene3D G3DSA:3.40.50.720 2 123 1.3E-52 T 14-10-2018 PhaeoP54_00332 0b537b5efd6b84ee9e9aa9426e831868 294 PIRSF PIRSF001553 1 294 6.1E-131 T 14-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 PhaeoP54_00332 0b537b5efd6b84ee9e9aa9426e831868 294 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 240 253 - T 14-10-2018 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site PhaeoP54_00332 0b537b5efd6b84ee9e9aa9426e831868 294 Pfam PF02629 CoA binding domain 6 99 2.5E-31 T 14-10-2018 IPR003781 CoA-binding GO:0048037 PhaeoP54_00332 0b537b5efd6b84ee9e9aa9426e831868 294 SMART SM00881 4 100 1.8E-34 T 14-10-2018 IPR003781 CoA-binding GO:0048037 PhaeoP54_01664 a555b7567c21da66d8bc82727ae4f7df 201 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 22 98 3.7E-17 T 14-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 PhaeoP54_01664 a555b7567c21da66d8bc82727ae4f7df 201 Pfam PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 159 201 1.3E-17 T 14-10-2018 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 PhaeoP54_01664 a555b7567c21da66d8bc82727ae4f7df 201 TIGRFAM TIGR00558 pdxH: pyridoxamine 5'-phosphate oxidase 11 201 6.4E-60 T 14-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 PhaeoP54_01664 a555b7567c21da66d8bc82727ae4f7df 201 SUPERFAMILY SSF50475 11 201 8.48E-58 T 14-10-2018 PhaeoP54_01664 a555b7567c21da66d8bc82727ae4f7df 201 ProSitePatterns PS01064 Pyridoxamine 5'-phosphate oxidase signature. 169 182 - T 14-10-2018 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 PhaeoP54_01664 a555b7567c21da66d8bc82727ae4f7df 201 Hamap MF_01629 Pyridoxine/pyridoxamine 5'-phosphate oxidase [pdxH]. 1 201 32.942 T 14-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 PhaeoP54_01664 a555b7567c21da66d8bc82727ae4f7df 201 PIRSF PIRSF000190 5 201 6.2E-58 T 14-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 PhaeoP54_01664 a555b7567c21da66d8bc82727ae4f7df 201 Gene3D G3DSA:2.30.110.10 7 201 1.5E-64 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 PhaeoP54_00629 99451608faccabcf776c2d2617104d18 340 Hamap MF_00435 Ketol-acid reductoisomerase (NADP(+)) [ilvC]. 1 330 43.671 T 14-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 PhaeoP54_00629 99451608faccabcf776c2d2617104d18 340 SUPERFAMILY SSF48179 184 334 5.61E-70 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 PhaeoP54_00629 99451608faccabcf776c2d2617104d18 340 PIRSF PIRSF000116 4 207 3.2E-38 T 14-10-2018 IPR014359 Ketol-acid reductoisomerase, prokaryotic GO:0004455|GO:0009082|GO:0050661|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 PhaeoP54_00629 99451608faccabcf776c2d2617104d18 340 PIRSF PIRSF000116 202 333 6.3E-15 T 14-10-2018 IPR014359 Ketol-acid reductoisomerase, prokaryotic GO:0004455|GO:0009082|GO:0050661|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 PhaeoP54_00629 99451608faccabcf776c2d2617104d18 340 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 14 178 8.4E-69 T 14-10-2018 IPR013116 Ketol-acid reductoisomerase, N-terminal KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 PhaeoP54_00629 99451608faccabcf776c2d2617104d18 340 SUPERFAMILY SSF51735 1 183 2.48E-70 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PhaeoP54_00629 99451608faccabcf776c2d2617104d18 340 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 14 328 3.6E-123 T 14-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 PhaeoP54_00629 99451608faccabcf776c2d2617104d18 340 Gene3D G3DSA:3.40.50.720 1 182 3.1E-71 T 14-10-2018 PhaeoP54_00629 99451608faccabcf776c2d2617104d18 340 Gene3D G3DSA:1.10.3730.40 183 340 4.6E-72 T 14-10-2018 PhaeoP54_00629 99451608faccabcf776c2d2617104d18 340 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 184 328 1.2E-62 T 14-10-2018 IPR000506 Ketol-acid reductoisomerase, C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 PhaeoP54_01630 4ebda992e0388f9c8e4b3734a463988d 543 Pfam PF00682 HMGL-like 6 256 7.4E-42 T 14-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 PhaeoP54_01630 4ebda992e0388f9c8e4b3734a463988d 543 Gene3D G3DSA:3.30.160.270 386 530 3.8E-5 T 14-10-2018 PhaeoP54_01630 4ebda992e0388f9c8e4b3734a463988d 543 SMART SM00917 380 532 5.3E-28 T 14-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 PhaeoP54_01630 4ebda992e0388f9c8e4b3734a463988d 543 SUPERFAMILY SSF51569 3 298 4.03E-76 T 14-10-2018 PhaeoP54_01630 4ebda992e0388f9c8e4b3734a463988d 543 Gene3D G3DSA:3.20.20.70 5 331 6.0E-104 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PhaeoP54_01630 4ebda992e0388f9c8e4b3734a463988d 543 TIGRFAM TIGR00977 citramal_synth: citramalate synthase 6 537 6.3E-181 T 14-10-2018 IPR005675 Citramalate synthase GO:0019752|GO:0046912 KEGG: 00290+2.3.1.182|KEGG: 00660+2.3.1.182|MetaCyc: PWY-5101 PhaeoP54_01630 4ebda992e0388f9c8e4b3734a463988d 543 Pfam PF08502 LeuA allosteric (dimerisation) domain 382 529 5.2E-22 T 14-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 PhaeoP54_01630 4ebda992e0388f9c8e4b3734a463988d 543 SUPERFAMILY SSF110921 427 528 6.28E-15 T 14-10-2018 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 PhaeoP54_01630 4ebda992e0388f9c8e4b3734a463988d 543 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 13 29 - T 14-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 PhaeoP54_01008 2a1bfbfd2d03c80938d6a887b5dd02df 177 Hamap MF_01356 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic [ndhK]. 19 170 39.41 T 14-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PhaeoP54_01008 2a1bfbfd2d03c80938d6a887b5dd02df 177 SUPERFAMILY SSF56770 28 172 2.22E-67 T 14-10-2018 PhaeoP54_01008 2a1bfbfd2d03c80938d6a887b5dd02df 177 TIGRFAM TIGR01957 nuoB_fam: NADH-quinone oxidoreductase, B subunit 30 171 3.7E-74 T 14-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PhaeoP54_01008 2a1bfbfd2d03c80938d6a887b5dd02df 177 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 56 165 2.4E-24 T 14-10-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PhaeoP54_01008 2a1bfbfd2d03c80938d6a887b5dd02df 177 Gene3D G3DSA:3.40.50.12280 13 176 1.2E-78 T 14-10-2018 PhaeoP54_01008 2a1bfbfd2d03c80938d6a887b5dd02df 177 ProSitePatterns PS01150 Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. 137 153 - T 14-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PhaeoP54_01324 e00d336a92030153cc77d8d6b8c4ed37 445 SUPERFAMILY SSF46689 387 438 2.33E-7 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PhaeoP54_01324 e00d336a92030153cc77d8d6b8c4ed37 445 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 170 183 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 PhaeoP54_01324 e00d336a92030153cc77d8d6b8c4ed37 445 Pfam PF00158 Sigma-54 interaction domain 146 298 7.7E-26 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 PhaeoP54_01324 e00d336a92030153cc77d8d6b8c4ed37 445 SMART SM00382 166 299 3.2E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_01324 e00d336a92030153cc77d8d6b8c4ed37 445 Gene3D G3DSA:1.10.8.60 303 367 1.3E-15 T 14-10-2018 PhaeoP54_01324 e00d336a92030153cc77d8d6b8c4ed37 445 SMART SM00448 5 119 9.6E-35 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PhaeoP54_01324 e00d336a92030153cc77d8d6b8c4ed37 445 Gene3D G3DSA:3.40.50.2300 1 138 4.4E-38 T 14-10-2018 PhaeoP54_01324 e00d336a92030153cc77d8d6b8c4ed37 445 SUPERFAMILY SSF52540 146 367 1.99E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_01324 e00d336a92030153cc77d8d6b8c4ed37 445 Gene3D G3DSA:1.10.10.60 384 441 1.8E-9 T 14-10-2018 PhaeoP54_01324 e00d336a92030153cc77d8d6b8c4ed37 445 SUPERFAMILY SSF52172 5 189 2.56E-41 T 14-10-2018 IPR011006 CheY-like superfamily PhaeoP54_01324 e00d336a92030153cc77d8d6b8c4ed37 445 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 345 354 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site PhaeoP54_01324 e00d336a92030153cc77d8d6b8c4ed37 445 Pfam PF00072 Response regulator receiver domain 7 114 6.1E-30 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PhaeoP54_01324 e00d336a92030153cc77d8d6b8c4ed37 445 Gene3D G3DSA:3.40.50.300 144 302 2.8E-37 T 14-10-2018 PhaeoP54_01324 e00d336a92030153cc77d8d6b8c4ed37 445 Pfam PF02954 Bacterial regulatory protein, Fis family 396 436 3.5E-7 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PhaeoP54_01000 52fa8fac8dab7513319f4938c6163054 516 Pfam PF13193 AMP-binding enzyme C-terminal domain 426 501 3.7E-22 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain PhaeoP54_01000 52fa8fac8dab7513319f4938c6163054 516 SUPERFAMILY SSF56801 14 513 3.01E-128 T 14-10-2018 PhaeoP54_01000 52fa8fac8dab7513319f4938c6163054 516 Gene3D G3DSA:3.40.50.12780 19 413 4.6E-91 T 14-10-2018 PhaeoP54_01000 52fa8fac8dab7513319f4938c6163054 516 Gene3D G3DSA:3.30.300.30 414 516 3.9E-30 T 14-10-2018 PhaeoP54_01000 52fa8fac8dab7513319f4938c6163054 516 ProSitePatterns PS00455 Putative AMP-binding domain signature. 173 184 - T 14-10-2018 IPR020845 AMP-binding, conserved site PhaeoP54_01000 52fa8fac8dab7513319f4938c6163054 516 Pfam PF00501 AMP-binding enzyme 30 416 8.3E-70 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 PhaeoP54_02064 8640112905c0b0d92d592b9fbcec0355 707 Pfam PF01642 Methylmalonyl-CoA mutase 28 539 1.8E-242 T 14-10-2018 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic GO:0016866|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 PhaeoP54_02064 8640112905c0b0d92d592b9fbcec0355 707 SUPERFAMILY SSF52242 546 706 1.03E-56 T 14-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 PhaeoP54_02064 8640112905c0b0d92d592b9fbcec0355 707 Gene3D G3DSA:3.40.50.280 546 707 5.2E-53 T 14-10-2018 PhaeoP54_02064 8640112905c0b0d92d592b9fbcec0355 707 TIGRFAM TIGR00640 acid_CoA_mut_C: methylmalonyl-CoA mutase C-terminal domain 578 706 1.3E-59 T 14-10-2018 IPR006159 Methylmalonyl-CoA mutase, C-terminal GO:0016853 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 PhaeoP54_02064 8640112905c0b0d92d592b9fbcec0355 707 Pfam PF02310 B12 binding domain 581 695 1.6E-15 T 14-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 PhaeoP54_02064 8640112905c0b0d92d592b9fbcec0355 707 Gene3D G3DSA:3.20.20.240 26 541 1.3E-244 T 14-10-2018 PhaeoP54_02064 8640112905c0b0d92d592b9fbcec0355 707 SUPERFAMILY SSF51703 4 541 7.65E-230 T 14-10-2018 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic GO:0003824|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 PhaeoP54_02064 8640112905c0b0d92d592b9fbcec0355 707 ProSitePatterns PS00544 Methylmalonyl-CoA mutase signature. 369 394 - T 14-10-2018 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic GO:0016866|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 PhaeoP54_02064 8640112905c0b0d92d592b9fbcec0355 707 TIGRFAM TIGR00641 acid_CoA_mut_N: methylmalonyl-CoA mutase N-terminal domain 26 546 1.3E-264 T 14-10-2018 IPR006098 Methylmalonyl-CoA mutase, alpha chain, catalytic GO:0004494|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 PhaeoP54_03303 178fddb3581e68b2cd075abcb5ce9684 231 Pfam PF00005 ABC transporter 17 160 1.4E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PhaeoP54_03303 178fddb3581e68b2cd075abcb5ce9684 231 SUPERFAMILY SSF52540 2 221 5.54E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_03303 178fddb3581e68b2cd075abcb5ce9684 231 SMART SM00382 26 209 5.9E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_03303 178fddb3581e68b2cd075abcb5ce9684 231 Gene3D G3DSA:3.40.50.300 1 227 1.3E-57 T 14-10-2018 PhaeoP54_03303 178fddb3581e68b2cd075abcb5ce9684 231 TIGRFAM TIGR03410 urea_trans_UrtE: urea ABC transporter, ATP-binding protein UrtE 2 230 1.7E-100 T 14-10-2018 IPR017780 ABC transporter, urea, ATP-binding protein, UrtE PhaeoP54_00618 634feaf1e80b8155646709845967c9f4 309 Gene3D G3DSA:3.30.930.10 2 217 7.1E-103 T 14-10-2018 PhaeoP54_00618 634feaf1e80b8155646709845967c9f4 309 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 11 302 4.1E-142 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 PhaeoP54_00618 634feaf1e80b8155646709845967c9f4 309 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 115 139 5.6E-55 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 PhaeoP54_00618 634feaf1e80b8155646709845967c9f4 309 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 141 161 5.6E-55 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 PhaeoP54_00618 634feaf1e80b8155646709845967c9f4 309 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 63 78 5.6E-55 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 PhaeoP54_00618 634feaf1e80b8155646709845967c9f4 309 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 84 104 5.6E-55 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 PhaeoP54_00618 634feaf1e80b8155646709845967c9f4 309 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 164 179 5.6E-55 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 PhaeoP54_00618 634feaf1e80b8155646709845967c9f4 309 SUPERFAMILY SSF55681 10 303 6.63E-123 T 14-10-2018 PhaeoP54_00618 634feaf1e80b8155646709845967c9f4 309 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 10 303 7.6E-136 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 PhaeoP54_00618 634feaf1e80b8155646709845967c9f4 309 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 9 305 57.149 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 PhaeoP54_00618 634feaf1e80b8155646709845967c9f4 309 Gene3D G3DSA:1.20.58.180 218 305 2.4E-31 T 14-10-2018 PhaeoP54_02553 975e2cb6ca46d279cccf82ab6f2448be 379 Hamap MF_02079 Peptidoglycan glycosyltransferase MrdB [mrdB]. 16 379 26.314 T 14-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 PhaeoP54_02553 975e2cb6ca46d279cccf82ab6f2448be 379 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 22 377 2.5E-126 T 14-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 PhaeoP54_02553 975e2cb6ca46d279cccf82ab6f2448be 379 Pfam PF01098 Cell cycle protein 27 375 2.6E-97 T 14-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 PhaeoP54_03548 36d4543097a74605355c9898befbff8b 1510 Gene3D G3DSA:2.160.20.60 1236 1507 8.0E-105 T 14-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 PhaeoP54_03548 36d4543097a74605355c9898befbff8b 1510 SUPERFAMILY SSF51395 458 1219 5.5E-246 T 14-10-2018 PhaeoP54_03548 36d4543097a74605355c9898befbff8b 1510 SUPERFAMILY SSF56235 34 456 1.93E-145 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal PhaeoP54_03548 36d4543097a74605355c9898befbff8b 1510 Pfam PF01493 GXGXG motif 1263 1449 2.2E-72 T 14-10-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0016491|GO:0055114 PhaeoP54_03548 36d4543097a74605355c9898befbff8b 1510 Gene3D G3DSA:3.60.20.10 34 456 2.3E-163 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal PhaeoP54_03548 36d4543097a74605355c9898befbff8b 1510 Pfam PF00310 Glutamine amidotransferases class-II 34 454 1.3E-159 T 14-10-2018 IPR017932 Glutamine amidotransferase type 2 domain PhaeoP54_03548 36d4543097a74605355c9898befbff8b 1510 Gene3D G3DSA:3.20.20.70 457 805 3.5E-113 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PhaeoP54_03548 36d4543097a74605355c9898befbff8b 1510 Gene3D G3DSA:3.20.20.70 806 1235 4.7E-181 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PhaeoP54_03548 36d4543097a74605355c9898befbff8b 1510 Pfam PF04898 Glutamate synthase central domain 482 760 1.8E-93 T 14-10-2018 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 PhaeoP54_03548 36d4543097a74605355c9898befbff8b 1510 Pfam PF01645 Conserved region in glutamate synthase 820 1184 4.7E-151 T 14-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 PhaeoP54_03548 36d4543097a74605355c9898befbff8b 1510 SUPERFAMILY SSF69336 1236 1496 5.23E-87 T 14-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 PhaeoP54_00783 ca75e923ca1c911bf10e9c1102fbbdbe 392 Gene3D G3DSA:3.90.480.10 31 95 3.3E-22 T 14-10-2018 PhaeoP54_00783 ca75e923ca1c911bf10e9c1102fbbdbe 392 SUPERFAMILY SSF55124 8 91 9.3E-23 T 14-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 PhaeoP54_00783 ca75e923ca1c911bf10e9c1102fbbdbe 392 SUPERFAMILY SSF56014 297 372 6.28E-13 T 14-10-2018 PhaeoP54_00783 ca75e923ca1c911bf10e9c1102fbbdbe 392 Gene3D G3DSA:3.30.413.10 96 157 3.3E-22 T 14-10-2018 PhaeoP54_00783 ca75e923ca1c911bf10e9c1102fbbdbe 392 TIGRFAM TIGR02435 CobG: precorrin-3B synthase 14 355 7.8E-80 T 14-10-2018 IPR012798 Cobalamin (vitamin B12) biosynthesis CobG-like PhaeoP54_00783 ca75e923ca1c911bf10e9c1102fbbdbe 392 Gene3D G3DSA:3.30.413.10 295 388 6.1E-11 T 14-10-2018 PhaeoP54_00783 ca75e923ca1c911bf10e9c1102fbbdbe 392 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 23 86 1.9E-17 T 14-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 PhaeoP54_00783 ca75e923ca1c911bf10e9c1102fbbdbe 392 SUPERFAMILY SSF55124 182 280 5.72E-6 T 14-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 PhaeoP54_01763 db893cdbdba28078304d0504293d699d 271 Gene3D G3DSA:1.10.3130.10 2 147 6.7E-50 T 14-10-2018 PhaeoP54_01763 db893cdbdba28078304d0504293d699d 271 Pfam PF06426 Serine acetyltransferase, N-terminal 14 118 1.6E-36 T 14-10-2018 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 PhaeoP54_01763 db893cdbdba28078304d0504293d699d 271 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 198 231 8.9E-9 T 14-10-2018 IPR001451 Hexapeptide repeat PhaeoP54_01763 db893cdbdba28078304d0504293d699d 271 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 88 247 2.0E-68 T 14-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 PhaeoP54_01763 db893cdbdba28078304d0504293d699d 271 Gene3D G3DSA:2.160.10.10 148 267 1.3E-35 T 14-10-2018 PhaeoP54_01763 db893cdbdba28078304d0504293d699d 271 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 207 235 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 PhaeoP54_01763 db893cdbdba28078304d0504293d699d 271 SMART SM00971 14 118 9.0E-55 T 14-10-2018 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 PhaeoP54_01763 db893cdbdba28078304d0504293d699d 271 SUPERFAMILY SSF51161 12 264 4.85E-65 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily PhaeoP54_01763 db893cdbdba28078304d0504293d699d 271 PIRSF PIRSF000441 14 73 250.0 T 14-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 PhaeoP54_01763 db893cdbdba28078304d0504293d699d 271 PIRSF PIRSF000441 81 265 7.7E-60 T 14-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 PhaeoP54_02775 d4baa3431e9354a7b313caf16aa6529b 465 Gene3D G3DSA:3.90.1150.10 17 460 1.8E-137 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 PhaeoP54_02775 d4baa3431e9354a7b313caf16aa6529b 465 SUPERFAMILY SSF53383 12 463 3.97E-111 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PhaeoP54_02775 d4baa3431e9354a7b313caf16aa6529b 465 Gene3D G3DSA:3.40.640.10 72 352 1.8E-137 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PhaeoP54_02775 d4baa3431e9354a7b313caf16aa6529b 465 Pfam PF00202 Aminotransferase class-III 36 458 3.5E-90 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PhaeoP54_02775 d4baa3431e9354a7b313caf16aa6529b 465 PIRSF PIRSF000521 39 463 2.1E-32 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PhaeoP54_02775 d4baa3431e9354a7b313caf16aa6529b 465 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 261 298 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PhaeoP54_01810 ba717ce9f579870e27aba8b3eaa1e7c6 252 Pfam PF11927 Protein of unknown function (DUF3445) 21 239 4.8E-50 T 14-10-2018 IPR021848 Protein of unknown function DUF3445 PhaeoP54_03289 513df63a63c6f8078c877dce5c30db69 223 SUPERFAMILY SSF52833 54 218 9.35E-40 T 14-10-2018 IPR036249 Thioredoxin-like superfamily PhaeoP54_03289 513df63a63c6f8078c877dce5c30db69 223 Pfam PF13462 Thioredoxin 52 219 2.3E-52 T 14-10-2018 IPR012336 Thioredoxin-like fold PhaeoP54_03289 513df63a63c6f8078c877dce5c30db69 223 Gene3D G3DSA:3.40.30.10 38 222 4.7E-46 T 14-10-2018 PhaeoP54_02803 d9907f8fdb8eb0d17fa8361b48802f15 162 Gene3D G3DSA:1.10.10.10 1 161 1.2E-38 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_02803 d9907f8fdb8eb0d17fa8361b48802f15 162 SMART SM00347 42 145 2.3E-25 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PhaeoP54_02803 d9907f8fdb8eb0d17fa8361b48802f15 162 Pfam PF12802 MarR family 48 109 9.2E-13 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PhaeoP54_02803 d9907f8fdb8eb0d17fa8361b48802f15 162 SUPERFAMILY SSF46785 8 158 1.1E-34 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_02803 d9907f8fdb8eb0d17fa8361b48802f15 162 PRINTS PR00598 Bacterial regulatory protein MarR family signature 69 85 4.6E-11 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PhaeoP54_02803 d9907f8fdb8eb0d17fa8361b48802f15 162 PRINTS PR00598 Bacterial regulatory protein MarR family signature 135 155 4.6E-11 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PhaeoP54_02803 d9907f8fdb8eb0d17fa8361b48802f15 162 PRINTS PR00598 Bacterial regulatory protein MarR family signature 86 101 4.6E-11 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PhaeoP54_02803 d9907f8fdb8eb0d17fa8361b48802f15 162 PRINTS PR00598 Bacterial regulatory protein MarR family signature 105 121 4.6E-11 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PhaeoP54_00505 3b16c0cd5311ac12916cf25ec5ec6433 1544 SUPERFAMILY SSF56801 1144 1448 4.84E-82 T 14-10-2018 PhaeoP54_00505 3b16c0cd5311ac12916cf25ec5ec6433 1544 Pfam PF00550 Phosphopantetheine attachment site 1438 1502 2.7E-10 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain PhaeoP54_00505 3b16c0cd5311ac12916cf25ec5ec6433 1544 Pfam PF00296 Luciferase-like monooxygenase 793 1103 3.8E-42 T 14-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 PhaeoP54_00505 3b16c0cd5311ac12916cf25ec5ec6433 1544 Gene3D G3DSA:3.40.50.12230 5 297 1.5E-54 T 14-10-2018 PhaeoP54_00505 3b16c0cd5311ac12916cf25ec5ec6433 1544 Pfam PF13193 AMP-binding enzyme C-terminal domain 1336 1408 1.4E-8 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain PhaeoP54_00505 3b16c0cd5311ac12916cf25ec5ec6433 1544 PRINTS PR00154 AMP-binding signature 684 695 7.0E-5 T 14-10-2018 IPR020459 AMP-binding PhaeoP54_00505 3b16c0cd5311ac12916cf25ec5ec6433 1544 PRINTS PR00154 AMP-binding signature 696 704 7.0E-5 T 14-10-2018 IPR020459 AMP-binding PhaeoP54_00505 3b16c0cd5311ac12916cf25ec5ec6433 1544 Gene3D G3DSA:3.20.20.30 776 1124 3.9E-91 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 PhaeoP54_00505 3b16c0cd5311ac12916cf25ec5ec6433 1544 TIGRFAM TIGR04020 seco_metab_LLM: natural product biosynthesis luciferase-like monooxygenase domain 778 1128 4.7E-142 T 14-10-2018 IPR024011 Natural product biosynthesis luciferase-like monooxygenase domain PhaeoP54_00505 3b16c0cd5311ac12916cf25ec5ec6433 1544 SUPERFAMILY SSF47336 1436 1502 6.05E-15 T 14-10-2018 IPR036736 ACP-like superfamily PhaeoP54_00505 3b16c0cd5311ac12916cf25ec5ec6433 1544 ProSitePatterns PS00455 Putative AMP-binding domain signature. 689 700 - T 14-10-2018 IPR020845 AMP-binding, conserved site PhaeoP54_00505 3b16c0cd5311ac12916cf25ec5ec6433 1544 Gene3D G3DSA:3.40.50.12780 1125 1322 1.1E-49 T 14-10-2018 PhaeoP54_00505 3b16c0cd5311ac12916cf25ec5ec6433 1544 Gene3D G3DSA:1.10.1200.10 1424 1507 1.3E-18 T 14-10-2018 IPR036736 ACP-like superfamily PhaeoP54_00505 3b16c0cd5311ac12916cf25ec5ec6433 1544 Gene3D G3DSA:3.30.300.30 1323 1423 7.0E-30 T 14-10-2018 PhaeoP54_00505 3b16c0cd5311ac12916cf25ec5ec6433 1544 Pfam PF02911 Formyl transferase, C-terminal domain 193 288 3.7E-8 T 14-10-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 PhaeoP54_00505 3b16c0cd5311ac12916cf25ec5ec6433 1544 SUPERFAMILY SSF51679 777 1128 1.7E-70 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 PhaeoP54_00505 3b16c0cd5311ac12916cf25ec5ec6433 1544 Pfam PF00551 Formyl transferase 70 152 5.2E-15 T 14-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 PhaeoP54_00505 3b16c0cd5311ac12916cf25ec5ec6433 1544 Gene3D G3DSA:3.30.559.30 313 534 2.0E-6 T 14-10-2018 PhaeoP54_00505 3b16c0cd5311ac12916cf25ec5ec6433 1544 SUPERFAMILY SSF56801 512 758 4.84E-66 T 14-10-2018 PhaeoP54_00505 3b16c0cd5311ac12916cf25ec5ec6433 1544 Gene3D G3DSA:3.40.50.12780 538 767 9.7E-73 T 14-10-2018 PhaeoP54_00505 3b16c0cd5311ac12916cf25ec5ec6433 1544 SUPERFAMILY SSF53328 6 185 7.85E-38 T 14-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 PhaeoP54_00505 3b16c0cd5311ac12916cf25ec5ec6433 1544 Pfam PF00501 AMP-binding enzyme 1130 1328 5.1E-47 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 PhaeoP54_00505 3b16c0cd5311ac12916cf25ec5ec6433 1544 Pfam PF00501 AMP-binding enzyme 548 762 4.1E-54 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 PhaeoP54_00505 3b16c0cd5311ac12916cf25ec5ec6433 1544 SUPERFAMILY SSF50486 192 290 3.34E-10 T 14-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 PhaeoP54_00505 3b16c0cd5311ac12916cf25ec5ec6433 1544 SMART SM00823 Phosphopantetheine attachment site 1436 1506 0.0027 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 PhaeoP54_03905 127748b3219759028e24fd72a3dcb151 663 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 30 242 1.7E-33 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PhaeoP54_03905 127748b3219759028e24fd72a3dcb151 663 Pfam PF00512 His Kinase A (phospho-acceptor) domain 432 501 2.6E-6 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PhaeoP54_03905 127748b3219759028e24fd72a3dcb151 663 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 545 648 1.3E-20 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PhaeoP54_03905 127748b3219759028e24fd72a3dcb151 663 PRINTS PR00344 Bacterial sensor protein C-terminal signature 597 607 1.0E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PhaeoP54_03905 127748b3219759028e24fd72a3dcb151 663 PRINTS PR00344 Bacterial sensor protein C-terminal signature 634 647 1.0E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PhaeoP54_03905 127748b3219759028e24fd72a3dcb151 663 PRINTS PR00344 Bacterial sensor protein C-terminal signature 579 593 1.0E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PhaeoP54_03905 127748b3219759028e24fd72a3dcb151 663 PRINTS PR00344 Bacterial sensor protein C-terminal signature 610 628 1.0E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PhaeoP54_03905 127748b3219759028e24fd72a3dcb151 663 SUPERFAMILY SSF55874 508 650 2.75E-33 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PhaeoP54_03905 127748b3219759028e24fd72a3dcb151 663 SUPERFAMILY SSF47384 419 501 8.24E-11 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 PhaeoP54_03905 127748b3219759028e24fd72a3dcb151 663 Gene3D G3DSA:3.30.565.10 512 657 8.1E-32 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PhaeoP54_03905 127748b3219759028e24fd72a3dcb151 663 Gene3D G3DSA:1.10.287.130 400 500 1.2E-10 T 14-10-2018 PhaeoP54_03905 127748b3219759028e24fd72a3dcb151 663 SUPERFAMILY SSF53850 19 244 5.18E-36 T 14-10-2018 PhaeoP54_03905 127748b3219759028e24fd72a3dcb151 663 SMART SM00062 25 244 7.3E-17 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PhaeoP54_03905 127748b3219759028e24fd72a3dcb151 663 SMART SM00387 541 650 4.7E-26 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PhaeoP54_03905 127748b3219759028e24fd72a3dcb151 663 SMART SM00388 431 502 1.6E-5 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PhaeoP54_03905 127748b3219759028e24fd72a3dcb151 663 Gene3D G3DSA:3.40.190.10 31 240 1.8E-30 T 14-10-2018 PhaeoP54_03905 127748b3219759028e24fd72a3dcb151 663 Gene3D G3DSA:3.40.190.10 110 202 1.8E-30 T 14-10-2018 PhaeoP54_02694 951c57afd4bec7bf8afb22fcf2bf5688 313 Pfam PF01380 SIS domain 131 222 8.9E-11 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 PhaeoP54_02694 951c57afd4bec7bf8afb22fcf2bf5688 313 Gene3D G3DSA:3.40.50.10490 21 233 2.3E-48 T 14-10-2018 PhaeoP54_02694 951c57afd4bec7bf8afb22fcf2bf5688 313 SUPERFAMILY SSF53697 24 262 2.43E-48 T 14-10-2018 PhaeoP54_02694 951c57afd4bec7bf8afb22fcf2bf5688 313 Gene3D G3DSA:1.10.8.1080 235 312 4.0E-19 T 14-10-2018 PhaeoP54_02732 29e45f2f0f485ca436a3635882e514eb 876 Pfam PF13476 AAA domain 5 255 7.7E-10 T 14-10-2018 IPR038729 Rad50/SbcC-type AAA domain PhaeoP54_02732 29e45f2f0f485ca436a3635882e514eb 876 Gene3D G3DSA:3.40.50.300 644 870 8.7E-16 T 14-10-2018 PhaeoP54_02732 29e45f2f0f485ca436a3635882e514eb 876 Gene3D G3DSA:3.40.50.300 1 423 9.7E-23 T 14-10-2018 PhaeoP54_02732 29e45f2f0f485ca436a3635882e514eb 876 SUPERFAMILY SSF52540 1 857 2.17E-15 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_01851 044b1a2dbf030b271d155d7801ab3bb0 414 TIGRFAM TIGR01373 soxB: sarcosine oxidase, beta subunit family 3 406 4.4E-191 T 14-10-2018 IPR006278 Sarcosine oxidase subunit beta GO:0008115|GO:0046653|GO:0055114 KEGG: 00260+1.5.3.1|MetaCyc: PWY-3661|MetaCyc: PWY-4722 PhaeoP54_01851 044b1a2dbf030b271d155d7801ab3bb0 414 SUPERFAMILY SSF51905 32 390 2.71E-46 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PhaeoP54_01851 044b1a2dbf030b271d155d7801ab3bb0 414 Pfam PF01266 FAD dependent oxidoreductase 34 381 2.2E-58 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 PhaeoP54_01851 044b1a2dbf030b271d155d7801ab3bb0 414 Gene3D G3DSA:3.50.50.60 34 387 1.7E-104 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PhaeoP54_01851 044b1a2dbf030b271d155d7801ab3bb0 414 Gene3D G3DSA:3.30.9.10 115 345 1.7E-104 T 14-10-2018 PhaeoP54_01857 b5aa6348173e3fcc42dc3b92be3688ec 288 Pfam PF01925 Sulfite exporter TauE/SafE 28 281 2.7E-49 T 14-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 PhaeoP54_00086 bd923015eab777632d356b2424f553ca 335 Gene3D G3DSA:3.40.50.300 29 198 3.8E-40 T 14-10-2018 PhaeoP54_00086 bd923015eab777632d356b2424f553ca 335 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 48 181 2.5E-56 T 14-10-2018 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 PhaeoP54_00086 bd923015eab777632d356b2424f553ca 335 SUPERFAMILY SSF52540 16 306 1.19E-40 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_00086 bd923015eab777632d356b2424f553ca 335 PIRSF PIRSF002849 2 332 1.3E-107 T 14-10-2018 PhaeoP54_00086 bd923015eab777632d356b2424f553ca 335 Gene3D G3DSA:1.10.8.300 211 327 8.3E-25 T 14-10-2018 PhaeoP54_03610 022c998b62388a531dfb1c5acde4aa0a 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 4.5E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PhaeoP54_03610 022c998b62388a531dfb1c5acde4aa0a 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 4.5E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PhaeoP54_03610 022c998b62388a531dfb1c5acde4aa0a 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 4.5E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PhaeoP54_03610 022c998b62388a531dfb1c5acde4aa0a 308 SUPERFAMILY SSF53850 91 293 5.79E-26 T 14-10-2018 PhaeoP54_03610 022c998b62388a531dfb1c5acde4aa0a 308 SUPERFAMILY SSF46785 2 83 1.82E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_03610 022c998b62388a531dfb1c5acde4aa0a 308 Gene3D G3DSA:1.10.10.10 7 91 3.9E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_03610 022c998b62388a531dfb1c5acde4aa0a 308 Gene3D G3DSA:3.40.190.10 105 286 4.2E-34 T 14-10-2018 PhaeoP54_03610 022c998b62388a531dfb1c5acde4aa0a 308 Gene3D G3DSA:3.40.190.10 163 258 4.2E-34 T 14-10-2018 PhaeoP54_03610 022c998b62388a531dfb1c5acde4aa0a 308 Pfam PF03466 LysR substrate binding domain 90 290 6.7E-25 T 14-10-2018 IPR005119 LysR, substrate-binding PhaeoP54_03610 022c998b62388a531dfb1c5acde4aa0a 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 66 1.3E-19 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PhaeoP54_00265 1df05ba177f45aad018114a14b703f3a 636 SUPERFAMILY SSF103088 481 599 2.22E-32 T 14-10-2018 IPR036737 OmpA-like domain superfamily PhaeoP54_00265 1df05ba177f45aad018114a14b703f3a 636 PRINTS PR01021 OMPA domain signature 544 560 4.8E-8 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 PhaeoP54_00265 1df05ba177f45aad018114a14b703f3a 636 PRINTS PR01021 OMPA domain signature 529 544 4.8E-8 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 PhaeoP54_00265 1df05ba177f45aad018114a14b703f3a 636 PRINTS PR01021 OMPA domain signature 499 521 4.8E-8 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 PhaeoP54_00265 1df05ba177f45aad018114a14b703f3a 636 Gene3D G3DSA:3.30.1330.60 481 607 2.1E-36 T 14-10-2018 IPR036737 OmpA-like domain superfamily PhaeoP54_00265 1df05ba177f45aad018114a14b703f3a 636 Pfam PF00691 OmpA family 498 593 1.3E-18 T 14-10-2018 IPR006665 OmpA-like domain PhaeoP54_02687 77ba9d7b8b47b8a53c07e0b8feaa20d3 334 SUPERFAMILY SSF53448 3 303 2.34E-47 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PhaeoP54_02687 77ba9d7b8b47b8a53c07e0b8feaa20d3 334 Pfam PF00535 Glycosyl transferase family 2 4 167 8.4E-34 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 PhaeoP54_02687 77ba9d7b8b47b8a53c07e0b8feaa20d3 334 Gene3D G3DSA:3.90.550.10 1 213 3.6E-39 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PhaeoP54_00491 21bb0b0938d5e077144b77d9b12e837e 371 SUPERFAMILY SSF52540 24 249 1.19E-62 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_00491 21bb0b0938d5e077144b77d9b12e837e 371 SMART SM00382 34 218 9.0E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_00491 21bb0b0938d5e077144b77d9b12e837e 371 Pfam PF08402 TOBE domain 281 345 7.6E-9 T 14-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 PhaeoP54_00491 21bb0b0938d5e077144b77d9b12e837e 371 Gene3D G3DSA:3.40.50.300 4 228 2.1E-52 T 14-10-2018 PhaeoP54_00491 21bb0b0938d5e077144b77d9b12e837e 371 Gene3D G3DSA:2.40.50.140 288 339 2.5E-16 T 14-10-2018 PhaeoP54_00491 21bb0b0938d5e077144b77d9b12e837e 371 SUPERFAMILY SSF50331 243 347 6.56E-14 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal PhaeoP54_00491 21bb0b0938d5e077144b77d9b12e837e 371 Gene3D G3DSA:2.40.50.940 229 347 2.5E-16 T 14-10-2018 PhaeoP54_00491 21bb0b0938d5e077144b77d9b12e837e 371 Pfam PF00005 ABC transporter 25 168 6.0E-22 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PhaeoP54_00676 35f3f75684008fc0ba7c2957ec507046 144 SUPERFAMILY SSF52402 1 144 8.37E-33 T 14-10-2018 PhaeoP54_00676 35f3f75684008fc0ba7c2957ec507046 144 PRINTS PR01438 Universal stress protein signature 2 20 4.4E-11 T 14-10-2018 IPR006015 Universal stress protein A PhaeoP54_00676 35f3f75684008fc0ba7c2957ec507046 144 PRINTS PR01438 Universal stress protein signature 122 144 4.4E-11 T 14-10-2018 IPR006015 Universal stress protein A PhaeoP54_00676 35f3f75684008fc0ba7c2957ec507046 144 PRINTS PR01438 Universal stress protein signature 104 116 4.4E-11 T 14-10-2018 IPR006015 Universal stress protein A PhaeoP54_00676 35f3f75684008fc0ba7c2957ec507046 144 Gene3D G3DSA:3.40.50.620 1 144 1.1E-33 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PhaeoP54_00676 35f3f75684008fc0ba7c2957ec507046 144 Pfam PF00582 Universal stress protein family 1 144 1.3E-31 T 14-10-2018 IPR006016 UspA PhaeoP54_01578 4a8f4981422558f12b7c7158dce73e53 336 Pfam PF02653 Branched-chain amino acid transport system / permease component 19 323 7.7E-38 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 PhaeoP54_01201 12d396910dccf3dd0ed3f779ed400208 719 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 10 303 8.2E-30 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PhaeoP54_01201 12d396910dccf3dd0ed3f779ed400208 719 SUPERFAMILY SSF55326 393 541 1.3E-32 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily PhaeoP54_01201 12d396910dccf3dd0ed3f779ed400208 719 SUPERFAMILY SSF56042 546 711 5.38E-42 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily PhaeoP54_01201 12d396910dccf3dd0ed3f779ed400208 719 TIGRFAM TIGR03169 Nterm_to_SelD: pyridine nucleotide-disulfide oxidoreductase family protein 11 368 1.7E-154 T 14-10-2018 IPR017584 Pyridine nucleotide-disulphide oxidoreductase family protein, N-terminal PhaeoP54_01201 12d396910dccf3dd0ed3f779ed400208 719 Pfam PF00586 AIR synthase related protein, N-terminal domain 430 538 4.2E-16 T 14-10-2018 IPR016188 PurM-like, N-terminal domain PhaeoP54_01201 12d396910dccf3dd0ed3f779ed400208 719 TIGRFAM TIGR00476 selD: selenide, water dikinase 391 688 2.3E-93 T 14-10-2018 IPR004536 Selenophosphate synthetase GO:0005524 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 PhaeoP54_01201 12d396910dccf3dd0ed3f779ed400208 719 SUPERFAMILY SSF51905 6 173 2.02E-19 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PhaeoP54_01201 12d396910dccf3dd0ed3f779ed400208 719 Gene3D G3DSA:3.90.650.10 546 717 8.6E-52 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily PhaeoP54_01201 12d396910dccf3dd0ed3f779ed400208 719 SUPERFAMILY SSF51905 146 315 3.56E-22 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PhaeoP54_01201 12d396910dccf3dd0ed3f779ed400208 719 Gene3D G3DSA:3.30.1330.10 389 542 1.1E-34 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily PhaeoP54_01201 12d396910dccf3dd0ed3f779ed400208 719 Gene3D G3DSA:3.50.50.100 9 377 2.7E-65 T 14-10-2018 PhaeoP54_01201 12d396910dccf3dd0ed3f779ed400208 719 Pfam PF02769 AIR synthase related protein, C-terminal domain 549 712 2.6E-21 T 14-10-2018 IPR010918 PurM-like, C-terminal domain PhaeoP54_01201 12d396910dccf3dd0ed3f779ed400208 719 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 153 171 1.1E-9 T 14-10-2018 PhaeoP54_01201 12d396910dccf3dd0ed3f779ed400208 719 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 263 285 1.1E-9 T 14-10-2018 PhaeoP54_02199 5cfce4006d4df5197bf8fd9624b1e2c0 249 SUPERFAMILY SSF53187 1 236 3.77E-70 T 14-10-2018 PhaeoP54_02199 5cfce4006d4df5197bf8fd9624b1e2c0 249 Gene3D G3DSA:3.40.630.40 5 243 7.3E-79 T 14-10-2018 PhaeoP54_02199 5cfce4006d4df5197bf8fd9624b1e2c0 249 Pfam PF05013 N-formylglutamate amidohydrolase 15 218 3.6E-40 T 14-10-2018 IPR007709 N-formylglutamate amidohydrolase PhaeoP54_02199 5cfce4006d4df5197bf8fd9624b1e2c0 249 PIRSF PIRSF029730 1 248 4.4E-85 T 14-10-2018 IPR011227 Uncharacterised conserved protein UCP029730 PhaeoP54_03367 577c7e074ce8d80621d115b8cdd91479 354 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 198 209 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PhaeoP54_03367 577c7e074ce8d80621d115b8cdd91479 354 Pfam PF13484 4Fe-4S double cluster binding domain 197 261 6.2E-18 T 14-10-2018 PhaeoP54_03367 577c7e074ce8d80621d115b8cdd91479 354 TIGRFAM TIGR00276 TIGR00276: epoxyqueuosine reductase 17 352 3.6E-129 T 14-10-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 PhaeoP54_03367 577c7e074ce8d80621d115b8cdd91479 354 SUPERFAMILY SSF46548 171 261 1.26E-16 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 PhaeoP54_03367 577c7e074ce8d80621d115b8cdd91479 354 Hamap MF_00916 Epoxyqueuosine reductase [queG]. 8 320 42.707 T 14-10-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 PhaeoP54_03367 577c7e074ce8d80621d115b8cdd91479 354 Pfam PF08331 Domain of unknown function (DUF1730) 64 145 5.8E-23 T 14-10-2018 IPR013542 Domain of unknown function DUF1730 MetaCyc: PWY-6700 PhaeoP54_02985 1e8f248a69d642dccc6a48e3fae662dc 250 SUPERFAMILY SSF50800 4 250 7.85E-24 T 14-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily PhaeoP54_02985 1e8f248a69d642dccc6a48e3fae662dc 250 Gene3D G3DSA:2.40.33.20 133 250 4.6E-10 T 14-10-2018 PhaeoP54_02985 1e8f248a69d642dccc6a48e3fae662dc 250 Pfam PF03476 MOSC N-terminal beta barrel domain 5 94 2.8E-9 T 14-10-2018 IPR005303 MOSC, N-terminal beta barrel KEGG: 00790+2.8.1.9|MetaCyc: PWY-5963 PhaeoP54_02985 1e8f248a69d642dccc6a48e3fae662dc 250 Pfam PF03473 MOSC domain 138 247 1.0E-14 T 14-10-2018 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 PhaeoP54_02583 4b6f51bd378459bb6003001e51dd47b3 676 Gene3D G3DSA:3.40.605.10 12 490 7.1E-150 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 PhaeoP54_02583 4b6f51bd378459bb6003001e51dd47b3 676 Pfam PF01575 MaoC like domain 548 651 3.4E-21 T 14-10-2018 IPR002539 MaoC-like dehydratase domain PhaeoP54_02583 4b6f51bd378459bb6003001e51dd47b3 676 SUPERFAMILY SSF54637 532 674 8.78E-34 T 14-10-2018 IPR029069 HotDog domain superfamily PhaeoP54_02583 4b6f51bd378459bb6003001e51dd47b3 676 SUPERFAMILY SSF53720 6 507 3.93E-83 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 PhaeoP54_02583 4b6f51bd378459bb6003001e51dd47b3 676 Pfam PF00171 Aldehyde dehydrogenase family 33 504 1.3E-62 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 PhaeoP54_02583 4b6f51bd378459bb6003001e51dd47b3 676 Gene3D G3DSA:3.40.309.10 261 478 7.1E-150 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 PhaeoP54_02583 4b6f51bd378459bb6003001e51dd47b3 676 TIGRFAM TIGR02278 PaaN-DH: phenylacetic acid degradation protein paaN 6 675 4.2E-300 T 14-10-2018 IPR011966 Phenylacetic acid degradation protein PaaN KEGG: 00360+3.3.2.12+1.2.1.91 PhaeoP54_02583 4b6f51bd378459bb6003001e51dd47b3 676 Gene3D G3DSA:3.10.129.10 533 675 4.0E-37 T 14-10-2018 PhaeoP54_01107 070ab6485675c7b9372913da4d5d0d26 184 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 132 166 4.3E-10 T 14-10-2018 IPR001451 Hexapeptide repeat PhaeoP54_01107 070ab6485675c7b9372913da4d5d0d26 184 SMART SM01266 6 60 3.1E-9 T 14-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 PhaeoP54_01107 070ab6485675c7b9372913da4d5d0d26 184 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 140 168 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 PhaeoP54_01107 070ab6485675c7b9372913da4d5d0d26 184 SUPERFAMILY SSF51161 5 182 5.27E-49 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily PhaeoP54_01107 070ab6485675c7b9372913da4d5d0d26 184 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 95 108 0.13 T 14-10-2018 IPR001451 Hexapeptide repeat PhaeoP54_01107 070ab6485675c7b9372913da4d5d0d26 184 Pfam PF12464 Maltose acetyltransferase 8 45 3.4E-7 T 14-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 PhaeoP54_01107 070ab6485675c7b9372913da4d5d0d26 184 Gene3D G3DSA:2.160.10.10 1 184 7.4E-60 T 14-10-2018 PhaeoP54_00472 90a76bfee4e102276adf94c8369984e0 412 Gene3D G3DSA:3.90.380.10 14 396 2.5E-160 T 14-10-2018 PhaeoP54_00472 90a76bfee4e102276adf94c8369984e0 412 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 175 197 5.8E-23 T 14-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 PhaeoP54_00472 90a76bfee4e102276adf94c8369984e0 412 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 57 72 5.8E-23 T 14-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 PhaeoP54_00472 90a76bfee4e102276adf94c8369984e0 412 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 99 119 5.8E-23 T 14-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 PhaeoP54_00472 90a76bfee4e102276adf94c8369984e0 412 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 138 164 5.8E-23 T 14-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 PhaeoP54_00472 90a76bfee4e102276adf94c8369984e0 412 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 27 52 5.8E-23 T 14-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 PhaeoP54_00472 90a76bfee4e102276adf94c8369984e0 412 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 78 98 5.8E-23 T 14-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 PhaeoP54_00472 90a76bfee4e102276adf94c8369984e0 412 SUPERFAMILY SSF50022 14 153 7.99E-43 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 PhaeoP54_00472 90a76bfee4e102276adf94c8369984e0 412 Pfam PF00355 Rieske [2Fe-2S] domain 43 123 1.0E-14 T 14-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 PhaeoP54_00472 90a76bfee4e102276adf94c8369984e0 412 Gene3D G3DSA:2.102.10.10 40 158 2.5E-160 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 PhaeoP54_00472 90a76bfee4e102276adf94c8369984e0 412 SUPERFAMILY SSF55961 154 401 1.73E-55 T 14-10-2018 PhaeoP54_00472 90a76bfee4e102276adf94c8369984e0 412 ProSitePatterns PS00570 Bacterial ring hydroxylating dioxygenases alpha-subunit signature. 85 108 - T 14-10-2018 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site GO:0005506|GO:0051537|GO:0055114 PhaeoP54_00472 90a76bfee4e102276adf94c8369984e0 412 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 176 399 4.6E-40 T 14-10-2018 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0044237|GO:0051537|GO:0055114 PhaeoP54_02745 486d7e2a6e5273f3b9b0327cde5d5d15 282 SUPERFAMILY SSF52540 9 249 1.22E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_02745 486d7e2a6e5273f3b9b0327cde5d5d15 282 Gene3D G3DSA:3.40.50.300 7 280 6.5E-83 T 14-10-2018 PhaeoP54_02745 486d7e2a6e5273f3b9b0327cde5d5d15 282 SMART SM00382 37 236 6.0E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_02745 486d7e2a6e5273f3b9b0327cde5d5d15 282 Pfam PF00005 ABC transporter 38 187 1.4E-22 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PhaeoP54_00699 9f089ba253138c0022ca8350e2ba206e 203 ProSitePatterns PS00160 KDPG and KHG aldolases Schiff-base forming residue. 117 130 - T 14-10-2018 IPR031338 KDPG/KHG aldolase, active site 2 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 PhaeoP54_00699 9f089ba253138c0022ca8350e2ba206e 203 SUPERFAMILY SSF51569 2 198 5.13E-53 T 14-10-2018 PhaeoP54_00699 9f089ba253138c0022ca8350e2ba206e 203 Gene3D G3DSA:3.20.20.70 2 201 1.1E-54 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PhaeoP54_00699 9f089ba253138c0022ca8350e2ba206e 203 Pfam PF01081 KDPG and KHG aldolase 4 178 4.6E-28 T 14-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 PhaeoP54_02240 bf325f85ab159f0f2b96261b8df66f99 296 Gene3D G3DSA:3.30.479.30 49 186 1.3E-17 T 14-10-2018 PhaeoP54_02240 bf325f85ab159f0f2b96261b8df66f99 296 Pfam PF01145 SPFH domain / Band 7 family 24 200 1.0E-24 T 14-10-2018 IPR001107 Band 7 domain PhaeoP54_02240 bf325f85ab159f0f2b96261b8df66f99 296 SUPERFAMILY SSF117892 52 191 6.15E-24 T 14-10-2018 IPR036013 Band 7/SPFH domain superfamily PhaeoP54_02240 bf325f85ab159f0f2b96261b8df66f99 296 SMART SM00244 20 184 3.2E-24 T 14-10-2018 IPR001107 Band 7 domain PhaeoP54_02240 bf325f85ab159f0f2b96261b8df66f99 296 PIRSF PIRSF005651 1 293 7.3E-87 T 14-10-2018 IPR010200 HflC GO:0016021|GO:0052547 PhaeoP54_00060 ae7e78f4c439858334da44db1d7b8204 315 SUPERFAMILY SSF161098 91 299 1.26E-21 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_00060 ae7e78f4c439858334da44db1d7b8204 315 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 114 312 3.1E-38 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PhaeoP54_00060 ae7e78f4c439858334da44db1d7b8204 315 Gene3D G3DSA:1.10.3720.10 85 306 1.4E-25 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_02473 38870de42dc109cada0940a62e73aa5e 681 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 6 341 4.7E-41 T 14-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 PhaeoP54_02473 38870de42dc109cada0940a62e73aa5e 681 Gene3D G3DSA:3.50.50.60 483 611 2.2E-58 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PhaeoP54_02473 38870de42dc109cada0940a62e73aa5e 681 Gene3D G3DSA:3.40.50.720 388 674 2.2E-58 T 14-10-2018 PhaeoP54_02473 38870de42dc109cada0940a62e73aa5e 681 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 471 489 4.9E-5 T 14-10-2018 PhaeoP54_02473 38870de42dc109cada0940a62e73aa5e 681 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 389 408 4.9E-5 T 14-10-2018 PhaeoP54_02473 38870de42dc109cada0940a62e73aa5e 681 Gene3D G3DSA:3.20.20.70 4 378 2.3E-84 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PhaeoP54_02473 38870de42dc109cada0940a62e73aa5e 681 SUPERFAMILY SSF51395 1 370 2.6E-82 T 14-10-2018 PhaeoP54_02473 38870de42dc109cada0940a62e73aa5e 681 SUPERFAMILY SSF51905 365 679 4.53E-32 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PhaeoP54_02473 38870de42dc109cada0940a62e73aa5e 681 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 380 488 8.4E-8 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PhaeoP54_02473 38870de42dc109cada0940a62e73aa5e 681 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 388 410 2.8E-6 T 14-10-2018 PhaeoP54_02473 38870de42dc109cada0940a62e73aa5e 681 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 655 662 2.8E-6 T 14-10-2018 PhaeoP54_01408 8e15b39221d8b947c89b3ea7af2a18e8 798 Gene3D G3DSA:3.10.20.310 43 114 4.4E-14 T 14-10-2018 PhaeoP54_01408 8e15b39221d8b947c89b3ea7af2a18e8 798 Gene3D G3DSA:3.10.20.310 360 444 8.1E-20 T 14-10-2018 PhaeoP54_01408 8e15b39221d8b947c89b3ea7af2a18e8 798 Gene3D G3DSA:2.40.160.50 445 798 1.5E-73 T 14-10-2018 PhaeoP54_01408 8e15b39221d8b947c89b3ea7af2a18e8 798 PIRSF PIRSF006076 16 798 2.2E-199 T 14-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 PhaeoP54_01408 8e15b39221d8b947c89b3ea7af2a18e8 798 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 51 798 3.9E-194 T 14-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 PhaeoP54_01408 8e15b39221d8b947c89b3ea7af2a18e8 798 Pfam PF01103 Surface antigen 469 795 8.9E-50 T 14-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 PhaeoP54_01408 8e15b39221d8b947c89b3ea7af2a18e8 798 Gene3D G3DSA:3.10.20.310 116 193 1.7E-13 T 14-10-2018 PhaeoP54_01408 8e15b39221d8b947c89b3ea7af2a18e8 798 Hamap MF_01430 Outer membrane protein assembly factor BamA [bamA]. 25 798 21.378 T 14-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 PhaeoP54_01408 8e15b39221d8b947c89b3ea7af2a18e8 798 Pfam PF07244 Surface antigen variable number repeat 116 193 3.2E-12 T 14-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 PhaeoP54_01408 8e15b39221d8b947c89b3ea7af2a18e8 798 Pfam PF07244 Surface antigen variable number repeat 197 284 1.5E-13 T 14-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 PhaeoP54_01408 8e15b39221d8b947c89b3ea7af2a18e8 798 Pfam PF07244 Surface antigen variable number repeat 371 441 8.6E-10 T 14-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 PhaeoP54_01408 8e15b39221d8b947c89b3ea7af2a18e8 798 Pfam PF07244 Surface antigen variable number repeat 288 360 1.8E-5 T 14-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 PhaeoP54_01408 8e15b39221d8b947c89b3ea7af2a18e8 798 Pfam PF07244 Surface antigen variable number repeat 49 114 8.0E-5 T 14-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 PhaeoP54_01408 8e15b39221d8b947c89b3ea7af2a18e8 798 Gene3D G3DSA:3.10.20.310 197 287 2.4E-19 T 14-10-2018 PhaeoP54_01408 8e15b39221d8b947c89b3ea7af2a18e8 798 Gene3D G3DSA:3.10.20.310 288 359 1.3E-8 T 14-10-2018 PhaeoP54_01956 608e543f8a8ba35366f825db55efc5dd 151 SMART SM00344 1 110 2.1E-45 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 PhaeoP54_01956 608e543f8a8ba35366f825db55efc5dd 151 SUPERFAMILY SSF54909 61 150 6.57E-22 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel PhaeoP54_01956 608e543f8a8ba35366f825db55efc5dd 151 Pfam PF13412 Winged helix-turn-helix DNA-binding 2 47 5.1E-19 T 14-10-2018 PhaeoP54_01956 608e543f8a8ba35366f825db55efc5dd 151 Gene3D G3DSA:1.10.10.10 2 52 2.4E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_01956 608e543f8a8ba35366f825db55efc5dd 151 SUPERFAMILY SSF46785 1 60 7.18E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_01956 608e543f8a8ba35366f825db55efc5dd 151 Pfam PF01037 Lrp/AsnC ligand binding domain 67 141 4.1E-23 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain PhaeoP54_01956 608e543f8a8ba35366f825db55efc5dd 151 Gene3D G3DSA:3.30.70.920 54 138 5.1E-26 T 14-10-2018 PhaeoP54_01956 608e543f8a8ba35366f825db55efc5dd 151 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 17 28 5.1E-17 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 PhaeoP54_01956 608e543f8a8ba35366f825db55efc5dd 151 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 1 17 5.1E-17 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 PhaeoP54_01956 608e543f8a8ba35366f825db55efc5dd 151 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 47 5.1E-17 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 PhaeoP54_03076 6c4002f9c2113730c9f4216a19b02be9 89 Pfam PF00381 PTS HPr component phosphorylation site 3 81 3.3E-21 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like PhaeoP54_03076 6c4002f9c2113730c9f4216a19b02be9 89 Gene3D G3DSA:3.30.1340.10 1 82 8.9E-26 T 14-10-2018 IPR035895 HPr-like superfamily PhaeoP54_03076 6c4002f9c2113730c9f4216a19b02be9 89 PRINTS PR00107 Phosphocarrier protein signature 13 29 2.1E-11 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like PhaeoP54_03076 6c4002f9c2113730c9f4216a19b02be9 89 PRINTS PR00107 Phosphocarrier protein signature 53 70 2.1E-11 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like PhaeoP54_03076 6c4002f9c2113730c9f4216a19b02be9 89 PRINTS PR00107 Phosphocarrier protein signature 38 53 2.1E-11 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like PhaeoP54_03076 6c4002f9c2113730c9f4216a19b02be9 89 SUPERFAMILY SSF55594 1 87 3.79E-24 T 14-10-2018 IPR035895 HPr-like superfamily PhaeoP54_03076 6c4002f9c2113730c9f4216a19b02be9 89 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 13 20 - T 14-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site PhaeoP54_03076 6c4002f9c2113730c9f4216a19b02be9 89 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 81 2.3E-24 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like PhaeoP54_00463 e756af1bc33f9428fcd0337c4b0226d3 252 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 107 117 - T 14-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 PhaeoP54_00463 e756af1bc33f9428fcd0337c4b0226d3 252 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 1 177 32.96 T 14-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 PhaeoP54_00463 e756af1bc33f9428fcd0337c4b0226d3 252 Gene3D G3DSA:3.40.50.1470 1 187 1.2E-63 T 14-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 PhaeoP54_00463 e756af1bc33f9428fcd0337c4b0226d3 252 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 14 27 - T 14-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 PhaeoP54_00463 e756af1bc33f9428fcd0337c4b0226d3 252 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 1 163 2.4E-53 T 14-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 PhaeoP54_00463 e756af1bc33f9428fcd0337c4b0226d3 252 Pfam PF01195 Peptidyl-tRNA hydrolase 3 173 3.7E-51 T 14-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 PhaeoP54_00463 e756af1bc33f9428fcd0337c4b0226d3 252 SUPERFAMILY SSF53178 1 183 1.83E-66 T 14-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 PhaeoP54_01369 67a8f6892b1f4da1a21c0ea20cca43b3 127 Gene3D G3DSA:3.10.180.10 2 127 1.2E-20 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PhaeoP54_01369 67a8f6892b1f4da1a21c0ea20cca43b3 127 SUPERFAMILY SSF54593 14 126 6.74E-19 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PhaeoP54_01369 67a8f6892b1f4da1a21c0ea20cca43b3 127 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 15 120 2.3E-6 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain PhaeoP54_03954 9ffbf03d1ba91d1ee272f0fb0df879ac 149 Gene3D G3DSA:1.10.10.10 1 132 1.5E-29 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_03954 9ffbf03d1ba91d1ee272f0fb0df879ac 149 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 48 66 - T 14-10-2018 IPR030489 Transcription regulator Rrf2-type, conserved site PhaeoP54_03954 9ffbf03d1ba91d1ee272f0fb0df879ac 149 SUPERFAMILY SSF46785 2 127 1.75E-31 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_03954 9ffbf03d1ba91d1ee272f0fb0df879ac 149 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 126 3.2E-29 T 14-10-2018 IPR000944 Transcription regulator Rrf2-type PhaeoP54_03954 9ffbf03d1ba91d1ee272f0fb0df879ac 149 Pfam PF02082 Transcriptional regulator 1 81 4.4E-22 T 14-10-2018 IPR000944 Transcription regulator Rrf2-type PhaeoP54_01896 10612394818dfca1b922d863710cb513 278 TIGRFAM TIGR00444 mazG: MazG family protein 20 266 1.2E-90 T 14-10-2018 IPR011551 NTP pyrophosphohydrolase MazG PhaeoP54_01896 10612394818dfca1b922d863710cb513 278 SUPERFAMILY SSF101386 13 115 4.67E-24 T 14-10-2018 PhaeoP54_01896 10612394818dfca1b922d863710cb513 278 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 37 110 4.0E-27 T 14-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core PhaeoP54_01896 10612394818dfca1b922d863710cb513 278 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 176 236 1.1E-6 T 14-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core PhaeoP54_01896 10612394818dfca1b922d863710cb513 278 SUPERFAMILY SSF101386 147 245 6.71E-24 T 14-10-2018 PhaeoP54_01896 10612394818dfca1b922d863710cb513 278 Gene3D G3DSA:1.10.287.1080 10 136 2.4E-46 T 14-10-2018 PhaeoP54_01896 10612394818dfca1b922d863710cb513 278 Gene3D G3DSA:1.10.287.1080 141 270 1.5E-44 T 14-10-2018 PhaeoP54_03658 98ff892392a7f4a262dab02bb5d38937 184 PRINTS PR01837 MgtC/SapB protein signature 60 78 3.8E-31 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 PhaeoP54_03658 98ff892392a7f4a262dab02bb5d38937 184 PRINTS PR01837 MgtC/SapB protein signature 93 115 3.8E-31 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 PhaeoP54_03658 98ff892392a7f4a262dab02bb5d38937 184 PRINTS PR01837 MgtC/SapB protein signature 122 146 3.8E-31 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 PhaeoP54_03658 98ff892392a7f4a262dab02bb5d38937 184 PRINTS PR01837 MgtC/SapB protein signature 41 60 3.8E-31 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 PhaeoP54_03658 98ff892392a7f4a262dab02bb5d38937 184 Pfam PF02308 MgtC family 39 167 4.5E-29 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 PhaeoP54_03658 98ff892392a7f4a262dab02bb5d38937 184 SUPERFAMILY SSF103473 29 160 1.15E-5 T 14-10-2018 IPR036259 MFS transporter superfamily PhaeoP54_01406 0f0e0395a34b89a27dc803f08a0e92b5 449 SUPERFAMILY SSF50156 124 214 2.1E-7 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 PhaeoP54_01406 0f0e0395a34b89a27dc803f08a0e92b5 449 Gene3D G3DSA:2.30.42.10 222 309 2.0E-15 T 14-10-2018 PhaeoP54_01406 0f0e0395a34b89a27dc803f08a0e92b5 449 SMART SM00228 139 210 1.1 T 14-10-2018 IPR001478 PDZ domain GO:0005515 PhaeoP54_01406 0f0e0395a34b89a27dc803f08a0e92b5 449 SMART SM00228 213 279 0.096 T 14-10-2018 IPR001478 PDZ domain GO:0005515 PhaeoP54_01406 0f0e0395a34b89a27dc803f08a0e92b5 449 Gene3D G3DSA:2.30.42.10 147 217 3.6E-5 T 14-10-2018 PhaeoP54_01406 0f0e0395a34b89a27dc803f08a0e92b5 449 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 14 447 2.0E-77 T 14-10-2018 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 PhaeoP54_01406 0f0e0395a34b89a27dc803f08a0e92b5 449 Pfam PF02163 Peptidase family M50 20 438 8.7E-70 T 14-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 PhaeoP54_01406 0f0e0395a34b89a27dc803f08a0e92b5 449 SUPERFAMILY SSF50156 222 299 6.05E-14 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 PhaeoP54_01644 d391321ddc8086e9842b559fb3ab7d2f 797 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 75 227 3.0E-10 T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 PhaeoP54_01644 d391321ddc8086e9842b559fb3ab7d2f 797 Gene3D G3DSA:3.40.50.920 645 788 1.1E-12 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 PhaeoP54_01644 d391321ddc8086e9842b559fb3ab7d2f 797 Gene3D G3DSA:3.40.50.970 398 637 6.1E-73 T 14-10-2018 PhaeoP54_01644 d391321ddc8086e9842b559fb3ab7d2f 797 SUPERFAMILY SSF52518 10 376 2.14E-78 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold PhaeoP54_01644 d391321ddc8086e9842b559fb3ab7d2f 797 SUPERFAMILY SSF52518 401 631 1.86E-58 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold PhaeoP54_01644 d391321ddc8086e9842b559fb3ab7d2f 797 PIRSF PIRSF000156 3 793 3.1E-59 T 14-10-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 PhaeoP54_01644 d391321ddc8086e9842b559fb3ab7d2f 797 SUPERFAMILY SSF52922 636 791 1.2E-24 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 PhaeoP54_01644 d391321ddc8086e9842b559fb3ab7d2f 797 Gene3D G3DSA:3.40.50.970 3 383 4.2E-74 T 14-10-2018 PhaeoP54_01644 d391321ddc8086e9842b559fb3ab7d2f 797 SMART SM00861 411 630 1.7E-4 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain PhaeoP54_03069 0b1607908102bcf17d4ec53371798b75 68 Pfam PF04588 Hypoxia induced protein conserved region 7 57 1.4E-10 T 14-10-2018 IPR007667 Hypoxia induced protein, domain PhaeoP54_03418 7f06461160e885bc3c76819315a71894 415 Gene3D G3DSA:3.40.50.150 70 406 2.9E-74 T 14-10-2018 PhaeoP54_03418 7f06461160e885bc3c76819315a71894 415 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 331 407 9.8E-10 T 14-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 PhaeoP54_03418 7f06461160e885bc3c76819315a71894 415 Gene3D G3DSA:3.40.1350.30 114 245 2.9E-74 T 14-10-2018 PhaeoP54_03418 7f06461160e885bc3c76819315a71894 415 Gene3D G3DSA:2.40.50.140 1 69 1.2E-5 T 14-10-2018 PhaeoP54_03418 7f06461160e885bc3c76819315a71894 415 SUPERFAMILY SSF53335 58 407 2.81E-48 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PhaeoP54_03418 7f06461160e885bc3c76819315a71894 415 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 345 375 - T 14-10-2018 IPR030390 RNA methyltransferase TrmA, active site PhaeoP54_02311 d9cfa5a003a6fcfdf41e498012cc19ca 293 Pfam PF13410 Glutathione S-transferase, C-terminal domain 180 244 2.2E-8 T 14-10-2018 PhaeoP54_02311 d9cfa5a003a6fcfdf41e498012cc19ca 293 SUPERFAMILY SSF52833 39 130 7.8E-16 T 14-10-2018 IPR036249 Thioredoxin-like superfamily PhaeoP54_02311 d9cfa5a003a6fcfdf41e498012cc19ca 293 Gene3D G3DSA:3.40.30.10 18 255 6.9E-113 T 14-10-2018 PhaeoP54_02311 d9cfa5a003a6fcfdf41e498012cc19ca 293 Pfam PF02798 Glutathione S-transferase, N-terminal domain 66 127 4.6E-5 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 PhaeoP54_02311 d9cfa5a003a6fcfdf41e498012cc19ca 293 Gene3D G3DSA:1.20.1050.10 133 249 6.9E-113 T 14-10-2018 PhaeoP54_02311 d9cfa5a003a6fcfdf41e498012cc19ca 293 SUPERFAMILY SSF47616 117 259 1.39E-33 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily PhaeoP54_01043 8e321831f6d66172aa408619ff79a7d2 161 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 1 21 2.1E-11 T 14-10-2018 PhaeoP54_01043 8e321831f6d66172aa408619ff79a7d2 161 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 21 40 2.1E-11 T 14-10-2018 PhaeoP54_01043 8e321831f6d66172aa408619ff79a7d2 161 TIGRFAM TIGR01410 tatB: twin arginine-targeting protein translocase TatB 2 67 3.1E-19 T 14-10-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 PhaeoP54_01043 8e321831f6d66172aa408619ff79a7d2 161 Pfam PF02416 mttA/Hcf106 family 4 37 8.5E-7 T 14-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 PhaeoP54_01043 8e321831f6d66172aa408619ff79a7d2 161 Hamap MF_00237 Sec-independent protein translocase protein TatB [tatB]. 1 161 14.076 T 14-10-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 PhaeoP54_03655 3dfcff99164c96aefdba4a0f52468ee1 391 Gene3D G3DSA:1.10.101.10 327 391 1.9E-10 T 14-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 PhaeoP54_03655 3dfcff99164c96aefdba4a0f52468ee1 391 Pfam PF01471 Putative peptidoglycan binding domain 335 388 3.4E-12 T 14-10-2018 IPR002477 Peptidoglycan binding-like PhaeoP54_03655 3dfcff99164c96aefdba4a0f52468ee1 391 TIGRFAM TIGR02283 MltB_2: lytic murein transglycosylase 57 272 5.1E-80 T 14-10-2018 IPR011970 Lytic murein transglycosylase PhaeoP54_03655 3dfcff99164c96aefdba4a0f52468ee1 391 SUPERFAMILY SSF53955 54 321 7.31E-89 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily PhaeoP54_03655 3dfcff99164c96aefdba4a0f52468ee1 391 SUPERFAMILY SSF47090 323 390 7.85E-17 T 14-10-2018 IPR036365 PGBD-like superfamily PhaeoP54_03655 3dfcff99164c96aefdba4a0f52468ee1 391 Pfam PF13406 Transglycosylase SLT domain 276 314 2.3E-8 T 14-10-2018 IPR031304 Transglycosylase SLT domain 2 PhaeoP54_03655 3dfcff99164c96aefdba4a0f52468ee1 391 Pfam PF13406 Transglycosylase SLT domain 57 274 1.1E-83 T 14-10-2018 IPR031304 Transglycosylase SLT domain 2 PhaeoP54_03655 3dfcff99164c96aefdba4a0f52468ee1 391 Gene3D G3DSA:1.10.8.350 70 232 8.2E-69 T 14-10-2018 PhaeoP54_03655 3dfcff99164c96aefdba4a0f52468ee1 391 Gene3D G3DSA:1.10.530.10 99 271 8.2E-69 T 14-10-2018 PhaeoP54_01906 85bac558da041cd894d57390b58f145e 312 Gene3D G3DSA:3.40.190.10 174 272 1.7E-46 T 14-10-2018 PhaeoP54_01906 85bac558da041cd894d57390b58f145e 312 Pfam PF03466 LysR substrate binding domain 102 303 9.1E-32 T 14-10-2018 IPR005119 LysR, substrate-binding PhaeoP54_01906 85bac558da041cd894d57390b58f145e 312 SUPERFAMILY SSF53850 102 307 3.26E-38 T 14-10-2018 PhaeoP54_01906 85bac558da041cd894d57390b58f145e 312 Gene3D G3DSA:1.10.10.10 18 101 5.9E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_01906 85bac558da041cd894d57390b58f145e 312 Gene3D G3DSA:3.40.190.10 115 299 1.7E-46 T 14-10-2018 PhaeoP54_01906 85bac558da041cd894d57390b58f145e 312 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 21 77 2.9E-17 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PhaeoP54_01906 85bac558da041cd894d57390b58f145e 312 SUPERFAMILY SSF46785 15 124 7.58E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_03499 364a7ea6c6a737dbf5119dc0237a6e7e 247 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 65 85 2.1E-59 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 PhaeoP54_03499 364a7ea6c6a737dbf5119dc0237a6e7e 247 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 174 194 2.1E-59 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 PhaeoP54_03499 364a7ea6c6a737dbf5119dc0237a6e7e 247 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 219 244 2.1E-59 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 PhaeoP54_03499 364a7ea6c6a737dbf5119dc0237a6e7e 247 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 85 104 2.1E-59 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 PhaeoP54_03499 364a7ea6c6a737dbf5119dc0237a6e7e 247 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 195 216 2.1E-59 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 PhaeoP54_03499 364a7ea6c6a737dbf5119dc0237a6e7e 247 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 46 65 2.1E-59 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 PhaeoP54_03499 364a7ea6c6a737dbf5119dc0237a6e7e 247 Pfam PF00813 FliP family 48 241 1.9E-68 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 PhaeoP54_03499 364a7ea6c6a737dbf5119dc0237a6e7e 247 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 48 245 1.4E-71 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 PhaeoP54_03499 364a7ea6c6a737dbf5119dc0237a6e7e 247 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 235 245 6.9E-15 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 PhaeoP54_03499 364a7ea6c6a737dbf5119dc0237a6e7e 247 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 44 53 6.9E-15 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 PhaeoP54_03499 364a7ea6c6a737dbf5119dc0237a6e7e 247 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 104 116 6.9E-15 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 PhaeoP54_03499 364a7ea6c6a737dbf5119dc0237a6e7e 247 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 167 179 6.9E-15 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 PhaeoP54_03499 364a7ea6c6a737dbf5119dc0237a6e7e 247 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 116 130 6.9E-15 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 PhaeoP54_03273 610cebb868940da1b7ca55e3d79f6cf5 218 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 3 214 3.0E-47 T 14-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 PhaeoP54_03273 610cebb868940da1b7ca55e3d79f6cf5 218 SUPERFAMILY SSF51419 3 212 2.62E-65 T 14-10-2018 IPR029066 PLP-binding barrel PhaeoP54_03273 610cebb868940da1b7ca55e3d79f6cf5 218 Pfam PF01168 Alanine racemase, N-terminal domain 2 214 9.7E-22 T 14-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 PhaeoP54_03273 610cebb868940da1b7ca55e3d79f6cf5 218 Hamap MF_02087 Pyridoxal phosphate homeostasis protein. 1 213 24.967 T 14-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 PhaeoP54_03273 610cebb868940da1b7ca55e3d79f6cf5 218 Gene3D G3DSA:3.20.20.10 1 217 3.5E-70 T 14-10-2018 IPR029066 PLP-binding barrel PhaeoP54_03273 610cebb868940da1b7ca55e3d79f6cf5 218 PIRSF PIRSF004848 2 218 3.4E-58 T 14-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 PhaeoP54_01379 7c1ff1220d78c650a43efe0e6deea9eb 353 Pfam PF00356 Bacterial regulatory proteins, lacI family 5 49 3.0E-14 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 PhaeoP54_01379 7c1ff1220d78c650a43efe0e6deea9eb 353 Gene3D G3DSA:3.40.50.2300 168 301 1.0E-32 T 14-10-2018 PhaeoP54_01379 7c1ff1220d78c650a43efe0e6deea9eb 353 SUPERFAMILY SSF47413 2 60 5.63E-14 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 PhaeoP54_01379 7c1ff1220d78c650a43efe0e6deea9eb 353 Pfam PF13407 Periplasmic binding protein domain 64 322 1.2E-35 T 14-10-2018 IPR025997 Periplasmic binding protein PhaeoP54_01379 7c1ff1220d78c650a43efe0e6deea9eb 353 Gene3D G3DSA:1.10.260.40 1 60 3.4E-18 T 14-10-2018 PhaeoP54_01379 7c1ff1220d78c650a43efe0e6deea9eb 353 Gene3D G3DSA:3.40.50.2300 72 316 1.0E-32 T 14-10-2018 PhaeoP54_01379 7c1ff1220d78c650a43efe0e6deea9eb 353 SMART SM00354 3 73 1.2E-16 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 PhaeoP54_01379 7c1ff1220d78c650a43efe0e6deea9eb 353 SUPERFAMILY SSF53822 62 326 1.95E-32 T 14-10-2018 IPR028082 Periplasmic binding protein-like I PhaeoP54_01379 7c1ff1220d78c650a43efe0e6deea9eb 353 ProSitePatterns PS00356 LacI-type HTH domain signature. 6 24 - T 14-10-2018 PhaeoP54_03570 ccaea2a78398ac533aee5804caf4b1ff 559 SUPERFAMILY SSF111326 7 557 1.7E-256 T 14-10-2018 IPR036190 Urocanase superfamily KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 PhaeoP54_03570 ccaea2a78398ac533aee5804caf4b1ff 559 ProSitePatterns PS01233 Urocanase signature. 445 460 - T 14-10-2018 IPR023636 Urocanase conserved site GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 PhaeoP54_03570 ccaea2a78398ac533aee5804caf4b1ff 559 Pfam PF17391 Urocanase N-terminal domain 15 137 7.0E-60 T 14-10-2018 IPR035400 Urocanase, N-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 PhaeoP54_03570 ccaea2a78398ac533aee5804caf4b1ff 559 Pfam PF17392 Urocanase C-terminal domain 355 549 2.6E-90 T 14-10-2018 IPR035401 Urocanase, C-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 PhaeoP54_03570 ccaea2a78398ac533aee5804caf4b1ff 559 Gene3D G3DSA:3.40.50.10730 141 352 1.4E-252 T 14-10-2018 IPR038364 Urocanase, central domain superfamily KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 PhaeoP54_03570 ccaea2a78398ac533aee5804caf4b1ff 559 TIGRFAM TIGR01228 hutU: urocanate hydratase 11 556 2.0E-282 T 14-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 PhaeoP54_03570 ccaea2a78398ac533aee5804caf4b1ff 559 Hamap MF_00577 Urocanate hydratase [hutU]. 2 559 49.573 T 14-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 PhaeoP54_03570 ccaea2a78398ac533aee5804caf4b1ff 559 PIRSF PIRSF001423 2 559 4.3E-286 T 14-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 PhaeoP54_03570 ccaea2a78398ac533aee5804caf4b1ff 559 Gene3D G3DSA:3.40.1770.10 18 545 1.4E-252 T 14-10-2018 PhaeoP54_03570 ccaea2a78398ac533aee5804caf4b1ff 559 Pfam PF01175 Urocanase Rossmann-like domain 140 352 2.5E-83 T 14-10-2018 IPR035085 Urocanase, Rossmann-like domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 PhaeoP54_03943 1535a3938c1bb9ad911b77c7064ee40d 247 SUPERFAMILY SSF51658 13 231 1.01E-34 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily PhaeoP54_03943 1535a3938c1bb9ad911b77c7064ee40d 247 Pfam PF01261 Xylose isomerase-like TIM barrel 22 205 3.5E-12 T 14-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain PhaeoP54_03943 1535a3938c1bb9ad911b77c7064ee40d 247 Gene3D G3DSA:3.20.20.150 1 246 2.3E-48 T 14-10-2018 PhaeoP54_01603 8f10890bf80e9fbb60e86a5b10af8317 321 Gene3D G3DSA:3.40.190.10 116 254 5.6E-108 T 14-10-2018 PhaeoP54_01603 8f10890bf80e9fbb60e86a5b10af8317 321 Gene3D G3DSA:3.40.190.10 29 318 5.6E-108 T 14-10-2018 PhaeoP54_01603 8f10890bf80e9fbb60e86a5b10af8317 321 SUPERFAMILY SSF53850 25 320 4.04E-89 T 14-10-2018 PhaeoP54_01603 8f10890bf80e9fbb60e86a5b10af8317 321 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 6 318 3.6E-113 T 14-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family PhaeoP54_01603 8f10890bf80e9fbb60e86a5b10af8317 321 Pfam PF16868 NMT1-like family 29 318 8.1E-97 T 14-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family PhaeoP54_00849 82adcc0bd98c9340ddddb46d6e67c845 749 Gene3D G3DSA:3.40.1360.10 244 370 1.6E-38 T 14-10-2018 PhaeoP54_00849 82adcc0bd98c9340ddddb46d6e67c845 749 SUPERFAMILY SSF57783 2 104 1.38E-29 T 14-10-2018 PhaeoP54_00849 82adcc0bd98c9340ddddb46d6e67c845 749 Pfam PF13662 Toprim domain 263 330 1.1E-13 T 14-10-2018 IPR006171 TOPRIM domain PhaeoP54_00849 82adcc0bd98c9340ddddb46d6e67c845 749 Pfam PF01807 CHC2 zinc finger 7 103 7.3E-27 T 14-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 PhaeoP54_00849 82adcc0bd98c9340ddddb46d6e67c845 749 SUPERFAMILY SSF56731 117 420 1.39E-100 T 14-10-2018 PhaeoP54_00849 82adcc0bd98c9340ddddb46d6e67c845 749 Gene3D G3DSA:3.90.980.10 110 243 5.0E-41 T 14-10-2018 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily PhaeoP54_00849 82adcc0bd98c9340ddddb46d6e67c845 749 Pfam PF10410 DnaB-helicase binding domain of primase 375 418 1.4E-4 T 14-10-2018 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 PhaeoP54_00849 82adcc0bd98c9340ddddb46d6e67c845 749 Hamap MF_00974 DNA primase [dnaG]. 2 724 24.432 T 14-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 PhaeoP54_00849 82adcc0bd98c9340ddddb46d6e67c845 749 Pfam PF08275 DNA primase catalytic core, N-terminal domain 127 251 2.2E-40 T 14-10-2018 IPR013264 DNA primase, catalytic core, N-terminal PhaeoP54_00849 82adcc0bd98c9340ddddb46d6e67c845 749 Gene3D G3DSA:3.90.580.10 1 104 2.6E-31 T 14-10-2018 IPR036977 DNA Primase, CHC2-type zinc finger GO:0003677|GO:0006260|GO:0008270 PhaeoP54_00849 82adcc0bd98c9340ddddb46d6e67c845 749 SMART SM00493 262 333 5.4E-12 T 14-10-2018 IPR006171 TOPRIM domain PhaeoP54_00849 82adcc0bd98c9340ddddb46d6e67c845 749 TIGRFAM TIGR01391 dnaG: DNA primase 5 420 1.3E-121 T 14-10-2018 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 PhaeoP54_00849 82adcc0bd98c9340ddddb46d6e67c845 749 SMART SM00400 39 93 2.0E-25 T 14-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 PhaeoP54_01295 237d6a9d7ff85123d12bb5f9940bd647 445 Gene3D G3DSA:1.10.760.10 32 235 1.5E-20 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PhaeoP54_01295 237d6a9d7ff85123d12bb5f9940bd647 445 Pfam PF03150 Di-haem cytochrome c peroxidase 38 249 5.2E-34 T 14-10-2018 IPR004852 Di-haem cytochrome c peroxidase GO:0016491|GO:0055114 PhaeoP54_01295 237d6a9d7ff85123d12bb5f9940bd647 445 SUPERFAMILY SSF46626 28 234 6.59E-32 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PhaeoP54_01295 237d6a9d7ff85123d12bb5f9940bd647 445 Gene3D G3DSA:1.10.760.10 237 433 1.1E-40 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PhaeoP54_01295 237d6a9d7ff85123d12bb5f9940bd647 445 SUPERFAMILY SSF46626 226 419 1.87E-32 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PhaeoP54_02584 a9b74563181b5bf4179d06c0d11a6a52 274 SUPERFAMILY SSF46785 45 104 8.79E-6 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_02584 a9b74563181b5bf4179d06c0d11a6a52 274 PIRSF PIRSF020623 193 261 1.9E-9 T 14-10-2018 IPR011965 Phenylacetic acid degradation operon negative regulatory protein PaaX GO:0006351 PhaeoP54_02584 a9b74563181b5bf4179d06c0d11a6a52 274 PIRSF PIRSF020623 6 133 5.7E-20 T 14-10-2018 IPR011965 Phenylacetic acid degradation operon negative regulatory protein PaaX GO:0006351 PhaeoP54_02584 a9b74563181b5bf4179d06c0d11a6a52 274 Gene3D G3DSA:1.10.10.10 22 105 4.4E-76 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_02584 a9b74563181b5bf4179d06c0d11a6a52 274 Pfam PF07848 PaaX-like protein 25 89 1.1E-14 T 14-10-2018 IPR012906 PaaX-like, N-terminal PhaeoP54_02584 a9b74563181b5bf4179d06c0d11a6a52 274 Gene3D G3DSA:1.20.58.1460 20 255 4.4E-76 T 14-10-2018 PhaeoP54_02584 a9b74563181b5bf4179d06c0d11a6a52 274 Pfam PF08223 PaaX-like protein C-terminal domain 202 257 2.5E-9 T 14-10-2018 IPR013225 PaaX-like, C-terminal PhaeoP54_02584 a9b74563181b5bf4179d06c0d11a6a52 274 Gene3D G3DSA:3.30.70.2670 106 167 4.4E-76 T 14-10-2018 PhaeoP54_01080 4ef5752397591444ef1f140e839c3d24 408 Gene3D G3DSA:3.50.50.60 8 343 2.1E-98 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PhaeoP54_01080 4ef5752397591444ef1f140e839c3d24 408 SUPERFAMILY SSF51905 7 360 5.18E-57 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PhaeoP54_01080 4ef5752397591444ef1f140e839c3d24 408 Pfam PF01494 FAD binding domain 7 341 5.6E-33 T 14-10-2018 IPR002938 FAD-binding domain GO:0071949 PhaeoP54_01080 4ef5752397591444ef1f140e839c3d24 408 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 7 29 4.7E-18 T 14-10-2018 PhaeoP54_01080 4ef5752397591444ef1f140e839c3d24 408 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 150 165 4.7E-18 T 14-10-2018 PhaeoP54_01080 4ef5752397591444ef1f140e839c3d24 408 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 279 294 4.7E-18 T 14-10-2018 PhaeoP54_01080 4ef5752397591444ef1f140e839c3d24 408 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 294 310 4.7E-18 T 14-10-2018 PhaeoP54_01080 4ef5752397591444ef1f140e839c3d24 408 Gene3D G3DSA:3.30.9.30 40 350 2.1E-98 T 14-10-2018 PhaeoP54_01080 4ef5752397591444ef1f140e839c3d24 408 SUPERFAMILY SSF54373 175 269 6.67E-15 T 14-10-2018 PhaeoP54_02219 27ef42b33b208557158473a795bc72e2 412 SUPERFAMILY SSF53633 4 247 1.7E-67 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily PhaeoP54_02219 27ef42b33b208557158473a795bc72e2 412 Gene3D G3DSA:3.40.1160.10 1 257 9.0E-78 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily PhaeoP54_02219 27ef42b33b208557158473a795bc72e2 412 SUPERFAMILY SSF55021 335 409 5.44E-24 T 14-10-2018 PhaeoP54_02219 27ef42b33b208557158473a795bc72e2 412 SUPERFAMILY SSF55021 251 332 1.09E-18 T 14-10-2018 PhaeoP54_02219 27ef42b33b208557158473a795bc72e2 412 Pfam PF01842 ACT domain 272 328 1.3E-13 T 14-10-2018 IPR002912 ACT domain PhaeoP54_02219 27ef42b33b208557158473a795bc72e2 412 Gene3D G3DSA:3.30.70.260 264 343 1.3E-57 T 14-10-2018 PhaeoP54_02219 27ef42b33b208557158473a795bc72e2 412 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 3 408 8.1E-127 T 14-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 PhaeoP54_02219 27ef42b33b208557158473a795bc72e2 412 Pfam PF13840 ACT domain 341 404 4.8E-17 T 14-10-2018 IPR027795 CASTOR, ACT domain PhaeoP54_02219 27ef42b33b208557158473a795bc72e2 412 Gene3D G3DSA:3.30.70.260 258 408 1.3E-57 T 14-10-2018 PhaeoP54_02219 27ef42b33b208557158473a795bc72e2 412 ProSitePatterns PS00324 Aspartokinase signature. 5 13 - T 14-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 PhaeoP54_02219 27ef42b33b208557158473a795bc72e2 412 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 62 407 2.0E-114 T 14-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 PhaeoP54_02219 27ef42b33b208557158473a795bc72e2 412 Pfam PF00696 Amino acid kinase family 3 230 6.6E-43 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 PhaeoP54_02219 27ef42b33b208557158473a795bc72e2 412 PIRSF PIRSF000726 1 62 2.3E-15 T 14-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 PhaeoP54_02219 27ef42b33b208557158473a795bc72e2 412 PIRSF PIRSF000726 54 412 1.2E-126 T 14-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 PhaeoP54_00932 48b7d36b5df44d93e58c1ae6bb606152 465 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 14 457 4.3E-154 T 14-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 PhaeoP54_00932 48b7d36b5df44d93e58c1ae6bb606152 465 SUPERFAMILY SSF51984 13 98 1.44E-27 T 14-10-2018 PhaeoP54_00932 48b7d36b5df44d93e58c1ae6bb606152 465 Gene3D G3DSA:3.90.190.20 316 464 1.2E-45 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 PhaeoP54_00932 48b7d36b5df44d93e58c1ae6bb606152 465 Pfam PF08245 Mur ligase middle domain 116 298 8.7E-28 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 PhaeoP54_00932 48b7d36b5df44d93e58c1ae6bb606152 465 SUPERFAMILY SSF53623 97 316 1.14E-66 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 PhaeoP54_00932 48b7d36b5df44d93e58c1ae6bb606152 465 Gene3D G3DSA:3.40.50.720 13 99 1.6E-31 T 14-10-2018 PhaeoP54_00932 48b7d36b5df44d93e58c1ae6bb606152 465 Gene3D G3DSA:3.40.1190.10 100 315 6.7E-71 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 PhaeoP54_00932 48b7d36b5df44d93e58c1ae6bb606152 465 Pfam PF02875 Mur ligase family, glutamate ligase domain 318 403 6.5E-19 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 PhaeoP54_00932 48b7d36b5df44d93e58c1ae6bb606152 465 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 11 465 40.458 T 14-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 PhaeoP54_00932 48b7d36b5df44d93e58c1ae6bb606152 465 SUPERFAMILY SSF53244 317 462 8.61E-45 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 PhaeoP54_00932 48b7d36b5df44d93e58c1ae6bb606152 465 Pfam PF01225 Mur ligase family, catalytic domain 14 110 3.5E-29 T 14-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 PhaeoP54_03552 c5b49d225d54fdc1bd9eef63bedc3b6e 531 Gene3D G3DSA:3.30.70.260 454 527 9.6E-18 T 14-10-2018 PhaeoP54_03552 c5b49d225d54fdc1bd9eef63bedc3b6e 531 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 194 216 - T 14-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site PhaeoP54_03552 c5b49d225d54fdc1bd9eef63bedc3b6e 531 SUPERFAMILY SSF51735 102 284 9.38E-58 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PhaeoP54_03552 c5b49d225d54fdc1bd9eef63bedc3b6e 531 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 109 283 3.0E-62 T 14-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 PhaeoP54_03552 c5b49d225d54fdc1bd9eef63bedc3b6e 531 Pfam PF01842 ACT domain 456 516 1.6E-7 T 14-10-2018 IPR002912 ACT domain PhaeoP54_03552 c5b49d225d54fdc1bd9eef63bedc3b6e 531 Gene3D G3DSA:3.30.1330.90 321 453 3.3E-29 T 14-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 PhaeoP54_03552 c5b49d225d54fdc1bd9eef63bedc3b6e 531 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 223 239 - T 14-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site PhaeoP54_03552 c5b49d225d54fdc1bd9eef63bedc3b6e 531 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 5 315 8.0E-35 T 14-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 PhaeoP54_03552 c5b49d225d54fdc1bd9eef63bedc3b6e 531 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 146 173 - T 14-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 PhaeoP54_03552 c5b49d225d54fdc1bd9eef63bedc3b6e 531 TIGRFAM TIGR01327 PGDH: phosphoglycerate dehydrogenase 4 524 7.7E-199 T 14-10-2018 IPR006236 D-3-phosphoglycerate dehydrogenase GO:0004617|GO:0006564 KEGG: 00260+1.1.1.95|KEGG: 00680+1.1.1.95|Reactome: R-HSA-977347 PhaeoP54_03552 c5b49d225d54fdc1bd9eef63bedc3b6e 531 SUPERFAMILY SSF55021 445 524 7.5E-16 T 14-10-2018 PhaeoP54_03552 c5b49d225d54fdc1bd9eef63bedc3b6e 531 Gene3D G3DSA:3.40.50.720 96 285 4.4E-118 T 14-10-2018 PhaeoP54_03552 c5b49d225d54fdc1bd9eef63bedc3b6e 531 Gene3D G3DSA:3.40.50.720 5 294 4.4E-118 T 14-10-2018 PhaeoP54_03552 c5b49d225d54fdc1bd9eef63bedc3b6e 531 SUPERFAMILY SSF52283 3 129 4.54E-37 T 14-10-2018 PhaeoP54_03552 c5b49d225d54fdc1bd9eef63bedc3b6e 531 SUPERFAMILY SSF143548 321 450 8.63E-33 T 14-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 PhaeoP54_01467 7fddccb87277c7209158264e7f993cc9 471 Gene3D G3DSA:3.40.50.2300 3 119 6.9E-36 T 14-10-2018 PhaeoP54_01467 7fddccb87277c7209158264e7f993cc9 471 Gene3D G3DSA:1.10.8.60 309 388 6.8E-23 T 14-10-2018 PhaeoP54_01467 7fddccb87277c7209158264e7f993cc9 471 SMART SM00448 2 115 1.9E-31 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PhaeoP54_01467 7fddccb87277c7209158264e7f993cc9 471 Pfam PF00072 Response regulator receiver domain 4 115 7.8E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PhaeoP54_01467 7fddccb87277c7209158264e7f993cc9 471 SUPERFAMILY SSF46689 350 449 2.69E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PhaeoP54_01467 7fddccb87277c7209158264e7f993cc9 471 Gene3D G3DSA:3.40.50.300 120 308 4.0E-51 T 14-10-2018 PhaeoP54_01467 7fddccb87277c7209158264e7f993cc9 471 SMART SM00382 161 300 1.5E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_01467 7fddccb87277c7209158264e7f993cc9 471 SUPERFAMILY SSF52172 3 185 4.98E-40 T 14-10-2018 IPR011006 CheY-like superfamily PhaeoP54_01467 7fddccb87277c7209158264e7f993cc9 471 Gene3D G3DSA:1.10.10.60 394 451 6.8E-14 T 14-10-2018 PhaeoP54_01467 7fddccb87277c7209158264e7f993cc9 471 Pfam PF02954 Bacterial regulatory protein, Fis family 407 445 5.4E-10 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PhaeoP54_01467 7fddccb87277c7209158264e7f993cc9 471 SUPERFAMILY SSF52540 140 380 7.62E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_01467 7fddccb87277c7209158264e7f993cc9 471 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 350 359 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site PhaeoP54_01467 7fddccb87277c7209158264e7f993cc9 471 Pfam PF00158 Sigma-54 interaction domain 141 303 7.9E-49 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 PhaeoP54_02266 ab4290860f5db56e63c53a0ca3e51d4f 298 Pfam PF03466 LysR substrate binding domain 91 296 1.8E-33 T 14-10-2018 IPR005119 LysR, substrate-binding PhaeoP54_02266 ab4290860f5db56e63c53a0ca3e51d4f 298 Gene3D G3DSA:3.40.190.10 166 268 1.4E-45 T 14-10-2018 PhaeoP54_02266 ab4290860f5db56e63c53a0ca3e51d4f 298 Gene3D G3DSA:1.10.10.10 5 91 5.8E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_02266 ab4290860f5db56e63c53a0ca3e51d4f 298 SUPERFAMILY SSF46785 5 90 8.44E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_02266 ab4290860f5db56e63c53a0ca3e51d4f 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 65 9.9E-16 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PhaeoP54_02266 ab4290860f5db56e63c53a0ca3e51d4f 298 Gene3D G3DSA:3.40.190.10 93 293 1.4E-45 T 14-10-2018 PhaeoP54_02266 ab4290860f5db56e63c53a0ca3e51d4f 298 SUPERFAMILY SSF53850 91 296 3.26E-33 T 14-10-2018 PhaeoP54_02970 ba3e66d51bfb4d39c585cd8e1d1e1784 301 Pfam PF08443 RimK-like ATP-grasp domain 98 286 2.7E-68 T 14-10-2018 IPR013651 ATP-grasp fold, RimK-type Reactome: R-HSA-70614 PhaeoP54_02970 ba3e66d51bfb4d39c585cd8e1d1e1784 301 Gene3D G3DSA:3.30.1490.20 115 181 8.4E-24 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 PhaeoP54_02970 ba3e66d51bfb4d39c585cd8e1d1e1784 301 Gene3D G3DSA:3.40.50.20 1 114 9.2E-39 T 14-10-2018 PhaeoP54_02970 ba3e66d51bfb4d39c585cd8e1d1e1784 301 Hamap MF_01552 Ribosomal protein S6--L-glutamate ligase [rimK]. 1 295 51.729 T 14-10-2018 IPR023533 Ribosomal protein S6--L-glutamate ligase RimK PhaeoP54_02970 ba3e66d51bfb4d39c585cd8e1d1e1784 301 Gene3D G3DSA:3.30.470.80 182 299 5.4E-43 T 14-10-2018 PhaeoP54_02970 ba3e66d51bfb4d39c585cd8e1d1e1784 301 SUPERFAMILY SSF56059 98 288 2.79E-47 T 14-10-2018 PhaeoP54_02970 ba3e66d51bfb4d39c585cd8e1d1e1784 301 TIGRFAM TIGR00768 rimK_fam: alpha-L-glutamate ligase, RimK family 2 286 1.4E-85 T 14-10-2018 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX GO:0006464 Reactome: R-HSA-70614 PhaeoP54_04066 d24cd11abdb2931f261af89ec1c1dd56 624 Pfam PF02719 Polysaccharide biosynthesis protein 284 574 8.1E-116 T 14-10-2018 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain PhaeoP54_04066 d24cd11abdb2931f261af89ec1c1dd56 624 SUPERFAMILY SSF51735 282 553 4.26E-56 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PhaeoP54_04066 d24cd11abdb2931f261af89ec1c1dd56 624 SUPERFAMILY SSF53335 113 328 9.63E-18 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PhaeoP54_04066 d24cd11abdb2931f261af89ec1c1dd56 624 Gene3D G3DSA:3.40.50.720 144 265 1.0E-25 T 14-10-2018 PhaeoP54_04066 d24cd11abdb2931f261af89ec1c1dd56 624 Pfam PF13727 CoA-binding domain 95 233 2.2E-10 T 14-10-2018 PhaeoP54_04066 d24cd11abdb2931f261af89ec1c1dd56 624 Gene3D G3DSA:3.40.50.720 279 602 1.0E-107 T 14-10-2018 PhaeoP54_03222 bd468087c5c94748fa0ae44d1ba9a70f 160 Pfam PF01252 Signal peptidase (SPase) II 10 151 1.2E-33 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 PhaeoP54_03222 bd468087c5c94748fa0ae44d1ba9a70f 160 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 1 160 14.103 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 PhaeoP54_03222 bd468087c5c94748fa0ae44d1ba9a70f 160 TIGRFAM TIGR00077 lspA: signal peptidase II 5 151 4.3E-30 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 PhaeoP54_03222 bd468087c5c94748fa0ae44d1ba9a70f 160 ProSitePatterns PS00855 Signal peptidases II signature. 101 113 - T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 PhaeoP54_03222 bd468087c5c94748fa0ae44d1ba9a70f 160 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 135 151 1.6E-13 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 PhaeoP54_03222 bd468087c5c94748fa0ae44d1ba9a70f 160 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 98 113 1.6E-13 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 PhaeoP54_03222 bd468087c5c94748fa0ae44d1ba9a70f 160 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 50 58 1.6E-13 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 PhaeoP54_01376 8bcacc44018f80dd0f99ec5d2dc81254 829 SUPERFAMILY SSF82689 670 769 1.57E-30 T 14-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 PhaeoP54_01376 8bcacc44018f80dd0f99ec5d2dc81254 829 SUPERFAMILY SSF82861 518 600 4.58E-12 T 14-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 PhaeoP54_01376 8bcacc44018f80dd0f99ec5d2dc81254 829 Pfam PF12607 Protein of unknown function (DUF3772) 131 188 1.5E-17 T 14-10-2018 IPR022249 Domain of unknown function DUF3772 PhaeoP54_01376 8bcacc44018f80dd0f99ec5d2dc81254 829 SUPERFAMILY SSF50182 602 667 1.77E-18 T 14-10-2018 IPR010920 LSM domain superfamily PhaeoP54_01376 8bcacc44018f80dd0f99ec5d2dc81254 829 Gene3D G3DSA:3.30.70.100 670 762 1.3E-25 T 14-10-2018 PhaeoP54_01376 8bcacc44018f80dd0f99ec5d2dc81254 829 Gene3D G3DSA:2.30.30.60 617 666 1.7E-14 T 14-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily PhaeoP54_01376 8bcacc44018f80dd0f99ec5d2dc81254 829 Pfam PF00924 Mechanosensitive ion channel 563 758 6.5E-57 T 14-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 PhaeoP54_03454 db6312c32c14e6b199655235f29eadb5 245 Gene3D G3DSA:3.30.420.10 2 184 8.6E-48 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 PhaeoP54_03454 db6312c32c14e6b199655235f29eadb5 245 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 3 183 4.9E-44 T 14-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PhaeoP54_03454 db6312c32c14e6b199655235f29eadb5 245 SMART SM00479 2 185 2.9E-36 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III PhaeoP54_03454 db6312c32c14e6b199655235f29eadb5 245 TIGRFAM TIGR01406 dnaQ_proteo: DNA polymerase III, epsilon subunit 2 241 1.6E-79 T 14-10-2018 IPR006309 DNA polymerase 3, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PhaeoP54_03454 db6312c32c14e6b199655235f29eadb5 245 SUPERFAMILY SSF53098 1 182 6.4E-49 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily PhaeoP54_03454 db6312c32c14e6b199655235f29eadb5 245 Pfam PF00929 Exonuclease 4 176 8.3E-29 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III PhaeoP54_01788 329737d6ea65ee05bbcf6c990b570f45 245 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 PhaeoP54_01788 329737d6ea65ee05bbcf6c990b570f45 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 1.9E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_01788 329737d6ea65ee05bbcf6c990b570f45 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 1.9E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_01788 329737d6ea65ee05bbcf6c990b570f45 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 1.9E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_01788 329737d6ea65ee05bbcf6c990b570f45 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 3.4E-49 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_01788 329737d6ea65ee05bbcf6c990b570f45 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 3.4E-49 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_01788 329737d6ea65ee05bbcf6c990b570f45 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 3.4E-49 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_01788 329737d6ea65ee05bbcf6c990b570f45 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 3.4E-49 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_01788 329737d6ea65ee05bbcf6c990b570f45 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 206 226 3.4E-49 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_01788 329737d6ea65ee05bbcf6c990b570f45 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 3.4E-49 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_01788 329737d6ea65ee05bbcf6c990b570f45 245 SUPERFAMILY SSF51735 6 244 2.11E-86 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PhaeoP54_01788 329737d6ea65ee05bbcf6c990b570f45 245 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 242 6.5E-68 T 14-10-2018 PhaeoP54_01788 329737d6ea65ee05bbcf6c990b570f45 245 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 9 243 4.2E-97 T 14-10-2018 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 PhaeoP54_01788 329737d6ea65ee05bbcf6c990b570f45 245 Gene3D G3DSA:3.40.50.720 1 245 2.6E-87 T 14-10-2018 PhaeoP54_01788 329737d6ea65ee05bbcf6c990b570f45 245 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 188 2.2E-7 T 14-10-2018 PhaeoP54_01049 321ef494c024f6a86fa6c06740889e3f 260 SUPERFAMILY SSF64167 1 257 6.93E-71 T 14-10-2018 PhaeoP54_01049 321ef494c024f6a86fa6c06740889e3f 260 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 1 260 31.676 T 14-10-2018 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 PhaeoP54_01049 321ef494c024f6a86fa6c06740889e3f 260 Pfam PF01975 Survival protein SurE 3 193 1.8E-49 T 14-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 PhaeoP54_01049 321ef494c024f6a86fa6c06740889e3f 260 Gene3D G3DSA:3.40.1210.10 1 259 1.1E-74 T 14-10-2018 IPR036523 SurE-like phosphatase/nucleotidase superfamily GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 PhaeoP54_01049 321ef494c024f6a86fa6c06740889e3f 260 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 1 248 5.9E-55 T 14-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 PhaeoP54_03032 8d334bde4bed648753f36f33df7995c9 280 SMART SM01383 42 118 7.7E-47 T 14-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PhaeoP54_03032 8d334bde4bed648753f36f33df7995c9 280 SMART SM01382 124 252 8.0E-90 T 14-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 PhaeoP54_03032 8d334bde4bed648753f36f33df7995c9 280 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 274 46.598 T 14-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 PhaeoP54_03032 8d334bde4bed648753f36f33df7995c9 280 SUPERFAMILY SSF50249 2 125 1.89E-49 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold PhaeoP54_03032 8d334bde4bed648753f36f33df7995c9 280 ProSitePatterns PS00467 Ribosomal protein L2 signature. 218 229 - T 14-10-2018 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PhaeoP54_03032 8d334bde4bed648753f36f33df7995c9 280 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 3 274 5.0E-128 T 14-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 PhaeoP54_03032 8d334bde4bed648753f36f33df7995c9 280 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 125 250 6.8E-56 T 14-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 PhaeoP54_03032 8d334bde4bed648753f36f33df7995c9 280 Gene3D G3DSA:2.40.50.140 1 114 8.5E-48 T 14-10-2018 PhaeoP54_03032 8d334bde4bed648753f36f33df7995c9 280 SUPERFAMILY SSF50104 126 271 6.62E-60 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily PhaeoP54_03032 8d334bde4bed648753f36f33df7995c9 280 Gene3D G3DSA:4.10.950.10 197 275 1.2E-33 T 14-10-2018 IPR014726 Ribosomal protein L2, domain 3 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PhaeoP54_03032 8d334bde4bed648753f36f33df7995c9 280 Gene3D G3DSA:2.30.30.30 118 196 2.1E-32 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 PhaeoP54_03032 8d334bde4bed648753f36f33df7995c9 280 PIRSF PIRSF002158 4 276 2.5E-98 T 14-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PhaeoP54_03032 8d334bde4bed648753f36f33df7995c9 280 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 117 6.7E-33 T 14-10-2018 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 PhaeoP54_03370 10fad39cce6659b80ca3dab1b59539a9 188 Gene3D G3DSA:1.10.260.40 6 81 2.0E-19 T 14-10-2018 PhaeoP54_03370 10fad39cce6659b80ca3dab1b59539a9 188 SUPERFAMILY SSF47413 8 75 4.5E-18 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 PhaeoP54_03370 10fad39cce6659b80ca3dab1b59539a9 188 SMART SM00530 15 70 1.7E-16 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PhaeoP54_03370 10fad39cce6659b80ca3dab1b59539a9 188 Pfam PF01381 Helix-turn-helix 16 69 3.4E-16 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PhaeoP54_03370 10fad39cce6659b80ca3dab1b59539a9 188 SUPERFAMILY SSF51182 63 186 1.93E-22 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily PhaeoP54_03370 10fad39cce6659b80ca3dab1b59539a9 188 Gene3D G3DSA:2.60.120.10 98 188 6.1E-19 T 14-10-2018 IPR014710 RmlC-like jelly roll fold PhaeoP54_00954 8bcb9912ddb90e756350a62da4963893 504 SUPERFAMILY SSF55931 22 324 8.5E-111 T 14-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 PhaeoP54_00954 8bcb9912ddb90e756350a62da4963893 504 Hamap MF_00121 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B [gatB]. 20 503 36.137 T 14-10-2018 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 PhaeoP54_00954 8bcb9912ddb90e756350a62da4963893 504 Pfam PF02637 GatB domain 357 502 7.4E-46 T 14-10-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 PhaeoP54_00954 8bcb9912ddb90e756350a62da4963893 504 Gene3D G3DSA:1.10.10.410 443 504 3.3E-19 T 14-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal PhaeoP54_00954 8bcb9912ddb90e756350a62da4963893 504 TIGRFAM TIGR00133 gatB: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit 20 502 1.1E-152 T 14-10-2018 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 PhaeoP54_00954 8bcb9912ddb90e756350a62da4963893 504 Pfam PF02934 GatB/GatE catalytic domain 23 316 1.9E-109 T 14-10-2018 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic GO:0016874 PhaeoP54_00954 8bcb9912ddb90e756350a62da4963893 504 Gene3D G3DSA:1.10.150.380 325 442 1.3E-34 T 14-10-2018 PhaeoP54_00954 8bcb9912ddb90e756350a62da4963893 504 SMART SM00845 356 502 8.6E-74 T 14-10-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 PhaeoP54_00954 8bcb9912ddb90e756350a62da4963893 504 SUPERFAMILY SSF89095 325 431 5.67E-31 T 14-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 PhaeoP54_01371 5d4475e4b258f809f2f35ee642a38446 479 Pfam PF03441 FAD binding domain of DNA photolyase 275 472 1.7E-65 T 14-10-2018 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-400253 PhaeoP54_01371 5d4475e4b258f809f2f35ee642a38446 479 Gene3D G3DSA:1.25.40.80 133 289 5.0E-85 T 14-10-2018 PhaeoP54_01371 5d4475e4b258f809f2f35ee642a38446 479 Pfam PF00875 DNA photolyase 12 162 3.3E-46 T 14-10-2018 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-400253 PhaeoP54_01371 5d4475e4b258f809f2f35ee642a38446 479 SUPERFAMILY SSF52425 8 192 1.01E-52 T 14-10-2018 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily Reactome: R-HSA-400253 PhaeoP54_01371 5d4475e4b258f809f2f35ee642a38446 479 Gene3D G3DSA:3.40.50.620 12 208 5.0E-85 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PhaeoP54_01371 5d4475e4b258f809f2f35ee642a38446 479 SUPERFAMILY SSF48173 202 473 8.76E-94 T 14-10-2018 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily Reactome: R-HSA-400253 PhaeoP54_01371 5d4475e4b258f809f2f35ee642a38446 479 Gene3D G3DSA:1.10.579.10 293 476 1.1E-58 T 14-10-2018 PhaeoP54_01371 5d4475e4b258f809f2f35ee642a38446 479 PRINTS PR00147 DNA photolyase signature 325 341 3.5E-20 T 14-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 PhaeoP54_01371 5d4475e4b258f809f2f35ee642a38446 479 PRINTS PR00147 DNA photolyase signature 384 398 3.5E-20 T 14-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 PhaeoP54_01371 5d4475e4b258f809f2f35ee642a38446 479 PRINTS PR00147 DNA photolyase signature 144 160 3.5E-20 T 14-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 PhaeoP54_01371 5d4475e4b258f809f2f35ee642a38446 479 PRINTS PR00147 DNA photolyase signature 345 363 3.5E-20 T 14-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 PhaeoP54_02163 f7ed88f60004ee4d2925c6b2daf22ed3 429 TIGRFAM TIGR01537 portal_HK97: phage portal protein, HK97 family 64 406 4.6E-42 T 14-10-2018 IPR006427 Phage portal protein, HK97 PhaeoP54_02163 f7ed88f60004ee4d2925c6b2daf22ed3 429 Pfam PF04860 Phage portal protein 73 400 2.1E-59 T 14-10-2018 IPR006944 Bacteriophage/Gene transfer agent portal protein PhaeoP54_02353 cce30e5f58c499dd618f7da20e13ae95 112 Pfam PF01588 Putative tRNA binding domain 14 108 8.6E-14 T 14-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 PhaeoP54_02353 cce30e5f58c499dd618f7da20e13ae95 112 TIGRFAM TIGR02222 chap_CsaA: export-related chaperone protein CsaA 6 111 1.1E-46 T 14-10-2018 IPR008231 Probable chaperone CsaA PhaeoP54_02353 cce30e5f58c499dd618f7da20e13ae95 112 Gene3D G3DSA:2.40.50.140 1 111 2.4E-32 T 14-10-2018 PhaeoP54_02353 cce30e5f58c499dd618f7da20e13ae95 112 SUPERFAMILY SSF50249 4 111 4.41E-32 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold PhaeoP54_02148 8dd152f68a46fdeb7c388e7949573f5d 277 Gene3D G3DSA:2.130.10.10 25 275 2.7E-10 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 PhaeoP54_02148 8dd152f68a46fdeb7c388e7949573f5d 277 SUPERFAMILY SSF63825 39 234 3.92E-13 T 14-10-2018 PhaeoP54_01154 cc7a6287028397d91c5e959dbfc6c109 1158 SUPERFAMILY SSF81935 22 188 1.15E-57 T 14-10-2018 IPR024089 Proline dehydrogenase PutA, domain I/II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 PhaeoP54_01154 cc7a6287028397d91c5e959dbfc6c109 1158 TIGRFAM TIGR01238 D1pyr5carbox3: delta-1-pyrroline-5-carboxylate dehydrogenase 521 999 1.0E-189 T 14-10-2018 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 GO:0003842|GO:0006561|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 PhaeoP54_01154 cc7a6287028397d91c5e959dbfc6c109 1158 PIRSF PIRSF000197 8 1157 0.0 T 14-10-2018 IPR025703 Bifunctional protein PutA GO:0003700|GO:0003842|GO:0004657|GO:0006355|GO:0010133 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 PhaeoP54_01154 cc7a6287028397d91c5e959dbfc6c109 1158 Pfam PF00171 Aldehyde dehydrogenase family 573 999 5.1E-105 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 PhaeoP54_01154 cc7a6287028397d91c5e959dbfc6c109 1158 SUPERFAMILY SSF51730 189 513 5.89E-110 T 14-10-2018 IPR029041 FAD-linked oxidoreductase-like PhaeoP54_01154 cc7a6287028397d91c5e959dbfc6c109 1158 SUPERFAMILY SSF53720 565 1000 1.44E-119 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 PhaeoP54_01154 cc7a6287028397d91c5e959dbfc6c109 1158 Pfam PF14850 DNA-binding domain of Proline dehydrogenase 77 186 1.1E-43 T 14-10-2018 IPR024082 Proline dehydrogenase PutA, domain II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 PhaeoP54_01154 cc7a6287028397d91c5e959dbfc6c109 1158 Pfam PF01619 Proline dehydrogenase 196 490 4.5E-94 T 14-10-2018 IPR002872 Proline dehydrogenase domain KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922|Reactome: R-HSA-70688 PhaeoP54_01154 cc7a6287028397d91c5e959dbfc6c109 1158 Gene3D G3DSA:3.20.20.220 130 526 3.4E-133 T 14-10-2018 PhaeoP54_01154 cc7a6287028397d91c5e959dbfc6c109 1158 Gene3D G3DSA:3.40.309.10 782 971 3.9E-128 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 PhaeoP54_01154 cc7a6287028397d91c5e959dbfc6c109 1158 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 807 818 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 PhaeoP54_01154 cc7a6287028397d91c5e959dbfc6c109 1158 Gene3D G3DSA:3.40.605.10 554 1001 3.9E-128 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 PhaeoP54_01506 30d0429677494179e8d58028b0f5d56b 698 Gene3D G3DSA:2.40.50.570 139 225 1.8E-8 T 14-10-2018 PhaeoP54_01506 30d0429677494179e8d58028b0f5d56b 698 Pfam PF14574 Domain of unknown function (DUF4445) 231 654 4.9E-136 T 14-10-2018 IPR027980 Protein of unknown function DUF4445 PhaeoP54_01506 30d0429677494179e8d58028b0f5d56b 698 Gene3D G3DSA:3.30.420.480 229 408 5.5E-52 T 14-10-2018 PhaeoP54_01506 30d0429677494179e8d58028b0f5d56b 698 Gene3D G3DSA:3.10.20.30 18 130 6.2E-17 T 14-10-2018 IPR012675 Beta-grasp domain superfamily PhaeoP54_01506 30d0429677494179e8d58028b0f5d56b 698 SUPERFAMILY SSF54292 21 128 6.52E-18 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 PhaeoP54_03388 58bfd48eaa8a64b25f68ce932a6b0dc5 229 SUPERFAMILY SSF51197 36 228 1.32E-52 T 14-10-2018 PhaeoP54_03388 58bfd48eaa8a64b25f68ce932a6b0dc5 229 Pfam PF13532 2OG-Fe(II) oxygenase superfamily 41 226 8.8E-48 T 14-10-2018 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like PhaeoP54_03388 58bfd48eaa8a64b25f68ce932a6b0dc5 229 Gene3D G3DSA:2.60.120.590 36 229 1.5E-48 T 14-10-2018 IPR037151 Alpha-ketoglutarate-dependent dioxygenase AlkB-like superfamily PhaeoP54_02800 3ac66225c35d31ab261c8d6a5a2cc703 285 SUPERFAMILY SSF46689 12 62 1.61E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PhaeoP54_02800 3ac66225c35d31ab261c8d6a5a2cc703 285 Gene3D G3DSA:3.30.160.70 109 196 4.1E-12 T 14-10-2018 PhaeoP54_02800 3ac66225c35d31ab261c8d6a5a2cc703 285 Pfam PF12833 Helix-turn-helix domain 34 111 9.5E-17 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PhaeoP54_02800 3ac66225c35d31ab261c8d6a5a2cc703 285 SUPERFAMILY SSF53155 116 195 2.55E-18 T 14-10-2018 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily GO:0003908|GO:0006281 Reactome: R-HSA-5657655 PhaeoP54_02800 3ac66225c35d31ab261c8d6a5a2cc703 285 Gene3D G3DSA:1.10.10.60 13 108 9.3E-18 T 14-10-2018 PhaeoP54_02800 3ac66225c35d31ab261c8d6a5a2cc703 285 Gene3D G3DSA:1.10.10.10 197 279 3.4E-30 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_02800 3ac66225c35d31ab261c8d6a5a2cc703 285 SUPERFAMILY SSF46767 195 273 7.59E-29 T 14-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 PhaeoP54_02800 3ac66225c35d31ab261c8d6a5a2cc703 285 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 196 273 1.8E-29 T 14-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 PhaeoP54_02800 3ac66225c35d31ab261c8d6a5a2cc703 285 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 197 274 1.5E-28 T 14-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 PhaeoP54_02800 3ac66225c35d31ab261c8d6a5a2cc703 285 SMART SM00342 28 110 3.4E-19 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PhaeoP54_03648 d0e7327ae14025ba58857f866de94999 457 Pfam PF02563 Polysaccharide biosynthesis/export protein 107 190 9.0E-13 T 14-10-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 PhaeoP54_03648 d0e7327ae14025ba58857f866de94999 457 Gene3D G3DSA:3.10.560.10 102 277 2.0E-30 T 14-10-2018 PhaeoP54_03648 d0e7327ae14025ba58857f866de94999 457 Gene3D G3DSA:3.10.560.10 325 429 8.2E-18 T 14-10-2018 PhaeoP54_03648 d0e7327ae14025ba58857f866de94999 457 Gene3D G3DSA:3.30.1950.10 112 195 2.0E-30 T 14-10-2018 PhaeoP54_03648 d0e7327ae14025ba58857f866de94999 457 Pfam PF10531 SLBB domain 199 251 0.0024 T 14-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PhaeoP54_00616 73447d4b715f28be4cc7f58e483850d3 213 Pfam PF00106 short chain dehydrogenase 2 175 1.6E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_00616 73447d4b715f28be4cc7f58e483850d3 213 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 135 154 7.7E-16 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_00616 73447d4b715f28be4cc7f58e483850d3 213 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 2 19 7.7E-16 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_00616 73447d4b715f28be4cc7f58e483850d3 213 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 173 7.7E-16 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_00616 73447d4b715f28be4cc7f58e483850d3 213 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 58 69 7.7E-16 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_00616 73447d4b715f28be4cc7f58e483850d3 213 SUPERFAMILY SSF51735 2 211 7.74E-52 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PhaeoP54_00616 73447d4b715f28be4cc7f58e483850d3 213 Gene3D G3DSA:3.40.50.720 1 213 8.4E-52 T 14-10-2018 PhaeoP54_01249 c41c6cd08bae631e7d6db110def20210 147 Pfam PF00072 Response regulator receiver domain 5 116 1.9E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PhaeoP54_01249 c41c6cd08bae631e7d6db110def20210 147 Gene3D G3DSA:3.40.50.12740 1 147 7.6E-37 T 14-10-2018 PhaeoP54_01249 c41c6cd08bae631e7d6db110def20210 147 SUPERFAMILY SSF52172 2 125 1.71E-35 T 14-10-2018 IPR011006 CheY-like superfamily PhaeoP54_01249 c41c6cd08bae631e7d6db110def20210 147 SMART SM00448 3 116 1.2E-34 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PhaeoP54_02698 43cbcf47b3ec47e77d486bc234360dae 363 Gene3D G3DSA:3.30.360.10 121 347 5.2E-23 T 14-10-2018 PhaeoP54_02698 43cbcf47b3ec47e77d486bc234360dae 363 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 2 118 4.3E-25 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 PhaeoP54_02698 43cbcf47b3ec47e77d486bc234360dae 363 Gene3D G3DSA:3.40.50.720 1 120 1.2E-29 T 14-10-2018 PhaeoP54_02698 43cbcf47b3ec47e77d486bc234360dae 363 SUPERFAMILY SSF55347 122 253 8.72E-13 T 14-10-2018 PhaeoP54_02698 43cbcf47b3ec47e77d486bc234360dae 363 SUPERFAMILY SSF51735 2 147 3.57E-40 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PhaeoP54_01287 fb4f07486a232c54408ac890c4b17868 236 Pfam PF00392 Bacterial regulatory proteins, gntR family 13 76 2.0E-14 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PhaeoP54_01287 fb4f07486a232c54408ac890c4b17868 236 SUPERFAMILY SSF64288 64 235 2.2E-23 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily PhaeoP54_01287 fb4f07486a232c54408ac890c4b17868 236 SUPERFAMILY SSF46785 10 84 4.74E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_01287 fb4f07486a232c54408ac890c4b17868 236 Gene3D G3DSA:3.40.1410.10 99 231 5.3E-15 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily PhaeoP54_01287 fb4f07486a232c54408ac890c4b17868 236 SMART SM00866 95 230 1.2E-10 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 PhaeoP54_01287 fb4f07486a232c54408ac890c4b17868 236 SMART SM00345 17 76 3.7E-10 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PhaeoP54_01287 fb4f07486a232c54408ac890c4b17868 236 Gene3D G3DSA:1.10.10.10 9 93 8.4E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_01287 fb4f07486a232c54408ac890c4b17868 236 Pfam PF07702 UTRA domain 101 228 1.3E-17 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 PhaeoP54_00455 1a745af090a9832cba8e7bffe5732892 201 TIGRFAM TIGR00017 cmk: cytidylate kinase 66 196 1.4E-40 T 14-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 PhaeoP54_00455 1a745af090a9832cba8e7bffe5732892 201 Pfam PF02224 Cytidylate kinase 65 197 9.5E-41 T 14-10-2018 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 PhaeoP54_00455 1a745af090a9832cba8e7bffe5732892 201 Pfam PF02224 Cytidylate kinase 5 45 1.6E-10 T 14-10-2018 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 PhaeoP54_00455 1a745af090a9832cba8e7bffe5732892 201 Gene3D G3DSA:3.40.50.300 1 201 5.0E-60 T 14-10-2018 PhaeoP54_00455 1a745af090a9832cba8e7bffe5732892 201 SUPERFAMILY SSF52540 2 200 7.2E-37 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_00455 1a745af090a9832cba8e7bffe5732892 201 Hamap MF_00238 Cytidylate kinase [cmk]. 3 201 29.899 T 14-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 PhaeoP54_00360 94ae9b0b21097e61f34f503af8f25b6f 213 PRINTS PR01549 Autoinducer synthesis protein signature 64 82 1.0E-12 T 14-10-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 PhaeoP54_00360 94ae9b0b21097e61f34f503af8f25b6f 213 PRINTS PR01549 Autoinducer synthesis protein signature 40 62 1.0E-12 T 14-10-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 PhaeoP54_00360 94ae9b0b21097e61f34f503af8f25b6f 213 PRINTS PR01549 Autoinducer synthesis protein signature 136 157 1.0E-12 T 14-10-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 PhaeoP54_00360 94ae9b0b21097e61f34f503af8f25b6f 213 PRINTS PR01549 Autoinducer synthesis protein signature 19 38 1.0E-12 T 14-10-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 PhaeoP54_00360 94ae9b0b21097e61f34f503af8f25b6f 213 PRINTS PR01549 Autoinducer synthesis protein signature 96 108 1.0E-12 T 14-10-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 PhaeoP54_00360 94ae9b0b21097e61f34f503af8f25b6f 213 Pfam PF00765 Autoinducer synthase 10 171 2.0E-23 T 14-10-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 PhaeoP54_00360 94ae9b0b21097e61f34f503af8f25b6f 213 Gene3D G3DSA:3.40.630.30 1 196 2.2E-36 T 14-10-2018 PhaeoP54_00360 94ae9b0b21097e61f34f503af8f25b6f 213 SUPERFAMILY SSF55729 1 184 6.14E-31 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase PhaeoP54_00612 45447d72390742744d82587fc75c75bb 201 Pfam PF01613 Flavin reductase like domain 22 164 2.0E-17 T 14-10-2018 IPR002563 Flavin reductase like domain GO:0010181 PhaeoP54_00612 45447d72390742744d82587fc75c75bb 201 SMART SM00903 18 173 3.4E-14 T 14-10-2018 IPR002563 Flavin reductase like domain GO:0010181 PhaeoP54_00612 45447d72390742744d82587fc75c75bb 201 Gene3D G3DSA:2.30.110.10 11 201 3.8E-64 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 PhaeoP54_00612 45447d72390742744d82587fc75c75bb 201 SUPERFAMILY SSF50475 1 196 1.28E-51 T 14-10-2018 PhaeoP54_01466 034f410eab95d8c85fd961e14822a897 759 SUPERFAMILY SSF55874 576 742 4.06E-28 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PhaeoP54_01466 034f410eab95d8c85fd961e14822a897 759 SUPERFAMILY SSF47384 507 581 3.14E-11 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 PhaeoP54_01466 034f410eab95d8c85fd961e14822a897 759 Pfam PF00512 His Kinase A (phospho-acceptor) domain 513 580 6.9E-10 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PhaeoP54_01466 034f410eab95d8c85fd961e14822a897 759 Pfam PF00672 HAMP domain 329 377 6.9E-13 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 PhaeoP54_01466 034f410eab95d8c85fd961e14822a897 759 Pfam PF00989 PAS fold 397 500 1.8E-10 T 14-10-2018 IPR013767 PAS fold GO:0006355 PhaeoP54_01466 034f410eab95d8c85fd961e14822a897 759 SUPERFAMILY SSF55785 388 501 3.49E-11 T 14-10-2018 IPR035965 PAS domain superfamily PhaeoP54_01466 034f410eab95d8c85fd961e14822a897 759 Gene3D G3DSA:3.30.565.10 582 755 6.2E-29 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PhaeoP54_01466 034f410eab95d8c85fd961e14822a897 759 Gene3D G3DSA:1.20.1480.50 300 385 2.4E-13 T 14-10-2018 PhaeoP54_01466 034f410eab95d8c85fd961e14822a897 759 SMART SM00388 511 583 1.1E-10 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PhaeoP54_01466 034f410eab95d8c85fd961e14822a897 759 SUPERFAMILY SSF158472 329 378 1.14E-9 T 14-10-2018 PhaeoP54_01466 034f410eab95d8c85fd961e14822a897 759 SMART SM00387 623 744 7.9E-25 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PhaeoP54_01466 034f410eab95d8c85fd961e14822a897 759 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 628 741 2.1E-14 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PhaeoP54_01466 034f410eab95d8c85fd961e14822a897 759 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 392 508 3.0E-7 T 14-10-2018 IPR000014 PAS domain PhaeoP54_01466 034f410eab95d8c85fd961e14822a897 759 PRINTS PR00344 Bacterial sensor protein C-terminal signature 670 684 3.8E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PhaeoP54_01466 034f410eab95d8c85fd961e14822a897 759 PRINTS PR00344 Bacterial sensor protein C-terminal signature 687 697 3.8E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PhaeoP54_01466 034f410eab95d8c85fd961e14822a897 759 PRINTS PR00344 Bacterial sensor protein C-terminal signature 698 716 3.8E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PhaeoP54_01466 034f410eab95d8c85fd961e14822a897 759 Gene3D G3DSA:3.30.450.20 386 500 5.4E-16 T 14-10-2018 PhaeoP54_01466 034f410eab95d8c85fd961e14822a897 759 SMART SM00304 328 381 7.8E-14 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 PhaeoP54_01466 034f410eab95d8c85fd961e14822a897 759 Gene3D G3DSA:1.10.287.130 501 580 2.2E-14 T 14-10-2018 PhaeoP54_01466 034f410eab95d8c85fd961e14822a897 759 PIRSF PIRSF037532 13 748 9.6E-220 T 14-10-2018 IPR017232 Signal transduction histidine kinase, nitrogen fixation and metabolism regulator PhaeoP54_01885 a0a1c20ec53bbe30881f53c89cda1641 325 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 9 323 1.0E-122 T 14-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 PhaeoP54_01885 a0a1c20ec53bbe30881f53c89cda1641 325 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 54 319 4.1E-100 T 14-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 PhaeoP54_01885 a0a1c20ec53bbe30881f53c89cda1641 325 Gene3D G3DSA:3.40.718.10 6 325 2.7E-117 T 14-10-2018 PhaeoP54_01885 a0a1c20ec53bbe30881f53c89cda1641 325 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 7 325 34.851 T 14-10-2018 IPR037510 4-hydroxythreonine-4-phosphate dehydrogenase GO:0042823|GO:0050570 KEGG: 00750+1.1.1.262 PhaeoP54_01885 a0a1c20ec53bbe30881f53c89cda1641 325 SUPERFAMILY SSF53659 8 323 4.39E-107 T 14-10-2018 PhaeoP54_00970 a27b83a011309182f22d61cec66a9163 317 SUPERFAMILY SSF56281 36 269 7.28E-39 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like PhaeoP54_00970 a27b83a011309182f22d61cec66a9163 317 Gene3D G3DSA:3.60.15.10 38 274 3.1E-33 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like PhaeoP54_00970 a27b83a011309182f22d61cec66a9163 317 SMART SM00849 63 248 2.9E-7 T 14-10-2018 IPR001279 Metallo-beta-lactamase PhaeoP54_03593 4de4733e495bca88a8689791a2d2a517 432 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 286 303 0.13 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_03593 4de4733e495bca88a8689791a2d2a517 432 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 305 321 0.096 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_03593 4de4733e495bca88a8689791a2d2a517 432 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 332 348 0.29 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_03593 4de4733e495bca88a8689791a2d2a517 432 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 268 285 0.0045 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_03593 4de4733e495bca88a8689791a2d2a517 432 Gene3D G3DSA:2.150.10.10 239 306 2.3E-10 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal PhaeoP54_03593 4de4733e495bca88a8689791a2d2a517 432 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 328 346 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site PhaeoP54_03593 4de4733e495bca88a8689791a2d2a517 432 PRINTS PR00313 NodO calcium binding signature 332 340 9.2E-10 T 14-10-2018 PhaeoP54_03593 4de4733e495bca88a8689791a2d2a517 432 PRINTS PR00313 NodO calcium binding signature 341 350 9.2E-10 T 14-10-2018 PhaeoP54_03593 4de4733e495bca88a8689791a2d2a517 432 PRINTS PR00313 NodO calcium binding signature 275 286 9.2E-10 T 14-10-2018 PhaeoP54_03593 4de4733e495bca88a8689791a2d2a517 432 PRINTS PR00313 NodO calcium binding signature 323 331 9.2E-10 T 14-10-2018 PhaeoP54_03593 4de4733e495bca88a8689791a2d2a517 432 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 319 337 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site PhaeoP54_03593 4de4733e495bca88a8689791a2d2a517 432 SUPERFAMILY SSF51120 259 411 4.5E-26 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal PhaeoP54_03593 4de4733e495bca88a8689791a2d2a517 432 Gene3D G3DSA:2.60.120.200 22 238 2.1E-29 T 14-10-2018 PhaeoP54_03593 4de4733e495bca88a8689791a2d2a517 432 Gene3D G3DSA:2.150.10.10 307 428 3.6E-18 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal PhaeoP54_03593 4de4733e495bca88a8689791a2d2a517 432 Pfam PF00722 Glycosyl hydrolases family 16 39 198 4.5E-17 T 14-10-2018 IPR000757 Glycoside hydrolase family 16 GO:0004553|GO:0005975 PhaeoP54_03593 4de4733e495bca88a8689791a2d2a517 432 SUPERFAMILY SSF49899 29 241 2.11E-25 T 14-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily PhaeoP54_03593 4de4733e495bca88a8689791a2d2a517 432 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 310 328 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site PhaeoP54_03028 b44fc9bb5c77498f934d67ef122613e1 137 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 127 7.2E-59 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PhaeoP54_03028 b44fc9bb5c77498f934d67ef122613e1 137 ProSitePatterns PS00701 Ribosomal protein L16 signature 2. 82 93 - T 14-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 PhaeoP54_03028 b44fc9bb5c77498f934d67ef122613e1 137 Pfam PF00252 Ribosomal protein L16p/L10e 4 132 3.6E-50 T 14-10-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 PhaeoP54_03028 b44fc9bb5c77498f934d67ef122613e1 137 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 134 38.681 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PhaeoP54_03028 b44fc9bb5c77498f934d67ef122613e1 137 Gene3D G3DSA:3.90.1170.10 1 137 2.8E-58 T 14-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 PhaeoP54_03028 b44fc9bb5c77498f934d67ef122613e1 137 SUPERFAMILY SSF54686 1 137 8.37E-59 T 14-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 PhaeoP54_03028 b44fc9bb5c77498f934d67ef122613e1 137 PRINTS PR00060 Ribosomal protein L16 signature 42 53 1.6E-38 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PhaeoP54_03028 b44fc9bb5c77498f934d67ef122613e1 137 PRINTS PR00060 Ribosomal protein L16 signature 24 36 1.6E-38 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PhaeoP54_03028 b44fc9bb5c77498f934d67ef122613e1 137 PRINTS PR00060 Ribosomal protein L16 signature 88 117 1.6E-38 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PhaeoP54_03028 b44fc9bb5c77498f934d67ef122613e1 137 PRINTS PR00060 Ribosomal protein L16 signature 58 87 1.6E-38 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PhaeoP54_03028 b44fc9bb5c77498f934d67ef122613e1 137 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 59 70 - T 14-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 PhaeoP54_03718 8a552f7dfd5587be99db3ce51a0bde87 567 SUPERFAMILY SSF161098 300 557 1.59E-46 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_03718 8a552f7dfd5587be99db3ce51a0bde87 567 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 85 268 8.9E-14 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PhaeoP54_03718 8a552f7dfd5587be99db3ce51a0bde87 567 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 378 558 1.6E-18 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PhaeoP54_03718 8a552f7dfd5587be99db3ce51a0bde87 567 Gene3D G3DSA:1.10.3720.10 14 277 1.5E-46 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_03718 8a552f7dfd5587be99db3ce51a0bde87 567 SUPERFAMILY SSF161098 15 267 4.03E-43 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_03718 8a552f7dfd5587be99db3ce51a0bde87 567 Gene3D G3DSA:1.10.3720.10 302 559 1.9E-45 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_02369 512991bd86ba8d2cc87fe4d3bfcb4925 137 SUPERFAMILY SSF49764 31 134 1.92E-19 T 14-10-2018 IPR008978 HSP20-like chaperone PhaeoP54_02369 512991bd86ba8d2cc87fe4d3bfcb4925 137 Gene3D G3DSA:2.60.40.790 32 136 5.4E-21 T 14-10-2018 IPR008978 HSP20-like chaperone PhaeoP54_02369 512991bd86ba8d2cc87fe4d3bfcb4925 137 Pfam PF00011 Hsp20/alpha crystallin family 42 134 5.5E-16 T 14-10-2018 IPR002068 Alpha crystallin/Hsp20 domain PhaeoP54_02598 00e2e738945e80371959f156dc9a71c8 487 Pfam PF04972 BON domain 76 139 6.4E-6 T 14-10-2018 IPR007055 BON domain PhaeoP54_02598 00e2e738945e80371959f156dc9a71c8 487 Pfam PF00924 Mechanosensitive ion channel 208 405 2.5E-35 T 14-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 PhaeoP54_02598 00e2e738945e80371959f156dc9a71c8 487 SUPERFAMILY SSF50182 251 317 1.31E-13 T 14-10-2018 IPR010920 LSM domain superfamily PhaeoP54_02598 00e2e738945e80371959f156dc9a71c8 487 Gene3D G3DSA:2.30.30.60 267 316 9.5E-11 T 14-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily PhaeoP54_02598 00e2e738945e80371959f156dc9a71c8 487 Gene3D G3DSA:3.30.70.100 317 412 6.5E-11 T 14-10-2018 PhaeoP54_02598 00e2e738945e80371959f156dc9a71c8 487 SUPERFAMILY SSF82689 319 417 5.49E-17 T 14-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 PhaeoP54_01615 85b7f582ee2161167a4227bbab8d01a1 251 Gene3D G3DSA:3.40.50.300 2 250 5.3E-78 T 14-10-2018 PhaeoP54_01615 85b7f582ee2161167a4227bbab8d01a1 251 Pfam PF00005 ABC transporter 25 170 1.2E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PhaeoP54_01615 85b7f582ee2161167a4227bbab8d01a1 251 SUPERFAMILY SSF52540 5 232 9.85E-65 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_01615 85b7f582ee2161167a4227bbab8d01a1 251 SMART SM00382 33 219 9.5E-18 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_01615 85b7f582ee2161167a4227bbab8d01a1 251 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PhaeoP54_03254 fe18449c9665ce9dcb5b4ec2424a2a0e 151 SUPERFAMILY SSF55781 6 146 3.64E-32 T 14-10-2018 PhaeoP54_03254 fe18449c9665ce9dcb5b4ec2424a2a0e 151 Gene3D G3DSA:3.30.450.40 2 150 3.7E-47 T 14-10-2018 IPR029016 GAF-like domain superfamily PhaeoP54_03254 fe18449c9665ce9dcb5b4ec2424a2a0e 151 Pfam PF13185 GAF domain 57 146 1.4E-10 T 14-10-2018 IPR003018 GAF domain GO:0005515 PhaeoP54_01191 7d75e8348ac4d02549915446d94dae02 140 SUPERFAMILY SSF54637 3 136 6.5E-34 T 14-10-2018 IPR029069 HotDog domain superfamily PhaeoP54_01191 7d75e8348ac4d02549915446d94dae02 140 Gene3D G3DSA:3.10.129.10 3 139 2.3E-53 T 14-10-2018 PhaeoP54_01191 7d75e8348ac4d02549915446d94dae02 140 Pfam PF03061 Thioesterase superfamily 50 124 4.9E-16 T 14-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 PhaeoP54_01191 7d75e8348ac4d02549915446d94dae02 140 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 18 122 2.8E-19 T 14-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 PhaeoP54_00621 633828a6fa776e30939f1c0d5a9b2240 742 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 1 740 23.595 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 PhaeoP54_00621 633828a6fa776e30939f1c0d5a9b2240 742 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 3 561 6.4E-142 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 PhaeoP54_00621 633828a6fa776e30939f1c0d5a9b2240 742 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 4 597 5.0E-200 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 PhaeoP54_00621 633828a6fa776e30939f1c0d5a9b2240 742 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 5 18 1.5E-29 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 PhaeoP54_00621 633828a6fa776e30939f1c0d5a9b2240 742 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 393 412 1.5E-29 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 PhaeoP54_00621 633828a6fa776e30939f1c0d5a9b2240 742 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 240 255 1.5E-29 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 PhaeoP54_00621 633828a6fa776e30939f1c0d5a9b2240 742 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 48 60 1.5E-29 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 PhaeoP54_00621 633828a6fa776e30939f1c0d5a9b2240 742 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 313 329 1.5E-29 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 PhaeoP54_00621 633828a6fa776e30939f1c0d5a9b2240 742 Pfam PF05746 DALR anticodon binding domain 630 735 7.6E-10 T 14-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 PhaeoP54_00621 633828a6fa776e30939f1c0d5a9b2240 742 SUPERFAMILY SSF109604 348 487 3.87E-18 T 14-10-2018 PhaeoP54_01013 aad5180a53c7b9c3c92f23ad3150ae12 432 SUPERFAMILY SSF142019 3 240 7.72E-86 T 14-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PhaeoP54_01013 aad5180a53c7b9c3c92f23ad3150ae12 432 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 345 356 - T 14-10-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PhaeoP54_01013 aad5180a53c7b9c3c92f23ad3150ae12 432 TIGRFAM TIGR01959 nuoF_fam: NADH oxidoreductase (quinone), F subunit 8 418 4.4E-196 T 14-10-2018 IPR011537 NADH ubiquinone oxidoreductase, F subunit GO:0010181|GO:0016651|GO:0051287|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PhaeoP54_01013 aad5180a53c7b9c3c92f23ad3150ae12 432 ProSitePatterns PS00644 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 1. 167 182 - T 14-10-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PhaeoP54_01013 aad5180a53c7b9c3c92f23ad3150ae12 432 SMART SM00928 332 377 6.9E-26 T 14-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PhaeoP54_01013 aad5180a53c7b9c3c92f23ad3150ae12 432 Gene3D G3DSA:1.20.1440.230 330 430 4.4E-38 T 14-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PhaeoP54_01013 aad5180a53c7b9c3c92f23ad3150ae12 432 SUPERFAMILY SSF140490 329 421 7.45E-37 T 14-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PhaeoP54_01013 aad5180a53c7b9c3c92f23ad3150ae12 432 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 47 219 2.4E-51 T 14-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PhaeoP54_01013 aad5180a53c7b9c3c92f23ad3150ae12 432 SUPERFAMILY SSF142984 241 327 2.48E-20 T 14-10-2018 PhaeoP54_01013 aad5180a53c7b9c3c92f23ad3150ae12 432 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 334 416 3.9E-30 T 14-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PhaeoP54_01013 aad5180a53c7b9c3c92f23ad3150ae12 432 Gene3D G3DSA:3.40.50.11540 52 231 2.7E-83 T 14-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PhaeoP54_01013 aad5180a53c7b9c3c92f23ad3150ae12 432 Pfam PF10531 SLBB domain 243 292 1.1E-7 T 14-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PhaeoP54_01013 aad5180a53c7b9c3c92f23ad3150ae12 432 Gene3D G3DSA:3.10.20.600 232 329 4.9E-37 T 14-10-2018 PhaeoP54_03057 0eac7b7a66bfe3a24263bdb96e79c2df 141 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 141 2.1E-64 T 14-10-2018 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PhaeoP54_03057 0eac7b7a66bfe3a24263bdb96e79c2df 141 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 67 4.3E-28 T 14-10-2018 IPR020784 Ribosomal protein L11, N-terminal PhaeoP54_03057 0eac7b7a66bfe3a24263bdb96e79c2df 141 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 141 29.792 T 14-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 PhaeoP54_03057 0eac7b7a66bfe3a24263bdb96e79c2df 141 Gene3D G3DSA:3.30.1550.10 2 72 8.5E-34 T 14-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily PhaeoP54_03057 0eac7b7a66bfe3a24263bdb96e79c2df 141 Pfam PF00298 Ribosomal protein L11, RNA binding domain 72 140 7.1E-27 T 14-10-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 PhaeoP54_03057 0eac7b7a66bfe3a24263bdb96e79c2df 141 SUPERFAMILY SSF54747 3 73 8.24E-29 T 14-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily PhaeoP54_03057 0eac7b7a66bfe3a24263bdb96e79c2df 141 Gene3D G3DSA:1.10.10.2720 73 141 1.4E-28 T 14-10-2018 PhaeoP54_03057 0eac7b7a66bfe3a24263bdb96e79c2df 141 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 74 2.0E-17 T 14-10-2018 PhaeoP54_03057 0eac7b7a66bfe3a24263bdb96e79c2df 141 SUPERFAMILY SSF46906 69 140 3.66E-26 T 14-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily PhaeoP54_03057 0eac7b7a66bfe3a24263bdb96e79c2df 141 SMART SM00649 9 141 1.8E-77 T 14-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 PhaeoP54_03944 256ea9bd39d44bdddd0eb1f8d8c5eeb4 361 Gene3D G3DSA:2.40.50.100 243 359 3.7E-26 T 14-10-2018 PhaeoP54_03944 256ea9bd39d44bdddd0eb1f8d8c5eeb4 361 SUPERFAMILY SSF52540 8 246 1.31E-82 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_03944 256ea9bd39d44bdddd0eb1f8d8c5eeb4 361 SUPERFAMILY SSF50331 240 361 7.09E-26 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal PhaeoP54_03944 256ea9bd39d44bdddd0eb1f8d8c5eeb4 361 Gene3D G3DSA:2.40.50.140 283 346 3.7E-26 T 14-10-2018 PhaeoP54_03944 256ea9bd39d44bdddd0eb1f8d8c5eeb4 361 Pfam PF00005 ABC transporter 23 165 1.3E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PhaeoP54_03944 256ea9bd39d44bdddd0eb1f8d8c5eeb4 361 Gene3D G3DSA:3.40.50.300 2 242 8.9E-74 T 14-10-2018 PhaeoP54_03944 256ea9bd39d44bdddd0eb1f8d8c5eeb4 361 Pfam PF08402 TOBE domain 280 353 6.3E-7 T 14-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 PhaeoP54_03944 256ea9bd39d44bdddd0eb1f8d8c5eeb4 361 SMART SM00382 32 223 2.6E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_03944 256ea9bd39d44bdddd0eb1f8d8c5eeb4 361 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PhaeoP54_02391 3d4446fb14b4c94e0ca642190f00c4b1 125 SUPERFAMILY SSF51316 1 122 5.44E-38 T 14-10-2018 IPR011057 Mss4-like superfamily PhaeoP54_02391 3d4446fb14b4c94e0ca642190f00c4b1 125 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 26 103 2.2E-18 T 14-10-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 PhaeoP54_02391 3d4446fb14b4c94e0ca642190f00c4b1 125 Gene3D G3DSA:2.170.150.70 4 107 1.5E-11 T 14-10-2018 PhaeoP54_03725 c25ca8c424e5189907104839887dd1a1 282 Pfam PF13737 Transposase DDE domain 22 130 4.6E-47 T 14-10-2018 IPR025668 Transposase DDE domain PhaeoP54_00734 63c55e9158f4148f13318366a8675f77 363 PIRSF PIRSF000138 1 363 5.4E-114 T 14-10-2018 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent GO:0010181|GO:0016491|GO:0055114 Reactome: R-HSA-9033241 PhaeoP54_00734 63c55e9158f4148f13318366a8675f77 363 Pfam PF01070 FMN-dependent dehydrogenase 16 361 1.4E-114 T 14-10-2018 IPR000262 FMN-dependent dehydrogenase GO:0016491 Reactome: R-HSA-9033241 PhaeoP54_00734 63c55e9158f4148f13318366a8675f77 363 SUPERFAMILY SSF51395 6 361 7.33E-90 T 14-10-2018 PhaeoP54_00734 63c55e9158f4148f13318366a8675f77 363 Gene3D G3DSA:3.20.20.70 5 363 8.2E-110 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PhaeoP54_01862 f755c4ddab3d7110747a048d113ce6f6 887 SUPERFAMILY SSF47384 342 420 1.77E-16 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 PhaeoP54_01862 f755c4ddab3d7110747a048d113ce6f6 887 SUPERFAMILY SSF55785 229 343 2.26E-24 T 14-10-2018 IPR035965 PAS domain superfamily PhaeoP54_01862 f755c4ddab3d7110747a048d113ce6f6 887 SMART SM00091 218 285 1.4E-8 T 14-10-2018 IPR000014 PAS domain PhaeoP54_01862 f755c4ddab3d7110747a048d113ce6f6 887 Gene3D G3DSA:3.40.50.2300 610 744 3.8E-36 T 14-10-2018 PhaeoP54_01862 f755c4ddab3d7110747a048d113ce6f6 887 Pfam PF00989 PAS fold 219 333 1.7E-12 T 14-10-2018 IPR013767 PAS fold GO:0006355 PhaeoP54_01862 f755c4ddab3d7110747a048d113ce6f6 887 Gene3D G3DSA:1.10.287.130 335 419 4.3E-22 T 14-10-2018 PhaeoP54_01862 f755c4ddab3d7110747a048d113ce6f6 887 SMART SM00387 469 582 9.1E-32 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PhaeoP54_01862 f755c4ddab3d7110747a048d113ce6f6 887 Gene3D G3DSA:1.20.120.160 783 882 2.1E-7 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 PhaeoP54_01862 f755c4ddab3d7110747a048d113ce6f6 887 Pfam PF01627 Hpt domain 802 854 2.4E-5 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 PhaeoP54_01862 f755c4ddab3d7110747a048d113ce6f6 887 Pfam PF00072 Response regulator receiver domain 621 732 4.0E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PhaeoP54_01862 f755c4ddab3d7110747a048d113ce6f6 887 SMART SM00388 356 421 9.5E-21 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PhaeoP54_01862 f755c4ddab3d7110747a048d113ce6f6 887 SUPERFAMILY SSF52172 619 740 2.56E-34 T 14-10-2018 IPR011006 CheY-like superfamily PhaeoP54_01862 f755c4ddab3d7110747a048d113ce6f6 887 Gene3D G3DSA:3.30.565.10 425 585 1.4E-40 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PhaeoP54_01862 f755c4ddab3d7110747a048d113ce6f6 887 PRINTS PR00344 Bacterial sensor protein C-terminal signature 566 579 1.0E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PhaeoP54_01862 f755c4ddab3d7110747a048d113ce6f6 887 PRINTS PR00344 Bacterial sensor protein C-terminal signature 507 521 1.0E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PhaeoP54_01862 f755c4ddab3d7110747a048d113ce6f6 887 PRINTS PR00344 Bacterial sensor protein C-terminal signature 525 535 1.0E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PhaeoP54_01862 f755c4ddab3d7110747a048d113ce6f6 887 PRINTS PR00344 Bacterial sensor protein C-terminal signature 542 560 1.0E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PhaeoP54_01862 f755c4ddab3d7110747a048d113ce6f6 887 SUPERFAMILY SSF55874 410 580 4.32E-40 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PhaeoP54_01862 f755c4ddab3d7110747a048d113ce6f6 887 Gene3D G3DSA:3.30.450.20 214 334 6.0E-28 T 14-10-2018 PhaeoP54_01862 f755c4ddab3d7110747a048d113ce6f6 887 Pfam PF00512 His Kinase A (phospho-acceptor) domain 357 420 5.4E-17 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PhaeoP54_01862 f755c4ddab3d7110747a048d113ce6f6 887 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 471 581 4.7E-23 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PhaeoP54_01862 f755c4ddab3d7110747a048d113ce6f6 887 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 218 343 2.9E-25 T 14-10-2018 IPR000014 PAS domain PhaeoP54_01862 f755c4ddab3d7110747a048d113ce6f6 887 SUPERFAMILY SSF47226 786 868 3.01E-9 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 PhaeoP54_01862 f755c4ddab3d7110747a048d113ce6f6 887 SMART SM00448 619 732 2.6E-31 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PhaeoP54_00241 747ae9173b3f7c7c9e5d9c616d8d1fb6 337 Gene3D G3DSA:3.40.50.2300 171 297 5.0E-48 T 14-10-2018 PhaeoP54_00241 747ae9173b3f7c7c9e5d9c616d8d1fb6 337 SUPERFAMILY SSF53822 73 334 2.83E-48 T 14-10-2018 IPR028082 Periplasmic binding protein-like I PhaeoP54_00241 747ae9173b3f7c7c9e5d9c616d8d1fb6 337 Gene3D G3DSA:3.40.50.2300 75 313 5.0E-48 T 14-10-2018 PhaeoP54_00241 747ae9173b3f7c7c9e5d9c616d8d1fb6 337 Pfam PF00356 Bacterial regulatory proteins, lacI family 18 61 1.1E-11 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 PhaeoP54_00241 747ae9173b3f7c7c9e5d9c616d8d1fb6 337 Gene3D G3DSA:1.10.260.40 8 71 2.0E-17 T 14-10-2018 PhaeoP54_00241 747ae9173b3f7c7c9e5d9c616d8d1fb6 337 Pfam PF13377 Periplasmic binding protein-like domain 180 336 3.4E-27 T 14-10-2018 PhaeoP54_00241 747ae9173b3f7c7c9e5d9c616d8d1fb6 337 SUPERFAMILY SSF47413 14 72 4.22E-14 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 PhaeoP54_00241 747ae9173b3f7c7c9e5d9c616d8d1fb6 337 SMART SM00354 14 84 6.0E-13 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 PhaeoP54_02767 d557f23346825e4b8237bb2a76d47e89 1071 SUPERFAMILY SSF52343 850 978 5.89E-25 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain PhaeoP54_02767 d557f23346825e4b8237bb2a76d47e89 1071 Gene3D G3DSA:2.40.30.10 751 853 4.3E-21 T 14-10-2018 PhaeoP54_02767 d557f23346825e4b8237bb2a76d47e89 1071 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 993 1060 1.7E-8 T 14-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 PhaeoP54_02767 d557f23346825e4b8237bb2a76d47e89 1071 SUPERFAMILY SSF54292 965 1069 4.46E-20 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 PhaeoP54_02767 d557f23346825e4b8237bb2a76d47e89 1071 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 559 570 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PhaeoP54_02767 d557f23346825e4b8237bb2a76d47e89 1071 SUPERFAMILY SSF54862 547 631 4.71E-13 T 14-10-2018 PhaeoP54_02767 d557f23346825e4b8237bb2a76d47e89 1071 Pfam PF13486 Reductive dehalogenase subunit 441 545 6.0E-8 T 14-10-2018 IPR028894 Reductive dehalogenase domain PhaeoP54_02767 d557f23346825e4b8237bb2a76d47e89 1071 Gene3D G3DSA:3.40.50.80 854 973 1.2E-20 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain PhaeoP54_02767 d557f23346825e4b8237bb2a76d47e89 1071 Gene3D G3DSA:3.30.70.20 555 619 6.8E-7 T 14-10-2018 PhaeoP54_02767 d557f23346825e4b8237bb2a76d47e89 1071 Pfam PF12838 4Fe-4S dicluster domain 559 618 7.7E-7 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PhaeoP54_02767 d557f23346825e4b8237bb2a76d47e89 1071 Gene3D G3DSA:3.10.20.30 977 1069 7.8E-21 T 14-10-2018 IPR012675 Beta-grasp domain superfamily PhaeoP54_02767 d557f23346825e4b8237bb2a76d47e89 1071 PRINTS PR00409 Phthalate dioxygenase reductase family signature 804 818 3.3E-30 T 14-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 PhaeoP54_02767 d557f23346825e4b8237bb2a76d47e89 1071 PRINTS PR00409 Phthalate dioxygenase reductase family signature 889 898 3.3E-30 T 14-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 PhaeoP54_02767 d557f23346825e4b8237bb2a76d47e89 1071 PRINTS PR00409 Phthalate dioxygenase reductase family signature 792 804 3.3E-30 T 14-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 PhaeoP54_02767 d557f23346825e4b8237bb2a76d47e89 1071 PRINTS PR00409 Phthalate dioxygenase reductase family signature 842 856 3.3E-30 T 14-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 PhaeoP54_02767 d557f23346825e4b8237bb2a76d47e89 1071 PRINTS PR00409 Phthalate dioxygenase reductase family signature 782 792 3.3E-30 T 14-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 PhaeoP54_02767 d557f23346825e4b8237bb2a76d47e89 1071 PRINTS PR00409 Phthalate dioxygenase reductase family signature 828 842 3.3E-30 T 14-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 PhaeoP54_02767 d557f23346825e4b8237bb2a76d47e89 1071 PRINTS PR00409 Phthalate dioxygenase reductase family signature 941 949 3.3E-30 T 14-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 PhaeoP54_02767 d557f23346825e4b8237bb2a76d47e89 1071 PRINTS PR00409 Phthalate dioxygenase reductase family signature 864 883 3.3E-30 T 14-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 PhaeoP54_02767 d557f23346825e4b8237bb2a76d47e89 1071 SUPERFAMILY SSF63380 757 852 1.76E-20 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel PhaeoP54_02767 d557f23346825e4b8237bb2a76d47e89 1071 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 1020 1028 - T 14-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 PhaeoP54_03461 187d2b35aaf04991d04ab6539a425df8 436 Gene3D G3DSA:1.10.8.60 328 433 5.2E-36 T 14-10-2018 PhaeoP54_03461 187d2b35aaf04991d04ab6539a425df8 436 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 53 101 2.8E-5 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 PhaeoP54_03461 187d2b35aaf04991d04ab6539a425df8 436 SMART SM00382 49 325 9.1E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_03461 187d2b35aaf04991d04ab6539a425df8 436 SMART SM01086 328 427 5.2E-18 T 14-10-2018 IPR019489 Clp ATPase, C-terminal PhaeoP54_03461 187d2b35aaf04991d04ab6539a425df8 436 Pfam PF07724 AAA domain (Cdc48 subfamily) 204 322 8.9E-38 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 PhaeoP54_03461 187d2b35aaf04991d04ab6539a425df8 436 SUPERFAMILY SSF52540 4 432 1.97E-81 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_03461 187d2b35aaf04991d04ab6539a425df8 436 Hamap MF_00249 ATP-dependent protease ATPase subunit HslU [hslU]. 1 436 40.557 T 14-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 PhaeoP54_03461 187d2b35aaf04991d04ab6539a425df8 436 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 4 436 1.0E-178 T 14-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 PhaeoP54_00855 5f500a681cce0ca1d40469bcbfebcb6f 138 SUPERFAMILY SSF111038 2 137 3.92E-47 T 14-10-2018 IPR035917 YjbQ-like superfamily PhaeoP54_00855 5f500a681cce0ca1d40469bcbfebcb6f 138 Pfam PF01894 Uncharacterised protein family UPF0047 16 136 5.8E-38 T 14-10-2018 IPR001602 Uncharacterised protein family UPF0047 PhaeoP54_00855 5f500a681cce0ca1d40469bcbfebcb6f 138 PIRSF PIRSF004681 1 138 7.0E-47 T 14-10-2018 IPR001602 Uncharacterised protein family UPF0047 PhaeoP54_00855 5f500a681cce0ca1d40469bcbfebcb6f 138 Gene3D G3DSA:2.60.120.460 1 138 3.8E-43 T 14-10-2018 IPR035917 YjbQ-like superfamily PhaeoP54_00855 5f500a681cce0ca1d40469bcbfebcb6f 138 TIGRFAM TIGR00149 TIGR00149_YjbQ: secondary thiamine-phosphate synthase enzyme 6 137 2.2E-39 T 14-10-2018 IPR001602 Uncharacterised protein family UPF0047 PhaeoP54_00855 5f500a681cce0ca1d40469bcbfebcb6f 138 ProSitePatterns PS01314 Uncharacterized protein family UPF0047 signature. 101 119 - T 14-10-2018 IPR001602 Uncharacterised protein family UPF0047 PhaeoP54_03953 91d329dcd82597c978b3eba450dfae2b 396 SUPERFAMILY SSF52343 261 390 3.67E-27 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain PhaeoP54_03953 91d329dcd82597c978b3eba450dfae2b 396 Gene3D G3DSA:1.10.490.10 4 147 1.4E-45 T 14-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 PhaeoP54_03953 91d329dcd82597c978b3eba450dfae2b 396 Gene3D G3DSA:3.40.50.80 258 393 5.5E-24 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain PhaeoP54_03953 91d329dcd82597c978b3eba450dfae2b 396 SUPERFAMILY SSF63380 153 256 1.36E-26 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel PhaeoP54_03953 91d329dcd82597c978b3eba450dfae2b 396 PRINTS PR00410 Phenol hydroxylase reductase family signature 267 286 1.3E-7 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 PhaeoP54_03953 91d329dcd82597c978b3eba450dfae2b 396 PRINTS PR00410 Phenol hydroxylase reductase family signature 355 363 1.3E-7 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 PhaeoP54_03953 91d329dcd82597c978b3eba450dfae2b 396 PRINTS PR00410 Phenol hydroxylase reductase family signature 251 260 1.3E-7 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 PhaeoP54_03953 91d329dcd82597c978b3eba450dfae2b 396 PRINTS PR00410 Phenol hydroxylase reductase family signature 188 200 1.3E-7 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 PhaeoP54_03953 91d329dcd82597c978b3eba450dfae2b 396 Pfam PF00970 Oxidoreductase FAD-binding domain 169 256 7.4E-6 T 14-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 PhaeoP54_03953 91d329dcd82597c978b3eba450dfae2b 396 Pfam PF00042 Globin 10 106 6.3E-6 T 14-10-2018 IPR000971 Globin GO:0020037 PhaeoP54_03953 91d329dcd82597c978b3eba450dfae2b 396 Pfam PF00175 Oxidoreductase NAD-binding domain 268 368 1.4E-6 T 14-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 PhaeoP54_03953 91d329dcd82597c978b3eba450dfae2b 396 SUPERFAMILY SSF46458 4 138 8.07E-31 T 14-10-2018 IPR009050 Globin-like superfamily PhaeoP54_03953 91d329dcd82597c978b3eba450dfae2b 396 Gene3D G3DSA:2.40.30.10 154 257 3.2E-30 T 14-10-2018 PhaeoP54_03690 9f8416c1d3fce3378c30050bb53f10eb 330 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 232 315 8.4E-25 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 PhaeoP54_03690 9f8416c1d3fce3378c30050bb53f10eb 330 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PhaeoP54_03690 9f8416c1d3fce3378c30050bb53f10eb 330 SUPERFAMILY SSF52540 32 311 1.12E-67 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_03690 9f8416c1d3fce3378c30050bb53f10eb 330 Pfam PF00005 ABC transporter 23 181 1.0E-25 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PhaeoP54_03690 9f8416c1d3fce3378c30050bb53f10eb 330 Gene3D G3DSA:3.40.50.300 1 329 5.3E-92 T 14-10-2018 PhaeoP54_03690 9f8416c1d3fce3378c30050bb53f10eb 330 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 233 297 5.2E-19 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 PhaeoP54_03690 9f8416c1d3fce3378c30050bb53f10eb 330 SMART SM00382 32 231 1.2E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_01392 7bb12fecd345f19365fd732b5edc8994 180 Pfam PF00436 Single-strand binding protein family 5 105 1.5E-39 T 14-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 PhaeoP54_01392 7bb12fecd345f19365fd732b5edc8994 180 Gene3D G3DSA:2.40.50.140 2 115 5.6E-47 T 14-10-2018 PhaeoP54_01392 7bb12fecd345f19365fd732b5edc8994 180 SUPERFAMILY SSF50249 4 180 2.09E-53 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold PhaeoP54_01392 7bb12fecd345f19365fd732b5edc8994 180 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 3 180 1.8E-48 T 14-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 PhaeoP54_01392 7bb12fecd345f19365fd732b5edc8994 180 Hamap MF_00984 Single-stranded DNA-binding protein. 5 118 36.518 T 14-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 PhaeoP54_02724 2713839d3f79d68eec5d25227ec4986a 370 Gene3D G3DSA:3.50.50.60 7 348 1.1E-88 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PhaeoP54_02724 2713839d3f79d68eec5d25227ec4986a 370 Gene3D G3DSA:3.30.9.10 79 308 1.1E-88 T 14-10-2018 PhaeoP54_02724 2713839d3f79d68eec5d25227ec4986a 370 Pfam PF01266 FAD dependent oxidoreductase 7 348 5.0E-43 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 PhaeoP54_02724 2713839d3f79d68eec5d25227ec4986a 370 SUPERFAMILY SSF51905 6 366 1.29E-35 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PhaeoP54_01163 21a4cc64ed080064c740312b7b46529f 252 PRINTS PR00111 Alpha/beta hydrolase fold signature 39 54 7.4E-7 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 PhaeoP54_01163 21a4cc64ed080064c740312b7b46529f 252 PRINTS PR00111 Alpha/beta hydrolase fold signature 81 94 7.4E-7 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 PhaeoP54_01163 21a4cc64ed080064c740312b7b46529f 252 PRINTS PR00111 Alpha/beta hydrolase fold signature 95 108 7.4E-7 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 PhaeoP54_01163 21a4cc64ed080064c740312b7b46529f 252 Pfam PF12697 Alpha/beta hydrolase family 18 244 1.5E-20 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 PhaeoP54_01163 21a4cc64ed080064c740312b7b46529f 252 Gene3D G3DSA:3.40.50.1820 3 251 1.1E-55 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold PhaeoP54_01163 21a4cc64ed080064c740312b7b46529f 252 SUPERFAMILY SSF53474 4 250 3.51E-45 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold PhaeoP54_01274 4edca28b701859b476432325fd27e577 653 Gene3D G3DSA:3.40.50.12780 55 519 6.4E-109 T 14-10-2018 PhaeoP54_01274 4edca28b701859b476432325fd27e577 653 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 27 84 2.1E-20 T 14-10-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 PhaeoP54_01274 4edca28b701859b476432325fd27e577 653 SUPERFAMILY SSF56801 19 648 9.16E-181 T 14-10-2018 PhaeoP54_01274 4edca28b701859b476432325fd27e577 653 Gene3D G3DSA:3.30.300.30 522 652 1.5E-28 T 14-10-2018 PhaeoP54_01274 4edca28b701859b476432325fd27e577 653 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 23 647 0.0 T 14-10-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 PhaeoP54_01274 4edca28b701859b476432325fd27e577 653 Pfam PF13193 AMP-binding enzyme C-terminal domain 535 613 8.7E-24 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain PhaeoP54_01274 4edca28b701859b476432325fd27e577 653 Pfam PF00501 AMP-binding enzyme 87 526 9.1E-98 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 PhaeoP54_01274 4edca28b701859b476432325fd27e577 653 Hamap MF_01123 Acetyl-coenzyme A synthetase [acs]. 5 649 51.265 T 14-10-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 PhaeoP54_01274 4edca28b701859b476432325fd27e577 653 ProSitePatterns PS00455 Putative AMP-binding domain signature. 263 274 - T 14-10-2018 IPR020845 AMP-binding, conserved site PhaeoP54_03053 fb9c302e791d6527864b7511bff379ce 1378 Pfam PF04561 RNA polymerase Rpb2, domain 2 370 474 3.5E-18 T 14-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PhaeoP54_03053 fb9c302e791d6527864b7511bff379ce 1378 Pfam PF04561 RNA polymerase Rpb2, domain 2 180 228 2.4E-5 T 14-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PhaeoP54_03053 fb9c302e791d6527864b7511bff379ce 1378 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 13 1374 12.397 T 14-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PhaeoP54_03053 fb9c302e791d6527864b7511bff379ce 1378 Gene3D G3DSA:3.90.1100.10 664 733 8.1E-21 T 14-10-2018 PhaeoP54_03053 fb9c302e791d6527864b7511bff379ce 1378 Gene3D G3DSA:3.90.1100.10 18 177 3.2E-55 T 14-10-2018 PhaeoP54_03053 fb9c302e791d6527864b7511bff379ce 1378 Gene3D G3DSA:2.40.270.10 1038 1274 2.9E-74 T 14-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PhaeoP54_03053 fb9c302e791d6527864b7511bff379ce 1378 Gene3D G3DSA:2.40.50.150 852 973 7.0E-45 T 14-10-2018 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PhaeoP54_03053 fb9c302e791d6527864b7511bff379ce 1378 Gene3D G3DSA:3.90.1100.10 463 651 8.7E-74 T 14-10-2018 PhaeoP54_03053 fb9c302e791d6527864b7511bff379ce 1378 SUPERFAMILY SSF64484 11 1374 0.0 T 14-10-2018 PhaeoP54_03053 fb9c302e791d6527864b7511bff379ce 1378 Gene3D G3DSA:2.40.50.100 734 811 3.8E-31 T 14-10-2018 PhaeoP54_03053 fb9c302e791d6527864b7511bff379ce 1378 Gene3D G3DSA:2.40.270.10 812 851 8.1E-7 T 14-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PhaeoP54_03053 fb9c302e791d6527864b7511bff379ce 1378 ProSitePatterns PS01166 RNA polymerases beta chain signature. 1095 1107 - T 14-10-2018 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PhaeoP54_03053 fb9c302e791d6527864b7511bff379ce 1378 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 9 1371 0.0 T 14-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PhaeoP54_03053 fb9c302e791d6527864b7511bff379ce 1378 Pfam PF10385 RNA polymerase beta subunit external 1 domain 611 676 1.5E-23 T 14-10-2018 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PhaeoP54_03053 fb9c302e791d6527864b7511bff379ce 1378 Pfam PF00562 RNA polymerase Rpb2, domain 6 737 1296 1.1E-164 T 14-10-2018 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PhaeoP54_03053 fb9c302e791d6527864b7511bff379ce 1378 Gene3D G3DSA:3.90.1800.10 1284 1336 9.9E-11 T 14-10-2018 PhaeoP54_03053 fb9c302e791d6527864b7511bff379ce 1378 Pfam PF04560 RNA polymerase Rpb2, domain 7 1298 1372 6.8E-26 T 14-10-2018 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PhaeoP54_03053 fb9c302e791d6527864b7511bff379ce 1378 Pfam PF04563 RNA polymerase beta subunit 27 517 6.3E-33 T 14-10-2018 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PhaeoP54_03053 fb9c302e791d6527864b7511bff379ce 1378 Pfam PF04565 RNA polymerase Rpb2, domain 3 533 601 2.5E-31 T 14-10-2018 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PhaeoP54_03053 fb9c302e791d6527864b7511bff379ce 1378 Gene3D G3DSA:3.90.1110.10 342 462 1.4E-32 T 14-10-2018 IPR037034 RNA polymerase Rpb2, domain 2 superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PhaeoP54_00099 b4245673b19036db46a7b249a9e1d28b 314 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 3 279 2.1E-106 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 PhaeoP54_00099 b4245673b19036db46a7b249a9e1d28b 314 Pfam PF01039 Carboxyl transferase domain 97 240 1.7E-15 T 14-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 PhaeoP54_00099 b4245673b19036db46a7b249a9e1d28b 314 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 1 281 36.023 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 PhaeoP54_00099 b4245673b19036db46a7b249a9e1d28b 314 SUPERFAMILY SSF52096 25 282 3.65E-79 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily PhaeoP54_00099 b4245673b19036db46a7b249a9e1d28b 314 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 129 143 5.2E-37 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 PhaeoP54_00099 b4245673b19036db46a7b249a9e1d28b 314 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 229 240 5.2E-37 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 PhaeoP54_00099 b4245673b19036db46a7b249a9e1d28b 314 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 200 217 5.2E-37 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 PhaeoP54_00099 b4245673b19036db46a7b249a9e1d28b 314 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 251 260 5.2E-37 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 PhaeoP54_00099 b4245673b19036db46a7b249a9e1d28b 314 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 163 181 5.2E-37 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 PhaeoP54_00099 b4245673b19036db46a7b249a9e1d28b 314 Gene3D G3DSA:3.90.226.10 25 283 4.0E-75 T 14-10-2018 PhaeoP54_03083 4997cf83c9ec95bd1abceffc23501d57 299 Pfam PF01545 Cation efflux family 13 205 2.4E-36 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 PhaeoP54_03083 4997cf83c9ec95bd1abceffc23501d57 299 Gene3D G3DSA:3.30.70.1350 205 293 5.6E-31 T 14-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 PhaeoP54_03083 4997cf83c9ec95bd1abceffc23501d57 299 Gene3D G3DSA:1.20.1510.10 7 204 1.3E-52 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily PhaeoP54_03083 4997cf83c9ec95bd1abceffc23501d57 299 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 11 288 4.6E-65 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 PhaeoP54_03083 4997cf83c9ec95bd1abceffc23501d57 299 SUPERFAMILY SSF161111 9 206 1.96E-50 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily PhaeoP54_03083 4997cf83c9ec95bd1abceffc23501d57 299 Pfam PF16916 Dimerisation domain of Zinc Transporter 210 287 1.2E-23 T 14-10-2018 IPR027470 Cation efflux protein, cytoplasmic domain PhaeoP54_03083 4997cf83c9ec95bd1abceffc23501d57 299 SUPERFAMILY SSF160240 208 287 1.96E-21 T 14-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 PhaeoP54_01333 ce8a2122bc91313d2e58f9bea0397a8a 464 Hamap MF_00743 Fumarate hydratase class II [fumC]. 4 462 87.378 T 14-10-2018 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 PhaeoP54_01333 ce8a2122bc91313d2e58f9bea0397a8a 464 SUPERFAMILY SSF48557 4 462 1.73E-153 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 PhaeoP54_01333 ce8a2122bc91313d2e58f9bea0397a8a 464 Pfam PF00206 Lyase 13 342 5.5E-110 T 14-10-2018 IPR022761 Fumarate lyase, N-terminal PhaeoP54_01333 ce8a2122bc91313d2e58f9bea0397a8a 464 PRINTS PR00145 Argininosuccinate lyase family signature 175 195 5.9E-5 T 14-10-2018 PhaeoP54_01333 ce8a2122bc91313d2e58f9bea0397a8a 464 PRINTS PR00145 Argininosuccinate lyase family signature 317 333 5.9E-5 T 14-10-2018 PhaeoP54_01333 ce8a2122bc91313d2e58f9bea0397a8a 464 ProSitePatterns PS00163 Fumarate lyases signature. 317 326 - T 14-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 PhaeoP54_01333 ce8a2122bc91313d2e58f9bea0397a8a 464 Gene3D G3DSA:1.20.200.10 139 407 2.7E-117 T 14-10-2018 PhaeoP54_01333 ce8a2122bc91313d2e58f9bea0397a8a 464 Gene3D G3DSA:1.10.275.10 5 138 1.0E-56 T 14-10-2018 IPR024083 Fumarase/histidase, N-terminal PhaeoP54_01333 ce8a2122bc91313d2e58f9bea0397a8a 464 Gene3D G3DSA:1.10.40.30 408 464 1.7E-25 T 14-10-2018 PhaeoP54_01333 ce8a2122bc91313d2e58f9bea0397a8a 464 PRINTS PR00149 Fumarate lyase superfamily signature 134 152 5.2E-33 T 14-10-2018 IPR000362 Fumarate lyase family PhaeoP54_01333 ce8a2122bc91313d2e58f9bea0397a8a 464 PRINTS PR00149 Fumarate lyase superfamily signature 180 198 5.2E-33 T 14-10-2018 IPR000362 Fumarate lyase family PhaeoP54_01333 ce8a2122bc91313d2e58f9bea0397a8a 464 PRINTS PR00149 Fumarate lyase superfamily signature 317 333 5.2E-33 T 14-10-2018 IPR000362 Fumarate lyase family PhaeoP54_01333 ce8a2122bc91313d2e58f9bea0397a8a 464 PRINTS PR00149 Fumarate lyase superfamily signature 271 298 5.2E-33 T 14-10-2018 IPR000362 Fumarate lyase family PhaeoP54_01333 ce8a2122bc91313d2e58f9bea0397a8a 464 TIGRFAM TIGR00979 fumC_II: fumarate hydratase, class II 5 461 1.7E-219 T 14-10-2018 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 PhaeoP54_01333 ce8a2122bc91313d2e58f9bea0397a8a 464 Pfam PF10415 Fumarase C C-terminus 408 461 1.4E-20 T 14-10-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 PhaeoP54_03691 b5101330b043c5320b98083b89285047 315 SUPERFAMILY SSF161098 94 298 2.62E-25 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_03691 b5101330b043c5320b98083b89285047 315 Gene3D G3DSA:1.10.3720.10 89 309 8.4E-25 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_03691 b5101330b043c5320b98083b89285047 315 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 20 65 1.2E-12 T 14-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain PhaeoP54_03691 b5101330b043c5320b98083b89285047 315 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 119 312 3.3E-29 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PhaeoP54_01584 277d77e1c14b2507eb478718abb99876 357 SUPERFAMILY SSF51161 55 332 8.85E-67 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily PhaeoP54_01584 277d77e1c14b2507eb478718abb99876 357 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 130 158 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 PhaeoP54_01584 277d77e1c14b2507eb478718abb99876 357 Gene3D G3DSA:2.160.10.10 100 327 6.4E-58 T 14-10-2018 PhaeoP54_01584 277d77e1c14b2507eb478718abb99876 357 Gene3D G3DSA:3.40.1390.10 1 95 5.5E-8 T 14-10-2018 PhaeoP54_01584 277d77e1c14b2507eb478718abb99876 357 TIGRFAM TIGR01853 lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD 6 332 7.7E-77 T 14-10-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 PhaeoP54_01584 277d77e1c14b2507eb478718abb99876 357 Pfam PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD 20 87 3.1E-5 T 14-10-2018 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016747 PhaeoP54_01584 277d77e1c14b2507eb478718abb99876 357 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 127 161 3.7E-7 T 14-10-2018 IPR001451 Hexapeptide repeat PhaeoP54_01584 277d77e1c14b2507eb478718abb99876 357 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 241 275 5.2E-6 T 14-10-2018 IPR001451 Hexapeptide repeat PhaeoP54_00311 0559a728a4e9edc1597b990dde98c958 313 Gene3D G3DSA:3.40.190.10 163 263 2.5E-53 T 14-10-2018 PhaeoP54_00311 0559a728a4e9edc1597b990dde98c958 313 SUPERFAMILY SSF46785 4 84 1.53E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_00311 0559a728a4e9edc1597b990dde98c958 313 SUPERFAMILY SSF53850 93 296 1.86E-32 T 14-10-2018 PhaeoP54_00311 0559a728a4e9edc1597b990dde98c958 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 1.9E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PhaeoP54_00311 0559a728a4e9edc1597b990dde98c958 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 1.9E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PhaeoP54_00311 0559a728a4e9edc1597b990dde98c958 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 1.9E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PhaeoP54_00311 0559a728a4e9edc1597b990dde98c958 313 Pfam PF03466 LysR substrate binding domain 92 293 1.8E-29 T 14-10-2018 IPR005119 LysR, substrate-binding PhaeoP54_00311 0559a728a4e9edc1597b990dde98c958 313 Gene3D G3DSA:1.10.10.10 7 93 2.0E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_00311 0559a728a4e9edc1597b990dde98c958 313 Gene3D G3DSA:3.40.190.10 103 290 2.5E-53 T 14-10-2018 PhaeoP54_00311 0559a728a4e9edc1597b990dde98c958 313 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 66 1.4E-18 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PhaeoP54_04082 c29c0a333d9ebee49bd0be2e7135c215 467 Pfam PF13437 HlyD family secretion protein 317 420 3.1E-14 T 14-10-2018 PhaeoP54_04082 c29c0a333d9ebee49bd0be2e7135c215 467 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 329 350 3.7E-40 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 PhaeoP54_04082 c29c0a333d9ebee49bd0be2e7135c215 467 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 362 386 3.7E-40 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 PhaeoP54_04082 c29c0a333d9ebee49bd0be2e7135c215 467 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 429 444 3.7E-40 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 PhaeoP54_04082 c29c0a333d9ebee49bd0be2e7135c215 467 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 53 76 3.7E-40 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 PhaeoP54_04082 c29c0a333d9ebee49bd0be2e7135c215 467 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 95 115 3.7E-40 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 PhaeoP54_04082 c29c0a333d9ebee49bd0be2e7135c215 467 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 444 464 3.7E-40 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 PhaeoP54_04082 c29c0a333d9ebee49bd0be2e7135c215 467 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 386 409 3.7E-40 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 PhaeoP54_04082 c29c0a333d9ebee49bd0be2e7135c215 467 SUPERFAMILY SSF57997 171 322 2.62E-6 T 14-10-2018 PhaeoP54_04082 c29c0a333d9ebee49bd0be2e7135c215 467 Pfam PF13533 Biotin-lipoyl like 92 121 5.5E-6 T 14-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain PhaeoP54_04082 c29c0a333d9ebee49bd0be2e7135c215 467 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 44 464 2.3E-104 T 14-10-2018 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 PhaeoP54_04082 c29c0a333d9ebee49bd0be2e7135c215 467 Gene3D G3DSA:2.40.50.100 90 161 1.2E-7 T 14-10-2018 PhaeoP54_00531 a3d1161bba25ca5c18e35a0d03e2f497 232 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 1 215 45.355 T 14-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 PhaeoP54_00531 a3d1161bba25ca5c18e35a0d03e2f497 232 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 4 202 1.3E-51 T 14-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 PhaeoP54_00531 a3d1161bba25ca5c18e35a0d03e2f497 232 PIRSF PIRSF006293 1 221 4.2E-73 T 14-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 PhaeoP54_00531 a3d1161bba25ca5c18e35a0d03e2f497 232 Pfam PF06508 Queuosine biosynthesis protein QueC 2 208 3.1E-54 T 14-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 PhaeoP54_00531 a3d1161bba25ca5c18e35a0d03e2f497 232 Gene3D G3DSA:3.40.50.620 2 220 3.4E-61 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PhaeoP54_00531 a3d1161bba25ca5c18e35a0d03e2f497 232 SUPERFAMILY SSF52402 2 224 3.31E-60 T 14-10-2018 PhaeoP54_02539 067fc30c1360e17774b2e08e25549cb7 154 Gene3D G3DSA:1.10.10.10 1 139 1.4E-34 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_02539 067fc30c1360e17774b2e08e25549cb7 154 Pfam PF02082 Transcriptional regulator 1 81 6.1E-24 T 14-10-2018 IPR000944 Transcription regulator Rrf2-type PhaeoP54_02539 067fc30c1360e17774b2e08e25549cb7 154 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 131 1.3E-31 T 14-10-2018 IPR000944 Transcription regulator Rrf2-type PhaeoP54_02539 067fc30c1360e17774b2e08e25549cb7 154 SUPERFAMILY SSF46785 2 133 7.59E-37 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_03231 309092cc397672e73c9208492a498c8e 301 SUPERFAMILY SSF55120 10 237 1.06E-75 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 PhaeoP54_03231 309092cc397672e73c9208492a498c8e 301 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 10 299 18.398 T 14-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 PhaeoP54_03231 309092cc397672e73c9208492a498c8e 301 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 32 180 1.4E-49 T 14-10-2018 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 PhaeoP54_03231 309092cc397672e73c9208492a498c8e 301 Gene3D G3DSA:3.30.2350.10 2 237 4.2E-85 T 14-10-2018 PhaeoP54_03231 309092cc397672e73c9208492a498c8e 301 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 181 239 1.4E-14 T 14-10-2018 IPR032819 tRNA pseudouridylate synthase B, C-terminal Reactome: R-HSA-171319|Reactome: R-HSA-6790901 PhaeoP54_03231 309092cc397672e73c9208492a498c8e 301 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 11 219 7.2E-69 T 14-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 PhaeoP54_03547 aaf8068ffcf0779b6361f226db988084 481 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 150 460 8.3E-28 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PhaeoP54_03547 aaf8068ffcf0779b6361f226db988084 481 Gene3D G3DSA:3.50.50.60 149 249 8.8E-10 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PhaeoP54_03547 aaf8068ffcf0779b6361f226db988084 481 SUPERFAMILY SSF51971 149 404 3.35E-67 T 14-10-2018 PhaeoP54_03547 aaf8068ffcf0779b6361f226db988084 481 Gene3D G3DSA:3.50.50.60 250 403 2.5E-44 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PhaeoP54_03547 aaf8068ffcf0779b6361f226db988084 481 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 25 136 2.8E-37 T 14-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 PhaeoP54_03547 aaf8068ffcf0779b6361f226db988084 481 SUPERFAMILY SSF46548 5 158 1.99E-35 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 PhaeoP54_03547 aaf8068ffcf0779b6361f226db988084 481 PRINTS PR00419 Adrenodoxin reductase family signature 328 341 1.3E-33 T 14-10-2018 PhaeoP54_03547 aaf8068ffcf0779b6361f226db988084 481 PRINTS PR00419 Adrenodoxin reductase family signature 215 225 1.3E-33 T 14-10-2018 PhaeoP54_03547 aaf8068ffcf0779b6361f226db988084 481 PRINTS PR00419 Adrenodoxin reductase family signature 294 308 1.3E-33 T 14-10-2018 PhaeoP54_03547 aaf8068ffcf0779b6361f226db988084 481 PRINTS PR00419 Adrenodoxin reductase family signature 173 186 1.3E-33 T 14-10-2018 PhaeoP54_03547 aaf8068ffcf0779b6361f226db988084 481 PRINTS PR00419 Adrenodoxin reductase family signature 150 172 1.3E-33 T 14-10-2018 PhaeoP54_03547 aaf8068ffcf0779b6361f226db988084 481 TIGRFAM TIGR01318 gltD_gamma_fam: glutamate synthase, small subunit 8 472 3.4E-162 T 14-10-2018 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 GO:0006537|GO:0016639 PhaeoP54_03547 aaf8068ffcf0779b6361f226db988084 481 Gene3D G3DSA:1.10.1060.10 8 148 3.2E-34 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 PhaeoP54_01807 71dd2f4fc299d3eeb572663900323c45 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 9.5E-44 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 PhaeoP54_01807 71dd2f4fc299d3eeb572663900323c45 112 SMART SM00938 4 105 2.9E-67 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 PhaeoP54_01807 71dd2f4fc299d3eeb572663900323c45 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 14-10-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 PhaeoP54_01807 71dd2f4fc299d3eeb572663900323c45 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 14-10-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 PhaeoP54_01807 71dd2f4fc299d3eeb572663900323c45 112 Gene3D G3DSA:3.30.70.120 1 112 7.5E-49 T 14-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal PhaeoP54_01807 71dd2f4fc299d3eeb572663900323c45 112 PIRSF PIRSF039144 1 112 2.0E-54 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 PhaeoP54_01807 71dd2f4fc299d3eeb572663900323c45 112 SUPERFAMILY SSF54913 1 112 1.18E-46 T 14-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta PhaeoP54_01807 71dd2f4fc299d3eeb572663900323c45 112 PRINTS PR00340 P-II protein signature 23 41 5.5E-45 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 PhaeoP54_01807 71dd2f4fc299d3eeb572663900323c45 112 PRINTS PR00340 P-II protein signature 83 103 5.5E-45 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 PhaeoP54_01807 71dd2f4fc299d3eeb572663900323c45 112 PRINTS PR00340 P-II protein signature 52 75 5.5E-45 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 PhaeoP54_01807 71dd2f4fc299d3eeb572663900323c45 112 PRINTS PR00340 P-II protein signature 2 17 5.5E-45 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 PhaeoP54_03386 9832632513277d395d72d4ec04b9fc1e 265 TIGRFAM TIGR01331 bisphos_cysQ: 3'(2'),5'-bisphosphate nucleotidase 10 255 2.6E-79 T 14-10-2018 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ GO:0000287|GO:0006790|GO:0008441 KEGG: 00920+3.1.3.7 PhaeoP54_03386 9832632513277d395d72d4ec04b9fc1e 265 PRINTS PR00377 Inositol monophosphatase superfamily signature 82 98 2.5E-11 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 PhaeoP54_03386 9832632513277d395d72d4ec04b9fc1e 265 PRINTS PR00377 Inositol monophosphatase superfamily signature 213 237 2.5E-11 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 PhaeoP54_03386 9832632513277d395d72d4ec04b9fc1e 265 PRINTS PR00377 Inositol monophosphatase superfamily signature 39 59 2.5E-11 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 PhaeoP54_03386 9832632513277d395d72d4ec04b9fc1e 265 PRINTS PR00377 Inositol monophosphatase superfamily signature 61 77 2.5E-11 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 PhaeoP54_03386 9832632513277d395d72d4ec04b9fc1e 265 SUPERFAMILY SSF56655 3 259 9.69E-70 T 14-10-2018 PhaeoP54_03386 9832632513277d395d72d4ec04b9fc1e 265 Gene3D G3DSA:3.40.190.80 155 258 7.6E-34 T 14-10-2018 PhaeoP54_03386 9832632513277d395d72d4ec04b9fc1e 265 Hamap MF_02095 3'(2'),5'-bisphosphate nucleotidase CysQ [cysQ]. 6 258 37.919 T 14-10-2018 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ GO:0000287|GO:0006790|GO:0008441 KEGG: 00920+3.1.3.7 PhaeoP54_03386 9832632513277d395d72d4ec04b9fc1e 265 Gene3D G3DSA:3.30.540.10 2 149 1.0E-38 T 14-10-2018 PhaeoP54_03386 9832632513277d395d72d4ec04b9fc1e 265 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 216 230 - T 14-10-2018 IPR020550 Inositol monophosphatase, conserved site GO:0046854 PhaeoP54_03386 9832632513277d395d72d4ec04b9fc1e 265 Pfam PF00459 Inositol monophosphatase family 7 248 2.4E-48 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 PhaeoP54_01304 7a274ffd44966b0f5c7bf0f706b56046 319 Gene3D G3DSA:1.10.10.10 1 91 9.7E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_01304 7a274ffd44966b0f5c7bf0f706b56046 319 SUPERFAMILY SSF46785 3 111 1.63E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_01304 7a274ffd44966b0f5c7bf0f706b56046 319 Pfam PF03466 LysR substrate binding domain 88 292 2.9E-29 T 14-10-2018 IPR005119 LysR, substrate-binding PhaeoP54_01304 7a274ffd44966b0f5c7bf0f706b56046 319 SUPERFAMILY SSF53850 88 293 3.08E-33 T 14-10-2018 PhaeoP54_01304 7a274ffd44966b0f5c7bf0f706b56046 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 6.3E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PhaeoP54_01304 7a274ffd44966b0f5c7bf0f706b56046 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 6.3E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PhaeoP54_01304 7a274ffd44966b0f5c7bf0f706b56046 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 6.3E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PhaeoP54_01304 7a274ffd44966b0f5c7bf0f706b56046 319 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 8.3E-18 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PhaeoP54_01304 7a274ffd44966b0f5c7bf0f706b56046 319 Gene3D G3DSA:3.40.190.290 92 292 5.5E-45 T 14-10-2018 PhaeoP54_01932 4dcf16dd3960a73a42c0994f93fd306d 583 Gene3D G3DSA:3.40.50.970 1 181 7.4E-71 T 14-10-2018 PhaeoP54_01932 4dcf16dd3960a73a42c0994f93fd306d 583 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 5 169 9.4E-58 T 14-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 PhaeoP54_01932 4dcf16dd3960a73a42c0994f93fd306d 583 Gene3D G3DSA:3.40.50.970 364 576 1.4E-64 T 14-10-2018 PhaeoP54_01932 4dcf16dd3960a73a42c0994f93fd306d 583 SUPERFAMILY SSF52467 187 361 5.39E-62 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily PhaeoP54_01932 4dcf16dd3960a73a42c0994f93fd306d 583 SUPERFAMILY SSF52518 2 180 5.36E-64 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold PhaeoP54_01932 4dcf16dd3960a73a42c0994f93fd306d 583 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 5 565 3.4E-233 T 14-10-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 PhaeoP54_01932 4dcf16dd3960a73a42c0994f93fd306d 583 SUPERFAMILY SSF52518 372 568 6.49E-65 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold PhaeoP54_01932 4dcf16dd3960a73a42c0994f93fd306d 583 Gene3D G3DSA:3.40.50.1220 188 360 2.1E-56 T 14-10-2018 PhaeoP54_01932 4dcf16dd3960a73a42c0994f93fd306d 583 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 194 329 1.6E-41 T 14-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 PhaeoP54_01932 4dcf16dd3960a73a42c0994f93fd306d 583 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 396 543 5.6E-46 T 14-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 PhaeoP54_03135 2753140d98708cee8ef267c8ea344fa7 513 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 270 283 - T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 PhaeoP54_03135 2753140d98708cee8ef267c8ea344fa7 513 SMART SM00382 100 302 1.2E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_03135 2753140d98708cee8ef267c8ea344fa7 513 Gene3D G3DSA:1.20.120.140 4 307 8.5E-116 T 14-10-2018 PhaeoP54_03135 2753140d98708cee8ef267c8ea344fa7 513 Gene3D G3DSA:1.10.260.30 311 447 1.3E-33 T 14-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 PhaeoP54_03135 2753140d98708cee8ef267c8ea344fa7 513 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 458 31.984 T 14-10-2018 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 Reactome: R-HSA-1799339 PhaeoP54_03135 2753140d98708cee8ef267c8ea344fa7 513 Gene3D G3DSA:3.40.50.300 93 286 8.5E-116 T 14-10-2018 PhaeoP54_03135 2753140d98708cee8ef267c8ea344fa7 513 Pfam PF00448 SRP54-type protein, GTPase domain 103 297 3.8E-67 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 PhaeoP54_03135 2753140d98708cee8ef267c8ea344fa7 513 SMART SM00963 1 86 5.7E-33 T 14-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 PhaeoP54_03135 2753140d98708cee8ef267c8ea344fa7 513 SMART SM00962 101 297 1.8E-104 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 PhaeoP54_03135 2753140d98708cee8ef267c8ea344fa7 513 SUPERFAMILY SSF52540 42 355 1.95E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_03135 2753140d98708cee8ef267c8ea344fa7 513 TIGRFAM TIGR00959 ffh: signal recognition particle protein 2 430 1.0E-172 T 14-10-2018 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 PhaeoP54_03135 2753140d98708cee8ef267c8ea344fa7 513 SUPERFAMILY SSF47446 328 432 2.78E-31 T 14-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 PhaeoP54_03135 2753140d98708cee8ef267c8ea344fa7 513 Pfam PF02881 SRP54-type protein, helical bundle domain 5 82 9.8E-20 T 14-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 PhaeoP54_03135 2753140d98708cee8ef267c8ea344fa7 513 Pfam PF02978 Signal peptide binding domain 329 428 9.5E-26 T 14-10-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 PhaeoP54_02798 917c4269579a6903c700736c1b6b0d8e 235 SUPERFAMILY SSF46785 2 62 6.31E-10 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_02798 917c4269579a6903c700736c1b6b0d8e 235 Gene3D G3DSA:1.10.10.10 1 64 3.7E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_02798 917c4269579a6903c700736c1b6b0d8e 235 Pfam PF13280 WYL domain 139 221 6.3E-15 T 14-10-2018 IPR026881 WYL domain PhaeoP54_02798 917c4269579a6903c700736c1b6b0d8e 235 Pfam PF08279 HTH domain 6 59 1.8E-16 T 14-10-2018 IPR013196 Helix-turn-helix, type 11 PhaeoP54_03098 3cb804d60d8f957903072d218e9c81ad 189 Pfam PF01936 NYN domain 7 165 7.6E-39 T 14-10-2018 IPR021139 NYN domain, limkain-b1-type PhaeoP54_03098 3cb804d60d8f957903072d218e9c81ad 189 Gene3D G3DSA:3.40.50.1010 2 168 3.7E-53 T 14-10-2018 PhaeoP54_02717 8a5b223405ea326135b0b8174acd2f6c 505 Gene3D G3DSA:3.40.50.300 2 239 1.4E-59 T 14-10-2018 PhaeoP54_02717 8a5b223405ea326135b0b8174acd2f6c 505 SUPERFAMILY SSF52540 4 223 9.4E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_02717 8a5b223405ea326135b0b8174acd2f6c 505 Pfam PF00005 ABC transporter 270 426 1.0E-10 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PhaeoP54_02717 8a5b223405ea326135b0b8174acd2f6c 505 ProSitePatterns PS00211 ABC transporters family signature. 399 413 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PhaeoP54_02717 8a5b223405ea326135b0b8174acd2f6c 505 Pfam PF00005 ABC transporter 22 166 1.2E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PhaeoP54_02717 8a5b223405ea326135b0b8174acd2f6c 505 SMART SM00382 30 222 4.8E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_02717 8a5b223405ea326135b0b8174acd2f6c 505 Gene3D G3DSA:3.40.50.300 251 489 4.4E-33 T 14-10-2018 PhaeoP54_02717 8a5b223405ea326135b0b8174acd2f6c 505 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PhaeoP54_02717 8a5b223405ea326135b0b8174acd2f6c 505 SUPERFAMILY SSF52540 253 482 5.79E-35 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_01418 9e18b81375fa6776d033e8ad467a3788 696 Pfam PF17191 RecG wedge domain 18 174 4.6E-7 T 14-10-2018 IPR033454 RecG, wedge domain PhaeoP54_01418 9e18b81375fa6776d033e8ad467a3788 696 Pfam PF00270 DEAD/DEAH box helicase 271 426 6.0E-16 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 PhaeoP54_01418 9e18b81375fa6776d033e8ad467a3788 696 Gene3D G3DSA:3.40.50.300 452 624 2.4E-51 T 14-10-2018 PhaeoP54_01418 9e18b81375fa6776d033e8ad467a3788 696 SUPERFAMILY SSF52540 446 648 6.81E-38 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_01418 9e18b81375fa6776d033e8ad467a3788 696 Gene3D G3DSA:3.40.50.300 217 444 8.1E-77 T 14-10-2018 PhaeoP54_01418 9e18b81375fa6776d033e8ad467a3788 696 SMART SM00490 503 583 3.5E-18 T 14-10-2018 IPR001650 Helicase, C-terminal PhaeoP54_01418 9e18b81375fa6776d033e8ad467a3788 696 SUPERFAMILY SSF50249 8 178 1.05E-24 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold PhaeoP54_01418 9e18b81375fa6776d033e8ad467a3788 696 Pfam PF00271 Helicase conserved C-terminal domain 475 582 2.5E-15 T 14-10-2018 IPR001650 Helicase, C-terminal PhaeoP54_01418 9e18b81375fa6776d033e8ad467a3788 696 Gene3D G3DSA:2.40.50.140 51 142 1.6E-7 T 14-10-2018 PhaeoP54_01418 9e18b81375fa6776d033e8ad467a3788 696 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 33 658 2.5E-199 T 14-10-2018 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 PhaeoP54_01418 9e18b81375fa6776d033e8ad467a3788 696 SUPERFAMILY SSF52540 182 448 1.02E-53 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_01418 9e18b81375fa6776d033e8ad467a3788 696 SMART SM00487 264 454 2.5E-27 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain PhaeoP54_00941 555de14d4ae5b3b0a717638d81aad3d9 282 Gene3D G3DSA:1.25.40.10 39 252 9.9E-49 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 PhaeoP54_00941 555de14d4ae5b3b0a717638d81aad3d9 282 Hamap MF_00922 Outer membrane protein assembly factor BamD [bamD]. 6 241 34.068 T 14-10-2018 IPR017689 Outer membrane protein assembly factor BamD PhaeoP54_00941 555de14d4ae5b3b0a717638d81aad3d9 282 SUPERFAMILY SSF48452 41 161 7.09E-9 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 PhaeoP54_00941 555de14d4ae5b3b0a717638d81aad3d9 282 TIGRFAM TIGR03302 OM_YfiO: outer membrane assembly lipoprotein YfiO 9 247 3.9E-82 T 14-10-2018 IPR017689 Outer membrane protein assembly factor BamD PhaeoP54_00941 555de14d4ae5b3b0a717638d81aad3d9 282 Pfam PF13525 Outer membrane lipoprotein 40 233 5.3E-49 T 14-10-2018 IPR039565 Outer membrane lipoprotein BamD-like PhaeoP54_00941 555de14d4ae5b3b0a717638d81aad3d9 282 SUPERFAMILY SSF48452 112 279 1.31E-8 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 PhaeoP54_02173 7a17491d19d83919b123d6a8b19dc7a8 139 SMART SM00530 50 105 1.5E-4 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PhaeoP54_02173 7a17491d19d83919b123d6a8b19dc7a8 139 SUPERFAMILY SSF47413 45 110 1.19E-7 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 PhaeoP54_02173 7a17491d19d83919b123d6a8b19dc7a8 139 Pfam PF01381 Helix-turn-helix 54 104 2.8E-6 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PhaeoP54_02182 ca37dc0412aa318eb1dc6f82358ee573 415 Pfam PF00589 Phage integrase family 260 390 1.0E-5 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 PhaeoP54_02182 ca37dc0412aa318eb1dc6f82358ee573 415 SUPERFAMILY SSF56349 154 391 3.53E-25 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 PhaeoP54_02182 ca37dc0412aa318eb1dc6f82358ee573 415 Gene3D G3DSA:1.10.443.10 242 398 3.6E-13 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 PhaeoP54_00187 22d1316b2f6306837ac7bad8e85fbacb 326 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 26 302 9.0E-41 T 14-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 PhaeoP54_00187 22d1316b2f6306837ac7bad8e85fbacb 326 Gene3D G3DSA:3.40.190.170 24 325 9.3E-71 T 14-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily PhaeoP54_02031 b00c78b7439ae2ebd6a25c4edfccbd33 142 ProSitePatterns PS00934 Glyoxalase I signature 1. 7 27 - T 14-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 PhaeoP54_02031 b00c78b7439ae2ebd6a25c4edfccbd33 142 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 6 120 1.1E-15 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain PhaeoP54_02031 b00c78b7439ae2ebd6a25c4edfccbd33 142 SUPERFAMILY SSF54593 4 126 1.65E-30 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PhaeoP54_02031 b00c78b7439ae2ebd6a25c4edfccbd33 142 Gene3D G3DSA:3.10.180.10 3 131 5.0E-33 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PhaeoP54_02192 c11b97069b4b1f0e5789305f6b610574 315 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 29 303 4.5E-46 T 14-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 PhaeoP54_02192 c11b97069b4b1f0e5789305f6b610574 315 Gene3D G3DSA:3.40.190.10 31 313 1.0E-41 T 14-10-2018 PhaeoP54_02192 c11b97069b4b1f0e5789305f6b610574 315 Gene3D G3DSA:3.40.190.100 112 242 1.0E-41 T 14-10-2018 PhaeoP54_02192 c11b97069b4b1f0e5789305f6b610574 315 SUPERFAMILY SSF53850 25 314 3.26E-54 T 14-10-2018 PhaeoP54_02102 3670917356e89789096f05e40521b18b 298 Gene3D G3DSA:3.40.190.10 163 254 2.3E-33 T 14-10-2018 PhaeoP54_02102 3670917356e89789096f05e40521b18b 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 5.1E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PhaeoP54_02102 3670917356e89789096f05e40521b18b 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 5.1E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PhaeoP54_02102 3670917356e89789096f05e40521b18b 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 5.1E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PhaeoP54_02102 3670917356e89789096f05e40521b18b 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 66 2.0E-20 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PhaeoP54_02102 3670917356e89789096f05e40521b18b 298 SUPERFAMILY SSF53850 91 284 6.92E-20 T 14-10-2018 PhaeoP54_02102 3670917356e89789096f05e40521b18b 298 Pfam PF03466 LysR substrate binding domain 90 229 6.8E-17 T 14-10-2018 IPR005119 LysR, substrate-binding PhaeoP54_02102 3670917356e89789096f05e40521b18b 298 Gene3D G3DSA:3.40.190.10 97 162 2.3E-33 T 14-10-2018 PhaeoP54_02102 3670917356e89789096f05e40521b18b 298 Gene3D G3DSA:1.10.10.10 1 87 4.1E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_02102 3670917356e89789096f05e40521b18b 298 SUPERFAMILY SSF46785 1 85 2.42E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_00633 a86c3f02659297cffed2e746e0745692 398 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 6 395 6.2E-85 T 14-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 PhaeoP54_00633 a86c3f02659297cffed2e746e0745692 398 Pfam PF01494 FAD binding domain 5 346 2.2E-28 T 14-10-2018 IPR002938 FAD-binding domain GO:0071949 PhaeoP54_00633 a86c3f02659297cffed2e746e0745692 398 Gene3D G3DSA:3.50.50.60 6 344 2.1E-76 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PhaeoP54_00633 a86c3f02659297cffed2e746e0745692 398 Gene3D G3DSA:3.30.9.50 80 278 2.1E-76 T 14-10-2018 PhaeoP54_00633 a86c3f02659297cffed2e746e0745692 398 SUPERFAMILY SSF51905 5 391 2.56E-49 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PhaeoP54_00633 a86c3f02659297cffed2e746e0745692 398 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 6 28 3.5E-16 T 14-10-2018 PhaeoP54_00633 a86c3f02659297cffed2e746e0745692 398 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 304 320 3.5E-16 T 14-10-2018 PhaeoP54_00633 a86c3f02659297cffed2e746e0745692 398 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 161 176 3.5E-16 T 14-10-2018 PhaeoP54_00633 a86c3f02659297cffed2e746e0745692 398 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 289 304 3.5E-16 T 14-10-2018 PhaeoP54_00422 9dcb26ae842d270ca188382702566f2e 156 Gene3D G3DSA:3.30.70.920 59 154 7.6E-23 T 14-10-2018 PhaeoP54_00422 9dcb26ae842d270ca188382702566f2e 156 SMART SM00344 7 116 7.8E-43 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 PhaeoP54_00422 9dcb26ae842d270ca188382702566f2e 156 Pfam PF01037 Lrp/AsnC ligand binding domain 73 147 1.6E-20 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain PhaeoP54_00422 9dcb26ae842d270ca188382702566f2e 156 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 34 53 2.2E-15 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 PhaeoP54_00422 9dcb26ae842d270ca188382702566f2e 156 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 7 23 2.2E-15 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 PhaeoP54_00422 9dcb26ae842d270ca188382702566f2e 156 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 23 34 2.2E-15 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 PhaeoP54_00422 9dcb26ae842d270ca188382702566f2e 156 Pfam PF13412 Winged helix-turn-helix DNA-binding 7 54 4.7E-19 T 14-10-2018 PhaeoP54_00422 9dcb26ae842d270ca188382702566f2e 156 SUPERFAMILY SSF54909 67 152 5.5E-19 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel PhaeoP54_00422 9dcb26ae842d270ca188382702566f2e 156 ProSitePatterns PS00519 AsnC-type HTH domain signature. 25 51 - T 14-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site PhaeoP54_00422 9dcb26ae842d270ca188382702566f2e 156 Gene3D G3DSA:1.10.10.10 2 58 7.2E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_00422 9dcb26ae842d270ca188382702566f2e 156 SUPERFAMILY SSF46785 6 66 1.1E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_03891 6255fc25bfeaab412dbad3b9912281fd 156 Pfam PF02742 Iron dependent repressor, metal binding and dimerisation domain 95 149 8.7E-14 T 14-10-2018 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 PhaeoP54_03891 6255fc25bfeaab412dbad3b9912281fd 156 Gene3D G3DSA:1.10.10.10 24 94 4.6E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_03891 6255fc25bfeaab412dbad3b9912281fd 156 Pfam PF01325 Iron dependent repressor, N-terminal DNA binding domain 35 91 3.5E-14 T 14-10-2018 IPR022687 DTXR-type HTH domain GO:0003677 PhaeoP54_03891 6255fc25bfeaab412dbad3b9912281fd 156 SUPERFAMILY SSF46785 48 126 3.63E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_03891 6255fc25bfeaab412dbad3b9912281fd 156 Gene3D G3DSA:1.10.60.10 95 154 3.2E-22 T 14-10-2018 IPR036421 Iron dependent repressor, metal binding and dimerisation domain superfamily GO:0046914|GO:0046983 PhaeoP54_03891 6255fc25bfeaab412dbad3b9912281fd 156 SMART SM00529 56 154 2.3E-33 T 14-10-2018 IPR022689 Iron dependent repressor GO:0003700|GO:0006355|GO:0046914 PhaeoP54_03891 6255fc25bfeaab412dbad3b9912281fd 156 SMART SM00347 30 124 0.0022 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PhaeoP54_02316 404b248182f194f4376514f109f9d559 277 Hamap MF_00056 2-dehydro-3-deoxyphosphooctonate aldolase [kdsA]. 11 273 50.035 T 14-10-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 PhaeoP54_02316 404b248182f194f4376514f109f9d559 277 Gene3D G3DSA:3.20.20.70 2 275 2.1E-97 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PhaeoP54_02316 404b248182f194f4376514f109f9d559 277 Pfam PF00793 DAHP synthetase I family 7 261 7.7E-69 T 14-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 PhaeoP54_02316 404b248182f194f4376514f109f9d559 277 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 16 271 1.6E-118 T 14-10-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 PhaeoP54_02316 404b248182f194f4376514f109f9d559 277 SUPERFAMILY SSF51569 4 271 2.47E-105 T 14-10-2018 PhaeoP54_00357 80f3f3112b87e08243f47e8b84ba06aa 424 Pfam PF01553 Acyltransferase 102 230 3.5E-15 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 PhaeoP54_00357 80f3f3112b87e08243f47e8b84ba06aa 424 SMART SM00563 108 234 1.1E-19 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 PhaeoP54_00357 80f3f3112b87e08243f47e8b84ba06aa 424 SUPERFAMILY SSF69593 59 328 4.97E-21 T 14-10-2018 PhaeoP54_01790 b00b7a9cec4f57bc3c0afb93a2f7d101 431 SUPERFAMILY SSF81342 12 206 3.92E-28 T 14-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 PhaeoP54_01790 b00b7a9cec4f57bc3c0afb93a2f7d101 431 Gene3D G3DSA:2.40.128.110 277 429 2.3E-21 T 14-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily PhaeoP54_01790 b00b7a9cec4f57bc3c0afb93a2f7d101 431 SUPERFAMILY SSF101874 273 430 1.27E-26 T 14-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily PhaeoP54_01790 b00b7a9cec4f57bc3c0afb93a2f7d101 431 Pfam PF01292 Prokaryotic cytochrome b561 17 202 3.3E-26 T 14-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 PhaeoP54_01790 b00b7a9cec4f57bc3c0afb93a2f7d101 431 Pfam PF04264 YceI-like domain 288 425 1.0E-16 T 14-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like PhaeoP54_01790 b00b7a9cec4f57bc3c0afb93a2f7d101 431 SMART SM00867 273 428 1.3E-21 T 14-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like PhaeoP54_00998 63593885786016282bc1e06d22e0790f 386 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 341 360 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 PhaeoP54_00998 63593885786016282bc1e06d22e0790f 386 PIRSF PIRSF016578 9 100 1.6E-6 T 14-10-2018 PhaeoP54_00998 63593885786016282bc1e06d22e0790f 386 PIRSF PIRSF016578 135 386 1.2E-16 T 14-10-2018 PhaeoP54_00998 63593885786016282bc1e06d22e0790f 386 Gene3D G3DSA:1.20.140.10 240 386 1.9E-45 T 14-10-2018 PhaeoP54_00998 63593885786016282bc1e06d22e0790f 386 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 129 141 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 PhaeoP54_00998 63593885786016282bc1e06d22e0790f 386 Gene3D G3DSA:2.40.110.10 126 239 3.9E-44 T 14-10-2018 PhaeoP54_00998 63593885786016282bc1e06d22e0790f 386 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 127 222 6.3E-24 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 PhaeoP54_00998 63593885786016282bc1e06d22e0790f 386 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 12 123 2.0E-38 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 PhaeoP54_00998 63593885786016282bc1e06d22e0790f 386 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 234 382 3.4E-44 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PhaeoP54_00998 63593885786016282bc1e06d22e0790f 386 Gene3D G3DSA:1.10.540.10 2 125 1.0E-49 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 PhaeoP54_00998 63593885786016282bc1e06d22e0790f 386 SUPERFAMILY SSF47203 232 384 9.67E-48 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 PhaeoP54_00998 63593885786016282bc1e06d22e0790f 386 SUPERFAMILY SSF56645 6 247 1.31E-85 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 PhaeoP54_03550 9278ace26383b1f51b52621e8edc6bef 221 Gene3D G3DSA:1.20.1050.10 78 196 2.0E-89 T 14-10-2018 PhaeoP54_03550 9278ace26383b1f51b52621e8edc6bef 221 Pfam PF13417 Glutathione S-transferase, N-terminal domain 4 77 5.7E-23 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 PhaeoP54_03550 9278ace26383b1f51b52621e8edc6bef 221 SUPERFAMILY SSF47616 75 218 7.52E-29 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily PhaeoP54_03550 9278ace26383b1f51b52621e8edc6bef 221 Pfam PF14497 Glutathione S-transferase, C-terminal domain 131 201 1.1E-6 T 14-10-2018 IPR004046 Glutathione S-transferase, C-terminal PhaeoP54_03550 9278ace26383b1f51b52621e8edc6bef 221 SUPERFAMILY SSF52833 2 102 1.01E-27 T 14-10-2018 IPR036249 Thioredoxin-like superfamily PhaeoP54_03550 9278ace26383b1f51b52621e8edc6bef 221 Gene3D G3DSA:3.40.30.10 4 221 2.0E-89 T 14-10-2018 PhaeoP54_02373 e089d4d8664beb9d2c49a1367780855a 382 Gene3D G3DSA:3.20.20.140 318 336 6.7E-9 T 14-10-2018 PhaeoP54_02373 e089d4d8664beb9d2c49a1367780855a 382 Pfam PF07969 Amidohydrolase family 207 358 5.0E-9 T 14-10-2018 IPR013108 Amidohydrolase 3 PhaeoP54_02373 e089d4d8664beb9d2c49a1367780855a 382 SUPERFAMILY SSF51338 6 375 5.99E-11 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 PhaeoP54_02373 e089d4d8664beb9d2c49a1367780855a 382 SUPERFAMILY SSF51556 50 340 1.53E-9 T 14-10-2018 IPR032466 Metal-dependent hydrolase PhaeoP54_02373 e089d4d8664beb9d2c49a1367780855a 382 PIRSF PIRSF038971 4 369 1.2E-84 T 14-10-2018 IPR012696 Phosphonate metabolism PhnM GO:0019700 KEGG: 00440+3.6.1.63|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 PhaeoP54_02373 e089d4d8664beb9d2c49a1367780855a 382 Gene3D G3DSA:2.30.40.10 337 367 6.7E-9 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 PhaeoP54_02448 3a72481f6b95f1d8664d534528a53bca 401 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 92 153 1.7E-13 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 PhaeoP54_02448 3a72481f6b95f1d8664d534528a53bca 401 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 214 396 2.7E-9 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PhaeoP54_02448 3a72481f6b95f1d8664d534528a53bca 401 Gene3D G3DSA:1.10.3720.10 78 182 7.2E-13 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_02448 3a72481f6b95f1d8664d534528a53bca 401 Gene3D G3DSA:1.10.3720.10 189 398 4.0E-29 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_02448 3a72481f6b95f1d8664d534528a53bca 401 SUPERFAMILY SSF161098 192 382 4.58E-25 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_02448 3a72481f6b95f1d8664d534528a53bca 401 SUPERFAMILY SSF161098 90 157 1.07E-10 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_02821 fa31d48467db88e748bfbdecfffcd393 221 SUPERFAMILY SSF56784 8 208 4.96E-45 T 14-10-2018 IPR036412 HAD-like superfamily PhaeoP54_02821 fa31d48467db88e748bfbdecfffcd393 221 Pfam PF13419 Haloacid dehalogenase-like hydrolase 11 190 7.5E-22 T 14-10-2018 PhaeoP54_02821 fa31d48467db88e748bfbdecfffcd393 221 Gene3D G3DSA:3.40.50.1000 11 207 6.3E-52 T 14-10-2018 IPR023214 HAD superfamily PhaeoP54_02821 fa31d48467db88e748bfbdecfffcd393 221 Gene3D G3DSA:1.10.150.240 23 88 6.3E-52 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 PhaeoP54_02821 fa31d48467db88e748bfbdecfffcd393 221 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 49 190 6.8E-13 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 PhaeoP54_02821 fa31d48467db88e748bfbdecfffcd393 221 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 102 115 9.5E-5 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 PhaeoP54_02821 fa31d48467db88e748bfbdecfffcd393 221 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 8 19 9.5E-5 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 PhaeoP54_02821 fa31d48467db88e748bfbdecfffcd393 221 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 135 151 9.5E-5 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 PhaeoP54_03793 b98bfbcd0e33479c52841da296ee1c4e 160 Gene3D G3DSA:1.10.10.10 11 98 2.9E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_03793 b98bfbcd0e33479c52841da296ee1c4e 160 Gene3D G3DSA:3.30.1490.190 100 158 1.1E-13 T 14-10-2018 PhaeoP54_03793 b98bfbcd0e33479c52841da296ee1c4e 160 SUPERFAMILY SSF46785 24 152 2.72E-25 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_02255 fedae9ee1c3045a1db7210de0aaad8c2 270 Gene3D G3DSA:3.40.50.720 1 262 1.9E-69 T 14-10-2018 PhaeoP54_02255 fedae9ee1c3045a1db7210de0aaad8c2 270 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 72 83 7.3E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_02255 fedae9ee1c3045a1db7210de0aaad8c2 270 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 125 133 7.3E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_02255 fedae9ee1c3045a1db7210de0aaad8c2 270 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 145 164 7.3E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_02255 fedae9ee1c3045a1db7210de0aaad8c2 270 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 2 171 0.0065 T 14-10-2018 PhaeoP54_02255 fedae9ee1c3045a1db7210de0aaad8c2 270 SUPERFAMILY SSF51735 1 238 2.38E-64 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PhaeoP54_02255 fedae9ee1c3045a1db7210de0aaad8c2 270 Pfam PF00106 short chain dehydrogenase 2 185 6.5E-49 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_02255 fedae9ee1c3045a1db7210de0aaad8c2 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 1.6E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_02255 fedae9ee1c3045a1db7210de0aaad8c2 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 183 1.6E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_02255 fedae9ee1c3045a1db7210de0aaad8c2 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 145 164 1.6E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_02255 fedae9ee1c3045a1db7210de0aaad8c2 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 119 135 1.6E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_02255 fedae9ee1c3045a1db7210de0aaad8c2 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 72 83 1.6E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_01090 d45012443cc80489a6c1d63afcd35b20 581 SMART SM00836 451 580 4.9E-54 T 14-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 PhaeoP54_01090 d45012443cc80489a6c1d63afcd35b20 581 SUPERFAMILY SSF55190 21 106 3.01E-22 T 14-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 PhaeoP54_01090 d45012443cc80489a6c1d63afcd35b20 581 SMART SM01016 5 94 1.2E-35 T 14-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 PhaeoP54_01090 d45012443cc80489a6c1d63afcd35b20 581 Pfam PF05746 DALR anticodon binding domain 451 580 1.1E-28 T 14-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 PhaeoP54_01090 d45012443cc80489a6c1d63afcd35b20 581 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 13 580 9.1E-106 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 PhaeoP54_01090 d45012443cc80489a6c1d63afcd35b20 581 SUPERFAMILY SSF52374 117 462 3.1E-84 T 14-10-2018 PhaeoP54_01090 d45012443cc80489a6c1d63afcd35b20 581 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 133 142 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 PhaeoP54_01090 d45012443cc80489a6c1d63afcd35b20 581 Gene3D G3DSA:1.10.730.10 446 580 2.2E-144 T 14-10-2018 PhaeoP54_01090 d45012443cc80489a6c1d63afcd35b20 581 Pfam PF00750 tRNA synthetases class I (R) 105 413 6.5E-18 T 14-10-2018 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KEGG: 00970+6.1.1.19 PhaeoP54_01090 d45012443cc80489a6c1d63afcd35b20 581 SUPERFAMILY SSF47323 445 580 6.54E-32 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 PhaeoP54_01090 d45012443cc80489a6c1d63afcd35b20 581 Gene3D G3DSA:3.30.1360.70 4 114 2.8E-22 T 14-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 PhaeoP54_01090 d45012443cc80489a6c1d63afcd35b20 581 Hamap MF_00123 Arginine--tRNA ligase [argS]. 5 580 24.469 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 PhaeoP54_01090 d45012443cc80489a6c1d63afcd35b20 581 PRINTS PR01038 Arginyl-tRNA synthetase signature 320 341 4.5E-23 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 PhaeoP54_01090 d45012443cc80489a6c1d63afcd35b20 581 PRINTS PR01038 Arginyl-tRNA synthetase signature 123 138 4.5E-23 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 PhaeoP54_01090 d45012443cc80489a6c1d63afcd35b20 581 PRINTS PR01038 Arginyl-tRNA synthetase signature 138 154 4.5E-23 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 PhaeoP54_01090 d45012443cc80489a6c1d63afcd35b20 581 PRINTS PR01038 Arginyl-tRNA synthetase signature 162 175 4.5E-23 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 PhaeoP54_01090 d45012443cc80489a6c1d63afcd35b20 581 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 16 94 1.1E-20 T 14-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 PhaeoP54_01090 d45012443cc80489a6c1d63afcd35b20 581 Gene3D G3DSA:3.40.50.620 123 445 2.2E-144 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PhaeoP54_00833 9e9dca92e945d57e5ea56673f6a9c981 327 PIRSF PIRSF004532 11 327 2.1E-130 T 14-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 PhaeoP54_00833 9e9dca92e945d57e5ea56673f6a9c981 327 SUPERFAMILY SSF56655 12 319 3.42E-100 T 14-10-2018 PhaeoP54_00833 9e9dca92e945d57e5ea56673f6a9c981 327 TIGRFAM TIGR00330 glpX: fructose-1,6-bisphosphatase, class II 13 318 6.6E-96 T 14-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 PhaeoP54_00833 9e9dca92e945d57e5ea56673f6a9c981 327 Pfam PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded 15 318 3.4E-129 T 14-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 PhaeoP54_00833 9e9dca92e945d57e5ea56673f6a9c981 327 Gene3D G3DSA:3.40.190.90 131 296 2.6E-123 T 14-10-2018 PhaeoP54_00833 9e9dca92e945d57e5ea56673f6a9c981 327 Gene3D G3DSA:3.30.540.10 15 318 2.6E-123 T 14-10-2018 PhaeoP54_00326 b481f7f810a69dd9115c19fb0b4e12c0 201 TIGRFAM TIGR04025 PPOX_FMN_DR2398: pyridoxamine 5'-phosphate oxidase, FMN-binding family 8 201 4.8E-74 T 14-10-2018 IPR024029 Pyridoxamine 5-phosphate oxidase, FMN-dependent PhaeoP54_00326 b481f7f810a69dd9115c19fb0b4e12c0 201 Gene3D G3DSA:2.30.110.10 22 147 4.6E-21 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 PhaeoP54_00326 b481f7f810a69dd9115c19fb0b4e12c0 201 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 29 121 7.4E-15 T 14-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 PhaeoP54_00326 b481f7f810a69dd9115c19fb0b4e12c0 201 SUPERFAMILY SSF50475 22 169 1.1E-20 T 14-10-2018 PhaeoP54_01240 bcbb5556f055bde352771759279b2fb6 450 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 320 1.0E-76 T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 PhaeoP54_01240 bcbb5556f055bde352771759279b2fb6 450 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 153 167 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 PhaeoP54_01240 bcbb5556f055bde352771759279b2fb6 450 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 285 292 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 PhaeoP54_01240 bcbb5556f055bde352771759279b2fb6 450 SUPERFAMILY SSF52440 1 113 2.59E-49 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily PhaeoP54_01240 bcbb5556f055bde352771759279b2fb6 450 SMART SM00878 335 440 1.4E-55 T 14-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 PhaeoP54_01240 bcbb5556f055bde352771759279b2fb6 450 Gene3D G3DSA:3.30.470.20 86 431 2.7E-144 T 14-10-2018 PhaeoP54_01240 bcbb5556f055bde352771759279b2fb6 450 Pfam PF02785 Biotin carboxylase C-terminal domain 335 440 1.1E-34 T 14-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 PhaeoP54_01240 bcbb5556f055bde352771759279b2fb6 450 Gene3D G3DSA:3.40.50.20 1 85 1.4E-36 T 14-10-2018 PhaeoP54_01240 bcbb5556f055bde352771759279b2fb6 450 SUPERFAMILY SSF56059 83 341 1.6E-66 T 14-10-2018 PhaeoP54_01240 bcbb5556f055bde352771759279b2fb6 450 Gene3D G3DSA:3.30.1490.20 131 202 2.7E-144 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 PhaeoP54_01240 bcbb5556f055bde352771759279b2fb6 450 SUPERFAMILY SSF51246 330 444 8.37E-39 T 14-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 PhaeoP54_01240 bcbb5556f055bde352771759279b2fb6 450 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 6.8E-45 T 14-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 PhaeoP54_01240 bcbb5556f055bde352771759279b2fb6 450 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 444 2.5E-214 T 14-10-2018 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 PhaeoP54_03964 0be3e6df499b70fc8e87c6aa70a0dadb 339 SUPERFAMILY SSF53474 109 315 8.4E-20 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold PhaeoP54_03964 0be3e6df499b70fc8e87c6aa70a0dadb 339 Pfam PF09752 Abhydrolase domain containing 18 120 213 3.6E-5 T 14-10-2018 IPR019149 Abhydrolase domain containing 18 PhaeoP54_03897 6cf7c823545282d1430556cd400286a1 798 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 238 745 1.1E-75 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 PhaeoP54_03897 6cf7c823545282d1430556cd400286a1 798 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 466 480 2.8E-20 T 14-10-2018 PhaeoP54_03897 6cf7c823545282d1430556cd400286a1 798 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 666 685 2.8E-20 T 14-10-2018 PhaeoP54_03897 6cf7c823545282d1430556cd400286a1 798 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 315 329 2.8E-20 T 14-10-2018 PhaeoP54_03897 6cf7c823545282d1430556cd400286a1 798 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 613 623 2.8E-20 T 14-10-2018 PhaeoP54_03897 6cf7c823545282d1430556cd400286a1 798 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 690 702 2.8E-20 T 14-10-2018 PhaeoP54_03897 6cf7c823545282d1430556cd400286a1 798 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 590 601 2.8E-20 T 14-10-2018 PhaeoP54_03897 6cf7c823545282d1430556cd400286a1 798 SUPERFAMILY SSF81653 267 365 9.68E-25 T 14-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 PhaeoP54_03897 6cf7c823545282d1430556cd400286a1 798 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 468 474 - T 14-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 PhaeoP54_03897 6cf7c823545282d1430556cd400286a1 798 SUPERFAMILY SSF56784 465 767 2.8E-52 T 14-10-2018 IPR036412 HAD-like superfamily PhaeoP54_03897 6cf7c823545282d1430556cd400286a1 798 Gene3D G3DSA:3.40.50.1000 447 719 5.2E-83 T 14-10-2018 IPR023214 HAD superfamily PhaeoP54_03897 6cf7c823545282d1430556cd400286a1 798 Gene3D G3DSA:3.40.1110.10 477 597 5.2E-83 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 PhaeoP54_03897 6cf7c823545282d1430556cd400286a1 798 SUPERFAMILY SSF81665 211 733 1.7E-15 T 14-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 PhaeoP54_03897 6cf7c823545282d1430556cd400286a1 798 Pfam PF00122 E1-E2 ATPase 265 445 3.0E-52 T 14-10-2018 PhaeoP54_03897 6cf7c823545282d1430556cd400286a1 798 Pfam PF00702 haloacid dehalogenase-like hydrolase 463 679 1.4E-38 T 14-10-2018 PhaeoP54_03897 6cf7c823545282d1430556cd400286a1 798 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 214 769 1.3E-179 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 PhaeoP54_03897 6cf7c823545282d1430556cd400286a1 798 PRINTS PR00941 Cadmium-transporting ATPase signature 350 364 3.6E-12 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 PhaeoP54_03897 6cf7c823545282d1430556cd400286a1 798 PRINTS PR00941 Cadmium-transporting ATPase signature 249 269 3.6E-12 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 PhaeoP54_03897 6cf7c823545282d1430556cd400286a1 798 PRINTS PR00941 Cadmium-transporting ATPase signature 331 347 3.6E-12 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 PhaeoP54_03897 6cf7c823545282d1430556cd400286a1 798 PRINTS PR00941 Cadmium-transporting ATPase signature 60 69 3.6E-12 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 PhaeoP54_03897 6cf7c823545282d1430556cd400286a1 798 Gene3D G3DSA:2.70.150.20 258 369 5.9E-37 T 14-10-2018 PhaeoP54_01426 2c46b271f49e068ee48456519cbc0759 140 SUPERFAMILY SSF54637 24 136 6.74E-25 T 14-10-2018 IPR029069 HotDog domain superfamily PhaeoP54_01426 2c46b271f49e068ee48456519cbc0759 140 Gene3D G3DSA:3.10.129.10 6 140 5.3E-48 T 14-10-2018 PhaeoP54_01426 2c46b271f49e068ee48456519cbc0759 140 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 25 135 1.8E-11 T 14-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 PhaeoP54_01426 2c46b271f49e068ee48456519cbc0759 140 Pfam PF03061 Thioesterase superfamily 49 123 1.2E-9 T 14-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 PhaeoP54_03233 a17ab738f4b6602b7eadc32cf1004a0c 348 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 138 153 0.27 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_03233 a17ab738f4b6602b7eadc32cf1004a0c 348 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 212 226 0.086 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_03233 a17ab738f4b6602b7eadc32cf1004a0c 348 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 230 243 8.3 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_03233 a17ab738f4b6602b7eadc32cf1004a0c 348 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 155 172 0.027 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_03233 a17ab738f4b6602b7eadc32cf1004a0c 348 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 75 90 0.081 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_03233 a17ab738f4b6602b7eadc32cf1004a0c 348 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 111 127 0.2 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_03233 a17ab738f4b6602b7eadc32cf1004a0c 348 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 93 109 7.2E-4 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_03233 a17ab738f4b6602b7eadc32cf1004a0c 348 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 182 199 0.001 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_03233 a17ab738f4b6602b7eadc32cf1004a0c 348 SUPERFAMILY SSF51120 105 257 3.73E-22 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal PhaeoP54_03233 a17ab738f4b6602b7eadc32cf1004a0c 348 Gene3D G3DSA:2.150.10.10 160 206 3.4E-9 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal PhaeoP54_03233 a17ab738f4b6602b7eadc32cf1004a0c 348 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 179 197 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site PhaeoP54_03233 a17ab738f4b6602b7eadc32cf1004a0c 348 SUPERFAMILY SSF51120 22 133 4.71E-12 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal PhaeoP54_03233 a17ab738f4b6602b7eadc32cf1004a0c 348 Gene3D G3DSA:2.150.10.10 23 112 3.0E-11 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal PhaeoP54_03233 a17ab738f4b6602b7eadc32cf1004a0c 348 PRINTS PR00313 NodO calcium binding signature 192 200 4.9E-11 T 14-10-2018 PhaeoP54_03233 a17ab738f4b6602b7eadc32cf1004a0c 348 PRINTS PR00313 NodO calcium binding signature 213 222 4.9E-11 T 14-10-2018 PhaeoP54_03233 a17ab738f4b6602b7eadc32cf1004a0c 348 PRINTS PR00313 NodO calcium binding signature 156 164 4.9E-11 T 14-10-2018 PhaeoP54_03233 a17ab738f4b6602b7eadc32cf1004a0c 348 PRINTS PR00313 NodO calcium binding signature 90 101 4.9E-11 T 14-10-2018 PhaeoP54_03233 a17ab738f4b6602b7eadc32cf1004a0c 348 Gene3D G3DSA:2.150.10.10 207 309 4.1E-7 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal PhaeoP54_03233 a17ab738f4b6602b7eadc32cf1004a0c 348 Gene3D G3DSA:2.150.10.10 113 159 1.4E-10 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal PhaeoP54_03121 fdd2858cd59928f37ad4a6f4e53e7baa 249 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 165 193 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 PhaeoP54_03121 fdd2858cd59928f37ad4a6f4e53e7baa 249 SUPERFAMILY SSF51161 3 210 1.38E-40 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily PhaeoP54_03121 fdd2858cd59928f37ad4a6f4e53e7baa 249 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 13 46 5.4E-8 T 14-10-2018 IPR001451 Hexapeptide repeat PhaeoP54_03121 fdd2858cd59928f37ad4a6f4e53e7baa 249 Gene3D G3DSA:2.160.10.10 2 205 5.9E-53 T 14-10-2018 PhaeoP54_00995 4786ce87006aeddd5d8a290f0ad91c43 221 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 91 181 5.8E-8 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 PhaeoP54_00995 4786ce87006aeddd5d8a290f0ad91c43 221 Gene3D G3DSA:3.40.50.1000 4 207 2.1E-45 T 14-10-2018 IPR023214 HAD superfamily PhaeoP54_00995 4786ce87006aeddd5d8a290f0ad91c43 221 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 131 147 3.4E-9 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 PhaeoP54_00995 4786ce87006aeddd5d8a290f0ad91c43 221 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 100 113 3.4E-9 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 PhaeoP54_00995 4786ce87006aeddd5d8a290f0ad91c43 221 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 1 12 3.4E-9 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 PhaeoP54_00995 4786ce87006aeddd5d8a290f0ad91c43 221 Pfam PF13419 Haloacid dehalogenase-like hydrolase 4 187 1.3E-28 T 14-10-2018 PhaeoP54_00995 4786ce87006aeddd5d8a290f0ad91c43 221 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 59 187 6.5E-9 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 PhaeoP54_00995 4786ce87006aeddd5d8a290f0ad91c43 221 SUPERFAMILY SSF56784 2 214 2.23E-46 T 14-10-2018 IPR036412 HAD-like superfamily PhaeoP54_00995 4786ce87006aeddd5d8a290f0ad91c43 221 Gene3D G3DSA:1.10.150.240 16 86 2.1E-45 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 PhaeoP54_00073 e328c4418b8287880957f45dd6c1f20b 309 PIRSF PIRSF031900 12 309 1.5E-34 T 14-10-2018 IPR014567 Uncharacterised conserved protein UCP031900 PhaeoP54_00073 e328c4418b8287880957f45dd6c1f20b 309 Pfam PF13449 Esterase-like activity of phytase 53 294 1.3E-36 T 14-10-2018 IPR027372 Phytase-like domain PhaeoP54_00073 e328c4418b8287880957f45dd6c1f20b 309 SUPERFAMILY SSF101898 47 277 1.23E-10 T 14-10-2018 PhaeoP54_02241 a43ae22ba994f70a885a067d02d6e81b 385 SMART SM00244 103 272 5.4E-23 T 14-10-2018 IPR001107 Band 7 domain PhaeoP54_02241 a43ae22ba994f70a885a067d02d6e81b 385 TIGRFAM TIGR01933 hflK: HflK protein 105 365 3.0E-78 T 14-10-2018 IPR010201 HflK GO:0016021 PhaeoP54_02241 a43ae22ba994f70a885a067d02d6e81b 385 Pfam PF01145 SPFH domain / Band 7 family 115 287 1.0E-23 T 14-10-2018 IPR001107 Band 7 domain PhaeoP54_02241 a43ae22ba994f70a885a067d02d6e81b 385 Gene3D G3DSA:3.30.479.30 159 263 2.7E-17 T 14-10-2018 PhaeoP54_02241 a43ae22ba994f70a885a067d02d6e81b 385 SUPERFAMILY SSF117892 136 279 3.66E-21 T 14-10-2018 IPR036013 Band 7/SPFH domain superfamily PhaeoP54_03107 3a737d5b946262c4c581278910df86b5 165 Gene3D G3DSA:3.90.45.10 1 164 1.5E-44 T 14-10-2018 IPR036821 Peptide deformylase superfamily PhaeoP54_03107 3a737d5b946262c4c581278910df86b5 165 PIRSF PIRSF004749 1 165 3.5E-46 T 14-10-2018 IPR023635 Peptide deformylase PhaeoP54_03107 3a737d5b946262c4c581278910df86b5 165 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 7 159 4.2E-36 T 14-10-2018 IPR023635 Peptide deformylase PhaeoP54_03107 3a737d5b946262c4c581278910df86b5 165 PRINTS PR01576 Peptide deformylase signature 121 150 1.1E-26 T 14-10-2018 IPR023635 Peptide deformylase PhaeoP54_03107 3a737d5b946262c4c581278910df86b5 165 PRINTS PR01576 Peptide deformylase signature 33 62 1.1E-26 T 14-10-2018 IPR023635 Peptide deformylase PhaeoP54_03107 3a737d5b946262c4c581278910df86b5 165 PRINTS PR01576 Peptide deformylase signature 102 120 1.1E-26 T 14-10-2018 IPR023635 Peptide deformylase PhaeoP54_03107 3a737d5b946262c4c581278910df86b5 165 SUPERFAMILY SSF56420 3 163 1.3E-49 T 14-10-2018 IPR036821 Peptide deformylase superfamily PhaeoP54_03107 3a737d5b946262c4c581278910df86b5 165 Pfam PF01327 Polypeptide deformylase 7 153 5.4E-38 T 14-10-2018 IPR023635 Peptide deformylase PhaeoP54_03107 3a737d5b946262c4c581278910df86b5 165 Hamap MF_00163 Peptide deformylase [def]. 2 163 23.606 T 14-10-2018 IPR023635 Peptide deformylase PhaeoP54_00816 310a0427e317490736150d4a4c109450 300 SUPERFAMILY SSF103481 202 298 1.31E-10 T 14-10-2018 PhaeoP54_00816 310a0427e317490736150d4a4c109450 300 SUPERFAMILY SSF103481 46 144 3.66E-8 T 14-10-2018 PhaeoP54_00816 310a0427e317490736150d4a4c109450 300 Pfam PF00892 EamA-like transporter family 159 297 3.7E-9 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 PhaeoP54_00702 af63eb9a2cc178ce828c63ec0ddb4202 571 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 121 131 - T 14-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 PhaeoP54_00702 af63eb9a2cc178ce828c63ec0ddb4202 571 SUPERFAMILY SSF52016 373 558 2.51E-56 T 14-10-2018 PhaeoP54_00702 af63eb9a2cc178ce828c63ec0ddb4202 571 Gene3D G3DSA:3.50.30.80 373 527 1.4E-46 T 14-10-2018 PhaeoP54_00702 af63eb9a2cc178ce828c63ec0ddb4202 571 Pfam PF00920 Dehydratase family 38 553 4.2E-175 T 14-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 PhaeoP54_00702 af63eb9a2cc178ce828c63ec0ddb4202 571 SUPERFAMILY SSF143975 4 370 8.89E-119 T 14-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 PhaeoP54_02611 db04c5a3a05b1240d1b168eda1ade470 271 SUPERFAMILY SSF52172 146 261 2.56E-22 T 14-10-2018 IPR011006 CheY-like superfamily PhaeoP54_02611 db04c5a3a05b1240d1b168eda1ade470 271 PIRSF PIRSF036400 8 271 3.0E-96 T 14-10-2018 IPR014605 Signal transduction response regulator PhyR-like, alphaproteobacteria PhaeoP54_02611 db04c5a3a05b1240d1b168eda1ade470 271 SUPERFAMILY SSF88659 89 140 1.03E-6 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like PhaeoP54_02611 db04c5a3a05b1240d1b168eda1ade470 271 SMART SM00448 146 257 2.5E-13 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PhaeoP54_02611 db04c5a3a05b1240d1b168eda1ade470 271 Pfam PF00072 Response regulator receiver domain 148 256 1.3E-12 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PhaeoP54_02611 db04c5a3a05b1240d1b168eda1ade470 271 Gene3D G3DSA:3.40.50.2300 145 269 5.3E-29 T 14-10-2018 PhaeoP54_02611 db04c5a3a05b1240d1b168eda1ade470 271 Gene3D G3DSA:1.20.140.160 8 144 8.5E-42 T 14-10-2018 PhaeoP54_01306 75125c31b6616de6ae8cd4c5d0ac2392 348 SUPERFAMILY SSF55326 8 170 3.29E-48 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily PhaeoP54_01306 75125c31b6616de6ae8cd4c5d0ac2392 348 Pfam PF02769 AIR synthase related protein, C-terminal domain 177 340 7.6E-40 T 14-10-2018 IPR010918 PurM-like, C-terminal domain PhaeoP54_01306 75125c31b6616de6ae8cd4c5d0ac2392 348 Pfam PF00586 AIR synthase related protein, N-terminal domain 63 165 2.8E-15 T 14-10-2018 IPR016188 PurM-like, N-terminal domain PhaeoP54_01306 75125c31b6616de6ae8cd4c5d0ac2392 348 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 8 346 44.821 T 14-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 PhaeoP54_01306 75125c31b6616de6ae8cd4c5d0ac2392 348 Gene3D G3DSA:3.90.650.10 173 345 9.4E-70 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily PhaeoP54_01306 75125c31b6616de6ae8cd4c5d0ac2392 348 SUPERFAMILY SSF56042 174 342 2.69E-61 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily PhaeoP54_01306 75125c31b6616de6ae8cd4c5d0ac2392 348 Gene3D G3DSA:3.30.1330.10 7 171 2.8E-68 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily PhaeoP54_01306 75125c31b6616de6ae8cd4c5d0ac2392 348 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 8 337 2.5E-130 T 14-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 PhaeoP54_00923 7b015b52962e5b375a5c9e647463f9b6 470 Gene3D G3DSA:3.40.1390.10 2 81 6.2E-20 T 14-10-2018 PhaeoP54_00923 7b015b52962e5b375a5c9e647463f9b6 470 Pfam PF01225 Mur ligase family, catalytic domain 23 92 1.3E-7 T 14-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 PhaeoP54_00923 7b015b52962e5b375a5c9e647463f9b6 470 SUPERFAMILY SSF53623 101 314 1.96E-47 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 PhaeoP54_00923 7b015b52962e5b375a5c9e647463f9b6 470 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 28 458 1.4E-105 T 14-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 PhaeoP54_00923 7b015b52962e5b375a5c9e647463f9b6 470 Gene3D G3DSA:3.40.1190.10 82 315 1.4E-57 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 PhaeoP54_00923 7b015b52962e5b375a5c9e647463f9b6 470 SUPERFAMILY SSF53244 334 458 3.2E-28 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 PhaeoP54_00923 7b015b52962e5b375a5c9e647463f9b6 470 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 1 461 31.017 T 14-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 PhaeoP54_00923 7b015b52962e5b375a5c9e647463f9b6 470 Pfam PF02875 Mur ligase family, glutamate ligase domain 335 392 5.8E-9 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 PhaeoP54_00923 7b015b52962e5b375a5c9e647463f9b6 470 Pfam PF08245 Mur ligase middle domain 106 298 6.4E-40 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 PhaeoP54_00923 7b015b52962e5b375a5c9e647463f9b6 470 SUPERFAMILY SSF63418 3 94 1.24E-19 T 14-10-2018 IPR035911 MurE/MurF, N-terminal PhaeoP54_00923 7b015b52962e5b375a5c9e647463f9b6 470 Gene3D G3DSA:3.90.190.20 319 460 3.9E-30 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 PhaeoP54_03286 f74f8fab99b65533975dc55df87b7b93 267 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 206 220 - T 14-10-2018 IPR020550 Inositol monophosphatase, conserved site GO:0046854 PhaeoP54_03286 f74f8fab99b65533975dc55df87b7b93 267 SUPERFAMILY SSF56655 4 255 8.25E-69 T 14-10-2018 PhaeoP54_03286 f74f8fab99b65533975dc55df87b7b93 267 Gene3D G3DSA:3.30.540.10 3 141 1.9E-37 T 14-10-2018 PhaeoP54_03286 f74f8fab99b65533975dc55df87b7b93 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 38 58 9.3E-24 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 PhaeoP54_03286 f74f8fab99b65533975dc55df87b7b93 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 60 76 9.3E-24 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 PhaeoP54_03286 f74f8fab99b65533975dc55df87b7b93 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 203 227 9.3E-24 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 PhaeoP54_03286 f74f8fab99b65533975dc55df87b7b93 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 131 154 9.3E-24 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 PhaeoP54_03286 f74f8fab99b65533975dc55df87b7b93 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 82 98 9.3E-24 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 PhaeoP54_03286 f74f8fab99b65533975dc55df87b7b93 267 Pfam PF00459 Inositol monophosphatase family 6 255 1.4E-45 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 PhaeoP54_03286 f74f8fab99b65533975dc55df87b7b93 267 Gene3D G3DSA:3.40.190.80 165 260 1.2E-17 T 14-10-2018 PhaeoP54_03590 9ccdcd609865cc903ffd5d0b15fcd45d 227 Pfam PF11638 DnaA N-terminal domain 159 213 3.0E-6 T 14-10-2018 IPR024633 DnaA N-terminal domain PhaeoP54_03590 9ccdcd609865cc903ffd5d0b15fcd45d 227 SUPERFAMILY SSF46785 37 92 8.62E-6 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_00536 f08df85dcde7407f02caef5ba5ba5fbf 257 SUPERFAMILY SSF55120 1 254 2.3E-78 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 PhaeoP54_00536 f08df85dcde7407f02caef5ba5ba5fbf 257 PIRSF PIRSF001430 1 256 1.2E-69 T 14-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 PhaeoP54_00536 f08df85dcde7407f02caef5ba5ba5fbf 257 Gene3D G3DSA:3.30.70.660 107 252 1.1E-40 T 14-10-2018 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0003723|GO:0009982 PhaeoP54_00536 f08df85dcde7407f02caef5ba5ba5fbf 257 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 3 244 4.7E-51 T 14-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 PhaeoP54_00536 f08df85dcde7407f02caef5ba5ba5fbf 257 Pfam PF01416 tRNA pseudouridine synthase 9 104 4.0E-5 T 14-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 PhaeoP54_00536 f08df85dcde7407f02caef5ba5ba5fbf 257 Pfam PF01416 tRNA pseudouridine synthase 144 250 1.0E-30 T 14-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 PhaeoP54_00536 f08df85dcde7407f02caef5ba5ba5fbf 257 Gene3D G3DSA:3.30.70.580 1 106 1.4E-29 T 14-10-2018 PhaeoP54_00536 f08df85dcde7407f02caef5ba5ba5fbf 257 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 2 249 30.938 T 14-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 PhaeoP54_00960 0f6a9b91fce7e90cc7072f0c0c091c4c 710 Gene3D G3DSA:2.170.170.11 135 253 1.5E-258 T 14-10-2018 IPR023310 Malate synthase G, beta sub-domain GO:0004474 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 PhaeoP54_00960 0f6a9b91fce7e90cc7072f0c0c091c4c 710 Gene3D G3DSA:1.20.1220.12 571 710 5.5E-68 T 14-10-2018 PhaeoP54_00960 0f6a9b91fce7e90cc7072f0c0c091c4c 710 SUPERFAMILY SSF51645 4 708 1.02E-285 T 14-10-2018 IPR011076 Malate synthase-like superfamily GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 PhaeoP54_00960 0f6a9b91fce7e90cc7072f0c0c091c4c 710 Pfam PF01274 Malate synthase 18 672 8.4E-157 T 14-10-2018 IPR001465 Malate synthase GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 PhaeoP54_00960 0f6a9b91fce7e90cc7072f0c0c091c4c 710 Gene3D G3DSA:3.20.20.360 10 569 1.5E-258 T 14-10-2018 PhaeoP54_00960 0f6a9b91fce7e90cc7072f0c0c091c4c 710 TIGRFAM TIGR01345 malate_syn_G: malate synthase G 7 708 0.0 T 14-10-2018 IPR006253 Malate synthase G GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 PhaeoP54_00960 0f6a9b91fce7e90cc7072f0c0c091c4c 710 Hamap MF_00641 Malate synthase G [glcB]. 1 710 368.005 T 14-10-2018 IPR006253 Malate synthase G GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 PhaeoP54_03983 dcaf4fae8a61e718c85e32d63f55fab9 886 Pfam PF04851 Type III restriction enzyme, res subunit 119 315 5.0E-7 T 14-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 PhaeoP54_03983 dcaf4fae8a61e718c85e32d63f55fab9 886 SUPERFAMILY SSF52540 30 393 1.96E-7 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_03983 dcaf4fae8a61e718c85e32d63f55fab9 886 Gene3D G3DSA:3.40.50.300 373 569 8.7E-6 T 14-10-2018 PhaeoP54_00469 9ae019f69679258be159b707b2322edf 306 Pfam PF01156 Inosine-uridine preferring nucleoside hydrolase 3 294 3.3E-83 T 14-10-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain PhaeoP54_00469 9ae019f69679258be159b707b2322edf 306 SUPERFAMILY SSF53590 1 302 1.96E-93 T 14-10-2018 IPR036452 Ribonucleoside hydrolase-like PhaeoP54_00469 9ae019f69679258be159b707b2322edf 306 Gene3D G3DSA:3.90.245.10 1 304 2.3E-105 T 14-10-2018 IPR036452 Ribonucleoside hydrolase-like PhaeoP54_00426 0896ee9ccea788e1a401756733da2ab9 410 Gene3D G3DSA:3.30.390.10 7 379 1.3E-148 T 14-10-2018 IPR029017 Enolase-like, N-terminal PhaeoP54_00426 0896ee9ccea788e1a401756733da2ab9 410 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 23 118 1.3E-11 T 14-10-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain PhaeoP54_00426 0896ee9ccea788e1a401756733da2ab9 410 Pfam PF13378 Enolase C-terminal domain-like 152 372 7.1E-60 T 14-10-2018 IPR029065 Enolase C-terminal domain-like PhaeoP54_00426 0896ee9ccea788e1a401756733da2ab9 410 SUPERFAMILY SSF54826 1 118 2.41E-26 T 14-10-2018 PhaeoP54_00426 0896ee9ccea788e1a401756733da2ab9 410 SMART SM00922 146 255 2.1E-21 T 14-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal PhaeoP54_00426 0896ee9ccea788e1a401756733da2ab9 410 Gene3D G3DSA:3.20.20.120 116 369 1.3E-148 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily PhaeoP54_00426 0896ee9ccea788e1a401756733da2ab9 410 SUPERFAMILY SSF51604 106 379 5.9E-74 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily PhaeoP54_03236 662c3f29a249fa7025fd67bc55260ea0 712 SUPERFAMILY SSF54211 300 492 3.14E-46 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold PhaeoP54_03236 662c3f29a249fa7025fd67bc55260ea0 712 Gene3D G3DSA:3.30.230.70 1 236 9.3E-78 T 14-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 PhaeoP54_03236 662c3f29a249fa7025fd67bc55260ea0 712 SMART SM00322 555 620 7.7E-11 T 14-10-2018 IPR004087 K Homology domain GO:0003676 PhaeoP54_03236 662c3f29a249fa7025fd67bc55260ea0 712 SUPERFAMILY SSF54791 551 639 3.45E-19 T 14-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 PhaeoP54_03236 662c3f29a249fa7025fd67bc55260ea0 712 Gene3D G3DSA:3.30.230.70 237 553 1.8E-113 T 14-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 PhaeoP54_03236 662c3f29a249fa7025fd67bc55260ea0 712 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 247 323 3.4E-13 T 14-10-2018 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 PhaeoP54_03236 662c3f29a249fa7025fd67bc55260ea0 712 SUPERFAMILY SSF55666 453 548 9.16E-28 T 14-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 PhaeoP54_03236 662c3f29a249fa7025fd67bc55260ea0 712 PIRSF PIRSF005499 1 712 1.9E-286 T 14-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 PhaeoP54_03236 662c3f29a249fa7025fd67bc55260ea0 712 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 10 693 0.0 T 14-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 PhaeoP54_03236 662c3f29a249fa7025fd67bc55260ea0 712 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 3 696 29.823 T 14-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 PhaeoP54_03236 662c3f29a249fa7025fd67bc55260ea0 712 Pfam PF00575 S1 RNA binding domain 621 693 7.0E-20 T 14-10-2018 IPR003029 S1 domain GO:0003676 PhaeoP54_03236 662c3f29a249fa7025fd67bc55260ea0 712 SUPERFAMILY SSF55666 145 241 1.31E-26 T 14-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 PhaeoP54_03236 662c3f29a249fa7025fd67bc55260ea0 712 SUPERFAMILY SSF46915 245 323 4.18E-14 T 14-10-2018 IPR036456 Polyribonucleotide nucleotidyltransferase, RNA-binding domain superfamily GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 PhaeoP54_03236 662c3f29a249fa7025fd67bc55260ea0 712 SUPERFAMILY SSF54211 2 144 2.38E-48 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold PhaeoP54_03236 662c3f29a249fa7025fd67bc55260ea0 712 Pfam PF00013 KH domain 559 616 1.2E-10 T 14-10-2018 IPR004088 K Homology domain, type 1 GO:0003723 PhaeoP54_03236 662c3f29a249fa7025fd67bc55260ea0 712 Gene3D G3DSA:3.30.1370.10 554 624 3.4E-19 T 14-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 PhaeoP54_03236 662c3f29a249fa7025fd67bc55260ea0 712 Pfam PF03725 3' exoribonuclease family, domain 2 462 533 1.4E-7 T 14-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 PhaeoP54_03236 662c3f29a249fa7025fd67bc55260ea0 712 Pfam PF03725 3' exoribonuclease family, domain 2 147 216 1.5E-8 T 14-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 PhaeoP54_03236 662c3f29a249fa7025fd67bc55260ea0 712 SMART SM00316 623 693 8.1E-25 T 14-10-2018 IPR022967 RNA-binding domain, S1 PhaeoP54_03236 662c3f29a249fa7025fd67bc55260ea0 712 Gene3D G3DSA:2.40.50.140 625 697 8.5E-30 T 14-10-2018 PhaeoP54_03236 662c3f29a249fa7025fd67bc55260ea0 712 SUPERFAMILY SSF50249 610 696 1.58E-21 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold PhaeoP54_03236 662c3f29a249fa7025fd67bc55260ea0 712 Pfam PF01138 3' exoribonuclease family, domain 1 327 459 1.3E-19 T 14-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 PhaeoP54_03236 662c3f29a249fa7025fd67bc55260ea0 712 Pfam PF01138 3' exoribonuclease family, domain 1 16 144 7.0E-21 T 14-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 PhaeoP54_03615 6cb03e06a3a92943d128a4d643fcc836 157 Gene3D G3DSA:1.20.1260.10 1 156 3.6E-40 T 14-10-2018 IPR012347 Ferritin-like PhaeoP54_03615 6cb03e06a3a92943d128a4d643fcc836 157 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 38 54 3.2E-7 T 14-10-2018 IPR002177 DNA-binding protein Dps PhaeoP54_03615 6cb03e06a3a92943d128a4d643fcc836 157 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 133 151 3.2E-7 T 14-10-2018 IPR002177 DNA-binding protein Dps PhaeoP54_03615 6cb03e06a3a92943d128a4d643fcc836 157 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 62 78 3.2E-7 T 14-10-2018 IPR002177 DNA-binding protein Dps PhaeoP54_03615 6cb03e06a3a92943d128a4d643fcc836 157 SUPERFAMILY SSF47240 13 155 5.15E-35 T 14-10-2018 IPR009078 Ferritin-like superfamily PhaeoP54_03615 6cb03e06a3a92943d128a4d643fcc836 157 PIRSF PIRSF005900 1 157 7.3E-38 T 14-10-2018 IPR002177 DNA-binding protein Dps PhaeoP54_03615 6cb03e06a3a92943d128a4d643fcc836 157 Pfam PF00210 Ferritin-like domain 18 155 5.5E-18 T 14-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 PhaeoP54_02227 02e5133e31edd4957e382d5c50cfd3eb 415 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 140 411 56.904 T 14-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 PhaeoP54_02227 02e5133e31edd4957e382d5c50cfd3eb 415 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 142 409 8.6E-100 T 14-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 PhaeoP54_02227 02e5133e31edd4957e382d5c50cfd3eb 415 SMART SM00963 120 196 3.3E-5 T 14-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 PhaeoP54_02227 02e5133e31edd4957e382d5c50cfd3eb 415 SUPERFAMILY SSF47364 137 189 9.29E-10 T 14-10-2018 IPR036225 SRP/SRP receptor, N-terminal Reactome: R-HSA-1799339 PhaeoP54_02227 02e5133e31edd4957e382d5c50cfd3eb 415 Gene3D G3DSA:3.40.50.300 210 399 7.6E-107 T 14-10-2018 PhaeoP54_02227 02e5133e31edd4957e382d5c50cfd3eb 415 Pfam PF02881 SRP54-type protein, helical bundle domain 140 189 2.4E-5 T 14-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 PhaeoP54_02227 02e5133e31edd4957e382d5c50cfd3eb 415 Gene3D G3DSA:1.20.120.140 140 409 7.6E-107 T 14-10-2018 PhaeoP54_02227 02e5133e31edd4957e382d5c50cfd3eb 415 SMART SM00382 209 392 1.1E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_02227 02e5133e31edd4957e382d5c50cfd3eb 415 SUPERFAMILY SSF52540 206 410 1.2E-51 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_02227 02e5133e31edd4957e382d5c50cfd3eb 415 Pfam PF00448 SRP54-type protein, GTPase domain 210 409 5.5E-73 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 PhaeoP54_02227 02e5133e31edd4957e382d5c50cfd3eb 415 SMART SM00962 210 411 7.2E-112 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 PhaeoP54_01723 4b251d20e614555ccfc9bd840319440f 298 SUPERFAMILY SSF53850 91 291 1.67E-31 T 14-10-2018 PhaeoP54_01723 4b251d20e614555ccfc9bd840319440f 298 Pfam PF03466 LysR substrate binding domain 89 284 8.0E-29 T 14-10-2018 IPR005119 LysR, substrate-binding PhaeoP54_01723 4b251d20e614555ccfc9bd840319440f 298 SUPERFAMILY SSF46785 4 111 7.48E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_01723 4b251d20e614555ccfc9bd840319440f 298 Gene3D G3DSA:3.40.190.290 92 285 1.2E-25 T 14-10-2018 PhaeoP54_01723 4b251d20e614555ccfc9bd840319440f 298 Gene3D G3DSA:1.10.10.10 2 85 5.0E-15 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_01723 4b251d20e614555ccfc9bd840319440f 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 1.0E-12 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PhaeoP54_02078 795c61c0f13de41fb8d3090c6b8f7842 79 Gene3D G3DSA:1.20.58.660 11 79 3.7E-17 T 14-10-2018 PhaeoP54_02078 795c61c0f13de41fb8d3090c6b8f7842 79 Pfam PF04325 Protein of unknown function (DUF465) 29 75 6.5E-12 T 14-10-2018 IPR007420 Protein of unknown function DUF465 PhaeoP54_00681 ec38a5eb0e6b3875ab01680c263fc499 270 SMART SM00346 1 89 0.0046 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 PhaeoP54_00681 ec38a5eb0e6b3875ab01680c263fc499 270 Gene3D G3DSA:3.30.450.40 75 255 2.0E-35 T 14-10-2018 IPR029016 GAF-like domain superfamily PhaeoP54_00681 ec38a5eb0e6b3875ab01680c263fc499 270 SUPERFAMILY SSF55781 57 238 6.15E-33 T 14-10-2018 PhaeoP54_00681 ec38a5eb0e6b3875ab01680c263fc499 270 SUPERFAMILY SSF46785 3 68 7.31E-12 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_00681 ec38a5eb0e6b3875ab01680c263fc499 270 Gene3D G3DSA:1.10.10.10 2 69 5.2E-13 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_00681 ec38a5eb0e6b3875ab01680c263fc499 270 Pfam PF09339 IclR helix-turn-helix domain 4 50 7.4E-9 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 PhaeoP54_00681 ec38a5eb0e6b3875ab01680c263fc499 270 Pfam PF01614 Bacterial transcriptional regulator 128 236 2.0E-16 T 14-10-2018 IPR014757 Transcription regulator IclR, C-terminal PhaeoP54_00364 8dfc6296218b0bd7d110024bf989ffaa 307 Pfam PF01925 Sulfite exporter TauE/SafE 18 287 8.8E-49 T 14-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 PhaeoP54_03046 b93281e70e65d2602b86972aa6ae0a1d 290 Pfam PF03466 LysR substrate binding domain 82 286 1.3E-43 T 14-10-2018 IPR005119 LysR, substrate-binding PhaeoP54_03046 b93281e70e65d2602b86972aa6ae0a1d 290 Gene3D G3DSA:1.10.10.10 1 82 2.7E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_03046 b93281e70e65d2602b86972aa6ae0a1d 290 Gene3D G3DSA:3.40.190.10 86 282 2.5E-59 T 14-10-2018 PhaeoP54_03046 b93281e70e65d2602b86972aa6ae0a1d 290 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 1 56 2.7E-17 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PhaeoP54_03046 b93281e70e65d2602b86972aa6ae0a1d 290 Gene3D G3DSA:3.40.190.10 157 257 2.5E-59 T 14-10-2018 PhaeoP54_03046 b93281e70e65d2602b86972aa6ae0a1d 290 SUPERFAMILY SSF46785 1 105 1.91E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_03046 b93281e70e65d2602b86972aa6ae0a1d 290 SUPERFAMILY SSF53850 82 289 9.23E-44 T 14-10-2018 PhaeoP54_02683 ca000cd9674204edbb3fbf26063af2eb 284 SUPERFAMILY SSF54675 5 116 5.1E-31 T 14-10-2018 PhaeoP54_02683 ca000cd9674204edbb3fbf26063af2eb 284 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 17 284 8.5E-97 T 14-10-2018 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|Reactome: R-HSA-196807 PhaeoP54_02683 ca000cd9674204edbb3fbf26063af2eb 284 SUPERFAMILY SSF51690 117 284 3.14E-54 T 14-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 PhaeoP54_02683 ca000cd9674204edbb3fbf26063af2eb 284 Gene3D G3DSA:3.20.20.70 131 274 7.8E-100 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PhaeoP54_02683 ca000cd9674204edbb3fbf26063af2eb 284 Gene3D G3DSA:3.90.1170.20 20 282 7.8E-100 T 14-10-2018 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily GO:0016763 Reactome: R-HSA-196807 PhaeoP54_02683 ca000cd9674204edbb3fbf26063af2eb 284 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 27 115 2.7E-25 T 14-10-2018 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 PhaeoP54_02683 ca000cd9674204edbb3fbf26063af2eb 284 PIRSF PIRSF006250 10 284 9.8E-89 T 14-10-2018 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD Reactome: R-HSA-196807 PhaeoP54_02683 ca000cd9674204edbb3fbf26063af2eb 284 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 117 283 3.6E-57 T 14-10-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 Reactome: R-HSA-196807 PhaeoP54_00965 961e2e81c5f9637fd550284f5cfe85d6 193 SUPERFAMILY SSF46689 5 80 2.35E-20 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PhaeoP54_00965 961e2e81c5f9637fd550284f5cfe85d6 193 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 34 57 2.2E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PhaeoP54_00965 961e2e81c5f9637fd550284f5cfe85d6 193 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 13 26 2.2E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PhaeoP54_00965 961e2e81c5f9637fd550284f5cfe85d6 193 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 59 4.6E-18 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PhaeoP54_00965 961e2e81c5f9637fd550284f5cfe85d6 193 Gene3D G3DSA:1.10.357.10 4 192 5.9E-31 T 14-10-2018 PhaeoP54_00710 e0b5a59767b5a5d355a5c2f3fe7dd839 204 SUPERFAMILY SSF47616 87 201 1.02E-17 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily PhaeoP54_00710 e0b5a59767b5a5d355a5c2f3fe7dd839 204 Gene3D G3DSA:3.40.30.10 1 82 5.1E-26 T 14-10-2018 PhaeoP54_00710 e0b5a59767b5a5d355a5c2f3fe7dd839 204 Gene3D G3DSA:1.20.1050.10 83 194 2.5E-12 T 14-10-2018 PhaeoP54_00710 e0b5a59767b5a5d355a5c2f3fe7dd839 204 Pfam PF02798 Glutathione S-transferase, N-terminal domain 10 73 6.9E-11 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 PhaeoP54_00710 e0b5a59767b5a5d355a5c2f3fe7dd839 204 Pfam PF00043 Glutathione S-transferase, C-terminal domain 116 188 1.7E-6 T 14-10-2018 IPR004046 Glutathione S-transferase, C-terminal PhaeoP54_00710 e0b5a59767b5a5d355a5c2f3fe7dd839 204 SUPERFAMILY SSF52833 1 83 9.61E-16 T 14-10-2018 IPR036249 Thioredoxin-like superfamily PhaeoP54_02039 9171e0a39354273834786252a2feb478 359 Gene3D G3DSA:3.40.190.10 51 306 2.2E-33 T 14-10-2018 PhaeoP54_02039 9171e0a39354273834786252a2feb478 359 Gene3D G3DSA:3.40.190.10 148 257 2.2E-33 T 14-10-2018 PhaeoP54_02039 9171e0a39354273834786252a2feb478 359 SUPERFAMILY SSF53850 37 328 1.37E-46 T 14-10-2018 PhaeoP54_02039 9171e0a39354273834786252a2feb478 359 Pfam PF13343 Bacterial extracellular solute-binding protein 97 293 2.2E-13 T 14-10-2018 PhaeoP54_01543 263879169ea42e7da37e9a32c542e176 253 Gene3D G3DSA:3.40.630.30 8 162 4.1E-26 T 14-10-2018 PhaeoP54_01543 263879169ea42e7da37e9a32c542e176 253 SUPERFAMILY SSF55729 6 221 8.07E-43 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase PhaeoP54_01543 263879169ea42e7da37e9a32c542e176 253 Pfam PF13444 Acetyltransferase (GNAT) domain 25 127 7.9E-32 T 14-10-2018 PhaeoP54_01606 85408bb7776a39dff6b002c64418dae1 756 Gene3D G3DSA:3.30.365.10 143 364 3.0E-59 T 14-10-2018 PhaeoP54_01606 85408bb7776a39dff6b002c64418dae1 756 SUPERFAMILY SSF54665 7 159 3.27E-39 T 14-10-2018 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily PhaeoP54_01606 85408bb7776a39dff6b002c64418dae1 756 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 27 139 4.3E-26 T 14-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead PhaeoP54_01606 85408bb7776a39dff6b002c64418dae1 756 Gene3D G3DSA:3.90.1170.50 2 139 6.5E-40 T 14-10-2018 PhaeoP54_01606 85408bb7776a39dff6b002c64418dae1 756 Gene3D G3DSA:3.30.365.10 382 744 1.2E-98 T 14-10-2018 PhaeoP54_01606 85408bb7776a39dff6b002c64418dae1 756 SMART SM01008 27 139 3.8E-40 T 14-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead PhaeoP54_01606 85408bb7776a39dff6b002c64418dae1 756 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 169 689 7.1E-129 T 14-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PhaeoP54_01606 85408bb7776a39dff6b002c64418dae1 756 Gene3D G3DSA:3.30.365.10 204 298 3.0E-59 T 14-10-2018 PhaeoP54_01606 85408bb7776a39dff6b002c64418dae1 756 Gene3D G3DSA:3.30.365.10 455 604 1.2E-98 T 14-10-2018 PhaeoP54_01606 85408bb7776a39dff6b002c64418dae1 756 SUPERFAMILY SSF56003 131 751 1.96E-172 T 14-10-2018 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GO:0016491|GO:0055114 PhaeoP54_01595 d19595b38986a3cce9d75def921ee8af 472 Pfam PF13091 PLD-like domain 315 440 7.6E-29 T 14-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 PhaeoP54_01595 d19595b38986a3cce9d75def921ee8af 472 Pfam PF13091 PLD-like domain 126 260 8.8E-9 T 14-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 PhaeoP54_01595 d19595b38986a3cce9d75def921ee8af 472 SUPERFAMILY SSF56024 263 450 5.83E-47 T 14-10-2018 PhaeoP54_01595 d19595b38986a3cce9d75def921ee8af 472 Gene3D G3DSA:3.30.870.10 107 286 3.8E-41 T 14-10-2018 PhaeoP54_01595 d19595b38986a3cce9d75def921ee8af 472 SUPERFAMILY SSF56024 101 302 2.17E-47 T 14-10-2018 PhaeoP54_01595 d19595b38986a3cce9d75def921ee8af 472 Gene3D G3DSA:3.30.870.10 295 469 1.1E-32 T 14-10-2018 PhaeoP54_01595 d19595b38986a3cce9d75def921ee8af 472 SMART SM00155 209 236 9.4E-6 T 14-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 PhaeoP54_01595 d19595b38986a3cce9d75def921ee8af 472 SMART SM00155 386 413 1.0E-6 T 14-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 PhaeoP54_01595 d19595b38986a3cce9d75def921ee8af 472 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 29 472 6.3E-107 T 14-10-2018 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 PhaeoP54_03163 c6e9384511ee0b6dd337a992a5ac7790 496 SUPERFAMILY SSF56672 11 234 1.69E-41 T 14-10-2018 PhaeoP54_03163 c6e9384511ee0b6dd337a992a5ac7790 496 Pfam PF00817 impB/mucB/samB family 35 156 3.5E-9 T 14-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 PhaeoP54_03163 c6e9384511ee0b6dd337a992a5ac7790 496 Gene3D G3DSA:1.10.150.20 177 224 5.4E-10 T 14-10-2018 PhaeoP54_03163 c6e9384511ee0b6dd337a992a5ac7790 496 Gene3D G3DSA:3.30.70.270 81 176 5.4E-10 T 14-10-2018 PhaeoP54_03163 c6e9384511ee0b6dd337a992a5ac7790 496 Gene3D G3DSA:2.30.40.20 44 80 5.4E-10 T 14-10-2018 PhaeoP54_00331 2c3b6adb7d614ed6348f2bfecc0ee7b6 985 Gene3D G3DSA:3.40.50.11610 766 979 1.1E-168 T 14-10-2018 PhaeoP54_00331 2c3b6adb7d614ed6348f2bfecc0ee7b6 985 Gene3D G3DSA:1.10.287.1150 118 198 1.1E-25 T 14-10-2018 PhaeoP54_00331 2c3b6adb7d614ed6348f2bfecc0ee7b6 985 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 99 980 0.0 T 14-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 PhaeoP54_00331 2c3b6adb7d614ed6348f2bfecc0ee7b6 985 Gene3D G3DSA:3.40.50.970 200 566 5.2E-151 T 14-10-2018 PhaeoP54_00331 2c3b6adb7d614ed6348f2bfecc0ee7b6 985 Pfam PF16078 2-oxoglutarate dehydrogenase N-terminus 13 52 8.0E-16 T 14-10-2018 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 PhaeoP54_00331 2c3b6adb7d614ed6348f2bfecc0ee7b6 985 PIRSF PIRSF000157 1 983 0.0 T 14-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 PhaeoP54_00331 2c3b6adb7d614ed6348f2bfecc0ee7b6 985 Pfam PF02779 Transketolase, pyrimidine binding domain 629 824 3.0E-64 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain PhaeoP54_00331 2c3b6adb7d614ed6348f2bfecc0ee7b6 985 SMART SM00861 630 823 1.1E-57 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain PhaeoP54_00331 2c3b6adb7d614ed6348f2bfecc0ee7b6 985 Gene3D G3DSA:3.40.50.12470 589 846 1.1E-168 T 14-10-2018 PhaeoP54_00331 2c3b6adb7d614ed6348f2bfecc0ee7b6 985 SUPERFAMILY SSF52518 153 577 3.46E-91 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold PhaeoP54_00331 2c3b6adb7d614ed6348f2bfecc0ee7b6 985 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 828 981 1.1E-55 T 14-10-2018 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 PhaeoP54_00331 2c3b6adb7d614ed6348f2bfecc0ee7b6 985 SUPERFAMILY SSF52518 614 829 6.08E-51 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold PhaeoP54_00331 2c3b6adb7d614ed6348f2bfecc0ee7b6 985 Pfam PF00676 Dehydrogenase E1 component 240 560 2.5E-58 T 14-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 PhaeoP54_00137 282f2697add69cf1f152b2f5eba3aa35 370 SUPERFAMILY SSF50331 239 359 9.35E-9 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal PhaeoP54_00137 282f2697add69cf1f152b2f5eba3aa35 370 SMART SM00382 31 214 1.7E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_00137 282f2697add69cf1f152b2f5eba3aa35 370 Gene3D G3DSA:2.40.50.940 226 358 3.0E-9 T 14-10-2018 PhaeoP54_00137 282f2697add69cf1f152b2f5eba3aa35 370 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PhaeoP54_00137 282f2697add69cf1f152b2f5eba3aa35 370 Gene3D G3DSA:3.40.50.300 7 225 6.7E-59 T 14-10-2018 PhaeoP54_00137 282f2697add69cf1f152b2f5eba3aa35 370 Gene3D G3DSA:2.40.50.140 292 354 3.0E-9 T 14-10-2018 PhaeoP54_00137 282f2697add69cf1f152b2f5eba3aa35 370 Pfam PF08402 TOBE domain 286 360 1.3E-6 T 14-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 PhaeoP54_00137 282f2697add69cf1f152b2f5eba3aa35 370 SUPERFAMILY SSF52540 7 245 5.2E-78 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_00137 282f2697add69cf1f152b2f5eba3aa35 370 Pfam PF00005 ABC transporter 23 164 9.0E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PhaeoP54_02026 0799e5fa8048d1c30cd5fe8dbb063174 385 PRINTS PR00599 Methionine aminopeptidase-1 signature 238 254 2.0E-5 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 PhaeoP54_02026 0799e5fa8048d1c30cd5fe8dbb063174 385 PRINTS PR00599 Methionine aminopeptidase-1 signature 336 348 2.0E-5 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 PhaeoP54_02026 0799e5fa8048d1c30cd5fe8dbb063174 385 SUPERFAMILY SSF53092 5 156 9.24E-34 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal PhaeoP54_02026 0799e5fa8048d1c30cd5fe8dbb063174 385 Gene3D G3DSA:3.90.230.10 157 385 5.1E-46 T 14-10-2018 PhaeoP54_02026 0799e5fa8048d1c30cd5fe8dbb063174 385 SUPERFAMILY SSF55920 157 384 1.83E-51 T 14-10-2018 IPR036005 Creatinase/aminopeptidase-like PhaeoP54_02026 0799e5fa8048d1c30cd5fe8dbb063174 385 Gene3D G3DSA:3.40.350.10 4 156 2.2E-30 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal PhaeoP54_02026 0799e5fa8048d1c30cd5fe8dbb063174 385 Pfam PF01321 Creatinase/Prolidase N-terminal domain 18 158 7.5E-18 T 14-10-2018 IPR000587 Creatinase, N-terminal GO:0016787 PhaeoP54_02026 0799e5fa8048d1c30cd5fe8dbb063174 385 Pfam PF00557 Metallopeptidase family M24 167 367 1.2E-33 T 14-10-2018 IPR000994 Peptidase M24 PhaeoP54_03276 a16aeb58ac45c8d2d6e3199e60fea0cc 857 SUPERFAMILY SSF52374 7 676 3.99E-142 T 14-10-2018 PhaeoP54_03276 a16aeb58ac45c8d2d6e3199e60fea0cc 857 Pfam PF08264 Anticodon-binding domain of tRNA 701 819 3.9E-16 T 14-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 PhaeoP54_03276 a16aeb58ac45c8d2d6e3199e60fea0cc 857 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 41 52 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 PhaeoP54_03276 a16aeb58ac45c8d2d6e3199e60fea0cc 857 SUPERFAMILY SSF50677 225 417 4.19E-43 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 PhaeoP54_03276 a16aeb58ac45c8d2d6e3199e60fea0cc 857 PRINTS PR00985 Leucyl-tRNA synthetase signature 495 513 9.0E-43 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 PhaeoP54_03276 a16aeb58ac45c8d2d6e3199e60fea0cc 857 PRINTS PR00985 Leucyl-tRNA synthetase signature 152 168 9.0E-43 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 PhaeoP54_03276 a16aeb58ac45c8d2d6e3199e60fea0cc 857 PRINTS PR00985 Leucyl-tRNA synthetase signature 214 233 9.0E-43 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 PhaeoP54_03276 a16aeb58ac45c8d2d6e3199e60fea0cc 857 PRINTS PR00985 Leucyl-tRNA synthetase signature 126 143 9.0E-43 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 PhaeoP54_03276 a16aeb58ac45c8d2d6e3199e60fea0cc 857 PRINTS PR00985 Leucyl-tRNA synthetase signature 568 578 9.0E-43 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 PhaeoP54_03276 a16aeb58ac45c8d2d6e3199e60fea0cc 857 PRINTS PR00985 Leucyl-tRNA synthetase signature 184 197 9.0E-43 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 PhaeoP54_03276 a16aeb58ac45c8d2d6e3199e60fea0cc 857 PRINTS PR00985 Leucyl-tRNA synthetase signature 533 555 9.0E-43 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 PhaeoP54_03276 a16aeb58ac45c8d2d6e3199e60fea0cc 857 Gene3D G3DSA:3.90.740.10 226 417 4.2E-292 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 PhaeoP54_03276 a16aeb58ac45c8d2d6e3199e60fea0cc 857 SUPERFAMILY SSF47323 675 856 3.92E-33 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 PhaeoP54_03276 a16aeb58ac45c8d2d6e3199e60fea0cc 857 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 628 667 5.9E-8 T 14-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 PhaeoP54_03276 a16aeb58ac45c8d2d6e3199e60fea0cc 857 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 13 171 1.0E-23 T 14-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 PhaeoP54_03276 a16aeb58ac45c8d2d6e3199e60fea0cc 857 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 7 856 6.0E-284 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 PhaeoP54_03276 a16aeb58ac45c8d2d6e3199e60fea0cc 857 Gene3D G3DSA:3.10.330.110 578 637 4.2E-292 T 14-10-2018 PhaeoP54_03276 a16aeb58ac45c8d2d6e3199e60fea0cc 857 Gene3D G3DSA:1.10.730.10 8 789 4.2E-292 T 14-10-2018 PhaeoP54_03276 a16aeb58ac45c8d2d6e3199e60fea0cc 857 Gene3D G3DSA:3.10.20.590 797 857 7.1E-21 T 14-10-2018 PhaeoP54_03276 a16aeb58ac45c8d2d6e3199e60fea0cc 857 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 3 857 21.708 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 PhaeoP54_03276 a16aeb58ac45c8d2d6e3199e60fea0cc 857 Gene3D G3DSA:3.40.50.620 32 577 4.2E-292 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PhaeoP54_03276 a16aeb58ac45c8d2d6e3199e60fea0cc 857 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 220 371 8.2E-58 T 14-10-2018 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 PhaeoP54_03980 00f0b7a5ba6bf12926c2e75348601378 187 ProSitePatterns PS00397 Site-specific recombinases active site. 5 13 - T 14-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 PhaeoP54_03980 00f0b7a5ba6bf12926c2e75348601378 187 Pfam PF00239 Resolvase, N terminal domain 3 138 9.4E-45 T 14-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 PhaeoP54_03980 00f0b7a5ba6bf12926c2e75348601378 187 SUPERFAMILY SSF53041 1 139 1.96E-43 T 14-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 PhaeoP54_03980 00f0b7a5ba6bf12926c2e75348601378 187 Gene3D G3DSA:3.40.50.1390 1 128 4.5E-46 T 14-10-2018 PhaeoP54_03980 00f0b7a5ba6bf12926c2e75348601378 187 SUPERFAMILY SSF46689 141 184 1.79E-5 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PhaeoP54_03980 00f0b7a5ba6bf12926c2e75348601378 187 ProSitePatterns PS00398 Site-specific recombinases signature 2. 58 70 - T 14-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 PhaeoP54_03980 00f0b7a5ba6bf12926c2e75348601378 187 SMART SM00857 2 139 1.5E-58 T 14-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 PhaeoP54_00112 be67ded64d4a6af5315bf60e13bd240c 235 SUPERFAMILY SSF46785 6 88 1.62E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_00112 be67ded64d4a6af5315bf60e13bd240c 235 SMART SM00418 10 89 9.9E-17 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 PhaeoP54_00112 be67ded64d4a6af5315bf60e13bd240c 235 Gene3D G3DSA:1.10.10.10 7 102 5.0E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_00112 be67ded64d4a6af5315bf60e13bd240c 235 Pfam PF12840 Helix-turn-helix domain 13 69 1.5E-6 T 14-10-2018 PhaeoP54_00112 be67ded64d4a6af5315bf60e13bd240c 235 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 45 60 5.4E-7 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 PhaeoP54_00112 be67ded64d4a6af5315bf60e13bd240c 235 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 12 27 5.4E-7 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 PhaeoP54_00112 be67ded64d4a6af5315bf60e13bd240c 235 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 60 75 5.4E-7 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 PhaeoP54_01126 4c041bd1e621867c65fa5b9f6f991163 175 Gene3D G3DSA:3.30.460.10 3 170 2.0E-44 T 14-10-2018 PhaeoP54_01126 4c041bd1e621867c65fa5b9f6f991163 175 SUPERFAMILY SSF81301 4 166 5.56E-43 T 14-10-2018 PhaeoP54_01126 4c041bd1e621867c65fa5b9f6f991163 175 Pfam PF04229 GrpB protein 4 163 2.1E-42 T 14-10-2018 IPR007344 GrpB/Dephospho-CoA kinase PhaeoP54_02091 e849cec97836963f04865eeb4cb331c9 591 SUPERFAMILY SSF116726 305 388 1.11E-13 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 PhaeoP54_02091 e849cec97836963f04865eeb4cb331c9 591 Pfam PF03600 Citrate transporter 19 538 1.4E-36 T 14-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 PhaeoP54_02091 e849cec97836963f04865eeb4cb331c9 591 Pfam PF02080 TrkA-C domain 311 382 1.4E-6 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 PhaeoP54_02091 e849cec97836963f04865eeb4cb331c9 591 Pfam PF02080 TrkA-C domain 218 287 2.5E-8 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 PhaeoP54_02091 e849cec97836963f04865eeb4cb331c9 591 SUPERFAMILY SSF116726 212 287 3.27E-13 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 PhaeoP54_02091 e849cec97836963f04865eeb4cb331c9 591 Gene3D G3DSA:3.30.70.1450 214 291 5.8E-12 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 PhaeoP54_02091 e849cec97836963f04865eeb4cb331c9 591 ProSitePatterns PS01271 Sodium:sulfate symporter family signature. 539 555 - T 14-10-2018 IPR031312 Sodium/sulphate symporter, conserved site Reactome: R-HSA-433137 PhaeoP54_02091 e849cec97836963f04865eeb4cb331c9 591 Gene3D G3DSA:3.30.70.1450 300 381 9.8E-8 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 PhaeoP54_03573 fb50b4f089fe09593d9f9bf9df10c24c 404 TIGRFAM TIGR01224 hutI: imidazolonepropionase 29 403 4.3E-139 T 14-10-2018 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 PhaeoP54_03573 fb50b4f089fe09593d9f9bf9df10c24c 404 Pfam PF01979 Amidohydrolase family 64 382 1.8E-18 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 PhaeoP54_03573 fb50b4f089fe09593d9f9bf9df10c24c 404 SUPERFAMILY SSF51556 67 364 7.52E-86 T 14-10-2018 IPR032466 Metal-dependent hydrolase PhaeoP54_03573 fb50b4f089fe09593d9f9bf9df10c24c 404 SUPERFAMILY SSF51338 6 403 4.97E-28 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 PhaeoP54_03573 fb50b4f089fe09593d9f9bf9df10c24c 404 Hamap MF_00372 Imidazolonepropionase [hutI]. 6 404 40.526 T 14-10-2018 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 PhaeoP54_03573 fb50b4f089fe09593d9f9bf9df10c24c 404 Gene3D G3DSA:2.30.40.10 11 402 8.6E-159 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 PhaeoP54_03573 fb50b4f089fe09593d9f9bf9df10c24c 404 Gene3D G3DSA:3.20.20.140 68 365 8.6E-159 T 14-10-2018 PhaeoP54_00281 5e4f751cabec1bec46ee351eec30885e 1131 Gene3D G3DSA:3.30.2090.10 183 273 1.5E-222 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PhaeoP54_00281 5e4f751cabec1bec46ee351eec30885e 1131 SUPERFAMILY SSF82714 186 266 8.76E-8 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PhaeoP54_00281 5e4f751cabec1bec46ee351eec30885e 1131 SUPERFAMILY SSF82866 811 1032 3.53E-39 T 14-10-2018 PhaeoP54_00281 5e4f751cabec1bec46ee351eec30885e 1131 Gene3D G3DSA:3.30.2090.10 728 814 1.5E-222 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PhaeoP54_00281 5e4f751cabec1bec46ee351eec30885e 1131 Gene3D G3DSA:1.20.1640.10 505 1029 1.5E-222 T 14-10-2018 PhaeoP54_00281 5e4f751cabec1bec46ee351eec30885e 1131 Gene3D G3DSA:1.20.1640.10 21 504 1.5E-222 T 14-10-2018 PhaeoP54_00281 5e4f751cabec1bec46ee351eec30885e 1131 Pfam PF00873 AcrB/AcrD/AcrF family 14 1028 3.9E-140 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PhaeoP54_00281 5e4f751cabec1bec46ee351eec30885e 1131 PRINTS PR00702 Acriflavin resistance protein family signature 440 463 3.8E-17 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PhaeoP54_00281 5e4f751cabec1bec46ee351eec30885e 1131 PRINTS PR00702 Acriflavin resistance protein family signature 19 43 3.8E-17 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PhaeoP54_00281 5e4f751cabec1bec46ee351eec30885e 1131 PRINTS PR00702 Acriflavin resistance protein family signature 332 355 3.8E-17 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PhaeoP54_00281 5e4f751cabec1bec46ee351eec30885e 1131 PRINTS PR00702 Acriflavin resistance protein family signature 386 410 3.8E-17 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PhaeoP54_00281 5e4f751cabec1bec46ee351eec30885e 1131 PRINTS PR00702 Acriflavin resistance protein family signature 47 65 3.8E-17 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PhaeoP54_00281 5e4f751cabec1bec46ee351eec30885e 1131 SUPERFAMILY SSF82693 51 138 1.05E-17 T 14-10-2018 PhaeoP54_00281 5e4f751cabec1bec46ee351eec30885e 1131 Gene3D G3DSA:3.30.70.1440 679 876 1.5E-222 T 14-10-2018 PhaeoP54_00281 5e4f751cabec1bec46ee351eec30885e 1131 Gene3D G3DSA:3.30.70.1430 566 678 1.5E-222 T 14-10-2018 PhaeoP54_00281 5e4f751cabec1bec46ee351eec30885e 1131 SUPERFAMILY SSF82866 297 489 4.97E-34 T 14-10-2018 PhaeoP54_00281 5e4f751cabec1bec46ee351eec30885e 1131 Gene3D G3DSA:3.30.70.1320 142 326 1.5E-222 T 14-10-2018 PhaeoP54_00281 5e4f751cabec1bec46ee351eec30885e 1131 Gene3D G3DSA:3.30.70.1430 49 822 1.5E-222 T 14-10-2018 PhaeoP54_02757 716a94e6ebdae76ccabfa8736facc87e 203 Pfam PF00043 Glutathione S-transferase, C-terminal domain 105 189 5.9E-11 T 14-10-2018 IPR004046 Glutathione S-transferase, C-terminal PhaeoP54_02757 716a94e6ebdae76ccabfa8736facc87e 203 Pfam PF02798 Glutathione S-transferase, N-terminal domain 1 74 6.3E-11 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 PhaeoP54_02757 716a94e6ebdae76ccabfa8736facc87e 203 SUPERFAMILY SSF47616 81 199 1.36E-23 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily PhaeoP54_02757 716a94e6ebdae76ccabfa8736facc87e 203 Gene3D G3DSA:3.40.30.10 3 196 5.1E-69 T 14-10-2018 PhaeoP54_02757 716a94e6ebdae76ccabfa8736facc87e 203 SUPERFAMILY SSF52833 1 78 2.11E-17 T 14-10-2018 IPR036249 Thioredoxin-like superfamily PhaeoP54_02757 716a94e6ebdae76ccabfa8736facc87e 203 Gene3D G3DSA:1.20.1050.10 83 189 5.1E-69 T 14-10-2018 PhaeoP54_04042 b243392295d08a1728363634b2ddb091 218 SMART SM00382 30 200 2.8E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_04042 b243392295d08a1728363634b2ddb091 218 SUPERFAMILY SSF52540 2 211 1.47E-36 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_04042 b243392295d08a1728363634b2ddb091 218 Gene3D G3DSA:3.40.50.300 1 216 8.4E-34 T 14-10-2018 PhaeoP54_04042 b243392295d08a1728363634b2ddb091 218 Pfam PF00005 ABC transporter 22 151 2.3E-13 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PhaeoP54_04042 b243392295d08a1728363634b2ddb091 218 ProSitePatterns PS00211 ABC transporters family signature. 123 137 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PhaeoP54_03540 92236f2e11130bf7f2117e615da8b15f 204 SMART SM00474 1 169 1.4E-32 T 14-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 PhaeoP54_03540 92236f2e11130bf7f2117e615da8b15f 204 SUPERFAMILY SSF53098 13 191 9.83E-52 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily PhaeoP54_03540 92236f2e11130bf7f2117e615da8b15f 204 Gene3D G3DSA:3.30.420.10 7 189 2.3E-42 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 PhaeoP54_03540 92236f2e11130bf7f2117e615da8b15f 204 Pfam PF01612 3'-5' exonuclease 18 168 1.7E-35 T 14-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 PhaeoP54_03402 1e585e648b732de5eaaff4c493142fcb 196 SUPERFAMILY SSF75420 9 90 6.28E-22 T 14-10-2018 IPR035956 RimP, N-terminal domain superfamily PhaeoP54_03402 1e585e648b732de5eaaff4c493142fcb 196 Gene3D G3DSA:3.30.300.70 7 87 5.6E-20 T 14-10-2018 IPR035956 RimP, N-terminal domain superfamily PhaeoP54_03402 1e585e648b732de5eaaff4c493142fcb 196 Pfam PF02576 RimP N-terminal domain 18 90 1.5E-24 T 14-10-2018 IPR028989 Ribosome maturation factor RimP, N-terminal PhaeoP54_03402 1e585e648b732de5eaaff4c493142fcb 196 Pfam PF17384 RimP C-terminal SH3 domain 93 161 2.0E-12 T 14-10-2018 IPR028998 Ribosome maturation factor RimP, C-terminal PhaeoP54_03402 1e585e648b732de5eaaff4c493142fcb 196 SUPERFAMILY SSF74942 91 163 3.14E-17 T 14-10-2018 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily PhaeoP54_03402 1e585e648b732de5eaaff4c493142fcb 196 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 13 162 23.101 T 14-10-2018 IPR003728 Ribosome maturation factor RimP GO:0042274 PhaeoP54_01141 17a56282f072264eca524b4dd0559124 1036 SUPERFAMILY SSF47323 732 983 3.36E-51 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 PhaeoP54_01141 17a56282f072264eca524b4dd0559124 1036 Hamap MF_02004 Valine--tRNA ligase [valS]. 3 1033 14.464 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 PhaeoP54_01141 17a56282f072264eca524b4dd0559124 1036 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 45 56 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 PhaeoP54_01141 17a56282f072264eca524b4dd0559124 1036 Gene3D G3DSA:1.10.287.380 961 1033 4.8E-16 T 14-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 PhaeoP54_01141 17a56282f072264eca524b4dd0559124 1036 PRINTS PR00986 Valyl-tRNA synthetase signature 38 49 1.2E-28 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 PhaeoP54_01141 17a56282f072264eca524b4dd0559124 1036 PRINTS PR00986 Valyl-tRNA synthetase signature 625 643 1.2E-28 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 PhaeoP54_01141 17a56282f072264eca524b4dd0559124 1036 PRINTS PR00986 Valyl-tRNA synthetase signature 265 282 1.2E-28 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 PhaeoP54_01141 17a56282f072264eca524b4dd0559124 1036 PRINTS PR00986 Valyl-tRNA synthetase signature 594 615 1.2E-28 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 PhaeoP54_01141 17a56282f072264eca524b4dd0559124 1036 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 18 713 1.4E-173 T 14-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 PhaeoP54_01141 17a56282f072264eca524b4dd0559124 1036 SUPERFAMILY SSF52374 2 730 2.71E-127 T 14-10-2018 PhaeoP54_01141 17a56282f072264eca524b4dd0559124 1036 TIGRFAM TIGR00422 valS: valine--tRNA ligase 3 1015 4.2E-277 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 PhaeoP54_01141 17a56282f072264eca524b4dd0559124 1036 Gene3D G3DSA:3.40.50.620 4 213 1.8E-62 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PhaeoP54_01141 17a56282f072264eca524b4dd0559124 1036 SUPERFAMILY SSF46589 968 1032 6.28E-14 T 14-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 PhaeoP54_01141 17a56282f072264eca524b4dd0559124 1036 Gene3D G3DSA:3.40.50.620 408 675 4.5E-39 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PhaeoP54_01141 17a56282f072264eca524b4dd0559124 1036 SUPERFAMILY SSF50677 208 403 3.4E-45 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 PhaeoP54_01141 17a56282f072264eca524b4dd0559124 1036 Pfam PF08264 Anticodon-binding domain of tRNA 765 907 9.6E-35 T 14-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 PhaeoP54_01141 17a56282f072264eca524b4dd0559124 1036 Gene3D G3DSA:1.10.730.10 676 903 3.3E-68 T 14-10-2018 PhaeoP54_01141 17a56282f072264eca524b4dd0559124 1036 Gene3D G3DSA:3.90.740.10 214 406 4.3E-37 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 PhaeoP54_01141 17a56282f072264eca524b4dd0559124 1036 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 968 1032 2.1E-18 T 14-10-2018 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 PhaeoP54_01834 a4df28a7d56ce68032b81d85b667288d 508 Hamap MF_00195 GTPase Der [der]. 24 483 35.828 T 14-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 PhaeoP54_01834 a4df28a7d56ce68032b81d85b667288d 508 Pfam PF01926 50S ribosome-binding GTPase 27 142 1.6E-25 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 PhaeoP54_01834 a4df28a7d56ce68032b81d85b667288d 508 Pfam PF01926 50S ribosome-binding GTPase 224 342 2.5E-20 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 PhaeoP54_01834 a4df28a7d56ce68032b81d85b667288d 508 SUPERFAMILY SSF52540 25 190 2.53E-39 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_01834 a4df28a7d56ce68032b81d85b667288d 508 Gene3D G3DSA:3.40.50.300 24 182 2.1E-39 T 14-10-2018 PhaeoP54_01834 a4df28a7d56ce68032b81d85b667288d 508 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 26 144 7.6E-20 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 PhaeoP54_01834 a4df28a7d56ce68032b81d85b667288d 508 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 222 386 5.9E-26 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 PhaeoP54_01834 a4df28a7d56ce68032b81d85b667288d 508 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 400 480 4.2E-31 T 14-10-2018 IPR032859 GTPase Der, C-terminal KH-domain-like PhaeoP54_01834 a4df28a7d56ce68032b81d85b667288d 508 PRINTS PR00449 Transforming protein P21 ras signature 332 345 8.9E-7 T 14-10-2018 PhaeoP54_01834 a4df28a7d56ce68032b81d85b667288d 508 PRINTS PR00449 Transforming protein P21 ras signature 372 394 8.9E-7 T 14-10-2018 PhaeoP54_01834 a4df28a7d56ce68032b81d85b667288d 508 PRINTS PR00449 Transforming protein P21 ras signature 223 244 8.9E-7 T 14-10-2018 PhaeoP54_01834 a4df28a7d56ce68032b81d85b667288d 508 PRINTS PR00449 Transforming protein P21 ras signature 263 285 8.9E-7 T 14-10-2018 PhaeoP54_01834 a4df28a7d56ce68032b81d85b667288d 508 Gene3D G3DSA:3.30.300.20 400 482 4.4E-30 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta PhaeoP54_01834 a4df28a7d56ce68032b81d85b667288d 508 PIRSF PIRSF006485 23 490 8.2E-154 T 14-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 PhaeoP54_01834 a4df28a7d56ce68032b81d85b667288d 508 SUPERFAMILY SSF52540 160 484 2.18E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_01834 a4df28a7d56ce68032b81d85b667288d 508 Gene3D G3DSA:3.40.50.300 218 396 8.0E-48 T 14-10-2018 PhaeoP54_01834 a4df28a7d56ce68032b81d85b667288d 508 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 26 480 8.9E-162 T 14-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 PhaeoP54_00549 8b4f2d206612dbea4cdf44f297044f16 217 TIGRFAM TIGR00875 fsa_talC_mipB: fructose-6-phosphate aldolase 1 211 2.1E-86 T 14-10-2018 IPR004731 Transaldolase type 3B/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723 PhaeoP54_00549 8b4f2d206612dbea4cdf44f297044f16 217 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 3 204 1.5E-60 T 14-10-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 PhaeoP54_00549 8b4f2d206612dbea4cdf44f297044f16 217 Hamap MF_00494 Probable transaldolase [tal]. 1 214 44.988 T 14-10-2018 IPR022999 Transaldolase type 3B, putative GO:0004801 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723 PhaeoP54_00549 8b4f2d206612dbea4cdf44f297044f16 217 ProSitePatterns PS00958 Transaldolase active site. 80 97 - T 14-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 PhaeoP54_00549 8b4f2d206612dbea4cdf44f297044f16 217 Gene3D G3DSA:3.20.20.70 1 216 5.3E-88 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PhaeoP54_00549 8b4f2d206612dbea4cdf44f297044f16 217 SUPERFAMILY SSF51569 1 211 2.41E-78 T 14-10-2018 PhaeoP54_00549 8b4f2d206612dbea4cdf44f297044f16 217 ProSitePatterns PS01054 Transaldolase signature 1. 24 32 - T 14-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 PhaeoP54_01374 c175ad661d6ba32db3fcc25dce5c583b 374 SUPERFAMILY SSF55811 191 366 2.71E-39 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 PhaeoP54_01374 c175ad661d6ba32db3fcc25dce5c583b 374 Gene3D G3DSA:3.90.79.10 170 373 1.5E-52 T 14-10-2018 PhaeoP54_01374 c175ad661d6ba32db3fcc25dce5c583b 374 TIGRFAM TIGR00052 TIGR00052: nudix-type nucleoside diphosphatase, YffH/AdpP family 184 362 5.0E-32 T 14-10-2018 IPR004385 Nucleoside diphosphate pyrophosphatase GO:0016818|GO:0046872 Reactome: R-HSA-480985 PhaeoP54_01374 c175ad661d6ba32db3fcc25dce5c583b 374 PRINTS PR00502 NUDIX hydrolase family signature 257 271 2.1E-5 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 PhaeoP54_01374 c175ad661d6ba32db3fcc25dce5c583b 374 PRINTS PR00502 NUDIX hydrolase family signature 271 286 2.1E-5 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 PhaeoP54_01374 c175ad661d6ba32db3fcc25dce5c583b 374 Gene3D G3DSA:3.10.490.10 2 106 1.1E-19 T 14-10-2018 PhaeoP54_01374 c175ad661d6ba32db3fcc25dce5c583b 374 ProSitePatterns PS00893 Nudix box signature. 262 283 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 PhaeoP54_01374 c175ad661d6ba32db3fcc25dce5c583b 374 Pfam PF06094 Gamma-glutamyl cyclotransferase, AIG2-like 4 107 4.3E-12 T 14-10-2018 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like PhaeoP54_01374 c175ad661d6ba32db3fcc25dce5c583b 374 SUPERFAMILY SSF110857 4 109 5.62E-9 T 14-10-2018 IPR036568 Gamma-glutamyl cyclotransferase-like superfamily PhaeoP54_01374 c175ad661d6ba32db3fcc25dce5c583b 374 Pfam PF00293 NUDIX domain 222 342 1.6E-16 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 PhaeoP54_00236 1833657dd97bb9483d5d6df6feff60bb 554 SUPERFAMILY SSF48452 321 527 5.94E-18 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 PhaeoP54_00236 1833657dd97bb9483d5d6df6feff60bb 554 SUPERFAMILY SSF46894 6 80 1.56E-10 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PhaeoP54_00236 1833657dd97bb9483d5d6df6feff60bb 554 SUPERFAMILY SSF52964 160 262 3.79E-7 T 14-10-2018 PhaeoP54_00236 1833657dd97bb9483d5d6df6feff60bb 554 Gene3D G3DSA:1.25.40.10 255 548 5.4E-21 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 PhaeoP54_00236 1833657dd97bb9483d5d6df6feff60bb 554 Pfam PF14559 Tetratricopeptide repeat 467 522 2.2E-6 T 14-10-2018 PhaeoP54_00236 1833657dd97bb9483d5d6df6feff60bb 554 Gene3D G3DSA:1.10.10.10 1 95 6.6E-12 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_00236 1833657dd97bb9483d5d6df6feff60bb 554 Pfam PF00486 Transcriptional regulatory protein, C terminal 20 80 9.9E-5 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PhaeoP54_00236 1833657dd97bb9483d5d6df6feff60bb 554 SMART SM00862 20 94 0.007 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PhaeoP54_02058 f6f73b16ea49018fa20b7e2758819fb4 514 Pfam PF02541 Ppx/GppA phosphatase family 45 322 5.9E-40 T 14-10-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 PhaeoP54_02058 f6f73b16ea49018fa20b7e2758819fb4 514 SUPERFAMILY SSF53067 154 324 1.21E-35 T 14-10-2018 PhaeoP54_02058 f6f73b16ea49018fa20b7e2758819fb4 514 SUPERFAMILY SSF53067 30 151 3.02E-35 T 14-10-2018 PhaeoP54_02058 f6f73b16ea49018fa20b7e2758819fb4 514 Gene3D G3DSA:3.30.420.40 22 134 4.3E-34 T 14-10-2018 PhaeoP54_02058 f6f73b16ea49018fa20b7e2758819fb4 514 SUPERFAMILY SSF109604 342 484 1.19E-12 T 14-10-2018 PhaeoP54_02058 f6f73b16ea49018fa20b7e2758819fb4 514 Gene3D G3DSA:3.30.420.150 135 318 1.1E-40 T 14-10-2018 PhaeoP54_02058 f6f73b16ea49018fa20b7e2758819fb4 514 Gene3D G3DSA:1.10.3210.10 320 511 6.4E-47 T 14-10-2018 PhaeoP54_03283 178617d32da3cbb8f851cb3208d15174 249 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 PhaeoP54_03283 178617d32da3cbb8f851cb3208d15174 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 6.3E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_03283 178617d32da3cbb8f851cb3208d15174 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 6.3E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_03283 178617d32da3cbb8f851cb3208d15174 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 6.3E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_03283 178617d32da3cbb8f851cb3208d15174 249 Gene3D G3DSA:3.40.50.720 1 246 1.1E-66 T 14-10-2018 PhaeoP54_03283 178617d32da3cbb8f851cb3208d15174 249 SUPERFAMILY SSF51735 1 237 5.2E-68 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PhaeoP54_03283 178617d32da3cbb8f851cb3208d15174 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 4.1E-25 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_03283 178617d32da3cbb8f851cb3208d15174 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 4.1E-25 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_03283 178617d32da3cbb8f851cb3208d15174 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 4.1E-25 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_03283 178617d32da3cbb8f851cb3208d15174 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 4.1E-25 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_03283 178617d32da3cbb8f851cb3208d15174 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 4.1E-25 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_03283 178617d32da3cbb8f851cb3208d15174 249 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 189 0.0011 T 14-10-2018 PhaeoP54_03283 178617d32da3cbb8f851cb3208d15174 249 Pfam PF00106 short chain dehydrogenase 6 193 1.4E-54 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_02426 b30de333365c25141a60a5ef2e264bf0 539 SUPERFAMILY SSF81442 68 528 3.01E-117 T 14-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PhaeoP54_02426 b30de333365c25141a60a5ef2e264bf0 539 TIGRFAM TIGR00780 ccoN: cytochrome c oxidase, cbb3-type, subunit I 67 529 1.2E-201 T 14-10-2018 IPR004677 Cytochrome c oxidase cbb3-type, subunit I GO:0004129|GO:0045278|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 PhaeoP54_02426 b30de333365c25141a60a5ef2e264bf0 539 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 264 319 - T 14-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PhaeoP54_02426 b30de333365c25141a60a5ef2e264bf0 539 Gene3D G3DSA:1.20.210.10 63 534 4.8E-183 T 14-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PhaeoP54_02426 b30de333365c25141a60a5ef2e264bf0 539 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 73 504 1.3E-106 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PhaeoP54_02477 ffa40283e9c2cfd8ab17a1777878a2e5 576 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 513 524 - T 14-10-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PhaeoP54_02477 ffa40283e9c2cfd8ab17a1777878a2e5 576 ProSitePatterns PS00644 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 1. 339 354 - T 14-10-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PhaeoP54_02477 ffa40283e9c2cfd8ab17a1777878a2e5 576 SUPERFAMILY SSF142019 194 409 1.01E-69 T 14-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PhaeoP54_02477 ffa40283e9c2cfd8ab17a1777878a2e5 576 SUPERFAMILY SSF52833 42 204 9.84E-38 T 14-10-2018 IPR036249 Thioredoxin-like superfamily PhaeoP54_02477 ffa40283e9c2cfd8ab17a1777878a2e5 576 Gene3D G3DSA:3.40.30.10 114 188 4.5E-12 T 14-10-2018 PhaeoP54_02477 ffa40283e9c2cfd8ab17a1777878a2e5 576 Gene3D G3DSA:1.20.1440.230 499 576 5.3E-22 T 14-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PhaeoP54_02477 ffa40283e9c2cfd8ab17a1777878a2e5 576 Gene3D G3DSA:3.40.50.11540 234 403 2.4E-65 T 14-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PhaeoP54_02477 ffa40283e9c2cfd8ab17a1777878a2e5 576 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 229 391 1.0E-46 T 14-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PhaeoP54_02477 ffa40283e9c2cfd8ab17a1777878a2e5 576 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 52 187 5.0E-30 T 14-10-2018 PhaeoP54_02477 ffa40283e9c2cfd8ab17a1777878a2e5 576 Gene3D G3DSA:3.10.20.600 406 496 2.0E-23 T 14-10-2018 PhaeoP54_02477 ffa40283e9c2cfd8ab17a1777878a2e5 576 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 501 576 9.1E-20 T 14-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PhaeoP54_02477 ffa40283e9c2cfd8ab17a1777878a2e5 576 SMART SM00928 500 545 1.4E-15 T 14-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PhaeoP54_02477 ffa40283e9c2cfd8ab17a1777878a2e5 576 Gene3D G3DSA:1.10.10.1590 40 109 9.7E-11 T 14-10-2018 PhaeoP54_02477 ffa40283e9c2cfd8ab17a1777878a2e5 576 Pfam PF10531 SLBB domain 416 462 6.3E-10 T 14-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PhaeoP54_02477 ffa40283e9c2cfd8ab17a1777878a2e5 576 SUPERFAMILY SSF140490 499 575 3.53E-23 T 14-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PhaeoP54_02477 ffa40283e9c2cfd8ab17a1777878a2e5 576 SUPERFAMILY SSF142984 413 495 3.14E-22 T 14-10-2018 PhaeoP54_00346 f4ff629adab0792ebf44428d35d44fbc 601 TIGRFAM TIGR01816 sdhA_forward: succinate dehydrogenase, flavoprotein subunit 9 585 4.7E-279 T 14-10-2018 IPR011281 Succinate dehydrogenase, flavoprotein subunit GO:0006099|GO:0016627|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 PhaeoP54_00346 f4ff629adab0792ebf44428d35d44fbc 601 Gene3D G3DSA:1.20.58.100 435 550 4.7E-36 T 14-10-2018 PhaeoP54_00346 f4ff629adab0792ebf44428d35d44fbc 601 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 46 55 - T 14-10-2018 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 PhaeoP54_00346 f4ff629adab0792ebf44428d35d44fbc 601 SUPERFAMILY SSF56425 240 358 1.35E-42 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 PhaeoP54_00346 f4ff629adab0792ebf44428d35d44fbc 601 SUPERFAMILY SSF46977 454 600 1.22E-41 T 14-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 PhaeoP54_00346 f4ff629adab0792ebf44428d35d44fbc 601 Pfam PF02910 Fumarate reductase flavoprotein C-term 463 581 5.7E-39 T 14-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 PhaeoP54_00346 f4ff629adab0792ebf44428d35d44fbc 601 PIRSF PIRSF000171 1 586 3.0E-40 T 14-10-2018 PhaeoP54_00346 f4ff629adab0792ebf44428d35d44fbc 601 Gene3D G3DSA:3.90.700.10 250 353 4.8E-167 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 PhaeoP54_00346 f4ff629adab0792ebf44428d35d44fbc 601 SUPERFAMILY SSF51905 3 444 4.47E-79 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PhaeoP54_00346 f4ff629adab0792ebf44428d35d44fbc 601 Gene3D G3DSA:3.50.50.60 12 419 4.8E-167 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PhaeoP54_00346 f4ff629adab0792ebf44428d35d44fbc 601 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 12 582 4.4E-234 T 14-10-2018 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 PhaeoP54_00346 f4ff629adab0792ebf44428d35d44fbc 601 Pfam PF00890 FAD binding domain 12 408 7.3E-124 T 14-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 PhaeoP54_00756 79250afd1e73857dfbbbd9f582d8ec50 359 Gene3D G3DSA:3.40.190.10 54 340 2.8E-101 T 14-10-2018 PhaeoP54_00756 79250afd1e73857dfbbbd9f582d8ec50 359 Gene3D G3DSA:3.40.190.10 148 353 2.8E-101 T 14-10-2018 PhaeoP54_00756 79250afd1e73857dfbbbd9f582d8ec50 359 SUPERFAMILY SSF53850 54 319 5.33E-29 T 14-10-2018 PhaeoP54_00756 79250afd1e73857dfbbbd9f582d8ec50 359 Pfam PF13531 Bacterial extracellular solute-binding protein 54 300 3.8E-8 T 14-10-2018 PhaeoP54_00063 bea36e57ba6a43ae2fa6405cde875c6a 287 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 10 268 41.372 T 14-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 PhaeoP54_00063 bea36e57ba6a43ae2fa6405cde875c6a 287 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 16 268 1.5E-93 T 14-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 PhaeoP54_00063 bea36e57ba6a43ae2fa6405cde875c6a 287 SUPERFAMILY SSF51621 15 266 2.71E-101 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 PhaeoP54_00063 bea36e57ba6a43ae2fa6405cde875c6a 287 PIRSF PIRSF000388 1 271 7.6E-106 T 14-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 PhaeoP54_00063 bea36e57ba6a43ae2fa6405cde875c6a 287 Pfam PF02548 Ketopantoate hydroxymethyltransferase 14 263 6.8E-107 T 14-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 PhaeoP54_00063 bea36e57ba6a43ae2fa6405cde875c6a 287 Gene3D G3DSA:3.20.20.60 11 275 1.2E-105 T 14-10-2018 PhaeoP54_01889 889e586774202762814bc69b5d218da6 285 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 29 275 1.1E-75 T 14-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 PhaeoP54_01889 889e586774202762814bc69b5d218da6 285 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 7 278 2.7E-58 T 14-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 PhaeoP54_01889 889e586774202762814bc69b5d218da6 285 Gene3D G3DSA:1.10.8.10 6 89 7.0E-18 T 14-10-2018 PhaeoP54_01889 889e586774202762814bc69b5d218da6 285 Pfam PF05175 Methyltransferase small domain 101 190 6.5E-13 T 14-10-2018 IPR007848 Methyltransferase small domain GO:0008168 PhaeoP54_01889 889e586774202762814bc69b5d218da6 285 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 7 279 39.779 T 14-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 PhaeoP54_01889 889e586774202762814bc69b5d218da6 285 Gene3D G3DSA:3.40.50.150 90 282 1.1E-52 T 14-10-2018 PhaeoP54_01889 889e586774202762814bc69b5d218da6 285 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 183 189 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 PhaeoP54_01889 889e586774202762814bc69b5d218da6 285 SUPERFAMILY SSF53335 10 277 1.42E-49 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PhaeoP54_03125 add09f3c204bbe62e917fb9f916cc7c1 267 SUPERFAMILY SSF81336 103 259 1.15E-43 T 14-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 PhaeoP54_03125 add09f3c204bbe62e917fb9f916cc7c1 267 Gene3D G3DSA:1.20.120.220 104 266 2.3E-32 T 14-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 PhaeoP54_03125 add09f3c204bbe62e917fb9f916cc7c1 267 Hamap MF_01393 ATP synthase subunit a [atpB]. 27 266 15.104 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 PhaeoP54_03125 add09f3c204bbe62e917fb9f916cc7c1 267 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 52 262 1.3E-60 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 PhaeoP54_03125 add09f3c204bbe62e917fb9f916cc7c1 267 PRINTS PR00123 ATP synthase A subunit signature 112 128 3.4E-27 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 PhaeoP54_03125 add09f3c204bbe62e917fb9f916cc7c1 267 PRINTS PR00123 ATP synthase A subunit signature 173 188 3.4E-27 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 PhaeoP54_03125 add09f3c204bbe62e917fb9f916cc7c1 267 PRINTS PR00123 ATP synthase A subunit signature 193 215 3.4E-27 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 PhaeoP54_03125 add09f3c204bbe62e917fb9f916cc7c1 267 PRINTS PR00123 ATP synthase A subunit signature 246 261 3.4E-27 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 PhaeoP54_03125 add09f3c204bbe62e917fb9f916cc7c1 267 Pfam PF00119 ATP synthase A chain 55 259 5.6E-57 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 PhaeoP54_02346 d4abf30edc048eb651318333368bf10c 347 Pfam PF13437 HlyD family secretion protein 149 248 7.3E-10 T 14-10-2018 PhaeoP54_02346 d4abf30edc048eb651318333368bf10c 347 Gene3D G3DSA:2.40.30.170 39 262 2.6E-59 T 14-10-2018 PhaeoP54_02346 d4abf30edc048eb651318333368bf10c 347 Gene3D G3DSA:1.10.287.470 88 145 2.6E-59 T 14-10-2018 PhaeoP54_02346 d4abf30edc048eb651318333368bf10c 347 Gene3D G3DSA:2.40.50.100 54 184 2.6E-59 T 14-10-2018 PhaeoP54_02346 d4abf30edc048eb651318333368bf10c 347 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 30 340 1.0E-56 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 PhaeoP54_02346 d4abf30edc048eb651318333368bf10c 347 Gene3D G3DSA:2.40.420.20 35 339 2.6E-59 T 14-10-2018 PhaeoP54_02346 d4abf30edc048eb651318333368bf10c 347 Pfam PF13533 Biotin-lipoyl like 54 99 1.9E-5 T 14-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain PhaeoP54_02346 d4abf30edc048eb651318333368bf10c 347 ProSitePatterns PS00141 Eukaryotic and viral aspartyl proteases active site. 259 270 - T 14-10-2018 IPR001969 Aspartic peptidase, active site GO:0004190|GO:0006508 PhaeoP54_02346 d4abf30edc048eb651318333368bf10c 347 SUPERFAMILY SSF111369 43 258 3.79E-20 T 14-10-2018 PhaeoP54_00374 f90ee67bf084d80d46f25d017d6d0173 255 SUPERFAMILY SSF47240 27 254 2.03E-43 T 14-10-2018 IPR009078 Ferritin-like superfamily PhaeoP54_00374 f90ee67bf084d80d46f25d017d6d0173 255 Gene3D G3DSA:1.20.1260.10 2 255 1.2E-54 T 14-10-2018 IPR012347 Ferritin-like PhaeoP54_00374 f90ee67bf084d80d46f25d017d6d0173 255 Pfam PF05138 Phenylacetic acid catabolic protein 21 253 6.4E-25 T 14-10-2018 IPR007814 1,2-phenylacetyl-CoA epoxidase, subunit A/C GO:0010124 PhaeoP54_01175 e93c6633f3e8a17ab87f01a2780952eb 436 Pfam PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain 347 420 3.9E-16 T 14-10-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 PhaeoP54_01175 e93c6633f3e8a17ab87f01a2780952eb 436 SMART SM00941 347 421 4.0E-20 T 14-10-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 PhaeoP54_01175 e93c6633f3e8a17ab87f01a2780952eb 436 SUPERFAMILY SSF54680 334 435 7.46E-25 T 14-10-2018 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 PhaeoP54_01175 e93c6633f3e8a17ab87f01a2780952eb 436 Gene3D G3DSA:1.20.970.10 3 67 2.9E-15 T 14-10-2018 PhaeoP54_01175 e93c6633f3e8a17ab87f01a2780952eb 436 TIGRFAM TIGR02644 Y_phosphoryl: pyrimidine-nucleoside phosphorylase 5 420 3.4E-136 T 14-10-2018 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic GO:0006213|GO:0016154 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181|Reactome: R-HSA-73614|Reactome: R-HSA-73621 PhaeoP54_01175 e93c6633f3e8a17ab87f01a2780952eb 436 SUPERFAMILY SSF52418 69 330 6.41E-84 T 14-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 PhaeoP54_01175 e93c6633f3e8a17ab87f01a2780952eb 436 PIRSF PIRSF000478 1 436 4.3E-142 T 14-10-2018 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase GO:0004645|GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 PhaeoP54_01175 e93c6633f3e8a17ab87f01a2780952eb 436 Gene3D G3DSA:3.40.1030.10 76 332 8.0E-126 T 14-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 PhaeoP54_01175 e93c6633f3e8a17ab87f01a2780952eb 436 Hamap MF_01628 Thymidine phosphorylase [deoA]. 1 435 42.505 T 14-10-2018 IPR013465 Thymidine phosphorylase GO:0006213|GO:0009032 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181 PhaeoP54_01175 e93c6633f3e8a17ab87f01a2780952eb 436 SUPERFAMILY SSF47648 1 69 7.98E-16 T 14-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 PhaeoP54_01175 e93c6633f3e8a17ab87f01a2780952eb 436 Pfam PF00591 Glycosyl transferase family, a/b domain 76 305 1.9E-36 T 14-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 PhaeoP54_01175 e93c6633f3e8a17ab87f01a2780952eb 436 Gene3D G3DSA:3.90.1170.30 333 422 8.0E-126 T 14-10-2018 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 PhaeoP54_01175 e93c6633f3e8a17ab87f01a2780952eb 436 ProSitePatterns PS00647 Thymidine and pyrimidine-nucleoside phosphorylases signature. 109 124 - T 14-10-2018 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 PhaeoP54_01175 e93c6633f3e8a17ab87f01a2780952eb 436 Pfam PF02885 Glycosyl transferase family, helical bundle domain 6 66 1.9E-15 T 14-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 PhaeoP54_00299 13adf68aad258d97646031faf4dafb28 156 Gene3D G3DSA:1.10.287.180 1 75 7.6E-31 T 14-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 PhaeoP54_00299 13adf68aad258d97646031faf4dafb28 156 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 154 31.477 T 14-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 PhaeoP54_00299 13adf68aad258d97646031faf4dafb28 156 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 48 - T 14-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 PhaeoP54_00299 13adf68aad258d97646031faf4dafb28 156 Gene3D G3DSA:3.10.50.30 76 156 7.9E-28 T 14-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 PhaeoP54_00299 13adf68aad258d97646031faf4dafb28 156 Pfam PF03449 Transcription elongation factor, N-terminal 4 74 1.2E-30 T 14-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 PhaeoP54_00299 13adf68aad258d97646031faf4dafb28 156 SUPERFAMILY SSF46557 3 77 2.88E-27 T 14-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 PhaeoP54_00299 13adf68aad258d97646031faf4dafb28 156 SUPERFAMILY SSF54534 82 155 1.83E-22 T 14-10-2018 PhaeoP54_00299 13adf68aad258d97646031faf4dafb28 156 PIRSF PIRSF006092 1 156 2.8E-50 T 14-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 PhaeoP54_00299 13adf68aad258d97646031faf4dafb28 156 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 82 155 2.4E-27 T 14-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 PhaeoP54_00299 13adf68aad258d97646031faf4dafb28 156 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 5 153 8.1E-57 T 14-10-2018 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 PhaeoP54_03060 b8bd6278d51e0345a4fc3f14cbf2a72e 65 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 7 60 5.7E-17 T 14-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 PhaeoP54_03060 b8bd6278d51e0345a4fc3f14cbf2a72e 65 Hamap MF_00422 Protein translocase subunit SecE [secE]. 4 60 11.612 T 14-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 PhaeoP54_03060 b8bd6278d51e0345a4fc3f14cbf2a72e 65 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 7 58 1.3E-16 T 14-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 PhaeoP54_03060 b8bd6278d51e0345a4fc3f14cbf2a72e 65 Gene3D G3DSA:1.20.5.1030 4 60 7.4E-15 T 14-10-2018 IPR038379 SecE superfamily PhaeoP54_03577 847340420544634a36bbc79357eaa92d 373 SMART SM00062 45 372 6.5E-27 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PhaeoP54_03577 847340420544634a36bbc79357eaa92d 373 SUPERFAMILY SSF53850 24 371 2.34E-51 T 14-10-2018 PhaeoP54_03577 847340420544634a36bbc79357eaa92d 373 Gene3D G3DSA:1.10.287.70 149 243 6.9E-10 T 14-10-2018 PhaeoP54_03577 847340420544634a36bbc79357eaa92d 373 SUPERFAMILY SSF81324 147 245 7.59E-12 T 14-10-2018 PhaeoP54_03577 847340420544634a36bbc79357eaa92d 373 Gene3D G3DSA:3.40.190.10 244 328 3.1E-12 T 14-10-2018 PhaeoP54_03577 847340420544634a36bbc79357eaa92d 373 Pfam PF00060 Ligand-gated ion channel 162 262 1.6E-10 T 14-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 PhaeoP54_03577 847340420544634a36bbc79357eaa92d 373 Gene3D G3DSA:3.40.190.10 329 373 5.8E-7 T 14-10-2018 PhaeoP54_03577 847340420544634a36bbc79357eaa92d 373 SMART SM00079 45 371 2.1E-6 T 14-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 PhaeoP54_03577 847340420544634a36bbc79357eaa92d 373 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 46 371 1.9E-50 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PhaeoP54_03577 847340420544634a36bbc79357eaa92d 373 Gene3D G3DSA:3.40.190.10 37 148 2.8E-26 T 14-10-2018 PhaeoP54_03681 2c42fe597e441426fc899a4063a7879f 228 Gene3D G3DSA:2.70.70.10 90 218 3.9E-12 T 14-10-2018 IPR011055 Duplicated hybrid motif PhaeoP54_03681 2c42fe597e441426fc899a4063a7879f 228 Pfam PF01551 Peptidase family M23 111 201 2.6E-8 T 14-10-2018 IPR016047 Peptidase M23 PhaeoP54_03681 2c42fe597e441426fc899a4063a7879f 228 SUPERFAMILY SSF51261 110 198 5.02E-6 T 14-10-2018 IPR011055 Duplicated hybrid motif PhaeoP54_00874 c81605009e354c08c81b8d0e7b9ecc26 322 Gene3D G3DSA:3.40.50.720 1 236 5.1E-71 T 14-10-2018 PhaeoP54_00874 c81605009e354c08c81b8d0e7b9ecc26 322 SUPERFAMILY SSF69572 2 228 3.53E-69 T 14-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 PhaeoP54_00874 c81605009e354c08c81b8d0e7b9ecc26 322 Pfam PF00899 ThiF family 5 219 8.0E-52 T 14-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 PhaeoP54_02632 5eb4b6d5dc1137b4d6875dd0d2e9e8f0 143 Pfam PF00072 Response regulator receiver domain 10 128 9.4E-18 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PhaeoP54_02632 5eb4b6d5dc1137b4d6875dd0d2e9e8f0 143 SMART SM00448 7 128 3.3E-20 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PhaeoP54_02632 5eb4b6d5dc1137b4d6875dd0d2e9e8f0 143 SUPERFAMILY SSF52172 2 131 6.69E-26 T 14-10-2018 IPR011006 CheY-like superfamily PhaeoP54_02632 5eb4b6d5dc1137b4d6875dd0d2e9e8f0 143 Gene3D G3DSA:3.40.50.2300 1 138 8.0E-29 T 14-10-2018 PhaeoP54_03307 6f65bbd00ca95c5a1d1215bd02403860 431 SUPERFAMILY SSF53822 32 388 1.16E-84 T 14-10-2018 IPR028082 Periplasmic binding protein-like I PhaeoP54_03307 6f65bbd00ca95c5a1d1215bd02403860 431 Pfam PF13433 Periplasmic binding protein domain 33 400 8.2E-161 T 14-10-2018 PhaeoP54_03307 6f65bbd00ca95c5a1d1215bd02403860 431 Gene3D G3DSA:3.40.50.2300 35 368 3.0E-127 T 14-10-2018 PhaeoP54_03307 6f65bbd00ca95c5a1d1215bd02403860 431 Gene3D G3DSA:3.40.50.2300 148 387 3.0E-127 T 14-10-2018 PhaeoP54_03307 6f65bbd00ca95c5a1d1215bd02403860 431 TIGRFAM TIGR03407 urea_ABC_UrtA: urea ABC transporter, urea binding protein 33 395 3.3E-160 T 14-10-2018 IPR017777 Urea ABC transporter, substrate-binding protein UrtA-like PhaeoP54_03436 83d61edebb8e19e1719bdbc4f721ee8d 751 SMART SM01274 20 153 4.4E-83 T 14-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 PhaeoP54_03436 83d61edebb8e19e1719bdbc4f721ee8d 751 Gene3D G3DSA:3.40.50.10380 2 162 1.8E-67 T 14-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 PhaeoP54_03436 83d61edebb8e19e1719bdbc4f721ee8d 751 SUPERFAMILY SSF51735 165 453 4.96E-87 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PhaeoP54_03436 83d61edebb8e19e1719bdbc4f721ee8d 751 Gene3D G3DSA:3.40.50.10950 446 747 1.9E-75 T 14-10-2018 PhaeoP54_03436 83d61edebb8e19e1719bdbc4f721ee8d 751 SUPERFAMILY SSF53659 430 748 7.67E-71 T 14-10-2018 PhaeoP54_03436 83d61edebb8e19e1719bdbc4f721ee8d 751 Pfam PF03949 Malic enzyme, NAD binding domain 167 363 7.1E-23 T 14-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 PhaeoP54_03436 83d61edebb8e19e1719bdbc4f721ee8d 751 Gene3D G3DSA:3.40.50.720 163 445 9.3E-84 T 14-10-2018 PhaeoP54_03436 83d61edebb8e19e1719bdbc4f721ee8d 751 Pfam PF01515 Phosphate acetyl/butaryl transferase 432 747 4.4E-71 T 14-10-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 PhaeoP54_03436 83d61edebb8e19e1719bdbc4f721ee8d 751 ProSitePatterns PS00331 Malic enzymes signature. 161 177 - T 14-10-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 PhaeoP54_03436 83d61edebb8e19e1719bdbc4f721ee8d 751 SMART SM00919 165 401 2.4E-144 T 14-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 PhaeoP54_03436 83d61edebb8e19e1719bdbc4f721ee8d 751 PIRSF PIRSF036684 1 751 0.0 T 14-10-2018 IPR012188 NAD(P)-dependent malic enzyme GO:0004470|GO:0006108|GO:0046872 KEGG: 00620+1.1.1.40|KEGG: 00710+1.1.1.40|MetaCyc: PWY-241|MetaCyc: PWY-7117 PhaeoP54_03436 83d61edebb8e19e1719bdbc4f721ee8d 751 Pfam PF00390 Malic enzyme, N-terminal domain 22 153 1.1E-27 T 14-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 PhaeoP54_03436 83d61edebb8e19e1719bdbc4f721ee8d 751 Gene3D G3DSA:3.40.50.10750 572 723 1.9E-75 T 14-10-2018 PhaeoP54_03436 83d61edebb8e19e1719bdbc4f721ee8d 751 SUPERFAMILY SSF53223 12 163 1.51E-54 T 14-10-2018 PhaeoP54_01266 a0b1158dcf3a9bd1a74ec9d07ea85d96 279 Pfam PF00005 ABC transporter 45 186 1.4E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PhaeoP54_01266 a0b1158dcf3a9bd1a74ec9d07ea85d96 279 Gene3D G3DSA:3.40.50.300 23 260 1.1E-60 T 14-10-2018 PhaeoP54_01266 a0b1158dcf3a9bd1a74ec9d07ea85d96 279 SMART SM00382 54 237 7.3E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_01266 a0b1158dcf3a9bd1a74ec9d07ea85d96 279 SUPERFAMILY SSF52540 26 250 2.66E-63 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_01266 a0b1158dcf3a9bd1a74ec9d07ea85d96 279 ProSitePatterns PS00211 ABC transporters family signature. 159 173 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PhaeoP54_03087 b2191ede816c9cf26c68ff45a8bd60ce 241 Gene3D G3DSA:1.20.1440.120 94 227 1.2E-5 T 14-10-2018 PhaeoP54_03087 b2191ede816c9cf26c68ff45a8bd60ce 241 TIGRFAM TIGR00613 reco: DNA repair protein RecO 3 176 2.4E-32 T 14-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 PhaeoP54_03087 b2191ede816c9cf26c68ff45a8bd60ce 241 Hamap MF_00201 DNA repair protein RecO [recO]. 1 237 18.113 T 14-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 PhaeoP54_03087 b2191ede816c9cf26c68ff45a8bd60ce 241 ProDom PD202328 DNA REPAIR RECOMBINATION RECO DAMAGE O O RECO-RELATED RECOMBINATIONAL RP549 132 235 4.0E-30 T 14-10-2018 PhaeoP54_03087 b2191ede816c9cf26c68ff45a8bd60ce 241 Pfam PF11967 Recombination protein O N terminal 1 76 7.0E-19 T 14-10-2018 IPR022572 DNA replication/recombination mediator RecO, N-terminal PhaeoP54_03087 b2191ede816c9cf26c68ff45a8bd60ce 241 Pfam PF02565 Recombination protein O C terminal 86 219 4.0E-22 T 14-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 PhaeoP54_03087 b2191ede816c9cf26c68ff45a8bd60ce 241 SUPERFAMILY SSF50249 1 68 4.28E-10 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold PhaeoP54_03087 b2191ede816c9cf26c68ff45a8bd60ce 241 Gene3D G3DSA:2.40.50.140 1 72 5.8E-9 T 14-10-2018 PhaeoP54_03087 b2191ede816c9cf26c68ff45a8bd60ce 241 SUPERFAMILY SSF57863 94 184 3.92E-10 T 14-10-2018 IPR037278 ARFGAP/RecO-like zinc finger PhaeoP54_02238 3234d448219aa0ea4905b4845c1e1a03 254 Pfam PF13545 Crp-like helix-turn-helix domain 182 246 1.5E-16 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 PhaeoP54_02238 3234d448219aa0ea4905b4845c1e1a03 254 Gene3D G3DSA:1.10.10.10 177 249 4.4E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_02238 3234d448219aa0ea4905b4845c1e1a03 254 SUPERFAMILY SSF51206 37 171 1.96E-29 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like PhaeoP54_02238 3234d448219aa0ea4905b4845c1e1a03 254 SUPERFAMILY SSF46785 179 250 2.3E-14 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_02238 3234d448219aa0ea4905b4845c1e1a03 254 PRINTS PR00103 cAMP-dependent protein kinase signature 109 118 2.3E-6 T 14-10-2018 PhaeoP54_02238 3234d448219aa0ea4905b4845c1e1a03 254 PRINTS PR00103 cAMP-dependent protein kinase signature 64 78 2.3E-6 T 14-10-2018 PhaeoP54_02238 3234d448219aa0ea4905b4845c1e1a03 254 PRINTS PR00103 cAMP-dependent protein kinase signature 121 132 2.3E-6 T 14-10-2018 PhaeoP54_02238 3234d448219aa0ea4905b4845c1e1a03 254 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 199 215 1.1E-5 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 PhaeoP54_02238 3234d448219aa0ea4905b4845c1e1a03 254 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 215 230 1.1E-5 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 PhaeoP54_02238 3234d448219aa0ea4905b4845c1e1a03 254 SMART SM00100 43 161 5.8E-23 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain PhaeoP54_02238 3234d448219aa0ea4905b4845c1e1a03 254 SMART SM00419 193 241 7.6E-10 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 PhaeoP54_02238 3234d448219aa0ea4905b4845c1e1a03 254 Gene3D G3DSA:2.60.120.10 37 176 1.0E-33 T 14-10-2018 IPR014710 RmlC-like jelly roll fold PhaeoP54_02238 3234d448219aa0ea4905b4845c1e1a03 254 ProSitePatterns PS00889 Cyclic nucleotide-binding domain signature 2. 111 128 - T 14-10-2018 IPR018488 Cyclic nucleotide-binding, conserved site PhaeoP54_02238 3234d448219aa0ea4905b4845c1e1a03 254 Pfam PF00027 Cyclic nucleotide-binding domain 64 148 5.8E-20 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain PhaeoP54_01734 c28b2f96737bf7e62583043447b234c2 192 Pfam PF06041 Bacterial protein of unknown function (DUF924) 7 180 9.9E-59 T 14-10-2018 IPR010323 Protein of unknown function DUF924 PhaeoP54_01734 c28b2f96737bf7e62583043447b234c2 192 Gene3D G3DSA:1.25.40.10 80 184 5.2E-30 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 PhaeoP54_01734 c28b2f96737bf7e62583043447b234c2 192 Gene3D G3DSA:1.20.58.320 2 79 1.6E-28 T 14-10-2018 PhaeoP54_01734 c28b2f96737bf7e62583043447b234c2 192 SUPERFAMILY SSF48452 2 177 5.31E-67 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 PhaeoP54_01485 8290dac10622cdf438908f56a0827897 158 SUPERFAMILY SSF52788 1 137 6.93E-35 T 14-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily PhaeoP54_01485 8290dac10622cdf438908f56a0827897 158 SMART SM00226 1 137 1.9E-33 T 14-10-2018 IPR023485 Phosphotyrosine protein phosphatase I PhaeoP54_01485 8290dac10622cdf438908f56a0827897 158 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 3 135 7.0E-19 T 14-10-2018 IPR023485 Phosphotyrosine protein phosphatase I PhaeoP54_01485 8290dac10622cdf438908f56a0827897 158 Gene3D G3DSA:3.40.50.2300 1 137 6.1E-36 T 14-10-2018 PhaeoP54_00314 5c97d08c791237f310e480834c7d4015 280 SUPERFAMILY SSF141868 33 274 1.14E-59 T 14-10-2018 IPR035919 EAL domain superfamily PhaeoP54_00314 5c97d08c791237f310e480834c7d4015 280 Gene3D G3DSA:3.20.20.450 27 276 3.0E-59 T 14-10-2018 IPR035919 EAL domain superfamily PhaeoP54_00314 5c97d08c791237f310e480834c7d4015 280 Pfam PF00563 EAL domain 33 263 1.2E-52 T 14-10-2018 IPR001633 EAL domain PhaeoP54_00314 5c97d08c791237f310e480834c7d4015 280 SMART SM00052 27 268 2.2E-26 T 14-10-2018 IPR001633 EAL domain PhaeoP54_00465 90767ff0e4b36d75c8b912dbe6d68863 388 SUPERFAMILY SSF51395 5 376 1.34E-103 T 14-10-2018 PhaeoP54_00465 90767ff0e4b36d75c8b912dbe6d68863 388 Gene3D G3DSA:3.20.20.70 3 382 2.8E-130 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PhaeoP54_00465 90767ff0e4b36d75c8b912dbe6d68863 388 PIRSF PIRSF000138 2 381 9.4E-123 T 14-10-2018 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent GO:0010181|GO:0016491|GO:0055114 Reactome: R-HSA-9033241 PhaeoP54_00465 90767ff0e4b36d75c8b912dbe6d68863 388 Pfam PF01070 FMN-dependent dehydrogenase 15 375 1.5E-131 T 14-10-2018 IPR000262 FMN-dependent dehydrogenase GO:0016491 Reactome: R-HSA-9033241 PhaeoP54_00465 90767ff0e4b36d75c8b912dbe6d68863 388 ProSitePatterns PS00557 FMN-dependent alpha-hydroxy acid dehydrogenases active site. 274 280 - T 14-10-2018 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site GO:0016491|GO:0055114 Reactome: R-HSA-9033241 PhaeoP54_02568 7ec6839599bd895d67ca2bb74d3cff30 227 Gene3D G3DSA:1.20.1050.10 85 195 1.6E-49 T 14-10-2018 PhaeoP54_02568 7ec6839599bd895d67ca2bb74d3cff30 227 Pfam PF13417 Glutathione S-transferase, N-terminal domain 12 82 1.2E-8 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 PhaeoP54_02568 7ec6839599bd895d67ca2bb74d3cff30 227 Gene3D G3DSA:3.40.30.10 5 201 1.6E-49 T 14-10-2018 PhaeoP54_02568 7ec6839599bd895d67ca2bb74d3cff30 227 SUPERFAMILY SSF52833 10 93 8.24E-16 T 14-10-2018 IPR036249 Thioredoxin-like superfamily PhaeoP54_02568 7ec6839599bd895d67ca2bb74d3cff30 227 SUPERFAMILY SSF47616 85 206 6.03E-11 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily PhaeoP54_03923 6ff2bd1d74b4719fcc625d0ef5870d3c 664 Pfam PF00593 TonB dependent receptor 214 662 2.3E-34 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel PhaeoP54_03923 6ff2bd1d74b4719fcc625d0ef5870d3c 664 Pfam PF07715 TonB-dependent Receptor Plug Domain 58 156 6.2E-11 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain PhaeoP54_03923 6ff2bd1d74b4719fcc625d0ef5870d3c 664 Gene3D G3DSA:2.170.130.10 52 162 8.0E-29 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily PhaeoP54_03923 6ff2bd1d74b4719fcc625d0ef5870d3c 664 SUPERFAMILY SSF56935 63 664 2.75E-70 T 14-10-2018 PhaeoP54_03923 6ff2bd1d74b4719fcc625d0ef5870d3c 664 Gene3D G3DSA:2.40.170.20 163 664 6.3E-77 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily PhaeoP54_00256 f766c8607e70ab8608226d8704d76ed8 265 Gene3D G3DSA:3.90.226.10 16 215 1.9E-54 T 14-10-2018 PhaeoP54_00256 f766c8607e70ab8608226d8704d76ed8 265 Gene3D G3DSA:3.40.1750.20 118 184 1.9E-54 T 14-10-2018 PhaeoP54_00256 f766c8607e70ab8608226d8704d76ed8 265 Pfam PF01343 Peptidase family S49 81 215 1.1E-29 T 14-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 PhaeoP54_00256 f766c8607e70ab8608226d8704d76ed8 265 SUPERFAMILY SSF52096 14 215 1.2E-33 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily PhaeoP54_00674 c68f4636aecb496f5aa7ab713f422ef3 785 SUPERFAMILY SSF51120 371 555 1.27E-22 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal PhaeoP54_00674 c68f4636aecb496f5aa7ab713f422ef3 785 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 266 284 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site PhaeoP54_00674 c68f4636aecb496f5aa7ab713f422ef3 785 SUPERFAMILY SSF51120 155 303 8.11E-15 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal PhaeoP54_00674 c68f4636aecb496f5aa7ab713f422ef3 785 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 468 486 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site PhaeoP54_00674 c68f4636aecb496f5aa7ab713f422ef3 785 Gene3D G3DSA:2.150.10.10 360 423 2.6E-12 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal PhaeoP54_00674 c68f4636aecb496f5aa7ab713f422ef3 785 Gene3D G3DSA:2.150.10.10 256 305 2.9E-11 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal PhaeoP54_00674 c68f4636aecb496f5aa7ab713f422ef3 785 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 392 410 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site PhaeoP54_00674 c68f4636aecb496f5aa7ab713f422ef3 785 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 459 477 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site PhaeoP54_00674 c68f4636aecb496f5aa7ab713f422ef3 785 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 360 376 0.12 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_00674 c68f4636aecb496f5aa7ab713f422ef3 785 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 481 497 0.11 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_00674 c68f4636aecb496f5aa7ab713f422ef3 785 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 234 249 1.3 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_00674 c68f4636aecb496f5aa7ab713f422ef3 785 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 498 514 4.9 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_00674 c68f4636aecb496f5aa7ab713f422ef3 785 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 251 268 0.002 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_00674 c68f4636aecb496f5aa7ab713f422ef3 785 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 463 479 2.7 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_00674 c68f4636aecb496f5aa7ab713f422ef3 785 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 444 461 0.084 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_00674 c68f4636aecb496f5aa7ab713f422ef3 785 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 378 394 0.02 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_00674 c68f4636aecb496f5aa7ab713f422ef3 785 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 342 357 0.043 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_00674 c68f4636aecb496f5aa7ab713f422ef3 785 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 396 410 0.07 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_00674 c68f4636aecb496f5aa7ab713f422ef3 785 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 324 340 0.0046 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_00674 c68f4636aecb496f5aa7ab713f422ef3 785 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 306 322 2.1 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_00674 c68f4636aecb496f5aa7ab713f422ef3 785 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 270 286 1.9 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_00674 c68f4636aecb496f5aa7ab713f422ef3 785 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 426 436 40.0 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_00674 c68f4636aecb496f5aa7ab713f422ef3 785 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 287 304 6.6E-4 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_00674 c68f4636aecb496f5aa7ab713f422ef3 785 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 217 232 1.1 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_00674 c68f4636aecb496f5aa7ab713f422ef3 785 SUPERFAMILY SSF51120 284 410 8.29E-23 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal PhaeoP54_00674 c68f4636aecb496f5aa7ab713f422ef3 785 Gene3D G3DSA:2.150.10.10 306 359 1.3E-9 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal PhaeoP54_00674 c68f4636aecb496f5aa7ab713f422ef3 785 Pfam PF13403 Hint domain 583 732 1.4E-49 T 14-10-2018 IPR028992 Hedgehog/Intein (Hint) domain PhaeoP54_00674 c68f4636aecb496f5aa7ab713f422ef3 785 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 486 504 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site PhaeoP54_00674 c68f4636aecb496f5aa7ab713f422ef3 785 SUPERFAMILY SSF51294 584 739 8.01E-20 T 14-10-2018 IPR036844 Hint domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 PhaeoP54_00674 c68f4636aecb496f5aa7ab713f422ef3 785 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 284 302 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site PhaeoP54_00674 c68f4636aecb496f5aa7ab713f422ef3 785 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 257 275 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site PhaeoP54_00674 c68f4636aecb496f5aa7ab713f422ef3 785 Gene3D G3DSA:2.170.16.10 582 708 3.4E-5 T 14-10-2018 PhaeoP54_00674 c68f4636aecb496f5aa7ab713f422ef3 785 Gene3D G3DSA:2.150.10.10 468 581 6.6E-14 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal PhaeoP54_00674 c68f4636aecb496f5aa7ab713f422ef3 785 PRINTS PR00313 NodO calcium binding signature 387 396 5.8E-11 T 14-10-2018 PhaeoP54_00674 c68f4636aecb496f5aa7ab713f422ef3 785 PRINTS PR00313 NodO calcium binding signature 297 305 5.8E-11 T 14-10-2018 PhaeoP54_00674 c68f4636aecb496f5aa7ab713f422ef3 785 PRINTS PR00313 NodO calcium binding signature 270 278 5.8E-11 T 14-10-2018 PhaeoP54_00674 c68f4636aecb496f5aa7ab713f422ef3 785 PRINTS PR00313 NodO calcium binding signature 249 260 5.8E-11 T 14-10-2018 PhaeoP54_00674 c68f4636aecb496f5aa7ab713f422ef3 785 Gene3D G3DSA:2.150.10.10 199 255 2.0E-5 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal PhaeoP54_01619 6d63736bf9a5c806a2d0f4542216407c 156 Pfam PF02600 Disulfide bond formation protein DsbB 3 146 3.7E-35 T 14-10-2018 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 PhaeoP54_01619 6d63736bf9a5c806a2d0f4542216407c 156 PIRSF PIRSF033913 2 155 2.7E-31 T 14-10-2018 IPR024199 Uncharacterised conserved protein, DsbB-like PhaeoP54_01619 6d63736bf9a5c806a2d0f4542216407c 156 SUPERFAMILY SSF158442 6 146 4.58E-39 T 14-10-2018 IPR023380 DsbB-like superfamily PhaeoP54_01619 6d63736bf9a5c806a2d0f4542216407c 156 Gene3D G3DSA:1.20.1550.10 1 156 7.9E-18 T 14-10-2018 IPR023380 DsbB-like superfamily PhaeoP54_00579 119489dd6ec7afb3a37014de8917c23c 200 Gene3D G3DSA:1.25.40.10 50 192 1.3E-20 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 PhaeoP54_00579 119489dd6ec7afb3a37014de8917c23c 200 SUPERFAMILY SSF48452 58 176 5.36E-21 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 PhaeoP54_00579 119489dd6ec7afb3a37014de8917c23c 200 SMART SM00028 123 156 0.17 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 PhaeoP54_00579 119489dd6ec7afb3a37014de8917c23c 200 SMART SM00028 89 122 0.017 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 PhaeoP54_00579 119489dd6ec7afb3a37014de8917c23c 200 Pfam PF13432 Tetratricopeptide repeat 95 149 6.9E-8 T 14-10-2018 PhaeoP54_03059 0c9f398cf863bc54313cca8459856b69 177 SMART SM00738 2 110 1.4E-32 T 14-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 PhaeoP54_03059 0c9f398cf863bc54313cca8459856b69 177 Pfam PF02357 Transcription termination factor nusG 3 107 1.9E-22 T 14-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 PhaeoP54_03059 0c9f398cf863bc54313cca8459856b69 177 Gene3D G3DSA:3.30.70.940 1 117 1.4E-38 T 14-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 PhaeoP54_03059 0c9f398cf863bc54313cca8459856b69 177 Gene3D G3DSA:2.30.30.30 118 175 7.2E-24 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 PhaeoP54_03059 0c9f398cf863bc54313cca8459856b69 177 SUPERFAMILY SSF50104 121 175 5.49E-18 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily PhaeoP54_03059 0c9f398cf863bc54313cca8459856b69 177 Pfam PF00467 KOW motif 125 160 8.2E-7 T 14-10-2018 IPR005824 KOW PhaeoP54_03059 0c9f398cf863bc54313cca8459856b69 177 PRINTS PR00338 Transcription termination factor NUSG signature 152 168 2.6E-18 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 PhaeoP54_03059 0c9f398cf863bc54313cca8459856b69 177 PRINTS PR00338 Transcription termination factor NUSG signature 57 69 2.6E-18 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 PhaeoP54_03059 0c9f398cf863bc54313cca8459856b69 177 PRINTS PR00338 Transcription termination factor NUSG signature 134 149 2.6E-18 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 PhaeoP54_03059 0c9f398cf863bc54313cca8459856b69 177 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 5 175 4.8E-63 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 PhaeoP54_03059 0c9f398cf863bc54313cca8459856b69 177 SUPERFAMILY SSF82679 3 113 1.83E-32 T 14-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 PhaeoP54_03059 0c9f398cf863bc54313cca8459856b69 177 ProSitePatterns PS01014 Transcription termination factor nusG signature. 159 168 - T 14-10-2018 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site PhaeoP54_03059 0c9f398cf863bc54313cca8459856b69 177 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 2 176 22.988 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 PhaeoP54_03059 0c9f398cf863bc54313cca8459856b69 177 SMART SM00739 122 149 0.0014 T 14-10-2018 IPR005824 KOW PhaeoP54_01424 139c9b67d5f15fa511b502919cc45fb7 447 SUPERFAMILY SSF51905 5 374 4.0E-25 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PhaeoP54_01424 139c9b67d5f15fa511b502919cc45fb7 447 Pfam PF01134 Glucose inhibited division protein A 5 374 1.1E-104 T 14-10-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 PhaeoP54_01424 139c9b67d5f15fa511b502919cc45fb7 447 Hamap MF_01037 Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO [trmFO]. 5 445 33.219 T 14-10-2018 IPR004417 Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO GO:0005737|GO:0008033|GO:0047151|GO:0050660 PhaeoP54_01424 139c9b67d5f15fa511b502919cc45fb7 447 Gene3D G3DSA:3.50.50.60 289 447 5.2E-45 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PhaeoP54_01424 139c9b67d5f15fa511b502919cc45fb7 447 Gene3D G3DSA:3.50.50.60 2 179 1.4E-45 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PhaeoP54_01424 139c9b67d5f15fa511b502919cc45fb7 447 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 344 367 - T 14-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 PhaeoP54_01424 139c9b67d5f15fa511b502919cc45fb7 447 TIGRFAM TIGR00137 gid_trmFO: tRNA:m(5)U-54 methyltransferase 4 443 8.5E-166 T 14-10-2018 IPR004417 Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO GO:0005737|GO:0008033|GO:0047151|GO:0050660 PhaeoP54_02139 7293c86823d82864857b77407b6e525d 117 SUPERFAMILY SSF52172 1 116 1.57E-24 T 14-10-2018 IPR011006 CheY-like superfamily PhaeoP54_02139 7293c86823d82864857b77407b6e525d 117 Pfam PF00072 Response regulator receiver domain 3 113 7.9E-16 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PhaeoP54_02139 7293c86823d82864857b77407b6e525d 117 Gene3D G3DSA:3.40.50.2300 1 117 2.4E-29 T 14-10-2018 PhaeoP54_02139 7293c86823d82864857b77407b6e525d 117 SMART SM00448 1 113 1.9E-15 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PhaeoP54_02642 5144b6ec411db9767fb66233cc9d92cc 258 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 150 178 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 PhaeoP54_02642 5144b6ec411db9767fb66233cc9d92cc 258 Gene3D G3DSA:3.40.50.720 2 258 7.7E-82 T 14-10-2018 PhaeoP54_02642 5144b6ec411db9767fb66233cc9d92cc 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 89 100 7.8E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_02642 5144b6ec411db9767fb66233cc9d92cc 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 143 151 7.8E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_02642 5144b6ec411db9767fb66233cc9d92cc 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 163 182 7.8E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_02642 5144b6ec411db9767fb66233cc9d92cc 258 SUPERFAMILY SSF51735 12 257 1.1E-82 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PhaeoP54_02642 5144b6ec411db9767fb66233cc9d92cc 258 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 20 256 1.4E-62 T 14-10-2018 PhaeoP54_02642 5144b6ec411db9767fb66233cc9d92cc 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 219 239 3.5E-39 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_02642 5144b6ec411db9767fb66233cc9d92cc 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 184 201 3.5E-39 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_02642 5144b6ec411db9767fb66233cc9d92cc 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 15 32 3.5E-39 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_02642 5144b6ec411db9767fb66233cc9d92cc 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 137 153 3.5E-39 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_02642 5144b6ec411db9767fb66233cc9d92cc 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 89 100 3.5E-39 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_02642 5144b6ec411db9767fb66233cc9d92cc 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 163 182 3.5E-39 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_02642 5144b6ec411db9767fb66233cc9d92cc 258 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 14 194 1.7E-4 T 14-10-2018 PhaeoP54_00845 93984c55ddcf6fcad619973f6ed9f7aa 86 Pfam PF04267 Sarcosine oxidase, delta subunit family 2 78 9.7E-29 T 14-10-2018 IPR006279 Sarcosine oxidase, delta subunit, heterotetrameric GO:0008115|GO:0046653 KEGG: 00260+1.5.3.1|MetaCyc: PWY-3661|MetaCyc: PWY-4722 PhaeoP54_00845 93984c55ddcf6fcad619973f6ed9f7aa 86 Gene3D G3DSA:3.30.2270.10 1 86 1.3E-27 T 14-10-2018 IPR038561 Sarcosine oxidase subunit delta superfamily KEGG: 00260+1.5.3.1|MetaCyc: PWY-3661|MetaCyc: PWY-4722 PhaeoP54_02705 76529848f89d88697375998566f5736a 323 Pfam PF00294 pfkB family carbohydrate kinase 2 317 1.0E-35 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB PhaeoP54_02705 76529848f89d88697375998566f5736a 323 SUPERFAMILY SSF53613 2 320 6.55E-55 T 14-10-2018 IPR029056 Ribokinase-like PhaeoP54_02705 76529848f89d88697375998566f5736a 323 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 258 271 - T 14-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 PhaeoP54_02705 76529848f89d88697375998566f5736a 323 Gene3D G3DSA:3.40.1190.20 1 321 7.2E-69 T 14-10-2018 IPR029056 Ribokinase-like PhaeoP54_00770 139c003963a2ec41dd629a3c2259cac4 255 TIGRFAM TIGR02434 CobF: precorrin-6A synthase (deacetylating) 4 254 7.7E-102 T 14-10-2018 IPR012797 Cobalamin (vitamin B12) biosynthesis CobF, precorrin-6A synthase GO:0009236|GO:0043819 KEGG: 00860+2.1.1.152|MetaCyc: PWY-7376 PhaeoP54_00770 139c003963a2ec41dd629a3c2259cac4 255 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 4 229 2.0E-34 T 14-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 PhaeoP54_00770 139c003963a2ec41dd629a3c2259cac4 255 Gene3D G3DSA:3.40.1010.10 1 146 2.4E-47 T 14-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 PhaeoP54_00770 139c003963a2ec41dd629a3c2259cac4 255 PIRSF PIRSF036525 1 255 2.7E-108 T 14-10-2018 IPR012797 Cobalamin (vitamin B12) biosynthesis CobF, precorrin-6A synthase GO:0009236|GO:0043819 KEGG: 00860+2.1.1.152|MetaCyc: PWY-7376 PhaeoP54_00770 139c003963a2ec41dd629a3c2259cac4 255 SUPERFAMILY SSF53790 4 253 3.01E-38 T 14-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 PhaeoP54_00770 139c003963a2ec41dd629a3c2259cac4 255 Gene3D G3DSA:3.30.950.10 147 255 1.1E-44 T 14-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 PhaeoP54_03137 f2bbcd901596bcc20404d79734261b8b 248 SUPERFAMILY SSF55729 68 214 2.13E-27 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase PhaeoP54_03137 f2bbcd901596bcc20404d79734261b8b 248 Pfam PF13302 Acetyltransferase (GNAT) domain 105 210 4.8E-19 T 14-10-2018 IPR000182 GNAT domain PhaeoP54_03137 f2bbcd901596bcc20404d79734261b8b 248 Gene3D G3DSA:3.40.630.30 46 225 9.8E-33 T 14-10-2018 PhaeoP54_03092 154be41175d4e926a2f32ef5a214eb7a 143 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 4 96 5.1E-18 T 14-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 PhaeoP54_03092 154be41175d4e926a2f32ef5a214eb7a 143 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 3 129 22.958 T 14-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 PhaeoP54_03092 154be41175d4e926a2f32ef5a214eb7a 143 Gene3D G3DSA:3.90.470.20 1 129 2.3E-32 T 14-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 PhaeoP54_03092 154be41175d4e926a2f32ef5a214eb7a 143 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 1 129 2.4E-20 T 14-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 PhaeoP54_03092 154be41175d4e926a2f32ef5a214eb7a 143 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 8 91 3.0E-40 T 14-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 PhaeoP54_03092 154be41175d4e926a2f32ef5a214eb7a 143 SUPERFAMILY SSF56214 1 128 2.22E-27 T 14-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 PhaeoP54_03092 154be41175d4e926a2f32ef5a214eb7a 143 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 1 129 2.9E-26 T 14-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 PhaeoP54_03852 0cd093c1501613a0266107bd38cf07b6 572 Gene3D G3DSA:3.40.50.720 297 511 1.7E-30 T 14-10-2018 PhaeoP54_03852 0cd093c1501613a0266107bd38cf07b6 572 Pfam PF14461 Prokaryotic E2 family B 49 128 6.7E-14 T 14-10-2018 IPR032701 Prokaryotic E2 family B PhaeoP54_03852 0cd093c1501613a0266107bd38cf07b6 572 SUPERFAMILY SSF54495 9 123 5.94E-8 T 14-10-2018 IPR016135 Ubiquitin-conjugating enzyme/RWD-like PhaeoP54_03852 0cd093c1501613a0266107bd38cf07b6 572 SUPERFAMILY SSF69572 297 448 1.24E-30 T 14-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 PhaeoP54_03852 0cd093c1501613a0266107bd38cf07b6 572 Pfam PF00899 ThiF family 297 442 1.1E-24 T 14-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 PhaeoP54_03786 5ed3e1099dc40a25dbf0603b23e52fe6 334 Gene3D G3DSA:3.40.50.180 142 334 1.4E-57 T 14-10-2018 IPR035909 Methylesterase CheB, C-terminal PhaeoP54_03786 5ed3e1099dc40a25dbf0603b23e52fe6 334 SUPERFAMILY SSF52738 149 332 1.7E-55 T 14-10-2018 IPR035909 Methylesterase CheB, C-terminal PhaeoP54_03786 5ed3e1099dc40a25dbf0603b23e52fe6 334 Pfam PF01339 CheB methylesterase 151 328 6.8E-47 T 14-10-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 PhaeoP54_01367 1cc33897671a1c8190cf3bd42b3341de 330 TIGRFAM TIGR02823 oxido_YhdH: putative quinone oxidoreductase, YhdH/YhfP family 4 328 8.8E-139 T 14-10-2018 IPR014188 Acrylyl-CoA reductase AcuI PhaeoP54_01367 1cc33897671a1c8190cf3bd42b3341de 330 Pfam PF00107 Zinc-binding dehydrogenase 161 271 2.1E-12 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 PhaeoP54_01367 1cc33897671a1c8190cf3bd42b3341de 330 SUPERFAMILY SSF50129 10 147 2.59E-42 T 14-10-2018 IPR011032 GroES-like superfamily PhaeoP54_01367 1cc33897671a1c8190cf3bd42b3341de 330 Gene3D G3DSA:3.40.50.720 128 296 2.5E-121 T 14-10-2018 PhaeoP54_01367 1cc33897671a1c8190cf3bd42b3341de 330 Gene3D G3DSA:3.90.180.10 19 326 2.5E-121 T 14-10-2018 PhaeoP54_01367 1cc33897671a1c8190cf3bd42b3341de 330 SMART SM00829 15 326 1.0E-4 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 PhaeoP54_01367 1cc33897671a1c8190cf3bd42b3341de 330 SUPERFAMILY SSF51735 118 293 1.21E-36 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PhaeoP54_01510 201547ae8cee51bfb09fba9e3abe239d 771 SMART SM00387 504 627 7.5E-32 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PhaeoP54_01510 201547ae8cee51bfb09fba9e3abe239d 771 Gene3D G3DSA:1.10.287.130 392 462 2.7E-22 T 14-10-2018 PhaeoP54_01510 201547ae8cee51bfb09fba9e3abe239d 771 Gene3D G3DSA:3.40.50.2300 657 771 4.2E-23 T 14-10-2018 PhaeoP54_01510 201547ae8cee51bfb09fba9e3abe239d 771 Gene3D G3DSA:3.30.450.20 268 391 1.9E-5 T 14-10-2018 PhaeoP54_01510 201547ae8cee51bfb09fba9e3abe239d 771 SUPERFAMILY SSF47384 391 460 7.65E-11 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 PhaeoP54_01510 201547ae8cee51bfb09fba9e3abe239d 771 PRINTS PR00344 Bacterial sensor protein C-terminal signature 587 605 1.8E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PhaeoP54_01510 201547ae8cee51bfb09fba9e3abe239d 771 PRINTS PR00344 Bacterial sensor protein C-terminal signature 556 570 1.8E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PhaeoP54_01510 201547ae8cee51bfb09fba9e3abe239d 771 PRINTS PR00344 Bacterial sensor protein C-terminal signature 611 624 1.8E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PhaeoP54_01510 201547ae8cee51bfb09fba9e3abe239d 771 PRINTS PR00344 Bacterial sensor protein C-terminal signature 574 584 1.8E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PhaeoP54_01510 201547ae8cee51bfb09fba9e3abe239d 771 Pfam PF00512 His Kinase A (phospho-acceptor) domain 399 461 1.4E-8 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PhaeoP54_01510 201547ae8cee51bfb09fba9e3abe239d 771 SUPERFAMILY SSF55785 287 388 1.47E-5 T 14-10-2018 IPR035965 PAS domain superfamily PhaeoP54_01510 201547ae8cee51bfb09fba9e3abe239d 771 Gene3D G3DSA:3.30.565.10 464 656 4.4E-45 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PhaeoP54_01510 201547ae8cee51bfb09fba9e3abe239d 771 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 505 625 1.5E-22 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PhaeoP54_01510 201547ae8cee51bfb09fba9e3abe239d 771 SMART SM00388 397 463 3.5E-9 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PhaeoP54_01510 201547ae8cee51bfb09fba9e3abe239d 771 SUPERFAMILY SSF55874 453 625 7.2E-41 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PhaeoP54_01510 201547ae8cee51bfb09fba9e3abe239d 771 SUPERFAMILY SSF52172 655 770 9.96E-25 T 14-10-2018 IPR011006 CheY-like superfamily PhaeoP54_01510 201547ae8cee51bfb09fba9e3abe239d 771 Pfam PF00072 Response regulator receiver domain 655 766 1.9E-15 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PhaeoP54_01510 201547ae8cee51bfb09fba9e3abe239d 771 SMART SM00448 653 766 4.3E-16 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PhaeoP54_00167 8e801635b873399c0d1edb0b63edb673 344 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 31 214 1.9E-23 T 14-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal PhaeoP54_00167 8e801635b873399c0d1edb0b63edb673 344 Gene3D G3DSA:1.10.10.60 243 344 5.5E-21 T 14-10-2018 PhaeoP54_00167 8e801635b873399c0d1edb0b63edb673 344 Pfam PF12833 Helix-turn-helix domain 266 342 1.1E-16 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PhaeoP54_00167 8e801635b873399c0d1edb0b63edb673 344 SUPERFAMILY SSF46689 296 342 1.25E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PhaeoP54_00167 8e801635b873399c0d1edb0b63edb673 344 SMART SM00342 260 342 5.2E-20 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PhaeoP54_01395 50fe8b918f46547acc550bd1c45d862e 695 Gene3D G3DSA:3.40.50.300 9 339 1.6E-87 T 14-10-2018 PhaeoP54_01395 50fe8b918f46547acc550bd1c45d862e 695 Gene3D G3DSA:3.40.50.300 353 688 4.2E-91 T 14-10-2018 PhaeoP54_01395 50fe8b918f46547acc550bd1c45d862e 695 ProSitePatterns PS00211 ABC transporters family signature. 510 524 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PhaeoP54_01395 50fe8b918f46547acc550bd1c45d862e 695 Pfam PF00005 ABC transporter 33 189 7.5E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PhaeoP54_01395 50fe8b918f46547acc550bd1c45d862e 695 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 587 678 2.2E-23 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 PhaeoP54_01395 50fe8b918f46547acc550bd1c45d862e 695 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 240 329 1.7E-18 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 PhaeoP54_01395 50fe8b918f46547acc550bd1c45d862e 695 SMART SM00382 40 239 1.5E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_01395 50fe8b918f46547acc550bd1c45d862e 695 SMART SM00382 393 587 7.5E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_01395 50fe8b918f46547acc550bd1c45d862e 695 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 241 305 9.7E-17 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 PhaeoP54_01395 50fe8b918f46547acc550bd1c45d862e 695 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 589 650 6.2E-14 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 PhaeoP54_01395 50fe8b918f46547acc550bd1c45d862e 695 Pfam PF00005 ABC transporter 386 537 2.4E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PhaeoP54_01395 50fe8b918f46547acc550bd1c45d862e 695 SUPERFAMILY SSF52540 394 652 1.42E-62 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_01395 50fe8b918f46547acc550bd1c45d862e 695 SUPERFAMILY SSF52540 11 261 2.15E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_01395 50fe8b918f46547acc550bd1c45d862e 695 ProSitePatterns PS00211 ABC transporters family signature. 162 176 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PhaeoP54_01440 4f56f7917d77ba19c5e7a624c73af4f4 205 Gene3D G3DSA:1.10.357.10 1 199 1.6E-46 T 14-10-2018 PhaeoP54_01440 4f56f7917d77ba19c5e7a624c73af4f4 205 SUPERFAMILY SSF48498 83 198 1.01E-20 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily PhaeoP54_01440 4f56f7917d77ba19c5e7a624c73af4f4 205 Pfam PF13305 WHG domain 89 172 6.2E-11 T 14-10-2018 IPR025996 WHG domain PhaeoP54_01440 4f56f7917d77ba19c5e7a624c73af4f4 205 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 36 59 6.1E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PhaeoP54_01440 4f56f7917d77ba19c5e7a624c73af4f4 205 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 15 28 6.1E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PhaeoP54_01440 4f56f7917d77ba19c5e7a624c73af4f4 205 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 61 1.9E-12 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PhaeoP54_01440 4f56f7917d77ba19c5e7a624c73af4f4 205 SUPERFAMILY SSF46689 3 78 2.08E-16 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PhaeoP54_00596 273f1f504750b3eb1b3af08dfea4e0a6 279 TIGRFAM TIGR02866 CoxB: cytochrome c oxidase, subunit II 42 261 1.4E-59 T 14-10-2018 IPR014222 Cytochrome c oxidase, subunit II GO:0016021|GO:0016491 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PhaeoP54_00596 273f1f504750b3eb1b3af08dfea4e0a6 279 Gene3D G3DSA:2.60.40.420 126 263 3.2E-53 T 14-10-2018 IPR008972 Cupredoxin PhaeoP54_00596 273f1f504750b3eb1b3af08dfea4e0a6 279 ProSitePatterns PS00078 CO II and nitrous oxide reductase dinuclear copper centers signature. 196 244 - T 14-10-2018 IPR001505 Copper centre Cu(A) GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PhaeoP54_00596 273f1f504750b3eb1b3af08dfea4e0a6 279 SUPERFAMILY SSF49503 125 263 6.86E-54 T 14-10-2018 IPR008972 Cupredoxin PhaeoP54_00596 273f1f504750b3eb1b3af08dfea4e0a6 279 SUPERFAMILY SSF81464 27 124 2.45E-25 T 14-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PhaeoP54_00596 273f1f504750b3eb1b3af08dfea4e0a6 279 Gene3D G3DSA:1.10.287.90 30 125 5.1E-34 T 14-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PhaeoP54_00596 273f1f504750b3eb1b3af08dfea4e0a6 279 Pfam PF02790 Cytochrome C oxidase subunit II, transmembrane domain 32 115 3.1E-23 T 14-10-2018 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PhaeoP54_00596 273f1f504750b3eb1b3af08dfea4e0a6 279 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 129 251 4.3E-47 T 14-10-2018 IPR002429 Cytochrome c oxidase subunit II-like C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PhaeoP54_00596 273f1f504750b3eb1b3af08dfea4e0a6 279 PRINTS PR01166 Cytochrome c oxidase subunit II signature 215 232 3.4E-40 T 14-10-2018 PhaeoP54_00596 273f1f504750b3eb1b3af08dfea4e0a6 279 PRINTS PR01166 Cytochrome c oxidase subunit II signature 233 250 3.4E-40 T 14-10-2018 PhaeoP54_00596 273f1f504750b3eb1b3af08dfea4e0a6 279 PRINTS PR01166 Cytochrome c oxidase subunit II signature 195 215 3.4E-40 T 14-10-2018 PhaeoP54_00596 273f1f504750b3eb1b3af08dfea4e0a6 279 PRINTS PR01166 Cytochrome c oxidase subunit II signature 91 103 3.4E-40 T 14-10-2018 PhaeoP54_00596 273f1f504750b3eb1b3af08dfea4e0a6 279 PRINTS PR01166 Cytochrome c oxidase subunit II signature 171 192 3.4E-40 T 14-10-2018 PhaeoP54_00596 273f1f504750b3eb1b3af08dfea4e0a6 279 PRINTS PR01166 Cytochrome c oxidase subunit II signature 125 144 3.4E-40 T 14-10-2018 PhaeoP54_00596 273f1f504750b3eb1b3af08dfea4e0a6 279 PRINTS PR01166 Cytochrome c oxidase subunit II signature 103 123 3.4E-40 T 14-10-2018 PhaeoP54_00252 dd615575640d50727aff2078fed8008e 393 TIGRFAM TIGR02360 pbenz_hydroxyl: 4-hydroxybenzoate 3-monooxygenase 6 393 6.4E-205 T 14-10-2018 IPR012733 4-hydroxybenzoate 3-monooxygenase GO:0018659|GO:0043639|GO:0050660|GO:0055114 PhaeoP54_00252 dd615575640d50727aff2078fed8008e 393 Gene3D G3DSA:3.30.9.10 76 390 1.4E-163 T 14-10-2018 PhaeoP54_00252 dd615575640d50727aff2078fed8008e 393 Gene3D G3DSA:3.50.50.60 6 354 1.4E-163 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PhaeoP54_00252 dd615575640d50727aff2078fed8008e 393 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 154 169 8.8E-28 T 14-10-2018 PhaeoP54_00252 dd615575640d50727aff2078fed8008e 393 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 296 312 8.8E-28 T 14-10-2018 PhaeoP54_00252 dd615575640d50727aff2078fed8008e 393 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 281 296 8.8E-28 T 14-10-2018 PhaeoP54_00252 dd615575640d50727aff2078fed8008e 393 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 7 29 8.8E-28 T 14-10-2018 PhaeoP54_00252 dd615575640d50727aff2078fed8008e 393 SUPERFAMILY SSF54373 178 278 6.67E-44 T 14-10-2018 PhaeoP54_00252 dd615575640d50727aff2078fed8008e 393 Pfam PF01494 FAD binding domain 6 346 1.4E-84 T 14-10-2018 IPR002938 FAD-binding domain GO:0071949 PhaeoP54_00252 dd615575640d50727aff2078fed8008e 393 SUPERFAMILY SSF51905 6 392 1.75E-54 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PhaeoP54_00228 1dbbe44969070b5dbaa3eed99aef71d7 284 SUPERFAMILY SSF46785 2 96 6.18E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_00228 1dbbe44969070b5dbaa3eed99aef71d7 284 Gene3D G3DSA:1.10.10.10 1 72 2.0E-14 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_00228 1dbbe44969070b5dbaa3eed99aef71d7 284 Pfam PF03466 LysR substrate binding domain 74 283 2.8E-34 T 14-10-2018 IPR005119 LysR, substrate-binding PhaeoP54_00228 1dbbe44969070b5dbaa3eed99aef71d7 284 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 2 47 6.2E-14 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PhaeoP54_00228 1dbbe44969070b5dbaa3eed99aef71d7 284 Gene3D G3DSA:3.40.190.10 151 255 8.7E-40 T 14-10-2018 PhaeoP54_00228 1dbbe44969070b5dbaa3eed99aef71d7 284 SUPERFAMILY SSF53850 77 283 1.93E-34 T 14-10-2018 PhaeoP54_00228 1dbbe44969070b5dbaa3eed99aef71d7 284 Gene3D G3DSA:3.40.190.10 78 273 8.7E-40 T 14-10-2018 PhaeoP54_00228 1dbbe44969070b5dbaa3eed99aef71d7 284 TIGRFAM TIGR02424 TF_pcaQ: pca operon transcription factor PcaQ 1 283 2.6E-111 T 14-10-2018 IPR012787 Pca transcription factor PcaQ GO:0003677|GO:0019619|GO:0045893 PhaeoP54_02345 8b0c7b3fd511ad2f9026e8878b691b7b 1014 Gene3D G3DSA:3.30.70.1430 550 648 5.4E-232 T 14-10-2018 PhaeoP54_02345 8b0c7b3fd511ad2f9026e8878b691b7b 1014 Gene3D G3DSA:1.20.1640.10 10 502 5.4E-232 T 14-10-2018 PhaeoP54_02345 8b0c7b3fd511ad2f9026e8878b691b7b 1014 SUPERFAMILY SSF82693 136 321 1.5E-17 T 14-10-2018 PhaeoP54_02345 8b0c7b3fd511ad2f9026e8878b691b7b 1014 Gene3D G3DSA:3.30.2090.10 179 269 5.4E-232 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PhaeoP54_02345 8b0c7b3fd511ad2f9026e8878b691b7b 1014 SUPERFAMILY SSF82866 784 1006 2.09E-43 T 14-10-2018 PhaeoP54_02345 8b0c7b3fd511ad2f9026e8878b691b7b 1014 SUPERFAMILY SSF82693 551 598 2.2E-5 T 14-10-2018 PhaeoP54_02345 8b0c7b3fd511ad2f9026e8878b691b7b 1014 Pfam PF00873 AcrB/AcrD/AcrF family 5 1001 1.6E-155 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PhaeoP54_02345 8b0c7b3fd511ad2f9026e8878b691b7b 1014 Gene3D G3DSA:1.20.1640.10 503 998 5.4E-232 T 14-10-2018 PhaeoP54_02345 8b0c7b3fd511ad2f9026e8878b691b7b 1014 SUPERFAMILY SSF82866 292 490 2.62E-36 T 14-10-2018 PhaeoP54_02345 8b0c7b3fd511ad2f9026e8878b691b7b 1014 Gene3D G3DSA:3.30.70.1440 649 846 5.4E-232 T 14-10-2018 PhaeoP54_02345 8b0c7b3fd511ad2f9026e8878b691b7b 1014 SUPERFAMILY SSF82693 40 134 5.62E-18 T 14-10-2018 PhaeoP54_02345 8b0c7b3fd511ad2f9026e8878b691b7b 1014 Gene3D G3DSA:3.30.2090.10 701 788 5.4E-232 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PhaeoP54_02345 8b0c7b3fd511ad2f9026e8878b691b7b 1014 Gene3D G3DSA:3.30.70.1430 40 796 5.4E-232 T 14-10-2018 PhaeoP54_02345 8b0c7b3fd511ad2f9026e8878b691b7b 1014 PRINTS PR00702 Acriflavin resistance protein family signature 462 485 4.7E-23 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PhaeoP54_02345 8b0c7b3fd511ad2f9026e8878b691b7b 1014 PRINTS PR00702 Acriflavin resistance protein family signature 384 408 4.7E-23 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PhaeoP54_02345 8b0c7b3fd511ad2f9026e8878b691b7b 1014 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 4.7E-23 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PhaeoP54_02345 8b0c7b3fd511ad2f9026e8878b691b7b 1014 PRINTS PR00702 Acriflavin resistance protein family signature 356 377 4.7E-23 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PhaeoP54_02345 8b0c7b3fd511ad2f9026e8878b691b7b 1014 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 4.7E-23 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PhaeoP54_02345 8b0c7b3fd511ad2f9026e8878b691b7b 1014 Gene3D G3DSA:3.30.70.1320 135 326 5.4E-232 T 14-10-2018 PhaeoP54_03014 c3c41f02e26be10f2e8486e6bdd97b4e 188 SUPERFAMILY SSF54768 16 85 1.36E-22 T 14-10-2018 PhaeoP54_03014 c3c41f02e26be10f2e8486e6bdd97b4e 188 Pfam PF03719 Ribosomal protein S5, C-terminal domain 96 167 2.0E-29 T 14-10-2018 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 PhaeoP54_03014 c3c41f02e26be10f2e8486e6bdd97b4e 188 ProSitePatterns PS00585 Ribosomal protein S5 signature. 37 69 - T 14-10-2018 IPR018192 Ribosomal protein S5, N-terminal, conserved site PhaeoP54_03014 c3c41f02e26be10f2e8486e6bdd97b4e 188 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 173 35.425 T 14-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 PhaeoP54_03014 c3c41f02e26be10f2e8486e6bdd97b4e 188 Gene3D G3DSA:3.30.160.20 12 82 5.9E-31 T 14-10-2018 PhaeoP54_03014 c3c41f02e26be10f2e8486e6bdd97b4e 188 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 19 172 4.6E-66 T 14-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 PhaeoP54_03014 c3c41f02e26be10f2e8486e6bdd97b4e 188 SUPERFAMILY SSF54211 89 169 1.09E-25 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold PhaeoP54_03014 c3c41f02e26be10f2e8486e6bdd97b4e 188 Gene3D G3DSA:3.30.230.10 83 177 1.0E-34 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PhaeoP54_03014 c3c41f02e26be10f2e8486e6bdd97b4e 188 Pfam PF00333 Ribosomal protein S5, N-terminal domain 20 84 2.3E-28 T 14-10-2018 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 PhaeoP54_02976 c66ee9210e1bd0ddc47abb6478211049 473 SUPERFAMILY SSF55424 337 453 3.09E-30 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 PhaeoP54_02976 c66ee9210e1bd0ddc47abb6478211049 473 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 40 50 - T 14-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 PhaeoP54_02976 c66ee9210e1bd0ddc47abb6478211049 473 PIRSF PIRSF000350 1 452 5.0E-97 T 14-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 PhaeoP54_02976 c66ee9210e1bd0ddc47abb6478211049 473 Gene3D G3DSA:3.30.390.30 338 453 1.8E-31 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 PhaeoP54_02976 c66ee9210e1bd0ddc47abb6478211049 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 335 356 2.2E-57 T 14-10-2018 PhaeoP54_02976 c66ee9210e1bd0ddc47abb6478211049 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 257 271 2.2E-57 T 14-10-2018 PhaeoP54_02976 c66ee9210e1bd0ddc47abb6478211049 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 421 441 2.2E-57 T 14-10-2018 PhaeoP54_02976 c66ee9210e1bd0ddc47abb6478211049 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 299 306 2.2E-57 T 14-10-2018 PhaeoP54_02976 c66ee9210e1bd0ddc47abb6478211049 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 39 54 2.2E-57 T 14-10-2018 PhaeoP54_02976 c66ee9210e1bd0ddc47abb6478211049 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 2.2E-57 T 14-10-2018 PhaeoP54_02976 c66ee9210e1bd0ddc47abb6478211049 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 399 414 2.2E-57 T 14-10-2018 PhaeoP54_02976 c66ee9210e1bd0ddc47abb6478211049 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 136 145 2.2E-57 T 14-10-2018 PhaeoP54_02976 c66ee9210e1bd0ddc47abb6478211049 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 172 197 2.2E-57 T 14-10-2018 PhaeoP54_02976 c66ee9210e1bd0ddc47abb6478211049 473 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 319 2.7E-58 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PhaeoP54_02976 c66ee9210e1bd0ddc47abb6478211049 473 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 256 272 5.2E-26 T 14-10-2018 PhaeoP54_02976 c66ee9210e1bd0ddc47abb6478211049 473 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 5.2E-26 T 14-10-2018 PhaeoP54_02976 c66ee9210e1bd0ddc47abb6478211049 473 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 133 151 5.2E-26 T 14-10-2018 PhaeoP54_02976 c66ee9210e1bd0ddc47abb6478211049 473 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 172 190 5.2E-26 T 14-10-2018 PhaeoP54_02976 c66ee9210e1bd0ddc47abb6478211049 473 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 284 306 5.2E-26 T 14-10-2018 PhaeoP54_02976 c66ee9210e1bd0ddc47abb6478211049 473 SUPERFAMILY SSF51905 1 359 1.07E-52 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PhaeoP54_02976 c66ee9210e1bd0ddc47abb6478211049 473 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 339 444 8.8E-24 T 14-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 PhaeoP54_02976 c66ee9210e1bd0ddc47abb6478211049 473 Gene3D G3DSA:3.50.50.60 145 263 3.3E-97 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PhaeoP54_02976 c66ee9210e1bd0ddc47abb6478211049 473 Gene3D G3DSA:3.50.50.60 7 319 3.3E-97 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PhaeoP54_02871 8e6eb8c11da83ca91cac7fce48219591 453 SUPERFAMILY SSF50182 274 339 5.89E-14 T 14-10-2018 IPR010920 LSM domain superfamily PhaeoP54_02871 8e6eb8c11da83ca91cac7fce48219591 453 SUPERFAMILY SSF82689 342 444 4.97E-25 T 14-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 PhaeoP54_02871 8e6eb8c11da83ca91cac7fce48219591 453 Pfam PF00924 Mechanosensitive ion channel 231 433 8.8E-40 T 14-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 PhaeoP54_02871 8e6eb8c11da83ca91cac7fce48219591 453 Gene3D G3DSA:3.30.70.100 341 437 3.0E-17 T 14-10-2018 PhaeoP54_02871 8e6eb8c11da83ca91cac7fce48219591 453 Gene3D G3DSA:2.30.30.60 290 338 3.3E-6 T 14-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily PhaeoP54_02871 8e6eb8c11da83ca91cac7fce48219591 453 SUPERFAMILY SSF82861 190 272 5.62E-11 T 14-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 PhaeoP54_01646 e1826cc3545ac11ba7d196d95ff889cc 162 SUPERFAMILY SSF46785 6 96 1.31E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_01646 e1826cc3545ac11ba7d196d95ff889cc 162 Pfam PF13412 Winged helix-turn-helix DNA-binding 7 54 2.0E-17 T 14-10-2018 PhaeoP54_01646 e1826cc3545ac11ba7d196d95ff889cc 162 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 7 23 3.3E-12 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 PhaeoP54_01646 e1826cc3545ac11ba7d196d95ff889cc 162 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 23 34 3.3E-12 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 PhaeoP54_01646 e1826cc3545ac11ba7d196d95ff889cc 162 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 34 53 3.3E-12 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 PhaeoP54_01646 e1826cc3545ac11ba7d196d95ff889cc 162 Gene3D G3DSA:3.30.70.920 60 144 5.3E-26 T 14-10-2018 PhaeoP54_01646 e1826cc3545ac11ba7d196d95ff889cc 162 SUPERFAMILY SSF54909 67 154 2.01E-21 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel PhaeoP54_01646 e1826cc3545ac11ba7d196d95ff889cc 162 Pfam PF01037 Lrp/AsnC ligand binding domain 73 144 4.2E-22 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain PhaeoP54_01646 e1826cc3545ac11ba7d196d95ff889cc 162 Gene3D G3DSA:1.10.10.10 8 58 4.7E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_01646 e1826cc3545ac11ba7d196d95ff889cc 162 SMART SM00344 7 116 4.6E-37 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 PhaeoP54_02262 795dad3c1565ef273a5e4c84d29272f1 318 SUPERFAMILY SSF46689 209 259 2.44E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PhaeoP54_02262 795dad3c1565ef273a5e4c84d29272f1 318 SUPERFAMILY SSF46689 261 311 8.96E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PhaeoP54_02262 795dad3c1565ef273a5e4c84d29272f1 318 SUPERFAMILY SSF51182 24 88 6.81E-7 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily PhaeoP54_02262 795dad3c1565ef273a5e4c84d29272f1 318 SMART SM00342 225 308 2.9E-30 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PhaeoP54_02262 795dad3c1565ef273a5e4c84d29272f1 318 Gene3D G3DSA:1.10.10.60 205 317 5.9E-29 T 14-10-2018 PhaeoP54_02262 795dad3c1565ef273a5e4c84d29272f1 318 Pfam PF12833 Helix-turn-helix domain 231 309 1.5E-22 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PhaeoP54_02262 795dad3c1565ef273a5e4c84d29272f1 318 Pfam PF12852 Cupin 3 193 9.6E-43 T 14-10-2018 IPR032783 AraC-type transcription regulator, ligand-binding domain PhaeoP54_02262 795dad3c1565ef273a5e4c84d29272f1 318 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 277 292 3.1E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PhaeoP54_02262 795dad3c1565ef273a5e4c84d29272f1 318 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 292 308 3.1E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PhaeoP54_02400 0009fde5870633a8b556428b95c258cf 773 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 221 333 3.0E-12 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 PhaeoP54_02400 0009fde5870633a8b556428b95c258cf 773 TIGRFAM TIGR02639 ClpA: ATP-dependent Clp protease ATP-binding subunit ClpA 5 744 0.0 T 14-10-2018 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA GO:0016887|GO:0043335 PhaeoP54_02400 0009fde5870633a8b556428b95c258cf 773 Gene3D G3DSA:3.40.50.300 168 360 1.7E-64 T 14-10-2018 PhaeoP54_02400 0009fde5870633a8b556428b95c258cf 773 Gene3D G3DSA:3.40.50.300 449 661 6.0E-79 T 14-10-2018 PhaeoP54_02400 0009fde5870633a8b556428b95c258cf 773 Gene3D G3DSA:1.10.1780.10 4 145 1.4E-37 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 PhaeoP54_02400 0009fde5870633a8b556428b95c258cf 773 SMART SM01086 663 752 1.1E-31 T 14-10-2018 IPR019489 Clp ATPase, C-terminal PhaeoP54_02400 0009fde5870633a8b556428b95c258cf 773 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 528 546 - T 14-10-2018 IPR028299 ClpA/B, conserved site 2 PhaeoP54_02400 0009fde5870633a8b556428b95c258cf 773 SUPERFAMILY SSF52540 178 434 3.41E-68 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_02400 0009fde5870633a8b556428b95c258cf 773 SUPERFAMILY SSF52540 447 741 1.78E-76 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_02400 0009fde5870633a8b556428b95c258cf 773 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 543 561 1.1E-37 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 PhaeoP54_02400 0009fde5870633a8b556428b95c258cf 773 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 572 590 1.1E-37 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 PhaeoP54_02400 0009fde5870633a8b556428b95c258cf 773 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 605 619 1.1E-37 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 PhaeoP54_02400 0009fde5870633a8b556428b95c258cf 773 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 501 519 1.1E-37 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 PhaeoP54_02400 0009fde5870633a8b556428b95c258cf 773 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 663 743 1.8E-23 T 14-10-2018 IPR019489 Clp ATPase, C-terminal PhaeoP54_02400 0009fde5870633a8b556428b95c258cf 773 SMART SM00382 216 361 2.8E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_02400 0009fde5870633a8b556428b95c258cf 773 SMART SM00382 497 660 2.2E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_02400 0009fde5870633a8b556428b95c258cf 773 SUPERFAMILY SSF81923 4 144 4.45E-55 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 PhaeoP54_02400 0009fde5870633a8b556428b95c258cf 773 Gene3D G3DSA:1.10.8.60 361 448 1.0E-31 T 14-10-2018 PhaeoP54_02400 0009fde5870633a8b556428b95c258cf 773 Gene3D G3DSA:1.10.8.60 663 762 4.0E-28 T 14-10-2018 PhaeoP54_02400 0009fde5870633a8b556428b95c258cf 773 Pfam PF07724 AAA domain (Cdc48 subfamily) 496 656 3.7E-48 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 PhaeoP54_02400 0009fde5870633a8b556428b95c258cf 773 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 15 63 1.5E-11 T 14-10-2018 IPR004176 Clp, N-terminal PhaeoP54_02400 0009fde5870633a8b556428b95c258cf 773 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 312 324 - T 14-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 PhaeoP54_03071 05cd53449fa4f4f099fb334e5840d111 252 SUPERFAMILY SSF52402 1 246 2.79E-89 T 14-10-2018 PhaeoP54_03071 05cd53449fa4f4f099fb334e5840d111 252 Pfam PF01012 Electron transfer flavoprotein domain 29 210 9.5E-47 T 14-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 PhaeoP54_03071 05cd53449fa4f4f099fb334e5840d111 252 PIRSF PIRSF000090 1 252 1.0E-85 T 14-10-2018 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 PhaeoP54_03071 05cd53449fa4f4f099fb334e5840d111 252 Gene3D G3DSA:3.40.50.620 1 252 1.9E-90 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PhaeoP54_03071 05cd53449fa4f4f099fb334e5840d111 252 ProSitePatterns PS01065 Electron transfer flavoprotein beta-subunit signature. 159 179 - T 14-10-2018 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 PhaeoP54_03071 05cd53449fa4f4f099fb334e5840d111 252 SMART SM00893 23 215 5.2E-69 T 14-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 PhaeoP54_01192 45647d9bfea01a3c7abd4d3631df7598 188 SUPERFAMILY SSF54637 18 166 2.77E-19 T 14-10-2018 IPR029069 HotDog domain superfamily PhaeoP54_01192 45647d9bfea01a3c7abd4d3631df7598 188 Pfam PF13622 Thioesterase-like superfamily 62 178 1.4E-7 T 14-10-2018 PhaeoP54_01192 45647d9bfea01a3c7abd4d3631df7598 188 Gene3D G3DSA:3.10.129.10 8 173 2.2E-52 T 14-10-2018 PhaeoP54_02535 81c1c74b4fee86a27fc3e01f5da872ce 68 Pfam PF00313 'Cold-shock' DNA-binding domain 3 66 5.4E-23 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 PhaeoP54_02535 81c1c74b4fee86a27fc3e01f5da872ce 68 PRINTS PR00050 Cold shock protein signature 25 34 7.9E-13 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 PhaeoP54_02535 81c1c74b4fee86a27fc3e01f5da872ce 68 PRINTS PR00050 Cold shock protein signature 40 58 7.9E-13 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 PhaeoP54_02535 81c1c74b4fee86a27fc3e01f5da872ce 68 PRINTS PR00050 Cold shock protein signature 4 19 7.9E-13 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 PhaeoP54_02535 81c1c74b4fee86a27fc3e01f5da872ce 68 Gene3D G3DSA:2.40.50.140 1 65 4.5E-25 T 14-10-2018 PhaeoP54_02535 81c1c74b4fee86a27fc3e01f5da872ce 68 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 14-10-2018 IPR019844 Cold-shock conserved site PhaeoP54_02535 81c1c74b4fee86a27fc3e01f5da872ce 68 PIRSF PIRSF002599 1 68 1.7E-21 T 14-10-2018 IPR012156 Cold shock, CspA GO:0003676 PhaeoP54_02535 81c1c74b4fee86a27fc3e01f5da872ce 68 SMART SM00357 3 68 7.6E-23 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 PhaeoP54_02535 81c1c74b4fee86a27fc3e01f5da872ce 68 SUPERFAMILY SSF50249 1 66 7.07E-22 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold PhaeoP54_00763 8d521d6b03a77f949248aa03efc90645 265 SMART SM00849 37 212 0.0035 T 14-10-2018 IPR001279 Metallo-beta-lactamase PhaeoP54_00763 8d521d6b03a77f949248aa03efc90645 265 SUPERFAMILY SSF56281 5 262 5.11E-45 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like PhaeoP54_00763 8d521d6b03a77f949248aa03efc90645 265 Gene3D G3DSA:3.60.15.10 2 263 3.2E-71 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like PhaeoP54_00763 8d521d6b03a77f949248aa03efc90645 265 Pfam PF12706 Beta-lactamase superfamily domain 52 233 4.8E-35 T 14-10-2018 IPR001279 Metallo-beta-lactamase PhaeoP54_00655 e5abc18ff28c28316a2f5b850e59680a 70 Pfam PF13333 Integrase core domain 14 66 3.0E-10 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 PhaeoP54_00655 e5abc18ff28c28316a2f5b850e59680a 70 SUPERFAMILY SSF53098 1 65 1.29E-10 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily PhaeoP54_00896 54e6b22a77a8453b95e0ecba040087e2 128 Pfam PF09917 Uncharacterized protein conserved in bacteria (DUF2147) 25 126 1.6E-17 T 14-10-2018 IPR019223 Domain of unknown function DUF2147 PhaeoP54_00896 54e6b22a77a8453b95e0ecba040087e2 128 Gene3D G3DSA:2.40.128.520 59 128 7.7E-6 T 14-10-2018 PhaeoP54_03704 a113f318cf081fea8419c987ceb9375d 385 Gene3D G3DSA:2.40.50.100 289 373 3.1E-11 T 14-10-2018 PhaeoP54_03704 a113f318cf081fea8419c987ceb9375d 385 SUPERFAMILY SSF52540 4 260 2.99E-76 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_03704 a113f318cf081fea8419c987ceb9375d 385 SUPERFAMILY SSF50331 254 373 2.41E-19 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal PhaeoP54_03704 a113f318cf081fea8419c987ceb9375d 385 ProSitePatterns PS00211 ABC transporters family signature. 152 166 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PhaeoP54_03704 a113f318cf081fea8419c987ceb9375d 385 Gene3D G3DSA:3.40.50.300 1 256 1.1E-68 T 14-10-2018 PhaeoP54_03704 a113f318cf081fea8419c987ceb9375d 385 Pfam PF00005 ABC transporter 19 179 1.6E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PhaeoP54_03704 a113f318cf081fea8419c987ceb9375d 385 SMART SM00382 28 231 8.8E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_03704 a113f318cf081fea8419c987ceb9375d 385 Gene3D G3DSA:2.40.50.140 298 356 3.1E-11 T 14-10-2018 PhaeoP54_03704 a113f318cf081fea8419c987ceb9375d 385 Pfam PF08402 TOBE domain 291 364 5.8E-13 T 14-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 PhaeoP54_01386 50b3bc556dd5171b99b6a23b473831db 337 Pfam PF00589 Phage integrase family 124 304 5.0E-41 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 PhaeoP54_01386 50b3bc556dd5171b99b6a23b473831db 337 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 22 101 7.9E-15 T 14-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 PhaeoP54_01386 50b3bc556dd5171b99b6a23b473831db 337 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 17 318 49.184 T 14-10-2018 IPR023009 Tyrosine recombinase XerC/XerD PhaeoP54_01386 50b3bc556dd5171b99b6a23b473831db 337 SUPERFAMILY SSF56349 19 310 6.47E-54 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 PhaeoP54_01386 50b3bc556dd5171b99b6a23b473831db 337 Gene3D G3DSA:1.10.150.130 14 109 7.0E-19 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal PhaeoP54_01386 50b3bc556dd5171b99b6a23b473831db 337 Gene3D G3DSA:1.10.443.10 122 311 6.9E-53 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 PhaeoP54_03608 92fb7250265fc0c8f543774f33c77365 157 SUPERFAMILY SSF54909 66 155 1.34E-15 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel PhaeoP54_03608 92fb7250265fc0c8f543774f33c77365 157 SUPERFAMILY SSF46785 7 85 1.22E-13 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_03608 92fb7250265fc0c8f543774f33c77365 157 Pfam PF13412 Winged helix-turn-helix DNA-binding 7 52 1.1E-12 T 14-10-2018 PhaeoP54_03608 92fb7250265fc0c8f543774f33c77365 157 Gene3D G3DSA:3.30.70.920 58 152 2.4E-18 T 14-10-2018 PhaeoP54_03608 92fb7250265fc0c8f543774f33c77365 157 Gene3D G3DSA:1.10.10.10 6 57 2.3E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_03608 92fb7250265fc0c8f543774f33c77365 157 Pfam PF01037 Lrp/AsnC ligand binding domain 72 146 4.0E-15 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain PhaeoP54_03608 92fb7250265fc0c8f543774f33c77365 157 SMART SM00344 6 115 1.3E-29 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 PhaeoP54_03608 92fb7250265fc0c8f543774f33c77365 157 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 33 52 8.2E-13 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 PhaeoP54_03608 92fb7250265fc0c8f543774f33c77365 157 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 6 22 8.2E-13 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 PhaeoP54_03608 92fb7250265fc0c8f543774f33c77365 157 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 22 33 8.2E-13 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 PhaeoP54_01821 cb1cce932d55af1705be8e379743ca0f 179 Pfam PF08534 Redoxin 39 162 1.1E-12 T 14-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 PhaeoP54_01821 cb1cce932d55af1705be8e379743ca0f 179 TIGRFAM TIGR00385 dsbE: periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily 9 174 5.3E-54 T 14-10-2018 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE GO:0015036|GO:0017004|GO:0030288 PhaeoP54_01821 cb1cce932d55af1705be8e379743ca0f 179 SUPERFAMILY SSF52833 46 175 2.27E-33 T 14-10-2018 IPR036249 Thioredoxin-like superfamily PhaeoP54_01821 cb1cce932d55af1705be8e379743ca0f 179 ProSitePatterns PS00194 Thioredoxin family active site. 69 87 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 PhaeoP54_01821 cb1cce932d55af1705be8e379743ca0f 179 Gene3D G3DSA:3.40.30.10 21 179 9.9E-37 T 14-10-2018 PhaeoP54_01264 3b1c55ce02db47823f60a5fbcfb3356e 416 Gene3D G3DSA:3.40.630.10 22 406 1.3E-141 T 14-10-2018 PhaeoP54_01264 3b1c55ce02db47823f60a5fbcfb3356e 416 TIGRFAM TIGR01879 hydantase: amidase, hydantoinase/carbamoylase family 13 410 5.7E-119 T 14-10-2018 IPR010158 Amidase, carbamoylase-type GO:0016813 PhaeoP54_01264 3b1c55ce02db47823f60a5fbcfb3356e 416 SUPERFAMILY SSF55031 216 332 5.08E-28 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain PhaeoP54_01264 3b1c55ce02db47823f60a5fbcfb3356e 416 PIRSF PIRSF001235 7 415 1.4E-121 T 14-10-2018 IPR010158 Amidase, carbamoylase-type GO:0016813 PhaeoP54_01264 3b1c55ce02db47823f60a5fbcfb3356e 416 Gene3D G3DSA:3.30.70.360 216 330 1.3E-141 T 14-10-2018 PhaeoP54_01264 3b1c55ce02db47823f60a5fbcfb3356e 416 SUPERFAMILY SSF53187 6 412 2.74E-93 T 14-10-2018 PhaeoP54_01264 3b1c55ce02db47823f60a5fbcfb3356e 416 Pfam PF07687 Peptidase dimerisation domain 215 314 8.1E-6 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain PhaeoP54_01264 3b1c55ce02db47823f60a5fbcfb3356e 416 Pfam PF01546 Peptidase family M20/M25/M40 84 409 1.9E-40 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 PhaeoP54_03146 4f4a7040d04815b6cf16d45e34029fd3 73 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 70 2.6E-31 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PhaeoP54_03146 4f4a7040d04815b6cf16d45e34029fd3 73 ProSitePatterns PS01143 Ribosomal protein L31 signature. 38 60 - T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PhaeoP54_03146 4f4a7040d04815b6cf16d45e34029fd3 73 PRINTS PR01249 Ribosomal protein L31 signature 2 19 7.1E-8 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PhaeoP54_03146 4f4a7040d04815b6cf16d45e34029fd3 73 PRINTS PR01249 Ribosomal protein L31 signature 50 68 7.1E-8 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PhaeoP54_03146 4f4a7040d04815b6cf16d45e34029fd3 73 Pfam PF01197 Ribosomal protein L31 1 69 1.4E-22 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PhaeoP54_03146 4f4a7040d04815b6cf16d45e34029fd3 73 Hamap MF_00501 50S ribosomal protein L31 [rpmE]. 1 72 24.53 T 14-10-2018 IPR027491 Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 PhaeoP54_03146 4f4a7040d04815b6cf16d45e34029fd3 73 Gene3D G3DSA:2.30.170.50 1 72 1.0E-18 T 14-10-2018 PhaeoP54_03146 4f4a7040d04815b6cf16d45e34029fd3 73 SUPERFAMILY SSF143800 1 71 7.85E-20 T 14-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PhaeoP54_01828 0c948d8fa8f9df7a2c9fa6ac76ee1ed1 553 PRINTS PR01755 Bacterial translocase SecF protein signature 487 502 4.0E-5 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial PhaeoP54_01828 0c948d8fa8f9df7a2c9fa6ac76ee1ed1 553 PRINTS PR01755 Bacterial translocase SecF protein signature 65 80 4.0E-5 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial PhaeoP54_01828 0c948d8fa8f9df7a2c9fa6ac76ee1ed1 553 PRINTS PR01755 Bacterial translocase SecF protein signature 453 471 4.0E-5 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial PhaeoP54_01828 0c948d8fa8f9df7a2c9fa6ac76ee1ed1 553 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 302 532 2.7E-83 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial PhaeoP54_01828 0c948d8fa8f9df7a2c9fa6ac76ee1ed1 553 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 69 539 1.5E-148 T 14-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 PhaeoP54_01828 0c948d8fa8f9df7a2c9fa6ac76ee1ed1 553 Gene3D G3DSA:3.30.70.3400 159 245 1.8E-16 T 14-10-2018 PhaeoP54_01828 0c948d8fa8f9df7a2c9fa6ac76ee1ed1 553 Gene3D G3DSA:3.30.1360.200 250 365 6.0E-38 T 14-10-2018 PhaeoP54_01828 0c948d8fa8f9df7a2c9fa6ac76ee1ed1 553 Gene3D G3DSA:1.20.1640.10 366 552 6.4E-14 T 14-10-2018 PhaeoP54_01828 0c948d8fa8f9df7a2c9fa6ac76ee1ed1 553 Pfam PF02355 Protein export membrane protein 373 544 3.0E-22 T 14-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial PhaeoP54_01828 0c948d8fa8f9df7a2c9fa6ac76ee1ed1 553 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 2 552 44.885 T 14-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 PhaeoP54_01828 0c948d8fa8f9df7a2c9fa6ac76ee1ed1 553 SUPERFAMILY SSF82866 289 548 1.1E-48 T 14-10-2018 PhaeoP54_00668 102a3bedd63b75a513c1a7b592d45e0a 292 Gene3D G3DSA:1.10.10.10 5 91 5.7E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_00668 102a3bedd63b75a513c1a7b592d45e0a 292 SUPERFAMILY SSF53850 92 290 4.52E-35 T 14-10-2018 PhaeoP54_00668 102a3bedd63b75a513c1a7b592d45e0a 292 Pfam PF03466 LysR substrate binding domain 90 287 7.6E-32 T 14-10-2018 IPR005119 LysR, substrate-binding PhaeoP54_00668 102a3bedd63b75a513c1a7b592d45e0a 292 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 7.1E-21 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PhaeoP54_00668 102a3bedd63b75a513c1a7b592d45e0a 292 Gene3D G3DSA:3.40.190.290 93 288 2.9E-34 T 14-10-2018 PhaeoP54_00668 102a3bedd63b75a513c1a7b592d45e0a 292 SUPERFAMILY SSF46785 4 114 5.28E-24 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_00668 102a3bedd63b75a513c1a7b592d45e0a 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 3.1E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PhaeoP54_00668 102a3bedd63b75a513c1a7b592d45e0a 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 3.1E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PhaeoP54_00668 102a3bedd63b75a513c1a7b592d45e0a 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 3.1E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PhaeoP54_03072 ef090109a8fd0ff26013065c7b9ef8ee 308 SUPERFAMILY SSF52402 3 182 6.84E-47 T 14-10-2018 PhaeoP54_03072 ef090109a8fd0ff26013065c7b9ef8ee 308 SMART SM00893 3 181 9.6E-47 T 14-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 PhaeoP54_03072 ef090109a8fd0ff26013065c7b9ef8ee 308 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 189 271 2.4E-37 T 14-10-2018 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal Reactome: R-HSA-611105 PhaeoP54_03072 ef090109a8fd0ff26013065c7b9ef8ee 308 Gene3D G3DSA:3.40.50.620 2 182 1.1E-50 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PhaeoP54_03072 ef090109a8fd0ff26013065c7b9ef8ee 308 Pfam PF01012 Electron transfer flavoprotein domain 4 170 1.2E-32 T 14-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 PhaeoP54_03072 ef090109a8fd0ff26013065c7b9ef8ee 308 SUPERFAMILY SSF52467 188 308 1.87E-49 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily PhaeoP54_03072 ef090109a8fd0ff26013065c7b9ef8ee 308 Gene3D G3DSA:3.40.50.1220 183 308 9.3E-59 T 14-10-2018 PhaeoP54_03072 ef090109a8fd0ff26013065c7b9ef8ee 308 ProSitePatterns PS00696 Electron transfer flavoprotein alpha-subunit signature. 252 278 - T 14-10-2018 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site Reactome: R-HSA-611105 PhaeoP54_03072 ef090109a8fd0ff26013065c7b9ef8ee 308 PIRSF PIRSF000089 1 308 7.7E-106 T 14-10-2018 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 Reactome: R-HSA-611105 PhaeoP54_02511 98de0f736dbd9bae45441e063e6f3de3 732 Gene3D G3DSA:3.40.50.300 21 260 5.7E-73 T 14-10-2018 PhaeoP54_02511 98de0f736dbd9bae45441e063e6f3de3 732 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 29 681 4.8E-303 T 14-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 PhaeoP54_02511 98de0f736dbd9bae45441e063e6f3de3 732 Pfam PF00271 Helicase conserved C-terminal domain 467 570 2.9E-17 T 14-10-2018 IPR001650 Helicase, C-terminal PhaeoP54_02511 98de0f736dbd9bae45441e063e6f3de3 732 Pfam PF12344 Ultra-violet resistance protein B 577 618 1.1E-22 T 14-10-2018 IPR024759 UvrB, YAD/RRR-motif-containing domain PhaeoP54_02511 98de0f736dbd9bae45441e063e6f3de3 732 Gene3D G3DSA:4.10.860.10 634 689 7.1E-9 T 14-10-2018 PhaeoP54_02511 98de0f736dbd9bae45441e063e6f3de3 732 Hamap MF_00204 UvrABC system protein B [uvrB]. 28 684 41.385 T 14-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 PhaeoP54_02511 98de0f736dbd9bae45441e063e6f3de3 732 SMART SM00487 34 451 8.1E-20 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain PhaeoP54_02511 98de0f736dbd9bae45441e063e6f3de3 732 SUPERFAMILY SSF52540 57 611 2.05E-35 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_02511 98de0f736dbd9bae45441e063e6f3de3 732 Gene3D G3DSA:3.40.50.300 440 621 7.0E-50 T 14-10-2018 PhaeoP54_02511 98de0f736dbd9bae45441e063e6f3de3 732 Pfam PF02151 UvrB/uvrC motif 654 683 2.7E-9 T 14-10-2018 IPR001943 UVR domain GO:0005515 PhaeoP54_02511 98de0f736dbd9bae45441e063e6f3de3 732 SUPERFAMILY SSF46600 643 684 2.22E-10 T 14-10-2018 IPR036876 UVR domain superfamily PhaeoP54_02511 98de0f736dbd9bae45441e063e6f3de3 732 SMART SM00490 485 571 1.8E-18 T 14-10-2018 IPR001650 Helicase, C-terminal PhaeoP54_02511 98de0f736dbd9bae45441e063e6f3de3 732 Pfam PF04851 Type III restriction enzyme, res subunit 40 164 1.7E-11 T 14-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 PhaeoP54_02511 98de0f736dbd9bae45441e063e6f3de3 732 Gene3D G3DSA:3.40.50.300 304 439 7.1E-45 T 14-10-2018 PhaeoP54_02511 98de0f736dbd9bae45441e063e6f3de3 732 SUPERFAMILY SSF52540 31 435 3.06E-126 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_01943 95bb7ab41a1623bb8f3e83a44d867927 257 SUPERFAMILY SSF52833 79 248 2.44E-38 T 14-10-2018 IPR036249 Thioredoxin-like superfamily PhaeoP54_01943 95bb7ab41a1623bb8f3e83a44d867927 257 Pfam PF13462 Thioredoxin 91 249 1.2E-20 T 14-10-2018 IPR012336 Thioredoxin-like fold PhaeoP54_01943 95bb7ab41a1623bb8f3e83a44d867927 257 Gene3D G3DSA:3.40.30.10 79 253 5.3E-37 T 14-10-2018 PhaeoP54_02398 af8e0a84b55bb4f719c808e963444ddd 248 Gene3D G3DSA:3.40.50.150 10 188 4.2E-16 T 14-10-2018 PhaeoP54_02398 af8e0a84b55bb4f719c808e963444ddd 248 Pfam PF08241 Methyltransferase domain 81 131 1.8E-5 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 PhaeoP54_02398 af8e0a84b55bb4f719c808e963444ddd 248 SUPERFAMILY SSF53335 20 203 2.48E-22 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PhaeoP54_00857 f176af3745f5d44fe7d5a0c2ac73b565 358 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 44 82 - T 14-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 PhaeoP54_00857 f176af3745f5d44fe7d5a0c2ac73b565 358 SUPERFAMILY SSF53597 139 353 4.25E-59 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 PhaeoP54_00857 f176af3745f5d44fe7d5a0c2ac73b565 358 Gene3D G3DSA:3.40.430.10 131 354 5.1E-67 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 PhaeoP54_00857 f176af3745f5d44fe7d5a0c2ac73b565 358 Gene3D G3DSA:3.40.140.10 1 127 7.6E-40 T 14-10-2018 PhaeoP54_00857 f176af3745f5d44fe7d5a0c2ac73b565 358 Pfam PF01872 RibD C-terminal domain 141 350 2.8E-42 T 14-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 PhaeoP54_00857 f176af3745f5d44fe7d5a0c2ac73b565 358 PIRSF PIRSF006769 1 357 4.9E-116 T 14-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 PhaeoP54_00857 f176af3745f5d44fe7d5a0c2ac73b565 358 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 1 350 3.7E-104 T 14-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 PhaeoP54_00857 f176af3745f5d44fe7d5a0c2ac73b565 358 SUPERFAMILY SSF53927 1 137 4.63E-42 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 PhaeoP54_00857 f176af3745f5d44fe7d5a0c2ac73b565 358 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 140 350 2.0E-53 T 14-10-2018 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 PhaeoP54_00857 f176af3745f5d44fe7d5a0c2ac73b565 358 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 1 93 1.2E-15 T 14-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain PhaeoP54_01804 3673d5075e8efdefdc6e563ca2f33ab0 734 SMART SM00304 400 452 1.6 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 PhaeoP54_01804 3673d5075e8efdefdc6e563ca2f33ab0 734 SMART SM00304 306 358 0.52 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 PhaeoP54_01804 3673d5075e8efdefdc6e563ca2f33ab0 734 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 512 666 4.7E-42 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 PhaeoP54_01804 3673d5075e8efdefdc6e563ca2f33ab0 734 Gene3D G3DSA:1.20.1480.50 267 364 1.8E-7 T 14-10-2018 PhaeoP54_01804 3673d5075e8efdefdc6e563ca2f33ab0 734 SMART SM00283 453 700 4.5E-79 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 PhaeoP54_01804 3673d5075e8efdefdc6e563ca2f33ab0 734 SMART SM01358 19 277 1.5E-19 T 14-10-2018 IPR032255 Helical bimodular sensor domain PhaeoP54_01804 3673d5075e8efdefdc6e563ca2f33ab0 734 Gene3D G3DSA:1.10.287.950 403 702 4.6E-72 T 14-10-2018 PhaeoP54_01804 3673d5075e8efdefdc6e563ca2f33ab0 734 SUPERFAMILY SSF58104 420 701 9.16E-62 T 14-10-2018 PhaeoP54_01546 1489d815a8e50cdd4eeb4493172e34ff 291 Gene3D G3DSA:1.10.286.20 197 235 8.5E-18 T 14-10-2018 PhaeoP54_01546 1489d815a8e50cdd4eeb4493172e34ff 291 SUPERFAMILY SSF54713 145 289 7.19E-49 T 14-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 PhaeoP54_01546 1489d815a8e50cdd4eeb4493172e34ff 291 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 288 5.4E-95 T 14-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 PhaeoP54_01546 1489d815a8e50cdd4eeb4493172e34ff 291 ProSitePatterns PS01126 Elongation factor Ts signature 1. 11 26 - T 14-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 PhaeoP54_01546 1489d815a8e50cdd4eeb4493172e34ff 291 Gene3D G3DSA:1.10.8.10 1 55 3.7E-26 T 14-10-2018 PhaeoP54_01546 1489d815a8e50cdd4eeb4493172e34ff 291 Gene3D G3DSA:3.30.479.20 56 144 1.2E-23 T 14-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 PhaeoP54_01546 1489d815a8e50cdd4eeb4493172e34ff 291 Hamap MF_00050 Elongation factor Ts [tsf]. 1 289 78.724 T 14-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 PhaeoP54_01546 1489d815a8e50cdd4eeb4493172e34ff 291 SUPERFAMILY SSF46934 3 54 2.44E-19 T 14-10-2018 IPR009060 UBA-like superfamily GO:0005515 PhaeoP54_01546 1489d815a8e50cdd4eeb4493172e34ff 291 SUPERFAMILY SSF54713 56 142 2.78E-21 T 14-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 PhaeoP54_01546 1489d815a8e50cdd4eeb4493172e34ff 291 Pfam PF00889 Elongation factor TS 70 272 1.7E-67 T 14-10-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0006414 Reactome: R-HSA-5389840 PhaeoP54_02554 bb57e927e01245177f6efb33dd077efb 285 Gene3D G3DSA:1.10.10.10 1 82 6.0E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_02554 bb57e927e01245177f6efb33dd077efb 285 Pfam PF03466 LysR substrate binding domain 86 282 1.2E-16 T 14-10-2018 IPR005119 LysR, substrate-binding PhaeoP54_02554 bb57e927e01245177f6efb33dd077efb 285 Gene3D G3DSA:3.40.190.290 89 283 2.2E-14 T 14-10-2018 PhaeoP54_02554 bb57e927e01245177f6efb33dd077efb 285 SUPERFAMILY SSF53850 80 283 1.63E-19 T 14-10-2018 PhaeoP54_02554 bb57e927e01245177f6efb33dd077efb 285 SUPERFAMILY SSF46785 1 103 2.56E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_02554 bb57e927e01245177f6efb33dd077efb 285 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 61 6.2E-14 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PhaeoP54_03788 84793c6c316b941b55c34f5eed7ebfcc 271 PIRSF PIRSF004846 16 269 2.8E-55 T 14-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 PhaeoP54_03788 84793c6c316b941b55c34f5eed7ebfcc 271 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 46 263 4.8E-52 T 14-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 PhaeoP54_03788 84793c6c316b941b55c34f5eed7ebfcc 271 Gene3D G3DSA:3.40.190.10 119 232 1.7E-66 T 14-10-2018 PhaeoP54_03788 84793c6c316b941b55c34f5eed7ebfcc 271 Gene3D G3DSA:3.40.190.10 43 266 1.7E-66 T 14-10-2018 PhaeoP54_03788 84793c6c316b941b55c34f5eed7ebfcc 271 SUPERFAMILY SSF53850 39 267 2.03E-56 T 14-10-2018 PhaeoP54_03788 84793c6c316b941b55c34f5eed7ebfcc 271 Pfam PF13531 Bacterial extracellular solute-binding protein 41 266 2.4E-40 T 14-10-2018 PhaeoP54_00302 87f17afc407e5594a8e5d1778c15628c 164 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 42 62 9.2E-12 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PhaeoP54_00302 87f17afc407e5594a8e5d1778c15628c 164 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 8 19 9.2E-12 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PhaeoP54_00302 87f17afc407e5594a8e5d1778c15628c 164 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 19 32 9.2E-12 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PhaeoP54_00302 87f17afc407e5594a8e5d1778c15628c 164 Gene3D G3DSA:1.10.1660.10 2 130 1.2E-33 T 14-10-2018 PhaeoP54_00302 87f17afc407e5594a8e5d1778c15628c 164 SUPERFAMILY SSF46955 7 129 1.39E-29 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily PhaeoP54_00302 87f17afc407e5594a8e5d1778c15628c 164 ProSitePatterns PS00552 MerR-type HTH domain signature. 10 32 - T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PhaeoP54_00302 87f17afc407e5594a8e5d1778c15628c 164 Pfam PF00376 MerR family regulatory protein 8 44 1.8E-11 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PhaeoP54_00302 87f17afc407e5594a8e5d1778c15628c 164 Pfam PF09278 MerR, DNA binding 49 114 1.5E-17 T 14-10-2018 IPR015358 Transcription regulator MerR, DNA binding PhaeoP54_00302 87f17afc407e5594a8e5d1778c15628c 164 SMART SM00422 7 75 4.6E-22 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PhaeoP54_00302 87f17afc407e5594a8e5d1778c15628c 164 TIGRFAM TIGR01950 SoxR: redox-sensitive transcriptional activator SoxR 7 145 3.1E-56 T 14-10-2018 IPR010211 Redox-sensitive transcriptional activator SoxR GO:0003677|GO:0006355|GO:0006979|GO:0051537 PhaeoP54_00012 362d787851dad5a43d6c0213924fe117 354 SMART SM01329 6 349 2.8E-165 T 14-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 PhaeoP54_00012 362d787851dad5a43d6c0213924fe117 354 Gene3D G3DSA:3.40.718.10 1 354 2.4E-126 T 14-10-2018 PhaeoP54_00012 362d787851dad5a43d6c0213924fe117 354 SUPERFAMILY SSF53659 2 353 8.45E-116 T 14-10-2018 PhaeoP54_00012 362d787851dad5a43d6c0213924fe117 354 TIGRFAM TIGR02089 TTC: tartrate dehydrogenase 3 352 3.1E-164 T 14-10-2018 IPR011829 Tartrate dehydrogenase GO:0016616|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.93|KEGG: 00650+1.1.1.83 PhaeoP54_00012 362d787851dad5a43d6c0213924fe117 354 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 242 261 - T 14-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 PhaeoP54_00012 362d787851dad5a43d6c0213924fe117 354 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 7 341 4.6E-86 T 14-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 PhaeoP54_01864 85a272bf4691f15c776659166a2d4687 204 Gene3D G3DSA:1.10.10.10 133 204 8.4E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_01864 85a272bf4691f15c776659166a2d4687 204 SUPERFAMILY SSF46894 126 203 1.22E-19 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PhaeoP54_01864 85a272bf4691f15c776659166a2d4687 204 Pfam PF00196 Bacterial regulatory proteins, luxR family 143 197 1.3E-17 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PhaeoP54_01864 85a272bf4691f15c776659166a2d4687 204 Gene3D G3DSA:3.40.50.2300 1 127 2.5E-23 T 14-10-2018 PhaeoP54_01864 85a272bf4691f15c776659166a2d4687 204 SMART SM00448 1 114 2.4E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PhaeoP54_01864 85a272bf4691f15c776659166a2d4687 204 SUPERFAMILY SSF52172 1 124 9.96E-23 T 14-10-2018 IPR011006 CheY-like superfamily PhaeoP54_01864 85a272bf4691f15c776659166a2d4687 204 SMART SM00421 141 198 9.7E-18 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PhaeoP54_01864 85a272bf4691f15c776659166a2d4687 204 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 158 174 1.4E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PhaeoP54_01864 85a272bf4691f15c776659166a2d4687 204 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 144 158 1.4E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PhaeoP54_01864 85a272bf4691f15c776659166a2d4687 204 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 174 186 1.4E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PhaeoP54_01864 85a272bf4691f15c776659166a2d4687 204 Pfam PF00072 Response regulator receiver domain 3 114 1.3E-19 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PhaeoP54_00767 506d96b4317b060d3aea76e5c32d732b 396 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 29 258 3.2E-59 T 14-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 PhaeoP54_00767 506d96b4317b060d3aea76e5c32d732b 396 SMART SM00936 280 370 1.3E-22 T 14-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 PhaeoP54_00767 506d96b4317b060d3aea76e5c32d732b 396 Gene3D G3DSA:3.40.710.10 22 279 2.0E-73 T 14-10-2018 PhaeoP54_00767 506d96b4317b060d3aea76e5c32d732b 396 Gene3D G3DSA:2.60.410.10 280 369 5.3E-17 T 14-10-2018 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 PhaeoP54_00767 506d96b4317b060d3aea76e5c32d732b 396 SUPERFAMILY SSF56601 11 280 9.08E-74 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like PhaeoP54_00767 506d96b4317b060d3aea76e5c32d732b 396 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 115 132 3.0E-14 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 PhaeoP54_00767 506d96b4317b060d3aea76e5c32d732b 396 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 62 73 3.0E-14 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 PhaeoP54_00767 506d96b4317b060d3aea76e5c32d732b 396 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 144 157 3.0E-14 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 PhaeoP54_00767 506d96b4317b060d3aea76e5c32d732b 396 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 280 369 1.6E-13 T 14-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 PhaeoP54_00767 506d96b4317b060d3aea76e5c32d732b 396 SUPERFAMILY SSF69189 280 372 1.96E-17 T 14-10-2018 IPR015956 Penicillin-binding protein, C-terminal domain superfamily GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 PhaeoP54_02931 cce9b705a62bf9e2ec7b2961c0a32f63 240 Gene3D G3DSA:1.10.357.10 16 193 5.5E-35 T 14-10-2018 PhaeoP54_02931 cce9b705a62bf9e2ec7b2961c0a32f63 240 Pfam PF08511 COQ9 122 197 5.8E-31 T 14-10-2018 IPR013718 COQ9 Reactome: R-HSA-2142789 PhaeoP54_02931 cce9b705a62bf9e2ec7b2961c0a32f63 240 TIGRFAM TIGR02396 diverge_rpsU: rpsU-divergently transcribed protein 21 202 7.0E-55 T 14-10-2018 IPR012762 Ubiquinone biosynthesis protein COQ9 GO:0006744 Reactome: R-HSA-2142789 PhaeoP54_01195 f5be8f3e625443ff017e0fc5dd102ef1 352 Pfam PF01180 Dihydroorotate dehydrogenase 44 332 1.1E-83 T 14-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 PhaeoP54_01195 f5be8f3e625443ff017e0fc5dd102ef1 352 PIRSF PIRSF000164 13 348 2.1E-96 T 14-10-2018 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 PhaeoP54_01195 f5be8f3e625443ff017e0fc5dd102ef1 352 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 79 98 - T 14-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 PhaeoP54_01195 f5be8f3e625443ff017e0fc5dd102ef1 352 SUPERFAMILY SSF51395 9 345 1.77E-100 T 14-10-2018 PhaeoP54_01195 f5be8f3e625443ff017e0fc5dd102ef1 352 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 284 304 - T 14-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 PhaeoP54_01195 f5be8f3e625443ff017e0fc5dd102ef1 352 Gene3D G3DSA:3.20.20.70 3 350 2.4E-128 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PhaeoP54_01195 f5be8f3e625443ff017e0fc5dd102ef1 352 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 10 347 4.9E-111 T 14-10-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 PhaeoP54_02688 6806c512d2e829dcb7026541470b0a9b 662 Gene3D G3DSA:1.10.3020.10 146 218 7.0E-61 T 14-10-2018 PhaeoP54_02688 6806c512d2e829dcb7026541470b0a9b 662 Gene3D G3DSA:3.40.50.1820 13 304 7.0E-61 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold PhaeoP54_02688 6806c512d2e829dcb7026541470b0a9b 662 SUPERFAMILY SSF53474 4 328 3.69E-70 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold PhaeoP54_02688 6806c512d2e829dcb7026541470b0a9b 662 Pfam PF02129 X-Pro dipeptidyl-peptidase (S15 family) 17 264 3.7E-59 T 14-10-2018 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain GO:0016787 PhaeoP54_02688 6806c512d2e829dcb7026541470b0a9b 662 TIGRFAM TIGR00976 /NonD: hydrolase CocE/NonD family protein 17 494 5.2E-69 T 14-10-2018 IPR005674 CocE/Serine esterase GO:0016787 PhaeoP54_02688 6806c512d2e829dcb7026541470b0a9b 662 SUPERFAMILY SSF49785 281 518 3.19E-49 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily PhaeoP54_02688 6806c512d2e829dcb7026541470b0a9b 662 Pfam PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain 294 512 3.3E-42 T 14-10-2018 IPR013736 Xaa-Pro dipeptidyl-peptidase, C-terminal GO:0008239 PhaeoP54_02688 6806c512d2e829dcb7026541470b0a9b 662 SMART SM00939 281 538 9.7E-77 T 14-10-2018 IPR013736 Xaa-Pro dipeptidyl-peptidase, C-terminal GO:0008239 PhaeoP54_02688 6806c512d2e829dcb7026541470b0a9b 662 Gene3D G3DSA:2.60.120.260 319 511 1.7E-33 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily PhaeoP54_02035 f12dc0bb7a644994f816863255e62c98 400 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 236 249 - T 14-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 PhaeoP54_02035 f12dc0bb7a644994f816863255e62c98 400 Gene3D G3DSA:3.90.1150.10 26 392 6.9E-135 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 PhaeoP54_02035 f12dc0bb7a644994f816863255e62c98 400 Gene3D G3DSA:3.40.640.10 63 286 6.9E-135 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PhaeoP54_02035 f12dc0bb7a644994f816863255e62c98 400 Pfam PF00155 Aminotransferase class I and II 32 392 3.4E-75 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 PhaeoP54_02035 f12dc0bb7a644994f816863255e62c98 400 SUPERFAMILY SSF53383 1 396 4.98E-113 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PhaeoP54_02292 b90e83ec3398180efe9201e7e1450010 604 Pfam PF06421 GTP-binding protein LepA C-terminus 495 601 5.8E-50 T 14-10-2018 IPR013842 GTP-binding protein LepA, C-terminal PhaeoP54_02292 b90e83ec3398180efe9201e7e1450010 604 SUPERFAMILY SSF52540 1 224 3.6E-53 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_02292 b90e83ec3398180efe9201e7e1450010 604 Gene3D G3DSA:3.30.70.870 289 370 1.9E-35 T 14-10-2018 PhaeoP54_02292 b90e83ec3398180efe9201e7e1450010 604 SUPERFAMILY SSF54980 294 373 5.04E-19 T 14-10-2018 IPR035647 EF-G domain III/V-like PhaeoP54_02292 b90e83ec3398180efe9201e7e1450010 604 SMART SM00838 406 492 1.6E-4 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like PhaeoP54_02292 b90e83ec3398180efe9201e7e1450010 604 SUPERFAMILY SSF54980 407 501 6.23E-25 T 14-10-2018 IPR035647 EF-G domain III/V-like PhaeoP54_02292 b90e83ec3398180efe9201e7e1450010 604 Pfam PF00679 Elongation factor G C-terminus 407 491 1.3E-20 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like PhaeoP54_02292 b90e83ec3398180efe9201e7e1450010 604 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 177 2.5E-19 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 PhaeoP54_02292 b90e83ec3398180efe9201e7e1450010 604 PRINTS PR00315 GTP-binding elongation factor signature 129 138 3.8E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PhaeoP54_02292 b90e83ec3398180efe9201e7e1450010 604 PRINTS PR00315 GTP-binding elongation factor signature 9 22 3.8E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PhaeoP54_02292 b90e83ec3398180efe9201e7e1450010 604 PRINTS PR00315 GTP-binding elongation factor signature 77 87 3.8E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PhaeoP54_02292 b90e83ec3398180efe9201e7e1450010 604 PRINTS PR00315 GTP-binding elongation factor signature 93 104 3.8E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PhaeoP54_02292 b90e83ec3398180efe9201e7e1450010 604 PRINTS PR00315 GTP-binding elongation factor signature 52 60 3.8E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PhaeoP54_02292 b90e83ec3398180efe9201e7e1450010 604 Pfam PF00009 Elongation factor Tu GTP binding domain 6 184 7.5E-51 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PhaeoP54_02292 b90e83ec3398180efe9201e7e1450010 604 Gene3D G3DSA:3.30.70.2570 488 561 3.1E-35 T 14-10-2018 IPR038363 LepA, C-terminal domain superfamily PhaeoP54_02292 b90e83ec3398180efe9201e7e1450010 604 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 45 60 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site PhaeoP54_02292 b90e83ec3398180efe9201e7e1450010 604 Gene3D G3DSA:3.30.70.3380 371 487 2.2E-38 T 14-10-2018 PhaeoP54_02292 b90e83ec3398180efe9201e7e1450010 604 Hamap MF_00071 Elongation factor 4 [lepA]. 1 604 298.846 T 14-10-2018 IPR006297 Elongation factor 4 GO:0005525 PhaeoP54_02292 b90e83ec3398180efe9201e7e1450010 604 TIGRFAM TIGR01393 lepA: elongation factor 4 6 603 5.0E-288 T 14-10-2018 IPR006297 Elongation factor 4 GO:0005525 PhaeoP54_02292 b90e83ec3398180efe9201e7e1450010 604 Gene3D G3DSA:2.40.30.10 189 288 3.6E-31 T 14-10-2018 PhaeoP54_02292 b90e83ec3398180efe9201e7e1450010 604 Pfam PF03144 Elongation factor Tu domain 2 208 278 1.5E-10 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 PhaeoP54_02292 b90e83ec3398180efe9201e7e1450010 604 Gene3D G3DSA:3.40.50.300 3 188 6.9E-71 T 14-10-2018 PhaeoP54_01516 35c4f9b2e09a0236a2ef60cee57643ae 606 Gene3D G3DSA:3.30.70.240 390 483 5.8E-127 T 14-10-2018 PhaeoP54_01516 35c4f9b2e09a0236a2ef60cee57643ae 606 Pfam PF00679 Elongation factor G C-terminus 398 481 8.6E-20 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like PhaeoP54_01516 35c4f9b2e09a0236a2ef60cee57643ae 606 SUPERFAMILY SSF54980 399 513 1.01E-24 T 14-10-2018 IPR035647 EF-G domain III/V-like PhaeoP54_01516 35c4f9b2e09a0236a2ef60cee57643ae 606 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 3 139 2.9E-25 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 PhaeoP54_01516 35c4f9b2e09a0236a2ef60cee57643ae 606 Gene3D G3DSA:2.40.50.250 484 600 5.8E-127 T 14-10-2018 PhaeoP54_01516 35c4f9b2e09a0236a2ef60cee57643ae 606 SUPERFAMILY SSF52540 3 199 1.34E-53 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_01516 35c4f9b2e09a0236a2ef60cee57643ae 606 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 3 600 1.4E-276 T 14-10-2018 IPR006298 GTP-binding protein TypA GO:0005525 PhaeoP54_01516 35c4f9b2e09a0236a2ef60cee57643ae 606 Gene3D G3DSA:3.40.50.300 2 196 4.9E-64 T 14-10-2018 PhaeoP54_01516 35c4f9b2e09a0236a2ef60cee57643ae 606 SMART SM00838 396 485 0.0041 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like PhaeoP54_01516 35c4f9b2e09a0236a2ef60cee57643ae 606 Pfam PF03144 Elongation factor Tu domain 2 219 285 7.6E-9 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 PhaeoP54_01516 35c4f9b2e09a0236a2ef60cee57643ae 606 PRINTS PR00315 GTP-binding elongation factor signature 85 96 4.3E-15 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PhaeoP54_01516 35c4f9b2e09a0236a2ef60cee57643ae 606 PRINTS PR00315 GTP-binding elongation factor signature 49 57 4.3E-15 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PhaeoP54_01516 35c4f9b2e09a0236a2ef60cee57643ae 606 PRINTS PR00315 GTP-binding elongation factor signature 121 130 4.3E-15 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PhaeoP54_01516 35c4f9b2e09a0236a2ef60cee57643ae 606 PRINTS PR00315 GTP-binding elongation factor signature 69 79 4.3E-15 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PhaeoP54_01516 35c4f9b2e09a0236a2ef60cee57643ae 606 PRINTS PR00315 GTP-binding elongation factor signature 5 18 4.3E-15 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PhaeoP54_01516 35c4f9b2e09a0236a2ef60cee57643ae 606 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 42 57 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site PhaeoP54_01516 35c4f9b2e09a0236a2ef60cee57643ae 606 Gene3D G3DSA:3.30.70.870 307 591 5.8E-127 T 14-10-2018 PhaeoP54_01516 35c4f9b2e09a0236a2ef60cee57643ae 606 SUPERFAMILY SSF54980 303 388 1.29E-11 T 14-10-2018 IPR035647 EF-G domain III/V-like PhaeoP54_01516 35c4f9b2e09a0236a2ef60cee57643ae 606 Gene3D G3DSA:2.40.30.10 200 300 2.1E-27 T 14-10-2018 PhaeoP54_01516 35c4f9b2e09a0236a2ef60cee57643ae 606 SUPERFAMILY SSF50447 150 299 6.24E-26 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily PhaeoP54_01516 35c4f9b2e09a0236a2ef60cee57643ae 606 Pfam PF00009 Elongation factor Tu GTP binding domain 3 193 7.1E-54 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PhaeoP54_01600 835d2f5642bba757ecb8eb442b81787e 368 Gene3D G3DSA:2.40.370.10 54 243 2.5E-65 T 14-10-2018 IPR023374 AttH-like domain superfamily PhaeoP54_01600 835d2f5642bba757ecb8eb442b81787e 368 Pfam PF17186 Lipocalin-like domain 243 363 7.9E-39 T 14-10-2018 PhaeoP54_01600 835d2f5642bba757ecb8eb442b81787e 368 Gene3D G3DSA:2.40.370.10 244 367 2.8E-29 T 14-10-2018 IPR023374 AttH-like domain superfamily PhaeoP54_01600 835d2f5642bba757ecb8eb442b81787e 368 SUPERFAMILY SSF159245 43 363 4.32E-108 T 14-10-2018 PhaeoP54_01600 835d2f5642bba757ecb8eb442b81787e 368 Pfam PF07143 CrtC N-terminal lipocalin domain 66 240 1.3E-55 T 14-10-2018 IPR010791 AttH domain PhaeoP54_04059 c5e298a69fbee14207f81913ec713cd3 350 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 2 336 1.4E-148 T 14-10-2018 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|KEGG: 00525+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 PhaeoP54_04059 c5e298a69fbee14207f81913ec713cd3 350 Gene3D G3DSA:3.40.50.720 2 321 2.5E-132 T 14-10-2018 PhaeoP54_04059 c5e298a69fbee14207f81913ec713cd3 350 Gene3D G3DSA:3.90.25.10 199 330 2.5E-132 T 14-10-2018 PhaeoP54_04059 c5e298a69fbee14207f81913ec713cd3 350 SUPERFAMILY SSF51735 1 336 5.2E-101 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PhaeoP54_04059 c5e298a69fbee14207f81913ec713cd3 350 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 322 4.6E-97 T 14-10-2018 IPR016040 NAD(P)-binding domain PhaeoP54_03229 ece048f95f297140a3fb2abdf3f39510 131 SUPERFAMILY SSF89919 12 122 7.19E-30 T 14-10-2018 IPR023799 Ribosome-binding factor A domain superfamily PhaeoP54_03229 ece048f95f297140a3fb2abdf3f39510 131 Pfam PF02033 Ribosome-binding factor A 15 116 7.7E-25 T 14-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 PhaeoP54_03229 ece048f95f297140a3fb2abdf3f39510 131 ProSitePatterns PS01319 Ribosome-binding factor A signature. 86 107 - T 14-10-2018 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 PhaeoP54_03229 ece048f95f297140a3fb2abdf3f39510 131 Gene3D G3DSA:3.30.300.20 11 114 9.1E-24 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta PhaeoP54_03229 ece048f95f297140a3fb2abdf3f39510 131 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 18 106 2.0E-38 T 14-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 PhaeoP54_03229 ece048f95f297140a3fb2abdf3f39510 131 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 14 120 23.277 T 14-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 PhaeoP54_02808 8a206a50cfee8991b17e1ade627d3a48 183 Pfam PF01965 DJ-1/PfpI family 8 175 9.4E-49 T 14-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 PhaeoP54_02808 8a206a50cfee8991b17e1ade627d3a48 183 Gene3D G3DSA:3.40.50.880 2 181 2.1E-52 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like PhaeoP54_02808 8a206a50cfee8991b17e1ade627d3a48 183 SUPERFAMILY SSF52317 7 176 5.56E-49 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like PhaeoP54_02808 8a206a50cfee8991b17e1ade627d3a48 183 TIGRFAM TIGR01382 PfpI: intracellular protease, PfpI family 8 176 1.9E-50 T 14-10-2018 IPR006286 Deglycase PfpI PhaeoP54_01464 b9bbfdff4c8c15ca517eb72e85409326 380 SMART SM00388 141 205 2.7E-10 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PhaeoP54_01464 b9bbfdff4c8c15ca517eb72e85409326 380 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 246 361 4.0E-18 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PhaeoP54_01464 b9bbfdff4c8c15ca517eb72e85409326 380 SUPERFAMILY SSF55874 209 361 1.7E-34 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PhaeoP54_01464 b9bbfdff4c8c15ca517eb72e85409326 380 SUPERFAMILY SSF47384 138 200 2.16E-8 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 PhaeoP54_01464 b9bbfdff4c8c15ca517eb72e85409326 380 Gene3D G3DSA:3.30.450.20 12 119 2.3E-6 T 14-10-2018 PhaeoP54_01464 b9bbfdff4c8c15ca517eb72e85409326 380 SUPERFAMILY SSF55785 20 115 5.93E-7 T 14-10-2018 IPR035965 PAS domain superfamily PhaeoP54_01464 b9bbfdff4c8c15ca517eb72e85409326 380 Pfam PF00512 His Kinase A (phospho-acceptor) domain 146 201 2.9E-10 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PhaeoP54_01464 b9bbfdff4c8c15ca517eb72e85409326 380 SMART SM00387 246 365 1.7E-32 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PhaeoP54_01464 b9bbfdff4c8c15ca517eb72e85409326 380 Gene3D G3DSA:3.30.565.10 205 363 8.7E-37 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PhaeoP54_01464 b9bbfdff4c8c15ca517eb72e85409326 380 Gene3D G3DSA:1.10.287.130 145 200 8.8E-9 T 14-10-2018 PhaeoP54_01464 b9bbfdff4c8c15ca517eb72e85409326 380 Pfam PF08448 PAS fold 23 116 7.3E-7 T 14-10-2018 IPR013656 PAS fold-4 PhaeoP54_01464 b9bbfdff4c8c15ca517eb72e85409326 380 PRINTS PR00344 Bacterial sensor protein C-terminal signature 297 311 1.1E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PhaeoP54_01464 b9bbfdff4c8c15ca517eb72e85409326 380 PRINTS PR00344 Bacterial sensor protein C-terminal signature 326 344 1.1E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PhaeoP54_01464 b9bbfdff4c8c15ca517eb72e85409326 380 PRINTS PR00344 Bacterial sensor protein C-terminal signature 315 325 1.1E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PhaeoP54_02196 e39022276f416cc997634bfe1555e4a8 815 Gene3D G3DSA:3.30.70.1400 491 713 5.1E-114 T 14-10-2018 PhaeoP54_02196 e39022276f416cc997634bfe1555e4a8 815 Gene3D G3DSA:3.30.9.10 89 325 1.7E-147 T 14-10-2018 PhaeoP54_02196 e39022276f416cc997634bfe1555e4a8 815 SUPERFAMILY SSF54373 223 325 4.32E-33 T 14-10-2018 PhaeoP54_02196 e39022276f416cc997634bfe1555e4a8 815 Pfam PF01571 Aminomethyltransferase folate-binding domain 425 699 1.4E-79 T 14-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain PhaeoP54_02196 e39022276f416cc997634bfe1555e4a8 815 Gene3D G3DSA:2.40.30.110 720 801 1.7E-17 T 14-10-2018 PhaeoP54_02196 e39022276f416cc997634bfe1555e4a8 815 Gene3D G3DSA:3.30.1360.120 423 688 5.1E-114 T 14-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 PhaeoP54_02196 e39022276f416cc997634bfe1555e4a8 815 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 708 800 5.0E-14 T 14-10-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 PhaeoP54_02196 e39022276f416cc997634bfe1555e4a8 815 SUPERFAMILY SSF103025 418 722 7.69E-99 T 14-10-2018 PhaeoP54_02196 e39022276f416cc997634bfe1555e4a8 815 Gene3D G3DSA:3.50.50.60 11 384 1.7E-147 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PhaeoP54_02196 e39022276f416cc997634bfe1555e4a8 815 Pfam PF01266 FAD dependent oxidoreductase 10 365 8.5E-62 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 PhaeoP54_02196 e39022276f416cc997634bfe1555e4a8 815 SUPERFAMILY SSF101790 729 813 3.6E-17 T 14-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal PhaeoP54_02196 e39022276f416cc997634bfe1555e4a8 815 Pfam PF16350 FAD dependent oxidoreductase central domain 368 423 6.2E-20 T 14-10-2018 IPR032503 FAD dependent oxidoreductase, central domain PhaeoP54_02196 e39022276f416cc997634bfe1555e4a8 815 SUPERFAMILY SSF51905 8 412 2.3E-65 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PhaeoP54_03893 c144768745f9bc8a5f2e41b0c225e754 291 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 35 277 1.1E-56 T 14-10-2018 PhaeoP54_03893 c144768745f9bc8a5f2e41b0c225e754 291 SUPERFAMILY SSF53850 31 285 5.18E-47 T 14-10-2018 PhaeoP54_03893 c144768745f9bc8a5f2e41b0c225e754 291 Gene3D G3DSA:3.40.190.10 35 256 5.5E-46 T 14-10-2018 PhaeoP54_03893 c144768745f9bc8a5f2e41b0c225e754 291 TIGRFAM TIGR01098 3A0109s03R: phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein 8 250 1.1E-43 T 14-10-2018 IPR005770 Phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein GO:0043190|GO:0055085 PhaeoP54_03893 c144768745f9bc8a5f2e41b0c225e754 291 Gene3D G3DSA:3.40.190.10 116 226 5.5E-46 T 14-10-2018 PhaeoP54_03640 cbdff9ab3670e6f26791826f9c76d6e1 518 SUPERFAMILY SSF50249 399 516 1.88E-32 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold PhaeoP54_03640 cbdff9ab3670e6f26791826f9c76d6e1 518 Pfam PF04679 ATP dependent DNA ligase C terminal region 413 503 2.7E-15 T 14-10-2018 IPR012309 DNA ligase, ATP-dependent, C-terminal GO:0003910|GO:0006281|GO:0006310 PhaeoP54_03640 cbdff9ab3670e6f26791826f9c76d6e1 518 TIGRFAM TIGR04120 DNA_lig_bact: DNA ligase, ATP-dependent, PP_1105 family 2 518 6.3E-243 T 14-10-2018 IPR026333 ATP-dependent DNA ligase, PP_1105 family PhaeoP54_03640 cbdff9ab3670e6f26791826f9c76d6e1 518 Pfam PF04675 DNA ligase N terminus 3 155 3.6E-7 T 14-10-2018 IPR012308 DNA ligase, ATP-dependent, N-terminal GO:0003677|GO:0003910|GO:0006281|GO:0006310 PhaeoP54_03640 cbdff9ab3670e6f26791826f9c76d6e1 518 Gene3D G3DSA:3.30.470.30 196 393 2.4E-41 T 14-10-2018 PhaeoP54_03640 cbdff9ab3670e6f26791826f9c76d6e1 518 Gene3D G3DSA:2.40.50.140 398 518 8.2E-32 T 14-10-2018 PhaeoP54_03640 cbdff9ab3670e6f26791826f9c76d6e1 518 SUPERFAMILY SSF56091 156 395 2.88E-47 T 14-10-2018 PhaeoP54_03640 cbdff9ab3670e6f26791826f9c76d6e1 518 Pfam PF01068 ATP dependent DNA ligase domain 210 393 2.6E-28 T 14-10-2018 IPR012310 DNA ligase, ATP-dependent, central GO:0003910|GO:0005524|GO:0006281|GO:0006310 PhaeoP54_03640 cbdff9ab3670e6f26791826f9c76d6e1 518 ProSitePatterns PS00697 ATP-dependent DNA ligase AMP-binding site. 222 230 - T 14-10-2018 IPR016059 DNA ligase, ATP-dependent, conserved site GO:0003909|GO:0051103 PhaeoP54_01656 94c766eccd6d0d1f9f5a2e6cea21e2ec 383 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 18 378 1.3E-87 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 PhaeoP54_01656 94c766eccd6d0d1f9f5a2e6cea21e2ec 383 Gene3D G3DSA:3.40.640.10 9 254 1.3E-71 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PhaeoP54_01656 94c766eccd6d0d1f9f5a2e6cea21e2ec 383 Gene3D G3DSA:3.90.1150.10 256 382 1.1E-23 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 PhaeoP54_01656 94c766eccd6d0d1f9f5a2e6cea21e2ec 383 PIRSF PIRSF001434 4 382 1.5E-110 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 PhaeoP54_01656 94c766eccd6d0d1f9f5a2e6cea21e2ec 383 SUPERFAMILY SSF53383 24 379 2.42E-81 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PhaeoP54_00303 5d63a6c4913ee6c64e81cc772e51112b 549 Pfam PF13450 NAD(P)-binding Rossmann-like domain 15 56 5.1E-8 T 14-10-2018 PhaeoP54_00303 5d63a6c4913ee6c64e81cc772e51112b 549 Gene3D G3DSA:3.30.70.20 451 544 3.5E-35 T 14-10-2018 PhaeoP54_00303 5d63a6c4913ee6c64e81cc772e51112b 549 Gene3D G3DSA:3.30.9.90 78 450 2.4E-181 T 14-10-2018 PhaeoP54_00303 5d63a6c4913ee6c64e81cc772e51112b 549 Pfam PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S 446 546 8.7E-46 T 14-10-2018 PhaeoP54_00303 5d63a6c4913ee6c64e81cc772e51112b 549 SUPERFAMILY SSF54373 209 305 6.28E-37 T 14-10-2018 PhaeoP54_00303 5d63a6c4913ee6c64e81cc772e51112b 549 Gene3D G3DSA:3.50.50.60 10 383 2.4E-181 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PhaeoP54_00303 5d63a6c4913ee6c64e81cc772e51112b 549 SUPERFAMILY SSF54862 450 549 3.7E-26 T 14-10-2018 PhaeoP54_00303 5d63a6c4913ee6c64e81cc772e51112b 549 SUPERFAMILY SSF51905 6 448 3.21E-52 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PhaeoP54_00303 5d63a6c4913ee6c64e81cc772e51112b 549 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 12 34 6.7E-5 T 14-10-2018 PhaeoP54_00303 5d63a6c4913ee6c64e81cc772e51112b 549 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 177 192 6.7E-5 T 14-10-2018 PhaeoP54_01827 ae17302b206ca92ca750e2c1c8b675bd 322 Gene3D G3DSA:1.20.1640.10 120 311 1.7E-11 T 14-10-2018 PhaeoP54_01827 ae17302b206ca92ca750e2c1c8b675bd 322 Pfam PF02355 Protein export membrane protein 117 301 1.1E-73 T 14-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial PhaeoP54_01827 ae17302b206ca92ca750e2c1c8b675bd 322 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 12 304 28.912 T 14-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 PhaeoP54_01827 ae17302b206ca92ca750e2c1c8b675bd 322 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 40 293 1.3E-91 T 14-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 PhaeoP54_01827 ae17302b206ca92ca750e2c1c8b675bd 322 Pfam PF07549 SecD/SecF GG Motif 35 56 6.4E-7 T 14-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site PhaeoP54_01827 ae17302b206ca92ca750e2c1c8b675bd 322 PRINTS PR01755 Bacterial translocase SecF protein signature 209 227 6.5E-35 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial PhaeoP54_01827 ae17302b206ca92ca750e2c1c8b675bd 322 PRINTS PR01755 Bacterial translocase SecF protein signature 161 175 6.5E-35 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial PhaeoP54_01827 ae17302b206ca92ca750e2c1c8b675bd 322 PRINTS PR01755 Bacterial translocase SecF protein signature 241 256 6.5E-35 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial PhaeoP54_01827 ae17302b206ca92ca750e2c1c8b675bd 322 PRINTS PR01755 Bacterial translocase SecF protein signature 39 54 6.5E-35 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial PhaeoP54_01827 ae17302b206ca92ca750e2c1c8b675bd 322 SUPERFAMILY SSF82866 91 306 3.79E-43 T 14-10-2018 PhaeoP54_01827 ae17302b206ca92ca750e2c1c8b675bd 322 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 101 290 4.5E-61 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial PhaeoP54_02397 29a1fdc6dc138199fe56005010035a88 186 PRINTS PR00125 ATP synthase delta subunit signature 81 92 4.1E-26 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 PhaeoP54_02397 29a1fdc6dc138199fe56005010035a88 186 PRINTS PR00125 ATP synthase delta subunit signature 92 106 4.1E-26 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 PhaeoP54_02397 29a1fdc6dc138199fe56005010035a88 186 PRINTS PR00125 ATP synthase delta subunit signature 142 157 4.1E-26 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 PhaeoP54_02397 29a1fdc6dc138199fe56005010035a88 186 PRINTS PR00125 ATP synthase delta subunit signature 11 30 4.1E-26 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 PhaeoP54_02397 29a1fdc6dc138199fe56005010035a88 186 PRINTS PR00125 ATP synthase delta subunit signature 157 175 4.1E-26 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 PhaeoP54_02397 29a1fdc6dc138199fe56005010035a88 186 Pfam PF00213 ATP synthase delta (OSCP) subunit 11 182 1.9E-49 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 PhaeoP54_02397 29a1fdc6dc138199fe56005010035a88 186 Gene3D G3DSA:1.10.520.20 10 104 2.9E-18 T 14-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 PhaeoP54_02397 29a1fdc6dc138199fe56005010035a88 186 SUPERFAMILY SSF47928 9 112 1.12E-21 T 14-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 PhaeoP54_02397 29a1fdc6dc138199fe56005010035a88 186 Hamap MF_01416 ATP synthase subunit delta [atpD]. 7 184 19.81 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 PhaeoP54_02397 29a1fdc6dc138199fe56005010035a88 186 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 11 181 4.6E-40 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 PhaeoP54_02397 29a1fdc6dc138199fe56005010035a88 186 ProSitePatterns PS00389 ATP synthase delta (OSCP) subunit signature. 144 163 - T 14-10-2018 IPR020781 ATPase, OSCP/delta subunit, conserved site GO:0015986|GO:0016020|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 PhaeoP54_01705 182e91e33eb46a12647f3ccb4b167fc7 370 PRINTS PR01270 Histone deacetylase superfamily signature 258 268 5.4E-15 T 14-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 PhaeoP54_01705 182e91e33eb46a12647f3ccb4b167fc7 370 PRINTS PR01270 Histone deacetylase superfamily signature 139 162 5.4E-15 T 14-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 PhaeoP54_01705 182e91e33eb46a12647f3ccb4b167fc7 370 PRINTS PR01270 Histone deacetylase superfamily signature 173 188 5.4E-15 T 14-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 PhaeoP54_01705 182e91e33eb46a12647f3ccb4b167fc7 370 Pfam PF00850 Histone deacetylase domain 42 327 1.4E-70 T 14-10-2018 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 PhaeoP54_01705 182e91e33eb46a12647f3ccb4b167fc7 370 SUPERFAMILY SSF52768 3 355 1.29E-93 T 14-10-2018 IPR023696 Ureohydrolase domain superfamily PhaeoP54_01705 182e91e33eb46a12647f3ccb4b167fc7 370 Gene3D G3DSA:3.40.800.20 2 370 4.4E-126 T 14-10-2018 IPR037138 Histone deacetylase domain superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 PhaeoP54_03404 5214c1180bb2629147acd1a4d4903180 326 PRINTS PR00111 Alpha/beta hydrolase fold signature 116 129 1.7E-6 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 PhaeoP54_03404 5214c1180bb2629147acd1a4d4903180 326 PRINTS PR00111 Alpha/beta hydrolase fold signature 130 143 1.7E-6 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 PhaeoP54_03404 5214c1180bb2629147acd1a4d4903180 326 PRINTS PR00111 Alpha/beta hydrolase fold signature 70 85 1.7E-6 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 PhaeoP54_03404 5214c1180bb2629147acd1a4d4903180 326 SUPERFAMILY SSF53474 11 305 4.63E-61 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold PhaeoP54_03404 5214c1180bb2629147acd1a4d4903180 326 PIRSF PIRSF006431 9 324 2.1E-135 T 14-10-2018 IPR005944 Proline iminopeptidase GO:0004177|GO:0005737|GO:0006508 KEGG: 00330+3.4.11.5 PhaeoP54_03404 5214c1180bb2629147acd1a4d4903180 326 Pfam PF00561 alpha/beta hydrolase fold 46 304 6.1E-33 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 PhaeoP54_03404 5214c1180bb2629147acd1a4d4903180 326 Gene3D G3DSA:3.40.50.1820 9 323 5.7E-102 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold PhaeoP54_03404 5214c1180bb2629147acd1a4d4903180 326 TIGRFAM TIGR01249 pro_imino_pep_1: prolyl aminopeptidase 19 320 2.6E-122 T 14-10-2018 IPR005944 Proline iminopeptidase GO:0004177|GO:0005737|GO:0006508 KEGG: 00330+3.4.11.5 PhaeoP54_03404 5214c1180bb2629147acd1a4d4903180 326 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 73 84 9.4E-13 T 14-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 PhaeoP54_03404 5214c1180bb2629147acd1a4d4903180 326 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 116 130 9.4E-13 T 14-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 PhaeoP54_03404 5214c1180bb2629147acd1a4d4903180 326 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 47 55 9.4E-13 T 14-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 PhaeoP54_03933 46bea5ca115e4c0d0674bb6be7b029d8 121 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 4 121 35.115 T 14-10-2018 IPR002930 Glycine cleavage system H-protein GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 PhaeoP54_03933 46bea5ca115e4c0d0674bb6be7b029d8 121 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 43 72 - T 14-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 PhaeoP54_03933 46bea5ca115e4c0d0674bb6be7b029d8 121 Pfam PF01597 Glycine cleavage H-protein 4 119 1.9E-41 T 14-10-2018 IPR033753 Glycine cleavage system H-protein/Simiate PhaeoP54_03933 46bea5ca115e4c0d0674bb6be7b029d8 121 Gene3D G3DSA:2.40.50.100 1 121 4.3E-46 T 14-10-2018 PhaeoP54_03933 46bea5ca115e4c0d0674bb6be7b029d8 121 SUPERFAMILY SSF51230 3 120 2.79E-41 T 14-10-2018 IPR011053 Single hybrid motif PhaeoP54_03933 46bea5ca115e4c0d0674bb6be7b029d8 121 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 4 120 1.9E-43 T 14-10-2018 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 PhaeoP54_00649 883e07142fc0c9d82a617d9b168110cd 526 Gene3D G3DSA:3.40.190.10 32 279 3.8E-115 T 14-10-2018 PhaeoP54_00649 883e07142fc0c9d82a617d9b168110cd 526 Gene3D G3DSA:3.90.76.10 56 166 3.8E-115 T 14-10-2018 PhaeoP54_00649 883e07142fc0c9d82a617d9b168110cd 526 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 66 443 2.0E-83 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain PhaeoP54_00649 883e07142fc0c9d82a617d9b168110cd 526 Gene3D G3DSA:3.10.105.10 280 505 3.8E-115 T 14-10-2018 PhaeoP54_00649 883e07142fc0c9d82a617d9b168110cd 526 SUPERFAMILY SSF53850 22 525 6.88E-123 T 14-10-2018 PhaeoP54_00649 883e07142fc0c9d82a617d9b168110cd 526 PIRSF PIRSF002741 19 520 3.1E-80 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 PhaeoP54_03255 ef9c4a0dd93d22d7977f7a723348952f 390 SUPERFAMILY SSF53901 269 389 9.44E-42 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 PhaeoP54_03255 ef9c4a0dd93d22d7977f7a723348952f 390 ProSitePatterns PS00099 Thiolases active site. 371 384 - T 14-10-2018 IPR020610 Thiolase, active site GO:0016747 PhaeoP54_03255 ef9c4a0dd93d22d7977f7a723348952f 390 Pfam PF02803 Thiolase, C-terminal domain 268 389 1.7E-42 T 14-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 PhaeoP54_03255 ef9c4a0dd93d22d7977f7a723348952f 390 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 388 6.8E-125 T 14-10-2018 IPR002155 Thiolase GO:0016747 PhaeoP54_03255 ef9c4a0dd93d22d7977f7a723348952f 390 PIRSF PIRSF000429 1 390 4.4E-113 T 14-10-2018 IPR002155 Thiolase GO:0016747 PhaeoP54_03255 ef9c4a0dd93d22d7977f7a723348952f 390 Pfam PF00108 Thiolase, N-terminal domain 4 260 2.9E-84 T 14-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 PhaeoP54_03255 ef9c4a0dd93d22d7977f7a723348952f 390 Gene3D G3DSA:3.40.47.10 124 387 1.8E-139 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 PhaeoP54_03255 ef9c4a0dd93d22d7977f7a723348952f 390 SUPERFAMILY SSF53901 4 267 1.74E-76 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 PhaeoP54_03255 ef9c4a0dd93d22d7977f7a723348952f 390 Gene3D G3DSA:3.40.47.10 5 273 1.8E-139 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 PhaeoP54_00100 1deb2566b4647f8dad650f7ee0077024 422 Pfam PF08245 Mur ligase middle domain 48 262 3.4E-11 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 PhaeoP54_00100 1deb2566b4647f8dad650f7ee0077024 422 Gene3D G3DSA:3.90.190.20 284 420 5.9E-19 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 PhaeoP54_00100 1deb2566b4647f8dad650f7ee0077024 422 TIGRFAM TIGR01499 folC: bifunctional protein FolC 24 418 2.4E-108 T 14-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 PhaeoP54_00100 1deb2566b4647f8dad650f7ee0077024 422 PIRSF PIRSF001563 1 420 1.6E-108 T 14-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 PhaeoP54_00100 1deb2566b4647f8dad650f7ee0077024 422 Gene3D G3DSA:3.40.1190.10 1 283 1.3E-87 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 PhaeoP54_00100 1deb2566b4647f8dad650f7ee0077024 422 SUPERFAMILY SSF53244 282 419 9.16E-22 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 PhaeoP54_00100 1deb2566b4647f8dad650f7ee0077024 422 ProSitePatterns PS01012 Folylpolyglutamate synthase signature 2. 137 152 - T 14-10-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 PhaeoP54_00100 1deb2566b4647f8dad650f7ee0077024 422 SUPERFAMILY SSF53623 5 282 4.32E-89 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 PhaeoP54_01938 b2b14a27384f1fa572a3cb40236e6b1f 374 Gene3D G3DSA:3.30.160.20 224 318 2.8E-92 T 14-10-2018 PhaeoP54_01938 b2b14a27384f1fa572a3cb40236e6b1f 374 Gene3D G3DSA:1.20.58.410 2 114 7.0E-24 T 14-10-2018 PhaeoP54_01938 b2b14a27384f1fa572a3cb40236e6b1f 374 Hamap MF_00094 Peptide chain release factor 2 [prfB]. 1 363 38.951 T 14-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 PhaeoP54_01938 b2b14a27384f1fa572a3cb40236e6b1f 374 SUPERFAMILY SSF75620 31 363 3.4E-125 T 14-10-2018 PhaeoP54_01938 b2b14a27384f1fa572a3cb40236e6b1f 374 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 243 259 - T 14-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 PhaeoP54_01938 b2b14a27384f1fa572a3cb40236e6b1f 374 Pfam PF03462 PCRF domain 31 218 9.3E-56 T 14-10-2018 IPR005139 Peptide chain release factor GO:0006415 PhaeoP54_01938 b2b14a27384f1fa572a3cb40236e6b1f 374 SMART SM00937 83 193 1.5E-52 T 14-10-2018 IPR005139 Peptide chain release factor GO:0006415 PhaeoP54_01938 b2b14a27384f1fa572a3cb40236e6b1f 374 Pfam PF00472 RF-1 domain 226 335 5.6E-37 T 14-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 PhaeoP54_01938 b2b14a27384f1fa572a3cb40236e6b1f 374 TIGRFAM TIGR00020 prfB: peptide chain release factor 2 3 360 6.6E-149 T 14-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 PhaeoP54_01938 b2b14a27384f1fa572a3cb40236e6b1f 374 Gene3D G3DSA:3.30.70.1660 128 355 2.8E-92 T 14-10-2018 PhaeoP54_00247 f88b67159115a1884f04d56d850ebb76 356 Gene3D G3DSA:3.40.10.10 7 75 3.1E-26 T 14-10-2018 IPR035451 Ada-like domain superfamily PhaeoP54_00247 f88b67159115a1884f04d56d850ebb76 356 Gene3D G3DSA:1.10.10.60 88 182 2.5E-9 T 14-10-2018 PhaeoP54_00247 f88b67159115a1884f04d56d850ebb76 356 SUPERFAMILY SSF53155 187 271 1.22E-12 T 14-10-2018 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily GO:0003908|GO:0006281 Reactome: R-HSA-5657655 PhaeoP54_00247 f88b67159115a1884f04d56d850ebb76 356 Gene3D G3DSA:1.10.10.10 265 350 8.5E-33 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_00247 f88b67159115a1884f04d56d850ebb76 356 SMART SM00342 103 179 1.7E-4 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PhaeoP54_00247 f88b67159115a1884f04d56d850ebb76 356 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 267 346 5.9E-30 T 14-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 PhaeoP54_00247 f88b67159115a1884f04d56d850ebb76 356 Pfam PF12833 Helix-turn-helix domain 106 178 1.4E-11 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PhaeoP54_00247 f88b67159115a1884f04d56d850ebb76 356 Pfam PF02805 Metal binding domain of Ada 11 73 1.3E-27 T 14-10-2018 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 PhaeoP54_00247 f88b67159115a1884f04d56d850ebb76 356 Gene3D G3DSA:3.30.160.70 185 261 2.4E-7 T 14-10-2018 PhaeoP54_00247 f88b67159115a1884f04d56d850ebb76 356 PIRSF PIRSF000409 1 354 8.7E-141 T 14-10-2018 IPR016221 Bifunctional regulatory protein Ada PhaeoP54_00247 f88b67159115a1884f04d56d850ebb76 356 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 316 322 - T 14-10-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 PhaeoP54_00247 f88b67159115a1884f04d56d850ebb76 356 SUPERFAMILY SSF57884 2 88 5.62E-32 T 14-10-2018 IPR035451 Ada-like domain superfamily PhaeoP54_00247 f88b67159115a1884f04d56d850ebb76 356 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 266 345 2.0E-32 T 14-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 PhaeoP54_00247 f88b67159115a1884f04d56d850ebb76 356 SUPERFAMILY SSF46767 265 346 2.49E-30 T 14-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 PhaeoP54_01614 9903894ba32d73ad1fe0ccf8f088cb27 284 Gene3D G3DSA:3.40.50.300 1 282 1.8E-76 T 14-10-2018 PhaeoP54_01614 9903894ba32d73ad1fe0ccf8f088cb27 284 Pfam PF00005 ABC transporter 27 182 4.1E-23 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PhaeoP54_01614 9903894ba32d73ad1fe0ccf8f088cb27 284 SUPERFAMILY SSF52540 4 248 2.15E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_01614 9903894ba32d73ad1fe0ccf8f088cb27 284 SMART SM00382 32 239 1.3E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_01699 185673186338951e19f34062e1f308e6 120 PIRSF PIRSF005894 1 108 1.3E-46 T 14-10-2018 IPR014434 Monothiol glutaredoxin GO:0015036 Reactome: R-HSA-1362409 PhaeoP54_01699 185673186338951e19f34062e1f308e6 120 SUPERFAMILY SSF52833 1 104 9.19E-34 T 14-10-2018 IPR036249 Thioredoxin-like superfamily PhaeoP54_01699 185673186338951e19f34062e1f308e6 120 TIGRFAM TIGR00365 TIGR00365: monothiol glutaredoxin, Grx4 family 5 101 3.5E-44 T 14-10-2018 IPR004480 Monothiol glutaredoxin-related PhaeoP54_01699 185673186338951e19f34062e1f308e6 120 Pfam PF00462 Glutaredoxin 17 81 6.3E-19 T 14-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 PhaeoP54_01699 185673186338951e19f34062e1f308e6 120 Gene3D G3DSA:3.40.30.10 7 103 4.4E-32 T 14-10-2018 PhaeoP54_02004 113a9db0a93dd72bbd8e96434d9da66b 190 SUPERFAMILY SSF51316 8 109 9.0E-7 T 14-10-2018 IPR011057 Mss4-like superfamily PhaeoP54_04038 1ab29ab7974c7e20aeda416cf68d73ea 336 Gene3D G3DSA:3.40.50.720 1 332 1.1E-92 T 14-10-2018 PhaeoP54_04038 1ab29ab7974c7e20aeda416cf68d73ea 336 PRINTS PR01713 Nucleotide sugar epimerase signature 217 232 3.6E-22 T 14-10-2018 PhaeoP54_04038 1ab29ab7974c7e20aeda416cf68d73ea 336 PRINTS PR01713 Nucleotide sugar epimerase signature 30 46 3.6E-22 T 14-10-2018 PhaeoP54_04038 1ab29ab7974c7e20aeda416cf68d73ea 336 PRINTS PR01713 Nucleotide sugar epimerase signature 293 310 3.6E-22 T 14-10-2018 PhaeoP54_04038 1ab29ab7974c7e20aeda416cf68d73ea 336 PRINTS PR01713 Nucleotide sugar epimerase signature 254 269 3.6E-22 T 14-10-2018 PhaeoP54_04038 1ab29ab7974c7e20aeda416cf68d73ea 336 Pfam PF16363 GDP-mannose 4,6 dehydratase 5 322 7.8E-53 T 14-10-2018 IPR016040 NAD(P)-binding domain PhaeoP54_04038 1ab29ab7974c7e20aeda416cf68d73ea 336 SUPERFAMILY SSF51735 1 331 1.99E-88 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PhaeoP54_00913 edea2854807909f91f6e82187eaca435 598 SMART SM00065 265 404 0.0031 T 14-10-2018 IPR003018 GAF domain GO:0005515 PhaeoP54_00913 edea2854807909f91f6e82187eaca435 598 SUPERFAMILY SSF55073 412 570 1.57E-44 T 14-10-2018 IPR029787 Nucleotide cyclase PhaeoP54_00913 edea2854807909f91f6e82187eaca435 598 SMART SM00267 396 569 3.5E-59 T 14-10-2018 IPR000160 GGDEF domain PhaeoP54_00913 edea2854807909f91f6e82187eaca435 598 Gene3D G3DSA:3.30.450.40 241 403 2.5E-12 T 14-10-2018 IPR029016 GAF-like domain superfamily PhaeoP54_00913 edea2854807909f91f6e82187eaca435 598 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 404 569 8.2E-50 T 14-10-2018 IPR000160 GGDEF domain PhaeoP54_00913 edea2854807909f91f6e82187eaca435 598 Gene3D G3DSA:3.30.70.270 404 575 3.6E-54 T 14-10-2018 PhaeoP54_00913 edea2854807909f91f6e82187eaca435 598 SUPERFAMILY SSF55781 247 403 7.41E-12 T 14-10-2018 PhaeoP54_00913 edea2854807909f91f6e82187eaca435 598 Pfam PF00990 Diguanylate cyclase, GGDEF domain 408 565 1.9E-43 T 14-10-2018 IPR000160 GGDEF domain PhaeoP54_03037 aae3f423318e9301603ba6297fc71d3a 104 SMART SM01403 7 101 8.5E-58 T 14-10-2018 IPR027486 Ribosomal protein S10 domain PhaeoP54_03037 aae3f423318e9301603ba6297fc71d3a 104 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 26.937 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PhaeoP54_03037 aae3f423318e9301603ba6297fc71d3a 104 Pfam PF00338 Ribosomal protein S10p/S20e 7 101 1.7E-36 T 14-10-2018 IPR027486 Ribosomal protein S10 domain PhaeoP54_03037 aae3f423318e9301603ba6297fc71d3a 104 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 2.8E-17 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PhaeoP54_03037 aae3f423318e9301603ba6297fc71d3a 104 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 2.8E-17 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PhaeoP54_03037 aae3f423318e9301603ba6297fc71d3a 104 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 2.8E-17 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PhaeoP54_03037 aae3f423318e9301603ba6297fc71d3a 104 SUPERFAMILY SSF54999 6 102 6.41E-39 T 14-10-2018 IPR036838 Ribosomal protein S10 domain superfamily PhaeoP54_03037 aae3f423318e9301603ba6297fc71d3a 104 Gene3D G3DSA:3.30.70.600 1 103 1.7E-38 T 14-10-2018 IPR036838 Ribosomal protein S10 domain superfamily PhaeoP54_03037 aae3f423318e9301603ba6297fc71d3a 104 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 3.3E-46 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PhaeoP54_03113 01b304ebcbceb01e78cfd3f6286a253b 351 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 218 231 - T 14-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 PhaeoP54_03113 01b304ebcbceb01e78cfd3f6286a253b 351 Gene3D G3DSA:3.40.640.10 76 266 4.9E-40 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PhaeoP54_03113 01b304ebcbceb01e78cfd3f6286a253b 351 Pfam PF00155 Aminotransferase class I and II 170 318 1.6E-16 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 PhaeoP54_03113 01b304ebcbceb01e78cfd3f6286a253b 351 Gene3D G3DSA:3.90.1150.10 64 351 4.9E-40 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 PhaeoP54_03113 01b304ebcbceb01e78cfd3f6286a253b 351 SUPERFAMILY SSF53383 62 351 8.39E-44 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PhaeoP54_00127 c6789d726c6e626d7c324e8f67ed48fd 394 Gene3D G3DSA:3.40.50.2300 36 361 5.0E-123 T 14-10-2018 PhaeoP54_00127 c6789d726c6e626d7c324e8f67ed48fd 394 Gene3D G3DSA:3.40.50.2300 148 368 5.0E-123 T 14-10-2018 PhaeoP54_00127 c6789d726c6e626d7c324e8f67ed48fd 394 Pfam PF13458 Periplasmic binding protein 27 366 2.7E-54 T 14-10-2018 IPR028081 Leucine-binding protein domain PhaeoP54_00127 c6789d726c6e626d7c324e8f67ed48fd 394 SUPERFAMILY SSF53822 27 388 9.08E-70 T 14-10-2018 IPR028082 Periplasmic binding protein-like I PhaeoP54_02128 ea7b2f2db299b3af23b39617aebeea3b 545 ProSitePatterns PS00211 ABC transporters family signature. 420 434 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PhaeoP54_02128 ea7b2f2db299b3af23b39617aebeea3b 545 Pfam PF00005 ABC transporter 31 188 8.8E-22 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PhaeoP54_02128 ea7b2f2db299b3af23b39617aebeea3b 545 Pfam PF00005 ABC transporter 296 448 1.4E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PhaeoP54_02128 ea7b2f2db299b3af23b39617aebeea3b 545 SMART SM00382 305 497 4.5E-18 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_02128 ea7b2f2db299b3af23b39617aebeea3b 545 SMART SM00382 39 238 6.2E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_02128 ea7b2f2db299b3af23b39617aebeea3b 545 SUPERFAMILY SSF52540 270 527 3.2E-62 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_02128 ea7b2f2db299b3af23b39617aebeea3b 545 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 503 532 0.067 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 PhaeoP54_02128 ea7b2f2db299b3af23b39617aebeea3b 545 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 240 272 0.0062 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 PhaeoP54_02128 ea7b2f2db299b3af23b39617aebeea3b 545 Gene3D G3DSA:3.40.50.300 277 542 1.7E-75 T 14-10-2018 PhaeoP54_02128 ea7b2f2db299b3af23b39617aebeea3b 545 Gene3D G3DSA:3.40.50.300 5 276 9.3E-68 T 14-10-2018 PhaeoP54_02128 ea7b2f2db299b3af23b39617aebeea3b 545 SUPERFAMILY SSF52540 24 260 1.12E-51 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_02218 3166262ff0cd7251da2061f61572da8f 746 Gene3D G3DSA:3.20.20.60 409 745 2.8E-90 T 14-10-2018 PhaeoP54_02218 3166262ff0cd7251da2061f61572da8f 746 Gene3D G3DSA:3.50.30.10 185 408 3.4E-49 T 14-10-2018 PhaeoP54_02218 3166262ff0cd7251da2061f61572da8f 746 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 427 715 3.2E-84 T 14-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 PhaeoP54_02218 3166262ff0cd7251da2061f61572da8f 746 SUPERFAMILY SSF55781 10 158 6.76E-26 T 14-10-2018 PhaeoP54_02218 3166262ff0cd7251da2061f61572da8f 746 Pfam PF13185 GAF domain 30 159 2.0E-12 T 14-10-2018 IPR003018 GAF domain GO:0005515 PhaeoP54_02218 3166262ff0cd7251da2061f61572da8f 746 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 639 654 9.1E-14 T 14-10-2018 PhaeoP54_02218 3166262ff0cd7251da2061f61572da8f 746 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 622 637 9.1E-14 T 14-10-2018 PhaeoP54_02218 3166262ff0cd7251da2061f61572da8f 746 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 468 487 9.1E-14 T 14-10-2018 PhaeoP54_02218 3166262ff0cd7251da2061f61572da8f 746 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 675 687 9.1E-14 T 14-10-2018 PhaeoP54_02218 3166262ff0cd7251da2061f61572da8f 746 SUPERFAMILY SSF52009 301 419 4.45E-29 T 14-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 PhaeoP54_02218 3166262ff0cd7251da2061f61572da8f 746 SMART SM00065 25 171 8.8E-12 T 14-10-2018 IPR003018 GAF domain GO:0005515 PhaeoP54_02218 3166262ff0cd7251da2061f61572da8f 746 Pfam PF05524 PEP-utilising enzyme, N-terminal 184 302 3.3E-19 T 14-10-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 PhaeoP54_02218 3166262ff0cd7251da2061f61572da8f 746 SUPERFAMILY SSF47831 200 319 8.5E-27 T 14-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 PhaeoP54_02218 3166262ff0cd7251da2061f61572da8f 746 Gene3D G3DSA:3.30.450.40 7 163 5.8E-35 T 14-10-2018 IPR029016 GAF-like domain superfamily PhaeoP54_02218 3166262ff0cd7251da2061f61572da8f 746 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 199 725 5.0E-118 T 14-10-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 PhaeoP54_02218 3166262ff0cd7251da2061f61572da8f 746 SUPERFAMILY SSF51621 425 723 1.98E-85 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 PhaeoP54_02218 3166262ff0cd7251da2061f61572da8f 746 Pfam PF00391 PEP-utilising enzyme, mobile domain 328 400 3.9E-17 T 14-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 PhaeoP54_02218 3166262ff0cd7251da2061f61572da8f 746 Gene3D G3DSA:1.10.274.10 202 322 3.4E-49 T 14-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 PhaeoP54_03301 6ebfd03f619fb478885a72811f8e115b 729 SUPERFAMILY SSF52518 29 356 1.35E-55 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold PhaeoP54_03301 6ebfd03f619fb478885a72811f8e115b 729 Pfam PF00676 Dehydrogenase E1 component 40 350 2.9E-24 T 14-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 PhaeoP54_03301 6ebfd03f619fb478885a72811f8e115b 729 SUPERFAMILY SSF52922 596 724 4.97E-26 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 PhaeoP54_03301 6ebfd03f619fb478885a72811f8e115b 729 Gene3D G3DSA:3.40.50.970 5 367 5.1E-59 T 14-10-2018 PhaeoP54_03301 6ebfd03f619fb478885a72811f8e115b 729 Gene3D G3DSA:3.40.50.970 393 582 1.6E-57 T 14-10-2018 PhaeoP54_03301 6ebfd03f619fb478885a72811f8e115b 729 SUPERFAMILY SSF52518 395 583 7.57E-49 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold PhaeoP54_03301 6ebfd03f619fb478885a72811f8e115b 729 Pfam PF02780 Transketolase, C-terminal domain 600 717 9.5E-18 T 14-10-2018 IPR033248 Transketolase, C-terminal domain PhaeoP54_03301 6ebfd03f619fb478885a72811f8e115b 729 Pfam PF02779 Transketolase, pyrimidine binding domain 396 574 4.6E-26 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain PhaeoP54_03301 6ebfd03f619fb478885a72811f8e115b 729 SMART SM00861 394 575 4.4E-44 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain PhaeoP54_03301 6ebfd03f619fb478885a72811f8e115b 729 Gene3D G3DSA:3.40.50.920 600 727 4.3E-23 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 PhaeoP54_01811 5b03ef16f05f9c6ac8260f33b25cddc9 465 Pfam PF00557 Metallopeptidase family M24 230 443 1.8E-20 T 14-10-2018 IPR000994 Peptidase M24 PhaeoP54_01811 5b03ef16f05f9c6ac8260f33b25cddc9 465 SUPERFAMILY SSF53092 71 219 5.23E-7 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal PhaeoP54_01811 5b03ef16f05f9c6ac8260f33b25cddc9 465 Pfam PF01321 Creatinase/Prolidase N-terminal domain 74 221 5.1E-8 T 14-10-2018 IPR000587 Creatinase, N-terminal GO:0016787 PhaeoP54_01811 5b03ef16f05f9c6ac8260f33b25cddc9 465 Gene3D G3DSA:3.90.230.10 223 462 4.4E-53 T 14-10-2018 PhaeoP54_01811 5b03ef16f05f9c6ac8260f33b25cddc9 465 SUPERFAMILY SSF55920 220 458 8.24E-39 T 14-10-2018 IPR036005 Creatinase/aminopeptidase-like PhaeoP54_01811 5b03ef16f05f9c6ac8260f33b25cddc9 465 Gene3D G3DSA:3.40.350.10 16 222 7.8E-87 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal PhaeoP54_00560 c691adc7b7f40ecbdcd365ec7f105d64 128 Gene3D G3DSA:3.10.129.10 1 128 9.9E-45 T 14-10-2018 PhaeoP54_00560 c691adc7b7f40ecbdcd365ec7f105d64 128 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 6 120 3.3E-34 T 14-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 PhaeoP54_00560 c691adc7b7f40ecbdcd365ec7f105d64 128 SUPERFAMILY SSF54637 1 128 1.79E-43 T 14-10-2018 IPR029069 HotDog domain superfamily PhaeoP54_00560 c691adc7b7f40ecbdcd365ec7f105d64 128 TIGRFAM TIGR02799 thio_ybgC: tol-pal system-associated acyl-CoA thioesterase 3 126 4.8E-51 T 14-10-2018 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase GO:0016790 PhaeoP54_00560 c691adc7b7f40ecbdcd365ec7f105d64 128 Pfam PF03061 Thioesterase superfamily 17 100 1.3E-18 T 14-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 PhaeoP54_00560 c691adc7b7f40ecbdcd365ec7f105d64 128 ProSitePatterns PS01328 4-hydroxybenzoyl-CoA thioesterase family active site. 8 25 - T 14-10-2018 IPR008272 4-hydroxybenzoyl-CoA thioesterase, active site GO:0016787 PhaeoP54_00560 c691adc7b7f40ecbdcd365ec7f105d64 128 PIRSF PIRSF003230 1 128 3.6E-45 T 14-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 PhaeoP54_00023 8b54f5b9b01c51e8e7b22d62864540d0 429 PIRSF PIRSF006066 1 429 9.8E-103 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 PhaeoP54_00023 8b54f5b9b01c51e8e7b22d62864540d0 429 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 7 419 1.8E-76 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit PhaeoP54_00023 8b54f5b9b01c51e8e7b22d62864540d0 429 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 44 424 7.8E-91 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 PhaeoP54_01858 7861ef0ca3a7081bc809899bc113fd53 375 Gene3D G3DSA:1.20.120.1460 302 371 1.4E-21 T 14-10-2018 PhaeoP54_01858 7861ef0ca3a7081bc809899bc113fd53 375 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 137 155 - T 14-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 PhaeoP54_01858 7861ef0ca3a7081bc809899bc113fd53 375 Hamap MF_02041 tRNA-dihydrouridine(20/20a) synthase [dusA]. 50 372 48.464 T 14-10-2018 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 PhaeoP54_01858 7861ef0ca3a7081bc809899bc113fd53 375 SUPERFAMILY SSF51395 55 351 1.26E-70 T 14-10-2018 PhaeoP54_01858 7861ef0ca3a7081bc809899bc113fd53 375 TIGRFAM TIGR00742 yjbN: tRNA dihydrouridine synthase A 55 370 1.2E-123 T 14-10-2018 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 PhaeoP54_01858 7861ef0ca3a7081bc809899bc113fd53 375 Pfam PF01207 Dihydrouridine synthase (Dus) 58 369 5.0E-80 T 14-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 PhaeoP54_01858 7861ef0ca3a7081bc809899bc113fd53 375 PIRSF PIRSF006621 46 371 7.0E-71 T 14-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 PhaeoP54_01858 7861ef0ca3a7081bc809899bc113fd53 375 Gene3D G3DSA:3.20.20.70 53 292 5.5E-73 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PhaeoP54_03357 6bd467ebd3017e16fd4e88770e883c35 688 Gene3D G3DSA:3.40.50.261 130 290 5.8E-35 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 PhaeoP54_03357 6bd467ebd3017e16fd4e88770e883c35 688 Pfam PF13380 CoA binding domain 12 134 1.7E-15 T 14-10-2018 IPR003781 CoA-binding GO:0048037 PhaeoP54_03357 6bd467ebd3017e16fd4e88770e883c35 688 Gene3D G3DSA:3.30.470.20 484 679 2.1E-46 T 14-10-2018 PhaeoP54_03357 6bd467ebd3017e16fd4e88770e883c35 688 Gene3D G3DSA:3.40.50.261 294 459 1.4E-11 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 PhaeoP54_03357 6bd467ebd3017e16fd4e88770e883c35 688 SUPERFAMILY SSF51735 4 137 5.47E-24 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PhaeoP54_03357 6bd467ebd3017e16fd4e88770e883c35 688 SUPERFAMILY SSF56059 481 680 6.86E-25 T 14-10-2018 PhaeoP54_03357 6bd467ebd3017e16fd4e88770e883c35 688 Pfam PF13607 Succinyl-CoA ligase like flavodoxin domain 155 289 1.0E-33 T 14-10-2018 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain PhaeoP54_03357 6bd467ebd3017e16fd4e88770e883c35 688 SUPERFAMILY SSF52210 296 457 1.96E-23 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 PhaeoP54_03357 6bd467ebd3017e16fd4e88770e883c35 688 SMART SM00881 8 99 2.3E-20 T 14-10-2018 IPR003781 CoA-binding GO:0048037 PhaeoP54_03357 6bd467ebd3017e16fd4e88770e883c35 688 Gene3D G3DSA:3.30.1490.20 497 564 2.1E-46 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 PhaeoP54_03357 6bd467ebd3017e16fd4e88770e883c35 688 SUPERFAMILY SSF52210 131 290 8.9E-31 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 PhaeoP54_03357 6bd467ebd3017e16fd4e88770e883c35 688 Pfam PF13549 ATP-grasp domain 483 680 4.7E-33 T 14-10-2018 PhaeoP54_03357 6bd467ebd3017e16fd4e88770e883c35 688 Gene3D G3DSA:3.40.50.720 3 129 2.3E-26 T 14-10-2018 PhaeoP54_00586 a66db23c61c35c428e5c9efd713ef7e0 286 Pfam PF16976 Flp pilus assembly protein RcpC/CpaB 125 230 1.8E-25 T 14-10-2018 IPR031571 Flp pilus assembly protein RcpC/CpaB domain PhaeoP54_00586 a66db23c61c35c428e5c9efd713ef7e0 286 SMART SM00858 48 117 1.2E-4 T 14-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 PhaeoP54_00586 a66db23c61c35c428e5c9efd713ef7e0 286 TIGRFAM TIGR03177 pilus_cpaB: Flp pilus assembly protein CpaB 7 278 1.2E-67 T 14-10-2018 IPR017592 Pilus assembly, Flp-type CpaB PhaeoP54_03202 c237eedada92986222b452b5dcda2b3b 633 Gene3D G3DSA:3.40.50.2300 518 631 4.4E-19 T 14-10-2018 PhaeoP54_03202 c237eedada92986222b452b5dcda2b3b 633 SUPERFAMILY SSF47384 288 356 3.14E-5 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 PhaeoP54_03202 c237eedada92986222b452b5dcda2b3b 633 Gene3D G3DSA:3.30.565.10 360 507 5.4E-35 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PhaeoP54_03202 c237eedada92986222b452b5dcda2b3b 633 Pfam PF00072 Response regulator receiver domain 520 627 3.7E-9 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PhaeoP54_03202 c237eedada92986222b452b5dcda2b3b 633 SUPERFAMILY SSF55874 367 507 1.83E-28 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PhaeoP54_03202 c237eedada92986222b452b5dcda2b3b 633 Pfam PF08448 PAS fold 186 282 3.3E-6 T 14-10-2018 IPR013656 PAS fold-4 PhaeoP54_03202 c237eedada92986222b452b5dcda2b3b 633 SMART SM00387 403 510 6.1E-24 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PhaeoP54_03202 c237eedada92986222b452b5dcda2b3b 633 PRINTS PR00344 Bacterial sensor protein C-terminal signature 459 469 1.8E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PhaeoP54_03202 c237eedada92986222b452b5dcda2b3b 633 PRINTS PR00344 Bacterial sensor protein C-terminal signature 471 489 1.8E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PhaeoP54_03202 c237eedada92986222b452b5dcda2b3b 633 PRINTS PR00344 Bacterial sensor protein C-terminal signature 441 455 1.8E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PhaeoP54_03202 c237eedada92986222b452b5dcda2b3b 633 PRINTS PR00344 Bacterial sensor protein C-terminal signature 494 507 1.8E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PhaeoP54_03202 c237eedada92986222b452b5dcda2b3b 633 SUPERFAMILY SSF52172 520 628 1.85E-15 T 14-10-2018 IPR011006 CheY-like superfamily PhaeoP54_03202 c237eedada92986222b452b5dcda2b3b 633 SMART SM00448 517 627 4.5E-9 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PhaeoP54_03202 c237eedada92986222b452b5dcda2b3b 633 Pfam PF12860 PAS fold 16 131 1.2E-36 T 14-10-2018 PhaeoP54_03202 c237eedada92986222b452b5dcda2b3b 633 SUPERFAMILY SSF55785 162 280 5.41E-12 T 14-10-2018 IPR035965 PAS domain superfamily PhaeoP54_03202 c237eedada92986222b452b5dcda2b3b 633 Gene3D G3DSA:1.10.287.130 302 359 5.4E-35 T 14-10-2018 PhaeoP54_03202 c237eedada92986222b452b5dcda2b3b 633 Gene3D G3DSA:3.30.450.20 3 131 3.7E-6 T 14-10-2018 PhaeoP54_03202 c237eedada92986222b452b5dcda2b3b 633 Gene3D G3DSA:3.30.450.20 168 299 4.2E-14 T 14-10-2018 PhaeoP54_03202 c237eedada92986222b452b5dcda2b3b 633 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 404 508 1.8E-13 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PhaeoP54_01053 e801a1a729a038823c93032a1e4dbf83 187 Pfam PF09965 Uncharacterized protein conserved in bacteria (DUF2199) 14 163 2.6E-41 T 14-10-2018 IPR018697 Protein of unknown function DUF2199 PhaeoP54_03566 a218d7f640cb05784114b89f03f0b971 282 Pfam PF03641 Possible lysine decarboxylase 135 263 4.5E-33 T 14-10-2018 IPR031100 LOG family PhaeoP54_03566 a218d7f640cb05784114b89f03f0b971 282 SUPERFAMILY SSF102405 39 265 1.07E-54 T 14-10-2018 PhaeoP54_03566 a218d7f640cb05784114b89f03f0b971 282 Gene3D G3DSA:3.40.50.450 47 270 2.7E-59 T 14-10-2018 PhaeoP54_03566 a218d7f640cb05784114b89f03f0b971 282 TIGRFAM TIGR00730 TIGR00730: TIGR00730 family protein 125 267 1.9E-29 T 14-10-2018 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG PhaeoP54_00584 75f47c00bdf168c47706502cac9b1da9 208 SUPERFAMILY SSF103088 52 161 4.71E-30 T 14-10-2018 IPR036737 OmpA-like domain superfamily PhaeoP54_00584 75f47c00bdf168c47706502cac9b1da9 208 Pfam PF00691 OmpA family 64 158 1.6E-20 T 14-10-2018 IPR006665 OmpA-like domain PhaeoP54_00584 75f47c00bdf168c47706502cac9b1da9 208 PRINTS PR01021 OMPA domain signature 95 110 3.6E-13 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 PhaeoP54_00584 75f47c00bdf168c47706502cac9b1da9 208 PRINTS PR01021 OMPA domain signature 65 87 3.6E-13 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 PhaeoP54_00584 75f47c00bdf168c47706502cac9b1da9 208 PRINTS PR01021 OMPA domain signature 110 126 3.6E-13 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 PhaeoP54_00584 75f47c00bdf168c47706502cac9b1da9 208 Gene3D G3DSA:3.30.1330.60 35 162 1.6E-29 T 14-10-2018 IPR036737 OmpA-like domain superfamily PhaeoP54_03203 9e07fcf17d6e8abb0c4d711335cbb9ef 234 Pfam PF00072 Response regulator receiver domain 6 115 1.1E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PhaeoP54_03203 9e07fcf17d6e8abb0c4d711335cbb9ef 234 SMART SM00448 4 114 5.7E-31 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PhaeoP54_03203 9e07fcf17d6e8abb0c4d711335cbb9ef 234 SUPERFAMILY SSF46894 124 228 4.82E-18 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PhaeoP54_03203 9e07fcf17d6e8abb0c4d711335cbb9ef 234 Pfam PF00486 Transcriptional regulatory protein, C terminal 153 227 6.1E-17 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PhaeoP54_03203 9e07fcf17d6e8abb0c4d711335cbb9ef 234 Gene3D G3DSA:1.10.10.10 129 232 6.0E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_03203 9e07fcf17d6e8abb0c4d711335cbb9ef 234 Gene3D G3DSA:3.40.50.2300 1 128 1.4E-29 T 14-10-2018 PhaeoP54_03203 9e07fcf17d6e8abb0c4d711335cbb9ef 234 SUPERFAMILY SSF52172 2 121 1.39E-30 T 14-10-2018 IPR011006 CheY-like superfamily PhaeoP54_03203 9e07fcf17d6e8abb0c4d711335cbb9ef 234 SMART SM00862 151 227 3.4E-19 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PhaeoP54_01390 dbd94bacab91eeabfcb86c82669dfa34 375 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 19 366 4.0E-107 T 14-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 PhaeoP54_01390 dbd94bacab91eeabfcb86c82669dfa34 375 Gene3D G3DSA:3.40.50.1970 2 179 2.0E-61 T 14-10-2018 PhaeoP54_01390 dbd94bacab91eeabfcb86c82669dfa34 375 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 7 368 68.682 T 14-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 PhaeoP54_01390 dbd94bacab91eeabfcb86c82669dfa34 375 PIRSF PIRSF001455 11 371 1.2E-96 T 14-10-2018 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 PhaeoP54_01390 dbd94bacab91eeabfcb86c82669dfa34 375 SUPERFAMILY SSF56796 10 369 5.63E-108 T 14-10-2018 PhaeoP54_01390 dbd94bacab91eeabfcb86c82669dfa34 375 Gene3D G3DSA:1.20.1090.10 180 373 4.3E-55 T 14-10-2018 PhaeoP54_01390 dbd94bacab91eeabfcb86c82669dfa34 375 Pfam PF01761 3-dehydroquinate synthase 75 337 1.3E-96 T 14-10-2018 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 PhaeoP54_00507 1ea3bd820409f4f424e276dbee291c35 2162 Pfam PF00698 Acyl transferase domain 546 818 7.1E-45 T 14-10-2018 IPR014043 Acyl transferase PhaeoP54_00507 1ea3bd820409f4f424e276dbee291c35 2162 SMART SM00824 Thioesterase 1898 2145 3.2E-4 T 14-10-2018 IPR020802 Polyketide synthase, thioesterase domain GO:0009058|GO:0016788 PhaeoP54_00507 1ea3bd820409f4f424e276dbee291c35 2162 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 1181 1384 1.5E-38 T 14-10-2018 PhaeoP54_00507 1ea3bd820409f4f424e276dbee291c35 2162 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 400 502 4.8E-15 T 14-10-2018 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 PhaeoP54_00507 1ea3bd820409f4f424e276dbee291c35 2162 SUPERFAMILY SSF52151 545 827 1.02E-59 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase PhaeoP54_00507 1ea3bd820409f4f424e276dbee291c35 2162 Gene3D G3DSA:3.40.366.10 544 846 1.2E-128 T 14-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 PhaeoP54_00507 1ea3bd820409f4f424e276dbee291c35 2162 Pfam PF08659 KR domain 1181 1383 3.4E-44 T 14-10-2018 IPR013968 Polyketide synthase, ketoreductase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 PhaeoP54_00507 1ea3bd820409f4f424e276dbee291c35 2162 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 280 397 1.7E-39 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal PhaeoP54_00507 1ea3bd820409f4f424e276dbee291c35 2162 Gene3D G3DSA:3.30.70.3290 469 875 1.2E-128 T 14-10-2018 PhaeoP54_00507 1ea3bd820409f4f424e276dbee291c35 2162 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 548 845 1.4E-84 T 14-10-2018 IPR020801 Polyketide synthase, acyl transferase domain PhaeoP54_00507 1ea3bd820409f4f424e276dbee291c35 2162 Pfam PF00975 Thioesterase domain 1897 2010 1.0E-16 T 14-10-2018 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 PhaeoP54_00507 1ea3bd820409f4f424e276dbee291c35 2162 Gene3D G3DSA:3.30.70.250 677 739 1.2E-128 T 14-10-2018 PhaeoP54_00507 1ea3bd820409f4f424e276dbee291c35 2162 SUPERFAMILY SSF47336 1780 1853 4.45E-19 T 14-10-2018 IPR036736 ACP-like superfamily PhaeoP54_00507 1ea3bd820409f4f424e276dbee291c35 2162 SUPERFAMILY SSF55048 676 734 1.44E-5 T 14-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding PhaeoP54_00507 1ea3bd820409f4f424e276dbee291c35 2162 Pfam PF14765 Polyketide synthase dehydratase 1408 1681 2.7E-41 T 14-10-2018 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 PhaeoP54_00507 1ea3bd820409f4f424e276dbee291c35 2162 Gene3D G3DSA:3.40.50.1820 1883 2151 1.5E-52 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold PhaeoP54_00507 1ea3bd820409f4f424e276dbee291c35 2162 SUPERFAMILY SSF53474 1875 2145 1.1E-50 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold PhaeoP54_00507 1ea3bd820409f4f424e276dbee291c35 2162 Gene3D G3DSA:1.10.1200.10 1775 1857 3.8E-24 T 14-10-2018 IPR036736 ACP-like superfamily PhaeoP54_00507 1ea3bd820409f4f424e276dbee291c35 2162 SMART SM00825 Beta-ketoacyl synthase 22 450 2.0E-170 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain PhaeoP54_00507 1ea3bd820409f4f424e276dbee291c35 2162 Gene3D G3DSA:3.40.47.10 12 468 6.0E-160 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 PhaeoP54_00507 1ea3bd820409f4f424e276dbee291c35 2162 SUPERFAMILY SSF51735 916 1164 1.85E-14 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PhaeoP54_00507 1ea3bd820409f4f424e276dbee291c35 2162 Gene3D G3DSA:3.40.50.720 891 1409 1.4E-87 T 14-10-2018 PhaeoP54_00507 1ea3bd820409f4f424e276dbee291c35 2162 Pfam PF00550 Phosphopantetheine attachment site 1790 1853 3.5E-13 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain PhaeoP54_00507 1ea3bd820409f4f424e276dbee291c35 2162 SMART SM00823 Phosphopantetheine attachment site 1788 1857 1.1E-10 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 PhaeoP54_00507 1ea3bd820409f4f424e276dbee291c35 2162 SUPERFAMILY SSF51735 1177 1390 3.64E-32 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PhaeoP54_00507 1ea3bd820409f4f424e276dbee291c35 2162 SMART SM00826 1407 1569 3.3E-7 T 14-10-2018 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 PhaeoP54_00507 1ea3bd820409f4f424e276dbee291c35 2162 SUPERFAMILY SSF53901 18 446 1.1E-81 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 PhaeoP54_00507 1ea3bd820409f4f424e276dbee291c35 2162 Gene3D G3DSA:3.10.129.110 1421 1679 7.9E-45 T 14-10-2018 PhaeoP54_00507 1ea3bd820409f4f424e276dbee291c35 2162 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 184 200 - T 14-10-2018 IPR018201 Beta-ketoacyl synthase, active site PhaeoP54_00507 1ea3bd820409f4f424e276dbee291c35 2162 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 21 271 1.8E-66 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal PhaeoP54_01552 40943e5e5b008806fef6dc19e7e57bf7 264 Gene3D G3DSA:1.10.10.10 4 86 5.7E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_01552 40943e5e5b008806fef6dc19e7e57bf7 264 Pfam PF09339 IclR helix-turn-helix domain 20 71 3.3E-17 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 PhaeoP54_01552 40943e5e5b008806fef6dc19e7e57bf7 264 SMART SM00346 18 108 1.6E-28 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 PhaeoP54_01552 40943e5e5b008806fef6dc19e7e57bf7 264 SUPERFAMILY SSF55781 84 263 7.85E-31 T 14-10-2018 PhaeoP54_01552 40943e5e5b008806fef6dc19e7e57bf7 264 Pfam PF01614 Bacterial transcriptional regulator 139 261 1.9E-10 T 14-10-2018 IPR014757 Transcription regulator IclR, C-terminal PhaeoP54_01552 40943e5e5b008806fef6dc19e7e57bf7 264 Gene3D G3DSA:3.30.450.40 92 262 1.1E-25 T 14-10-2018 IPR029016 GAF-like domain superfamily PhaeoP54_01552 40943e5e5b008806fef6dc19e7e57bf7 264 SUPERFAMILY SSF46785 18 90 5.84E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_01188 eab058572b60f20de3dc9e38152b341e 593 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 461 588 2.2E-36 T 14-10-2018 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain PhaeoP54_01188 eab058572b60f20de3dc9e38152b341e 593 Gene3D G3DSA:2.40.110.10 159 279 3.0E-95 T 14-10-2018 PhaeoP54_01188 eab058572b60f20de3dc9e38152b341e 593 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 78 155 7.9E-14 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 PhaeoP54_01188 eab058572b60f20de3dc9e38152b341e 593 SUPERFAMILY SSF56645 38 290 1.01E-56 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 PhaeoP54_01188 eab058572b60f20de3dc9e38152b341e 593 Gene3D G3DSA:1.20.140.10 280 443 3.0E-95 T 14-10-2018 PhaeoP54_01188 eab058572b60f20de3dc9e38152b341e 593 SUPERFAMILY SSF47203 285 469 6.12E-50 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 PhaeoP54_01188 eab058572b60f20de3dc9e38152b341e 593 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 281 445 1.3E-18 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PhaeoP54_01188 eab058572b60f20de3dc9e38152b341e 593 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 161 269 6.5E-17 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 PhaeoP54_01188 eab058572b60f20de3dc9e38152b341e 593 Pfam PF12418 Acyl-CoA dehydrogenase N terminal 3 33 5.1E-6 T 14-10-2018 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria PhaeoP54_01188 eab058572b60f20de3dc9e38152b341e 593 Gene3D G3DSA:1.10.540.10 48 158 3.0E-95 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 PhaeoP54_01207 93a2684fb52eba740eb17cac72aea9f2 953 Pfam PF04039 Domain related to MnhB subunit of Na+/H+ antiporter 794 916 1.9E-34 T 14-10-2018 IPR007182 Na+/H+ antiporter MnhB subunit-related protein PhaeoP54_01207 93a2684fb52eba740eb17cac72aea9f2 953 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 238 264 2.9E-35 T 14-10-2018 PhaeoP54_01207 93a2684fb52eba740eb17cac72aea9f2 953 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 414 433 2.9E-35 T 14-10-2018 PhaeoP54_01207 93a2684fb52eba740eb17cac72aea9f2 953 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 216 237 2.9E-35 T 14-10-2018 PhaeoP54_01207 93a2684fb52eba740eb17cac72aea9f2 953 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 103 123 2.9E-35 T 14-10-2018 PhaeoP54_01207 93a2684fb52eba740eb17cac72aea9f2 953 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 306 318 2.9E-35 T 14-10-2018 PhaeoP54_01207 93a2684fb52eba740eb17cac72aea9f2 953 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 75 100 2.9E-35 T 14-10-2018 PhaeoP54_01207 93a2684fb52eba740eb17cac72aea9f2 953 Pfam PF13244 Domain of unknown function (DUF4040) 610 674 1.7E-19 T 14-10-2018 IPR025383 Domain of unknown function DUF4040 PhaeoP54_01207 93a2684fb52eba740eb17cac72aea9f2 953 Pfam PF00361 Proton-conducting membrane transporter 126 403 5.2E-68 T 14-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PhaeoP54_01207 93a2684fb52eba740eb17cac72aea9f2 953 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 60 113 4.4E-8 T 14-10-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PhaeoP54_00811 bbbcb793bb3afc178280bfb8ca56b6d1 491 SUPERFAMILY SSF48179 185 269 3.97E-12 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 PhaeoP54_00811 bbbcb793bb3afc178280bfb8ca56b6d1 491 Hamap MF_02129 L-carnitine dehydrogenase [lcdH]. 3 314 53.676 T 14-10-2018 IPR026578 L-carnitine dehydrogenase MetaCyc: PWY-3602|MetaCyc: PWY-7472 PhaeoP54_00811 bbbcb793bb3afc178280bfb8ca56b6d1 491 Pfam PF13279 Thioesterase-like superfamily 351 459 4.8E-14 T 14-10-2018 PhaeoP54_00811 bbbcb793bb3afc178280bfb8ca56b6d1 491 SUPERFAMILY SSF54637 343 490 1.16E-39 T 14-10-2018 IPR029069 HotDog domain superfamily PhaeoP54_00811 bbbcb793bb3afc178280bfb8ca56b6d1 491 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 185 251 5.1E-13 T 14-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 PhaeoP54_00811 bbbcb793bb3afc178280bfb8ca56b6d1 491 Gene3D G3DSA:3.40.50.720 1 183 3.1E-45 T 14-10-2018 PhaeoP54_00811 bbbcb793bb3afc178280bfb8ca56b6d1 491 Gene3D G3DSA:1.10.1040.10 184 307 5.8E-25 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 PhaeoP54_00811 bbbcb793bb3afc178280bfb8ca56b6d1 491 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 5 178 5.5E-38 T 14-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 PhaeoP54_00811 bbbcb793bb3afc178280bfb8ca56b6d1 491 SUPERFAMILY SSF51735 2 180 3.34E-43 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PhaeoP54_00811 bbbcb793bb3afc178280bfb8ca56b6d1 491 Gene3D G3DSA:3.10.129.10 337 473 2.7E-32 T 14-10-2018 PhaeoP54_03679 7f7b22b353171330b640f36a1997dcf9 498 SUPERFAMILY SSF52540 2 246 9.32E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_03679 7f7b22b353171330b640f36a1997dcf9 498 ProSitePatterns PS00211 ABC transporters family signature. 411 425 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PhaeoP54_03679 7f7b22b353171330b640f36a1997dcf9 498 SMART SM00382 26 227 8.9E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_03679 7f7b22b353171330b640f36a1997dcf9 498 SMART SM00382 298 495 4.4E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_03679 7f7b22b353171330b640f36a1997dcf9 498 SUPERFAMILY SSF52540 274 490 1.25E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_03679 7f7b22b353171330b640f36a1997dcf9 498 Pfam PF00005 ABC transporter 18 179 4.4E-22 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PhaeoP54_03679 7f7b22b353171330b640f36a1997dcf9 498 Gene3D G3DSA:3.40.50.300 1 264 2.4E-56 T 14-10-2018 PhaeoP54_03679 7f7b22b353171330b640f36a1997dcf9 498 Gene3D G3DSA:3.40.50.300 274 494 1.5E-49 T 14-10-2018 PhaeoP54_03679 7f7b22b353171330b640f36a1997dcf9 498 Pfam PF00005 ABC transporter 289 439 6.7E-25 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PhaeoP54_02188 f6547f8ebb9119c78554988d1cf81ec0 249 Gene3D G3DSA:3.40.50.1400 98 226 1.2E-77 T 14-10-2018 PhaeoP54_02188 f6547f8ebb9119c78554988d1cf81ec0 249 Gene3D G3DSA:3.40.50.1400 15 237 1.2E-77 T 14-10-2018 PhaeoP54_02188 f6547f8ebb9119c78554988d1cf81ec0 249 SUPERFAMILY SSF53800 126 240 4.32E-17 T 14-10-2018 PhaeoP54_02188 f6547f8ebb9119c78554988d1cf81ec0 249 Pfam PF01903 CbiX 134 217 1.4E-7 T 14-10-2018 IPR002762 Cobalamin (vitamin B12) biosynthesis CbiX GO:0009236|GO:0016852 KEGG: 00860+4.99.1.3|MetaCyc: PWY-7377 PhaeoP54_02188 f6547f8ebb9119c78554988d1cf81ec0 249 SUPERFAMILY SSF53800 13 112 7.19E-11 T 14-10-2018 PhaeoP54_00221 7dd64b02626049f92dc0484ffc2253db 371 Gene3D G3DSA:3.40.50.720 176 314 1.7E-142 T 14-10-2018 PhaeoP54_00221 7dd64b02626049f92dc0484ffc2253db 371 SUPERFAMILY SSF50129 2 188 1.48E-67 T 14-10-2018 IPR011032 GroES-like superfamily PhaeoP54_00221 7dd64b02626049f92dc0484ffc2253db 371 SUPERFAMILY SSF51735 162 336 4.81E-42 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PhaeoP54_00221 7dd64b02626049f92dc0484ffc2253db 371 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 62 76 - T 14-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 PhaeoP54_00221 7dd64b02626049f92dc0484ffc2253db 371 TIGRFAM TIGR02818 adh_III_F_hyde: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 4 371 8.6E-185 T 14-10-2018 IPR014183 Alcohol dehydrogenase class III GO:0006069|GO:0008270|GO:0051903|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00680+1.1.1.284|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-1801|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396|MetaCyc: PWY-7798|Reactome: R-HSA-71384 PhaeoP54_00221 7dd64b02626049f92dc0484ffc2253db 371 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 128 3.1E-24 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 PhaeoP54_00221 7dd64b02626049f92dc0484ffc2253db 371 Gene3D G3DSA:3.90.180.10 7 366 1.7E-142 T 14-10-2018 PhaeoP54_00221 7dd64b02626049f92dc0484ffc2253db 371 SUPERFAMILY SSF50129 321 371 3.72E-12 T 14-10-2018 IPR011032 GroES-like superfamily PhaeoP54_00221 7dd64b02626049f92dc0484ffc2253db 371 Pfam PF00107 Zinc-binding dehydrogenase 199 325 1.5E-20 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 PhaeoP54_03278 73f2e04e2c8aa095f73d5fc169c01900 342 SUPERFAMILY SSF48019 217 338 1.43E-16 T 14-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 PhaeoP54_03278 73f2e04e2c8aa095f73d5fc169c01900 342 Gene3D G3DSA:1.20.272.10 214 339 7.5E-8 T 14-10-2018 PhaeoP54_03278 73f2e04e2c8aa095f73d5fc169c01900 342 Gene3D G3DSA:3.40.50.300 19 135 2.1E-6 T 14-10-2018 PhaeoP54_03480 a25289a5dfd1244b923610855b682e8f 463 SMART SM00997 224 383 1.8E-107 T 14-10-2018 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 PhaeoP54_03480 a25289a5dfd1244b923610855b682e8f 463 Hamap MF_00563 Adenosylhomocysteinase [ahcY]. 1 455 46.245 T 14-10-2018 IPR034373 Adenosylhomocysteinase GO:0004013|GO:0019510|GO:0051287 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-2408508|Reactome: R-HSA-5578997 PhaeoP54_03480 a25289a5dfd1244b923610855b682e8f 463 Pfam PF05221 S-adenosyl-L-homocysteine hydrolase 4 462 2.9E-141 T 14-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 PhaeoP54_03480 a25289a5dfd1244b923610855b682e8f 463 ProSitePatterns PS00739 S-adenosyl-L-homocysteine hydrolase signature 2. 246 263 - T 14-10-2018 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 PhaeoP54_03480 a25289a5dfd1244b923610855b682e8f 463 Pfam PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain 224 383 9.9E-81 T 14-10-2018 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 PhaeoP54_03480 a25289a5dfd1244b923610855b682e8f 463 Gene3D G3DSA:3.40.50.1480 5 463 2.7E-228 T 14-10-2018 PhaeoP54_03480 a25289a5dfd1244b923610855b682e8f 463 SUPERFAMILY SSF52283 4 463 1.08E-109 T 14-10-2018 PhaeoP54_03480 a25289a5dfd1244b923610855b682e8f 463 Gene3D G3DSA:3.40.50.720 226 383 2.7E-228 T 14-10-2018 PhaeoP54_03480 a25289a5dfd1244b923610855b682e8f 463 SUPERFAMILY SSF51735 224 383 6.86E-75 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PhaeoP54_03480 a25289a5dfd1244b923610855b682e8f 463 SMART SM00996 4 462 0.0 T 14-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 PhaeoP54_03480 a25289a5dfd1244b923610855b682e8f 463 TIGRFAM TIGR00936 ahcY: adenosylhomocysteinase 5 455 4.8E-179 T 14-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 PhaeoP54_03480 a25289a5dfd1244b923610855b682e8f 463 ProSitePatterns PS00738 S-adenosyl-L-homocysteine hydrolase signature 1. 76 90 - T 14-10-2018 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 PhaeoP54_03480 a25289a5dfd1244b923610855b682e8f 463 PIRSF PIRSF001109 1 463 9.6E-183 T 14-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 PhaeoP54_01667 af8e336e49d43e2ebca128560f33618a 167 Hamap MF_01903 Xanthine phosphoribosyltransferase [gpt]. 7 167 41.238 T 14-10-2018 IPR023747 Xanthine-guanine phosphoribosyltransferase GO:0000310 KEGG: 00230+2.4.2.22 PhaeoP54_01667 af8e336e49d43e2ebca128560f33618a 167 SUPERFAMILY SSF53271 5 159 4.17E-35 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like PhaeoP54_01667 af8e336e49d43e2ebca128560f33618a 167 Pfam PF00156 Phosphoribosyl transferase domain 15 159 1.0E-21 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 PhaeoP54_01667 af8e336e49d43e2ebca128560f33618a 167 Gene3D G3DSA:3.40.50.2020 8 166 2.5E-41 T 14-10-2018 PhaeoP54_02587 b2a3e23be72e59dd2e85ee7d6c21f3be 261 SUPERFAMILY SSF52540 5 233 1.88E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_02587 b2a3e23be72e59dd2e85ee7d6c21f3be 261 SMART SM00382 32 225 1.7E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_02587 b2a3e23be72e59dd2e85ee7d6c21f3be 261 Gene3D G3DSA:3.40.50.300 1 254 3.4E-67 T 14-10-2018 PhaeoP54_02587 b2a3e23be72e59dd2e85ee7d6c21f3be 261 Pfam PF00005 ABC transporter 23 172 2.4E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PhaeoP54_02587 b2a3e23be72e59dd2e85ee7d6c21f3be 261 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PhaeoP54_02730 7bcec1b8bbe3e634694c539991636590 354 SUPERFAMILY SSF51735 131 319 1.04E-57 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PhaeoP54_02730 7bcec1b8bbe3e634694c539991636590 354 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 179 206 - T 14-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 PhaeoP54_02730 7bcec1b8bbe3e634694c539991636590 354 SUPERFAMILY SSF52283 32 165 1.4E-39 T 14-10-2018 PhaeoP54_02730 7bcec1b8bbe3e634694c539991636590 354 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 139 318 3.2E-56 T 14-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 PhaeoP54_02730 7bcec1b8bbe3e634694c539991636590 354 Gene3D G3DSA:3.40.50.720 34 345 1.3E-107 T 14-10-2018 PhaeoP54_02730 7bcec1b8bbe3e634694c539991636590 354 Gene3D G3DSA:3.40.50.720 128 318 1.3E-107 T 14-10-2018 PhaeoP54_02730 7bcec1b8bbe3e634694c539991636590 354 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 34 349 2.6E-32 T 14-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 PhaeoP54_02730 7bcec1b8bbe3e634694c539991636590 354 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 258 274 - T 14-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site PhaeoP54_01675 b4155bd9ad4b15bcdea3a947cfd40593 270 Gene3D G3DSA:3.20.20.70 1 264 1.3E-94 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PhaeoP54_01675 b4155bd9ad4b15bcdea3a947cfd40593 270 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 4 262 34.858 T 14-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 PhaeoP54_01675 b4155bd9ad4b15bcdea3a947cfd40593 270 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 56 74 - T 14-10-2018 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48 PhaeoP54_01675 b4155bd9ad4b15bcdea3a947cfd40593 270 SUPERFAMILY SSF51366 13 262 6.59E-86 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 PhaeoP54_01675 b4155bd9ad4b15bcdea3a947cfd40593 270 Pfam PF00218 Indole-3-glycerol phosphate synthase 6 259 1.7E-95 T 14-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 PhaeoP54_02230 8d011f4b81465aa8b1f47a03691b9750 521 Pfam PF02601 Exonuclease VII, large subunit 137 476 4.0E-97 T 14-10-2018 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 PhaeoP54_02230 8d011f4b81465aa8b1f47a03691b9750 521 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 18 479 26.786 T 14-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 PhaeoP54_02230 8d011f4b81465aa8b1f47a03691b9750 521 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 22 363 1.6E-113 T 14-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 PhaeoP54_02230 8d011f4b81465aa8b1f47a03691b9750 521 Pfam PF13742 OB-fold nucleic acid binding domain 21 113 1.1E-19 T 14-10-2018 IPR025824 OB-fold nucleic acid binding domain GO:0003676 PhaeoP54_00071 6f5e0bece1d9c29b78030207c00de969 139 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 21 37 - T 14-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 PhaeoP54_00071 6f5e0bece1d9c29b78030207c00de969 139 Gene3D G3DSA:3.30.160.20 1 138 1.9E-40 T 14-10-2018 PhaeoP54_00071 6f5e0bece1d9c29b78030207c00de969 139 Pfam PF00472 RF-1 domain 8 133 1.0E-23 T 14-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 PhaeoP54_00071 6f5e0bece1d9c29b78030207c00de969 139 SUPERFAMILY SSF75620 8 109 3.06E-12 T 14-10-2018 PhaeoP54_00421 29840fcd1b371a2d4c5a21e8a42f8eee 1140 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 454 538 2.3E-5 T 14-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 PhaeoP54_00421 29840fcd1b371a2d4c5a21e8a42f8eee 1140 Gene3D G3DSA:3.40.920.10 716 928 1.4E-15 T 14-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 PhaeoP54_00421 29840fcd1b371a2d4c5a21e8a42f8eee 1140 Gene3D G3DSA:3.40.50.970 9 226 5.2E-28 T 14-10-2018 PhaeoP54_00421 29840fcd1b371a2d4c5a21e8a42f8eee 1140 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 727 913 9.6E-18 T 14-10-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 PhaeoP54_00421 29840fcd1b371a2d4c5a21e8a42f8eee 1140 SUPERFAMILY SSF52518 434 619 1.47E-11 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold PhaeoP54_00421 29840fcd1b371a2d4c5a21e8a42f8eee 1140 SUPERFAMILY SSF53323 719 925 3.66E-23 T 14-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 PhaeoP54_00421 29840fcd1b371a2d4c5a21e8a42f8eee 1140 SUPERFAMILY SSF52518 22 234 5.41E-19 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold PhaeoP54_01523 128db1dfb1dc740cb00ccbba00b9f7cb 347 Pfam PF00266 Aminotransferase class-V 122 331 2.0E-24 T 14-10-2018 IPR000192 Aminotransferase class V domain PhaeoP54_01523 128db1dfb1dc740cb00ccbba00b9f7cb 347 Pfam PF00266 Aminotransferase class-V 4 80 5.6E-11 T 14-10-2018 IPR000192 Aminotransferase class V domain PhaeoP54_01523 128db1dfb1dc740cb00ccbba00b9f7cb 347 PIRSF PIRSF005572 1 345 9.7E-89 T 14-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 PhaeoP54_01523 128db1dfb1dc740cb00ccbba00b9f7cb 347 Gene3D G3DSA:3.40.640.10 60 199 2.2E-91 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PhaeoP54_01523 128db1dfb1dc740cb00ccbba00b9f7cb 347 SUPERFAMILY SSF53383 3 334 1.3E-64 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PhaeoP54_01523 128db1dfb1dc740cb00ccbba00b9f7cb 347 Gene3D G3DSA:1.10.260.50 15 244 2.2E-91 T 14-10-2018 PhaeoP54_01523 128db1dfb1dc740cb00ccbba00b9f7cb 347 Gene3D G3DSA:3.90.1150.10 4 333 2.2E-91 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 PhaeoP54_03010 a70ef78c0a6e2a7fdca932f4bdc630ba 314 SUPERFAMILY SSF103481 69 155 6.54E-8 T 14-10-2018 PhaeoP54_03010 a70ef78c0a6e2a7fdca932f4bdc630ba 314 SUPERFAMILY SSF103481 209 306 1.7E-6 T 14-10-2018 PhaeoP54_03010 a70ef78c0a6e2a7fdca932f4bdc630ba 314 Pfam PF00892 EamA-like transporter family 166 301 7.6E-9 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 PhaeoP54_03010 a70ef78c0a6e2a7fdca932f4bdc630ba 314 Pfam PF00892 EamA-like transporter family 10 152 7.0E-7 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 PhaeoP54_03023 1b8aae7d25dd18f6f625b5bd61e59561 66 Pfam PF00831 Ribosomal L29 protein 4 60 2.0E-23 T 14-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PhaeoP54_03023 1b8aae7d25dd18f6f625b5bd61e59561 66 TIGRFAM TIGR00012 L29: ribosomal protein uL29 5 60 2.4E-20 T 14-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PhaeoP54_03023 1b8aae7d25dd18f6f625b5bd61e59561 66 Gene3D G3DSA:1.10.287.310 1 63 4.1E-26 T 14-10-2018 PhaeoP54_03023 1b8aae7d25dd18f6f625b5bd61e59561 66 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 60 16.95 T 14-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PhaeoP54_03023 1b8aae7d25dd18f6f625b5bd61e59561 66 SUPERFAMILY SSF46561 1 62 9.03E-21 T 14-10-2018 IPR036049 Ribosomal protein L29/L35 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PhaeoP54_02998 32667da373448bc818f72418b2728745 348 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 12 328 1.2E-63 T 14-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 PhaeoP54_02998 32667da373448bc818f72418b2728745 348 SMART SM00363 16 73 1.5E-5 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PhaeoP54_02998 32667da373448bc818f72418b2728745 348 Pfam PF00849 RNA pseudouridylate synthase 101 261 2.4E-31 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 PhaeoP54_02998 32667da373448bc818f72418b2728745 348 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 140 154 - T 14-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 PhaeoP54_02998 32667da373448bc818f72418b2728745 348 Pfam PF01479 S4 domain 16 62 3.1E-6 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PhaeoP54_02998 32667da373448bc818f72418b2728745 348 Gene3D G3DSA:3.30.2350.10 92 332 2.7E-64 T 14-10-2018 PhaeoP54_02998 32667da373448bc818f72418b2728745 348 Gene3D G3DSA:3.10.290.10 5 67 3.5E-14 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 PhaeoP54_02998 32667da373448bc818f72418b2728745 348 SUPERFAMILY SSF55174 16 66 3.09E-7 T 14-10-2018 PhaeoP54_02998 32667da373448bc818f72418b2728745 348 SUPERFAMILY SSF55120 89 337 3.04E-61 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 PhaeoP54_01945 bb954662a7f032c8ec783437d0c2a329 373 SUPERFAMILY SSF56014 270 357 3.11E-15 T 14-10-2018 PhaeoP54_01945 bb954662a7f032c8ec783437d0c2a329 373 SUPERFAMILY SSF51717 21 212 2.51E-10 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 PhaeoP54_01945 bb954662a7f032c8ec783437d0c2a329 373 Gene3D G3DSA:3.30.413.10 267 367 1.2E-26 T 14-10-2018 PhaeoP54_01945 bb954662a7f032c8ec783437d0c2a329 373 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 14 358 1.5E-138 T 14-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 PhaeoP54_01945 bb954662a7f032c8ec783437d0c2a329 373 Gene3D G3DSA:3.20.20.20 4 266 1.5E-105 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 PhaeoP54_01945 bb954662a7f032c8ec783437d0c2a329 373 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 12 364 33.368 T 14-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 PhaeoP54_01945 bb954662a7f032c8ec783437d0c2a329 373 PIRSF PIRSF004640 6 369 2.7E-148 T 14-10-2018 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 PhaeoP54_01945 bb954662a7f032c8ec783437d0c2a329 373 Pfam PF04551 GcpE protein 18 360 3.5E-131 T 14-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 PhaeoP54_01131 f0b515b07be20242b350a4488bd8d940 226 SUPERFAMILY SSF52317 19 181 1.01E-37 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like PhaeoP54_01131 f0b515b07be20242b350a4488bd8d940 226 Pfam PF00117 Glutamine amidotransferase class-I 76 178 1.4E-10 T 14-10-2018 IPR017926 Glutamine amidotransferase PhaeoP54_01131 f0b515b07be20242b350a4488bd8d940 226 Gene3D G3DSA:3.40.50.880 16 224 5.0E-44 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like PhaeoP54_02140 3e6f4061e5de433fa09fc0d28db8ebb0 410 Gene3D G3DSA:3.30.450.20 108 249 5.2E-16 T 14-10-2018 PhaeoP54_02140 3e6f4061e5de433fa09fc0d28db8ebb0 410 Pfam PF07568 Histidine kinase 199 270 5.1E-23 T 14-10-2018 IPR011495 Signal transduction histidine kinase, subgroup 2, dimerisation and phosphoacceptor domain PhaeoP54_02140 3e6f4061e5de433fa09fc0d28db8ebb0 410 SUPERFAMILY SSF55874 251 408 1.31E-10 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PhaeoP54_02140 3e6f4061e5de433fa09fc0d28db8ebb0 410 SUPERFAMILY SSF55785 65 183 4.89E-12 T 14-10-2018 IPR035965 PAS domain superfamily PhaeoP54_02140 3e6f4061e5de433fa09fc0d28db8ebb0 410 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 66 189 5.1E-8 T 14-10-2018 IPR000014 PAS domain PhaeoP54_02140 3e6f4061e5de433fa09fc0d28db8ebb0 410 SMART SM00911 199 286 4.2E-4 T 14-10-2018 IPR011102 Signal transduction histidine kinase, HWE region GO:0004673 PhaeoP54_02140 3e6f4061e5de433fa09fc0d28db8ebb0 410 Gene3D G3DSA:3.30.565.10 254 410 1.5E-18 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PhaeoP54_02140 3e6f4061e5de433fa09fc0d28db8ebb0 410 Pfam PF13426 PAS domain 76 183 5.4E-6 T 14-10-2018 IPR000014 PAS domain PhaeoP54_02661 dffe0236dfa3b06a92ff36ec85ba10ee 241 Pfam PF00106 short chain dehydrogenase 5 198 7.9E-21 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_02661 dffe0236dfa3b06a92ff36ec85ba10ee 241 SUPERFAMILY SSF51735 6 240 2.6E-45 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PhaeoP54_02661 dffe0236dfa3b06a92ff36ec85ba10ee 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 6.3E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_02661 dffe0236dfa3b06a92ff36ec85ba10ee 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 6.3E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_02661 dffe0236dfa3b06a92ff36ec85ba10ee 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 6.3E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_02661 dffe0236dfa3b06a92ff36ec85ba10ee 241 Gene3D G3DSA:3.40.50.720 2 241 3.4E-45 T 14-10-2018 PhaeoP54_00927 8b9d25fecbea50f946807623b7c0367e 147 Pfam PF12802 MarR family 51 113 2.8E-13 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PhaeoP54_00927 8b9d25fecbea50f946807623b7c0367e 147 SMART SM00347 46 143 6.7E-12 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PhaeoP54_00927 8b9d25fecbea50f946807623b7c0367e 147 SUPERFAMILY SSF46785 30 141 1.08E-25 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_00927 8b9d25fecbea50f946807623b7c0367e 147 PRINTS PR00598 Bacterial regulatory protein MarR family signature 73 89 5.1E-7 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PhaeoP54_00927 8b9d25fecbea50f946807623b7c0367e 147 PRINTS PR00598 Bacterial regulatory protein MarR family signature 90 105 5.1E-7 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PhaeoP54_00927 8b9d25fecbea50f946807623b7c0367e 147 PRINTS PR00598 Bacterial regulatory protein MarR family signature 109 125 5.1E-7 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PhaeoP54_00927 8b9d25fecbea50f946807623b7c0367e 147 Gene3D G3DSA:1.10.10.10 9 146 6.6E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_02784 a5c4bb128a406eb49c19606298d36439 377 Pfam PF00285 Citrate synthase, C-terminal domain 10 359 4.2E-106 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 PhaeoP54_02784 a5c4bb128a406eb49c19606298d36439 377 PIRSF PIRSF001369 1 377 1.5E-117 T 14-10-2018 IPR024176 Citrate synthase, bacterial-type PhaeoP54_02784 a5c4bb128a406eb49c19606298d36439 377 ProSitePatterns PS00480 Citrate synthase signature. 258 270 - T 14-10-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 PhaeoP54_02784 a5c4bb128a406eb49c19606298d36439 377 SUPERFAMILY SSF48256 7 377 2.75E-113 T 14-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 PhaeoP54_02784 a5c4bb128a406eb49c19606298d36439 377 Gene3D G3DSA:1.10.580.10 24 349 1.3E-113 T 14-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 PhaeoP54_02784 a5c4bb128a406eb49c19606298d36439 377 PRINTS PR00143 Citrate synthase signature 176 191 2.9E-30 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 PhaeoP54_02784 a5c4bb128a406eb49c19606298d36439 377 PRINTS PR00143 Citrate synthase signature 127 140 2.9E-30 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 PhaeoP54_02784 a5c4bb128a406eb49c19606298d36439 377 PRINTS PR00143 Citrate synthase signature 198 226 2.9E-30 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 PhaeoP54_02784 a5c4bb128a406eb49c19606298d36439 377 PRINTS PR00143 Citrate synthase signature 251 271 2.9E-30 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 PhaeoP54_02784 a5c4bb128a406eb49c19606298d36439 377 PRINTS PR00143 Citrate synthase signature 310 326 2.9E-30 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 PhaeoP54_02784 a5c4bb128a406eb49c19606298d36439 377 PRINTS PR00143 Citrate synthase signature 330 344 2.9E-30 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 PhaeoP54_02784 a5c4bb128a406eb49c19606298d36439 377 Gene3D G3DSA:1.10.230.10 224 324 1.3E-113 T 14-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain PhaeoP54_00902 db569d231f14c35574be095e6eb4262b 79 SUPERFAMILY SSF54909 2 78 4.69E-16 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel PhaeoP54_00902 db569d231f14c35574be095e6eb4262b 79 Gene3D G3DSA:3.30.70.920 5 79 1.0E-14 T 14-10-2018 PhaeoP54_00902 db569d231f14c35574be095e6eb4262b 79 Pfam PF01037 Lrp/AsnC ligand binding domain 7 76 1.7E-9 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain PhaeoP54_01548 b682d9055440ed51f59392d2a6a91390 149 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 149 67.945 T 14-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 PhaeoP54_01548 b682d9055440ed51f59392d2a6a91390 149 SUPERFAMILY SSF52304 3 145 2.49E-59 T 14-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 PhaeoP54_01548 b682d9055440ed51f59392d2a6a91390 149 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 16 132 1.0E-45 T 14-10-2018 PhaeoP54_01548 b682d9055440ed51f59392d2a6a91390 149 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 4 141 7.9E-57 T 14-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 PhaeoP54_01548 b682d9055440ed51f59392d2a6a91390 149 Gene3D G3DSA:3.40.50.9100 1 148 1.3E-62 T 14-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 PhaeoP54_01548 b682d9055440ed51f59392d2a6a91390 149 PIRSF PIRSF001399 1 146 4.4E-60 T 14-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 PhaeoP54_01548 b682d9055440ed51f59392d2a6a91390 149 ProSitePatterns PS01029 Dehydroquinase class II signature. 7 24 - T 14-10-2018 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 PhaeoP54_01548 b682d9055440ed51f59392d2a6a91390 149 Pfam PF01220 Dehydroquinase class II 3 139 5.3E-59 T 14-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 PhaeoP54_01050 ddcc901b27cd8ac868a63d36302ed2be 217 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 148 167 8.5E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_01050 ddcc901b27cd8ac868a63d36302ed2be 217 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 169 186 8.5E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_01050 ddcc901b27cd8ac868a63d36302ed2be 217 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 8.5E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_01050 ddcc901b27cd8ac868a63d36302ed2be 217 Pfam PF00106 short chain dehydrogenase 4 189 5.8E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_01050 ddcc901b27cd8ac868a63d36302ed2be 217 SUPERFAMILY SSF51735 2 215 3.36E-35 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PhaeoP54_01050 ddcc901b27cd8ac868a63d36302ed2be 217 Gene3D G3DSA:3.40.50.720 1 216 5.7E-37 T 14-10-2018 PhaeoP54_00232 c1f4af50db63452ae4310df9bf8bdd84 257 Pfam PF00005 ABC transporter 22 166 1.4E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PhaeoP54_00232 c1f4af50db63452ae4310df9bf8bdd84 257 Gene3D G3DSA:3.40.50.300 2 240 2.2E-60 T 14-10-2018 PhaeoP54_00232 c1f4af50db63452ae4310df9bf8bdd84 257 PIRSF PIRSF039137 1 240 1.0E-105 T 14-10-2018 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein GO:0015658|GO:0015803 PhaeoP54_00232 c1f4af50db63452ae4310df9bf8bdd84 257 SMART SM00382 30 218 1.9E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_00232 c1f4af50db63452ae4310df9bf8bdd84 257 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PhaeoP54_00232 c1f4af50db63452ae4310df9bf8bdd84 257 SUPERFAMILY SSF52540 4 237 6.1E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_02796 9f32fcfbba1c93d873c98bd2af97f896 180 Gene3D G3DSA:3.40.50.360 2 180 2.8E-45 T 14-10-2018 IPR029039 Flavoprotein-like superfamily PhaeoP54_02796 9f32fcfbba1c93d873c98bd2af97f896 180 Pfam PF03358 NADPH-dependent FMN reductase 4 149 2.7E-34 T 14-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 PhaeoP54_02796 9f32fcfbba1c93d873c98bd2af97f896 180 SUPERFAMILY SSF52218 4 174 5.37E-42 T 14-10-2018 IPR029039 Flavoprotein-like superfamily PhaeoP54_01655 98f2f24dc08d932a142fe6e0479f4ffa 418 SUPERFAMILY SSF53850 22 410 2.54E-81 T 14-10-2018 PhaeoP54_01655 98f2f24dc08d932a142fe6e0479f4ffa 418 Gene3D G3DSA:3.40.190.10 21 414 2.5E-73 T 14-10-2018 PhaeoP54_01655 98f2f24dc08d932a142fe6e0479f4ffa 418 Pfam PF13416 Bacterial extracellular solute-binding protein 43 348 5.0E-38 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein PhaeoP54_03234 efbfa296518c855450fe2ea4b8fdfb46 89 SUPERFAMILY SSF47060 3 89 1.18E-34 T 14-10-2018 IPR009068 S15/NS1, RNA-binding PhaeoP54_03234 efbfa296518c855450fe2ea4b8fdfb46 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 5 89 2.8E-39 T 14-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PhaeoP54_03234 efbfa296518c855450fe2ea4b8fdfb46 89 SMART SM01387 8 88 7.4E-52 T 14-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PhaeoP54_03234 efbfa296518c855450fe2ea4b8fdfb46 89 Gene3D G3DSA:1.10.287.10 1 89 1.6E-35 T 14-10-2018 PhaeoP54_03234 efbfa296518c855450fe2ea4b8fdfb46 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 22.075 T 14-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PhaeoP54_03234 efbfa296518c855450fe2ea4b8fdfb46 89 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 14-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PhaeoP54_03234 efbfa296518c855450fe2ea4b8fdfb46 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 12 88 2.0E-36 T 14-10-2018 PhaeoP54_03234 efbfa296518c855450fe2ea4b8fdfb46 89 Pfam PF00312 Ribosomal protein S15 8 88 2.9E-37 T 14-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PhaeoP54_03309 2a8913ae8f03946930f3cb979576e29e 100 TIGRFAM TIGR00193 urease_gam: urease, gamma subunit 1 100 1.8E-45 T 14-10-2018 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 PhaeoP54_03309 2a8913ae8f03946930f3cb979576e29e 100 ProDom PD002319 SUBUNIT GAMMA HYDROLASE UREASE UREA AMIDOHYDROLASE UREASE ALPHA GAMMA/BETA METAL-BINDING 9 99 6.0E-41 T 14-10-2018 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 PhaeoP54_03309 2a8913ae8f03946930f3cb979576e29e 100 Hamap MF_00739 Urease subunit gamma [ureA]. 1 100 33.301 T 14-10-2018 IPR012010 Urease, gamma subunit GO:0009039|GO:0019627 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 PhaeoP54_03309 2a8913ae8f03946930f3cb979576e29e 100 Gene3D G3DSA:3.30.280.10 1 100 3.1E-46 T 14-10-2018 IPR036463 Urease, gamma subunit superfamily GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 PhaeoP54_03309 2a8913ae8f03946930f3cb979576e29e 100 PIRSF PIRSF001223 1 100 9.0E-50 T 14-10-2018 IPR012010 Urease, gamma subunit GO:0009039|GO:0019627 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 PhaeoP54_03309 2a8913ae8f03946930f3cb979576e29e 100 SUPERFAMILY SSF54111 1 100 3.01E-44 T 14-10-2018 IPR036463 Urease, gamma subunit superfamily GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 PhaeoP54_03309 2a8913ae8f03946930f3cb979576e29e 100 Pfam PF00547 Urease, gamma subunit 1 99 8.7E-47 T 14-10-2018 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 PhaeoP54_03539 62af4d3d0606d8a859992b3ef7c8cad9 323 Gene3D G3DSA:3.10.580.10 197 320 7.6E-39 T 14-10-2018 PhaeoP54_03539 62af4d3d0606d8a859992b3ef7c8cad9 323 Pfam PF00571 CBS domain 265 320 6.5E-7 T 14-10-2018 IPR000644 CBS domain PhaeoP54_03539 62af4d3d0606d8a859992b3ef7c8cad9 323 Pfam PF00571 CBS domain 210 256 0.0011 T 14-10-2018 IPR000644 CBS domain PhaeoP54_03539 62af4d3d0606d8a859992b3ef7c8cad9 323 SMART SM00116 209 257 7.5 T 14-10-2018 IPR000644 CBS domain PhaeoP54_03539 62af4d3d0606d8a859992b3ef7c8cad9 323 SMART SM00116 271 322 1.5 T 14-10-2018 IPR000644 CBS domain PhaeoP54_03539 62af4d3d0606d8a859992b3ef7c8cad9 323 Pfam PF01380 SIS domain 42 171 2.1E-26 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 PhaeoP54_03539 62af4d3d0606d8a859992b3ef7c8cad9 323 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 45 304 5.7E-91 T 14-10-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 PhaeoP54_03539 62af4d3d0606d8a859992b3ef7c8cad9 323 Gene3D G3DSA:3.40.50.10490 3 196 1.4E-60 T 14-10-2018 PhaeoP54_03539 62af4d3d0606d8a859992b3ef7c8cad9 323 SUPERFAMILY SSF53697 9 272 1.76E-58 T 14-10-2018 PhaeoP54_03539 62af4d3d0606d8a859992b3ef7c8cad9 323 PIRSF PIRSF004692 1 323 1.6E-124 T 14-10-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 PhaeoP54_03539 62af4d3d0606d8a859992b3ef7c8cad9 323 SUPERFAMILY SSF54631 257 320 8.12E-9 T 14-10-2018 PhaeoP54_02244 cfa602a39a1b67343acdad5c8013fae6 262 Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. 8 235 31.547 T 14-10-2018 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 PhaeoP54_02244 cfa602a39a1b67343acdad5c8013fae6 262 SUPERFAMILY SSF75445 134 218 2.88E-21 T 14-10-2018 PhaeoP54_02244 cfa602a39a1b67343acdad5c8013fae6 262 Gene3D G3DSA:3.40.50.1360 14 226 3.7E-77 T 14-10-2018 PhaeoP54_02244 cfa602a39a1b67343acdad5c8013fae6 262 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 57 231 1.7E-62 T 14-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 PhaeoP54_02244 cfa602a39a1b67343acdad5c8013fae6 262 SUPERFAMILY SSF100950 8 152 3.59E-44 T 14-10-2018 IPR037171 NagB/RpiA transferase-like PhaeoP54_02244 cfa602a39a1b67343acdad5c8013fae6 262 Gene3D G3DSA:3.30.70.260 128 206 3.7E-77 T 14-10-2018 PhaeoP54_02244 cfa602a39a1b67343acdad5c8013fae6 262 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 12 232 1.6E-79 T 14-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 PhaeoP54_03800 fc519eadb44317c1765d8bc8b597f030 423 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 316 415 3.8E-20 T 14-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 PhaeoP54_03800 fc519eadb44317c1765d8bc8b597f030 423 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 201 289 1.8E-23 T 14-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 PhaeoP54_03800 fc519eadb44317c1765d8bc8b597f030 423 PIRSF PIRSF000124 5 421 3.4E-47 T 14-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 PhaeoP54_03800 fc519eadb44317c1765d8bc8b597f030 423 PIRSF PIRSF500136 1 422 1.5E-141 T 14-10-2018 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase GO:0000271|GO:0016628|GO:0055114 PhaeoP54_03800 fc519eadb44317c1765d8bc8b597f030 423 SUPERFAMILY SSF51735 6 188 1.53E-43 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PhaeoP54_03800 fc519eadb44317c1765d8bc8b597f030 423 SUPERFAMILY SSF52413 301 417 1.44E-26 T 14-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 PhaeoP54_03800 fc519eadb44317c1765d8bc8b597f030 423 SMART SM00984 316 416 3.9E-33 T 14-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 PhaeoP54_03800 fc519eadb44317c1765d8bc8b597f030 423 Gene3D G3DSA:3.40.50.720 200 422 4.2E-52 T 14-10-2018 PhaeoP54_03800 fc519eadb44317c1765d8bc8b597f030 423 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 6 409 5.2E-113 T 14-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 PhaeoP54_03800 fc519eadb44317c1765d8bc8b597f030 423 Gene3D G3DSA:3.40.50.720 1 195 2.2E-59 T 14-10-2018 PhaeoP54_03800 fc519eadb44317c1765d8bc8b597f030 423 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 6 179 4.3E-31 T 14-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 PhaeoP54_03800 fc519eadb44317c1765d8bc8b597f030 423 SUPERFAMILY SSF48179 199 290 1.31E-23 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 PhaeoP54_03452 d6ec37783e2fa75b92110684feb8ab4d 277 SUPERFAMILY SSF51735 107 271 1.04E-41 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PhaeoP54_03452 d6ec37783e2fa75b92110684feb8ab4d 277 SUPERFAMILY SSF53223 4 106 5.01E-32 T 14-10-2018 PhaeoP54_03452 d6ec37783e2fa75b92110684feb8ab4d 277 Gene3D G3DSA:3.40.50.10860 10 265 1.2E-81 T 14-10-2018 PhaeoP54_03452 d6ec37783e2fa75b92110684feb8ab4d 277 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 8 272 4.3E-68 T 14-10-2018 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 PhaeoP54_03452 d6ec37783e2fa75b92110684feb8ab4d 277 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 11 93 1.4E-26 T 14-10-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 PhaeoP54_03452 d6ec37783e2fa75b92110684feb8ab4d 277 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 129 197 5.7E-8 T 14-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase PhaeoP54_03452 d6ec37783e2fa75b92110684feb8ab4d 277 Gene3D G3DSA:3.40.50.720 106 244 1.2E-81 T 14-10-2018 PhaeoP54_03452 d6ec37783e2fa75b92110684feb8ab4d 277 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 6 277 32.411 T 14-10-2018 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 PhaeoP54_01893 6fbf11885a03fdebdfc53372c93a1ffc 315 PIRSF PIRSF036979 13 312 1.0E-99 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 PhaeoP54_01893 6fbf11885a03fdebdfc53372c93a1ffc 315 PRINTS PR00116 Arginase signature 121 136 7.1E-14 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 PhaeoP54_01893 6fbf11885a03fdebdfc53372c93a1ffc 315 PRINTS PR00116 Arginase signature 234 263 7.1E-14 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 PhaeoP54_01893 6fbf11885a03fdebdfc53372c93a1ffc 315 ProSitePatterns PS01053 Arginase family signature. 237 258 - T 14-10-2018 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 PhaeoP54_01893 6fbf11885a03fdebdfc53372c93a1ffc 315 Gene3D G3DSA:3.40.800.10 2 315 9.5E-116 T 14-10-2018 PhaeoP54_01893 6fbf11885a03fdebdfc53372c93a1ffc 315 TIGRFAM TIGR01230 agmatinase: agmatinase 34 307 8.6E-66 T 14-10-2018 IPR005925 Agmatinase-related KEGG: 00330+3.5.3.11|MetaCyc: PWY-40|MetaCyc: PWY-6305|Reactome: R-HSA-351143 PhaeoP54_01893 6fbf11885a03fdebdfc53372c93a1ffc 315 SUPERFAMILY SSF52768 15 308 2.88E-99 T 14-10-2018 IPR023696 Ureohydrolase domain superfamily PhaeoP54_01893 6fbf11885a03fdebdfc53372c93a1ffc 315 Pfam PF00491 Arginase family 35 306 8.6E-89 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 PhaeoP54_01900 d18b3a7048a8533569196a946885c66a 404 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 142 349 5.7E-14 T 14-10-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 PhaeoP54_01900 d18b3a7048a8533569196a946885c66a 404 SUPERFAMILY SSF53335 91 400 2.01E-65 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PhaeoP54_01900 d18b3a7048a8533569196a946885c66a 404 Gene3D G3DSA:3.30.750.80 84 189 7.5E-26 T 14-10-2018 PhaeoP54_01900 d18b3a7048a8533569196a946885c66a 404 Gene3D G3DSA:3.40.50.150 190 403 2.9E-61 T 14-10-2018 PhaeoP54_01900 d18b3a7048a8533569196a946885c66a 404 Gene3D G3DSA:2.30.130.10 10 81 7.7E-13 T 14-10-2018 IPR036974 PUA domain superfamily GO:0003723 PhaeoP54_01900 d18b3a7048a8533569196a946885c66a 404 SUPERFAMILY SSF88697 12 81 1.59E-6 T 14-10-2018 IPR015947 PUA-like superfamily PhaeoP54_00544 b27f59db0b5229215d185b539593c693 152 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 115 121 - T 14-10-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 PhaeoP54_00544 b27f59db0b5229215d185b539593c693 152 Gene3D G3DSA:1.10.10.10 66 149 1.1E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_00544 b27f59db0b5229215d185b539593c693 152 SUPERFAMILY SSF53155 3 71 2.55E-13 T 14-10-2018 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily GO:0003908|GO:0006281 Reactome: R-HSA-5657655 PhaeoP54_00544 b27f59db0b5229215d185b539593c693 152 Gene3D G3DSA:3.30.160.70 3 62 2.2E-10 T 14-10-2018 PhaeoP54_00544 b27f59db0b5229215d185b539593c693 152 SUPERFAMILY SSF46767 66 146 4.45E-25 T 14-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 PhaeoP54_00544 b27f59db0b5229215d185b539593c693 152 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 68 146 5.2E-27 T 14-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 PhaeoP54_00544 b27f59db0b5229215d185b539593c693 152 Hamap MF_00772 Methylated-DNA--protein-cysteine methyltransferase [ogt]. 5 146 34.309 T 14-10-2018 IPR023546 Methylated-DNA--protein-cysteine methyltransferase GO:0003824|GO:0006281 PhaeoP54_00544 b27f59db0b5229215d185b539593c693 152 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 68 145 7.0E-24 T 14-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 PhaeoP54_02691 8737b5bb63504101f1f458fcb1b7b54e 342 Gene3D G3DSA:3.40.50.10490 192 327 1.7E-43 T 14-10-2018 PhaeoP54_02691 8737b5bb63504101f1f458fcb1b7b54e 342 SUPERFAMILY SSF53697 7 340 2.34E-65 T 14-10-2018 PhaeoP54_02691 8737b5bb63504101f1f458fcb1b7b54e 342 Gene3D G3DSA:3.40.50.10490 2 191 1.0E-48 T 14-10-2018 PhaeoP54_02691 8737b5bb63504101f1f458fcb1b7b54e 342 Pfam PF01380 SIS domain 205 297 4.9E-9 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 PhaeoP54_02691 8737b5bb63504101f1f458fcb1b7b54e 342 Pfam PF01380 SIS domain 44 164 1.6E-15 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 PhaeoP54_00170 dfd67e08bbf6eceb2cd679466c2a7da9 409 Pfam PF00487 Fatty acid desaturase 126 364 1.9E-31 T 14-10-2018 IPR005804 Fatty acid desaturase domain GO:0006629 PhaeoP54_01695 e67c228f6c3550bbbfaf1e189b68b13e 721 Gene3D G3DSA:3.90.650.10 27 354 3.4E-128 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily PhaeoP54_01695 e67c228f6c3550bbbfaf1e189b68b13e 721 Gene3D G3DSA:3.30.1330.10 43 190 3.4E-128 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily PhaeoP54_01695 e67c228f6c3550bbbfaf1e189b68b13e 721 SUPERFAMILY SSF55326 11 193 1.06E-50 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily PhaeoP54_01695 e67c228f6c3550bbbfaf1e189b68b13e 721 Pfam PF00586 AIR synthase related protein, N-terminal domain 85 186 1.8E-23 T 14-10-2018 IPR016188 PurM-like, N-terminal domain PhaeoP54_01695 e67c228f6c3550bbbfaf1e189b68b13e 721 Pfam PF00586 AIR synthase related protein, N-terminal domain 448 552 7.7E-22 T 14-10-2018 IPR016188 PurM-like, N-terminal domain PhaeoP54_01695 e67c228f6c3550bbbfaf1e189b68b13e 721 Gene3D G3DSA:3.90.650.10 563 720 7.9E-27 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily PhaeoP54_01695 e67c228f6c3550bbbfaf1e189b68b13e 721 SUPERFAMILY SSF56042 199 420 9.87E-52 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily PhaeoP54_01695 e67c228f6c3550bbbfaf1e189b68b13e 721 SUPERFAMILY SSF56042 564 709 1.79E-24 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily PhaeoP54_01695 e67c228f6c3550bbbfaf1e189b68b13e 721 TIGRFAM TIGR01736 FGAM_synth_II: phosphoribosylformylglycinamidine synthase II 16 702 4.2E-267 T 14-10-2018 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 PhaeoP54_01695 e67c228f6c3550bbbfaf1e189b68b13e 721 SUPERFAMILY SSF55326 389 554 1.83E-46 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily PhaeoP54_01695 e67c228f6c3550bbbfaf1e189b68b13e 721 Pfam PF02769 AIR synthase related protein, C-terminal domain 201 349 1.3E-30 T 14-10-2018 IPR010918 PurM-like, C-terminal domain PhaeoP54_01695 e67c228f6c3550bbbfaf1e189b68b13e 721 Pfam PF02769 AIR synthase related protein, C-terminal domain 566 692 8.1E-12 T 14-10-2018 IPR010918 PurM-like, C-terminal domain PhaeoP54_01695 e67c228f6c3550bbbfaf1e189b68b13e 721 Hamap MF_00420 Phosphoribosylformylglycinamidine synthase subunit PurL [purL]. 1 721 303.326 T 14-10-2018 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 PhaeoP54_01695 e67c228f6c3550bbbfaf1e189b68b13e 721 Gene3D G3DSA:3.30.1330.10 392 554 7.0E-50 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily PhaeoP54_01695 e67c228f6c3550bbbfaf1e189b68b13e 721 PIRSF PIRSF001587 2 721 2.6E-267 T 14-10-2018 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 PhaeoP54_01323 852eb1a85ffd893595b2cdb1b604e214 589 PRINTS PR00344 Bacterial sensor protein C-terminal signature 529 539 8.3E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PhaeoP54_01323 852eb1a85ffd893595b2cdb1b604e214 589 PRINTS PR00344 Bacterial sensor protein C-terminal signature 566 579 8.3E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PhaeoP54_01323 852eb1a85ffd893595b2cdb1b604e214 589 PRINTS PR00344 Bacterial sensor protein C-terminal signature 513 527 8.3E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PhaeoP54_01323 852eb1a85ffd893595b2cdb1b604e214 589 PRINTS PR00344 Bacterial sensor protein C-terminal signature 542 560 8.3E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PhaeoP54_01323 852eb1a85ffd893595b2cdb1b604e214 589 SMART SM00388 365 433 8.4E-9 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PhaeoP54_01323 852eb1a85ffd893595b2cdb1b604e214 589 SUPERFAMILY SSF103190 74 192 1.96E-11 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily PhaeoP54_01323 852eb1a85ffd893595b2cdb1b604e214 589 Pfam PF00512 His Kinase A (phospho-acceptor) domain 365 431 5.2E-8 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PhaeoP54_01323 852eb1a85ffd893595b2cdb1b604e214 589 Gene3D G3DSA:3.30.565.10 434 583 2.0E-33 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PhaeoP54_01323 852eb1a85ffd893595b2cdb1b604e214 589 Gene3D G3DSA:3.30.450.20 73 186 3.1E-16 T 14-10-2018 PhaeoP54_01323 852eb1a85ffd893595b2cdb1b604e214 589 SMART SM00387 475 582 1.3E-25 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PhaeoP54_01323 852eb1a85ffd893595b2cdb1b604e214 589 SUPERFAMILY SSF55874 430 582 7.33E-33 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PhaeoP54_01323 852eb1a85ffd893595b2cdb1b604e214 589 Gene3D G3DSA:1.10.287.130 341 428 1.7E-15 T 14-10-2018 PhaeoP54_01323 852eb1a85ffd893595b2cdb1b604e214 589 SUPERFAMILY SSF47384 358 430 1.49E-10 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 PhaeoP54_01323 852eb1a85ffd893595b2cdb1b604e214 589 PIRSF PIRSF036431 7 589 2.3E-160 T 14-10-2018 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) PhaeoP54_01323 852eb1a85ffd893595b2cdb1b604e214 589 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 475 579 4.0E-14 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PhaeoP54_01106 406d919f148e8d28160bfcacf1edf5aa 595 ProSitePatterns PS00211 ABC transporters family signature. 404 418 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PhaeoP54_01106 406d919f148e8d28160bfcacf1edf5aa 595 SUPERFAMILY SSF52540 268 477 6.74E-52 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_01106 406d919f148e8d28160bfcacf1edf5aa 595 Gene3D G3DSA:3.40.50.300 237 513 2.7E-67 T 14-10-2018 PhaeoP54_01106 406d919f148e8d28160bfcacf1edf5aa 595 Gene3D G3DSA:3.40.50.300 1 219 5.3E-48 T 14-10-2018 PhaeoP54_01106 406d919f148e8d28160bfcacf1edf5aa 595 Pfam PF16326 ABC transporter C-terminal domain 523 591 1.5E-19 T 14-10-2018 IPR032524 ABC transporter Uup, C-terminal GO:0003677 PhaeoP54_01106 406d919f148e8d28160bfcacf1edf5aa 595 SMART SM00382 299 477 1.1E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_01106 406d919f148e8d28160bfcacf1edf5aa 595 SMART SM00382 23 185 2.4E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_01106 406d919f148e8d28160bfcacf1edf5aa 595 Pfam PF00005 ABC transporter 291 432 3.2E-25 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PhaeoP54_01106 406d919f148e8d28160bfcacf1edf5aa 595 Pfam PF00005 ABC transporter 16 140 2.6E-22 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PhaeoP54_01106 406d919f148e8d28160bfcacf1edf5aa 595 Gene3D G3DSA:1.10.287.380 514 595 4.4E-19 T 14-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 PhaeoP54_01106 406d919f148e8d28160bfcacf1edf5aa 595 SUPERFAMILY SSF52540 2 198 1.31E-40 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_02616 38968f0ee31507a30b55a5e793999cc3 269 Gene3D G3DSA:3.40.630.40 20 263 3.6E-83 T 14-10-2018 PhaeoP54_02616 38968f0ee31507a30b55a5e793999cc3 269 Pfam PF05013 N-formylglutamate amidohydrolase 32 236 8.6E-42 T 14-10-2018 IPR007709 N-formylglutamate amidohydrolase PhaeoP54_02616 38968f0ee31507a30b55a5e793999cc3 269 PIRSF PIRSF029730 11 266 3.4E-88 T 14-10-2018 IPR011227 Uncharacterised conserved protein UCP029730 PhaeoP54_02616 38968f0ee31507a30b55a5e793999cc3 269 SUPERFAMILY SSF53187 21 261 3.45E-72 T 14-10-2018 PhaeoP54_00172 7e4139581b339c97a5ffa8d81fa6a811 244 Gene3D G3DSA:1.10.10.10 150 231 5.6E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_00172 7e4139581b339c97a5ffa8d81fa6a811 244 Pfam PF00027 Cyclic nucleotide-binding domain 34 119 2.6E-11 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain PhaeoP54_00172 7e4139581b339c97a5ffa8d81fa6a811 244 SUPERFAMILY SSF51206 10 144 1.57E-17 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like PhaeoP54_00172 7e4139581b339c97a5ffa8d81fa6a811 244 Pfam PF13545 Crp-like helix-turn-helix domain 153 226 1.4E-13 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 PhaeoP54_00172 7e4139581b339c97a5ffa8d81fa6a811 244 SMART SM00100 15 144 0.0045 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain PhaeoP54_00172 7e4139581b339c97a5ffa8d81fa6a811 244 Gene3D G3DSA:2.60.120.10 32 149 2.4E-20 T 14-10-2018 IPR014710 RmlC-like jelly roll fold PhaeoP54_00172 7e4139581b339c97a5ffa8d81fa6a811 244 SUPERFAMILY SSF46785 150 235 2.34E-15 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_02934 cc85d9c77925755b8dbcaabb2a398963 529 Gene3D G3DSA:3.30.560.10 40 464 8.2E-164 T 14-10-2018 PhaeoP54_02934 cc85d9c77925755b8dbcaabb2a398963 529 SUPERFAMILY SSF51905 1 527 4.21E-84 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PhaeoP54_02934 cc85d9c77925755b8dbcaabb2a398963 529 ProSitePatterns PS00624 GMC oxidoreductases signature 2. 250 264 - T 14-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 PhaeoP54_02934 cc85d9c77925755b8dbcaabb2a398963 529 Pfam PF05199 GMC oxidoreductase 383 519 1.4E-34 T 14-10-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 PhaeoP54_02934 cc85d9c77925755b8dbcaabb2a398963 529 Gene3D G3DSA:3.50.50.60 3 523 8.2E-164 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PhaeoP54_02934 cc85d9c77925755b8dbcaabb2a398963 529 PIRSF PIRSF000137 1 529 1.5E-140 T 14-10-2018 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 PhaeoP54_02934 cc85d9c77925755b8dbcaabb2a398963 529 Pfam PF00732 GMC oxidoreductase 4 291 8.2E-81 T 14-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 PhaeoP54_02934 cc85d9c77925755b8dbcaabb2a398963 529 SUPERFAMILY SSF54373 286 469 3.73E-55 T 14-10-2018 PhaeoP54_03438 0f763392b4a2bf72af008e54c45fbd75 187 Pfam PF01025 GrpE 18 182 1.7E-47 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 PhaeoP54_03438 0f763392b4a2bf72af008e54c45fbd75 187 Gene3D G3DSA:3.90.20.20 11 125 4.5E-23 T 14-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 PhaeoP54_03438 0f763392b4a2bf72af008e54c45fbd75 187 Hamap MF_01151 Protein GrpE [grpE]. 11 183 18.977 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 PhaeoP54_03438 0f763392b4a2bf72af008e54c45fbd75 187 SUPERFAMILY SSF58014 29 126 2.35E-24 T 14-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 PhaeoP54_03438 0f763392b4a2bf72af008e54c45fbd75 187 ProSitePatterns PS01071 grpE protein signature. 138 181 - T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 PhaeoP54_03438 0f763392b4a2bf72af008e54c45fbd75 187 Gene3D G3DSA:2.30.22.10 126 183 4.5E-17 T 14-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 PhaeoP54_03438 0f763392b4a2bf72af008e54c45fbd75 187 SUPERFAMILY SSF51064 131 183 2.62E-15 T 14-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 PhaeoP54_03438 0f763392b4a2bf72af008e54c45fbd75 187 PRINTS PR00773 GrpE protein signature 78 93 9.8E-24 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 PhaeoP54_03438 0f763392b4a2bf72af008e54c45fbd75 187 PRINTS PR00773 GrpE protein signature 162 181 9.8E-24 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 PhaeoP54_03438 0f763392b4a2bf72af008e54c45fbd75 187 PRINTS PR00773 GrpE protein signature 135 150 9.8E-24 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 PhaeoP54_03438 0f763392b4a2bf72af008e54c45fbd75 187 PRINTS PR00773 GrpE protein signature 50 66 9.8E-24 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 PhaeoP54_03982 fe68a797be25a5ec61543e6ca6425bbc 587 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 142 162 5.8E-18 T 14-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 PhaeoP54_03982 fe68a797be25a5ec61543e6ca6425bbc 587 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 299 317 5.8E-18 T 14-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 PhaeoP54_03982 fe68a797be25a5ec61543e6ca6425bbc 587 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 322 342 5.8E-18 T 14-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 PhaeoP54_03982 fe68a797be25a5ec61543e6ca6425bbc 587 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 87 101 5.8E-18 T 14-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 PhaeoP54_03982 fe68a797be25a5ec61543e6ca6425bbc 587 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 280 297 5.8E-18 T 14-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 PhaeoP54_03982 fe68a797be25a5ec61543e6ca6425bbc 587 Gene3D G3DSA:3.40.50.150 63 357 1.6E-68 T 14-10-2018 PhaeoP54_03982 fe68a797be25a5ec61543e6ca6425bbc 587 Pfam PF01555 DNA methylase 88 337 5.9E-47 T 14-10-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 PhaeoP54_03982 fe68a797be25a5ec61543e6ca6425bbc 587 SUPERFAMILY SSF53335 62 347 3.42E-62 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PhaeoP54_03982 fe68a797be25a5ec61543e6ca6425bbc 587 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 91 97 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 PhaeoP54_01750 7446adabe21d4ecf391393fde5e9cc9a 461 Pfam PF02780 Transketolase, C-terminal domain 329 451 1.4E-41 T 14-10-2018 IPR033248 Transketolase, C-terminal domain PhaeoP54_01750 7446adabe21d4ecf391393fde5e9cc9a 461 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 14-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 PhaeoP54_01750 7446adabe21d4ecf391393fde5e9cc9a 461 SUPERFAMILY SSF52922 323 458 2.88E-44 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 PhaeoP54_01750 7446adabe21d4ecf391393fde5e9cc9a 461 SUPERFAMILY SSF52518 140 339 9.32E-67 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold PhaeoP54_01750 7446adabe21d4ecf391393fde5e9cc9a 461 Gene3D G3DSA:3.40.50.920 326 460 2.1E-47 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 PhaeoP54_01750 7446adabe21d4ecf391393fde5e9cc9a 461 Pfam PF02779 Transketolase, pyrimidine binding domain 139 313 1.3E-47 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain PhaeoP54_01750 7446adabe21d4ecf391393fde5e9cc9a 461 Gene3D G3DSA:2.40.50.100 1 106 6.9E-33 T 14-10-2018 PhaeoP54_01750 7446adabe21d4ecf391393fde5e9cc9a 461 SMART SM00861 139 314 2.8E-60 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain PhaeoP54_01750 7446adabe21d4ecf391393fde5e9cc9a 461 SUPERFAMILY SSF51230 1 96 4.58E-30 T 14-10-2018 IPR011053 Single hybrid motif PhaeoP54_01750 7446adabe21d4ecf391393fde5e9cc9a 461 Gene3D G3DSA:3.40.50.970 138 325 6.3E-83 T 14-10-2018 PhaeoP54_01750 7446adabe21d4ecf391393fde5e9cc9a 461 Pfam PF00364 Biotin-requiring enzyme 4 77 3.7E-21 T 14-10-2018 IPR000089 Biotin/lipoyl attachment PhaeoP54_02015 bd95e20f2c32c1ed639476a72c12c4e5 106 Gene3D G3DSA:3.40.30.10 1 102 8.5E-23 T 14-10-2018 PhaeoP54_02015 bd95e20f2c32c1ed639476a72c12c4e5 106 Pfam PF03960 ArsC family 47 97 1.8E-8 T 14-10-2018 IPR006660 Arsenate reductase-like PhaeoP54_02015 bd95e20f2c32c1ed639476a72c12c4e5 106 SUPERFAMILY SSF52833 1 99 4.47E-20 T 14-10-2018 IPR036249 Thioredoxin-like superfamily PhaeoP54_02193 4c741ddee76d4ec90f3c86b131cedfa8 344 SMART SM00382 53 242 8.0E-18 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_02193 4c741ddee76d4ec90f3c86b131cedfa8 344 ProSitePatterns PS00211 ABC transporters family signature. 165 179 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PhaeoP54_02193 4c741ddee76d4ec90f3c86b131cedfa8 344 SUPERFAMILY SSF52540 39 264 1.25E-75 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_02193 4c741ddee76d4ec90f3c86b131cedfa8 344 TIGRFAM TIGR01186 proV: glycine betaine/L-proline transport ATP binding subunit 37 281 4.6E-103 T 14-10-2018 IPR005892 Glycine betaine transport ATP-binding subunit GO:0005524|GO:0016020|GO:0031460 PhaeoP54_02193 4c741ddee76d4ec90f3c86b131cedfa8 344 Gene3D G3DSA:3.40.50.300 35 294 1.2E-75 T 14-10-2018 PhaeoP54_02193 4c741ddee76d4ec90f3c86b131cedfa8 344 Pfam PF00005 ABC transporter 46 192 5.7E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PhaeoP54_02701 b9e5b374d0023fea42c2d032ad88823f 486 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 14 187 1.2E-55 T 14-10-2018 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 PhaeoP54_02701 b9e5b374d0023fea42c2d032ad88823f 486 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 167 195 2.0E-48 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 PhaeoP54_02701 b9e5b374d0023fea42c2d032ad88823f 486 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 219 236 2.0E-48 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 PhaeoP54_02701 b9e5b374d0023fea42c2d032ad88823f 486 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 143 156 2.0E-48 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 PhaeoP54_02701 b9e5b374d0023fea42c2d032ad88823f 486 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 237 253 2.0E-48 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 PhaeoP54_02701 b9e5b374d0023fea42c2d032ad88823f 486 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 318 344 2.0E-48 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 PhaeoP54_02701 b9e5b374d0023fea42c2d032ad88823f 486 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 189 482 1.9E-107 T 14-10-2018 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 PhaeoP54_02701 b9e5b374d0023fea42c2d032ad88823f 486 SUPERFAMILY SSF51735 3 190 1.44E-57 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PhaeoP54_02701 b9e5b374d0023fea42c2d032ad88823f 486 SUPERFAMILY SSF55347 177 482 1.63E-107 T 14-10-2018 PhaeoP54_02701 b9e5b374d0023fea42c2d032ad88823f 486 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 10 483 80.861 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 PhaeoP54_02701 b9e5b374d0023fea42c2d032ad88823f 486 ProSitePatterns PS00069 Glucose-6-phosphate dehydrogenase active site. 177 183 - T 14-10-2018 IPR019796 Glucose-6-phosphate dehydrogenase, active site GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 PhaeoP54_02701 b9e5b374d0023fea42c2d032ad88823f 486 PIRSF PIRSF000110 1 484 1.4E-159 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 PhaeoP54_02701 b9e5b374d0023fea42c2d032ad88823f 486 Gene3D G3DSA:3.30.360.10 177 470 2.4E-162 T 14-10-2018 PhaeoP54_02701 b9e5b374d0023fea42c2d032ad88823f 486 Gene3D G3DSA:3.40.50.720 13 430 2.4E-162 T 14-10-2018 PhaeoP54_02701 b9e5b374d0023fea42c2d032ad88823f 486 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 10 483 2.6E-165 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 PhaeoP54_01711 71b4d3706b987c1843db1b1fec8614fd 315 SUPERFAMILY SSF46894 244 310 7.48E-17 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PhaeoP54_01711 71b4d3706b987c1843db1b1fec8614fd 315 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 286 298 5.5E-6 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PhaeoP54_01711 71b4d3706b987c1843db1b1fec8614fd 315 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 270 286 5.5E-6 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PhaeoP54_01711 71b4d3706b987c1843db1b1fec8614fd 315 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 256 270 5.5E-6 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PhaeoP54_01711 71b4d3706b987c1843db1b1fec8614fd 315 Pfam PF00196 Bacterial regulatory proteins, luxR family 255 310 2.8E-14 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PhaeoP54_01711 71b4d3706b987c1843db1b1fec8614fd 315 SMART SM00421 253 310 3.8E-17 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PhaeoP54_01711 71b4d3706b987c1843db1b1fec8614fd 315 Gene3D G3DSA:1.10.10.10 202 313 3.9E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_03161 f8eb724d887c0fe0d67b89adb1f3365a 516 Gene3D G3DSA:1.25.40.80 142 328 1.8E-124 T 14-10-2018 PhaeoP54_03161 f8eb724d887c0fe0d67b89adb1f3365a 516 SUPERFAMILY SSF48173 239 503 4.45E-60 T 14-10-2018 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily Reactome: R-HSA-400253 PhaeoP54_03161 f8eb724d887c0fe0d67b89adb1f3365a 516 Pfam PF04244 Deoxyribodipyrimidine photo-lyase-related protein 17 237 1.4E-81 T 14-10-2018 IPR007357 Deoxyribodipyrimidine photolyase-related protein PhaeoP54_03161 f8eb724d887c0fe0d67b89adb1f3365a 516 Gene3D G3DSA:3.40.50.620 18 239 1.8E-124 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PhaeoP54_03161 f8eb724d887c0fe0d67b89adb1f3365a 516 Gene3D G3DSA:1.10.10.1710 453 516 4.0E-26 T 14-10-2018 PhaeoP54_03161 f8eb724d887c0fe0d67b89adb1f3365a 516 Gene3D G3DSA:1.10.579.10 332 452 3.3E-55 T 14-10-2018 PhaeoP54_03015 60b8c1bea739a31c1175245d08a56945 119 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 10 119 1.6E-39 T 14-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 PhaeoP54_03015 60b8c1bea739a31c1175245d08a56945 119 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 4 119 26.974 T 14-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 PhaeoP54_03015 60b8c1bea739a31c1175245d08a56945 119 SUPERFAMILY SSF53137 5 117 1.13E-48 T 14-10-2018 PhaeoP54_03015 60b8c1bea739a31c1175245d08a56945 119 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 5 119 4.1E-41 T 14-10-2018 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PhaeoP54_03015 60b8c1bea739a31c1175245d08a56945 119 Gene3D G3DSA:3.30.420.100 4 119 8.5E-39 T 14-10-2018 PhaeoP54_00716 5d08d15ee6d921cbb7917a7f65a36e67 1005 Pfam PF00271 Helicase conserved C-terminal domain 163 270 6.8E-11 T 14-10-2018 IPR001650 Helicase, C-terminal PhaeoP54_00716 5d08d15ee6d921cbb7917a7f65a36e67 1005 Gene3D G3DSA:3.40.50.300 152 286 5.2E-33 T 14-10-2018 PhaeoP54_00716 5d08d15ee6d921cbb7917a7f65a36e67 1005 SUPERFAMILY SSF52540 138 384 1.87E-38 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_00716 5d08d15ee6d921cbb7917a7f65a36e67 1005 SUPERFAMILY SSF52540 13 120 5.16E-7 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_00716 5d08d15ee6d921cbb7917a7f65a36e67 1005 Gene3D G3DSA:3.40.50.300 4 146 6.4E-26 T 14-10-2018 PhaeoP54_00716 5d08d15ee6d921cbb7917a7f65a36e67 1005 SMART SM00490 182 271 5.3E-15 T 14-10-2018 IPR001650 Helicase, C-terminal PhaeoP54_02463 d752af0fe85c36ebb6dbac5c39fb0bb7 350 SUPERFAMILY SSF63829 43 347 1.5E-21 T 14-10-2018 PhaeoP54_02463 d752af0fe85c36ebb6dbac5c39fb0bb7 350 Gene3D G3DSA:2.120.10.30 20 349 3.4E-63 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like PhaeoP54_01221 69d062e2afbc899d1e11689b478c0c40 191 SUPERFAMILY SSF52833 37 131 5.46E-12 T 14-10-2018 IPR036249 Thioredoxin-like superfamily PhaeoP54_01221 69d062e2afbc899d1e11689b478c0c40 191 Pfam PF13098 Thioredoxin-like domain 48 131 3.7E-14 T 14-10-2018 IPR012336 Thioredoxin-like fold PhaeoP54_01221 69d062e2afbc899d1e11689b478c0c40 191 Gene3D G3DSA:3.40.30.10 33 187 1.0E-26 T 14-10-2018 PhaeoP54_02543 4fca4d206f030e75bb84be3c632e1ba0 511 SMART SM00267 323 496 7.7E-61 T 14-10-2018 IPR000160 GGDEF domain PhaeoP54_02543 4fca4d206f030e75bb84be3c632e1ba0 511 Gene3D G3DSA:3.30.70.270 332 500 5.7E-57 T 14-10-2018 PhaeoP54_02543 4fca4d206f030e75bb84be3c632e1ba0 511 Pfam PF12860 PAS fold 31 140 3.3E-15 T 14-10-2018 PhaeoP54_02543 4fca4d206f030e75bb84be3c632e1ba0 511 SUPERFAMILY SSF55073 339 494 1.26E-47 T 14-10-2018 IPR029787 Nucleotide cyclase PhaeoP54_02543 4fca4d206f030e75bb84be3c632e1ba0 511 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 331 494 3.1E-49 T 14-10-2018 IPR000160 GGDEF domain PhaeoP54_02543 4fca4d206f030e75bb84be3c632e1ba0 511 Gene3D G3DSA:3.30.450.40 163 331 2.5E-6 T 14-10-2018 IPR029016 GAF-like domain superfamily PhaeoP54_02543 4fca4d206f030e75bb84be3c632e1ba0 511 SUPERFAMILY SSF55781 170 329 8.29E-8 T 14-10-2018 PhaeoP54_02543 4fca4d206f030e75bb84be3c632e1ba0 511 Pfam PF00990 Diguanylate cyclase, GGDEF domain 335 491 5.4E-46 T 14-10-2018 IPR000160 GGDEF domain PhaeoP54_01837 446c07a1d72cf6f644c9e4b2957c0877 430 SUPERFAMILY SSF111369 94 179 1.14E-11 T 14-10-2018 PhaeoP54_01837 446c07a1d72cf6f644c9e4b2957c0877 430 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 183 342 3.1E-18 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain PhaeoP54_01837 446c07a1d72cf6f644c9e4b2957c0877 430 Gene3D G3DSA:2.40.420.20 353 421 2.3E-47 T 14-10-2018 PhaeoP54_01837 446c07a1d72cf6f644c9e4b2957c0877 430 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 92 422 9.7E-40 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 PhaeoP54_01837 446c07a1d72cf6f644c9e4b2957c0877 430 Gene3D G3DSA:2.40.30.170 92 352 2.3E-47 T 14-10-2018 PhaeoP54_01837 446c07a1d72cf6f644c9e4b2957c0877 430 Gene3D G3DSA:2.40.50.100 102 272 2.3E-47 T 14-10-2018 PhaeoP54_01837 446c07a1d72cf6f644c9e4b2957c0877 430 SUPERFAMILY SSF111369 160 347 1.11E-14 T 14-10-2018 PhaeoP54_01837 446c07a1d72cf6f644c9e4b2957c0877 430 Gene3D G3DSA:1.10.287.470 158 238 2.3E-47 T 14-10-2018 PhaeoP54_01715 1f3246d08d37aaf81a2a3db9f671d4b4 124 Gene3D G3DSA:1.10.10.10 1 124 6.2E-43 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_01715 1f3246d08d37aaf81a2a3db9f671d4b4 124 Pfam PF01638 HxlR-like helix-turn-helix 25 108 5.2E-30 T 14-10-2018 IPR002577 Helix-turn-helix, HxlR type PhaeoP54_01715 1f3246d08d37aaf81a2a3db9f671d4b4 124 SUPERFAMILY SSF46785 14 121 2.61E-34 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_00320 de3dc481abb2f060b75656c033f7d935 421 SUPERFAMILY SSF51419 26 284 2.62E-77 T 14-10-2018 IPR029066 PLP-binding barrel PhaeoP54_00320 de3dc481abb2f060b75656c033f7d935 421 Gene3D G3DSA:2.40.37.10 16 412 4.3E-147 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 PhaeoP54_00320 de3dc481abb2f060b75656c033f7d935 421 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 36 281 3.9E-60 T 14-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 PhaeoP54_00320 de3dc481abb2f060b75656c033f7d935 421 SUPERFAMILY SSF50621 255 418 5.23E-54 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 PhaeoP54_00320 de3dc481abb2f060b75656c033f7d935 421 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 7 415 4.5E-143 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 PhaeoP54_00320 de3dc481abb2f060b75656c033f7d935 421 Gene3D G3DSA:3.20.20.10 34 277 4.3E-147 T 14-10-2018 IPR029066 PLP-binding barrel PhaeoP54_00320 de3dc481abb2f060b75656c033f7d935 421 PRINTS PR01181 Diaminopimelate decarboxylase signature 300 318 2.2E-26 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 PhaeoP54_00320 de3dc481abb2f060b75656c033f7d935 421 PRINTS PR01181 Diaminopimelate decarboxylase signature 164 173 2.2E-26 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 PhaeoP54_00320 de3dc481abb2f060b75656c033f7d935 421 PRINTS PR01181 Diaminopimelate decarboxylase signature 383 405 2.2E-26 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 PhaeoP54_00320 de3dc481abb2f060b75656c033f7d935 421 PRINTS PR01181 Diaminopimelate decarboxylase signature 75 92 2.2E-26 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 PhaeoP54_00320 de3dc481abb2f060b75656c033f7d935 421 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 15 416 40.124 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 PhaeoP54_00320 de3dc481abb2f060b75656c033f7d935 421 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 226 241 - T 14-10-2018 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site PhaeoP54_00320 de3dc481abb2f060b75656c033f7d935 421 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 282 373 8.0E-27 T 14-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 PhaeoP54_00320 de3dc481abb2f060b75656c033f7d935 421 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 373 386 6.0E-21 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 PhaeoP54_00320 de3dc481abb2f060b75656c033f7d935 421 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 190 203 6.0E-21 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 PhaeoP54_00320 de3dc481abb2f060b75656c033f7d935 421 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 77 89 6.0E-21 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 PhaeoP54_00320 de3dc481abb2f060b75656c033f7d935 421 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 57 75 6.0E-21 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 PhaeoP54_00320 de3dc481abb2f060b75656c033f7d935 421 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 272 291 6.0E-21 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 PhaeoP54_01583 ee52c0c6084fef29a68889494078e66e 84 ProSitePatterns PS00012 Phosphopantetheine attachment site. 30 45 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site PhaeoP54_01583 ee52c0c6084fef29a68889494078e66e 84 SUPERFAMILY SSF47336 5 83 2.22E-15 T 14-10-2018 IPR036736 ACP-like superfamily PhaeoP54_01583 ee52c0c6084fef29a68889494078e66e 84 Gene3D G3DSA:1.10.1200.10 2 79 1.8E-17 T 14-10-2018 IPR036736 ACP-like superfamily PhaeoP54_01583 ee52c0c6084fef29a68889494078e66e 84 Pfam PF00550 Phosphopantetheine attachment site 5 56 6.0E-12 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain PhaeoP54_03221 016167344607da719aa8f635acfd3874 171 Pfam PF11233 Protein of unknown function (DUF3035) 25 165 5.7E-43 T 14-10-2018 IPR021395 Protein of unknown function DUF3035 PhaeoP54_03468 d3f4f0788c84ffa657708940d844eab1 106 SUPERFAMILY SSF52833 3 104 3.51E-39 T 14-10-2018 IPR036249 Thioredoxin-like superfamily PhaeoP54_03468 d3f4f0788c84ffa657708940d844eab1 106 TIGRFAM TIGR01068 thioredoxin: thioredoxin 7 105 7.1E-37 T 14-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 PhaeoP54_03468 d3f4f0788c84ffa657708940d844eab1 106 Gene3D G3DSA:3.40.30.10 1 106 2.4E-37 T 14-10-2018 PhaeoP54_03468 d3f4f0788c84ffa657708940d844eab1 106 PIRSF PIRSF000077 1 106 3.0E-41 T 14-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 PhaeoP54_03468 d3f4f0788c84ffa657708940d844eab1 106 PRINTS PR00421 Thioredoxin family signature 30 39 2.7E-8 T 14-10-2018 PhaeoP54_03468 d3f4f0788c84ffa657708940d844eab1 106 PRINTS PR00421 Thioredoxin family signature 22 30 2.7E-8 T 14-10-2018 PhaeoP54_03468 d3f4f0788c84ffa657708940d844eab1 106 PRINTS PR00421 Thioredoxin family signature 70 81 2.7E-8 T 14-10-2018 PhaeoP54_03468 d3f4f0788c84ffa657708940d844eab1 106 Pfam PF00085 Thioredoxin 4 104 6.8E-35 T 14-10-2018 IPR013766 Thioredoxin domain GO:0045454 PhaeoP54_03468 d3f4f0788c84ffa657708940d844eab1 106 ProSitePatterns PS00194 Thioredoxin family active site. 23 41 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 PhaeoP54_02133 b7eb15769d2f8ca27b2d8357ba1c4dd0 599 Pfam PF00664 ABC transporter transmembrane region 38 305 2.2E-42 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 PhaeoP54_02133 b7eb15769d2f8ca27b2d8357ba1c4dd0 599 ProSitePatterns PS00211 ABC transporters family signature. 493 507 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PhaeoP54_02133 b7eb15769d2f8ca27b2d8357ba1c4dd0 599 Gene3D G3DSA:1.20.1560.10 4 340 8.7E-73 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 PhaeoP54_02133 b7eb15769d2f8ca27b2d8357ba1c4dd0 599 SMART SM00382 381 567 3.7E-18 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_02133 b7eb15769d2f8ca27b2d8357ba1c4dd0 599 Gene3D G3DSA:3.40.50.300 346 595 1.8E-98 T 14-10-2018 PhaeoP54_02133 b7eb15769d2f8ca27b2d8357ba1c4dd0 599 Pfam PF00005 ABC transporter 374 521 1.0E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PhaeoP54_02133 b7eb15769d2f8ca27b2d8357ba1c4dd0 599 SUPERFAMILY SSF52540 346 592 1.81E-92 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_02133 b7eb15769d2f8ca27b2d8357ba1c4dd0 599 SUPERFAMILY SSF90123 26 332 1.31E-66 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 PhaeoP54_02133 b7eb15769d2f8ca27b2d8357ba1c4dd0 599 TIGRFAM TIGR02204 MsbA_rel: ABC transporter, permease/ATP-binding protein 19 592 9.4E-267 T 14-10-2018 IPR011918 ABC transporter, ATP-binding/permease protein PhaeoP54_00402 c8aa11a2f852524219f1f57064285321 190 Gene3D G3DSA:3.30.63.10 39 94 4.8E-16 T 14-10-2018 PhaeoP54_00402 c8aa11a2f852524219f1f57064285321 190 Pfam PF00625 Guanylate kinase 11 154 3.6E-5 T 14-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit PhaeoP54_00402 c8aa11a2f852524219f1f57064285321 190 Hamap MF_00836 Ribose 1,5-bisphosphate phosphokinase PhnN [phnN]. 7 182 32.232 T 14-10-2018 IPR012699 Ribose 1,5-bisphosphate phosphokinase PhnN GO:0006015|GO:0033863 KEGG: 00030+2.7.4.23|MetaCyc: PWY-7805|MetaCyc: PWY-7807 PhaeoP54_00402 c8aa11a2f852524219f1f57064285321 190 Gene3D G3DSA:3.40.50.300 13 152 4.8E-16 T 14-10-2018 PhaeoP54_00402 c8aa11a2f852524219f1f57064285321 190 SMART SM00072 7 185 0.0041 T 14-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit PhaeoP54_00402 c8aa11a2f852524219f1f57064285321 190 TIGRFAM TIGR02322 phosphon_PhnN: phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN 10 175 5.6E-48 T 14-10-2018 IPR012699 Ribose 1,5-bisphosphate phosphokinase PhnN GO:0006015|GO:0033863 KEGG: 00030+2.7.4.23|MetaCyc: PWY-7805|MetaCyc: PWY-7807 PhaeoP54_00402 c8aa11a2f852524219f1f57064285321 190 SUPERFAMILY SSF52540 9 184 3.2E-29 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_01088 9364d96605d036dea29377899cb323f0 393 SMART SM00471 59 208 1.9E-10 T 14-10-2018 IPR003607 HD/PDEase domain PhaeoP54_01088 9364d96605d036dea29377899cb323f0 393 Pfam PF01966 HD domain 63 198 1.0E-15 T 14-10-2018 IPR006674 HD domain PhaeoP54_01088 9364d96605d036dea29377899cb323f0 393 SUPERFAMILY SSF109604 14 380 1.35E-89 T 14-10-2018 PhaeoP54_01088 9364d96605d036dea29377899cb323f0 393 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 26 378 3.7E-94 T 14-10-2018 IPR006261 dNTP triphosphohydrolase GO:0016793 PhaeoP54_01088 9364d96605d036dea29377899cb323f0 393 Gene3D G3DSA:1.10.3210.10 1 379 7.3E-130 T 14-10-2018 PhaeoP54_01088 9364d96605d036dea29377899cb323f0 393 Hamap MF_01212 Deoxyguanosinetriphosphate triphosphohydrolase-like protein. 3 378 38.626 T 14-10-2018 IPR023023 dNTP triphosphohydrolase, type 2 GO:0016793 PhaeoP54_01088 9364d96605d036dea29377899cb323f0 393 Pfam PF13286 Phosphohydrolase-associated domain 285 376 8.6E-26 T 14-10-2018 IPR026875 Phosphohydrolase-associated domain PhaeoP54_01019 08cb125d43d5fdb96bd3d1ad73758e0e 164 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 104 115 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PhaeoP54_01019 08cb125d43d5fdb96bd3d1ad73758e0e 164 SUPERFAMILY SSF54862 38 147 8.37E-29 T 14-10-2018 PhaeoP54_01019 08cb125d43d5fdb96bd3d1ad73758e0e 164 TIGRFAM TIGR01971 NuoI: NADH-quinone oxidoreductase, chain I 21 142 5.5E-52 T 14-10-2018 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PhaeoP54_01019 08cb125d43d5fdb96bd3d1ad73758e0e 164 Gene3D G3DSA:3.30.70.3270 38 163 1.3E-43 T 14-10-2018 PhaeoP54_01019 08cb125d43d5fdb96bd3d1ad73758e0e 164 Pfam PF12838 4Fe-4S dicluster domain 64 118 1.5E-13 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PhaeoP54_01019 08cb125d43d5fdb96bd3d1ad73758e0e 164 Hamap MF_01351 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic [ndhI]. 12 161 28.143 T 14-10-2018 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PhaeoP54_02945 f5a281f39385577f1854693a6c390711 150 SUPERFAMILY SSF46785 3 63 1.29E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_02945 f5a281f39385577f1854693a6c390711 150 SMART SM00344 4 113 3.0E-40 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 PhaeoP54_02945 f5a281f39385577f1854693a6c390711 150 ProSitePatterns PS00519 AsnC-type HTH domain signature. 22 48 - T 14-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site PhaeoP54_02945 f5a281f39385577f1854693a6c390711 150 SUPERFAMILY SSF54909 67 147 2.01E-16 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel PhaeoP54_02945 f5a281f39385577f1854693a6c390711 150 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 31 50 1.5E-17 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 PhaeoP54_02945 f5a281f39385577f1854693a6c390711 150 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 4 20 1.5E-17 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 PhaeoP54_02945 f5a281f39385577f1854693a6c390711 150 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 20 31 1.5E-17 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 PhaeoP54_02945 f5a281f39385577f1854693a6c390711 150 Gene3D G3DSA:3.30.70.920 58 140 1.4E-20 T 14-10-2018 PhaeoP54_02945 f5a281f39385577f1854693a6c390711 150 Pfam PF13412 Winged helix-turn-helix DNA-binding 7 51 2.5E-17 T 14-10-2018 PhaeoP54_02945 f5a281f39385577f1854693a6c390711 150 Pfam PF01037 Lrp/AsnC ligand binding domain 71 142 3.4E-18 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain PhaeoP54_02945 f5a281f39385577f1854693a6c390711 150 Gene3D G3DSA:1.10.10.10 1 57 4.3E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_00227 35cdc97af8d7fdbc98accaed4e1a8ef6 141 Pfam PF02627 Carboxymuconolactone decarboxylase family 35 117 1.2E-21 T 14-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 PhaeoP54_00227 35cdc97af8d7fdbc98accaed4e1a8ef6 141 Gene3D G3DSA:1.20.1290.10 4 127 2.4E-31 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 PhaeoP54_00227 35cdc97af8d7fdbc98accaed4e1a8ef6 141 SUPERFAMILY SSF69118 4 121 3.96E-31 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 PhaeoP54_00227 35cdc97af8d7fdbc98accaed4e1a8ef6 141 TIGRFAM TIGR02425 decarb_PcaC: 4-carboxymuconolactone decarboxylase 4 123 3.5E-53 T 14-10-2018 IPR012788 4-carboxymuconolactone decarboxylase KEGG: 00362+4.1.1.44 PhaeoP54_00470 92aac699dec5873c10303b894c368859 940 Pfam PF10101 Predicted membrane protein (DUF2339) 139 925 9.7E-123 T 14-10-2018 IPR019286 Protein of unknown function DUF2339, transmembrane PhaeoP54_00470 92aac699dec5873c10303b894c368859 940 PIRSF PIRSF035905 7 934 7.5E-85 T 14-10-2018 IPR014600 Uncharacterised conserved protein UCP035905, membrane protein PhaeoP54_02521 f70d369f8e4b1d76c6037c4d08ddc434 140 Pfam PF05099 Tellurite resistance protein TerB 10 124 7.7E-7 T 14-10-2018 IPR007791 Co-chaperone DjlA, N-terminal PhaeoP54_02521 f70d369f8e4b1d76c6037c4d08ddc434 140 SUPERFAMILY SSF158682 8 135 3.4E-13 T 14-10-2018 IPR029024 TerB-like PhaeoP54_02521 f70d369f8e4b1d76c6037c4d08ddc434 140 Gene3D G3DSA:1.10.3680.10 3 126 4.8E-15 T 14-10-2018 IPR029024 TerB-like PhaeoP54_02675 b4ea270e52501ec64a1dceee2973f65e 354 Hamap MF_02040 Iron-sulfur cluster carrier protein. 101 349 36.72 T 14-10-2018 IPR019591 Mrp/NBP35 ATP-binding protein PhaeoP54_02675 b4ea270e52501ec64a1dceee2973f65e 354 Gene3D G3DSA:3.30.300.130 1 92 2.0E-8 T 14-10-2018 IPR034904 Fe-S cluster assembly domain superfamily PhaeoP54_02675 b4ea270e52501ec64a1dceee2973f65e 354 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 106 348 5.2E-100 T 14-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 PhaeoP54_02675 b4ea270e52501ec64a1dceee2973f65e 354 SUPERFAMILY SSF117916 3 87 2.32E-15 T 14-10-2018 IPR034904 Fe-S cluster assembly domain superfamily PhaeoP54_02675 b4ea270e52501ec64a1dceee2973f65e 354 ProSitePatterns PS01215 Mrp family signature. 212 228 - T 14-10-2018 IPR000808 Mrp, conserved site GO:0005524 PhaeoP54_02675 b4ea270e52501ec64a1dceee2973f65e 354 Pfam PF01883 Iron-sulfur cluster assembly protein 7 76 1.7E-16 T 14-10-2018 IPR002744 MIP18 family-like PhaeoP54_02675 b4ea270e52501ec64a1dceee2973f65e 354 Gene3D G3DSA:3.40.50.300 95 347 8.9E-84 T 14-10-2018 PhaeoP54_02675 b4ea270e52501ec64a1dceee2973f65e 354 SUPERFAMILY SSF52540 108 350 3.41E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_03926 c9399f98f4e045f3a44027ff81910ce4 333 SUPERFAMILY SSF81345 13 329 2.35E-48 T 14-10-2018 IPR037294 ABC transporter, BtuC-like PhaeoP54_03926 c9399f98f4e045f3a44027ff81910ce4 333 Gene3D G3DSA:1.10.3470.10 20 332 4.8E-48 T 14-10-2018 IPR037294 ABC transporter, BtuC-like PhaeoP54_03926 c9399f98f4e045f3a44027ff81910ce4 333 Pfam PF01032 FecCD transport family 44 329 4.6E-47 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 PhaeoP54_00278 d07f2f653583b5e9baf2e804e5642007 253 Pfam PF03167 Uracil DNA glycosylase superfamily 100 243 1.5E-41 T 14-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 PhaeoP54_00278 d07f2f653583b5e9baf2e804e5642007 253 SMART SM00987 98 244 1.6E-37 T 14-10-2018 PhaeoP54_00278 d07f2f653583b5e9baf2e804e5642007 253 SUPERFAMILY SSF52141 70 250 1.99E-59 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 PhaeoP54_00278 d07f2f653583b5e9baf2e804e5642007 253 Gene3D G3DSA:3.40.470.10 73 253 2.3E-65 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 PhaeoP54_00278 d07f2f653583b5e9baf2e804e5642007 253 TIGRFAM TIGR00758 UDG_fam4: uracil-DNA glycosylase, family 4 85 250 8.6E-56 T 14-10-2018 IPR005273 Uracil-DNA glycosylase family 4 PhaeoP54_00278 d07f2f653583b5e9baf2e804e5642007 253 SMART SM00986 98 244 1.6E-37 T 14-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 PhaeoP54_03912 f278ec852d5233c2c05564faf930c619 1047 SUPERFAMILY SSF82693 564 652 8.72E-6 T 14-10-2018 PhaeoP54_03912 f278ec852d5233c2c05564faf930c619 1047 Pfam PF00873 AcrB/AcrD/AcrF family 10 1023 2.0E-169 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PhaeoP54_03912 f278ec852d5233c2c05564faf930c619 1047 Gene3D G3DSA:1.20.1640.10 506 1020 2.7E-249 T 14-10-2018 PhaeoP54_03912 f278ec852d5233c2c05564faf930c619 1047 SUPERFAMILY SSF82714 183 263 1.96E-11 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PhaeoP54_03912 f278ec852d5233c2c05564faf930c619 1047 Gene3D G3DSA:3.30.70.1320 133 324 2.7E-249 T 14-10-2018 PhaeoP54_03912 f278ec852d5233c2c05564faf930c619 1047 PRINTS PR00702 Acriflavin resistance protein family signature 435 458 1.8E-28 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PhaeoP54_03912 f278ec852d5233c2c05564faf930c619 1047 PRINTS PR00702 Acriflavin resistance protein family signature 328 351 1.8E-28 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PhaeoP54_03912 f278ec852d5233c2c05564faf930c619 1047 PRINTS PR00702 Acriflavin resistance protein family signature 614 628 1.8E-28 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PhaeoP54_03912 f278ec852d5233c2c05564faf930c619 1047 PRINTS PR00702 Acriflavin resistance protein family signature 11 35 1.8E-28 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PhaeoP54_03912 f278ec852d5233c2c05564faf930c619 1047 PRINTS PR00702 Acriflavin resistance protein family signature 382 406 1.8E-28 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PhaeoP54_03912 f278ec852d5233c2c05564faf930c619 1047 PRINTS PR00702 Acriflavin resistance protein family signature 460 483 1.8E-28 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PhaeoP54_03912 f278ec852d5233c2c05564faf930c619 1047 PRINTS PR00702 Acriflavin resistance protein family signature 39 57 1.8E-28 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PhaeoP54_03912 f278ec852d5233c2c05564faf930c619 1047 SUPERFAMILY SSF82714 707 786 6.15E-6 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PhaeoP54_03912 f278ec852d5233c2c05564faf930c619 1047 Gene3D G3DSA:3.30.70.1430 562 657 2.7E-249 T 14-10-2018 PhaeoP54_03912 f278ec852d5233c2c05564faf930c619 1047 Gene3D G3DSA:3.30.70.1440 658 851 2.7E-249 T 14-10-2018 PhaeoP54_03912 f278ec852d5233c2c05564faf930c619 1047 SUPERFAMILY SSF82866 791 1026 3.79E-41 T 14-10-2018 PhaeoP54_03912 f278ec852d5233c2c05564faf930c619 1047 SUPERFAMILY SSF82693 139 322 4.45E-16 T 14-10-2018 PhaeoP54_03912 f278ec852d5233c2c05564faf930c619 1047 Gene3D G3DSA:1.20.1640.10 12 505 2.7E-249 T 14-10-2018 PhaeoP54_03912 f278ec852d5233c2c05564faf930c619 1047 Gene3D G3DSA:3.30.2090.10 705 793 2.7E-249 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PhaeoP54_03912 f278ec852d5233c2c05564faf930c619 1047 SUPERFAMILY SSF82693 41 133 1.73E-19 T 14-10-2018 PhaeoP54_03912 f278ec852d5233c2c05564faf930c619 1047 Gene3D G3DSA:3.30.2090.10 177 267 2.7E-249 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PhaeoP54_03912 f278ec852d5233c2c05564faf930c619 1047 SUPERFAMILY SSF82866 289 485 1.44E-34 T 14-10-2018 PhaeoP54_03912 f278ec852d5233c2c05564faf930c619 1047 Gene3D G3DSA:3.30.70.1430 41 801 2.7E-249 T 14-10-2018 PhaeoP54_01104 6a5445ceab68e8d2137240470b878108 155 Pfam PF04355 SmpA / OmlA family 35 110 4.0E-12 T 14-10-2018 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 PhaeoP54_00600 1eb6061e57ce6e704f5dc1001e7cb2da 271 SUPERFAMILY SSF81452 3 265 6.02E-87 T 14-10-2018 IPR035973 Cytochrome c oxidase subunit III-like superfamily GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PhaeoP54_00600 1eb6061e57ce6e704f5dc1001e7cb2da 271 Gene3D G3DSA:1.10.287.70 2 70 6.5E-24 T 14-10-2018 PhaeoP54_00600 1eb6061e57ce6e704f5dc1001e7cb2da 271 Pfam PF00510 Cytochrome c oxidase subunit III 7 265 9.4E-78 T 14-10-2018 IPR000298 Cytochrome c oxidase subunit III-like GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PhaeoP54_00600 1eb6061e57ce6e704f5dc1001e7cb2da 271 Gene3D G3DSA:1.20.120.80 71 266 1.1E-70 T 14-10-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PhaeoP54_03605 0343a1e9cb8d0777faecf6687ee073fe 888 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 673 827 7.9E-48 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 PhaeoP54_03605 0343a1e9cb8d0777faecf6687ee073fe 888 SUPERFAMILY SSF58104 579 860 3.4E-65 T 14-10-2018 PhaeoP54_03605 0343a1e9cb8d0777faecf6687ee073fe 888 Gene3D G3DSA:1.10.287.950 562 861 1.6E-74 T 14-10-2018 PhaeoP54_03605 0343a1e9cb8d0777faecf6687ee073fe 888 SMART SM00304 492 545 2.5E-5 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 PhaeoP54_03605 0343a1e9cb8d0777faecf6687ee073fe 888 SMART SM00304 559 611 0.067 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 PhaeoP54_03605 0343a1e9cb8d0777faecf6687ee073fe 888 Gene3D G3DSA:1.20.1480.50 455 551 2.3E-7 T 14-10-2018 PhaeoP54_03605 0343a1e9cb8d0777faecf6687ee073fe 888 Pfam PF00672 HAMP domain 494 541 7.9E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 PhaeoP54_03605 0343a1e9cb8d0777faecf6687ee073fe 888 SUPERFAMILY SSF158472 493 542 3.14E-6 T 14-10-2018 PhaeoP54_03605 0343a1e9cb8d0777faecf6687ee073fe 888 SMART SM00283 612 859 1.6E-92 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 PhaeoP54_00729 9c10e5406f683f583c3dbfa7250d7a7c 430 SUPERFAMILY SSF53383 7 425 1.06E-118 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PhaeoP54_00729 9c10e5406f683f583c3dbfa7250d7a7c 430 TIGRFAM TIGR01326 OAH_OAS_sulfhy: O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase 9 425 1.3E-176 T 14-10-2018 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 PhaeoP54_00729 9c10e5406f683f583c3dbfa7250d7a7c 430 Gene3D G3DSA:3.90.1150.10 294 430 2.0E-50 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 PhaeoP54_00729 9c10e5406f683f583c3dbfa7250d7a7c 430 Gene3D G3DSA:3.40.640.10 8 290 7.4E-90 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PhaeoP54_00729 9c10e5406f683f583c3dbfa7250d7a7c 430 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 10 425 1.0E-127 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 PhaeoP54_00729 9c10e5406f683f583c3dbfa7250d7a7c 430 PIRSF PIRSF001434 1 429 1.7E-121 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 PhaeoP54_01100 3602395061d753f6af4b065b80e65d5a 323 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 108 191 2.2E-33 T 14-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 PhaeoP54_01100 3602395061d753f6af4b065b80e65d5a 323 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 3 323 71.397 T 14-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 PhaeoP54_01100 3602395061d753f6af4b065b80e65d5a 323 Gene3D G3DSA:3.40.47.10 2 323 1.9E-124 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 PhaeoP54_01100 3602395061d753f6af4b065b80e65d5a 323 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 234 323 3.4E-36 T 14-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 PhaeoP54_01100 3602395061d753f6af4b065b80e65d5a 323 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 4 323 1.7E-125 T 14-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 PhaeoP54_01100 3602395061d753f6af4b065b80e65d5a 323 SUPERFAMILY SSF53901 6 323 3.09E-75 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 PhaeoP54_03481 3d0880aaf239322e6bce900ba044caf0 219 Pfam PF05239 PRC-barrel domain 120 175 1.0E-7 T 14-10-2018 IPR027275 PRC-barrel domain PhaeoP54_03481 3d0880aaf239322e6bce900ba044caf0 219 Gene3D G3DSA:2.30.30.240 117 199 5.1E-15 T 14-10-2018 PhaeoP54_03481 3d0880aaf239322e6bce900ba044caf0 219 SUPERFAMILY SSF50346 110 212 4.12E-9 T 14-10-2018 IPR011033 PRC-barrel-like superfamily PhaeoP54_02574 40f4610f0372c48c629b7e7b815ab384 942 Gene3D G3DSA:3.30.70.260 862 941 1.3E-5 T 14-10-2018 PhaeoP54_02574 40f4610f0372c48c629b7e7b815ab384 942 SUPERFAMILY SSF81593 245 367 9.42E-11 T 14-10-2018 PhaeoP54_02574 40f4610f0372c48c629b7e7b815ab384 942 SUPERFAMILY SSF81301 17 223 1.19E-34 T 14-10-2018 PhaeoP54_02574 40f4610f0372c48c629b7e7b815ab384 942 SUPERFAMILY SSF55021 862 926 4.1E-9 T 14-10-2018 PhaeoP54_02574 40f4610f0372c48c629b7e7b815ab384 942 Pfam PF08335 GlnD PII-uridylyltransferase 234 371 1.2E-37 T 14-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 PhaeoP54_02574 40f4610f0372c48c629b7e7b815ab384 942 SUPERFAMILY SSF55021 757 822 2.23E-9 T 14-10-2018 PhaeoP54_02574 40f4610f0372c48c629b7e7b815ab384 942 Gene3D G3DSA:3.30.460.100 19 169 4.4E-6 T 14-10-2018 PhaeoP54_02574 40f4610f0372c48c629b7e7b815ab384 942 SMART SM00471 508 655 1.3E-4 T 14-10-2018 IPR003607 HD/PDEase domain PhaeoP54_02574 40f4610f0372c48c629b7e7b815ab384 942 TIGRFAM TIGR01693 UTase_glnD: protein-P-II uridylyltransferase 87 933 6.7E-269 T 14-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 PhaeoP54_02574 40f4610f0372c48c629b7e7b815ab384 942 Gene3D G3DSA:1.10.3090.10 406 710 4.7E-14 T 14-10-2018 PhaeoP54_02574 40f4610f0372c48c629b7e7b815ab384 942 Pfam PF01842 ACT domain 758 798 2.3E-6 T 14-10-2018 IPR002912 ACT domain PhaeoP54_02574 40f4610f0372c48c629b7e7b815ab384 942 Hamap MF_00277 Bifunctional uridylyltransferase/uridylyl-removing enzyme [glnD]. 63 942 277.689 T 14-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 PhaeoP54_02574 40f4610f0372c48c629b7e7b815ab384 942 Pfam PF01966 HD domain 512 634 1.2E-13 T 14-10-2018 IPR006674 HD domain PhaeoP54_02574 40f4610f0372c48c629b7e7b815ab384 942 Pfam PF01909 Nucleotidyltransferase domain 126 170 1.9E-4 T 14-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 PhaeoP54_02574 40f4610f0372c48c629b7e7b815ab384 942 PIRSF PIRSF006288 51 940 0.0 T 14-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 PhaeoP54_02574 40f4610f0372c48c629b7e7b815ab384 942 SUPERFAMILY SSF81891 409 655 1.14E-27 T 14-10-2018 PhaeoP54_02557 ea82887d4918784c59ca1ea9861bb44a 561 SUPERFAMILY SSF51905 6 438 5.74E-28 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PhaeoP54_02557 ea82887d4918784c59ca1ea9861bb44a 561 Gene3D G3DSA:3.50.50.60 1 513 3.0E-162 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PhaeoP54_02557 ea82887d4918784c59ca1ea9861bb44a 561 Pfam PF04820 Tryptophan halogenase 7 467 4.2E-128 T 14-10-2018 IPR006905 Flavin-dependent halogenase PhaeoP54_01223 0dfd668082597a13d80295bcd0f4316c 138 PIRSF PIRSF010312 4 138 3.9E-39 T 14-10-2018 IPR016568 Sulphur oxidation, SoxY PhaeoP54_01223 0dfd668082597a13d80295bcd0f4316c 138 TIGRFAM TIGR04488 SoxY_true_GGCGG: thiosulfate oxidation carrier protein SoxY 4 138 3.9E-42 T 14-10-2018 IPR016568 Sulphur oxidation, SoxY PhaeoP54_01223 0dfd668082597a13d80295bcd0f4316c 138 Pfam PF13501 Sulfur oxidation protein SoxY 35 136 7.5E-31 T 14-10-2018 IPR032711 Ig-like SoxY domain PhaeoP54_01223 0dfd668082597a13d80295bcd0f4316c 138 Gene3D G3DSA:2.60.40.2470 23 138 1.9E-41 T 14-10-2018 IPR038162 Ig-like SoxY domain superfamily PhaeoP54_01286 3dcb2180ae0c9f553b6b9c79d023c60a 368 SUPERFAMILY SSF51735 7 191 6.64E-28 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PhaeoP54_01286 3dcb2180ae0c9f553b6b9c79d023c60a 368 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 149 236 2.2E-9 T 14-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 PhaeoP54_01286 3dcb2180ae0c9f553b6b9c79d023c60a 368 Gene3D G3DSA:3.30.360.10 143 365 1.1E-23 T 14-10-2018 PhaeoP54_01286 3dcb2180ae0c9f553b6b9c79d023c60a 368 SUPERFAMILY SSF55347 145 274 5.07E-23 T 14-10-2018 PhaeoP54_01286 3dcb2180ae0c9f553b6b9c79d023c60a 368 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 7 124 4.6E-17 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 PhaeoP54_01286 3dcb2180ae0c9f553b6b9c79d023c60a 368 Gene3D G3DSA:3.40.50.720 1 142 4.4E-25 T 14-10-2018 PhaeoP54_03689 57463748ae19fb3e87fc047843defe26 344 SMART SM00382 57 250 3.3E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_03689 57463748ae19fb3e87fc047843defe26 344 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 253 316 1.3E-17 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 PhaeoP54_03689 57463748ae19fb3e87fc047843defe26 344 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 251 335 8.5E-31 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 PhaeoP54_03689 57463748ae19fb3e87fc047843defe26 344 Gene3D G3DSA:3.40.50.300 10 344 5.3E-95 T 14-10-2018 PhaeoP54_03689 57463748ae19fb3e87fc047843defe26 344 ProSitePatterns PS00211 ABC transporters family signature. 173 187 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PhaeoP54_03689 57463748ae19fb3e87fc047843defe26 344 Pfam PF00005 ABC transporter 48 200 2.8E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PhaeoP54_03689 57463748ae19fb3e87fc047843defe26 344 SUPERFAMILY SSF52540 13 272 4.77E-70 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_02734 96f84fccb046265e4657112fc14d4b61 226 SUPERFAMILY SSF48008 81 215 9.15E-10 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal PhaeoP54_02734 96f84fccb046265e4657112fc14d4b61 226 SMART SM00345 17 75 4.5E-7 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PhaeoP54_02734 96f84fccb046265e4657112fc14d4b61 226 SMART SM00895 85 217 4.0E-7 T 14-10-2018 IPR011711 GntR, C-terminal PhaeoP54_02734 96f84fccb046265e4657112fc14d4b61 226 Pfam PF07729 FCD domain 85 213 6.2E-9 T 14-10-2018 IPR011711 GntR, C-terminal PhaeoP54_02734 96f84fccb046265e4657112fc14d4b61 226 Gene3D G3DSA:1.20.120.530 79 220 3.1E-12 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal PhaeoP54_02734 96f84fccb046265e4657112fc14d4b61 226 SUPERFAMILY SSF46785 12 79 1.54E-11 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_02734 96f84fccb046265e4657112fc14d4b61 226 Pfam PF00392 Bacterial regulatory proteins, gntR family 17 75 1.8E-13 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PhaeoP54_02734 96f84fccb046265e4657112fc14d4b61 226 Gene3D G3DSA:1.10.10.10 12 76 3.7E-12 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_01967 7c632432b2adb198abb3212de5caff6c 297 Pfam PF01145 SPFH domain / Band 7 family 33 204 1.3E-33 T 14-10-2018 IPR001107 Band 7 domain PhaeoP54_01967 7c632432b2adb198abb3212de5caff6c 297 Gene3D G3DSA:3.30.479.30 57 189 4.7E-30 T 14-10-2018 PhaeoP54_01967 7c632432b2adb198abb3212de5caff6c 297 SUPERFAMILY SSF117892 60 194 3.4E-31 T 14-10-2018 IPR036013 Band 7/SPFH domain superfamily PhaeoP54_01967 7c632432b2adb198abb3212de5caff6c 297 PRINTS PR00721 Stomatin signature 163 181 1.0E-22 T 14-10-2018 IPR001972 Stomatin family GO:0016020 PhaeoP54_01967 7c632432b2adb198abb3212de5caff6c 297 PRINTS PR00721 Stomatin signature 139 162 1.0E-22 T 14-10-2018 IPR001972 Stomatin family GO:0016020 PhaeoP54_01967 7c632432b2adb198abb3212de5caff6c 297 PRINTS PR00721 Stomatin signature 182 203 1.0E-22 T 14-10-2018 IPR001972 Stomatin family GO:0016020 PhaeoP54_01967 7c632432b2adb198abb3212de5caff6c 297 PRINTS PR00721 Stomatin signature 36 58 1.0E-22 T 14-10-2018 IPR001972 Stomatin family GO:0016020 PhaeoP54_01967 7c632432b2adb198abb3212de5caff6c 297 PRINTS PR00721 Stomatin signature 84 105 1.0E-22 T 14-10-2018 IPR001972 Stomatin family GO:0016020 PhaeoP54_01967 7c632432b2adb198abb3212de5caff6c 297 SMART SM00244 29 187 4.1E-46 T 14-10-2018 IPR001107 Band 7 domain PhaeoP54_00282 918479d7af2ca6a2e4591cbc9b6a1a13 169 Pfam PF00293 NUDIX domain 25 142 1.6E-21 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 PhaeoP54_00282 918479d7af2ca6a2e4591cbc9b6a1a13 169 Gene3D G3DSA:3.90.79.10 19 166 2.2E-29 T 14-10-2018 PhaeoP54_00282 918479d7af2ca6a2e4591cbc9b6a1a13 169 ProSitePatterns PS00893 Nudix box signature. 57 78 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 PhaeoP54_00282 918479d7af2ca6a2e4591cbc9b6a1a13 169 SUPERFAMILY SSF55811 13 153 6.63E-33 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 PhaeoP54_00282 918479d7af2ca6a2e4591cbc9b6a1a13 169 PRINTS PR00502 NUDIX hydrolase family signature 52 66 1.3E-7 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 PhaeoP54_00282 918479d7af2ca6a2e4591cbc9b6a1a13 169 PRINTS PR00502 NUDIX hydrolase family signature 66 81 1.3E-7 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 PhaeoP54_03043 3ac5743d8c942632ac7533e827bb8b0a 258 SUPERFAMILY SSF53448 48 143 2.62E-5 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PhaeoP54_03043 3ac5743d8c942632ac7533e827bb8b0a 258 Pfam PF11316 Putative rhamnosyl transferase 2 234 4.5E-92 T 14-10-2018 IPR021466 Putative rhamnosyl transferase PhaeoP54_03314 006527f0a2d39485dc0b1a0ca662d621 220 Gene3D G3DSA:1.10.4190.10 3 198 1.8E-39 T 14-10-2018 IPR038277 UreF domain superfamily PhaeoP54_03314 006527f0a2d39485dc0b1a0ca662d621 220 Pfam PF01730 UreF 38 177 4.3E-28 T 14-10-2018 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 PhaeoP54_03314 006527f0a2d39485dc0b1a0ca662d621 220 PIRSF PIRSF009467 3 220 8.4E-57 T 14-10-2018 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 PhaeoP54_03314 006527f0a2d39485dc0b1a0ca662d621 220 Hamap MF_01385 Urease accessory protein UreF [ureF]. 6 220 27.374 T 14-10-2018 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 PhaeoP54_00862 1ca616b608d8aa2aeabfd712b53c48a7 373 Pfam PF00925 GTP cyclohydrolase II 227 366 5.5E-17 T 14-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 PhaeoP54_00862 1ca616b608d8aa2aeabfd712b53c48a7 373 Gene3D G3DSA:3.40.50.10990 221 370 3.7E-20 T 14-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 PhaeoP54_00862 1ca616b608d8aa2aeabfd712b53c48a7 373 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 15 217 37.598 T 14-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 PhaeoP54_00862 1ca616b608d8aa2aeabfd712b53c48a7 373 SUPERFAMILY SSF142695 221 370 2.35E-33 T 14-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 PhaeoP54_00862 1ca616b608d8aa2aeabfd712b53c48a7 373 SUPERFAMILY SSF55821 14 216 8.47E-84 T 14-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily PhaeoP54_00862 1ca616b608d8aa2aeabfd712b53c48a7 373 PIRSF PIRSF001259 15 373 2.3E-101 T 14-10-2018 PhaeoP54_00862 1ca616b608d8aa2aeabfd712b53c48a7 373 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 21 212 3.2E-81 T 14-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 PhaeoP54_00862 1ca616b608d8aa2aeabfd712b53c48a7 373 Gene3D G3DSA:3.90.870.10 8 220 3.1E-86 T 14-10-2018 PhaeoP54_00862 1ca616b608d8aa2aeabfd712b53c48a7 373 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 17 213 7.9E-72 T 14-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 PhaeoP54_03435 ca86af8456d062ca48208609ca12a8c2 290 Gene3D G3DSA:3.40.1190.20 1 290 7.4E-77 T 14-10-2018 IPR029056 Ribokinase-like PhaeoP54_03435 ca86af8456d062ca48208609ca12a8c2 290 Hamap MF_01987 Ribokinase [rbsK]. 1 288 20.58 T 14-10-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 PhaeoP54_03435 ca86af8456d062ca48208609ca12a8c2 290 SUPERFAMILY SSF53613 2 288 3.74E-64 T 14-10-2018 IPR029056 Ribokinase-like PhaeoP54_03435 ca86af8456d062ca48208609ca12a8c2 290 PRINTS PR00990 Ribokinase signature 168 183 6.1E-27 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 PhaeoP54_03435 ca86af8456d062ca48208609ca12a8c2 290 PRINTS PR00990 Ribokinase signature 202 213 6.1E-27 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 PhaeoP54_03435 ca86af8456d062ca48208609ca12a8c2 290 PRINTS PR00990 Ribokinase signature 101 114 6.1E-27 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 PhaeoP54_03435 ca86af8456d062ca48208609ca12a8c2 290 PRINTS PR00990 Ribokinase signature 32 51 6.1E-27 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 PhaeoP54_03435 ca86af8456d062ca48208609ca12a8c2 290 PRINTS PR00990 Ribokinase signature 5 26 6.1E-27 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 PhaeoP54_03435 ca86af8456d062ca48208609ca12a8c2 290 Pfam PF00294 pfkB family carbohydrate kinase 6 280 2.9E-43 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB PhaeoP54_03457 ee05e5971d604eb2e977b49f4cf3f506 218 Gene3D G3DSA:3.10.450.240 50 218 5.5E-29 T 14-10-2018 PhaeoP54_03457 ee05e5971d604eb2e977b49f4cf3f506 218 SMART SM00978 70 218 8.4E-45 T 14-10-2018 IPR007379 Tim44-like domain PhaeoP54_03457 ee05e5971d604eb2e977b49f4cf3f506 218 Pfam PF04280 Tim44-like domain 71 217 5.3E-42 T 14-10-2018 IPR007379 Tim44-like domain PhaeoP54_03457 ee05e5971d604eb2e977b49f4cf3f506 218 PIRSF PIRSF031890 2 218 3.1E-68 T 14-10-2018 IPR016985 Uncharacterised conserved protein UCP031890, Tim44-related PhaeoP54_03457 ee05e5971d604eb2e977b49f4cf3f506 218 SUPERFAMILY SSF54427 17 216 1.4E-50 T 14-10-2018 IPR032710 NTF2-like domain superfamily PhaeoP54_00557 260249c47bbd49ca480f4cbd4a29c0db 229 Gene3D G3DSA:1.10.8.10 178 225 1.3E-6 T 14-10-2018 PhaeoP54_00557 260249c47bbd49ca480f4cbd4a29c0db 229 Gene3D G3DSA:1.10.150.20 67 134 2.8E-19 T 14-10-2018 PhaeoP54_00557 260249c47bbd49ca480f4cbd4a29c0db 229 Gene3D G3DSA:2.40.50.140 1 64 1.7E-20 T 14-10-2018 PhaeoP54_00557 260249c47bbd49ca480f4cbd4a29c0db 229 Pfam PF14520 Helix-hairpin-helix domain 73 130 1.4E-12 T 14-10-2018 PhaeoP54_00557 260249c47bbd49ca480f4cbd4a29c0db 229 Pfam PF01330 RuvA N terminal domain 2 62 1.1E-16 T 14-10-2018 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 PhaeoP54_00557 260249c47bbd49ca480f4cbd4a29c0db 229 Pfam PF07499 RuvA, C-terminal domain 184 225 2.5E-6 T 14-10-2018 IPR011114 Holliday junction DNA helicase RuvA, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 PhaeoP54_00557 260249c47bbd49ca480f4cbd4a29c0db 229 SUPERFAMILY SSF46929 183 227 1.05E-7 T 14-10-2018 IPR036267 RuvA, C-terminal domain superfamily PhaeoP54_00557 260249c47bbd49ca480f4cbd4a29c0db 229 SUPERFAMILY SSF50249 2 63 9.14E-16 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold PhaeoP54_00557 260249c47bbd49ca480f4cbd4a29c0db 229 SMART SM00278 108 127 21.0 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 PhaeoP54_00557 260249c47bbd49ca480f4cbd4a29c0db 229 SMART SM00278 73 92 59.0 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 PhaeoP54_00557 260249c47bbd49ca480f4cbd4a29c0db 229 SUPERFAMILY SSF47781 66 134 8.34E-19 T 14-10-2018 IPR010994 RuvA domain 2-like PhaeoP54_00557 260249c47bbd49ca480f4cbd4a29c0db 229 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 226 26.054 T 14-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 PhaeoP54_03099 e5129a2c8709b82dc334bdaf67b32b4a 316 Gene3D G3DSA:3.40.1010.20 12 285 2.0E-107 T 14-10-2018 PhaeoP54_03099 e5129a2c8709b82dc334bdaf67b32b4a 316 Gene3D G3DSA:3.40.50.11270 17 101 2.0E-107 T 14-10-2018 PhaeoP54_03099 e5129a2c8709b82dc334bdaf67b32b4a 316 Pfam PF02401 LytB protein 9 286 1.9E-87 T 14-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 PhaeoP54_03099 e5129a2c8709b82dc334bdaf67b32b4a 316 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 8 288 2.7E-99 T 14-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 PhaeoP54_03099 e5129a2c8709b82dc334bdaf67b32b4a 316 Gene3D G3DSA:3.40.1010.20 102 199 2.0E-107 T 14-10-2018 PhaeoP54_03099 e5129a2c8709b82dc334bdaf67b32b4a 316 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 6 290 36.62 T 14-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 PhaeoP54_02615 c41cb10ba8fa64ec80aed3048181fd7b 290 Pfam PF01418 Helix-turn-helix domain, rpiR family 9 81 5.4E-16 T 14-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 PhaeoP54_02615 c41cb10ba8fa64ec80aed3048181fd7b 290 SUPERFAMILY SSF53697 103 288 1.56E-17 T 14-10-2018 PhaeoP54_02615 c41cb10ba8fa64ec80aed3048181fd7b 290 SUPERFAMILY SSF46689 7 80 1.79E-16 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PhaeoP54_02615 c41cb10ba8fa64ec80aed3048181fd7b 290 Gene3D G3DSA:1.10.10.10 4 84 3.6E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_02615 c41cb10ba8fa64ec80aed3048181fd7b 290 Gene3D G3DSA:3.40.50.10490 100 283 1.7E-26 T 14-10-2018 PhaeoP54_02615 c41cb10ba8fa64ec80aed3048181fd7b 290 Pfam PF01380 SIS domain 136 259 1.1E-17 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 PhaeoP54_03243 1cb2c97354cbbce897465306e0ae9637 217 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 60 74 - T 14-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 PhaeoP54_03243 1cb2c97354cbbce897465306e0ae9637 217 Gene3D G3DSA:3.30.2350.10 5 216 4.7E-71 T 14-10-2018 PhaeoP54_03243 1cb2c97354cbbce897465306e0ae9637 217 Pfam PF00849 RNA pseudouridylate synthase 23 168 1.1E-29 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 PhaeoP54_03243 1cb2c97354cbbce897465306e0ae9637 217 SUPERFAMILY SSF55120 6 215 1.92E-63 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 PhaeoP54_03243 1cb2c97354cbbce897465306e0ae9637 217 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 6 214 1.9E-60 T 14-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 PhaeoP54_02043 25b7e541d9855c23dda2397b4edb8edf 464 Pfam PF01554 MatE 26 184 7.0E-32 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 PhaeoP54_02043 25b7e541d9855c23dda2397b4edb8edf 464 Pfam PF01554 MatE 250 416 4.8E-28 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 PhaeoP54_02043 25b7e541d9855c23dda2397b4edb8edf 464 PIRSF PIRSF006603 17 462 4.9E-70 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 PhaeoP54_02043 25b7e541d9855c23dda2397b4edb8edf 464 TIGRFAM TIGR00797 matE: MATE efflux family protein 26 429 1.4E-79 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 PhaeoP54_02608 74361028d109d27b862f215a51f538a3 592 SUPERFAMILY SSF55874 429 558 7.34E-6 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PhaeoP54_02608 74361028d109d27b862f215a51f538a3 592 Pfam PF07568 Histidine kinase 371 443 4.3E-22 T 14-10-2018 IPR011495 Signal transduction histidine kinase, subgroup 2, dimerisation and phosphoacceptor domain PhaeoP54_02608 74361028d109d27b862f215a51f538a3 592 Pfam PF14501 GHKL domain 469 565 2.3E-6 T 14-10-2018 IPR032834 Sensor histidine kinase NatK, C-terminal domain PhaeoP54_02608 74361028d109d27b862f215a51f538a3 592 Gene3D G3DSA:3.30.565.10 428 577 1.4E-13 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PhaeoP54_02608 74361028d109d27b862f215a51f538a3 592 Gene3D G3DSA:3.30.450.20 334 423 1.2E-9 T 14-10-2018 PhaeoP54_01708 1c33e624b5bbb338c12f9c1e61c26cb7 234 SUPERFAMILY SSF52540 3 218 1.7E-55 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_01708 1c33e624b5bbb338c12f9c1e61c26cb7 234 Pfam PF00005 ABC transporter 22 160 1.2E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PhaeoP54_01708 1c33e624b5bbb338c12f9c1e61c26cb7 234 Gene3D G3DSA:3.40.50.300 2 233 3.4E-54 T 14-10-2018 PhaeoP54_01708 1c33e624b5bbb338c12f9c1e61c26cb7 234 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PhaeoP54_01708 1c33e624b5bbb338c12f9c1e61c26cb7 234 SMART SM00382 28 213 3.7E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_02365 33ec2942ec87e58a824186b36742e36e 691 TIGRFAM TIGR00339 sopT: sulfate adenylyltransferase 138 506 6.2E-140 T 14-10-2018 IPR002650 Sulphate adenylyltransferase GO:0000103|GO:0004781 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 PhaeoP54_02365 33ec2942ec87e58a824186b36742e36e 691 SUPERFAMILY SSF88697 130 287 2.68E-51 T 14-10-2018 IPR015947 PUA-like superfamily PhaeoP54_02365 33ec2942ec87e58a824186b36742e36e 691 Pfam PF14306 PUA-like domain 131 281 4.1E-50 T 14-10-2018 IPR025980 ATP-sulfurylase PUA-like domain KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 PhaeoP54_02365 33ec2942ec87e58a824186b36742e36e 691 Gene3D G3DSA:3.10.400.10 130 281 1.4E-52 T 14-10-2018 PhaeoP54_02365 33ec2942ec87e58a824186b36742e36e 691 SUPERFAMILY SSF52540 513 686 1.42E-32 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_02365 33ec2942ec87e58a824186b36742e36e 691 Gene3D G3DSA:1.10.10.10 12 94 4.1E-5 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_02365 33ec2942ec87e58a824186b36742e36e 691 SUPERFAMILY SSF52374 289 509 1.08E-83 T 14-10-2018 PhaeoP54_02365 33ec2942ec87e58a824186b36742e36e 691 Gene3D G3DSA:3.40.50.620 288 507 6.0E-98 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PhaeoP54_02365 33ec2942ec87e58a824186b36742e36e 691 Gene3D G3DSA:3.40.50.300 508 690 2.0E-66 T 14-10-2018 PhaeoP54_02365 33ec2942ec87e58a824186b36742e36e 691 Pfam PF13412 Winged helix-turn-helix DNA-binding 15 59 1.3E-6 T 14-10-2018 PhaeoP54_02365 33ec2942ec87e58a824186b36742e36e 691 Pfam PF01583 Adenylylsulphate kinase 514 669 1.7E-60 T 14-10-2018 PhaeoP54_02365 33ec2942ec87e58a824186b36742e36e 691 Hamap MF_00065 Adenylyl-sulfate kinase [cysC]. 513 687 31.94 T 14-10-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 PhaeoP54_02365 33ec2942ec87e58a824186b36742e36e 691 TIGRFAM TIGR00455 apsK: adenylyl-sulfate kinase 510 680 6.2E-58 T 14-10-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 PhaeoP54_02365 33ec2942ec87e58a824186b36742e36e 691 Pfam PF01747 ATP-sulfurylase 292 506 4.8E-88 T 14-10-2018 IPR024951 Sulphate adenylyltransferase catalytic domain GO:0004781 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 PhaeoP54_02305 6b6550a77c71dbd808b9dcf0153c5daa 308 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 52 71 2.7E-26 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 PhaeoP54_02305 6b6550a77c71dbd808b9dcf0153c5daa 308 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 271 294 2.7E-26 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 PhaeoP54_02305 6b6550a77c71dbd808b9dcf0153c5daa 308 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 134 145 2.7E-26 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 PhaeoP54_02305 6b6550a77c71dbd808b9dcf0153c5daa 308 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 259 268 2.7E-26 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 PhaeoP54_02305 6b6550a77c71dbd808b9dcf0153c5daa 308 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 52 59 - T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 PhaeoP54_02305 6b6550a77c71dbd808b9dcf0153c5daa 308 Gene3D G3DSA:3.40.50.1370 10 302 2.4E-114 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 PhaeoP54_02305 6b6550a77c71dbd808b9dcf0153c5daa 308 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 153 304 2.8E-50 T 14-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 PhaeoP54_02305 6b6550a77c71dbd808b9dcf0153c5daa 308 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 1 307 77.196 T 14-10-2018 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 PhaeoP54_02305 6b6550a77c71dbd808b9dcf0153c5daa 308 Gene3D G3DSA:3.40.50.1370 137 293 2.4E-114 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 PhaeoP54_02305 6b6550a77c71dbd808b9dcf0153c5daa 308 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 3 147 1.8E-46 T 14-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 PhaeoP54_02305 6b6550a77c71dbd808b9dcf0153c5daa 308 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 3 306 3.9E-112 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 PhaeoP54_02305 6b6550a77c71dbd808b9dcf0153c5daa 308 PRINTS PR00102 Ornithine carbamoyltransferase signature 222 232 5.3E-29 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 PhaeoP54_02305 6b6550a77c71dbd808b9dcf0153c5daa 308 PRINTS PR00102 Ornithine carbamoyltransferase signature 50 64 5.3E-29 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 PhaeoP54_02305 6b6550a77c71dbd808b9dcf0153c5daa 308 PRINTS PR00102 Ornithine carbamoyltransferase signature 83 96 5.3E-29 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 PhaeoP54_02305 6b6550a77c71dbd808b9dcf0153c5daa 308 PRINTS PR00102 Ornithine carbamoyltransferase signature 123 137 5.3E-29 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 PhaeoP54_02305 6b6550a77c71dbd808b9dcf0153c5daa 308 PRINTS PR00102 Ornithine carbamoyltransferase signature 285 296 5.3E-29 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 PhaeoP54_02305 6b6550a77c71dbd808b9dcf0153c5daa 308 SUPERFAMILY SSF53671 1 307 2.23E-103 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 PhaeoP54_00945 244529e48e81a22dcf530066c00eacd8 113 Gene3D G3DSA:2.170.150.40 1 112 6.1E-36 T 14-10-2018 PhaeoP54_00945 244529e48e81a22dcf530066c00eacd8 113 Pfam PF04248 Domain of unknown function (DUF427) 15 104 1.4E-27 T 14-10-2018 IPR007361 Domain of unknown function DUF427 PhaeoP54_03353 12f33360374b7088061335b5985d1a54 642 SUPERFAMILY SSF52922 496 633 5.63E-33 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 PhaeoP54_03353 12f33360374b7088061335b5985d1a54 642 Gene3D G3DSA:3.40.50.920 501 634 3.6E-33 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 PhaeoP54_03353 12f33360374b7088061335b5985d1a54 642 Pfam PF02779 Transketolase, pyrimidine binding domain 324 485 1.6E-35 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain PhaeoP54_03353 12f33360374b7088061335b5985d1a54 642 ProSitePatterns PS00802 Transketolase signature 2. 430 446 - T 14-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 PhaeoP54_03353 12f33360374b7088061335b5985d1a54 642 ProSitePatterns PS00801 Transketolase signature 1. 35 54 - T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 PhaeoP54_03353 12f33360374b7088061335b5985d1a54 642 SMART SM00861 324 489 3.9E-59 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain PhaeoP54_03353 12f33360374b7088061335b5985d1a54 642 Gene3D G3DSA:3.40.50.970 321 498 5.5E-65 T 14-10-2018 PhaeoP54_03353 12f33360374b7088061335b5985d1a54 642 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 12 632 1.3E-235 T 14-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 PhaeoP54_03353 12f33360374b7088061335b5985d1a54 642 SUPERFAMILY SSF52518 322 510 1.59E-55 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold PhaeoP54_03353 12f33360374b7088061335b5985d1a54 642 Pfam PF02780 Transketolase, C-terminal domain 501 624 4.3E-28 T 14-10-2018 IPR033248 Transketolase, C-terminal domain PhaeoP54_03353 12f33360374b7088061335b5985d1a54 642 SUPERFAMILY SSF52518 7 386 5.71E-72 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold PhaeoP54_03353 12f33360374b7088061335b5985d1a54 642 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 10 287 6.2E-114 T 14-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 PhaeoP54_03353 12f33360374b7088061335b5985d1a54 642 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 9 633 43.63 T 14-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 PhaeoP54_03977 a06c628273b3f2c731d6b8ce756e8554 585 Pfam PF10088 Uncharacterised protein conserved in bacteria (DUF2326) 450 585 5.2E-39 T 14-10-2018 IPR018760 Protein of unknown function DUF2326 PhaeoP54_03977 a06c628273b3f2c731d6b8ce756e8554 585 Gene3D G3DSA:3.40.50.300 8 316 3.9E-8 T 14-10-2018 PhaeoP54_00685 be6c698dcf33dd5e2c7167ed97af5f70 328 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 2 114 1.6E-21 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 PhaeoP54_00685 be6c698dcf33dd5e2c7167ed97af5f70 328 SUPERFAMILY SSF51735 2 146 1.78E-40 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PhaeoP54_00685 be6c698dcf33dd5e2c7167ed97af5f70 328 TIGRFAM TIGR04380 myo_inos_iolG: inositol 2-dehydrogenase 1 326 2.3E-132 T 14-10-2018 IPR030827 Inositol 2-dehydrogenase PhaeoP54_00685 be6c698dcf33dd5e2c7167ed97af5f70 328 SUPERFAMILY SSF55347 124 289 1.34E-31 T 14-10-2018 PhaeoP54_00685 be6c698dcf33dd5e2c7167ed97af5f70 328 Gene3D G3DSA:3.30.360.10 138 267 6.0E-103 T 14-10-2018 PhaeoP54_00685 be6c698dcf33dd5e2c7167ed97af5f70 328 Gene3D G3DSA:3.40.50.720 5 322 6.0E-103 T 14-10-2018 PhaeoP54_00685 be6c698dcf33dd5e2c7167ed97af5f70 328 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 136 236 4.2E-7 T 14-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 PhaeoP54_01549 e40f1470949c9c9a62b981348756a791 333 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 27 87 4.1E-10 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 PhaeoP54_01549 e40f1470949c9c9a62b981348756a791 333 Gene3D G3DSA:3.90.180.10 11 324 9.0E-96 T 14-10-2018 PhaeoP54_01549 e40f1470949c9c9a62b981348756a791 333 SUPERFAMILY SSF50129 1 140 1.32E-36 T 14-10-2018 IPR011032 GroES-like superfamily PhaeoP54_01549 e40f1470949c9c9a62b981348756a791 333 Gene3D G3DSA:3.40.50.720 123 273 9.0E-96 T 14-10-2018 PhaeoP54_01549 e40f1470949c9c9a62b981348756a791 333 Pfam PF00107 Zinc-binding dehydrogenase 151 279 8.2E-25 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 PhaeoP54_01549 e40f1470949c9c9a62b981348756a791 333 SMART SM00829 10 328 1.4E-49 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 PhaeoP54_01549 e40f1470949c9c9a62b981348756a791 333 SUPERFAMILY SSF51735 117 292 8.78E-44 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PhaeoP54_01545 862c8ce23185bbc2a79bdfe0157d28d8 257 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 7 226 5.3E-97 T 14-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PhaeoP54_01545 862c8ce23185bbc2a79bdfe0157d28d8 257 Gene3D G3DSA:1.10.287.610 102 152 2.6E-17 T 14-10-2018 PhaeoP54_01545 862c8ce23185bbc2a79bdfe0157d28d8 257 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 159 183 - T 14-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 PhaeoP54_01545 862c8ce23185bbc2a79bdfe0157d28d8 257 SUPERFAMILY SSF52313 8 234 1.1E-89 T 14-10-2018 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily PhaeoP54_01545 862c8ce23185bbc2a79bdfe0157d28d8 257 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 8 19 - T 14-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 PhaeoP54_01545 862c8ce23185bbc2a79bdfe0157d28d8 257 Pfam PF00318 Ribosomal protein S2 11 225 1.5E-91 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PhaeoP54_01545 862c8ce23185bbc2a79bdfe0157d28d8 257 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 4 226 40.3 T 14-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PhaeoP54_01545 862c8ce23185bbc2a79bdfe0157d28d8 257 PRINTS PR00395 Ribosomal protein S2 signature 8 26 1.5E-38 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PhaeoP54_01545 862c8ce23185bbc2a79bdfe0157d28d8 257 PRINTS PR00395 Ribosomal protein S2 signature 159 176 1.5E-38 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PhaeoP54_01545 862c8ce23185bbc2a79bdfe0157d28d8 257 PRINTS PR00395 Ribosomal protein S2 signature 176 187 1.5E-38 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PhaeoP54_01545 862c8ce23185bbc2a79bdfe0157d28d8 257 PRINTS PR00395 Ribosomal protein S2 signature 89 106 1.5E-38 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PhaeoP54_01545 862c8ce23185bbc2a79bdfe0157d28d8 257 PRINTS PR00395 Ribosomal protein S2 signature 39 48 1.5E-38 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PhaeoP54_01545 862c8ce23185bbc2a79bdfe0157d28d8 257 PRINTS PR00395 Ribosomal protein S2 signature 197 211 1.5E-38 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PhaeoP54_00722 274b1484d9b1e917431676d2d9ba9ade 338 SUPERFAMILY SSF52733 14 336 2.62E-110 T 14-10-2018 IPR036087 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like superfamily GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 PhaeoP54_00722 274b1484d9b1e917431676d2d9ba9ade 338 Hamap MF_00230 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [cobT]. 20 337 33.976 T 14-10-2018 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 PhaeoP54_00722 274b1484d9b1e917431676d2d9ba9ade 338 Gene3D G3DSA:3.40.50.10210 64 318 1.7E-106 T 14-10-2018 PhaeoP54_00722 274b1484d9b1e917431676d2d9ba9ade 338 Gene3D G3DSA:1.10.1610.10 21 327 1.7E-106 T 14-10-2018 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 PhaeoP54_00722 274b1484d9b1e917431676d2d9ba9ade 338 Pfam PF02277 Phosphoribosyltransferase 20 335 1.2E-115 T 14-10-2018 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 PhaeoP54_00722 274b1484d9b1e917431676d2d9ba9ade 338 TIGRFAM TIGR03160 cobT_DBIPRT: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 21 335 1.6E-117 T 14-10-2018 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 PhaeoP54_03904 464167b325ce64de12a503216480e7b3 282 Gene3D G3DSA:2.30.30.240 26 137 1.8E-21 T 14-10-2018 PhaeoP54_03904 464167b325ce64de12a503216480e7b3 282 Gene3D G3DSA:2.30.30.240 188 278 1.7E-18 T 14-10-2018 PhaeoP54_03904 464167b325ce64de12a503216480e7b3 282 Pfam PF05239 PRC-barrel domain 198 250 2.0E-7 T 14-10-2018 IPR027275 PRC-barrel domain PhaeoP54_03904 464167b325ce64de12a503216480e7b3 282 Pfam PF05239 PRC-barrel domain 36 112 7.3E-10 T 14-10-2018 IPR027275 PRC-barrel domain PhaeoP54_03904 464167b325ce64de12a503216480e7b3 282 SUPERFAMILY SSF50346 196 252 2.35E-8 T 14-10-2018 IPR011033 PRC-barrel-like superfamily PhaeoP54_03904 464167b325ce64de12a503216480e7b3 282 SUPERFAMILY SSF50346 36 112 2.75E-9 T 14-10-2018 IPR011033 PRC-barrel-like superfamily PhaeoP54_03427 f5f92bf02ede8c1a3f1fe3b28981e12f 408 Gene3D G3DSA:3.40.50.1100 20 314 9.1E-90 T 14-10-2018 PhaeoP54_03427 f5f92bf02ede8c1a3f1fe3b28981e12f 408 Gene3D G3DSA:3.40.50.1100 51 147 9.1E-90 T 14-10-2018 PhaeoP54_03427 f5f92bf02ede8c1a3f1fe3b28981e12f 408 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 22 303 1.1E-68 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme PhaeoP54_03427 f5f92bf02ede8c1a3f1fe3b28981e12f 408 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 316 407 2.2E-19 T 14-10-2018 IPR001721 Threonine dehydratase, ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 PhaeoP54_03427 f5f92bf02ede8c1a3f1fe3b28981e12f 408 Gene3D G3DSA:3.40.1020.10 315 408 4.9E-11 T 14-10-2018 IPR038110 Threonine dehydratase, ACT-like domain superfamily KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 PhaeoP54_03427 f5f92bf02ede8c1a3f1fe3b28981e12f 408 TIGRFAM TIGR02079 THD1: threonine dehydratase 9 408 1.9E-156 T 14-10-2018 IPR011820 L-threonine dehydratase biosynthetic IlvA GO:0004794 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 PhaeoP54_03427 f5f92bf02ede8c1a3f1fe3b28981e12f 408 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 43 56 - T 14-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 PhaeoP54_03427 f5f92bf02ede8c1a3f1fe3b28981e12f 408 SUPERFAMILY SSF53686 11 349 1.44E-87 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme PhaeoP54_03427 f5f92bf02ede8c1a3f1fe3b28981e12f 408 SUPERFAMILY SSF55021 327 407 4.58E-15 T 14-10-2018 PhaeoP54_00328 c3f55d90c8de2f62476c91cfc00de46f 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 1.9E-78 T 14-10-2018 PhaeoP54_00328 c3f55d90c8de2f62476c91cfc00de46f 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 429 449 1.9E-78 T 14-10-2018 PhaeoP54_00328 c3f55d90c8de2f62476c91cfc00de46f 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 341 362 1.9E-78 T 14-10-2018 PhaeoP54_00328 c3f55d90c8de2f62476c91cfc00de46f 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 173 198 1.9E-78 T 14-10-2018 PhaeoP54_00328 c3f55d90c8de2f62476c91cfc00de46f 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 407 422 1.9E-78 T 14-10-2018 PhaeoP54_00328 c3f55d90c8de2f62476c91cfc00de46f 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 135 144 1.9E-78 T 14-10-2018 PhaeoP54_00328 c3f55d90c8de2f62476c91cfc00de46f 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 263 277 1.9E-78 T 14-10-2018 PhaeoP54_00328 c3f55d90c8de2f62476c91cfc00de46f 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 38 53 1.9E-78 T 14-10-2018 PhaeoP54_00328 c3f55d90c8de2f62476c91cfc00de46f 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 306 313 1.9E-78 T 14-10-2018 PhaeoP54_00328 c3f55d90c8de2f62476c91cfc00de46f 465 SUPERFAMILY SSF55424 341 462 5.5E-41 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 PhaeoP54_00328 c3f55d90c8de2f62476c91cfc00de46f 465 Gene3D G3DSA:3.30.390.30 344 465 2.9E-43 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 PhaeoP54_00328 c3f55d90c8de2f62476c91cfc00de46f 465 Gene3D G3DSA:3.50.50.60 5 326 4.2E-118 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PhaeoP54_00328 c3f55d90c8de2f62476c91cfc00de46f 465 SUPERFAMILY SSF51905 2 367 7.63E-70 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PhaeoP54_00328 c3f55d90c8de2f62476c91cfc00de46f 465 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 3 464 5.6E-170 T 14-10-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 PhaeoP54_00328 c3f55d90c8de2f62476c91cfc00de46f 465 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 4 326 1.9E-72 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PhaeoP54_00328 c3f55d90c8de2f62476c91cfc00de46f 465 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 39 49 - T 14-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 PhaeoP54_00328 c3f55d90c8de2f62476c91cfc00de46f 465 Gene3D G3DSA:3.50.50.60 144 269 4.2E-118 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PhaeoP54_00328 c3f55d90c8de2f62476c91cfc00de46f 465 PIRSF PIRSF000350 1 460 3.6E-89 T 14-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 PhaeoP54_00328 c3f55d90c8de2f62476c91cfc00de46f 465 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 345 455 3.9E-37 T 14-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 PhaeoP54_00328 c3f55d90c8de2f62476c91cfc00de46f 465 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 6.8E-39 T 14-10-2018 PhaeoP54_00328 c3f55d90c8de2f62476c91cfc00de46f 465 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 132 150 6.8E-39 T 14-10-2018 PhaeoP54_00328 c3f55d90c8de2f62476c91cfc00de46f 465 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 262 278 6.8E-39 T 14-10-2018 PhaeoP54_00328 c3f55d90c8de2f62476c91cfc00de46f 465 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 291 313 6.8E-39 T 14-10-2018 PhaeoP54_00328 c3f55d90c8de2f62476c91cfc00de46f 465 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 173 191 6.8E-39 T 14-10-2018 PhaeoP54_02689 58fdb5b9d0a6280fdaca17039d3640cb 375 Gene3D G3DSA:3.40.50.10540 3 352 4.8E-144 T 14-10-2018 IPR023606 CoA-transferase family III domain superfamily PhaeoP54_02689 58fdb5b9d0a6280fdaca17039d3640cb 375 Pfam PF02515 CoA-transferase family III 4 365 1.0E-122 T 14-10-2018 IPR003673 CoA-transferase family III GO:0003824 PhaeoP54_02689 58fdb5b9d0a6280fdaca17039d3640cb 375 SUPERFAMILY SSF89796 1 365 8.63E-130 T 14-10-2018 IPR023606 CoA-transferase family III domain superfamily PhaeoP54_02689 58fdb5b9d0a6280fdaca17039d3640cb 375 Gene3D G3DSA:3.30.1540.10 228 319 4.8E-144 T 14-10-2018 PhaeoP54_02359 66e96591042dfb5bd347d7c023b8bd47 255 SUPERFAMILY SSF64438 4 254 9.16E-82 T 14-10-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic PhaeoP54_02359 66e96591042dfb5bd347d7c023b8bd47 255 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 19 253 1.4E-72 T 14-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase PhaeoP54_02359 66e96591042dfb5bd347d7c023b8bd47 255 Gene3D G3DSA:3.60.140.10 2 255 3.6E-85 T 14-10-2018 IPR038371 Multi-copper polyphenol oxidoreductase superfamily PhaeoP54_02359 66e96591042dfb5bd347d7c023b8bd47 255 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 35 243 6.6E-56 T 14-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase PhaeoP54_01272 7d2566b8af0a2fdc03870c920b10ab33 166 Gene3D G3DSA:2.30.110.10 2 165 1.9E-41 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 PhaeoP54_01272 7d2566b8af0a2fdc03870c920b10ab33 166 SUPERFAMILY SSF50475 14 160 1.23E-41 T 14-10-2018 PhaeoP54_01272 7d2566b8af0a2fdc03870c920b10ab33 166 Pfam PF01613 Flavin reductase like domain 22 161 1.4E-28 T 14-10-2018 IPR002563 Flavin reductase like domain GO:0010181 PhaeoP54_01272 7d2566b8af0a2fdc03870c920b10ab33 166 SMART SM00903 20 161 3.2E-51 T 14-10-2018 IPR002563 Flavin reductase like domain GO:0010181 PhaeoP54_00149 645ba9e445db11b9bbdc6e13b95cfcbf 433 PRINTS PR00083 Histidinol dehydrogenase signature 137 163 2.5E-85 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 PhaeoP54_00149 645ba9e445db11b9bbdc6e13b95cfcbf 433 PRINTS PR00083 Histidinol dehydrogenase signature 230 251 2.5E-85 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 PhaeoP54_00149 645ba9e445db11b9bbdc6e13b95cfcbf 433 PRINTS PR00083 Histidinol dehydrogenase signature 321 346 2.5E-85 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 PhaeoP54_00149 645ba9e445db11b9bbdc6e13b95cfcbf 433 PRINTS PR00083 Histidinol dehydrogenase signature 34 58 2.5E-85 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 PhaeoP54_00149 645ba9e445db11b9bbdc6e13b95cfcbf 433 PRINTS PR00083 Histidinol dehydrogenase signature 252 271 2.5E-85 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 PhaeoP54_00149 645ba9e445db11b9bbdc6e13b95cfcbf 433 PRINTS PR00083 Histidinol dehydrogenase signature 171 197 2.5E-85 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 PhaeoP54_00149 645ba9e445db11b9bbdc6e13b95cfcbf 433 PRINTS PR00083 Histidinol dehydrogenase signature 362 380 2.5E-85 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 PhaeoP54_00149 645ba9e445db11b9bbdc6e13b95cfcbf 433 PRINTS PR00083 Histidinol dehydrogenase signature 201 226 2.5E-85 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 PhaeoP54_00149 645ba9e445db11b9bbdc6e13b95cfcbf 433 SUPERFAMILY SSF53720 28 429 1.31E-86 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 PhaeoP54_00149 645ba9e445db11b9bbdc6e13b95cfcbf 433 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 230 262 - T 14-10-2018 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23 PhaeoP54_00149 645ba9e445db11b9bbdc6e13b95cfcbf 433 Gene3D G3DSA:3.40.50.1980 32 232 1.0E-121 T 14-10-2018 PhaeoP54_00149 645ba9e445db11b9bbdc6e13b95cfcbf 433 PIRSF PIRSF000099 5 431 5.1E-160 T 14-10-2018 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 PhaeoP54_00149 645ba9e445db11b9bbdc6e13b95cfcbf 433 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 34 427 1.8E-158 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 PhaeoP54_00149 645ba9e445db11b9bbdc6e13b95cfcbf 433 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 6 428 41.093 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 PhaeoP54_00149 645ba9e445db11b9bbdc6e13b95cfcbf 433 Pfam PF00815 Histidinol dehydrogenase 24 428 4.1E-166 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 PhaeoP54_00149 645ba9e445db11b9bbdc6e13b95cfcbf 433 Gene3D G3DSA:3.40.50.1980 234 350 1.0E-121 T 14-10-2018 PhaeoP54_01643 7850c13c85b68f3bd478c87d52aab4bd 1083 PRINTS PR00996 Glutamate methyltransferase family signature 269 281 7.3E-30 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 PhaeoP54_01643 7850c13c85b68f3bd478c87d52aab4bd 1083 PRINTS PR00996 Glutamate methyltransferase family signature 232 245 7.3E-30 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 PhaeoP54_01643 7850c13c85b68f3bd478c87d52aab4bd 1083 PRINTS PR00996 Glutamate methyltransferase family signature 345 361 7.3E-30 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 PhaeoP54_01643 7850c13c85b68f3bd478c87d52aab4bd 1083 PRINTS PR00996 Glutamate methyltransferase family signature 411 425 7.3E-30 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 PhaeoP54_01643 7850c13c85b68f3bd478c87d52aab4bd 1083 PRINTS PR00996 Glutamate methyltransferase family signature 307 327 7.3E-30 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 PhaeoP54_01643 7850c13c85b68f3bd478c87d52aab4bd 1083 PRINTS PR00996 Glutamate methyltransferase family signature 430 453 7.3E-30 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 PhaeoP54_01643 7850c13c85b68f3bd478c87d52aab4bd 1083 Pfam PF01739 CheR methyltransferase, SAM binding domain 277 461 1.2E-53 T 14-10-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal PhaeoP54_01643 7850c13c85b68f3bd478c87d52aab4bd 1083 Gene3D G3DSA:3.30.450.20 961 1076 2.6E-24 T 14-10-2018 PhaeoP54_01643 7850c13c85b68f3bd478c87d52aab4bd 1083 SMART SM00091 836 903 1.0 T 14-10-2018 IPR000014 PAS domain PhaeoP54_01643 7850c13c85b68f3bd478c87d52aab4bd 1083 SMART SM00091 964 1033 0.039 T 14-10-2018 IPR000014 PAS domain PhaeoP54_01643 7850c13c85b68f3bd478c87d52aab4bd 1083 SMART SM00091 726 791 8.1 T 14-10-2018 IPR000014 PAS domain PhaeoP54_01643 7850c13c85b68f3bd478c87d52aab4bd 1083 Gene3D G3DSA:3.30.450.20 708 830 2.1E-6 T 14-10-2018 PhaeoP54_01643 7850c13c85b68f3bd478c87d52aab4bd 1083 SUPERFAMILY SSF53335 277 462 2.94E-46 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PhaeoP54_01643 7850c13c85b68f3bd478c87d52aab4bd 1083 Gene3D G3DSA:3.40.50.150 275 473 1.0E-62 T 14-10-2018 PhaeoP54_01643 7850c13c85b68f3bd478c87d52aab4bd 1083 Gene3D G3DSA:3.30.450.20 834 960 8.9E-8 T 14-10-2018 PhaeoP54_01643 7850c13c85b68f3bd478c87d52aab4bd 1083 SUPERFAMILY SSF52738 9 197 7.45E-56 T 14-10-2018 IPR035909 Methylesterase CheB, C-terminal PhaeoP54_01643 7850c13c85b68f3bd478c87d52aab4bd 1083 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 976 1080 2.1E-9 T 14-10-2018 IPR000014 PAS domain PhaeoP54_01643 7850c13c85b68f3bd478c87d52aab4bd 1083 Pfam PF13596 PAS domain 731 830 9.5E-7 T 14-10-2018 PhaeoP54_01643 7850c13c85b68f3bd478c87d52aab4bd 1083 SUPERFAMILY SSF57997 635 721 3.4E-5 T 14-10-2018 PhaeoP54_01643 7850c13c85b68f3bd478c87d52aab4bd 1083 SUPERFAMILY SSF47757 204 278 1.7E-12 T 14-10-2018 PhaeoP54_01643 7850c13c85b68f3bd478c87d52aab4bd 1083 SUPERFAMILY SSF55785 949 1076 7.09E-20 T 14-10-2018 IPR035965 PAS domain superfamily PhaeoP54_01643 7850c13c85b68f3bd478c87d52aab4bd 1083 Pfam PF03705 CheR methyltransferase, all-alpha domain 216 263 3.7E-11 T 14-10-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal PhaeoP54_01643 7850c13c85b68f3bd478c87d52aab4bd 1083 Pfam PF08447 PAS fold 989 1074 4.7E-17 T 14-10-2018 IPR013655 PAS fold-3 GO:0005515 PhaeoP54_01643 7850c13c85b68f3bd478c87d52aab4bd 1083 Pfam PF01339 CheB methylesterase 12 188 8.9E-54 T 14-10-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 PhaeoP54_01643 7850c13c85b68f3bd478c87d52aab4bd 1083 Gene3D G3DSA:3.40.50.180 4 193 1.2E-61 T 14-10-2018 IPR035909 Methylesterase CheB, C-terminal PhaeoP54_01643 7850c13c85b68f3bd478c87d52aab4bd 1083 SMART SM00138 210 471 5.3E-77 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 PhaeoP54_01643 7850c13c85b68f3bd478c87d52aab4bd 1083 SUPERFAMILY SSF55785 841 955 1.93E-5 T 14-10-2018 IPR035965 PAS domain superfamily PhaeoP54_01643 7850c13c85b68f3bd478c87d52aab4bd 1083 SUPERFAMILY SSF55785 720 827 5.58E-7 T 14-10-2018 IPR035965 PAS domain superfamily PhaeoP54_01969 0cbe60655463f46f5a3967a8d416be26 224 Pfam PF08856 Protein of unknown function (DUF1826) 20 202 7.2E-54 T 14-10-2018 IPR014955 Protein of unknown function DUF1826 PhaeoP54_02725 2338930110e29c9965272c6c9549c601 223 Pfam PF06080 Protein of unknown function (DUF938) 21 222 7.6E-49 T 14-10-2018 IPR010342 Protein of unknown function DUF938 PhaeoP54_02725 2338930110e29c9965272c6c9549c601 223 Gene3D G3DSA:3.40.50.150 18 222 2.2E-25 T 14-10-2018 PhaeoP54_02725 2338930110e29c9965272c6c9549c601 223 SUPERFAMILY SSF53335 32 219 2.01E-29 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PhaeoP54_01911 52aae73c5f9913c89f868e3feac5ecd0 471 Pfam PF02913 FAD linked oxidases, C-terminal domain 215 457 2.6E-36 T 14-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 PhaeoP54_01911 52aae73c5f9913c89f868e3feac5ecd0 471 SUPERFAMILY SSF56176 10 215 5.61E-58 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 PhaeoP54_01911 52aae73c5f9913c89f868e3feac5ecd0 471 SUPERFAMILY SSF55103 189 461 5.56E-41 T 14-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 PhaeoP54_01911 52aae73c5f9913c89f868e3feac5ecd0 471 Gene3D G3DSA:1.10.45.10 418 458 2.1E-10 T 14-10-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 PhaeoP54_01911 52aae73c5f9913c89f868e3feac5ecd0 471 Pfam PF01565 FAD binding domain 42 177 1.7E-33 T 14-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 PhaeoP54_01911 52aae73c5f9913c89f868e3feac5ecd0 471 Gene3D G3DSA:3.30.465.10 93 214 1.4E-41 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 PhaeoP54_01911 52aae73c5f9913c89f868e3feac5ecd0 471 Gene3D G3DSA:3.30.70.2740 336 417 3.3E-14 T 14-10-2018 PhaeoP54_01911 52aae73c5f9913c89f868e3feac5ecd0 471 Gene3D G3DSA:3.30.43.10 4 91 2.9E-12 T 14-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 PhaeoP54_01911 52aae73c5f9913c89f868e3feac5ecd0 471 Gene3D G3DSA:3.30.70.2190 215 333 9.0E-23 T 14-10-2018 PhaeoP54_03304 f8fc591763b48e62de0186427e8de23d 246 Gene3D G3DSA:3.40.50.300 1 246 8.5E-55 T 14-10-2018 PhaeoP54_03304 f8fc591763b48e62de0186427e8de23d 246 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 224 245 7.8E-5 T 14-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal PhaeoP54_03304 f8fc591763b48e62de0186427e8de23d 246 TIGRFAM TIGR03411 urea_trans_UrtD: urea ABC transporter, ATP-binding protein UrtD 4 246 2.1E-105 T 14-10-2018 IPR017781 ABC transporter, urea, ATP-binding protein, UrtD PhaeoP54_03304 f8fc591763b48e62de0186427e8de23d 246 SUPERFAMILY SSF52540 2 244 2.36E-55 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_03304 f8fc591763b48e62de0186427e8de23d 246 SMART SM00382 29 222 6.3E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_03304 f8fc591763b48e62de0186427e8de23d 246 Pfam PF00005 ABC transporter 21 175 4.5E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PhaeoP54_01353 9c009a5fcc11fb1e5dd9b5c6e971da2f 533 SUPERFAMILY SSF56801 5 510 4.71E-139 T 14-10-2018 PhaeoP54_01353 9c009a5fcc11fb1e5dd9b5c6e971da2f 533 Gene3D G3DSA:3.30.300.30 411 528 8.1E-27 T 14-10-2018 PhaeoP54_01353 9c009a5fcc11fb1e5dd9b5c6e971da2f 533 PRINTS PR00154 AMP-binding signature 172 180 8.7E-5 T 14-10-2018 IPR020459 AMP-binding PhaeoP54_01353 9c009a5fcc11fb1e5dd9b5c6e971da2f 533 PRINTS PR00154 AMP-binding signature 160 171 8.7E-5 T 14-10-2018 IPR020459 AMP-binding PhaeoP54_01353 9c009a5fcc11fb1e5dd9b5c6e971da2f 533 ProSitePatterns PS00455 Putative AMP-binding domain signature. 165 176 - T 14-10-2018 IPR020845 AMP-binding, conserved site PhaeoP54_01353 9c009a5fcc11fb1e5dd9b5c6e971da2f 533 Pfam PF13193 AMP-binding enzyme C-terminal domain 424 500 6.5E-16 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain PhaeoP54_01353 9c009a5fcc11fb1e5dd9b5c6e971da2f 533 Pfam PF00501 AMP-binding enzyme 13 415 1.3E-95 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 PhaeoP54_01353 9c009a5fcc11fb1e5dd9b5c6e971da2f 533 Gene3D G3DSA:3.40.50.12780 2 408 1.9E-114 T 14-10-2018 PhaeoP54_03472 c4351af675474f1cd0e0ad9e33342211 342 Pfam PF01636 Phosphotransferase enzyme family 34 257 2.2E-28 T 14-10-2018 IPR002575 Aminoglycoside phosphotransferase PhaeoP54_03472 c4351af675474f1cd0e0ad9e33342211 342 Gene3D G3DSA:3.30.200.20 11 102 8.0E-33 T 14-10-2018 PhaeoP54_03472 c4351af675474f1cd0e0ad9e33342211 342 Gene3D G3DSA:3.90.1200.10 103 342 1.9E-76 T 14-10-2018 PhaeoP54_03472 c4351af675474f1cd0e0ad9e33342211 342 SUPERFAMILY SSF56112 18 322 1.39E-46 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily PhaeoP54_02338 a8e38995e20582687a9a95391c4802ae 592 Gene3D G3DSA:2.40.50.140 1 107 1.1E-34 T 14-10-2018 PhaeoP54_02338 a8e38995e20582687a9a95391c4802ae 592 Pfam PF01336 OB-fold nucleic acid binding domain 21 104 4.6E-15 T 14-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 PhaeoP54_02338 a8e38995e20582687a9a95391c4802ae 592 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 5 586 8.8E-181 T 14-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 PhaeoP54_02338 a8e38995e20582687a9a95391c4802ae 592 Gene3D G3DSA:3.30.1360.30 278 424 1.1E-159 T 14-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 PhaeoP54_02338 a8e38995e20582687a9a95391c4802ae 592 SUPERFAMILY SSF55261 295 423 3.05E-32 T 14-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 PhaeoP54_02338 a8e38995e20582687a9a95391c4802ae 592 Pfam PF00152 tRNA synthetases class II (D, K and N) 122 561 1.0E-93 T 14-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 PhaeoP54_02338 a8e38995e20582687a9a95391c4802ae 592 SUPERFAMILY SSF50249 4 107 2.1E-31 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold PhaeoP54_02338 a8e38995e20582687a9a95391c4802ae 592 SUPERFAMILY SSF55681 112 589 4.58E-95 T 14-10-2018 PhaeoP54_02338 a8e38995e20582687a9a95391c4802ae 592 Gene3D G3DSA:3.30.930.10 121 585 1.1E-159 T 14-10-2018 PhaeoP54_02338 a8e38995e20582687a9a95391c4802ae 592 Pfam PF02938 GAD domain 314 404 4.6E-6 T 14-10-2018 IPR029351 GAD domain Reactome: R-HSA-379726 PhaeoP54_02338 a8e38995e20582687a9a95391c4802ae 592 Hamap MF_00044 Aspartate--tRNA(Asp/Asn) ligase [aspS]. 4 588 29.215 T 14-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 PhaeoP54_02338 a8e38995e20582687a9a95391c4802ae 592 PRINTS PR01042 Aspartyl-tRNA synthetase signature 194 206 3.9E-21 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 PhaeoP54_02338 a8e38995e20582687a9a95391c4802ae 592 PRINTS PR01042 Aspartyl-tRNA synthetase signature 478 494 3.9E-21 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 PhaeoP54_02338 a8e38995e20582687a9a95391c4802ae 592 PRINTS PR01042 Aspartyl-tRNA synthetase signature 522 536 3.9E-21 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 PhaeoP54_02338 a8e38995e20582687a9a95391c4802ae 592 PRINTS PR01042 Aspartyl-tRNA synthetase signature 211 224 3.9E-21 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 PhaeoP54_02296 d9f7c5c6bab36155446b124287ee767d 325 Gene3D G3DSA:3.40.190.10 170 272 1.2E-18 T 14-10-2018 PhaeoP54_02296 d9f7c5c6bab36155446b124287ee767d 325 Gene3D G3DSA:1.10.10.10 6 93 9.5E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_02296 d9f7c5c6bab36155446b124287ee767d 325 SUPERFAMILY SSF53850 97 301 9.05E-20 T 14-10-2018 PhaeoP54_02296 d9f7c5c6bab36155446b124287ee767d 325 Gene3D G3DSA:3.40.190.10 97 278 1.2E-18 T 14-10-2018 PhaeoP54_02296 d9f7c5c6bab36155446b124287ee767d 325 SUPERFAMILY SSF46785 7 106 7.58E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_02296 d9f7c5c6bab36155446b124287ee767d 325 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 1.8E-18 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PhaeoP54_02296 d9f7c5c6bab36155446b124287ee767d 325 Pfam PF03466 LysR substrate binding domain 97 280 6.5E-19 T 14-10-2018 IPR005119 LysR, substrate-binding PhaeoP54_02465 c8919ef6438f61729d3464f01f20f4b7 350 Pfam PF12833 Helix-turn-helix domain 271 346 8.6E-16 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PhaeoP54_02465 c8919ef6438f61729d3464f01f20f4b7 350 SMART SM00342 263 345 1.8E-18 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PhaeoP54_02465 c8919ef6438f61729d3464f01f20f4b7 350 Gene3D G3DSA:1.10.10.60 261 349 2.3E-19 T 14-10-2018 PhaeoP54_02465 c8919ef6438f61729d3464f01f20f4b7 350 SUPERFAMILY SSF46689 299 347 2.2E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PhaeoP54_02465 c8919ef6438f61729d3464f01f20f4b7 350 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 32 217 2.2E-11 T 14-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal PhaeoP54_02957 cfd52baeb122d915cce85bf18dfe5d16 292 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 5.1E-17 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PhaeoP54_02957 cfd52baeb122d915cce85bf18dfe5d16 292 SUPERFAMILY SSF53850 92 289 4.65E-31 T 14-10-2018 PhaeoP54_02957 cfd52baeb122d915cce85bf18dfe5d16 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 1.7E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PhaeoP54_02957 cfd52baeb122d915cce85bf18dfe5d16 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 1.7E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PhaeoP54_02957 cfd52baeb122d915cce85bf18dfe5d16 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 1.7E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PhaeoP54_02957 cfd52baeb122d915cce85bf18dfe5d16 292 Gene3D G3DSA:1.10.10.10 6 94 1.8E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_02957 cfd52baeb122d915cce85bf18dfe5d16 292 SUPERFAMILY SSF46785 4 86 2.07E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_02957 cfd52baeb122d915cce85bf18dfe5d16 292 Pfam PF03466 LysR substrate binding domain 95 287 1.4E-26 T 14-10-2018 IPR005119 LysR, substrate-binding PhaeoP54_02957 cfd52baeb122d915cce85bf18dfe5d16 292 Gene3D G3DSA:3.40.190.10 100 284 7.4E-44 T 14-10-2018 PhaeoP54_02957 cfd52baeb122d915cce85bf18dfe5d16 292 Gene3D G3DSA:3.40.190.10 161 257 7.4E-44 T 14-10-2018 PhaeoP54_02570 1f28a993b119ee104fe9c6197d771dc3 310 Gene3D G3DSA:3.40.50.20 7 112 2.8E-107 T 14-10-2018 PhaeoP54_02570 1f28a993b119ee104fe9c6197d771dc3 310 Pfam PF02951 Prokaryotic glutathione synthetase, N-terminal domain 1 118 1.3E-39 T 14-10-2018 IPR004215 Prokaryotic glutathione synthetase, N-terminal GO:0004363|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 PhaeoP54_02570 1f28a993b119ee104fe9c6197d771dc3 310 SUPERFAMILY SSF52440 1 120 3.16E-40 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily PhaeoP54_02570 1f28a993b119ee104fe9c6197d771dc3 310 Gene3D G3DSA:3.30.1490.20 135 199 2.8E-107 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 PhaeoP54_02570 1f28a993b119ee104fe9c6197d771dc3 310 Gene3D G3DSA:3.30.470.20 113 292 2.8E-107 T 14-10-2018 PhaeoP54_02570 1f28a993b119ee104fe9c6197d771dc3 310 TIGRFAM TIGR01380 glut_syn: glutathione synthase 1 309 2.7E-122 T 14-10-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 PhaeoP54_02570 1f28a993b119ee104fe9c6197d771dc3 310 Pfam PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain 122 293 9.9E-72 T 14-10-2018 IPR004218 Prokaryotic glutathione synthetase, ATP-binding GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 PhaeoP54_02570 1f28a993b119ee104fe9c6197d771dc3 310 Hamap MF_00162 Glutathione synthetase [gshB]. 1 310 156.913 T 14-10-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 PhaeoP54_02570 1f28a993b119ee104fe9c6197d771dc3 310 SUPERFAMILY SSF56059 122 308 1.77E-59 T 14-10-2018 PhaeoP54_02264 e86531b257c1453cde00318e1893e9de 841 SMART SM00487 31 205 0.0055 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain PhaeoP54_02264 e86531b257c1453cde00318e1893e9de 841 Gene3D G3DSA:3.40.50.300 341 463 2.4E-7 T 14-10-2018 PhaeoP54_02264 e86531b257c1453cde00318e1893e9de 841 SMART SM00491 340 465 2.1E-4 T 14-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 PhaeoP54_02264 e86531b257c1453cde00318e1893e9de 841 SUPERFAMILY SSF52540 20 168 4.14E-14 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_02264 e86531b257c1453cde00318e1893e9de 841 Gene3D G3DSA:3.40.50.300 31 194 6.9E-16 T 14-10-2018 PhaeoP54_02264 e86531b257c1453cde00318e1893e9de 841 Pfam PF04851 Type III restriction enzyme, res subunit 37 161 4.2E-12 T 14-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 PhaeoP54_04037 e82867df051cda97fdadfedf8a2c69c3 434 PIRSF PIRSF500134 1 434 5.1E-180 T 14-10-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 PhaeoP54_04037 e82867df051cda97fdadfedf8a2c69c3 434 SMART SM00984 317 418 2.8E-42 T 14-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 PhaeoP54_04037 e82867df051cda97fdadfedf8a2c69c3 434 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 201 293 7.3E-38 T 14-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 PhaeoP54_04037 e82867df051cda97fdadfedf8a2c69c3 434 SUPERFAMILY SSF52413 306 429 2.62E-35 T 14-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 PhaeoP54_04037 e82867df051cda97fdadfedf8a2c69c3 434 Gene3D G3DSA:3.40.50.720 232 434 2.2E-68 T 14-10-2018 PhaeoP54_04037 e82867df051cda97fdadfedf8a2c69c3 434 SUPERFAMILY SSF51735 1 206 1.29E-55 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PhaeoP54_04037 e82867df051cda97fdadfedf8a2c69c3 434 Gene3D G3DSA:1.20.5.100 200 231 3.5E-19 T 14-10-2018 PhaeoP54_04037 e82867df051cda97fdadfedf8a2c69c3 434 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 414 9.9E-139 T 14-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 PhaeoP54_04037 e82867df051cda97fdadfedf8a2c69c3 434 PIRSF PIRSF000124 1 434 3.9E-141 T 14-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 PhaeoP54_04037 e82867df051cda97fdadfedf8a2c69c3 434 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 184 1.0E-67 T 14-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 PhaeoP54_04037 e82867df051cda97fdadfedf8a2c69c3 434 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 317 417 8.5E-29 T 14-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 PhaeoP54_04037 e82867df051cda97fdadfedf8a2c69c3 434 SUPERFAMILY SSF48179 201 293 9.75E-32 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 PhaeoP54_04037 e82867df051cda97fdadfedf8a2c69c3 434 Gene3D G3DSA:3.40.50.720 1 199 1.0E-81 T 14-10-2018 PhaeoP54_03973 201b9a9143754524d5e8716b7ef39275 145 Gene3D G3DSA:3.90.1590.10 1 119 5.2E-7 T 14-10-2018 PhaeoP54_03973 201b9a9143754524d5e8716b7ef39275 145 SUPERFAMILY SSF51316 9 138 6.49E-17 T 14-10-2018 IPR011057 Mss4-like superfamily PhaeoP54_03973 201b9a9143754524d5e8716b7ef39275 145 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 25 97 3.1E-8 T 14-10-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 PhaeoP54_00054 ec24b28b205f9e974b8273bc972e0090 754 Gene3D G3DSA:1.10.287.130 370 444 4.0E-24 T 14-10-2018 PhaeoP54_00054 ec24b28b205f9e974b8273bc972e0090 754 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 491 604 6.3E-30 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PhaeoP54_00054 ec24b28b205f9e974b8273bc972e0090 754 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 243 366 3.1E-21 T 14-10-2018 IPR000014 PAS domain PhaeoP54_00054 ec24b28b205f9e974b8273bc972e0090 754 SUPERFAMILY SSF55874 433 604 1.44E-46 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PhaeoP54_00054 ec24b28b205f9e974b8273bc972e0090 754 Gene3D G3DSA:3.40.50.12740 628 753 5.0E-38 T 14-10-2018 PhaeoP54_00054 ec24b28b205f9e974b8273bc972e0090 754 Pfam PF00072 Response regulator receiver domain 631 741 8.3E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PhaeoP54_00054 ec24b28b205f9e974b8273bc972e0090 754 SMART SM00388 379 444 1.4E-25 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PhaeoP54_00054 ec24b28b205f9e974b8273bc972e0090 754 SUPERFAMILY SSF52172 627 745 1.71E-36 T 14-10-2018 IPR011006 CheY-like superfamily PhaeoP54_00054 ec24b28b205f9e974b8273bc972e0090 754 SUPERFAMILY SSF55785 251 358 4.54E-25 T 14-10-2018 IPR035965 PAS domain superfamily PhaeoP54_00054 ec24b28b205f9e974b8273bc972e0090 754 SUPERFAMILY SSF47384 364 445 5.89E-21 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 PhaeoP54_00054 ec24b28b205f9e974b8273bc972e0090 754 SMART SM00086 317 359 4.6E-5 T 14-10-2018 IPR001610 PAC motif PhaeoP54_00054 ec24b28b205f9e974b8273bc972e0090 754 Pfam PF00989 PAS fold 245 356 5.1E-17 T 14-10-2018 IPR013767 PAS fold GO:0006355 PhaeoP54_00054 ec24b28b205f9e974b8273bc972e0090 754 Pfam PF00512 His Kinase A (phospho-acceptor) domain 380 444 3.5E-22 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PhaeoP54_00054 ec24b28b205f9e974b8273bc972e0090 754 SMART SM00387 491 606 1.3E-39 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PhaeoP54_00054 ec24b28b205f9e974b8273bc972e0090 754 Gene3D G3DSA:3.30.565.10 445 607 1.4E-54 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PhaeoP54_00054 ec24b28b205f9e974b8273bc972e0090 754 PRINTS PR00344 Bacterial sensor protein C-terminal signature 566 584 1.1E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PhaeoP54_00054 ec24b28b205f9e974b8273bc972e0090 754 PRINTS PR00344 Bacterial sensor protein C-terminal signature 531 545 1.1E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PhaeoP54_00054 ec24b28b205f9e974b8273bc972e0090 754 PRINTS PR00344 Bacterial sensor protein C-terminal signature 549 559 1.1E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PhaeoP54_00054 ec24b28b205f9e974b8273bc972e0090 754 PRINTS PR00344 Bacterial sensor protein C-terminal signature 590 603 1.1E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PhaeoP54_00054 ec24b28b205f9e974b8273bc972e0090 754 Gene3D G3DSA:3.30.450.20 241 369 3.9E-31 T 14-10-2018 PhaeoP54_00054 ec24b28b205f9e974b8273bc972e0090 754 SMART SM00091 244 311 1.1E-8 T 14-10-2018 IPR000014 PAS domain PhaeoP54_00054 ec24b28b205f9e974b8273bc972e0090 754 SMART SM00448 629 741 1.6E-34 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PhaeoP54_03643 cca96482d0ae68348a9983ede77c2837 325 PRINTS PR00416 Eukaryotic DNA topoisomerase I signature 231 245 5.6E-7 T 14-10-2018 IPR001631 DNA topoisomerase I GO:0003677|GO:0003917|GO:0006265 PhaeoP54_03643 cca96482d0ae68348a9983ede77c2837 325 PRINTS PR00416 Eukaryotic DNA topoisomerase I signature 122 141 5.6E-7 T 14-10-2018 IPR001631 DNA topoisomerase I GO:0003677|GO:0003917|GO:0006265 PhaeoP54_03643 cca96482d0ae68348a9983ede77c2837 325 PRINTS PR00416 Eukaryotic DNA topoisomerase I signature 145 159 5.6E-7 T 14-10-2018 IPR001631 DNA topoisomerase I GO:0003677|GO:0003917|GO:0006265 PhaeoP54_03643 cca96482d0ae68348a9983ede77c2837 325 PRINTS PR00416 Eukaryotic DNA topoisomerase I signature 274 285 5.6E-7 T 14-10-2018 IPR001631 DNA topoisomerase I GO:0003677|GO:0003917|GO:0006265 PhaeoP54_03643 cca96482d0ae68348a9983ede77c2837 325 Gene3D G3DSA:3.90.15.10 113 232 1.9E-57 T 14-10-2018 IPR014711 DNA topoisomerase I, catalytic core, alpha-helical subdomain, eukaryotic-type GO:0003677|GO:0003917|GO:0006265 PhaeoP54_03643 cca96482d0ae68348a9983ede77c2837 325 SUPERFAMILY SSF56349 78 288 4.41E-46 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 PhaeoP54_03643 cca96482d0ae68348a9983ede77c2837 325 Pfam PF01028 Eukaryotic DNA topoisomerase I, catalytic core 85 245 6.4E-13 T 14-10-2018 IPR013500 DNA topoisomerase I, catalytic core, eukaryotic-type GO:0003677|GO:0003917|GO:0006265 PhaeoP54_03643 cca96482d0ae68348a9983ede77c2837 325 Gene3D G3DSA:3.30.66.10 6 89 6.4E-29 T 14-10-2018 IPR035447 DNA topoisomerase I, N-terminal PhaeoP54_03643 cca96482d0ae68348a9983ede77c2837 325 SUPERFAMILY SSF55869 22 83 3.53E-19 T 14-10-2018 IPR035447 DNA topoisomerase I, N-terminal PhaeoP54_03643 cca96482d0ae68348a9983ede77c2837 325 Gene3D G3DSA:1.10.132.120 90 289 1.9E-57 T 14-10-2018 PhaeoP54_02009 b6b1937a5b300a244633d81c690595a8 648 SUPERFAMILY SSF55186 66 245 1.24E-60 T 14-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 PhaeoP54_02009 b6b1937a5b300a244633d81c690595a8 648 SMART SM00863 172 223 1.3E-21 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 PhaeoP54_02009 b6b1937a5b300a244633d81c690595a8 648 PRINTS PR01047 Threonyl-tRNA synthetase signature 372 395 7.7E-50 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 PhaeoP54_02009 b6b1937a5b300a244633d81c690595a8 648 PRINTS PR01047 Threonyl-tRNA synthetase signature 517 530 7.7E-50 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 PhaeoP54_02009 b6b1937a5b300a244633d81c690595a8 648 PRINTS PR01047 Threonyl-tRNA synthetase signature 544 556 7.7E-50 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 PhaeoP54_02009 b6b1937a5b300a244633d81c690595a8 648 PRINTS PR01047 Threonyl-tRNA synthetase signature 339 367 7.7E-50 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 PhaeoP54_02009 b6b1937a5b300a244633d81c690595a8 648 PRINTS PR01047 Threonyl-tRNA synthetase signature 474 502 7.7E-50 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 PhaeoP54_02009 b6b1937a5b300a244633d81c690595a8 648 Gene3D G3DSA:3.10.20.30 1 64 9.1E-23 T 14-10-2018 IPR012675 Beta-grasp domain superfamily PhaeoP54_02009 b6b1937a5b300a244633d81c690595a8 648 SUPERFAMILY SSF81271 5 63 2.62E-16 T 14-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 PhaeoP54_02009 b6b1937a5b300a244633d81c690595a8 648 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 333 539 9.8E-40 T 14-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 PhaeoP54_02009 b6b1937a5b300a244633d81c690595a8 648 SUPERFAMILY SSF55681 247 536 5.77E-96 T 14-10-2018 PhaeoP54_02009 b6b1937a5b300a244633d81c690595a8 648 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 69 644 32.188 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 PhaeoP54_02009 b6b1937a5b300a244633d81c690595a8 648 SUPERFAMILY SSF52954 540 639 2.57E-26 T 14-10-2018 PhaeoP54_02009 b6b1937a5b300a244633d81c690595a8 648 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 75 636 5.3E-199 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 PhaeoP54_02009 b6b1937a5b300a244633d81c690595a8 648 Gene3D G3DSA:3.40.50.800 542 643 1.0E-24 T 14-10-2018 IPR036621 Anticodon-binding domain superfamily PhaeoP54_02009 b6b1937a5b300a244633d81c690595a8 648 Pfam PF02824 TGS domain 7 63 1.8E-11 T 14-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 PhaeoP54_02009 b6b1937a5b300a244633d81c690595a8 648 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 173 223 1.4E-11 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 PhaeoP54_02009 b6b1937a5b300a244633d81c690595a8 648 Pfam PF03129 Anticodon binding domain 551 629 5.9E-15 T 14-10-2018 IPR004154 Anticodon-binding PhaeoP54_02009 b6b1937a5b300a244633d81c690595a8 648 Gene3D G3DSA:3.30.930.10 227 541 1.2E-118 T 14-10-2018 PhaeoP54_02009 b6b1937a5b300a244633d81c690595a8 648 Gene3D G3DSA:3.30.980.10 72 226 1.4E-58 T 14-10-2018 PhaeoP54_02009 b6b1937a5b300a244633d81c690595a8 648 Gene3D G3DSA:3.30.54.20 133 189 1.4E-58 T 14-10-2018 PhaeoP54_02952 0967cbafa8ceaa855e31083f1cdce914 108 TIGRFAM TIGR02300 FYDLN_acid: TIGR02300 family protein 1 107 1.8E-19 T 14-10-2018 IPR012644 Conserved hypothetical protein CHP02300, FYDLN acid PhaeoP54_02952 0967cbafa8ceaa855e31083f1cdce914 108 Pfam PF09538 Protein of unknown function (FYDLN_acid) 1 107 8.9E-28 T 14-10-2018 IPR012644 Conserved hypothetical protein CHP02300, FYDLN acid PhaeoP54_00065 0d4fcc4f0a65492c0505c48b4974c3e5 494 Gene3D G3DSA:3.30.420.40 1 250 4.3E-106 T 14-10-2018 PhaeoP54_00065 0d4fcc4f0a65492c0505c48b4974c3e5 494 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 3 249 1.6E-77 T 14-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 PhaeoP54_00065 0d4fcc4f0a65492c0505c48b4974c3e5 494 SUPERFAMILY SSF53067 3 252 1.37E-95 T 14-10-2018 PhaeoP54_00065 0d4fcc4f0a65492c0505c48b4974c3e5 494 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 359 379 - T 14-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 PhaeoP54_00065 0d4fcc4f0a65492c0505c48b4974c3e5 494 Hamap MF_00186 Glycerol kinase [glpK]. 1 494 52.036 T 14-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 PhaeoP54_00065 0d4fcc4f0a65492c0505c48b4974c3e5 494 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 259 448 3.5E-52 T 14-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 PhaeoP54_00065 0d4fcc4f0a65492c0505c48b4974c3e5 494 PIRSF PIRSF000538 1 494 1.6E-167 T 14-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 PhaeoP54_00065 0d4fcc4f0a65492c0505c48b4974c3e5 494 Gene3D G3DSA:3.30.420.40 251 492 1.2E-81 T 14-10-2018 PhaeoP54_00065 0d4fcc4f0a65492c0505c48b4974c3e5 494 SUPERFAMILY SSF53067 252 489 2.59E-73 T 14-10-2018 PhaeoP54_00065 0d4fcc4f0a65492c0505c48b4974c3e5 494 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 3 491 5.0E-206 T 14-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 PhaeoP54_02752 13df8c5d595737a03d5f580897048526 1044 Pfam PF00512 His Kinase A (phospho-acceptor) domain 664 728 1.2E-6 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PhaeoP54_02752 13df8c5d595737a03d5f580897048526 1044 PRINTS PR00344 Bacterial sensor protein C-terminal signature 836 850 2.5E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PhaeoP54_02752 13df8c5d595737a03d5f580897048526 1044 PRINTS PR00344 Bacterial sensor protein C-terminal signature 867 885 2.5E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PhaeoP54_02752 13df8c5d595737a03d5f580897048526 1044 PRINTS PR00344 Bacterial sensor protein C-terminal signature 891 904 2.5E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PhaeoP54_02752 13df8c5d595737a03d5f580897048526 1044 PRINTS PR00344 Bacterial sensor protein C-terminal signature 854 864 2.5E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PhaeoP54_02752 13df8c5d595737a03d5f580897048526 1044 Gene3D G3DSA:3.40.190.10 264 472 3.0E-30 T 14-10-2018 PhaeoP54_02752 13df8c5d595737a03d5f580897048526 1044 Gene3D G3DSA:1.10.287.130 658 727 2.2E-10 T 14-10-2018 PhaeoP54_02752 13df8c5d595737a03d5f580897048526 1044 SMART SM00387 770 907 1.2E-17 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PhaeoP54_02752 13df8c5d595737a03d5f580897048526 1044 SUPERFAMILY SSF53850 254 477 1.57E-34 T 14-10-2018 PhaeoP54_02752 13df8c5d595737a03d5f580897048526 1044 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 30 247 7.9E-26 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PhaeoP54_02752 13df8c5d595737a03d5f580897048526 1044 SMART SM00388 664 729 2.4E-7 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PhaeoP54_02752 13df8c5d595737a03d5f580897048526 1044 Gene3D G3DSA:3.40.50.2300 925 1044 1.6E-24 T 14-10-2018 PhaeoP54_02752 13df8c5d595737a03d5f580897048526 1044 SUPERFAMILY SSF55874 723 905 8.38E-31 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PhaeoP54_02752 13df8c5d595737a03d5f580897048526 1044 SMART SM00062 29 249 6.2E-17 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PhaeoP54_02752 13df8c5d595737a03d5f580897048526 1044 SMART SM00062 256 476 7.4E-20 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PhaeoP54_02752 13df8c5d595737a03d5f580897048526 1044 SUPERFAMILY SSF53850 30 249 7.85E-31 T 14-10-2018 PhaeoP54_02752 13df8c5d595737a03d5f580897048526 1044 SUPERFAMILY SSF47384 649 727 1.69E-8 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 PhaeoP54_02752 13df8c5d595737a03d5f580897048526 1044 Gene3D G3DSA:3.40.190.10 114 207 2.2E-24 T 14-10-2018 PhaeoP54_02752 13df8c5d595737a03d5f580897048526 1044 Gene3D G3DSA:3.40.190.10 340 434 3.0E-30 T 14-10-2018 PhaeoP54_02752 13df8c5d595737a03d5f580897048526 1044 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 771 905 4.9E-15 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PhaeoP54_02752 13df8c5d595737a03d5f580897048526 1044 Gene3D G3DSA:3.40.190.10 37 245 2.2E-24 T 14-10-2018 PhaeoP54_02752 13df8c5d595737a03d5f580897048526 1044 SMART SM00448 927 1038 3.9E-19 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PhaeoP54_02752 13df8c5d595737a03d5f580897048526 1044 SUPERFAMILY SSF55785 519 647 3.43E-6 T 14-10-2018 IPR035965 PAS domain superfamily PhaeoP54_02752 13df8c5d595737a03d5f580897048526 1044 Gene3D G3DSA:3.30.565.10 734 909 8.7E-36 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PhaeoP54_02752 13df8c5d595737a03d5f580897048526 1044 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 257 474 3.1E-31 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PhaeoP54_02752 13df8c5d595737a03d5f580897048526 1044 Pfam PF00072 Response regulator receiver domain 929 1038 5.2E-15 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PhaeoP54_02752 13df8c5d595737a03d5f580897048526 1044 SUPERFAMILY SSF52172 927 1043 1.57E-25 T 14-10-2018 IPR011006 CheY-like superfamily PhaeoP54_02752 13df8c5d595737a03d5f580897048526 1044 Gene3D G3DSA:3.30.450.20 518 647 3.1E-8 T 14-10-2018 PhaeoP54_03575 4280aba7aa527f3bae7b7da0a7d68946 246 SMART SM00419 39 88 1.2E-5 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 PhaeoP54_03575 4280aba7aa527f3bae7b7da0a7d68946 246 Gene3D G3DSA:3.40.1410.10 105 239 1.1E-28 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily PhaeoP54_03575 4280aba7aa527f3bae7b7da0a7d68946 246 SMART SM00866 105 241 1.4E-27 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 PhaeoP54_03575 4280aba7aa527f3bae7b7da0a7d68946 246 SUPERFAMILY SSF46785 20 102 1.63E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_03575 4280aba7aa527f3bae7b7da0a7d68946 246 SUPERFAMILY SSF64288 110 240 2.2E-35 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily PhaeoP54_03575 4280aba7aa527f3bae7b7da0a7d68946 246 Pfam PF00392 Bacterial regulatory proteins, gntR family 23 84 2.1E-15 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PhaeoP54_03575 4280aba7aa527f3bae7b7da0a7d68946 246 SMART SM00345 25 84 1.6E-13 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PhaeoP54_03575 4280aba7aa527f3bae7b7da0a7d68946 246 Gene3D G3DSA:1.10.10.10 21 95 4.0E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_03575 4280aba7aa527f3bae7b7da0a7d68946 246 Pfam PF07702 UTRA domain 109 237 4.2E-27 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 PhaeoP54_03575 4280aba7aa527f3bae7b7da0a7d68946 246 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 58 74 1.9E-8 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PhaeoP54_03575 4280aba7aa527f3bae7b7da0a7d68946 246 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 44 58 1.9E-8 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PhaeoP54_00640 23ec1a734d1fc94202938bc951a3e062 261 SUPERFAMILY SSF48179 163 242 1.36E-8 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 PhaeoP54_00640 23ec1a734d1fc94202938bc951a3e062 261 Pfam PF02153 Prephenate dehydrogenase 57 242 6.8E-27 T 14-10-2018 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 PhaeoP54_00640 23ec1a734d1fc94202938bc951a3e062 261 Gene3D G3DSA:3.40.50.720 3 168 4.1E-28 T 14-10-2018 PhaeoP54_00640 23ec1a734d1fc94202938bc951a3e062 261 SUPERFAMILY SSF51735 4 152 5.88E-27 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PhaeoP54_00304 e8a17b3834e60a743cfe60e0c9136959 582 SUPERFAMILY SSF48452 48 196 2.87E-5 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 PhaeoP54_00304 e8a17b3834e60a743cfe60e0c9136959 582 SUPERFAMILY SSF48452 145 404 1.19E-14 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 PhaeoP54_00304 e8a17b3834e60a743cfe60e0c9136959 582 SMART SM00028 443 477 320.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 PhaeoP54_00304 e8a17b3834e60a743cfe60e0c9136959 582 SMART SM00028 35 68 50.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 PhaeoP54_00304 e8a17b3834e60a743cfe60e0c9136959 582 SMART SM00028 478 511 36.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 PhaeoP54_00304 e8a17b3834e60a743cfe60e0c9136959 582 SMART SM00028 371 404 0.052 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 PhaeoP54_00304 e8a17b3834e60a743cfe60e0c9136959 582 SMART SM00028 303 336 160.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 PhaeoP54_00304 e8a17b3834e60a743cfe60e0c9136959 582 SMART SM00028 409 442 2.7E-5 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 PhaeoP54_00304 e8a17b3834e60a743cfe60e0c9136959 582 Gene3D G3DSA:1.25.40.10 410 569 2.7E-31 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 PhaeoP54_00304 e8a17b3834e60a743cfe60e0c9136959 582 Gene3D G3DSA:1.25.40.10 38 272 1.6E-10 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 PhaeoP54_00304 e8a17b3834e60a743cfe60e0c9136959 582 Pfam PF13174 Tetratricopeptide repeat 304 335 0.032 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 PhaeoP54_00304 e8a17b3834e60a743cfe60e0c9136959 582 Pfam PF13432 Tetratricopeptide repeat 342 399 3.7E-8 T 14-10-2018 PhaeoP54_00304 e8a17b3834e60a743cfe60e0c9136959 582 Pfam PF13432 Tetratricopeptide repeat 143 198 6.6E-4 T 14-10-2018 PhaeoP54_00304 e8a17b3834e60a743cfe60e0c9136959 582 Pfam PF13432 Tetratricopeptide repeat 459 506 3.3E-5 T 14-10-2018 PhaeoP54_00304 e8a17b3834e60a743cfe60e0c9136959 582 SUPERFAMILY SSF48452 368 541 6.64E-34 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 PhaeoP54_00304 e8a17b3834e60a743cfe60e0c9136959 582 Gene3D G3DSA:1.25.40.10 273 409 1.8E-16 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 PhaeoP54_00304 e8a17b3834e60a743cfe60e0c9136959 582 Pfam PF07719 Tetratricopeptide repeat 410 441 1.8E-6 T 14-10-2018 IPR013105 Tetratricopeptide repeat 2 PhaeoP54_01420 69bca5eefe3c4eaaf03877b785ed79d1 150 Gene3D G3DSA:3.90.1010.10 5 142 1.9E-20 T 14-10-2018 PhaeoP54_01420 69bca5eefe3c4eaaf03877b785ed79d1 150 SUPERFAMILY SSF82649 3 144 4.97E-41 T 14-10-2018 PhaeoP54_01420 69bca5eefe3c4eaaf03877b785ed79d1 150 Pfam PF01592 NifU-like N terminal domain 31 92 2.5E-4 T 14-10-2018 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 PhaeoP54_03246 8d44968e8bdd161c87ad95ac7ef0762e 296 SUPERFAMILY SSF103481 52 149 1.7E-11 T 14-10-2018 PhaeoP54_03246 8d44968e8bdd161c87ad95ac7ef0762e 296 SUPERFAMILY SSF103481 210 286 1.96E-5 T 14-10-2018 PhaeoP54_03246 8d44968e8bdd161c87ad95ac7ef0762e 296 Pfam PF00892 EamA-like transporter family 12 147 2.1E-11 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 PhaeoP54_03246 8d44968e8bdd161c87ad95ac7ef0762e 296 TIGRFAM TIGR00688 rarD: protein RarD 13 262 3.1E-61 T 14-10-2018 IPR004626 RarD protein GO:0005887 PhaeoP54_01601 832f3dba9cb08e86925921554d6e9edd 143 SUPERFAMILY SSF52402 3 143 4.35E-24 T 14-10-2018 PhaeoP54_01601 832f3dba9cb08e86925921554d6e9edd 143 Gene3D G3DSA:3.40.50.620 1 143 2.9E-28 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PhaeoP54_01601 832f3dba9cb08e86925921554d6e9edd 143 Pfam PF00582 Universal stress protein family 1 143 8.7E-23 T 14-10-2018 IPR006016 UspA PhaeoP54_01601 832f3dba9cb08e86925921554d6e9edd 143 PRINTS PR01438 Universal stress protein signature 121 143 1.4E-6 T 14-10-2018 IPR006015 Universal stress protein A PhaeoP54_01601 832f3dba9cb08e86925921554d6e9edd 143 PRINTS PR01438 Universal stress protein signature 104 116 1.4E-6 T 14-10-2018 IPR006015 Universal stress protein A PhaeoP54_02352 fe78489bfd968d7f4c857d1598a0536f 318 Gene3D G3DSA:3.40.50.720 5 312 1.9E-97 T 14-10-2018 PhaeoP54_02352 fe78489bfd968d7f4c857d1598a0536f 318 Gene3D G3DSA:3.40.50.720 100 287 1.9E-97 T 14-10-2018 PhaeoP54_02352 fe78489bfd968d7f4c857d1598a0536f 318 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 111 287 4.5E-51 T 14-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 PhaeoP54_02352 fe78489bfd968d7f4c857d1598a0536f 318 SUPERFAMILY SSF52283 4 139 4.54E-29 T 14-10-2018 PhaeoP54_02352 fe78489bfd968d7f4c857d1598a0536f 318 SUPERFAMILY SSF51735 103 287 1.42E-54 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PhaeoP54_02352 fe78489bfd968d7f4c857d1598a0536f 318 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 19 318 1.2E-25 T 14-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 PhaeoP54_02817 d065ff6608554084027f1b71b874c321 240 Pfam PF00994 Probable molybdopterin binding domain 7 166 8.5E-32 T 14-10-2018 IPR001453 MoaB/Mog domain PhaeoP54_02817 d065ff6608554084027f1b71b874c321 240 SUPERFAMILY SSF53218 4 199 2.88E-38 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily PhaeoP54_02817 d065ff6608554084027f1b71b874c321 240 Gene3D G3DSA:3.40.980.10 4 168 5.9E-55 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily PhaeoP54_02817 d065ff6608554084027f1b71b874c321 240 SMART SM00852 7 170 3.1E-29 T 14-10-2018 IPR001453 MoaB/Mog domain PhaeoP54_01875 578bf330471075d1949204d6096526d5 140 SMART SM00562 3 140 1.8E-82 T 14-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 PhaeoP54_01875 578bf330471075d1949204d6096526d5 140 Pfam PF00334 Nucleoside diphosphate kinase 4 135 1.1E-52 T 14-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 PhaeoP54_01875 578bf330471075d1949204d6096526d5 140 SUPERFAMILY SSF54919 1 139 7.33E-55 T 14-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 PhaeoP54_01875 578bf330471075d1949204d6096526d5 140 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 3 138 34.247 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 PhaeoP54_01875 578bf330471075d1949204d6096526d5 140 ProSitePatterns PS00469 Nucleoside diphosphate kinases active site. 114 122 - T 14-10-2018 IPR023005 Nucleoside diphosphate kinase, active site KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 PhaeoP54_01875 578bf330471075d1949204d6096526d5 140 Gene3D G3DSA:3.30.70.141 1 139 8.4E-54 T 14-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 PhaeoP54_01875 578bf330471075d1949204d6096526d5 140 PRINTS PR01243 Nucleoside diphosphate kinase signature 91 107 3.9E-37 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 PhaeoP54_01875 578bf330471075d1949204d6096526d5 140 PRINTS PR01243 Nucleoside diphosphate kinase signature 6 28 3.9E-37 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 PhaeoP54_01875 578bf330471075d1949204d6096526d5 140 PRINTS PR01243 Nucleoside diphosphate kinase signature 114 133 3.9E-37 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 PhaeoP54_01875 578bf330471075d1949204d6096526d5 140 PRINTS PR01243 Nucleoside diphosphate kinase signature 70 87 3.9E-37 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 PhaeoP54_01875 578bf330471075d1949204d6096526d5 140 PRINTS PR01243 Nucleoside diphosphate kinase signature 50 69 3.9E-37 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 PhaeoP54_01401 b89aa1396254b38eb4f618a99310e054 249 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 16 248 3.9E-97 T 14-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 PhaeoP54_01401 b89aa1396254b38eb4f618a99310e054 249 Hamap MF_01220_B Uridylate kinase [pyrH]. 14 248 43.008 T 14-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 PhaeoP54_01401 b89aa1396254b38eb4f618a99310e054 249 Gene3D G3DSA:3.40.1160.10 9 249 1.4E-68 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily PhaeoP54_01401 b89aa1396254b38eb4f618a99310e054 249 SUPERFAMILY SSF53633 15 248 6.68E-64 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily PhaeoP54_01401 b89aa1396254b38eb4f618a99310e054 249 PIRSF PIRSF005650 11 249 3.2E-87 T 14-10-2018 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22 PhaeoP54_01401 b89aa1396254b38eb4f618a99310e054 249 Pfam PF00696 Amino acid kinase family 17 226 1.9E-21 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 PhaeoP54_03143 ac0f0385fca5abd482fd627687936795 346 Pfam PF01636 Phosphotransferase enzyme family 62 273 1.2E-12 T 14-10-2018 IPR002575 Aminoglycoside phosphotransferase PhaeoP54_03143 ac0f0385fca5abd482fd627687936795 346 SUPERFAMILY SSF56112 60 313 1.6E-20 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily PhaeoP54_01717 8adf46c9357e6003579210ee0dae3494 195 SUPERFAMILY SSF101874 21 194 1.7E-42 T 14-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily PhaeoP54_01717 8adf46c9357e6003579210ee0dae3494 195 SMART SM00867 24 192 8.6E-52 T 14-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like PhaeoP54_01717 8adf46c9357e6003579210ee0dae3494 195 Pfam PF04264 YceI-like domain 25 190 1.9E-33 T 14-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like PhaeoP54_01717 8adf46c9357e6003579210ee0dae3494 195 Gene3D G3DSA:2.40.128.110 23 193 9.3E-43 T 14-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily PhaeoP54_01991 34fb7b5ad28c3cb0a9685619c3a092c9 219 Pfam PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment 49 219 1.7E-73 T 14-10-2018 IPR015304 ZinT domain GO:0008270 PhaeoP54_01991 34fb7b5ad28c3cb0a9685619c3a092c9 219 Gene3D G3DSA:2.40.128.20 36 219 5.9E-72 T 14-10-2018 IPR012674 Calycin PhaeoP54_01991 34fb7b5ad28c3cb0a9685619c3a092c9 219 SUPERFAMILY SSF50814 42 219 4.15E-68 T 14-10-2018 IPR012674 Calycin PhaeoP54_03054 cd31fffba9230736b5c60b768eaf38bc 124 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 59 123 5.0E-27 T 14-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PhaeoP54_03054 cd31fffba9230736b5c60b768eaf38bc 124 Gene3D G3DSA:3.30.1390.10 55 124 7.5E-28 T 14-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like PhaeoP54_03054 cd31fffba9230736b5c60b768eaf38bc 124 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 5 52 1.8E-12 T 14-10-2018 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PhaeoP54_03054 cd31fffba9230736b5c60b768eaf38bc 124 SUPERFAMILY SSF48300 3 61 3.27E-12 T 14-10-2018 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PhaeoP54_03054 cd31fffba9230736b5c60b768eaf38bc 124 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 1 124 21.404 T 14-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PhaeoP54_03054 cd31fffba9230736b5c60b768eaf38bc 124 SUPERFAMILY SSF54736 54 123 4.19E-24 T 14-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like PhaeoP54_03054 cd31fffba9230736b5c60b768eaf38bc 124 Gene3D G3DSA:1.20.5.710 3 54 2.1E-9 T 14-10-2018 PhaeoP54_03054 cd31fffba9230736b5c60b768eaf38bc 124 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 60 123 5.0E-26 T 14-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PhaeoP54_03054 cd31fffba9230736b5c60b768eaf38bc 124 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 123 4.7E-34 T 14-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PhaeoP54_02185 e721652256d9e775a68d5cda14cd9a88 238 Gene3D G3DSA:3.40.50.12740 25 230 1.3E-47 T 14-10-2018 PhaeoP54_02185 e721652256d9e775a68d5cda14cd9a88 238 SMART SM00448 25 138 2.2E-17 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PhaeoP54_02185 e721652256d9e775a68d5cda14cd9a88 238 SUPERFAMILY SSF52172 26 149 1.57E-21 T 14-10-2018 IPR011006 CheY-like superfamily PhaeoP54_02185 e721652256d9e775a68d5cda14cd9a88 238 SMART SM00421 168 225 1.1E-22 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PhaeoP54_02185 e721652256d9e775a68d5cda14cd9a88 238 Pfam PF00072 Response regulator receiver domain 28 132 1.4E-19 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PhaeoP54_02185 e721652256d9e775a68d5cda14cd9a88 238 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 201 213 8.7E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PhaeoP54_02185 e721652256d9e775a68d5cda14cd9a88 238 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 185 201 8.7E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PhaeoP54_02185 e721652256d9e775a68d5cda14cd9a88 238 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 171 185 8.7E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PhaeoP54_02185 e721652256d9e775a68d5cda14cd9a88 238 ProSitePatterns PS00622 LuxR-type HTH domain signature. 185 212 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PhaeoP54_02185 e721652256d9e775a68d5cda14cd9a88 238 SUPERFAMILY SSF46894 161 229 1.77E-19 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PhaeoP54_02185 e721652256d9e775a68d5cda14cd9a88 238 Pfam PF00196 Bacterial regulatory proteins, luxR family 170 225 5.0E-20 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PhaeoP54_00201 346b3f34230fc6fda02582c62f30bda6 398 SUPERFAMILY SSF53383 9 387 2.02E-79 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PhaeoP54_00201 346b3f34230fc6fda02582c62f30bda6 398 PIRSF PIRSF000390 7 392 3.2E-77 T 14-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase PhaeoP54_00201 346b3f34230fc6fda02582c62f30bda6 398 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 20 384 1.9E-72 T 14-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase PhaeoP54_00201 346b3f34230fc6fda02582c62f30bda6 398 Gene3D G3DSA:3.90.1150.10 272 385 1.4E-14 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 PhaeoP54_00201 346b3f34230fc6fda02582c62f30bda6 398 Gene3D G3DSA:3.40.640.10 8 270 2.2E-66 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PhaeoP54_00093 477509c58793200db038d26c20906019 310 SMART SM00382 36 216 1.4E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_00093 477509c58793200db038d26c20906019 310 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PhaeoP54_00093 477509c58793200db038d26c20906019 310 Pfam PF00005 ABC transporter 27 169 2.7E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PhaeoP54_00093 477509c58793200db038d26c20906019 310 Gene3D G3DSA:3.40.50.300 1 239 2.3E-64 T 14-10-2018 PhaeoP54_00093 477509c58793200db038d26c20906019 310 SUPERFAMILY SSF52540 4 233 1.23E-62 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_02269 e6f58d89ab970bb1a37d7b02ab9ca661 118 TIGRFAM TIGR03889 nitrile_acc: nitrile hydratase accessory protein 16 87 2.1E-28 T 14-10-2018 IPR023808 Nitrile hydratase accessory protein, putative PhaeoP54_02269 e6f58d89ab970bb1a37d7b02ab9ca661 118 SUPERFAMILY SSF50090 6 113 4.71E-21 T 14-10-2018 IPR008990 Electron transport accessory-like domain superfamily PhaeoP54_02269 e6f58d89ab970bb1a37d7b02ab9ca661 118 Gene3D G3DSA:1.10.472.20 1 111 4.4E-13 T 14-10-2018 PhaeoP54_02269 e6f58d89ab970bb1a37d7b02ab9ca661 118 Pfam PF02211 Nitrile hydratase beta subunit 10 95 5.8E-8 T 14-10-2018 IPR024690 Nitrile hydratase beta subunit domain GO:0018822 KEGG: 00364+4.2.1.84|KEGG: 00380+4.2.1.84|KEGG: 00627+4.2.1.84|KEGG: 00643+4.2.1.84|MetaCyc: PWY-5025|MetaCyc: PWY-581|MetaCyc: PWY-7308 PhaeoP54_01194 79749821488e0c43ab6acdee136d0c58 113 Pfam PF03960 ArsC family 6 110 9.2E-15 T 14-10-2018 IPR006660 Arsenate reductase-like PhaeoP54_01194 79749821488e0c43ab6acdee136d0c58 113 Gene3D G3DSA:3.40.30.10 1 113 6.3E-40 T 14-10-2018 PhaeoP54_01194 79749821488e0c43ab6acdee136d0c58 113 TIGRFAM TIGR00014 arsC: arsenate reductase (glutaredoxin) 2 112 1.0E-36 T 14-10-2018 IPR006659 Arsenate reductase GO:0008794|GO:0055114 MetaCyc: PWY-4202|MetaCyc: PWY-4621 PhaeoP54_01194 79749821488e0c43ab6acdee136d0c58 113 SUPERFAMILY SSF52833 1 113 1.03E-27 T 14-10-2018 IPR036249 Thioredoxin-like superfamily PhaeoP54_01871 efd822c66c036f9140db991e7e4544bb 449 SUPERFAMILY SSF53448 33 271 2.94E-21 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PhaeoP54_01871 efd822c66c036f9140db991e7e4544bb 449 Pfam PF01050 Mannose-6-phosphate isomerase 342 432 9.6E-12 T 14-10-2018 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal GO:0005976|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882 PhaeoP54_01871 efd822c66c036f9140db991e7e4544bb 449 Gene3D G3DSA:3.90.550.10 17 298 2.0E-30 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PhaeoP54_01417 7d0fcdc7f7cf587276997ef503ba14f1 752 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 17 330 3.1E-107 T 14-10-2018 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 PhaeoP54_01417 7d0fcdc7f7cf587276997ef503ba14f1 752 SUPERFAMILY SSF47781 427 661 2.22E-37 T 14-10-2018 IPR010994 RuvA domain 2-like PhaeoP54_01417 7d0fcdc7f7cf587276997ef503ba14f1 752 Gene3D G3DSA:1.10.287.610 12 83 6.8E-13 T 14-10-2018 PhaeoP54_01417 7d0fcdc7f7cf587276997ef503ba14f1 752 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 130 159 - T 14-10-2018 IPR018239 NAD-dependent DNA ligase, active site PhaeoP54_01417 7d0fcdc7f7cf587276997ef503ba14f1 752 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 334 421 2.4E-32 T 14-10-2018 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 PhaeoP54_01417 7d0fcdc7f7cf587276997ef503ba14f1 752 Pfam PF12826 Helix-hairpin-helix motif 541 572 1.2E-6 T 14-10-2018 PhaeoP54_01417 7d0fcdc7f7cf587276997ef503ba14f1 752 Gene3D G3DSA:1.10.150.20 455 535 2.2E-25 T 14-10-2018 PhaeoP54_01417 7d0fcdc7f7cf587276997ef503ba14f1 752 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 431 457 2.6E-11 T 14-10-2018 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 PhaeoP54_01417 7d0fcdc7f7cf587276997ef503ba14f1 752 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 24 745 2.3E-209 T 14-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 PhaeoP54_01417 7d0fcdc7f7cf587276997ef503ba14f1 752 SMART SM00532 16 471 6.9E-225 T 14-10-2018 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 PhaeoP54_01417 7d0fcdc7f7cf587276997ef503ba14f1 752 SMART SM00292 675 752 5.7E-11 T 14-10-2018 IPR001357 BRCT domain PhaeoP54_01417 7d0fcdc7f7cf587276997ef503ba14f1 752 SUPERFAMILY SSF56091 13 328 3.29E-109 T 14-10-2018 PhaeoP54_01417 7d0fcdc7f7cf587276997ef503ba14f1 752 Hamap MF_01588 DNA ligase [ligA]. 15 749 47.659 T 14-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 PhaeoP54_01417 7d0fcdc7f7cf587276997ef503ba14f1 752 Gene3D G3DSA:3.40.50.10190 666 750 1.6E-26 T 14-10-2018 IPR036420 BRCT domain superfamily PhaeoP54_01417 7d0fcdc7f7cf587276997ef503ba14f1 752 SUPERFAMILY SSF52113 673 750 3.74E-18 T 14-10-2018 IPR036420 BRCT domain superfamily PhaeoP54_01417 7d0fcdc7f7cf587276997ef503ba14f1 752 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 676 749 1.7E-11 T 14-10-2018 IPR001357 BRCT domain PhaeoP54_01417 7d0fcdc7f7cf587276997ef503ba14f1 752 Gene3D G3DSA:2.20.70.80 415 454 1.4E-18 T 14-10-2018 PhaeoP54_01417 7d0fcdc7f7cf587276997ef503ba14f1 752 SUPERFAMILY SSF50249 330 424 2.06E-23 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold PhaeoP54_01417 7d0fcdc7f7cf587276997ef503ba14f1 752 PIRSF PIRSF001604 8 752 1.9E-210 T 14-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 PhaeoP54_01417 7d0fcdc7f7cf587276997ef503ba14f1 752 Gene3D G3DSA:2.40.50.140 330 413 4.6E-33 T 14-10-2018 PhaeoP54_01417 7d0fcdc7f7cf587276997ef503ba14f1 752 Gene3D G3DSA:3.30.470.90 84 329 6.7E-95 T 14-10-2018 PhaeoP54_01417 7d0fcdc7f7cf587276997ef503ba14f1 752 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 343 358 - T 14-10-2018 IPR033136 NAD-dependent DNA ligase, conserved site PhaeoP54_03895 c8b76c75bd86955000f8312283f9f855 252 Gene3D G3DSA:1.10.3720.10 54 250 5.4E-30 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_03895 c8b76c75bd86955000f8312283f9f855 252 SUPERFAMILY SSF161098 59 241 1.31E-29 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_03895 c8b76c75bd86955000f8312283f9f855 252 TIGRFAM TIGR01097 PhnE: phosphonate ABC transporter, permease protein PhnE 10 251 9.3E-71 T 14-10-2018 IPR005769 ABC transporter, permease PhnE/PtxC GO:0005887|GO:0015604|GO:0015716 PhaeoP54_03895 c8b76c75bd86955000f8312283f9f855 252 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 81 250 3.2E-16 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PhaeoP54_00212 2c28433bd96babb07289c9fcaa4a10bf 237 Gene3D G3DSA:2.40.10.10 34 137 3.6E-24 T 14-10-2018 PhaeoP54_00212 2c28433bd96babb07289c9fcaa4a10bf 237 SUPERFAMILY SSF50494 1 233 1.02E-27 T 14-10-2018 IPR009003 Peptidase S1, PA clan PhaeoP54_00212 2c28433bd96babb07289c9fcaa4a10bf 237 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 60 65 - T 14-10-2018 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 PhaeoP54_00212 2c28433bd96babb07289c9fcaa4a10bf 237 SMART SM00020 30 230 3.1E-4 T 14-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 PhaeoP54_00212 2c28433bd96babb07289c9fcaa4a10bf 237 Gene3D G3DSA:2.40.10.10 30 195 3.6E-24 T 14-10-2018 PhaeoP54_00212 2c28433bd96babb07289c9fcaa4a10bf 237 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 50 65 2.5E-6 T 14-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 PhaeoP54_00212 2c28433bd96babb07289c9fcaa4a10bf 237 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 115 129 2.5E-6 T 14-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 PhaeoP54_00212 2c28433bd96babb07289c9fcaa4a10bf 237 Pfam PF00089 Trypsin 39 157 4.0E-15 T 14-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 PhaeoP54_02502 284a10abbeaa6907d12d59cda970c607 122 Gene3D G3DSA:3.30.70.100 24 122 2.9E-33 T 14-10-2018 PhaeoP54_02502 284a10abbeaa6907d12d59cda970c607 122 SUPERFAMILY SSF54909 25 119 3.43E-18 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel PhaeoP54_02502 284a10abbeaa6907d12d59cda970c607 122 Pfam PF03992 Antibiotic biosynthesis monooxygenase 29 96 1.1E-10 T 14-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain PhaeoP54_00693 060090400ec0ae3132bd5a042c22140f 333 Gene3D G3DSA:3.40.50.2300 56 304 8.1E-59 T 14-10-2018 PhaeoP54_00693 060090400ec0ae3132bd5a042c22140f 333 SUPERFAMILY SSF47413 2 60 3.68E-16 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 PhaeoP54_00693 060090400ec0ae3132bd5a042c22140f 333 Gene3D G3DSA:3.40.50.2300 161 288 8.1E-59 T 14-10-2018 PhaeoP54_00693 060090400ec0ae3132bd5a042c22140f 333 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 49 1.9E-15 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 PhaeoP54_00693 060090400ec0ae3132bd5a042c22140f 333 SMART SM00354 2 72 1.9E-21 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 PhaeoP54_00693 060090400ec0ae3132bd5a042c22140f 333 Gene3D G3DSA:1.10.260.40 1 55 3.4E-20 T 14-10-2018 PhaeoP54_00693 060090400ec0ae3132bd5a042c22140f 333 Pfam PF13377 Periplasmic binding protein-like domain 170 327 5.2E-29 T 14-10-2018 PhaeoP54_00693 060090400ec0ae3132bd5a042c22140f 333 SUPERFAMILY SSF53822 61 330 5.89E-55 T 14-10-2018 IPR028082 Periplasmic binding protein-like I PhaeoP54_00245 b59af2042f2b7407c869d07469778ff5 348 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PhaeoP54_00245 b59af2042f2b7407c869d07469778ff5 348 Gene3D G3DSA:3.40.50.300 4 222 1.1E-67 T 14-10-2018 PhaeoP54_00245 b59af2042f2b7407c869d07469778ff5 348 SUPERFAMILY SSF50331 238 347 1.21E-21 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal PhaeoP54_00245 b59af2042f2b7407c869d07469778ff5 348 Pfam PF00005 ABC transporter 22 162 2.2E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PhaeoP54_00245 b59af2042f2b7407c869d07469778ff5 348 SMART SM00382 29 212 2.5E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_00245 b59af2042f2b7407c869d07469778ff5 348 SUPERFAMILY SSF52540 4 243 9.9E-88 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_00245 b59af2042f2b7407c869d07469778ff5 348 Gene3D G3DSA:2.40.50.140 280 332 1.6E-23 T 14-10-2018 PhaeoP54_00245 b59af2042f2b7407c869d07469778ff5 348 Pfam PF08402 TOBE domain 273 340 5.0E-6 T 14-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 PhaeoP54_00245 b59af2042f2b7407c869d07469778ff5 348 Gene3D G3DSA:2.40.50.940 223 341 1.6E-23 T 14-10-2018 PhaeoP54_03960 62c8434fea59b620de6a0b52b61d3e5f 485 ProSitePatterns PS00079 Multicopper oxidases signature 1. 461 481 - T 14-10-2018 IPR033138 Multicopper oxidases, conserved site PhaeoP54_03960 62c8434fea59b620de6a0b52b61d3e5f 485 Pfam PF07732 Multicopper oxidase 57 171 2.5E-29 T 14-10-2018 IPR011707 Multicopper oxidase, type 3 GO:0005507 PhaeoP54_03960 62c8434fea59b620de6a0b52b61d3e5f 485 SUPERFAMILY SSF49503 67 194 9.32E-28 T 14-10-2018 IPR008972 Cupredoxin PhaeoP54_03960 62c8434fea59b620de6a0b52b61d3e5f 485 SUPERFAMILY SSF49503 327 483 4.74E-26 T 14-10-2018 IPR008972 Cupredoxin PhaeoP54_03960 62c8434fea59b620de6a0b52b61d3e5f 485 Gene3D G3DSA:2.60.40.420 173 317 7.6E-18 T 14-10-2018 IPR008972 Cupredoxin PhaeoP54_03960 62c8434fea59b620de6a0b52b61d3e5f 485 Gene3D G3DSA:2.60.40.420 328 484 8.3E-32 T 14-10-2018 IPR008972 Cupredoxin PhaeoP54_03960 62c8434fea59b620de6a0b52b61d3e5f 485 SUPERFAMILY SSF49503 173 296 1.63E-10 T 14-10-2018 IPR008972 Cupredoxin PhaeoP54_03960 62c8434fea59b620de6a0b52b61d3e5f 485 Gene3D G3DSA:2.60.40.420 53 170 2.2E-31 T 14-10-2018 IPR008972 Cupredoxin PhaeoP54_03960 62c8434fea59b620de6a0b52b61d3e5f 485 Pfam PF07731 Multicopper oxidase 392 482 4.7E-19 T 14-10-2018 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 PhaeoP54_03960 62c8434fea59b620de6a0b52b61d3e5f 485 ProSitePatterns PS00080 Multicopper oxidases signature 2. 466 477 - T 14-10-2018 IPR002355 Multicopper oxidase, copper-binding site GO:0005507 PhaeoP54_01981 2dccdfcd0f66d14b6598dd6dcf4518e6 399 Gene3D G3DSA:1.20.1250.20 216 398 9.8E-16 T 14-10-2018 PhaeoP54_01981 2dccdfcd0f66d14b6598dd6dcf4518e6 399 SUPERFAMILY SSF103473 18 396 4.32E-30 T 14-10-2018 IPR036259 MFS transporter superfamily PhaeoP54_01981 2dccdfcd0f66d14b6598dd6dcf4518e6 399 Gene3D G3DSA:1.20.1250.20 16 199 2.4E-11 T 14-10-2018 PhaeoP54_01521 431d9423e857d64c7b268027dac7ea6d 152 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 14-10-2018 IPR030489 Transcription regulator Rrf2-type, conserved site PhaeoP54_01521 431d9423e857d64c7b268027dac7ea6d 152 Gene3D G3DSA:1.10.10.10 1 139 7.3E-41 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_01521 431d9423e857d64c7b268027dac7ea6d 152 SUPERFAMILY SSF46785 2 135 9.73E-30 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_01521 431d9423e857d64c7b268027dac7ea6d 152 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 133 1.9E-35 T 14-10-2018 IPR000944 Transcription regulator Rrf2-type PhaeoP54_01521 431d9423e857d64c7b268027dac7ea6d 152 Pfam PF02082 Transcriptional regulator 1 83 3.3E-26 T 14-10-2018 IPR000944 Transcription regulator Rrf2-type PhaeoP54_01463 7ab52c260ab9a65f438063bd65bdfa68 337 PIRSF PIRSF006621 3 328 1.2E-100 T 14-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 PhaeoP54_01463 7ab52c260ab9a65f438063bd65bdfa68 337 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 96 114 - T 14-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 PhaeoP54_01463 7ab52c260ab9a65f438063bd65bdfa68 337 Pfam PF01207 Dihydrouridine synthase (Dus) 16 316 8.7E-104 T 14-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 PhaeoP54_01463 7ab52c260ab9a65f438063bd65bdfa68 337 Gene3D G3DSA:3.20.20.70 9 245 1.2E-74 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PhaeoP54_01463 7ab52c260ab9a65f438063bd65bdfa68 337 SUPERFAMILY SSF51395 12 316 3.3E-80 T 14-10-2018 PhaeoP54_01463 7ab52c260ab9a65f438063bd65bdfa68 337 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 6 317 2.0E-108 T 14-10-2018 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 PhaeoP54_00383 4172a5bdfd809400b33df9ce8624efd5 391 ProSitePatterns PS00099 Thiolases active site. 372 385 - T 14-10-2018 IPR020610 Thiolase, active site GO:0016747 PhaeoP54_00383 4172a5bdfd809400b33df9ce8624efd5 391 SUPERFAMILY SSF53901 1 264 1.44E-65 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 PhaeoP54_00383 4172a5bdfd809400b33df9ce8624efd5 391 SUPERFAMILY SSF53901 270 390 2.98E-41 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 PhaeoP54_00383 4172a5bdfd809400b33df9ce8624efd5 391 Pfam PF00108 Thiolase, N-terminal domain 5 260 4.7E-58 T 14-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 PhaeoP54_00383 4172a5bdfd809400b33df9ce8624efd5 391 PIRSF PIRSF000429 1 391 4.4E-113 T 14-10-2018 IPR002155 Thiolase GO:0016747 PhaeoP54_00383 4172a5bdfd809400b33df9ce8624efd5 391 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 389 1.5E-120 T 14-10-2018 IPR002155 Thiolase GO:0016747 PhaeoP54_00383 4172a5bdfd809400b33df9ce8624efd5 391 ProSitePatterns PS00737 Thiolases signature 2. 337 353 - T 14-10-2018 IPR020613 Thiolase, conserved site GO:0016747 PhaeoP54_00383 4172a5bdfd809400b33df9ce8624efd5 391 Gene3D G3DSA:3.40.47.10 6 274 1.6E-134 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 PhaeoP54_00383 4172a5bdfd809400b33df9ce8624efd5 391 Pfam PF02803 Thiolase, C-terminal domain 269 389 7.8E-44 T 14-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 PhaeoP54_00383 4172a5bdfd809400b33df9ce8624efd5 391 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 86 104 - T 14-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 PhaeoP54_00383 4172a5bdfd809400b33df9ce8624efd5 391 Gene3D G3DSA:3.40.47.10 137 385 1.6E-134 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 PhaeoP54_01261 39ba44a8b1460cf0053e19396a06d519 444 SUPERFAMILY SSF46548 11 153 8.37E-35 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 PhaeoP54_01261 39ba44a8b1460cf0053e19396a06d519 444 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 328 344 4.3E-12 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PhaeoP54_01261 39ba44a8b1460cf0053e19396a06d519 444 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 405 423 4.3E-12 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PhaeoP54_01261 39ba44a8b1460cf0053e19396a06d519 444 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 144 166 4.3E-12 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PhaeoP54_01261 39ba44a8b1460cf0053e19396a06d519 444 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 274 298 4.3E-12 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PhaeoP54_01261 39ba44a8b1460cf0053e19396a06d519 444 Gene3D G3DSA:3.50.50.60 143 263 5.8E-26 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PhaeoP54_01261 39ba44a8b1460cf0053e19396a06d519 444 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 143 431 8.3E-33 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PhaeoP54_01261 39ba44a8b1460cf0053e19396a06d519 444 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 22 131 4.0E-36 T 14-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 PhaeoP54_01261 39ba44a8b1460cf0053e19396a06d519 444 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 145 164 4.8E-16 T 14-10-2018 PhaeoP54_01261 39ba44a8b1460cf0053e19396a06d519 444 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 278 296 4.8E-16 T 14-10-2018 PhaeoP54_01261 39ba44a8b1460cf0053e19396a06d519 444 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 395 417 4.8E-16 T 14-10-2018 PhaeoP54_01261 39ba44a8b1460cf0053e19396a06d519 444 SUPERFAMILY SSF51971 141 381 1.0E-48 T 14-10-2018 PhaeoP54_01261 39ba44a8b1460cf0053e19396a06d519 444 Gene3D G3DSA:3.50.50.60 371 439 1.1E-19 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PhaeoP54_01261 39ba44a8b1460cf0053e19396a06d519 444 Gene3D G3DSA:1.10.1060.10 5 142 2.4E-38 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 PhaeoP54_01261 39ba44a8b1460cf0053e19396a06d519 444 Gene3D G3DSA:3.50.50.60 276 370 1.1E-19 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PhaeoP54_00939 32e7b1fa52db3bc2706beb59a31bb2ae 597 ProSitePatterns PS01135 FtsZ protein signature 2. 100 121 - T 14-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 PhaeoP54_00939 32e7b1fa52db3bc2706beb59a31bb2ae 597 Pfam PF12327 FtsZ family, C-terminal domain 225 320 8.0E-39 T 14-10-2018 IPR024757 Cell division protein FtsZ, C-terminal PhaeoP54_00939 32e7b1fa52db3bc2706beb59a31bb2ae 597 SMART SM00864 16 208 3.2E-109 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 PhaeoP54_00939 32e7b1fa52db3bc2706beb59a31bb2ae 597 Gene3D G3DSA:3.40.50.1440 6 223 1.7E-78 T 14-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 PhaeoP54_00939 32e7b1fa52db3bc2706beb59a31bb2ae 597 Gene3D G3DSA:3.30.1330.20 224 330 3.7E-38 T 14-10-2018 IPR037103 Tubulin/FtsZ, C-terminal domain superfamily Reactome: R-HSA-380320 PhaeoP54_00939 32e7b1fa52db3bc2706beb59a31bb2ae 597 SUPERFAMILY SSF52490 15 211 1.44E-68 T 14-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 PhaeoP54_00939 32e7b1fa52db3bc2706beb59a31bb2ae 597 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 12 403 37.501 T 14-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 PhaeoP54_00939 32e7b1fa52db3bc2706beb59a31bb2ae 597 PRINTS PR00423 Cell division protein FtsZ signature 215 236 1.4E-51 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 PhaeoP54_00939 32e7b1fa52db3bc2706beb59a31bb2ae 597 PRINTS PR00423 Cell division protein FtsZ signature 101 121 1.4E-51 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 PhaeoP54_00939 32e7b1fa52db3bc2706beb59a31bb2ae 597 PRINTS PR00423 Cell division protein FtsZ signature 129 150 1.4E-51 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 PhaeoP54_00939 32e7b1fa52db3bc2706beb59a31bb2ae 597 PRINTS PR00423 Cell division protein FtsZ signature 192 214 1.4E-51 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 PhaeoP54_00939 32e7b1fa52db3bc2706beb59a31bb2ae 597 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 11 324 1.1E-124 T 14-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 PhaeoP54_00939 32e7b1fa52db3bc2706beb59a31bb2ae 597 ProSitePatterns PS01134 FtsZ protein signature 1. 47 81 - T 14-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 PhaeoP54_00939 32e7b1fa52db3bc2706beb59a31bb2ae 597 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 16 176 4.1E-38 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 PhaeoP54_00939 32e7b1fa52db3bc2706beb59a31bb2ae 597 SUPERFAMILY SSF55307 207 320 6.64E-43 T 14-10-2018 IPR008280 Tubulin/FtsZ, C-terminal Reactome: R-HSA-380320 PhaeoP54_00939 32e7b1fa52db3bc2706beb59a31bb2ae 597 SMART SM00865 210 328 2.3E-56 T 14-10-2018 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-380320 PhaeoP54_03256 358e87f8d28bc7362106fd3f77140304 114 Gene3D G3DSA:3.30.750.24 1 110 3.6E-27 T 14-10-2018 IPR036513 STAS domain superfamily PhaeoP54_03256 358e87f8d28bc7362106fd3f77140304 114 Pfam PF01740 STAS domain 7 106 1.8E-14 T 14-10-2018 IPR002645 STAS domain PhaeoP54_03256 358e87f8d28bc7362106fd3f77140304 114 TIGRFAM TIGR00377 ant_ant_sig: anti-anti-sigma factor 2 102 1.8E-17 T 14-10-2018 IPR003658 Anti-sigma factor antagonist GO:0006355|GO:0045152 PhaeoP54_03256 358e87f8d28bc7362106fd3f77140304 114 SUPERFAMILY SSF52091 1 107 2.94E-24 T 14-10-2018 IPR036513 STAS domain superfamily PhaeoP54_03035 68d5597845352538f1a16a5a3075d951 205 Gene3D G3DSA:3.40.1370.10 2 205 1.7E-68 T 14-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 PhaeoP54_03035 68d5597845352538f1a16a5a3075d951 205 SUPERFAMILY SSF52166 1 204 3.53E-67 T 14-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 PhaeoP54_03035 68d5597845352538f1a16a5a3075d951 205 Pfam PF00573 Ribosomal protein L4/L1 family 16 202 3.1E-58 T 14-10-2018 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 PhaeoP54_03035 68d5597845352538f1a16a5a3075d951 205 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 9 205 29.123 T 14-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PhaeoP54_03035 68d5597845352538f1a16a5a3075d951 205 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 16 201 1.2E-62 T 14-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PhaeoP54_00985 b90a7722a5730f904fdd79496ce4c0ef 388 PIRSF PIRSF005962 1 387 9.8E-118 T 14-10-2018 IPR017439 Amidohydrolase GO:0016787 PhaeoP54_00985 b90a7722a5730f904fdd79496ce4c0ef 388 Pfam PF07687 Peptidase dimerisation domain 188 287 2.5E-9 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain PhaeoP54_00985 b90a7722a5730f904fdd79496ce4c0ef 388 Gene3D G3DSA:3.30.70.360 184 299 1.4E-132 T 14-10-2018 PhaeoP54_00985 b90a7722a5730f904fdd79496ce4c0ef 388 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 14 373 5.6E-104 T 14-10-2018 IPR017439 Amidohydrolase GO:0016787 PhaeoP54_00985 b90a7722a5730f904fdd79496ce4c0ef 388 Gene3D G3DSA:3.40.630.10 16 370 1.4E-132 T 14-10-2018 PhaeoP54_00985 b90a7722a5730f904fdd79496ce4c0ef 388 SUPERFAMILY SSF53187 2 384 1.29E-84 T 14-10-2018 PhaeoP54_00985 b90a7722a5730f904fdd79496ce4c0ef 388 Pfam PF01546 Peptidase family M20/M25/M40 76 382 4.9E-34 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 PhaeoP54_00985 b90a7722a5730f904fdd79496ce4c0ef 388 SUPERFAMILY SSF55031 186 300 1.01E-27 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain PhaeoP54_01751 b453437449db6d1978221622e5032ae0 438 Gene3D G3DSA:4.10.320.10 129 181 6.7E-17 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 PhaeoP54_01751 b453437449db6d1978221622e5032ae0 438 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 14-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 PhaeoP54_01751 b453437449db6d1978221622e5032ae0 438 SUPERFAMILY SSF52777 211 437 6.23E-80 T 14-10-2018 PhaeoP54_01751 b453437449db6d1978221622e5032ae0 438 Gene3D G3DSA:2.40.50.100 2 103 3.6E-32 T 14-10-2018 PhaeoP54_01751 b453437449db6d1978221622e5032ae0 438 Pfam PF00364 Biotin-requiring enzyme 4 77 1.8E-21 T 14-10-2018 IPR000089 Biotin/lipoyl attachment PhaeoP54_01751 b453437449db6d1978221622e5032ae0 438 TIGRFAM TIGR01349 PDHac_trf_mito: pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase 4 437 1.2E-163 T 14-10-2018 IPR006257 Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex GO:0004742|GO:0006090|GO:0045254 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00620+2.3.1.12|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-70268 PhaeoP54_01751 b453437449db6d1978221622e5032ae0 438 Pfam PF02817 e3 binding domain 135 170 1.9E-16 T 14-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 PhaeoP54_01751 b453437449db6d1978221622e5032ae0 438 SUPERFAMILY SSF51230 1 97 1.57E-29 T 14-10-2018 IPR011053 Single hybrid motif PhaeoP54_01751 b453437449db6d1978221622e5032ae0 438 Gene3D G3DSA:3.30.559.10 192 436 7.1E-90 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 PhaeoP54_01751 b453437449db6d1978221622e5032ae0 438 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 210 437 6.0E-79 T 14-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 PhaeoP54_01751 b453437449db6d1978221622e5032ae0 438 SUPERFAMILY SSF47005 130 173 3.14E-12 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 PhaeoP54_01690 5d6ffd76ad84df58480ada2617ad9f04 269 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 67 75 - T 14-10-2018 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 PhaeoP54_01690 5d6ffd76ad84df58480ada2617ad9f04 269 Gene3D G3DSA:3.40.50.1860 95 217 1.3E-70 T 14-10-2018 PhaeoP54_01690 5d6ffd76ad84df58480ada2617ad9f04 269 Gene3D G3DSA:3.40.50.1860 3 260 1.3E-70 T 14-10-2018 PhaeoP54_01690 5d6ffd76ad84df58480ada2617ad9f04 269 Pfam PF01177 Asp/Glu/Hydantoin racemase 3 225 6.0E-23 T 14-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 PhaeoP54_01690 5d6ffd76ad84df58480ada2617ad9f04 269 SUPERFAMILY SSF53681 120 266 5.23E-28 T 14-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 PhaeoP54_01690 5d6ffd76ad84df58480ada2617ad9f04 269 SUPERFAMILY SSF53681 1 105 2.26E-29 T 14-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 PhaeoP54_01690 5d6ffd76ad84df58480ada2617ad9f04 269 Hamap MF_00258 Glutamate racemase [murI]. 1 263 27.421 T 14-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 PhaeoP54_01801 0cb623f28ebc9245153bcc9b8877eeee 422 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 333 351 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site PhaeoP54_01801 0cb623f28ebc9245153bcc9b8877eeee 422 SUPERFAMILY SSF51120 295 402 1.7E-25 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal PhaeoP54_01801 0cb623f28ebc9245153bcc9b8877eeee 422 SUPERFAMILY SSF51120 108 317 3.49E-10 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal PhaeoP54_01801 0cb623f28ebc9245153bcc9b8877eeee 422 Gene3D G3DSA:2.150.10.10 249 302 1.2E-8 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal PhaeoP54_01801 0cb623f28ebc9245153bcc9b8877eeee 422 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 336 353 0.0065 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_01801 0cb623f28ebc9245153bcc9b8877eeee 422 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 292 308 0.092 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_01801 0cb623f28ebc9245153bcc9b8877eeee 422 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 319 335 5.2E-4 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_01801 0cb623f28ebc9245153bcc9b8877eeee 422 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 274 290 2.8 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_01801 0cb623f28ebc9245153bcc9b8877eeee 422 PRINTS PR00313 NodO calcium binding signature 346 355 5.6E-11 T 14-10-2018 PhaeoP54_01801 0cb623f28ebc9245153bcc9b8877eeee 422 PRINTS PR00313 NodO calcium binding signature 328 336 5.6E-11 T 14-10-2018 PhaeoP54_01801 0cb623f28ebc9245153bcc9b8877eeee 422 PRINTS PR00313 NodO calcium binding signature 289 300 5.6E-11 T 14-10-2018 PhaeoP54_01801 0cb623f28ebc9245153bcc9b8877eeee 422 PRINTS PR00313 NodO calcium binding signature 319 327 5.6E-11 T 14-10-2018 PhaeoP54_01801 0cb623f28ebc9245153bcc9b8877eeee 422 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 315 333 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site PhaeoP54_01801 0cb623f28ebc9245153bcc9b8877eeee 422 Gene3D G3DSA:2.150.10.10 303 421 1.5E-29 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal PhaeoP54_00720 29016dfe7d8ba372ea9bf67148362f89 257 Gene3D G3DSA:1.10.287.70 25 221 2.3E-24 T 14-10-2018 PhaeoP54_00720 29016dfe7d8ba372ea9bf67148362f89 257 SUPERFAMILY SSF81324 26 217 1.78E-23 T 14-10-2018 PhaeoP54_00720 29016dfe7d8ba372ea9bf67148362f89 257 Pfam PF07885 Ion channel 146 217 4.7E-13 T 14-10-2018 IPR013099 Potassium channel domain PhaeoP54_01840 83db17a2f145a8152440cbe485d6cd95 602 SMART SM00382 385 571 5.8E-18 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_01840 83db17a2f145a8152440cbe485d6cd95 602 Pfam PF00664 ABC transporter transmembrane region 41 314 2.0E-33 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 PhaeoP54_01840 83db17a2f145a8152440cbe485d6cd95 602 Gene3D G3DSA:3.40.50.300 351 602 4.5E-97 T 14-10-2018 PhaeoP54_01840 83db17a2f145a8152440cbe485d6cd95 602 Gene3D G3DSA:1.20.1560.10 26 350 1.3E-119 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 PhaeoP54_01840 83db17a2f145a8152440cbe485d6cd95 602 ProSitePatterns PS00211 ABC transporters family signature. 497 511 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PhaeoP54_01840 83db17a2f145a8152440cbe485d6cd95 602 SUPERFAMILY SSF90123 22 343 7.46E-61 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 PhaeoP54_01840 83db17a2f145a8152440cbe485d6cd95 602 Pfam PF00005 ABC transporter 376 525 1.6E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PhaeoP54_01840 83db17a2f145a8152440cbe485d6cd95 602 SUPERFAMILY SSF52540 349 595 1.88E-92 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_02899 57998a493ad52b66e7d5caebe0c2531c 695 Pfam PF00122 E1-E2 ATPase 215 392 2.0E-41 T 14-10-2018 PhaeoP54_02899 57998a493ad52b66e7d5caebe0c2531c 695 Gene3D G3DSA:3.40.50.1000 392 631 8.9E-63 T 14-10-2018 IPR023214 HAD superfamily PhaeoP54_02899 57998a493ad52b66e7d5caebe0c2531c 695 Gene3D G3DSA:3.40.1110.10 422 524 8.9E-63 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 PhaeoP54_02899 57998a493ad52b66e7d5caebe0c2531c 695 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 176 694 2.9E-102 T 14-10-2018 PhaeoP54_02899 57998a493ad52b66e7d5caebe0c2531c 695 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 262 276 6.7E-17 T 14-10-2018 PhaeoP54_02899 57998a493ad52b66e7d5caebe0c2531c 695 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 412 426 6.7E-17 T 14-10-2018 PhaeoP54_02899 57998a493ad52b66e7d5caebe0c2531c 695 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 615 627 6.7E-17 T 14-10-2018 PhaeoP54_02899 57998a493ad52b66e7d5caebe0c2531c 695 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 592 611 6.7E-17 T 14-10-2018 PhaeoP54_02899 57998a493ad52b66e7d5caebe0c2531c 695 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 539 549 6.7E-17 T 14-10-2018 PhaeoP54_02899 57998a493ad52b66e7d5caebe0c2531c 695 Gene3D G3DSA:3.30.70.100 1 67 7.4E-13 T 14-10-2018 PhaeoP54_02899 57998a493ad52b66e7d5caebe0c2531c 695 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 185 429 1.1E-30 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 PhaeoP54_02899 57998a493ad52b66e7d5caebe0c2531c 695 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 519 676 4.5E-30 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 PhaeoP54_02899 57998a493ad52b66e7d5caebe0c2531c 695 ProSitePatterns PS01047 Heavy-metal-associated domain. 5 34 - T 14-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 PhaeoP54_02899 57998a493ad52b66e7d5caebe0c2531c 695 Pfam PF00403 Heavy-metal-associated domain 5 61 1.5E-8 T 14-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 PhaeoP54_02899 57998a493ad52b66e7d5caebe0c2531c 695 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 150 694 1.3E-149 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 PhaeoP54_02899 57998a493ad52b66e7d5caebe0c2531c 695 SUPERFAMILY SSF81665 313 653 2.35E-11 T 14-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 PhaeoP54_02899 57998a493ad52b66e7d5caebe0c2531c 695 SUPERFAMILY SSF81653 220 312 2.35E-20 T 14-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 PhaeoP54_02899 57998a493ad52b66e7d5caebe0c2531c 695 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 414 420 - T 14-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 PhaeoP54_02899 57998a493ad52b66e7d5caebe0c2531c 695 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 131 695 4.8E-150 T 14-10-2018 PhaeoP54_02899 57998a493ad52b66e7d5caebe0c2531c 695 Gene3D G3DSA:2.70.150.20 205 316 2.6E-28 T 14-10-2018 PhaeoP54_02899 57998a493ad52b66e7d5caebe0c2531c 695 SUPERFAMILY SSF55008 3 66 7.98E-13 T 14-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 PhaeoP54_02899 57998a493ad52b66e7d5caebe0c2531c 695 SUPERFAMILY SSF56784 410 692 4.8E-39 T 14-10-2018 IPR036412 HAD-like superfamily PhaeoP54_02899 57998a493ad52b66e7d5caebe0c2531c 695 Pfam PF00702 haloacid dehalogenase-like hydrolase 408 605 5.1E-32 T 14-10-2018 PhaeoP54_02899 57998a493ad52b66e7d5caebe0c2531c 695 PRINTS PR00943 Copper-transporting ATPase signature 335 349 7.3E-6 T 14-10-2018 PhaeoP54_02899 57998a493ad52b66e7d5caebe0c2531c 695 PRINTS PR00943 Copper-transporting ATPase signature 43 63 7.3E-6 T 14-10-2018 PhaeoP54_02899 57998a493ad52b66e7d5caebe0c2531c 695 PRINTS PR00943 Copper-transporting ATPase signature 15 29 7.3E-6 T 14-10-2018 PhaeoP54_02899 57998a493ad52b66e7d5caebe0c2531c 695 PRINTS PR00943 Copper-transporting ATPase signature 569 586 7.3E-6 T 14-10-2018 PhaeoP54_02899 57998a493ad52b66e7d5caebe0c2531c 695 PRINTS PR00943 Copper-transporting ATPase signature 395 410 7.3E-6 T 14-10-2018 PhaeoP54_02606 475abb1025e63a36740fbf743695b33d 340 Pfam PF01594 AI-2E family transporter 14 322 3.0E-34 T 14-10-2018 IPR002549 Transmembrane protein TqsA-like PhaeoP54_00540 b5f5729c130005afcf2705aec3feb62b 136 SUPERFAMILY SSF46458 12 120 3.88E-25 T 14-10-2018 IPR009050 Globin-like superfamily PhaeoP54_00540 b5f5729c130005afcf2705aec3feb62b 136 Gene3D G3DSA:1.10.490.10 9 126 2.3E-31 T 14-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 PhaeoP54_01411 869d98e55216f69ee5ddbad834a7c77c 261 Hamap MF_00387 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase [lpxA]. 1 258 40.877 T 14-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 PhaeoP54_01411 869d98e55216f69ee5ddbad834a7c77c 261 Gene3D G3DSA:2.160.10.10 1 185 1.5E-47 T 14-10-2018 PhaeoP54_01411 869d98e55216f69ee5ddbad834a7c77c 261 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 105 137 8.7E-4 T 14-10-2018 IPR001451 Hexapeptide repeat PhaeoP54_01411 869d98e55216f69ee5ddbad834a7c77c 261 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 13 48 7.1E-9 T 14-10-2018 IPR001451 Hexapeptide repeat PhaeoP54_01411 869d98e55216f69ee5ddbad834a7c77c 261 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 140 169 0.0025 T 14-10-2018 IPR001451 Hexapeptide repeat PhaeoP54_01411 869d98e55216f69ee5ddbad834a7c77c 261 SUPERFAMILY SSF51161 2 254 1.67E-69 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily PhaeoP54_01411 869d98e55216f69ee5ddbad834a7c77c 261 PIRSF PIRSF000456 1 260 4.5E-101 T 14-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 PhaeoP54_01411 869d98e55216f69ee5ddbad834a7c77c 261 TIGRFAM TIGR01852 lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 4 256 4.8E-94 T 14-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 PhaeoP54_01411 869d98e55216f69ee5ddbad834a7c77c 261 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 176 255 1.5E-19 T 14-10-2018 IPR029098 UDP N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00540+2.3.1.129 PhaeoP54_01411 869d98e55216f69ee5ddbad834a7c77c 261 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 149 177 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 PhaeoP54_01411 869d98e55216f69ee5ddbad834a7c77c 261 Gene3D G3DSA:1.20.1180.10 194 258 3.7E-14 T 14-10-2018 IPR037157 UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily KEGG: 00540+2.3.1.129 PhaeoP54_01025 586d7fcea06ecf48d06ff9f5ca2c7f6f 479 TIGRFAM TIGR01770 NDH_I_N: proton-translocating NADH-quinone oxidoreductase, chain N 7 450 9.0E-141 T 14-10-2018 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 PhaeoP54_01025 586d7fcea06ecf48d06ff9f5ca2c7f6f 479 Pfam PF00361 Proton-conducting membrane transporter 123 417 5.4E-87 T 14-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PhaeoP54_01025 586d7fcea06ecf48d06ff9f5ca2c7f6f 479 Hamap MF_00445 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic [ndhB]. 4 466 17.915 T 14-10-2018 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 PhaeoP54_01025 586d7fcea06ecf48d06ff9f5ca2c7f6f 479 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 71 96 1.4E-7 T 14-10-2018 PhaeoP54_01025 586d7fcea06ecf48d06ff9f5ca2c7f6f 479 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 410 429 1.4E-7 T 14-10-2018 PhaeoP54_01025 586d7fcea06ecf48d06ff9f5ca2c7f6f 479 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 305 317 1.4E-7 T 14-10-2018 PhaeoP54_01025 586d7fcea06ecf48d06ff9f5ca2c7f6f 479 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 213 234 1.4E-7 T 14-10-2018 PhaeoP54_02371 d8929e49b4a8458dcda7d48b9b76cb81 166 PIRSF PIRSF001338 5 165 5.1E-68 T 14-10-2018 IPR024694 PurE, prokaryotic type GO:0006189 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234 PhaeoP54_02371 d8929e49b4a8458dcda7d48b9b76cb81 166 Gene3D G3DSA:3.40.50.7700 2 165 1.2E-71 T 14-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 PhaeoP54_02371 d8929e49b4a8458dcda7d48b9b76cb81 166 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 10 159 1.5E-64 T 14-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 PhaeoP54_02371 d8929e49b4a8458dcda7d48b9b76cb81 166 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 10 163 32.946 T 14-10-2018 IPR033747 Class I PurE PhaeoP54_02371 d8929e49b4a8458dcda7d48b9b76cb81 166 Pfam PF00731 AIR carboxylase 9 155 6.6E-65 T 14-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 PhaeoP54_02371 d8929e49b4a8458dcda7d48b9b76cb81 166 SUPERFAMILY SSF52255 9 162 1.83E-64 T 14-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 PhaeoP54_02371 d8929e49b4a8458dcda7d48b9b76cb81 166 SMART SM01001 8 159 1.3E-98 T 14-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 PhaeoP54_01094 681f2c182dde6f5f181fc1c40379df4f 220 Pfam PF04079 Segregation and condensation complex subunit ScpB 28 181 3.5E-47 T 14-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 PhaeoP54_01094 681f2c182dde6f5f181fc1c40379df4f 220 PIRSF PIRSF019345 11 217 4.5E-50 T 14-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 PhaeoP54_01094 681f2c182dde6f5f181fc1c40379df4f 220 SUPERFAMILY SSF46785 99 173 1.32E-24 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_01094 681f2c182dde6f5f181fc1c40379df4f 220 Gene3D G3DSA:1.10.10.10 96 193 3.6E-32 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_01094 681f2c182dde6f5f181fc1c40379df4f 220 Gene3D G3DSA:1.10.10.10 19 95 1.6E-7 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_01094 681f2c182dde6f5f181fc1c40379df4f 220 SUPERFAMILY SSF46785 21 94 2.95E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_01094 681f2c182dde6f5f181fc1c40379df4f 220 TIGRFAM TIGR00281 TIGR00281: segregation and condensation protein B 27 186 9.6E-32 T 14-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 PhaeoP54_02979 c7667d0d3b6c8c9425b3c77da908b825 150 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 76 126 7.4E-11 T 14-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 PhaeoP54_02979 c7667d0d3b6c8c9425b3c77da908b825 150 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 35 150 13.677 T 14-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 PhaeoP54_02979 c7667d0d3b6c8c9425b3c77da908b825 150 SUPERFAMILY SSF54211 39 148 2.78E-20 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold PhaeoP54_02979 c7667d0d3b6c8c9425b3c77da908b825 150 ProSitePatterns PS00648 Bacterial ribonuclease P protein component signature. 88 102 - T 14-10-2018 IPR020539 Ribonuclease P, conserved site GO:0004526 PhaeoP54_02979 c7667d0d3b6c8c9425b3c77da908b825 150 Pfam PF00825 Ribonuclease P 38 147 7.8E-19 T 14-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 PhaeoP54_02979 c7667d0d3b6c8c9425b3c77da908b825 150 Gene3D G3DSA:3.30.230.10 36 149 4.0E-21 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PhaeoP54_02979 c7667d0d3b6c8c9425b3c77da908b825 150 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 79 146 8.0E-6 T 14-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 PhaeoP54_03364 e33c594d6cff7b49782cd760e0fd810a 149 Pfam PF01641 SelR domain 12 128 8.7E-46 T 14-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 PhaeoP54_03364 e33c594d6cff7b49782cd760e0fd810a 149 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 5 130 35.439 T 14-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 PhaeoP54_03364 e33c594d6cff7b49782cd760e0fd810a 149 SUPERFAMILY SSF51316 6 143 3.77E-56 T 14-10-2018 IPR011057 Mss4-like superfamily PhaeoP54_03364 e33c594d6cff7b49782cd760e0fd810a 149 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 9 138 1.0E-56 T 14-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 PhaeoP54_03364 e33c594d6cff7b49782cd760e0fd810a 149 Gene3D G3DSA:2.170.150.20 3 147 1.2E-53 T 14-10-2018 PhaeoP54_03637 bea846523c7610494c84ea7972fc16d5 122 Gene3D G3DSA:3.30.2310.20 2 108 1.2E-10 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily PhaeoP54_00359 78537501ff88b9eacefa483d6f7e86fd 239 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 177 191 3.5E-7 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PhaeoP54_00359 78537501ff88b9eacefa483d6f7e86fd 239 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 207 219 3.5E-7 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PhaeoP54_00359 78537501ff88b9eacefa483d6f7e86fd 239 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 191 207 3.5E-7 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PhaeoP54_00359 78537501ff88b9eacefa483d6f7e86fd 239 SMART SM00421 174 231 3.0E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PhaeoP54_00359 78537501ff88b9eacefa483d6f7e86fd 239 Pfam PF00196 Bacterial regulatory proteins, luxR family 176 230 1.4E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PhaeoP54_00359 78537501ff88b9eacefa483d6f7e86fd 239 SUPERFAMILY SSF46894 167 237 2.72E-15 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PhaeoP54_00359 78537501ff88b9eacefa483d6f7e86fd 239 Pfam PF03472 Autoinducer binding domain 21 161 1.6E-35 T 14-10-2018 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain PhaeoP54_00359 78537501ff88b9eacefa483d6f7e86fd 239 Gene3D G3DSA:1.10.10.10 171 237 4.3E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_00359 78537501ff88b9eacefa483d6f7e86fd 239 SUPERFAMILY SSF75516 10 166 5.23E-46 T 14-10-2018 IPR036693 Transcription factor LuxR-like, autoinducer-binding domain superfamily PhaeoP54_00359 78537501ff88b9eacefa483d6f7e86fd 239 Gene3D G3DSA:3.30.450.80 3 170 2.6E-33 T 14-10-2018 IPR036693 Transcription factor LuxR-like, autoinducer-binding domain superfamily PhaeoP54_03693 9aec9d0467137da0e5c502db89296d0b 518 SUPERFAMILY SSF53850 26 517 8.87E-126 T 14-10-2018 PhaeoP54_03693 9aec9d0467137da0e5c502db89296d0b 518 PIRSF PIRSF002741 3 507 1.2E-92 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 PhaeoP54_03693 9aec9d0467137da0e5c502db89296d0b 518 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 68 430 1.3E-85 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain PhaeoP54_03693 9aec9d0467137da0e5c502db89296d0b 518 Gene3D G3DSA:3.90.76.10 34 190 4.0E-121 T 14-10-2018 PhaeoP54_03693 9aec9d0467137da0e5c502db89296d0b 518 Gene3D G3DSA:3.10.105.10 268 491 4.0E-121 T 14-10-2018 PhaeoP54_03693 9aec9d0467137da0e5c502db89296d0b 518 Gene3D G3DSA:3.40.190.10 191 499 4.0E-121 T 14-10-2018 PhaeoP54_02051 65c0966fb36164db8a3e1f3991fadb06 688 Pfam PF01568 Molydopterin dinucleotide binding domain 572 676 1.0E-16 T 14-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 PhaeoP54_02051 65c0966fb36164db8a3e1f3991fadb06 688 SUPERFAMILY SSF53706 14 568 9.82E-129 T 14-10-2018 PhaeoP54_02051 65c0966fb36164db8a3e1f3991fadb06 688 Pfam PF00384 Molybdopterin oxidoreductase 70 478 3.3E-48 T 14-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PhaeoP54_02051 65c0966fb36164db8a3e1f3991fadb06 688 SMART SM00926 11 67 2.7E-9 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PhaeoP54_02051 65c0966fb36164db8a3e1f3991fadb06 688 Gene3D G3DSA:2.40.40.20 558 688 8.5E-22 T 14-10-2018 PhaeoP54_02051 65c0966fb36164db8a3e1f3991fadb06 688 SUPERFAMILY SSF50692 561 686 2.94E-21 T 14-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily PhaeoP54_02051 65c0966fb36164db8a3e1f3991fadb06 688 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 15 56 9.6E-7 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PhaeoP54_02051 65c0966fb36164db8a3e1f3991fadb06 688 Gene3D G3DSA:3.30.2070.10 438 520 1.5E-108 T 14-10-2018 PhaeoP54_02051 65c0966fb36164db8a3e1f3991fadb06 688 Gene3D G3DSA:3.40.50.740 81 483 1.5E-108 T 14-10-2018 PhaeoP54_02051 65c0966fb36164db8a3e1f3991fadb06 688 Gene3D G3DSA:3.40.228.10 149 553 1.5E-108 T 14-10-2018 PhaeoP54_02051 65c0966fb36164db8a3e1f3991fadb06 688 Gene3D G3DSA:2.20.25.90 6 72 1.7E-5 T 14-10-2018 PhaeoP54_00738 5f8744b3730534902e699ce3ac4ecd36 326 SUPERFAMILY SSF51735 131 289 7.53E-21 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PhaeoP54_00738 5f8744b3730534902e699ce3ac4ecd36 326 Pfam PF00107 Zinc-binding dehydrogenase 170 285 4.9E-9 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 PhaeoP54_00738 5f8744b3730534902e699ce3ac4ecd36 326 SUPERFAMILY SSF50129 1 169 4.87E-44 T 14-10-2018 IPR011032 GroES-like superfamily PhaeoP54_00738 5f8744b3730534902e699ce3ac4ecd36 326 Gene3D G3DSA:3.40.50.720 143 270 2.5E-67 T 14-10-2018 PhaeoP54_00738 5f8744b3730534902e699ce3ac4ecd36 326 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 25 125 3.5E-27 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 PhaeoP54_00738 5f8744b3730534902e699ce3ac4ecd36 326 Gene3D G3DSA:3.90.180.10 10 309 2.5E-67 T 14-10-2018 PhaeoP54_03818 ded33a120a0d4bc192226475e8fa4c12 415 Gene3D G3DSA:1.10.150.130 111 220 1.4E-7 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal PhaeoP54_03818 ded33a120a0d4bc192226475e8fa4c12 415 Gene3D G3DSA:1.10.443.10 221 408 4.8E-34 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 PhaeoP54_03818 ded33a120a0d4bc192226475e8fa4c12 415 SUPERFAMILY SSF56349 123 402 6.47E-38 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 PhaeoP54_03818 ded33a120a0d4bc192226475e8fa4c12 415 Pfam PF00589 Phage integrase family 226 395 4.1E-26 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 PhaeoP54_03818 ded33a120a0d4bc192226475e8fa4c12 415 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 122 201 1.0E-7 T 14-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 PhaeoP54_03178 8b0d7f99a7c9693a0ba74e5bf0bb255d 306 SUPERFAMILY SSF56524 55 302 7.19E-90 T 14-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 PhaeoP54_03178 8b0d7f99a7c9693a0ba74e5bf0bb255d 306 Hamap MF_01206 Protein-methionine-sulfoxide reductase catalytic subunit MsrP [msrP]. 7 306 52.401 T 14-10-2018 IPR022867 Protein-methionine-sulfoxide reductase subunit MsrP GO:0016667|GO:0030091|GO:0043546|GO:0055114 PhaeoP54_03178 8b0d7f99a7c9693a0ba74e5bf0bb255d 306 Pfam PF00174 Oxidoreductase molybdopterin binding domain 86 241 2.5E-31 T 14-10-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 PhaeoP54_03178 8b0d7f99a7c9693a0ba74e5bf0bb255d 306 Gene3D G3DSA:3.90.420.10 44 306 3.6E-105 T 14-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 PhaeoP54_03321 69965b2c82e8d67531cf8e72e6835c55 341 SUPERFAMILY SSF47413 8 65 1.97E-17 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 PhaeoP54_03321 69965b2c82e8d67531cf8e72e6835c55 341 SMART SM00354 8 78 2.5E-26 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 PhaeoP54_03321 69965b2c82e8d67531cf8e72e6835c55 341 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 69 315 3.6E-23 T 14-10-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain PhaeoP54_03321 69965b2c82e8d67531cf8e72e6835c55 341 SUPERFAMILY SSF53822 67 328 1.3E-47 T 14-10-2018 IPR028082 Periplasmic binding protein-like I PhaeoP54_03321 69965b2c82e8d67531cf8e72e6835c55 341 Gene3D G3DSA:3.40.50.2300 70 318 1.4E-72 T 14-10-2018 PhaeoP54_03321 69965b2c82e8d67531cf8e72e6835c55 341 Gene3D G3DSA:1.10.260.40 1 66 2.7E-27 T 14-10-2018 PhaeoP54_03321 69965b2c82e8d67531cf8e72e6835c55 341 Gene3D G3DSA:3.40.50.2300 167 297 1.4E-72 T 14-10-2018 PhaeoP54_03321 69965b2c82e8d67531cf8e72e6835c55 341 Pfam PF00356 Bacterial regulatory proteins, lacI family 10 55 1.3E-18 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 PhaeoP54_02816 a0fe2922a7acf5e73b56331e1ba568b1 247 Pfam PF00583 Acetyltransferase (GNAT) family 172 232 7.3E-7 T 14-10-2018 IPR000182 GNAT domain PhaeoP54_02816 a0fe2922a7acf5e73b56331e1ba568b1 247 SUPERFAMILY SSF55729 60 240 1.63E-18 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase PhaeoP54_02816 a0fe2922a7acf5e73b56331e1ba568b1 247 Gene3D G3DSA:3.40.630.30 14 246 4.2E-25 T 14-10-2018 PhaeoP54_02328 54e7e2f109c628dfb1c5db5c38388c8d 98 Gene3D G3DSA:3.30.1200.10 12 98 3.6E-19 T 14-10-2018 IPR036591 YggU-like superfamily PhaeoP54_02328 54e7e2f109c628dfb1c5db5c38388c8d 98 SUPERFAMILY SSF69786 19 95 3.66E-17 T 14-10-2018 IPR036591 YggU-like superfamily PhaeoP54_02328 54e7e2f109c628dfb1c5db5c38388c8d 98 Hamap MF_00634 UPF0235 protein YggU [yggU]. 16 98 12.893 T 14-10-2018 IPR003746 Protein of unknown function DUF167 PhaeoP54_02328 54e7e2f109c628dfb1c5db5c38388c8d 98 Pfam PF02594 Uncharacterised ACR, YggU family COG1872 20 94 4.9E-20 T 14-10-2018 IPR003746 Protein of unknown function DUF167 PhaeoP54_02328 54e7e2f109c628dfb1c5db5c38388c8d 98 SMART SM01152 17 98 2.2E-19 T 14-10-2018 IPR003746 Protein of unknown function DUF167 PhaeoP54_03870 966944cc9fdfb5052c177a23f4f25bcb 85 SUPERFAMILY SSF47413 14 73 1.53E-11 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 PhaeoP54_03870 966944cc9fdfb5052c177a23f4f25bcb 85 Pfam PF13560 Helix-turn-helix domain 15 68 9.1E-9 T 14-10-2018 PhaeoP54_03870 966944cc9fdfb5052c177a23f4f25bcb 85 Gene3D G3DSA:1.10.260.40 1 81 4.1E-25 T 14-10-2018 PhaeoP54_03870 966944cc9fdfb5052c177a23f4f25bcb 85 SMART SM00530 16 71 3.8E-7 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PhaeoP54_03934 04d7a4065239d3e7ca951823de402670 365 Gene3D G3DSA:4.10.1250.10 232 276 4.3E-22 T 14-10-2018 PhaeoP54_03934 04d7a4065239d3e7ca951823de402670 365 SUPERFAMILY SSF101790 272 365 1.03E-24 T 14-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal PhaeoP54_03934 04d7a4065239d3e7ca951823de402670 365 Gene3D G3DSA:3.30.70.1400 56 139 3.2E-80 T 14-10-2018 PhaeoP54_03934 04d7a4065239d3e7ca951823de402670 365 Pfam PF01571 Aminomethyltransferase folate-binding domain 10 254 2.5E-82 T 14-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain PhaeoP54_03934 04d7a4065239d3e7ca951823de402670 365 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 6 360 5.6E-100 T 14-10-2018 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 PhaeoP54_03934 04d7a4065239d3e7ca951823de402670 365 PIRSF PIRSF006487 1 365 2.4E-78 T 14-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 PhaeoP54_03934 04d7a4065239d3e7ca951823de402670 365 SUPERFAMILY SSF103025 6 278 5.97E-85 T 14-10-2018 PhaeoP54_03934 04d7a4065239d3e7ca951823de402670 365 Gene3D G3DSA:3.30.1360.120 9 231 3.2E-80 T 14-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 PhaeoP54_03934 04d7a4065239d3e7ca951823de402670 365 Gene3D G3DSA:2.40.30.110 278 355 3.8E-25 T 14-10-2018 PhaeoP54_03934 04d7a4065239d3e7ca951823de402670 365 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 263 355 2.6E-21 T 14-10-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 PhaeoP54_02728 73c3a3b5e0321340b01b9a53be745bc6 467 Pfam PF01565 FAD binding domain 51 187 5.0E-39 T 14-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 PhaeoP54_02728 73c3a3b5e0321340b01b9a53be745bc6 467 Gene3D G3DSA:1.10.45.10 426 465 1.2E-10 T 14-10-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 PhaeoP54_02728 73c3a3b5e0321340b01b9a53be745bc6 467 Gene3D G3DSA:3.30.70.2740 343 425 1.0E-11 T 14-10-2018 PhaeoP54_02728 73c3a3b5e0321340b01b9a53be745bc6 467 SUPERFAMILY SSF56176 15 225 2.99E-68 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 PhaeoP54_02728 73c3a3b5e0321340b01b9a53be745bc6 467 Pfam PF02913 FAD linked oxidases, C-terminal domain 224 464 5.3E-64 T 14-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 PhaeoP54_02728 73c3a3b5e0321340b01b9a53be745bc6 467 SUPERFAMILY SSF55103 228 465 4.41E-69 T 14-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 PhaeoP54_02728 73c3a3b5e0321340b01b9a53be745bc6 467 Gene3D G3DSA:3.30.465.40 21 244 2.8E-74 T 14-10-2018 PhaeoP54_01728 e46d9754da5d02cece7573da6c2ba5ec 381 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 335 354 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 PhaeoP54_01728 e46d9754da5d02cece7573da6c2ba5ec 381 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 123 135 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 PhaeoP54_01728 e46d9754da5d02cece7573da6c2ba5ec 381 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 227 377 7.9E-47 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PhaeoP54_01728 e46d9754da5d02cece7573da6c2ba5ec 381 Gene3D G3DSA:1.10.540.10 1 118 4.2E-33 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 PhaeoP54_01728 e46d9754da5d02cece7573da6c2ba5ec 381 Gene3D G3DSA:2.40.110.10 121 232 1.3E-37 T 14-10-2018 PhaeoP54_01728 e46d9754da5d02cece7573da6c2ba5ec 381 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 121 215 8.2E-25 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 PhaeoP54_01728 e46d9754da5d02cece7573da6c2ba5ec 381 SUPERFAMILY SSF47203 225 378 8.86E-57 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 PhaeoP54_01728 e46d9754da5d02cece7573da6c2ba5ec 381 SUPERFAMILY SSF56645 2 240 1.19E-72 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 PhaeoP54_01728 e46d9754da5d02cece7573da6c2ba5ec 381 Gene3D G3DSA:1.20.140.10 233 381 4.7E-54 T 14-10-2018 PhaeoP54_01728 e46d9754da5d02cece7573da6c2ba5ec 381 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 116 3.1E-25 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 PhaeoP54_01728 e46d9754da5d02cece7573da6c2ba5ec 381 PIRSF PIRSF016578 6 190 1.1E-6 T 14-10-2018 PhaeoP54_01728 e46d9754da5d02cece7573da6c2ba5ec 381 PIRSF PIRSF016578 217 380 7.3E-11 T 14-10-2018 PhaeoP54_03842 f9ac1b762e867b119c7bb30052296760 217 Pfam PF01694 Rhomboid family 73 203 3.1E-17 T 14-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 PhaeoP54_03842 f9ac1b762e867b119c7bb30052296760 217 Gene3D G3DSA:1.20.1540.10 72 209 4.1E-13 T 14-10-2018 IPR035952 Rhomboid-like superfamily PhaeoP54_03842 f9ac1b762e867b119c7bb30052296760 217 SUPERFAMILY SSF144091 29 205 3.66E-22 T 14-10-2018 PhaeoP54_01402 a15de76c254a41f4890e72526ddbd774 187 Hamap MF_00040 Ribosome-recycling factor [frr]. 4 187 23.912 T 14-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 PhaeoP54_01402 a15de76c254a41f4890e72526ddbd774 187 SUPERFAMILY SSF55194 8 186 2.22E-64 T 14-10-2018 IPR036191 RRF superfamily Reactome: R-HSA-5419276 PhaeoP54_01402 a15de76c254a41f4890e72526ddbd774 187 Gene3D G3DSA:3.30.1360.40 34 108 2.1E-61 T 14-10-2018 PhaeoP54_01402 a15de76c254a41f4890e72526ddbd774 187 Gene3D G3DSA:1.10.132.20 15 184 2.1E-61 T 14-10-2018 PhaeoP54_01402 a15de76c254a41f4890e72526ddbd774 187 TIGRFAM TIGR00496 frr: ribosome recycling factor 14 187 3.8E-56 T 14-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 PhaeoP54_01402 a15de76c254a41f4890e72526ddbd774 187 Pfam PF01765 Ribosome recycling factor 23 185 2.0E-58 T 14-10-2018 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 PhaeoP54_02187 7adb1a50b9611dc95cac34caa5a5df18 756 Gene3D G3DSA:1.10.287.130 356 453 8.6E-15 T 14-10-2018 PhaeoP54_02187 7adb1a50b9611dc95cac34caa5a5df18 756 SUPERFAMILY SSF55785 209 261 5.12E-5 T 14-10-2018 IPR035965 PAS domain superfamily PhaeoP54_02187 7adb1a50b9611dc95cac34caa5a5df18 756 SUPERFAMILY SSF47384 376 456 1.22E-13 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 PhaeoP54_02187 7adb1a50b9611dc95cac34caa5a5df18 756 SUPERFAMILY SSF52172 638 751 5.33E-11 T 14-10-2018 IPR011006 CheY-like superfamily PhaeoP54_02187 7adb1a50b9611dc95cac34caa5a5df18 756 SUPERFAMILY SSF55874 446 607 4.06E-38 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PhaeoP54_02187 7adb1a50b9611dc95cac34caa5a5df18 756 PRINTS PR00344 Bacterial sensor protein C-terminal signature 535 549 2.9E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PhaeoP54_02187 7adb1a50b9611dc95cac34caa5a5df18 756 PRINTS PR00344 Bacterial sensor protein C-terminal signature 593 606 2.9E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PhaeoP54_02187 7adb1a50b9611dc95cac34caa5a5df18 756 PRINTS PR00344 Bacterial sensor protein C-terminal signature 553 563 2.9E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PhaeoP54_02187 7adb1a50b9611dc95cac34caa5a5df18 756 PRINTS PR00344 Bacterial sensor protein C-terminal signature 569 587 2.9E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PhaeoP54_02187 7adb1a50b9611dc95cac34caa5a5df18 756 SMART SM00388 390 455 8.8E-14 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PhaeoP54_02187 7adb1a50b9611dc95cac34caa5a5df18 756 Pfam PF12860 PAS fold 93 206 7.9E-12 T 14-10-2018 PhaeoP54_02187 7adb1a50b9611dc95cac34caa5a5df18 756 Pfam PF12860 PAS fold 227 356 2.1E-21 T 14-10-2018 PhaeoP54_02187 7adb1a50b9611dc95cac34caa5a5df18 756 Gene3D G3DSA:3.40.50.2300 637 753 9.4E-10 T 14-10-2018 PhaeoP54_02187 7adb1a50b9611dc95cac34caa5a5df18 756 Pfam PF00512 His Kinase A (phospho-acceptor) domain 390 455 1.0E-11 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PhaeoP54_02187 7adb1a50b9611dc95cac34caa5a5df18 756 SMART SM00387 499 609 1.0E-26 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PhaeoP54_02187 7adb1a50b9611dc95cac34caa5a5df18 756 Gene3D G3DSA:3.30.450.20 208 355 2.7E-6 T 14-10-2018 PhaeoP54_02187 7adb1a50b9611dc95cac34caa5a5df18 756 Gene3D G3DSA:3.30.565.10 454 610 1.5E-34 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PhaeoP54_02187 7adb1a50b9611dc95cac34caa5a5df18 756 SMART SM00448 636 748 0.0083 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PhaeoP54_02187 7adb1a50b9611dc95cac34caa5a5df18 756 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 500 607 1.3E-19 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PhaeoP54_02408 3e5ff2ef3ec501fc9ed255b5b603666c 306 Gene3D G3DSA:1.10.3660.10 181 288 4.5E-33 T 14-10-2018 PhaeoP54_02408 3e5ff2ef3ec501fc9ed255b5b603666c 306 SUPERFAMILY SSF48179 178 288 2.83E-31 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 PhaeoP54_02408 3e5ff2ef3ec501fc9ed255b5b603666c 306 Gene3D G3DSA:3.40.50.720 6 180 2.1E-58 T 14-10-2018 PhaeoP54_02408 3e5ff2ef3ec501fc9ed255b5b603666c 306 SUPERFAMILY SSF51735 8 174 1.3E-51 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PhaeoP54_02408 3e5ff2ef3ec501fc9ed255b5b603666c 306 Pfam PF02153 Prephenate dehydrogenase 21 279 5.8E-75 T 14-10-2018 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 PhaeoP54_03317 248027e7ab543b5fd76d8bf4b671f2d4 179 PRINTS PR01489 Gram-negative bacterial RTX toxin-activating protein C signature 11 27 1.1E-24 T 14-10-2018 IPR003996 RTX toxin-activating protein C, bacteria GO:0005737|GO:0009404|GO:0016746 PhaeoP54_03317 248027e7ab543b5fd76d8bf4b671f2d4 179 PRINTS PR01489 Gram-negative bacterial RTX toxin-activating protein C signature 53 71 1.1E-24 T 14-10-2018 IPR003996 RTX toxin-activating protein C, bacteria GO:0005737|GO:0009404|GO:0016746 PhaeoP54_03317 248027e7ab543b5fd76d8bf4b671f2d4 179 PRINTS PR01489 Gram-negative bacterial RTX toxin-activating protein C signature 75 97 1.1E-24 T 14-10-2018 IPR003996 RTX toxin-activating protein C, bacteria GO:0005737|GO:0009404|GO:0016746 PhaeoP54_03317 248027e7ab543b5fd76d8bf4b671f2d4 179 PRINTS PR01489 Gram-negative bacterial RTX toxin-activating protein C signature 131 152 1.1E-24 T 14-10-2018 IPR003996 RTX toxin-activating protein C, bacteria GO:0005737|GO:0009404|GO:0016746 PhaeoP54_03317 248027e7ab543b5fd76d8bf4b671f2d4 179 Pfam PF02794 RTX toxin acyltransferase family 11 133 8.7E-36 T 14-10-2018 IPR003996 RTX toxin-activating protein C, bacteria GO:0005737|GO:0009404|GO:0016746 PhaeoP54_03144 1f84b2fa42a36e7ab17271e0bb89b301 266 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 266 104.857 T 14-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 PhaeoP54_03144 1f84b2fa42a36e7ab17271e0bb89b301 266 Gene3D G3DSA:1.10.1270.20 206 266 1.3E-28 T 14-10-2018 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 PhaeoP54_03144 1f84b2fa42a36e7ab17271e0bb89b301 266 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 55 253 1.1E-54 T 14-10-2018 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 PhaeoP54_03144 1f84b2fa42a36e7ab17271e0bb89b301 266 Gene3D G3DSA:3.40.1280.10 33 205 1.0E-61 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal PhaeoP54_03144 1f84b2fa42a36e7ab17271e0bb89b301 266 PIRSF PIRSF000386 33 266 7.3E-90 T 14-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 PhaeoP54_03144 1f84b2fa42a36e7ab17271e0bb89b301 266 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 35 265 1.2E-82 T 14-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 PhaeoP54_03144 1f84b2fa42a36e7ab17271e0bb89b301 266 SUPERFAMILY SSF75217 33 263 9.81E-93 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases PhaeoP54_03056 36702c802543be6f40a676fdf52f45d9 232 Pfam PF00687 Ribosomal protein L1p/L10e family 31 220 4.2E-56 T 14-10-2018 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein PhaeoP54_03056 36702c802543be6f40a676fdf52f45d9 232 PIRSF PIRSF002155 1 227 2.0E-76 T 14-10-2018 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PhaeoP54_03056 36702c802543be6f40a676fdf52f45d9 232 Gene3D G3DSA:3.40.50.790 68 159 3.8E-81 T 14-10-2018 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich PhaeoP54_03056 36702c802543be6f40a676fdf52f45d9 232 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 228 9.5E-98 T 14-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 PhaeoP54_03056 36702c802543be6f40a676fdf52f45d9 232 Gene3D G3DSA:3.30.190.20 22 225 3.8E-81 T 14-10-2018 PhaeoP54_03056 36702c802543be6f40a676fdf52f45d9 232 SUPERFAMILY SSF56808 6 226 1.83E-80 T 14-10-2018 IPR023674 Ribosomal protein L1-like PhaeoP54_03056 36702c802543be6f40a676fdf52f45d9 232 ProSitePatterns PS01199 Ribosomal protein L1 signature. 120 139 - T 14-10-2018 IPR023673 Ribosomal protein L1, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PhaeoP54_03056 36702c802543be6f40a676fdf52f45d9 232 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 229 42.085 T 14-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 PhaeoP54_00242 c08b3ea991bd1f02919bb7a403e4cac4 433 SUPERFAMILY SSF53850 23 422 3.54E-67 T 14-10-2018 PhaeoP54_00242 c08b3ea991bd1f02919bb7a403e4cac4 433 Gene3D G3DSA:3.40.190.10 27 379 1.3E-109 T 14-10-2018 PhaeoP54_00242 c08b3ea991bd1f02919bb7a403e4cac4 433 Gene3D G3DSA:3.40.190.10 143 418 1.3E-109 T 14-10-2018 PhaeoP54_00242 c08b3ea991bd1f02919bb7a403e4cac4 433 Pfam PF13416 Bacterial extracellular solute-binding protein 42 355 9.6E-38 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein PhaeoP54_00101 65ff70a7f8ec32edad90606257efa5d0 356 Gene3D G3DSA:3.40.50.300 18 177 4.1E-20 T 14-10-2018 PhaeoP54_00101 65ff70a7f8ec32edad90606257efa5d0 356 Pfam PF03969 AFG1-like ATPase 5 354 1.8E-115 T 14-10-2018 IPR005654 ATPase, AFG1-like GO:0005524 PhaeoP54_00101 65ff70a7f8ec32edad90606257efa5d0 356 SUPERFAMILY SSF52540 52 185 2.08E-11 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_00220 1ea9fa9796ec7d271c7e885d0f055216 221 SMART SM00895 86 207 6.3E-15 T 14-10-2018 IPR011711 GntR, C-terminal PhaeoP54_00220 1ea9fa9796ec7d271c7e885d0f055216 221 SUPERFAMILY SSF46785 7 80 2.03E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_00220 1ea9fa9796ec7d271c7e885d0f055216 221 Pfam PF00392 Bacterial regulatory proteins, gntR family 18 76 8.7E-14 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PhaeoP54_00220 1ea9fa9796ec7d271c7e885d0f055216 221 Gene3D G3DSA:1.10.10.10 4 77 1.2E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_00220 1ea9fa9796ec7d271c7e885d0f055216 221 SMART SM00345 18 76 3.8E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PhaeoP54_00220 1ea9fa9796ec7d271c7e885d0f055216 221 SUPERFAMILY SSF48008 82 214 2.04E-24 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal PhaeoP54_00220 1ea9fa9796ec7d271c7e885d0f055216 221 Pfam PF07729 FCD domain 86 206 1.9E-23 T 14-10-2018 IPR011711 GntR, C-terminal PhaeoP54_00220 1ea9fa9796ec7d271c7e885d0f055216 221 Gene3D G3DSA:1.20.120.530 79 219 9.4E-30 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal PhaeoP54_00197 df0647544e6a38fecb431b4925719d09 80 Gene3D G3DSA:1.10.10.60 6 79 2.6E-12 T 14-10-2018 PhaeoP54_00197 df0647544e6a38fecb431b4925719d09 80 SUPERFAMILY SSF46689 4 79 6.99E-14 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PhaeoP54_00197 df0647544e6a38fecb431b4925719d09 80 Pfam PF01527 Transposase 6 69 3.1E-11 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 PhaeoP54_00657 df0647544e6a38fecb431b4925719d09 80 Gene3D G3DSA:1.10.10.60 6 79 2.6E-12 T 14-10-2018 PhaeoP54_00657 df0647544e6a38fecb431b4925719d09 80 SUPERFAMILY SSF46689 4 79 6.99E-14 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PhaeoP54_00657 df0647544e6a38fecb431b4925719d09 80 Pfam PF01527 Transposase 6 69 3.1E-11 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 PhaeoP54_02342 e337488be3305150158ea182d404ef27 293 SUPERFAMILY SSF53850 100 293 1.01E-20 T 14-10-2018 PhaeoP54_02342 e337488be3305150158ea182d404ef27 293 Gene3D G3DSA:3.40.190.10 168 265 9.5E-38 T 14-10-2018 PhaeoP54_02342 e337488be3305150158ea182d404ef27 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 13 72 4.0E-18 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PhaeoP54_02342 e337488be3305150158ea182d404ef27 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 49 60 8.0E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PhaeoP54_02342 e337488be3305150158ea182d404ef27 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 28 39 8.0E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PhaeoP54_02342 e337488be3305150158ea182d404ef27 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 49 8.0E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PhaeoP54_02342 e337488be3305150158ea182d404ef27 293 Gene3D G3DSA:3.40.190.10 108 281 9.5E-38 T 14-10-2018 PhaeoP54_02342 e337488be3305150158ea182d404ef27 293 SUPERFAMILY SSF46785 13 119 1.04E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_02342 e337488be3305150158ea182d404ef27 293 Gene3D G3DSA:1.10.10.10 12 99 4.0E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_02342 e337488be3305150158ea182d404ef27 293 Pfam PF03466 LysR substrate binding domain 99 293 5.4E-20 T 14-10-2018 IPR005119 LysR, substrate-binding PhaeoP54_03880 7c524fe6374404a95957cc45bf559d42 219 SUPERFAMILY SSF52833 41 208 9.98E-33 T 14-10-2018 IPR036249 Thioredoxin-like superfamily PhaeoP54_03880 7c524fe6374404a95957cc45bf559d42 219 Pfam PF13462 Thioredoxin 49 210 6.5E-21 T 14-10-2018 IPR012336 Thioredoxin-like fold PhaeoP54_03880 7c524fe6374404a95957cc45bf559d42 219 Gene3D G3DSA:3.40.30.10 42 216 5.1E-33 T 14-10-2018 PhaeoP54_00235 67fa9f6bacda8186d6be1f449bd7c97e 305 Pfam PF00753 Metallo-beta-lactamase superfamily 80 283 4.7E-18 T 14-10-2018 IPR001279 Metallo-beta-lactamase PhaeoP54_00235 67fa9f6bacda8186d6be1f449bd7c97e 305 SUPERFAMILY SSF56281 25 303 1.35E-39 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like PhaeoP54_00235 67fa9f6bacda8186d6be1f449bd7c97e 305 SMART SM00849 79 283 3.6E-15 T 14-10-2018 IPR001279 Metallo-beta-lactamase PhaeoP54_00235 67fa9f6bacda8186d6be1f449bd7c97e 305 Gene3D G3DSA:3.60.15.10 23 304 4.9E-81 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like PhaeoP54_03392 3626a49e2a7b35d1d267be71e4b6de1d 518 Gene3D G3DSA:3.40.190.10 192 323 1.2E-32 T 14-10-2018 PhaeoP54_03392 3626a49e2a7b35d1d267be71e4b6de1d 518 SUPERFAMILY SSF53850 82 369 1.76E-38 T 14-10-2018 PhaeoP54_03392 3626a49e2a7b35d1d267be71e4b6de1d 518 Gene3D G3DSA:3.40.190.10 135 353 1.2E-32 T 14-10-2018 PhaeoP54_03392 3626a49e2a7b35d1d267be71e4b6de1d 518 Pfam PF00691 OmpA family 411 508 2.3E-6 T 14-10-2018 IPR006665 OmpA-like domain PhaeoP54_03392 3626a49e2a7b35d1d267be71e4b6de1d 518 Gene3D G3DSA:3.30.1330.60 377 518 1.1E-16 T 14-10-2018 IPR036737 OmpA-like domain superfamily PhaeoP54_03392 3626a49e2a7b35d1d267be71e4b6de1d 518 Pfam PF12849 PBP superfamily domain 81 345 6.1E-15 T 14-10-2018 IPR024370 PBP domain PhaeoP54_03392 3626a49e2a7b35d1d267be71e4b6de1d 518 SUPERFAMILY SSF103088 398 517 5.36E-17 T 14-10-2018 IPR036737 OmpA-like domain superfamily PhaeoP54_00517 e1fa215f4a91c6544298102a1fce7e2f 123 TIGRFAM TIGR02962 hdxy_isourate: hydroxyisourate hydrolase 9 123 1.3E-38 T 14-10-2018 IPR014306 Hydroxyisourate hydrolase GO:0006144|GO:0033971 KEGG: 00230+3.5.2.17|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 PhaeoP54_00517 e1fa215f4a91c6544298102a1fce7e2f 123 SUPERFAMILY SSF49472 6 123 1.83E-42 T 14-10-2018 IPR036817 Transthyretin/hydroxyisourate hydrolase domain superfamily Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 PhaeoP54_00517 e1fa215f4a91c6544298102a1fce7e2f 123 Pfam PF00576 HIUase/Transthyretin family 10 122 9.6E-36 T 14-10-2018 IPR023416 Transthyretin/hydroxyisourate hydrolase domain Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 PhaeoP54_00517 e1fa215f4a91c6544298102a1fce7e2f 123 Gene3D G3DSA:2.60.40.180 2 123 2.3E-39 T 14-10-2018 IPR036817 Transthyretin/hydroxyisourate hydrolase domain superfamily Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 PhaeoP54_00517 e1fa215f4a91c6544298102a1fce7e2f 123 ProSitePatterns PS00768 Transthyretin signature 1. 13 28 - T 14-10-2018 IPR023418 Transthyretin, thyroxine binding site Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 PhaeoP54_00517 e1fa215f4a91c6544298102a1fce7e2f 123 ProSitePatterns PS00769 Transthyretin signature 2. 106 118 - T 14-10-2018 IPR023419 Transthyretin, conserved site Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 PhaeoP54_00517 e1fa215f4a91c6544298102a1fce7e2f 123 PRINTS PR00189 Transthyretin signature 101 123 1.8E-8 T 14-10-2018 IPR000895 Transthyretin/hydroxyisourate hydrolase Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 PhaeoP54_00517 e1fa215f4a91c6544298102a1fce7e2f 123 PRINTS PR00189 Transthyretin signature 9 29 1.8E-8 T 14-10-2018 IPR000895 Transthyretin/hydroxyisourate hydrolase Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 PhaeoP54_00628 b135587af828c5836adaaad10efda064 304 SUPERFAMILY SSF103481 42 148 1.31E-9 T 14-10-2018 PhaeoP54_00628 b135587af828c5836adaaad10efda064 304 Pfam PF00892 EamA-like transporter family 165 294 2.6E-16 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 PhaeoP54_00628 b135587af828c5836adaaad10efda064 304 Pfam PF00892 EamA-like transporter family 14 147 1.9E-19 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 PhaeoP54_00628 b135587af828c5836adaaad10efda064 304 SUPERFAMILY SSF103481 198 299 3.53E-12 T 14-10-2018 PhaeoP54_03002 d93c3069f089a36a1c542430b74f3f79 140 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 14-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PhaeoP54_03002 d93c3069f089a36a1c542430b74f3f79 140 Pfam PF01196 Ribosomal protein L17 20 116 8.6E-37 T 14-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PhaeoP54_03002 d93c3069f089a36a1c542430b74f3f79 140 SUPERFAMILY SSF64263 1 119 2.09E-50 T 14-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PhaeoP54_03002 d93c3069f089a36a1c542430b74f3f79 140 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 26.685 T 14-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PhaeoP54_03002 d93c3069f089a36a1c542430b74f3f79 140 Gene3D G3DSA:3.90.1030.10 1 117 3.3E-48 T 14-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PhaeoP54_03002 d93c3069f089a36a1c542430b74f3f79 140 TIGRFAM TIGR00059 L17: ribosomal protein bL17 6 117 2.1E-44 T 14-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PhaeoP54_00793 738110c54690f594c720967b11f63d6a 261 SUPERFAMILY SSF46785 3 74 1.91E-14 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_00793 738110c54690f594c720967b11f63d6a 261 Pfam PF00455 DeoR C terminal sensor domain 74 232 3.6E-49 T 14-10-2018 IPR014036 DeoR C-terminal sensor domain PhaeoP54_00793 738110c54690f594c720967b11f63d6a 261 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 1.1E-6 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 PhaeoP54_00793 738110c54690f594c720967b11f63d6a 261 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 1.1E-6 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 PhaeoP54_00793 738110c54690f594c720967b11f63d6a 261 Gene3D G3DSA:1.10.10.10 1 55 1.2E-8 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_00793 738110c54690f594c720967b11f63d6a 261 Pfam PF08220 DeoR-like helix-turn-helix domain 6 61 4.7E-17 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 PhaeoP54_00793 738110c54690f594c720967b11f63d6a 261 SUPERFAMILY SSF100950 74 232 3.21E-27 T 14-10-2018 IPR037171 NagB/RpiA transferase-like PhaeoP54_00793 738110c54690f594c720967b11f63d6a 261 SMART SM01134 72 233 4.2E-65 T 14-10-2018 PhaeoP54_00793 738110c54690f594c720967b11f63d6a 261 SMART SM00420 6 58 5.5E-17 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 PhaeoP54_03782 8333cb102d6db334483a113001eb1d2b 711 Gene3D G3DSA:3.30.565.10 372 556 1.4E-53 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PhaeoP54_03782 8333cb102d6db334483a113001eb1d2b 711 SMART SM00073 1 99 1.4E-30 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 PhaeoP54_03782 8333cb102d6db334483a113001eb1d2b 711 Gene3D G3DSA:1.10.287.560 309 371 2.2E-13 T 14-10-2018 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily GO:0000155|GO:0006935 PhaeoP54_03782 8333cb102d6db334483a113001eb1d2b 711 Pfam PF01584 CheW-like domain 562 691 2.4E-19 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 PhaeoP54_03782 8333cb102d6db334483a113001eb1d2b 711 SUPERFAMILY SSF50341 556 690 5.36E-25 T 14-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 PhaeoP54_03782 8333cb102d6db334483a113001eb1d2b 711 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 310 371 2.1E-15 T 14-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 PhaeoP54_03782 8333cb102d6db334483a113001eb1d2b 711 Pfam PF01627 Hpt domain 6 93 1.3E-18 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 PhaeoP54_03782 8333cb102d6db334483a113001eb1d2b 711 SUPERFAMILY SSF47226 5 126 1.83E-30 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 PhaeoP54_03782 8333cb102d6db334483a113001eb1d2b 711 SMART SM01231 308 371 6.1E-17 T 14-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 PhaeoP54_03782 8333cb102d6db334483a113001eb1d2b 711 PRINTS PR00344 Bacterial sensor protein C-terminal signature 461 475 4.1E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PhaeoP54_03782 8333cb102d6db334483a113001eb1d2b 711 PRINTS PR00344 Bacterial sensor protein C-terminal signature 517 535 4.1E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PhaeoP54_03782 8333cb102d6db334483a113001eb1d2b 711 PRINTS PR00344 Bacterial sensor protein C-terminal signature 541 554 4.1E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PhaeoP54_03782 8333cb102d6db334483a113001eb1d2b 711 SMART SM00387 416 557 1.6E-24 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PhaeoP54_03782 8333cb102d6db334483a113001eb1d2b 711 SMART SM00260 549 690 8.4E-32 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 PhaeoP54_03782 8333cb102d6db334483a113001eb1d2b 711 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 418 556 2.4E-18 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PhaeoP54_03782 8333cb102d6db334483a113001eb1d2b 711 SUPERFAMILY SSF55874 375 555 4.45E-36 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PhaeoP54_03782 8333cb102d6db334483a113001eb1d2b 711 SUPERFAMILY SSF47384 310 372 5.89E-12 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 PhaeoP54_03782 8333cb102d6db334483a113001eb1d2b 711 Gene3D G3DSA:2.30.30.40 557 685 4.0E-31 T 14-10-2018 PhaeoP54_03782 8333cb102d6db334483a113001eb1d2b 711 Gene3D G3DSA:1.20.120.160 2 135 6.2E-38 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 PhaeoP54_03782 8333cb102d6db334483a113001eb1d2b 711 Gene3D G3DSA:2.40.50.180 580 645 4.0E-31 T 14-10-2018 PhaeoP54_01262 7158e1fab9c4c7ab0a444d2139a99d52 434 Gene3D G3DSA:3.30.70.20 318 415 2.6E-22 T 14-10-2018 PhaeoP54_01262 7158e1fab9c4c7ab0a444d2139a99d52 434 SUPERFAMILY SSF51395 1 323 2.4E-74 T 14-10-2018 PhaeoP54_01262 7158e1fab9c4c7ab0a444d2139a99d52 434 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 380 391 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PhaeoP54_01262 7158e1fab9c4c7ab0a444d2139a99d52 434 Gene3D G3DSA:3.20.20.70 4 313 1.7E-102 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PhaeoP54_01262 7158e1fab9c4c7ab0a444d2139a99d52 434 TIGRFAM TIGR01037 pyrD_sub1_fam: dihydroorotate dehydrogenase family protein 6 322 7.6E-51 T 14-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 PhaeoP54_01262 7158e1fab9c4c7ab0a444d2139a99d52 434 Pfam PF14697 4Fe-4S dicluster domain 340 398 2.4E-23 T 14-10-2018 PhaeoP54_01262 7158e1fab9c4c7ab0a444d2139a99d52 434 Pfam PF01180 Dihydroorotate dehydrogenase 86 307 4.8E-29 T 14-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 PhaeoP54_01262 7158e1fab9c4c7ab0a444d2139a99d52 434 SUPERFAMILY SSF54862 339 405 1.57E-13 T 14-10-2018 PhaeoP54_01539 6bb1c36ab1fcc349dfbaa0e1283290f0 368 PIRSF PIRSF000729 3 368 7.0E-117 T 14-10-2018 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922 PhaeoP54_01539 6bb1c36ab1fcc349dfbaa0e1283290f0 368 Gene3D G3DSA:2.30.130.10 269 368 3.2E-29 T 14-10-2018 IPR036974 PUA domain superfamily GO:0003723 PhaeoP54_01539 6bb1c36ab1fcc349dfbaa0e1283290f0 368 SMART SM00359 279 361 8.5E-12 T 14-10-2018 IPR002478 PUA domain GO:0003723 PhaeoP54_01539 6bb1c36ab1fcc349dfbaa0e1283290f0 368 Gene3D G3DSA:3.40.1160.10 2 267 3.9E-78 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily PhaeoP54_01539 6bb1c36ab1fcc349dfbaa0e1283290f0 368 Pfam PF00696 Amino acid kinase family 8 238 9.2E-37 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 PhaeoP54_01539 6bb1c36ab1fcc349dfbaa0e1283290f0 368 ProSitePatterns PS00902 Glutamate 5-kinase signature. 211 228 - T 14-10-2018 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 PhaeoP54_01539 6bb1c36ab1fcc349dfbaa0e1283290f0 368 PRINTS PR00474 Glutamate 5-kinase family signature 80 108 3.7E-47 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 PhaeoP54_01539 6bb1c36ab1fcc349dfbaa0e1283290f0 368 PRINTS PR00474 Glutamate 5-kinase family signature 120 141 3.7E-47 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 PhaeoP54_01539 6bb1c36ab1fcc349dfbaa0e1283290f0 368 PRINTS PR00474 Glutamate 5-kinase family signature 46 60 3.7E-47 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 PhaeoP54_01539 6bb1c36ab1fcc349dfbaa0e1283290f0 368 PRINTS PR00474 Glutamate 5-kinase family signature 152 179 3.7E-47 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 PhaeoP54_01539 6bb1c36ab1fcc349dfbaa0e1283290f0 368 PRINTS PR00474 Glutamate 5-kinase family signature 213 233 3.7E-47 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 PhaeoP54_01539 6bb1c36ab1fcc349dfbaa0e1283290f0 368 Hamap MF_00456 Glutamate 5-kinase [proB]. 8 266 33.714 T 14-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 PhaeoP54_01539 6bb1c36ab1fcc349dfbaa0e1283290f0 368 Pfam PF01472 PUA domain 279 352 2.0E-17 T 14-10-2018 IPR002478 PUA domain GO:0003723 PhaeoP54_01539 6bb1c36ab1fcc349dfbaa0e1283290f0 368 SUPERFAMILY SSF88697 279 367 2.93E-22 T 14-10-2018 IPR015947 PUA-like superfamily PhaeoP54_01539 6bb1c36ab1fcc349dfbaa0e1283290f0 368 SUPERFAMILY SSF53633 8 259 1.2E-63 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily PhaeoP54_01539 6bb1c36ab1fcc349dfbaa0e1283290f0 368 TIGRFAM TIGR01027 proB: glutamate 5-kinase 8 367 6.2E-114 T 14-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 PhaeoP54_00694 79f1e9e24a4e3b8f02cb3de9ef046b5b 316 Gene3D G3DSA:3.40.50.2300 42 298 1.2E-68 T 14-10-2018 PhaeoP54_00694 79f1e9e24a4e3b8f02cb3de9ef046b5b 316 Pfam PF13407 Periplasmic binding protein domain 35 282 6.1E-38 T 14-10-2018 IPR025997 Periplasmic binding protein PhaeoP54_00694 79f1e9e24a4e3b8f02cb3de9ef046b5b 316 Gene3D G3DSA:3.40.50.2300 138 300 1.2E-68 T 14-10-2018 PhaeoP54_00694 79f1e9e24a4e3b8f02cb3de9ef046b5b 316 SUPERFAMILY SSF53822 32 307 3.87E-44 T 14-10-2018 IPR028082 Periplasmic binding protein-like I PhaeoP54_00234 43d5290243b39c8dfdf95f1c701384bc 386 Gene3D G3DSA:3.40.50.2300 26 366 6.5E-72 T 14-10-2018 PhaeoP54_00234 43d5290243b39c8dfdf95f1c701384bc 386 Pfam PF13458 Periplasmic binding protein 33 372 4.0E-63 T 14-10-2018 IPR028081 Leucine-binding protein domain PhaeoP54_00234 43d5290243b39c8dfdf95f1c701384bc 386 Gene3D G3DSA:3.40.50.2300 150 368 6.5E-72 T 14-10-2018 PhaeoP54_00234 43d5290243b39c8dfdf95f1c701384bc 386 SUPERFAMILY SSF53822 32 382 1.01E-68 T 14-10-2018 IPR028082 Periplasmic binding protein-like I PhaeoP54_02744 85077bb38f62fac0b064fd01d2dfea03 248 Gene3D G3DSA:3.40.50.300 2 247 4.3E-75 T 14-10-2018 PhaeoP54_02744 85077bb38f62fac0b064fd01d2dfea03 248 SMART SM00382 28 214 2.9E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_02744 85077bb38f62fac0b064fd01d2dfea03 248 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PhaeoP54_02744 85077bb38f62fac0b064fd01d2dfea03 248 SUPERFAMILY SSF52540 3 226 1.54E-65 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_02744 85077bb38f62fac0b064fd01d2dfea03 248 Pfam PF00005 ABC transporter 20 165 2.8E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PhaeoP54_00929 203cface72398ead4a186e738cbca842 393 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 6 386 1.6E-110 T 14-10-2018 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like PhaeoP54_00929 203cface72398ead4a186e738cbca842 393 Pfam PF03486 HI0933-like protein 4 387 8.2E-133 T 14-10-2018 PhaeoP54_00929 203cface72398ead4a186e738cbca842 393 Gene3D G3DSA:3.50.50.60 6 386 1.7E-116 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PhaeoP54_00929 203cface72398ead4a186e738cbca842 393 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 1.1E-6 T 14-10-2018 PhaeoP54_00929 203cface72398ead4a186e738cbca842 393 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 152 170 1.1E-6 T 14-10-2018 PhaeoP54_00929 203cface72398ead4a186e738cbca842 393 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 342 364 1.1E-6 T 14-10-2018 PhaeoP54_00929 203cface72398ead4a186e738cbca842 393 SUPERFAMILY SSF160996 189 335 3.01E-38 T 14-10-2018 PhaeoP54_00929 203cface72398ead4a186e738cbca842 393 Gene3D G3DSA:2.40.30.10 188 334 1.7E-116 T 14-10-2018 PhaeoP54_00929 203cface72398ead4a186e738cbca842 393 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 357 364 1.1E-5 T 14-10-2018 PhaeoP54_00929 203cface72398ead4a186e738cbca842 393 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 4 26 1.1E-5 T 14-10-2018 PhaeoP54_00929 203cface72398ead4a186e738cbca842 393 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 155 164 1.1E-5 T 14-10-2018 PhaeoP54_00929 203cface72398ead4a186e738cbca842 393 Gene3D G3DSA:1.10.8.260 258 317 1.7E-116 T 14-10-2018 IPR023166 HI0933-like insert domain superfamily PhaeoP54_00929 203cface72398ead4a186e738cbca842 393 SUPERFAMILY SSF51905 3 390 4.7E-53 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PhaeoP54_02941 1e1c38d0aa83812d25e94b532e00ddf0 321 Pfam PF13378 Enolase C-terminal domain-like 139 283 1.5E-26 T 14-10-2018 IPR029065 Enolase C-terminal domain-like PhaeoP54_02941 1e1c38d0aa83812d25e94b532e00ddf0 321 SUPERFAMILY SSF51604 115 321 3.93E-55 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily PhaeoP54_02941 1e1c38d0aa83812d25e94b532e00ddf0 321 Gene3D G3DSA:3.30.390.10 1 99 5.9E-30 T 14-10-2018 IPR029017 Enolase-like, N-terminal PhaeoP54_02941 1e1c38d0aa83812d25e94b532e00ddf0 321 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 4 107 5.0E-14 T 14-10-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain PhaeoP54_02941 1e1c38d0aa83812d25e94b532e00ddf0 321 Gene3D G3DSA:3.20.20.120 100 321 4.6E-56 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily PhaeoP54_02941 1e1c38d0aa83812d25e94b532e00ddf0 321 SUPERFAMILY SSF54826 2 107 1.01E-29 T 14-10-2018 PhaeoP54_02941 1e1c38d0aa83812d25e94b532e00ddf0 321 SMART SM00922 125 216 1.4E-15 T 14-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal PhaeoP54_03845 892bb6430c129c059a60372bab103adc 309 Pfam PF10686 Protein of unknown function (DUF2493) 181 251 2.9E-18 T 14-10-2018 IPR019627 Mycobacteriophage D29, Gp61 PhaeoP54_00686 5769020dc788d9c909f2a4987de45eb2 279 PIRSF PIRSF001359 1 279 3.0E-59 T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 PhaeoP54_00686 5769020dc788d9c909f2a4987de45eb2 279 Pfam PF01116 Fructose-bisphosphate aldolase class-II 5 274 9.7E-69 T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 PhaeoP54_00686 5769020dc788d9c909f2a4987de45eb2 279 SUPERFAMILY SSF51569 3 274 1.73E-80 T 14-10-2018 PhaeoP54_00686 5769020dc788d9c909f2a4987de45eb2 279 Gene3D G3DSA:3.20.20.70 1 279 8.9E-75 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PhaeoP54_01677 45023aef2b757fc3b70251af6edd881e 390 SMART SM00852 173 310 2.5E-34 T 14-10-2018 IPR001453 MoaB/Mog domain PhaeoP54_01677 45023aef2b757fc3b70251af6edd881e 390 Gene3D G3DSA:3.90.105.10 20 167 1.9E-113 T 14-10-2018 PhaeoP54_01677 45023aef2b757fc3b70251af6edd881e 390 Pfam PF03453 MoeA N-terminal region (domain I and II) 2 159 6.0E-38 T 14-10-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 PhaeoP54_01677 45023aef2b757fc3b70251af6edd881e 390 SUPERFAMILY SSF53218 170 315 9.68E-36 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily PhaeoP54_01677 45023aef2b757fc3b70251af6edd881e 390 Pfam PF03454 MoeA C-terminal region (domain IV) 324 389 1.5E-11 T 14-10-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 PhaeoP54_01677 45023aef2b757fc3b70251af6edd881e 390 Gene3D G3DSA:2.170.190.11 44 135 1.9E-113 T 14-10-2018 PhaeoP54_01677 45023aef2b757fc3b70251af6edd881e 390 Gene3D G3DSA:3.40.980.10 168 320 1.9E-113 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily PhaeoP54_01677 45023aef2b757fc3b70251af6edd881e 390 SUPERFAMILY SSF63867 322 388 3.66E-12 T 14-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 PhaeoP54_01677 45023aef2b757fc3b70251af6edd881e 390 Gene3D G3DSA:2.40.340.10 321 383 1.9E-113 T 14-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 PhaeoP54_01677 45023aef2b757fc3b70251af6edd881e 390 Pfam PF00994 Probable molybdopterin binding domain 173 309 9.0E-20 T 14-10-2018 IPR001453 MoaB/Mog domain PhaeoP54_01677 45023aef2b757fc3b70251af6edd881e 390 SUPERFAMILY SSF63882 1 168 3.14E-51 T 14-10-2018 IPR036135 MoeA, N-terminal and linker domain superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 PhaeoP54_02387 21da5acdf940170659afbc3c6c2999a9 291 Gene3D G3DSA:1.10.10.10 1 88 2.1E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_02387 21da5acdf940170659afbc3c6c2999a9 291 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 62 4.6E-17 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PhaeoP54_02387 21da5acdf940170659afbc3c6c2999a9 291 SUPERFAMILY SSF46785 3 83 5.29E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_02387 21da5acdf940170659afbc3c6c2999a9 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.8E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PhaeoP54_02387 21da5acdf940170659afbc3c6c2999a9 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.8E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PhaeoP54_02387 21da5acdf940170659afbc3c6c2999a9 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.8E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PhaeoP54_02387 21da5acdf940170659afbc3c6c2999a9 291 Gene3D G3DSA:3.40.190.10 149 254 4.0E-16 T 14-10-2018 PhaeoP54_02387 21da5acdf940170659afbc3c6c2999a9 291 SUPERFAMILY SSF53850 87 275 6.15E-18 T 14-10-2018 PhaeoP54_02387 21da5acdf940170659afbc3c6c2999a9 291 Gene3D G3DSA:3.40.190.10 128 275 4.0E-16 T 14-10-2018 PhaeoP54_02387 21da5acdf940170659afbc3c6c2999a9 291 Pfam PF03466 LysR substrate binding domain 92 274 3.2E-17 T 14-10-2018 IPR005119 LysR, substrate-binding PhaeoP54_03546 deba16d304136198c8d1332d4c60f091 268 Pfam PF02673 Bacitracin resistance protein BacA 7 260 1.0E-69 T 14-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 PhaeoP54_03546 deba16d304136198c8d1332d4c60f091 268 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 1 265 14.946 T 14-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 PhaeoP54_00665 a571b277191c80ace89ded7d4051a425 357 Pfam PF01409 tRNA synthetases class II core domain (F) 89 340 1.2E-97 T 14-10-2018 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 PhaeoP54_00665 a571b277191c80ace89ded7d4051a425 357 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 17 84 3.0E-19 T 14-10-2018 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 PhaeoP54_00665 a571b277191c80ace89ded7d4051a425 357 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 37 340 2.1E-99 T 14-10-2018 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 PhaeoP54_00665 a571b277191c80ace89ded7d4051a425 357 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 5 341 44.548 T 14-10-2018 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 PhaeoP54_00665 a571b277191c80ace89ded7d4051a425 357 SUPERFAMILY SSF46589 10 96 2.46E-18 T 14-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 PhaeoP54_00665 a571b277191c80ace89ded7d4051a425 357 Gene3D G3DSA:3.30.930.10 5 343 4.8E-110 T 14-10-2018 PhaeoP54_00665 a571b277191c80ace89ded7d4051a425 357 SUPERFAMILY SSF55681 89 342 1.03E-73 T 14-10-2018 PhaeoP54_00224 5dbab01b4e35a8159ddac425bbf3b261 278 Gene3D G3DSA:3.20.20.70 1 277 7.5E-111 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PhaeoP54_00224 5dbab01b4e35a8159ddac425bbf3b261 278 Pfam PF05853 beta-keto acid cleavage enzyme 4 273 2.3E-90 T 14-10-2018 IPR008567 3-keto-5-aminohexanoate cleavage enzyme GO:0016740|GO:0019475 KEGG: 00310+2.3.1.247 PhaeoP54_01422 bead297207f05d6a2d85ddd3e96e7300 291 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 9 20 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 PhaeoP54_01422 bead297207f05d6a2d85ddd3e96e7300 291 Gene3D G3DSA:3.40.50.620 3 290 3.0E-83 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PhaeoP54_01422 bead297207f05d6a2d85ddd3e96e7300 291 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 4 280 1.6E-48 T 14-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 PhaeoP54_01422 bead297207f05d6a2d85ddd3e96e7300 291 PRINTS PR00987 Glutamyl-tRNA synthetase signature 210 218 1.6E-16 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 PhaeoP54_01422 bead297207f05d6a2d85ddd3e96e7300 291 PRINTS PR00987 Glutamyl-tRNA synthetase signature 6 18 1.6E-16 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 PhaeoP54_01422 bead297207f05d6a2d85ddd3e96e7300 291 PRINTS PR00987 Glutamyl-tRNA synthetase signature 20 31 1.6E-16 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 PhaeoP54_01422 bead297207f05d6a2d85ddd3e96e7300 291 PRINTS PR00987 Glutamyl-tRNA synthetase signature 194 204 1.6E-16 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 PhaeoP54_01422 bead297207f05d6a2d85ddd3e96e7300 291 PRINTS PR00987 Glutamyl-tRNA synthetase signature 35 48 1.6E-16 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 PhaeoP54_01422 bead297207f05d6a2d85ddd3e96e7300 291 SUPERFAMILY SSF52374 4 285 3.84E-81 T 14-10-2018 PhaeoP54_02092 399271f5a336ae78ff9c699415c8e010 556 PIRSF PIRSF036654 5 556 4.3E-270 T 14-10-2018 IPR014614 Uncharacterised conserved protein UCP036654 GO:0016627|GO:0055114 PhaeoP54_02092 399271f5a336ae78ff9c699415c8e010 556 Gene3D G3DSA:3.90.700.10 282 491 1.6E-52 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 PhaeoP54_02092 399271f5a336ae78ff9c699415c8e010 556 Pfam PF00890 FAD binding domain 10 539 9.0E-106 T 14-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 PhaeoP54_02092 399271f5a336ae78ff9c699415c8e010 556 SUPERFAMILY SSF51905 4 551 1.67E-35 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PhaeoP54_02092 399271f5a336ae78ff9c699415c8e010 556 Gene3D G3DSA:3.50.50.60 9 552 1.6E-52 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PhaeoP54_03992 4ae075f47c7ea212aa3990d82b44abc0 280 Gene3D G3DSA:1.20.58.430 63 260 1.5E-15 T 14-10-2018 IPR023220 Type IV secretion system, VirB5-domain PhaeoP54_03992 4ae075f47c7ea212aa3990d82b44abc0 280 SUPERFAMILY SSF101082 41 259 8.37E-26 T 14-10-2018 PhaeoP54_03992 4ae075f47c7ea212aa3990d82b44abc0 280 Pfam PF07996 Type IV secretion system proteins 41 252 1.1E-15 T 14-10-2018 IPR014158 Type IV secretion system, VirB5 PhaeoP54_01335 8cc656fbf289e43b1af7702482268a39 158 Pfam PF04386 Stringent starvation protein B 10 135 2.7E-44 T 14-10-2018 IPR007481 Stringent starvation protein B PhaeoP54_01335 8cc656fbf289e43b1af7702482268a39 158 SUPERFAMILY SSF101738 3 115 1.55E-46 T 14-10-2018 IPR036760 SspB-like superfamily PhaeoP54_01335 8cc656fbf289e43b1af7702482268a39 158 Gene3D G3DSA:2.30.30.220 1 118 2.9E-43 T 14-10-2018 IPR036760 SspB-like superfamily PhaeoP54_00479 e8a32c1f9bee8bb5144a4081fa21f512 314 Pfam PF00535 Glycosyl transferase family 2 7 174 4.9E-19 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 PhaeoP54_00479 e8a32c1f9bee8bb5144a4081fa21f512 314 SUPERFAMILY SSF53448 6 219 2.25E-36 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PhaeoP54_00479 e8a32c1f9bee8bb5144a4081fa21f512 314 Gene3D G3DSA:3.90.550.10 2 238 6.7E-31 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PhaeoP54_00723 1c2b04ac8e56f287d52f2061b99bb024 630 SUPERFAMILY SSF51735 427 556 4.99E-32 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PhaeoP54_00723 1c2b04ac8e56f287d52f2061b99bb024 630 Pfam PF02254 TrkA-N domain 428 542 1.0E-22 T 14-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 PhaeoP54_00723 1c2b04ac8e56f287d52f2061b99bb024 630 Pfam PF00999 Sodium/hydrogen exchanger family 11 400 3.1E-58 T 14-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 PhaeoP54_00723 1c2b04ac8e56f287d52f2061b99bb024 630 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 12 310 4.5E-74 T 14-10-2018 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 PhaeoP54_00723 1c2b04ac8e56f287d52f2061b99bb024 630 Gene3D G3DSA:3.40.50.720 425 587 1.0E-36 T 14-10-2018 PhaeoP54_01876 c52fd66b58fb9a3c88cdc8cfcee9220c 617 SUPERFAMILY SSF52540 290 504 5.68E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_01876 c52fd66b58fb9a3c88cdc8cfcee9220c 617 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PhaeoP54_01876 c52fd66b58fb9a3c88cdc8cfcee9220c 617 Gene3D G3DSA:3.40.50.300 2 272 4.7E-57 T 14-10-2018 PhaeoP54_01876 c52fd66b58fb9a3c88cdc8cfcee9220c 617 Pfam PF00005 ABC transporter 18 175 1.3E-22 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PhaeoP54_01876 c52fd66b58fb9a3c88cdc8cfcee9220c 617 Pfam PF12848 ABC transporter 214 292 1.0E-26 T 14-10-2018 IPR032781 ABC-transporter extension domain PhaeoP54_01876 c52fd66b58fb9a3c88cdc8cfcee9220c 617 ProSitePatterns PS00211 ABC transporters family signature. 428 442 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PhaeoP54_01876 c52fd66b58fb9a3c88cdc8cfcee9220c 617 SMART SM00382 26 221 3.0E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_01876 c52fd66b58fb9a3c88cdc8cfcee9220c 617 SMART SM00382 334 500 5.1E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_01876 c52fd66b58fb9a3c88cdc8cfcee9220c 617 Gene3D G3DSA:3.40.50.300 273 536 7.1E-53 T 14-10-2018 PhaeoP54_01876 c52fd66b58fb9a3c88cdc8cfcee9220c 617 SUPERFAMILY SSF52540 2 237 1.45E-42 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_01876 c52fd66b58fb9a3c88cdc8cfcee9220c 617 Pfam PF00005 ABC transporter 325 456 2.6E-18 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PhaeoP54_02972 fdc2a8038bc005a1fe5717806da3513e 320 Gene3D G3DSA:3.30.460.20 3 131 5.3E-36 T 14-10-2018 PhaeoP54_02972 fdc2a8038bc005a1fe5717806da3513e 320 Gene3D G3DSA:1.20.58.340 133 249 1.2E-29 T 14-10-2018 PhaeoP54_02972 fdc2a8038bc005a1fe5717806da3513e 320 Gene3D G3DSA:1.20.58.340 250 320 5.1E-14 T 14-10-2018 PhaeoP54_02972 fdc2a8038bc005a1fe5717806da3513e 320 SUPERFAMILY SSF143865 31 247 1.03E-42 T 14-10-2018 PhaeoP54_02972 fdc2a8038bc005a1fe5717806da3513e 320 Pfam PF01544 CorA-like Mg2+ transporter protein 33 315 7.4E-53 T 14-10-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 PhaeoP54_02972 fdc2a8038bc005a1fe5717806da3513e 320 SUPERFAMILY SSF144083 257 316 9.42E-14 T 14-10-2018 PhaeoP54_01197 5e9f7d0b6ff27199ab2cc74c543ae575 525 Gene3D G3DSA:3.90.780.10 326 525 2.3E-68 T 14-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 PhaeoP54_01197 5e9f7d0b6ff27199ab2cc74c543ae575 525 Pfam PF02872 5'-nucleotidase, C-terminal domain 326 487 3.6E-43 T 14-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 PhaeoP54_01197 5e9f7d0b6ff27199ab2cc74c543ae575 525 ProSitePatterns PS00785 5'-nucleotidase signature 1. 25 37 - T 14-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 PhaeoP54_01197 5e9f7d0b6ff27199ab2cc74c543ae575 525 ProSitePatterns PS00786 5'-nucleotidase signature 2. 110 121 - T 14-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 PhaeoP54_01197 5e9f7d0b6ff27199ab2cc74c543ae575 525 SUPERFAMILY SSF55816 324 523 2.49E-63 T 14-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 PhaeoP54_01197 5e9f7d0b6ff27199ab2cc74c543ae575 525 SUPERFAMILY SSF56300 23 321 2.61E-92 T 14-10-2018 PhaeoP54_01197 5e9f7d0b6ff27199ab2cc74c543ae575 525 Gene3D G3DSA:3.60.21.10 23 325 2.9E-106 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like PhaeoP54_01197 5e9f7d0b6ff27199ab2cc74c543ae575 525 PRINTS PR01607 Apyrase family signature 461 480 4.6E-44 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 PhaeoP54_01197 5e9f7d0b6ff27199ab2cc74c543ae575 525 PRINTS PR01607 Apyrase family signature 226 249 4.6E-44 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 PhaeoP54_01197 5e9f7d0b6ff27199ab2cc74c543ae575 525 PRINTS PR01607 Apyrase family signature 263 283 4.6E-44 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 PhaeoP54_01197 5e9f7d0b6ff27199ab2cc74c543ae575 525 PRINTS PR01607 Apyrase family signature 207 224 4.6E-44 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 PhaeoP54_01197 5e9f7d0b6ff27199ab2cc74c543ae575 525 PRINTS PR01607 Apyrase family signature 383 406 4.6E-44 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 PhaeoP54_01197 5e9f7d0b6ff27199ab2cc74c543ae575 525 PRINTS PR01607 Apyrase family signature 23 41 4.6E-44 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 PhaeoP54_01197 5e9f7d0b6ff27199ab2cc74c543ae575 525 Pfam PF00149 Calcineurin-like phosphoesterase 25 242 1.6E-10 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 PhaeoP54_00943 a15f09d677b28cc4632fe45b27571e4d 563 SUPERFAMILY SSF81340 24 458 1.2E-96 T 14-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 PhaeoP54_00943 a15f09d677b28cc4632fe45b27571e4d 563 Gene3D G3DSA:1.10.3080.10 20 460 4.6E-89 T 14-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 PhaeoP54_00943 a15f09d677b28cc4632fe45b27571e4d 563 Pfam PF00654 Voltage gated chloride channel 93 440 4.8E-75 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 PhaeoP54_00943 a15f09d677b28cc4632fe45b27571e4d 563 PRINTS PR00762 Chloride channel signature 390 406 8.8E-23 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 PhaeoP54_00943 a15f09d677b28cc4632fe45b27571e4d 563 PRINTS PR00762 Chloride channel signature 408 427 8.8E-23 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 PhaeoP54_00943 a15f09d677b28cc4632fe45b27571e4d 563 PRINTS PR00762 Chloride channel signature 355 375 8.8E-23 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 PhaeoP54_00943 a15f09d677b28cc4632fe45b27571e4d 563 PRINTS PR00762 Chloride channel signature 187 206 8.8E-23 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 PhaeoP54_00943 a15f09d677b28cc4632fe45b27571e4d 563 PRINTS PR00762 Chloride channel signature 136 155 8.8E-23 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 PhaeoP54_02438 2f7f7a7393ff29fdc89eb40baf78ae67 361 SUPERFAMILY SSF53383 22 360 6.2E-98 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PhaeoP54_02438 2f7f7a7393ff29fdc89eb40baf78ae67 361 Gene3D G3DSA:3.40.640.10 21 265 3.5E-70 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PhaeoP54_02438 2f7f7a7393ff29fdc89eb40baf78ae67 361 PIRSF PIRSF017617 14 361 5.5E-108 T 14-10-2018 IPR023603 Threonine aldolase PhaeoP54_02438 2f7f7a7393ff29fdc89eb40baf78ae67 361 Gene3D G3DSA:3.90.1150.10 268 360 9.6E-16 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 PhaeoP54_02438 2f7f7a7393ff29fdc89eb40baf78ae67 361 Pfam PF01212 Beta-eliminating lyase 23 307 6.2E-73 T 14-10-2018 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 PhaeoP54_01071 df9d5863ed9f92185915762562f49004 363 Pfam PF03193 RsgA GTPase 96 270 8.6E-45 T 14-10-2018 IPR010914 RsgA GTPase domain GO:0003924|GO:0005525 PhaeoP54_01071 df9d5863ed9f92185915762562f49004 363 SUPERFAMILY SSF52540 113 330 3.04E-41 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_01071 df9d5863ed9f92185915762562f49004 363 Gene3D G3DSA:3.40.50.300 99 270 3.5E-39 T 14-10-2018 PhaeoP54_01071 df9d5863ed9f92185915762562f49004 363 Hamap MF_01820 Small ribosomal subunit biogenesis GTPase RsgA [rsgA]. 49 334 27.422 T 14-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 PhaeoP54_01071 df9d5863ed9f92185915762562f49004 363 Gene3D G3DSA:1.10.40.50 273 361 8.0E-18 T 14-10-2018 PhaeoP54_01071 df9d5863ed9f92185915762562f49004 363 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 95 327 4.0E-39 T 14-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 PhaeoP54_03790 2fd27d15b5e297564d2a37702601a50d 363 Gene3D G3DSA:2.40.50.100 290 353 3.5E-13 T 14-10-2018 PhaeoP54_03790 2fd27d15b5e297564d2a37702601a50d 363 TIGRFAM TIGR02142 modC_ABC: molybdate ABC transporter, ATP-binding protein 3 352 3.5E-119 T 14-10-2018 IPR011868 Molybdate ABC transporter, ATP-binding protein GO:0005524|GO:0015098|GO:0015689|GO:0016020 PhaeoP54_03790 2fd27d15b5e297564d2a37702601a50d 363 Pfam PF03459 TOBE domain 292 352 9.3E-12 T 14-10-2018 IPR005116 Transport-associated OB, type 1 PhaeoP54_03790 2fd27d15b5e297564d2a37702601a50d 363 Pfam PF00005 ABC transporter 23 159 1.3E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PhaeoP54_03790 2fd27d15b5e297564d2a37702601a50d 363 SUPERFAMILY SSF52540 6 224 1.02E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_03790 2fd27d15b5e297564d2a37702601a50d 363 SMART SM00382 22 209 2.4E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_03790 2fd27d15b5e297564d2a37702601a50d 363 SUPERFAMILY SSF50331 236 352 6.8E-18 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal PhaeoP54_03790 2fd27d15b5e297564d2a37702601a50d 363 ProSitePatterns PS00211 ABC transporters family signature. 132 146 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PhaeoP54_03790 2fd27d15b5e297564d2a37702601a50d 363 Gene3D G3DSA:3.40.50.300 3 228 2.5E-55 T 14-10-2018 PhaeoP54_02738 b43c8a0fd007a6c449b4ff298e22476e 790 TIGRFAM TIGR00178 monomer_idh: isocitrate dehydrogenase, NADP-dependent 58 789 0.0 T 14-10-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 PhaeoP54_02738 b43c8a0fd007a6c449b4ff298e22476e 790 Pfam PF03971 Monomeric isocitrate dehydrogenase 61 789 0.0 T 14-10-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 PhaeoP54_02738 b43c8a0fd007a6c449b4ff298e22476e 790 SUPERFAMILY SSF53659 58 790 0.0 T 14-10-2018 PhaeoP54_02738 b43c8a0fd007a6c449b4ff298e22476e 790 PIRSF PIRSF009407 53 790 0.0 T 14-10-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 PhaeoP54_00882 9b2e105fea1693552932375e6913e6eb 379 Pfam PF00155 Aminotransferase class I and II 31 358 4.7E-42 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 PhaeoP54_00882 9b2e105fea1693552932375e6913e6eb 379 Gene3D G3DSA:3.40.640.10 45 278 9.8E-106 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PhaeoP54_00882 9b2e105fea1693552932375e6913e6eb 379 SUPERFAMILY SSF53383 13 373 2.69E-84 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PhaeoP54_00882 9b2e105fea1693552932375e6913e6eb 379 Gene3D G3DSA:3.90.1150.10 31 367 9.8E-106 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 PhaeoP54_02649 c2c1272e9b16a960849a0d1c27fe1175 716 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 533 560 7.2E-40 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 PhaeoP54_02649 c2c1272e9b16a960849a0d1c27fe1175 716 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 610 639 7.2E-40 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 PhaeoP54_02649 c2c1272e9b16a960849a0d1c27fe1175 716 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 562 591 7.2E-40 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 PhaeoP54_02649 c2c1272e9b16a960849a0d1c27fe1175 716 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 456 485 7.2E-40 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 PhaeoP54_02649 c2c1272e9b16a960849a0d1c27fe1175 716 Gene3D G3DSA:1.20.1440.210 57 253 2.4E-7 T 14-10-2018 PhaeoP54_02649 c2c1272e9b16a960849a0d1c27fe1175 716 Pfam PF16591 Helical bimodular sensor domain 58 256 6.1E-8 T 14-10-2018 IPR032255 Helical bimodular sensor domain PhaeoP54_02649 c2c1272e9b16a960849a0d1c27fe1175 716 SMART SM00304 318 371 0.0025 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 PhaeoP54_02649 c2c1272e9b16a960849a0d1c27fe1175 716 SMART SM00304 382 434 0.038 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 PhaeoP54_02649 c2c1272e9b16a960849a0d1c27fe1175 716 Gene3D G3DSA:1.20.1480.50 286 376 2.5E-9 T 14-10-2018 PhaeoP54_02649 c2c1272e9b16a960849a0d1c27fe1175 716 Pfam PF00672 HAMP domain 318 363 3.4E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 PhaeoP54_02649 c2c1272e9b16a960849a0d1c27fe1175 716 SMART SM00283 435 682 4.5E-91 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 PhaeoP54_02649 c2c1272e9b16a960849a0d1c27fe1175 716 SUPERFAMILY SSF58104 403 683 1.7E-66 T 14-10-2018 PhaeoP54_02649 c2c1272e9b16a960849a0d1c27fe1175 716 SUPERFAMILY SSF158472 318 364 5.89E-7 T 14-10-2018 PhaeoP54_02649 c2c1272e9b16a960849a0d1c27fe1175 716 Gene3D G3DSA:1.10.287.950 383 684 1.6E-73 T 14-10-2018 PhaeoP54_02649 c2c1272e9b16a960849a0d1c27fe1175 716 Gene3D G3DSA:1.20.1440.210 133 245 2.4E-7 T 14-10-2018 PhaeoP54_02649 c2c1272e9b16a960849a0d1c27fe1175 716 SMART SM01358 37 289 3.3E-24 T 14-10-2018 IPR032255 Helical bimodular sensor domain PhaeoP54_02649 c2c1272e9b16a960849a0d1c27fe1175 716 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 495 650 2.2E-49 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 PhaeoP54_00273 e6cbae39ffdfd1a3c4d0141dca71b8ca 201 SMART SM01207 16 191 4.5E-87 T 14-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 PhaeoP54_00273 e6cbae39ffdfd1a3c4d0141dca71b8ca 201 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 11 201 5.5E-53 T 14-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 PhaeoP54_00273 e6cbae39ffdfd1a3c4d0141dca71b8ca 201 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 13 199 19.974 T 14-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 PhaeoP54_00273 e6cbae39ffdfd1a3c4d0141dca71b8ca 201 Pfam PF02660 Glycerol-3-phosphate acyltransferase 17 190 2.1E-51 T 14-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 PhaeoP54_03239 9bcc69e56575e658cad5d08a2b8f9764 479 Pfam PF00171 Aldehyde dehydrogenase family 13 473 1.1E-152 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 PhaeoP54_03239 9bcc69e56575e658cad5d08a2b8f9764 479 SUPERFAMILY SSF53720 3 473 6.02E-149 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 PhaeoP54_03239 9bcc69e56575e658cad5d08a2b8f9764 479 Gene3D G3DSA:3.40.309.10 252 442 1.9E-165 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 PhaeoP54_03239 9bcc69e56575e658cad5d08a2b8f9764 479 Gene3D G3DSA:3.40.605.10 25 469 1.9E-165 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 PhaeoP54_00457 dce54df05f2f5853baa5abfdd9c3bac6 94 Pfam PF00216 Bacterial DNA-binding protein 1 91 9.9E-31 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 PhaeoP54_00457 dce54df05f2f5853baa5abfdd9c3bac6 94 PRINTS PR01727 Prokaryotic integration host factor signature 41 56 4.4E-18 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 PhaeoP54_00457 dce54df05f2f5853baa5abfdd9c3bac6 94 PRINTS PR01727 Prokaryotic integration host factor signature 59 72 4.4E-18 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 PhaeoP54_00457 dce54df05f2f5853baa5abfdd9c3bac6 94 PRINTS PR01727 Prokaryotic integration host factor signature 75 89 4.4E-18 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 PhaeoP54_00457 dce54df05f2f5853baa5abfdd9c3bac6 94 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 47 66 - T 14-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 PhaeoP54_00457 dce54df05f2f5853baa5abfdd9c3bac6 94 Hamap MF_00381 Integration host factor subunit beta [ihfB]. 1 94 29.181 T 14-10-2018 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 PhaeoP54_00457 dce54df05f2f5853baa5abfdd9c3bac6 94 Gene3D G3DSA:4.10.520.10 1 93 1.8E-33 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 PhaeoP54_00457 dce54df05f2f5853baa5abfdd9c3bac6 94 SMART SM00411 1 91 4.9E-44 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 PhaeoP54_00457 dce54df05f2f5853baa5abfdd9c3bac6 94 SUPERFAMILY SSF47729 1 92 1.77E-30 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 PhaeoP54_00457 dce54df05f2f5853baa5abfdd9c3bac6 94 TIGRFAM TIGR00988 hip: integration host factor, beta subunit 1 92 1.0E-48 T 14-10-2018 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 PhaeoP54_01245 24afcb786a5d40c10895d22dcc248ef0 400 Pfam PF02653 Branched-chain amino acid transport system / permease component 45 323 2.3E-35 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 PhaeoP54_03840 a491181eda985c164384f3f6fe6ef169 124 SMART SM00422 1 65 5.1E-19 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PhaeoP54_03840 a491181eda985c164384f3f6fe6ef169 124 Pfam PF00376 MerR family regulatory protein 1 34 5.1E-10 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PhaeoP54_03840 a491181eda985c164384f3f6fe6ef169 124 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 32 52 4.9E-8 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PhaeoP54_03840 a491181eda985c164384f3f6fe6ef169 124 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 8 21 4.9E-8 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PhaeoP54_03840 a491181eda985c164384f3f6fe6ef169 124 Pfam PF09278 MerR, DNA binding 39 101 6.4E-19 T 14-10-2018 IPR015358 Transcription regulator MerR, DNA binding PhaeoP54_03840 a491181eda985c164384f3f6fe6ef169 124 Gene3D G3DSA:1.10.1660.10 1 120 3.4E-31 T 14-10-2018 PhaeoP54_03840 a491181eda985c164384f3f6fe6ef169 124 SUPERFAMILY SSF46955 1 121 8.55E-34 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily PhaeoP54_01265 f61fa7b165760fbfb5661d81f5a6eaef 484 SUPERFAMILY SSF51338 346 453 3.5E-37 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 PhaeoP54_01265 f61fa7b165760fbfb5661d81f5a6eaef 484 Gene3D G3DSA:2.30.40.10 4 453 1.9E-191 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 PhaeoP54_01265 f61fa7b165760fbfb5661d81f5a6eaef 484 SUPERFAMILY SSF51556 51 380 8.52E-110 T 14-10-2018 IPR032466 Metal-dependent hydrolase PhaeoP54_01265 f61fa7b165760fbfb5661d81f5a6eaef 484 Gene3D G3DSA:3.20.20.140 51 421 1.9E-191 T 14-10-2018 PhaeoP54_01265 f61fa7b165760fbfb5661d81f5a6eaef 484 TIGRFAM TIGR02033 D-hydantoinase: dihydropyrimidinase 4 452 1.1E-181 T 14-10-2018 IPR011778 Hydantoinase/dihydropyrimidinase GO:0005737 Reactome: R-HSA-399956 PhaeoP54_01265 f61fa7b165760fbfb5661d81f5a6eaef 484 Pfam PF01979 Amidohydrolase family 47 420 4.4E-26 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 PhaeoP54_01265 f61fa7b165760fbfb5661d81f5a6eaef 484 SUPERFAMILY SSF51338 2 63 7.62E-17 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 PhaeoP54_00083 caec82168144c9817d76e0f2788cc0ef 686 Gene3D G3DSA:3.40.50.880 321 510 2.0E-28 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like PhaeoP54_00083 caec82168144c9817d76e0f2788cc0ef 686 SUPERFAMILY SSF52317 263 512 4.58E-52 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like PhaeoP54_03422 2f2c1c28d4712b09f97813dbf505b7ed 207 Gene3D G3DSA:3.90.79.10 36 206 6.6E-47 T 14-10-2018 PhaeoP54_03422 2f2c1c28d4712b09f97813dbf505b7ed 207 Pfam PF00293 NUDIX domain 46 160 7.5E-12 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 PhaeoP54_03422 2f2c1c28d4712b09f97813dbf505b7ed 207 SUPERFAMILY SSF55811 39 198 2.3E-35 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 PhaeoP54_01913 3f4d2cf2a8bdbcd55211570e365cef99 367 Gene3D G3DSA:3.40.50.720 5 202 2.0E-48 T 14-10-2018 PhaeoP54_01913 3f4d2cf2a8bdbcd55211570e365cef99 367 Gene3D G3DSA:3.90.25.10 203 366 2.1E-54 T 14-10-2018 PhaeoP54_01913 3f4d2cf2a8bdbcd55211570e365cef99 367 Pfam PF16363 GDP-mannose 4,6 dehydratase 17 335 3.8E-34 T 14-10-2018 IPR016040 NAD(P)-binding domain PhaeoP54_01913 3f4d2cf2a8bdbcd55211570e365cef99 367 SUPERFAMILY SSF51735 9 343 6.32E-61 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PhaeoP54_01913 3f4d2cf2a8bdbcd55211570e365cef99 367 TIGRFAM TIGR02622 CDP_4_6_dhtase: CDP-glucose 4,6-dehydratase 9 361 8.9E-134 T 14-10-2018 IPR013445 CDP-glucose 4,6-dehydratase KEGG: 00520+4.2.1.45|MetaCyc: PWY-5833 PhaeoP54_02706 548eafb7f1ab617198255d35c5d4ddcc 214 SUPERFAMILY SSF52540 24 197 2.27E-27 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_02706 548eafb7f1ab617198255d35c5d4ddcc 214 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 29 166 3.5E-7 T 14-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 PhaeoP54_02706 548eafb7f1ab617198255d35c5d4ddcc 214 Gene3D G3DSA:3.40.50.300 7 211 1.3E-53 T 14-10-2018 PhaeoP54_04073 2df6cdc7b05c5a52fa61b592629e0626 1465 SUPERFAMILY SSF47336 1115 1186 9.03E-16 T 14-10-2018 IPR036736 ACP-like superfamily PhaeoP54_04073 2df6cdc7b05c5a52fa61b592629e0626 1465 Pfam PF00550 Phosphopantetheine attachment site 1122 1186 1.3E-11 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain PhaeoP54_04073 2df6cdc7b05c5a52fa61b592629e0626 1465 Gene3D G3DSA:3.40.50.1820 1208 1464 4.3E-44 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold PhaeoP54_04073 2df6cdc7b05c5a52fa61b592629e0626 1465 SUPERFAMILY SSF52777 234 509 6.67E-38 T 14-10-2018 PhaeoP54_04073 2df6cdc7b05c5a52fa61b592629e0626 1465 SUPERFAMILY SSF52777 51 219 3.67E-28 T 14-10-2018 PhaeoP54_04073 2df6cdc7b05c5a52fa61b592629e0626 1465 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 574 1015 2.3E-113 T 14-10-2018 IPR010071 Amino acid adenylation domain PhaeoP54_04073 2df6cdc7b05c5a52fa61b592629e0626 1465 Pfam PF00668 Condensation domain 47 523 4.3E-44 T 14-10-2018 IPR001242 Condensation domain PhaeoP54_04073 2df6cdc7b05c5a52fa61b592629e0626 1465 Gene3D G3DSA:3.30.300.30 985 1101 3.9E-19 T 14-10-2018 PhaeoP54_04073 2df6cdc7b05c5a52fa61b592629e0626 1465 Pfam PF00975 Thioesterase domain 1219 1457 4.3E-15 T 14-10-2018 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 PhaeoP54_04073 2df6cdc7b05c5a52fa61b592629e0626 1465 Gene3D G3DSA:3.30.559.10 44 225 1.8E-30 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 PhaeoP54_04073 2df6cdc7b05c5a52fa61b592629e0626 1465 Gene3D G3DSA:3.30.559.30 235 526 6.9E-48 T 14-10-2018 PhaeoP54_04073 2df6cdc7b05c5a52fa61b592629e0626 1465 Gene3D G3DSA:3.40.50.12780 545 983 1.1E-118 T 14-10-2018 PhaeoP54_04073 2df6cdc7b05c5a52fa61b592629e0626 1465 SUPERFAMILY SSF56801 503 1097 1.16E-125 T 14-10-2018 PhaeoP54_04073 2df6cdc7b05c5a52fa61b592629e0626 1465 SMART SM00823 Phosphopantetheine attachment site 1121 1190 1.1E-4 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 PhaeoP54_04073 2df6cdc7b05c5a52fa61b592629e0626 1465 SUPERFAMILY SSF53474 1204 1459 4.44E-39 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold PhaeoP54_04073 2df6cdc7b05c5a52fa61b592629e0626 1465 Gene3D G3DSA:1.10.1200.10 1108 1192 7.1E-20 T 14-10-2018 IPR036736 ACP-like superfamily PhaeoP54_04073 2df6cdc7b05c5a52fa61b592629e0626 1465 ProSitePatterns PS00455 Putative AMP-binding domain signature. 715 726 - T 14-10-2018 IPR020845 AMP-binding, conserved site PhaeoP54_04073 2df6cdc7b05c5a52fa61b592629e0626 1465 Pfam PF00501 AMP-binding enzyme 552 991 4.4E-89 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 PhaeoP54_02908 0e5c4d6e007e56d13a097e72a9ff8622 246 SMART SM00419 179 228 6.8E-18 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 PhaeoP54_02908 0e5c4d6e007e56d13a097e72a9ff8622 246 ProSitePatterns PS00042 Crp-type HTH domain signature. 187 210 - T 14-10-2018 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 PhaeoP54_02908 0e5c4d6e007e56d13a097e72a9ff8622 246 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 201 216 7.5E-11 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 PhaeoP54_02908 0e5c4d6e007e56d13a097e72a9ff8622 246 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 185 201 7.5E-11 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 PhaeoP54_02908 0e5c4d6e007e56d13a097e72a9ff8622 246 Gene3D G3DSA:2.60.120.10 36 152 1.9E-27 T 14-10-2018 IPR014710 RmlC-like jelly roll fold PhaeoP54_02908 0e5c4d6e007e56d13a097e72a9ff8622 246 SUPERFAMILY SSF46785 153 236 8.49E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_02908 0e5c4d6e007e56d13a097e72a9ff8622 246 Pfam PF13545 Crp-like helix-turn-helix domain 156 233 3.2E-17 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 PhaeoP54_02908 0e5c4d6e007e56d13a097e72a9ff8622 246 Gene3D G3DSA:1.10.10.10 153 239 2.2E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_02908 0e5c4d6e007e56d13a097e72a9ff8622 246 SUPERFAMILY SSF51206 14 151 4.32E-26 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like PhaeoP54_02908 0e5c4d6e007e56d13a097e72a9ff8622 246 Pfam PF00027 Cyclic nucleotide-binding domain 40 123 1.5E-10 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain PhaeoP54_02908 0e5c4d6e007e56d13a097e72a9ff8622 246 SMART SM00100 21 139 8.9E-17 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain PhaeoP54_00604 cc93bd5f129a2b8077a63d8141792c53 196 Gene3D G3DSA:3.40.630.30 6 187 1.1E-45 T 14-10-2018 PhaeoP54_00604 cc93bd5f129a2b8077a63d8141792c53 196 Pfam PF13302 Acetyltransferase (GNAT) domain 14 159 4.7E-23 T 14-10-2018 IPR000182 GNAT domain PhaeoP54_00604 cc93bd5f129a2b8077a63d8141792c53 196 SUPERFAMILY SSF55729 8 183 2.21E-44 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase PhaeoP54_00785 03cfd10ccf5f126dbbc15c04003efc66 359 Gene3D G3DSA:3.30.1220.10 250 359 3.8E-18 T 14-10-2018 IPR036627 CobW-like, C-terminal domain superfamily PhaeoP54_00785 03cfd10ccf5f126dbbc15c04003efc66 359 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 269 358 3.9E-15 T 14-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal PhaeoP54_00785 03cfd10ccf5f126dbbc15c04003efc66 359 SUPERFAMILY SSF90002 268 357 1.7E-16 T 14-10-2018 PhaeoP54_00785 03cfd10ccf5f126dbbc15c04003efc66 359 SMART SM00833 268 357 2.1E-5 T 14-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal PhaeoP54_00785 03cfd10ccf5f126dbbc15c04003efc66 359 Gene3D G3DSA:3.40.50.300 4 230 1.2E-59 T 14-10-2018 PhaeoP54_00785 03cfd10ccf5f126dbbc15c04003efc66 359 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 8 201 2.0E-55 T 14-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain PhaeoP54_00785 03cfd10ccf5f126dbbc15c04003efc66 359 SUPERFAMILY SSF52540 5 250 8.46E-33 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_00785 03cfd10ccf5f126dbbc15c04003efc66 359 TIGRFAM TIGR02475 CobW: cobalamin biosynthesis protein CobW 5 254 7.5E-124 T 14-10-2018 IPR012824 Cobalamin (vitamin B12) biosynthesis CobW GO:0009236 PhaeoP54_03623 7dc108ca27e8c2e0419fbc910da94766 332 SUPERFAMILY SSF52540 9 257 1.85E-69 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_03623 7dc108ca27e8c2e0419fbc910da94766 332 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 236 321 1.2E-24 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 PhaeoP54_03623 7dc108ca27e8c2e0419fbc910da94766 332 Gene3D G3DSA:3.40.50.300 7 327 1.3E-99 T 14-10-2018 PhaeoP54_03623 7dc108ca27e8c2e0419fbc910da94766 332 ProSitePatterns PS00211 ABC transporters family signature. 159 173 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PhaeoP54_03623 7dc108ca27e8c2e0419fbc910da94766 332 Pfam PF00005 ABC transporter 30 186 2.6E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PhaeoP54_03623 7dc108ca27e8c2e0419fbc910da94766 332 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 238 302 4.6E-18 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 PhaeoP54_03623 7dc108ca27e8c2e0419fbc910da94766 332 SMART SM00382 38 244 4.8E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_01867 d39252d3908b00f3159602984473f892 474 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 10 437 3.2E-160 T 14-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 PhaeoP54_01867 d39252d3908b00f3159602984473f892 474 PIRSF PIRSF006446 3 461 5.2E-196 T 14-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 PhaeoP54_01233 732d49e33db4f0e410073943dcae8413 422 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 3 413 53.334 T 14-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 PhaeoP54_01233 732d49e33db4f0e410073943dcae8413 422 SMART SM00994 12 51 1.7E-24 T 14-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 PhaeoP54_01233 732d49e33db4f0e410073943dcae8413 422 SMART SM01086 315 409 1.4E-31 T 14-10-2018 IPR019489 Clp ATPase, C-terminal PhaeoP54_01233 732d49e33db4f0e410073943dcae8413 422 SUPERFAMILY SSF57716 13 48 1.18E-11 T 14-10-2018 PhaeoP54_01233 732d49e33db4f0e410073943dcae8413 422 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 10 410 5.9E-201 T 14-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 PhaeoP54_01233 732d49e33db4f0e410073943dcae8413 422 Gene3D G3DSA:3.30.50.30 3 52 2.2E-24 T 14-10-2018 IPR038366 Zinc finger, ClpX C4-type superfamily PhaeoP54_01233 732d49e33db4f0e410073943dcae8413 422 Pfam PF06689 ClpX C4-type zinc finger 13 50 6.0E-20 T 14-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 PhaeoP54_01233 732d49e33db4f0e410073943dcae8413 422 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 315 388 5.3E-17 T 14-10-2018 IPR019489 Clp ATPase, C-terminal PhaeoP54_01233 732d49e33db4f0e410073943dcae8413 422 Gene3D G3DSA:1.10.8.60 314 422 2.2E-41 T 14-10-2018 PhaeoP54_01233 732d49e33db4f0e410073943dcae8413 422 SMART SM00382 111 264 4.3E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_01233 732d49e33db4f0e410073943dcae8413 422 Gene3D G3DSA:3.40.50.300 57 313 2.2E-106 T 14-10-2018 PhaeoP54_01233 732d49e33db4f0e410073943dcae8413 422 SUPERFAMILY SSF52540 62 395 7.89E-72 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_01233 732d49e33db4f0e410073943dcae8413 422 Pfam PF07724 AAA domain (Cdc48 subfamily) 112 308 5.9E-50 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 PhaeoP54_03660 2fafdcc6742aded96a7b8fc82b26dba1 120 Pfam PF01740 STAS domain 7 106 2.5E-9 T 14-10-2018 IPR002645 STAS domain PhaeoP54_03660 2fafdcc6742aded96a7b8fc82b26dba1 120 Gene3D G3DSA:3.30.750.24 2 119 3.9E-26 T 14-10-2018 IPR036513 STAS domain superfamily PhaeoP54_03660 2fafdcc6742aded96a7b8fc82b26dba1 120 SUPERFAMILY SSF52091 7 112 6.08E-14 T 14-10-2018 IPR036513 STAS domain superfamily PhaeoP54_01985 fbe56b629e07926ef1a8824ad1a77e59 554 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 409 551 3.5E-9 T 14-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 PhaeoP54_01985 fbe56b629e07926ef1a8824ad1a77e59 554 SUPERFAMILY SSF55124 251 418 1.52E-25 T 14-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 PhaeoP54_01985 fbe56b629e07926ef1a8824ad1a77e59 554 SUPERFAMILY SSF56014 405 550 8.51E-36 T 14-10-2018 PhaeoP54_01985 fbe56b629e07926ef1a8824ad1a77e59 554 Gene3D G3DSA:3.30.413.10 405 554 3.8E-28 T 14-10-2018 PhaeoP54_01985 fbe56b629e07926ef1a8824ad1a77e59 554 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 119 272 7.6E-36 T 14-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 PhaeoP54_01985 fbe56b629e07926ef1a8824ad1a77e59 554 SUPERFAMILY SSF55124 1 126 2.94E-28 T 14-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 PhaeoP54_01985 fbe56b629e07926ef1a8824ad1a77e59 554 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 52 110 3.3E-16 T 14-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 PhaeoP54_01985 fbe56b629e07926ef1a8824ad1a77e59 554 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 327 395 5.9E-16 T 14-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 PhaeoP54_01985 fbe56b629e07926ef1a8824ad1a77e59 554 SUPERFAMILY SSF56014 120 273 7.98E-46 T 14-10-2018 PhaeoP54_02864 de2aaa1aed78cb3b1f60bd14d9cfb824 444 Gene3D G3DSA:1.10.1060.10 2 110 5.8E-10 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 PhaeoP54_02864 de2aaa1aed78cb3b1f60bd14d9cfb824 444 Pfam PF02754 Cysteine-rich domain 185 271 5.0E-13 T 14-10-2018 IPR004017 Cysteine-rich domain PhaeoP54_02864 de2aaa1aed78cb3b1f60bd14d9cfb824 444 Pfam PF02754 Cysteine-rich domain 316 399 4.4E-12 T 14-10-2018 IPR004017 Cysteine-rich domain PhaeoP54_02864 de2aaa1aed78cb3b1f60bd14d9cfb824 444 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 76 87 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PhaeoP54_02864 de2aaa1aed78cb3b1f60bd14d9cfb824 444 PIRSF PIRSF000139 5 424 2.3E-133 T 14-10-2018 PhaeoP54_02864 de2aaa1aed78cb3b1f60bd14d9cfb824 444 SUPERFAMILY SSF54862 21 118 5.02E-20 T 14-10-2018 PhaeoP54_02864 de2aaa1aed78cb3b1f60bd14d9cfb824 444 Pfam PF12838 4Fe-4S dicluster domain 24 90 1.4E-11 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PhaeoP54_00178 399f07365d4b85c3a4a1f442aac94d59 355 TIGRFAM TIGR01933 hflK: HflK protein 68 347 2.4E-79 T 14-10-2018 IPR010201 HflK GO:0016021 PhaeoP54_00178 399f07365d4b85c3a4a1f442aac94d59 355 SUPERFAMILY SSF117892 137 252 1.44E-21 T 14-10-2018 IPR036013 Band 7/SPFH domain superfamily PhaeoP54_00178 399f07365d4b85c3a4a1f442aac94d59 355 Pfam PF12221 Bacterial membrane protein N terminal 5 42 1.7E-4 T 14-10-2018 IPR020980 Menbrane protein HflK, N-terminal PhaeoP54_00178 399f07365d4b85c3a4a1f442aac94d59 355 Pfam PF01145 SPFH domain / Band 7 family 69 261 2.5E-27 T 14-10-2018 IPR001107 Band 7 domain PhaeoP54_00178 399f07365d4b85c3a4a1f442aac94d59 355 Gene3D G3DSA:3.30.479.30 134 235 2.4E-18 T 14-10-2018 PhaeoP54_00178 399f07365d4b85c3a4a1f442aac94d59 355 SMART SM00244 65 245 8.7E-24 T 14-10-2018 IPR001107 Band 7 domain PhaeoP54_01012 66a35aa40def2fe8872411c1ce332bb2 75 ProDom PD062377 3'REGION NQO2 URF1 12 71 3.0E-15 T 14-10-2018 IPR020308 Uncharacterised protein family, Ynq1 PhaeoP54_01012 66a35aa40def2fe8872411c1ce332bb2 75 Pfam PF17272 Family of unknown function (DUF5337) 1 74 4.1E-34 T 14-10-2018 IPR020308 Uncharacterised protein family, Ynq1 PhaeoP54_01092 0d2a95e4aa952a986ab308efc73195b1 334 SUPERFAMILY SSF51445 6 284 6.0E-68 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily PhaeoP54_01092 0d2a95e4aa952a986ab308efc73195b1 334 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 234 251 - T 14-10-2018 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 PhaeoP54_01092 0d2a95e4aa952a986ab308efc73195b1 334 Gene3D G3DSA:3.20.20.300 4 324 8.5E-89 T 14-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 PhaeoP54_01092 0d2a95e4aa952a986ab308efc73195b1 334 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 23 295 9.4E-48 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 PhaeoP54_03329 314372c61d1ae10f6e94a6ca02e21522 281 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 12 273 32.876 T 14-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 PhaeoP54_03329 314372c61d1ae10f6e94a6ca02e21522 281 SUPERFAMILY SSF54506 143 271 1.23E-42 T 14-10-2018 PhaeoP54_03329 314372c61d1ae10f6e94a6ca02e21522 281 Pfam PF01678 Diaminopimelate epimerase 14 128 4.8E-23 T 14-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 PhaeoP54_03329 314372c61d1ae10f6e94a6ca02e21522 281 Pfam PF01678 Diaminopimelate epimerase 153 263 2.3E-22 T 14-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 PhaeoP54_03329 314372c61d1ae10f6e94a6ca02e21522 281 SUPERFAMILY SSF54506 12 136 1.37E-39 T 14-10-2018 PhaeoP54_03329 314372c61d1ae10f6e94a6ca02e21522 281 Gene3D G3DSA:3.10.310.10 121 260 2.1E-80 T 14-10-2018 PhaeoP54_03329 314372c61d1ae10f6e94a6ca02e21522 281 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 72 86 - T 14-10-2018 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 PhaeoP54_03329 314372c61d1ae10f6e94a6ca02e21522 281 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 14 271 2.4E-71 T 14-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 PhaeoP54_03329 314372c61d1ae10f6e94a6ca02e21522 281 Gene3D G3DSA:3.10.310.10 14 269 2.1E-80 T 14-10-2018 PhaeoP54_00964 9630fe989a4dd26c31ec3024217608fd 154 Pfam PF01799 [2Fe-2S] binding domain 72 144 1.6E-28 T 14-10-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 PhaeoP54_00964 9630fe989a4dd26c31ec3024217608fd 154 SUPERFAMILY SSF47741 83 152 6.15E-30 T 14-10-2018 IPR036884 [2Fe-2S]-binding domain superfamily PhaeoP54_00964 9630fe989a4dd26c31ec3024217608fd 154 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 39 47 - T 14-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 PhaeoP54_00964 9630fe989a4dd26c31ec3024217608fd 154 SUPERFAMILY SSF54292 2 86 2.36E-25 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 PhaeoP54_00964 9630fe989a4dd26c31ec3024217608fd 154 Gene3D G3DSA:3.10.20.30 1 71 1.1E-25 T 14-10-2018 IPR012675 Beta-grasp domain superfamily PhaeoP54_00964 9630fe989a4dd26c31ec3024217608fd 154 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 6 60 2.2E-8 T 14-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 PhaeoP54_00964 9630fe989a4dd26c31ec3024217608fd 154 Gene3D G3DSA:1.10.150.120 72 154 9.9E-28 T 14-10-2018 PhaeoP54_00279 5328a690c49699e2644cd32542b31ce4 180 TIGRFAM TIGR02667 moaB_proteo: molybdenum cofactor biosynthesis protein B 9 171 4.5E-72 T 14-10-2018 IPR013484 Molybdenum cofactor biosynthesis protein B, proteobacteria GO:0006777 PhaeoP54_00279 5328a690c49699e2644cd32542b31ce4 180 SMART SM00852 16 160 2.6E-32 T 14-10-2018 IPR001453 MoaB/Mog domain PhaeoP54_00279 5328a690c49699e2644cd32542b31ce4 180 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 13 152 1.9E-34 T 14-10-2018 IPR001453 MoaB/Mog domain PhaeoP54_00279 5328a690c49699e2644cd32542b31ce4 180 SUPERFAMILY SSF53218 8 171 1.23E-45 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily PhaeoP54_00279 5328a690c49699e2644cd32542b31ce4 180 Pfam PF00994 Probable molybdopterin binding domain 16 157 1.3E-34 T 14-10-2018 IPR001453 MoaB/Mog domain PhaeoP54_00279 5328a690c49699e2644cd32542b31ce4 180 PIRSF PIRSF006443 1 168 4.2E-59 T 14-10-2018 IPR012245 Molybdenum cofactor biosynthesis protein MoaB GO:0006777 PhaeoP54_00279 5328a690c49699e2644cd32542b31ce4 180 Gene3D G3DSA:3.40.980.10 4 173 1.6E-49 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily PhaeoP54_02681 05de1482993e6a21ca60cf9796af0521 350 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 49 345 8.2E-97 T 14-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 PhaeoP54_02681 05de1482993e6a21ca60cf9796af0521 350 Gene3D G3DSA:3.40.50.10800 132 342 4.2E-112 T 14-10-2018 PhaeoP54_02681 05de1482993e6a21ca60cf9796af0521 350 Gene3D G3DSA:3.40.50.10800 52 325 4.2E-112 T 14-10-2018 PhaeoP54_02681 05de1482993e6a21ca60cf9796af0521 350 Gene3D G3DSA:3.40.50.10800 216 300 4.2E-112 T 14-10-2018 PhaeoP54_02681 05de1482993e6a21ca60cf9796af0521 350 Hamap MF_00568 Quinolinate synthase A [nadA]. 47 344 43.476 T 14-10-2018 IPR023066 Quinolinate synthase A, type 2 GO:0016765 MetaCyc: PWY-5316|MetaCyc: PWY-7342 PhaeoP54_02681 05de1482993e6a21ca60cf9796af0521 350 Pfam PF02445 Quinolinate synthetase A protein 52 342 9.0E-114 T 14-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 PhaeoP54_02681 05de1482993e6a21ca60cf9796af0521 350 SUPERFAMILY SSF142754 49 344 2.09E-109 T 14-10-2018 IPR036094 Quinolinate synthetase A superfamily GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 PhaeoP54_04071 53774b518c18d2d95369be730a67489c 224 SUPERFAMILY SSF161098 14 213 7.59E-44 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_04071 53774b518c18d2d95369be730a67489c 224 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 14 113 1.1E-21 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 PhaeoP54_04071 53774b518c18d2d95369be730a67489c 224 Gene3D G3DSA:1.10.3720.10 3 222 5.2E-50 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_04071 53774b518c18d2d95369be730a67489c 224 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 35 215 5.6E-19 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PhaeoP54_01117 29538b879096c89a31ab50e91d01c427 458 Pfam PF00270 DEAD/DEAH box helicase 42 212 1.3E-48 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 PhaeoP54_01117 29538b879096c89a31ab50e91d01c427 458 Pfam PF00271 Helicase conserved C-terminal domain 247 356 3.0E-29 T 14-10-2018 IPR001650 Helicase, C-terminal PhaeoP54_01117 29538b879096c89a31ab50e91d01c427 458 SMART SM00487 37 239 4.2E-58 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain PhaeoP54_01117 29538b879096c89a31ab50e91d01c427 458 Gene3D G3DSA:3.40.50.300 7 227 1.2E-78 T 14-10-2018 PhaeoP54_01117 29538b879096c89a31ab50e91d01c427 458 Gene3D G3DSA:3.40.50.300 231 391 5.6E-49 T 14-10-2018 PhaeoP54_01117 29538b879096c89a31ab50e91d01c427 458 SUPERFAMILY SSF52540 92 377 1.01E-74 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_01117 29538b879096c89a31ab50e91d01c427 458 SMART SM00490 275 356 4.7E-34 T 14-10-2018 IPR001650 Helicase, C-terminal PhaeoP54_01269 8b0d69ebc7e5494d86cd7a60e2999981 328 Pfam PF09084 NMT1/THI5 like 34 253 1.1E-35 T 14-10-2018 IPR015168 SsuA/THI5-like PhaeoP54_01269 8b0d69ebc7e5494d86cd7a60e2999981 328 Gene3D G3DSA:3.40.190.10 105 212 2.3E-57 T 14-10-2018 PhaeoP54_01269 8b0d69ebc7e5494d86cd7a60e2999981 328 SUPERFAMILY SSF53850 26 301 4.18E-27 T 14-10-2018 PhaeoP54_01269 8b0d69ebc7e5494d86cd7a60e2999981 328 Gene3D G3DSA:3.40.190.10 26 300 2.3E-57 T 14-10-2018 PhaeoP54_03217 5afde9d6465f0aae33a51064822bfa0c 329 SUPERFAMILY SSF51569 57 312 1.67E-73 T 14-10-2018 PhaeoP54_03217 5afde9d6465f0aae33a51064822bfa0c 329 PIRSF PIRSF001357 58 319 2.6E-71 T 14-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 PhaeoP54_03217 5afde9d6465f0aae33a51064822bfa0c 329 Pfam PF01791 DeoC/LacD family aldolase 65 274 7.4E-22 T 14-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 PhaeoP54_03217 5afde9d6465f0aae33a51064822bfa0c 329 SMART SM01133 64 310 1.1E-72 T 14-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 PhaeoP54_03217 5afde9d6465f0aae33a51064822bfa0c 329 Gene3D G3DSA:3.20.20.70 54 314 3.9E-87 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PhaeoP54_03217 5afde9d6465f0aae33a51064822bfa0c 329 TIGRFAM TIGR00126 deoC: deoxyribose-phosphate aldolase 66 289 6.4E-45 T 14-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 PhaeoP54_03327 2f33629dfc6702ff25e081948d9fa95b 229 Gene3D G3DSA:3.90.850.10 1 228 9.0E-75 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 PhaeoP54_03327 2f33629dfc6702ff25e081948d9fa95b 229 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 27 225 4.3E-51 T 14-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 PhaeoP54_03327 2f33629dfc6702ff25e081948d9fa95b 229 SUPERFAMILY SSF56529 23 226 2.49E-63 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 PhaeoP54_02022 ac3469a466c5863bd94bebfd24d52b2f 236 Gene3D G3DSA:1.20.120.530 83 221 2.1E-20 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal PhaeoP54_02022 ac3469a466c5863bd94bebfd24d52b2f 236 SMART SM00895 90 214 1.8E-13 T 14-10-2018 IPR011711 GntR, C-terminal PhaeoP54_02022 ac3469a466c5863bd94bebfd24d52b2f 236 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 54 70 8.5E-6 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PhaeoP54_02022 ac3469a466c5863bd94bebfd24d52b2f 236 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 40 54 8.5E-6 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PhaeoP54_02022 ac3469a466c5863bd94bebfd24d52b2f 236 Pfam PF07729 FCD domain 90 213 1.7E-19 T 14-10-2018 IPR011711 GntR, C-terminal PhaeoP54_02022 ac3469a466c5863bd94bebfd24d52b2f 236 Pfam PF00392 Bacterial regulatory proteins, gntR family 22 80 2.5E-17 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PhaeoP54_02022 ac3469a466c5863bd94bebfd24d52b2f 236 SUPERFAMILY SSF46785 15 84 5.3E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_02022 ac3469a466c5863bd94bebfd24d52b2f 236 SUPERFAMILY SSF48008 86 220 2.46E-20 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal PhaeoP54_02022 ac3469a466c5863bd94bebfd24d52b2f 236 SMART SM00345 22 80 3.9E-15 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PhaeoP54_02022 ac3469a466c5863bd94bebfd24d52b2f 236 Gene3D G3DSA:1.10.10.10 5 82 1.9E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_01773 5fefda6cc4736d9df22e773de0325a09 135 Pfam PF11367 Protein of unknown function (DUF3168) 13 123 4.3E-23 T 14-10-2018 IPR021508 Tail completion protein PhaeoP54_01773 5fefda6cc4736d9df22e773de0325a09 135 Gene3D G3DSA:3.30.2000.30 2 132 4.3E-11 T 14-10-2018 PhaeoP54_02393 5dccda9156c96e61de0c023e469d691d 137 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 4 130 1.0E-21 T 14-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 PhaeoP54_02393 5dccda9156c96e61de0c023e469d691d 137 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 3 137 16.71 T 14-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 PhaeoP54_02393 5dccda9156c96e61de0c023e469d691d 137 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 5 83 1.1E-21 T 14-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 PhaeoP54_02393 5dccda9156c96e61de0c023e469d691d 137 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 10 88 2.0E-30 T 14-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 PhaeoP54_02393 5dccda9156c96e61de0c023e469d691d 137 SUPERFAMILY SSF51344 3 84 6.28E-20 T 14-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 PhaeoP54_02393 5dccda9156c96e61de0c023e469d691d 137 Gene3D G3DSA:2.60.15.10 1 131 2.9E-28 T 14-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 PhaeoP54_01457 8f69ff79822cda802a48730eef7e9981 181 Pfam PF00156 Phosphoribosyl transferase domain 15 162 9.2E-27 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 PhaeoP54_01457 8f69ff79822cda802a48730eef7e9981 181 TIGRFAM TIGR01203 HGPRTase: hypoxanthine phosphoribosyltransferase 10 175 5.6E-65 T 14-10-2018 IPR005904 Hypoxanthine phosphoribosyl transferase GO:0004422|GO:0005737|GO:0006166 KEGG: 00230+2.4.2.8|KEGG: 00983+2.4.2.8|MetaCyc: PWY-6599|MetaCyc: PWY-6609|MetaCyc: PWY-6610|MetaCyc: PWY-6620 PhaeoP54_01457 8f69ff79822cda802a48730eef7e9981 181 Gene3D G3DSA:3.40.50.2020 2 179 1.4E-61 T 14-10-2018 PhaeoP54_01457 8f69ff79822cda802a48730eef7e9981 181 SUPERFAMILY SSF53271 5 178 1.84E-52 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like PhaeoP54_03764 3f96ab245ca23042aa01bc4abf9c57a6 988 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 324 348 7.1E-9 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PhaeoP54_03764 3f96ab245ca23042aa01bc4abf9c57a6 988 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 174 196 7.1E-9 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PhaeoP54_03764 3f96ab245ca23042aa01bc4abf9c57a6 988 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 285 293 7.1E-9 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PhaeoP54_03764 3f96ab245ca23042aa01bc4abf9c57a6 988 SUPERFAMILY SSF103025 595 878 6.44E-81 T 14-10-2018 PhaeoP54_03764 3f96ab245ca23042aa01bc4abf9c57a6 988 Pfam PF12831 FAD dependent oxidoreductase 174 215 4.6E-8 T 14-10-2018 IPR039649 Digeranylgeranylglycerophospholipid reductase, N-terminal PhaeoP54_03764 3f96ab245ca23042aa01bc4abf9c57a6 988 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 175 194 1.4E-8 T 14-10-2018 PhaeoP54_03764 3f96ab245ca23042aa01bc4abf9c57a6 988 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 284 302 1.4E-8 T 14-10-2018 PhaeoP54_03764 3f96ab245ca23042aa01bc4abf9c57a6 988 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 402 418 1.4E-8 T 14-10-2018 PhaeoP54_03764 3f96ab245ca23042aa01bc4abf9c57a6 988 Gene3D G3DSA:3.50.50.60 296 410 1.8E-103 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PhaeoP54_03764 3f96ab245ca23042aa01bc4abf9c57a6 988 Gene3D G3DSA:1.10.10.1100 493 569 1.8E-103 T 14-10-2018 PhaeoP54_03764 3f96ab245ca23042aa01bc4abf9c57a6 988 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 884 972 6.4E-9 T 14-10-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 PhaeoP54_03764 3f96ab245ca23042aa01bc4abf9c57a6 988 Pfam PF01571 Aminomethyltransferase folate-binding domain 602 869 2.1E-67 T 14-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain PhaeoP54_03764 3f96ab245ca23042aa01bc4abf9c57a6 988 Gene3D G3DSA:3.30.70.1400 655 878 5.3E-77 T 14-10-2018 PhaeoP54_03764 3f96ab245ca23042aa01bc4abf9c57a6 988 Gene3D G3DSA:2.40.30.110 912 985 6.9E-6 T 14-10-2018 PhaeoP54_03764 3f96ab245ca23042aa01bc4abf9c57a6 988 Gene3D G3DSA:3.10.20.440 15 107 3.4E-8 T 14-10-2018 PhaeoP54_03764 3f96ab245ca23042aa01bc4abf9c57a6 988 SUPERFAMILY SSF51905 163 457 4.21E-26 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PhaeoP54_03764 3f96ab245ca23042aa01bc4abf9c57a6 988 Gene3D G3DSA:3.30.1360.120 596 858 5.3E-77 T 14-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 PhaeoP54_03764 3f96ab245ca23042aa01bc4abf9c57a6 988 SUPERFAMILY SSF101790 896 988 4.25E-13 T 14-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal PhaeoP54_03764 3f96ab245ca23042aa01bc4abf9c57a6 988 Gene3D G3DSA:3.50.50.60 174 576 1.8E-103 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PhaeoP54_03764 3f96ab245ca23042aa01bc4abf9c57a6 988 TIGRFAM TIGR01372 soxA: sarcosine oxidase, alpha subunit family 12 987 0.0 T 14-10-2018 IPR006277 Sarcosine oxidase, alpha subunit GO:0008115|GO:0046653 KEGG: 00260+1.5.3.1|MetaCyc: PWY-3661|MetaCyc: PWY-4722 PhaeoP54_03764 3f96ab245ca23042aa01bc4abf9c57a6 988 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 20 104 4.2E-27 T 14-10-2018 PhaeoP54_03764 3f96ab245ca23042aa01bc4abf9c57a6 988 PIRSF PIRSF037980 4 988 0.0 T 14-10-2018 IPR006277 Sarcosine oxidase, alpha subunit GO:0008115|GO:0046653 KEGG: 00260+1.5.3.1|MetaCyc: PWY-3661|MetaCyc: PWY-4722 PhaeoP54_01454 c2402ff49e64ca698263f6bf8207407d 380 Pfam PF01546 Peptidase family M20/M25/M40 69 376 2.0E-22 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 PhaeoP54_01454 c2402ff49e64ca698263f6bf8207407d 380 Gene3D G3DSA:3.30.70.360 177 292 1.7E-89 T 14-10-2018 PhaeoP54_01454 c2402ff49e64ca698263f6bf8207407d 380 SUPERFAMILY SSF53187 4 379 1.33E-65 T 14-10-2018 PhaeoP54_01454 c2402ff49e64ca698263f6bf8207407d 380 SUPERFAMILY SSF55031 179 289 1.64E-15 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain PhaeoP54_01454 c2402ff49e64ca698263f6bf8207407d 380 PIRSF PIRSF005962 1 380 1.1E-94 T 14-10-2018 IPR017439 Amidohydrolase GO:0016787 PhaeoP54_01454 c2402ff49e64ca698263f6bf8207407d 380 Pfam PF07687 Peptidase dimerisation domain 181 274 1.2E-5 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain PhaeoP54_01454 c2402ff49e64ca698263f6bf8207407d 380 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 9 367 2.2E-59 T 14-10-2018 IPR017439 Amidohydrolase GO:0016787 PhaeoP54_01454 c2402ff49e64ca698263f6bf8207407d 380 Gene3D G3DSA:3.40.630.10 10 364 1.7E-89 T 14-10-2018 PhaeoP54_02847 f2756f2e032408e90279c9be1577b91c 525 Pfam PF02485 Core-2/I-Branching enzyme 4 245 1.8E-21 T 14-10-2018 IPR003406 Glycosyl transferase, family 14 GO:0008375|GO:0016020 PhaeoP54_01588 7e38304069ba210ee3fb7dddbcb73032 353 SUPERFAMILY SSF51717 21 269 6.93E-73 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 PhaeoP54_01588 7e38304069ba210ee3fb7dddbcb73032 353 Pfam PF00809 Pterin binding enzyme 25 254 1.2E-29 T 14-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 PhaeoP54_01588 7e38304069ba210ee3fb7dddbcb73032 353 Gene3D G3DSA:3.20.20.20 8 290 6.9E-83 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 PhaeoP54_01551 bd538ee05cc28d3c4cecdcbf3d70fc23 358 Gene3D G3DSA:3.30.200.20 20 121 3.2E-35 T 14-10-2018 PhaeoP54_01551 bd538ee05cc28d3c4cecdcbf3d70fc23 358 SUPERFAMILY SSF56112 22 341 8.17E-54 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily PhaeoP54_01551 bd538ee05cc28d3c4cecdcbf3d70fc23 358 Pfam PF01636 Phosphotransferase enzyme family 43 266 7.2E-48 T 14-10-2018 IPR002575 Aminoglycoside phosphotransferase PhaeoP54_01551 bd538ee05cc28d3c4cecdcbf3d70fc23 358 Gene3D G3DSA:3.90.1200.10 122 355 1.4E-75 T 14-10-2018 PhaeoP54_00973 99e2e661a61391b40357ce1bb2a6fb86 523 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 139 2.7E-45 T 14-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal PhaeoP54_00973 99e2e661a61391b40357ce1bb2a6fb86 523 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 143 373 1.5E-68 T 14-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain PhaeoP54_00973 99e2e661a61391b40357ce1bb2a6fb86 523 Gene3D G3DSA:3.40.50.720 3 368 2.9E-141 T 14-10-2018 PhaeoP54_00973 99e2e661a61391b40357ce1bb2a6fb86 523 SMART SM01003 4 139 1.6E-65 T 14-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal PhaeoP54_00973 99e2e661a61391b40357ce1bb2a6fb86 523 SMART SM01002 148 316 3.9E-75 T 14-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain PhaeoP54_00973 99e2e661a61391b40357ce1bb2a6fb86 523 Pfam PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch 440 522 8.4E-31 T 14-10-2018 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 PhaeoP54_00973 99e2e661a61391b40357ce1bb2a6fb86 523 TIGRFAM TIGR00561 pntA: NAD(P)(+) transhydrogenase (AB-specific), alpha subunit 2 522 1.4E-201 T 14-10-2018 IPR026255 NAD(P) transhydrogenase, alpha subunit GO:0008746|GO:0055114|GO:1902600 KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 PhaeoP54_00973 99e2e661a61391b40357ce1bb2a6fb86 523 Gene3D G3DSA:3.40.50.720 139 323 2.9E-141 T 14-10-2018 PhaeoP54_00973 99e2e661a61391b40357ce1bb2a6fb86 523 PIRSF PIRSF000203 1 522 1.2E-221 T 14-10-2018 IPR026255 NAD(P) transhydrogenase, alpha subunit GO:0008746|GO:0055114|GO:1902600 KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 PhaeoP54_00973 99e2e661a61391b40357ce1bb2a6fb86 523 SUPERFAMILY SSF52283 2 170 6.12E-51 T 14-10-2018 PhaeoP54_00973 99e2e661a61391b40357ce1bb2a6fb86 523 SUPERFAMILY SSF51735 139 322 1.35E-35 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PhaeoP54_02652 cb97312b58b794c2f6420e9bb18b7341 211 Gene3D G3DSA:2.60.120.10 103 193 2.0E-26 T 14-10-2018 IPR014710 RmlC-like jelly roll fold PhaeoP54_02652 cb97312b58b794c2f6420e9bb18b7341 211 Gene3D G3DSA:1.10.10.1320 2 102 5.8E-23 T 14-10-2018 PhaeoP54_02652 cb97312b58b794c2f6420e9bb18b7341 211 TIGRFAM TIGR02451 anti_sig_ChrR: anti-sigma factor, putative, ChrR family 6 211 2.3E-63 T 14-10-2018 IPR012807 Anti-sigma factor ChrR, putative PhaeoP54_02652 cb97312b58b794c2f6420e9bb18b7341 211 Pfam PF12973 ChrR Cupin-like domain 107 188 7.4E-15 T 14-10-2018 IPR025979 ChrR-like cupin domain PhaeoP54_02652 cb97312b58b794c2f6420e9bb18b7341 211 SUPERFAMILY SSF51182 104 207 5.77E-19 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily PhaeoP54_00151 af8e9313ca51097f1385e8c44147449a 152 SMART SM00226 6 147 2.1E-10 T 14-10-2018 IPR023485 Phosphotyrosine protein phosphatase I PhaeoP54_00151 af8e9313ca51097f1385e8c44147449a 152 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 8 142 9.0E-13 T 14-10-2018 IPR023485 Phosphotyrosine protein phosphatase I PhaeoP54_00151 af8e9313ca51097f1385e8c44147449a 152 Gene3D G3DSA:3.40.50.2300 5 146 4.3E-28 T 14-10-2018 PhaeoP54_00151 af8e9313ca51097f1385e8c44147449a 152 SUPERFAMILY SSF52788 6 144 4.71E-30 T 14-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily PhaeoP54_00922 035b25db0b477402baaf2cdd6296db77 494 Pfam PF08245 Mur ligase middle domain 114 315 3.0E-46 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 PhaeoP54_00922 035b25db0b477402baaf2cdd6296db77 494 SUPERFAMILY SSF53623 107 334 1.44E-69 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 PhaeoP54_00922 035b25db0b477402baaf2cdd6296db77 494 SUPERFAMILY SSF63418 16 105 1.57E-20 T 14-10-2018 IPR035911 MurE/MurF, N-terminal PhaeoP54_00922 035b25db0b477402baaf2cdd6296db77 494 SUPERFAMILY SSF53244 336 483 3.14E-41 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 PhaeoP54_00922 035b25db0b477402baaf2cdd6296db77 494 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 23 485 3.2E-129 T 14-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 PhaeoP54_00922 035b25db0b477402baaf2cdd6296db77 494 Pfam PF02875 Mur ligase family, glutamate ligase domain 336 420 9.6E-20 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 PhaeoP54_00922 035b25db0b477402baaf2cdd6296db77 494 Gene3D G3DSA:3.40.1390.10 4 106 3.7E-26 T 14-10-2018 PhaeoP54_00922 035b25db0b477402baaf2cdd6296db77 494 Pfam PF01225 Mur ligase family, catalytic domain 24 102 9.2E-11 T 14-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 PhaeoP54_00922 035b25db0b477402baaf2cdd6296db77 494 Gene3D G3DSA:3.40.1190.10 107 340 4.1E-65 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 PhaeoP54_00922 035b25db0b477402baaf2cdd6296db77 494 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 7 486 29.215 T 14-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 PhaeoP54_00922 035b25db0b477402baaf2cdd6296db77 494 Gene3D G3DSA:3.90.190.20 341 490 4.2E-47 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 PhaeoP54_00589 463db30e2441a72e970ed82e4f1336f7 309 SUPERFAMILY SSF53955 168 289 1.13E-38 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily PhaeoP54_00589 463db30e2441a72e970ed82e4f1336f7 309 Pfam PF01464 Transglycosylase SLT domain 177 267 1.4E-23 T 14-10-2018 IPR008258 Transglycosylase SLT domain 1 PhaeoP54_00589 463db30e2441a72e970ed82e4f1336f7 309 Gene3D G3DSA:1.10.530.10 168 301 5.1E-35 T 14-10-2018 PhaeoP54_00589 463db30e2441a72e970ed82e4f1336f7 309 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 187 215 - T 14-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 PhaeoP54_03013 0f52d86e283827c78af86f535d736660 62 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 5 59 1.6E-25 T 14-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PhaeoP54_03013 0f52d86e283827c78af86f535d736660 62 Pfam PF00327 Ribosomal protein L30p/L7e 6 55 3.4E-16 T 14-10-2018 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain PhaeoP54_03013 0f52d86e283827c78af86f535d736660 62 PIRSF PIRSF002211 1 61 3.6E-24 T 14-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PhaeoP54_03013 0f52d86e283827c78af86f535d736660 62 SUPERFAMILY SSF55129 3 58 6.93E-20 T 14-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily PhaeoP54_03013 0f52d86e283827c78af86f535d736660 62 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 2 59 18.112 T 14-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PhaeoP54_03013 0f52d86e283827c78af86f535d736660 62 Gene3D G3DSA:3.30.1390.20 1 59 7.6E-25 T 14-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily PhaeoP54_02135 707f5777a086532efb33716a880b854a 230 SUPERFAMILY SSF143081 26 225 6.28E-50 T 14-10-2018 IPR036590 SOS response associated peptidase-like PhaeoP54_02135 707f5777a086532efb33716a880b854a 230 Gene3D G3DSA:3.90.1680.10 1 226 6.4E-48 T 14-10-2018 IPR036590 SOS response associated peptidase-like PhaeoP54_02135 707f5777a086532efb33716a880b854a 230 Pfam PF02586 SOS response associated peptidase (SRAP) 30 210 8.3E-42 T 14-10-2018 IPR003738 SOS response associated peptidase (SRAP) PhaeoP54_03695 5d0f1bb3407c9c06ae11f6144f22dea3 161 Pfam PF06191 Protein of unknown function (DUF995) 11 135 3.8E-23 T 14-10-2018 IPR009337 Protein of unknown function DUF995 PhaeoP54_00746 05f13dc5c5772acaf5ebac47d2113354 457 Gene3D G3DSA:3.90.1150.10 11 452 4.2E-148 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 PhaeoP54_00746 05f13dc5c5772acaf5ebac47d2113354 457 Gene3D G3DSA:3.40.640.10 67 346 4.2E-148 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PhaeoP54_00746 05f13dc5c5772acaf5ebac47d2113354 457 SUPERFAMILY SSF53383 16 452 3.85E-109 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PhaeoP54_00746 05f13dc5c5772acaf5ebac47d2113354 457 PIRSF PIRSF000521 35 410 1.7E-32 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PhaeoP54_00746 05f13dc5c5772acaf5ebac47d2113354 457 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 256 293 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PhaeoP54_00746 05f13dc5c5772acaf5ebac47d2113354 457 Pfam PF00202 Aminotransferase class-III 33 451 4.4E-80 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PhaeoP54_01691 255bad3ce0bc8d9f4b7599f802230b52 316 Pfam PF01553 Acyltransferase 94 225 2.9E-8 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 PhaeoP54_01691 255bad3ce0bc8d9f4b7599f802230b52 316 SUPERFAMILY SSF69593 74 291 2.09E-16 T 14-10-2018 PhaeoP54_01691 255bad3ce0bc8d9f4b7599f802230b52 316 SMART SM00563 103 230 0.0034 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 PhaeoP54_02882 f602a971daaeee60ee0b4ead1ba5f4d5 362 Pfam PF13393 Histidyl-tRNA synthetase 10 349 1.4E-31 T 14-10-2018 PhaeoP54_02882 f602a971daaeee60ee0b4ead1ba5f4d5 362 PIRSF PIRSF001549 190 360 1.3E-11 T 14-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 PhaeoP54_02882 f602a971daaeee60ee0b4ead1ba5f4d5 362 PIRSF PIRSF001549 8 172 1.0E-16 T 14-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 PhaeoP54_02882 f602a971daaeee60ee0b4ead1ba5f4d5 362 Gene3D G3DSA:3.30.930.10 8 358 3.2E-42 T 14-10-2018 PhaeoP54_02882 f602a971daaeee60ee0b4ead1ba5f4d5 362 SUPERFAMILY SSF55681 14 352 1.72E-36 T 14-10-2018 PhaeoP54_02872 d8c5d89cf8898a4fb5b10a5be81196d8 467 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 3 466 5.5E-240 T 14-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 PhaeoP54_02872 d8c5d89cf8898a4fb5b10a5be81196d8 467 SUPERFAMILY SSF53732 2 466 3.53E-167 T 14-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 PhaeoP54_02872 d8c5d89cf8898a4fb5b10a5be81196d8 467 Gene3D G3DSA:3.30.499.10 328 467 4.3E-50 T 14-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 PhaeoP54_02872 d8c5d89cf8898a4fb5b10a5be81196d8 467 PRINTS PR00415 Aconitase family signature 121 134 1.7E-49 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 PhaeoP54_02872 d8c5d89cf8898a4fb5b10a5be81196d8 467 PRINTS PR00415 Aconitase family signature 197 210 1.7E-49 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 PhaeoP54_02872 d8c5d89cf8898a4fb5b10a5be81196d8 467 PRINTS PR00415 Aconitase family signature 135 150 1.7E-49 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 PhaeoP54_02872 d8c5d89cf8898a4fb5b10a5be81196d8 467 PRINTS PR00415 Aconitase family signature 344 355 1.7E-49 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 PhaeoP54_02872 d8c5d89cf8898a4fb5b10a5be81196d8 467 PRINTS PR00415 Aconitase family signature 288 302 1.7E-49 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 PhaeoP54_02872 d8c5d89cf8898a4fb5b10a5be81196d8 467 PRINTS PR00415 Aconitase family signature 400 413 1.7E-49 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 PhaeoP54_02872 d8c5d89cf8898a4fb5b10a5be81196d8 467 PRINTS PR00415 Aconitase family signature 110 118 1.7E-49 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 PhaeoP54_02872 d8c5d89cf8898a4fb5b10a5be81196d8 467 PRINTS PR00415 Aconitase family signature 211 224 1.7E-49 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 PhaeoP54_02872 d8c5d89cf8898a4fb5b10a5be81196d8 467 PRINTS PR00415 Aconitase family signature 84 97 1.7E-49 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 PhaeoP54_02872 d8c5d89cf8898a4fb5b10a5be81196d8 467 ProSitePatterns PS01244 Aconitase family signature 2. 400 413 - T 14-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 PhaeoP54_02872 d8c5d89cf8898a4fb5b10a5be81196d8 467 Pfam PF00330 Aconitase family (aconitate hydratase) 8 458 6.9E-159 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 PhaeoP54_02872 d8c5d89cf8898a4fb5b10a5be81196d8 467 Gene3D G3DSA:3.30.499.20 5 288 4.2E-103 T 14-10-2018 PhaeoP54_02872 d8c5d89cf8898a4fb5b10a5be81196d8 467 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 2 467 60.034 T 14-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 PhaeoP54_02872 d8c5d89cf8898a4fb5b10a5be81196d8 467 ProSitePatterns PS00450 Aconitase family signature 1. 340 356 - T 14-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 PhaeoP54_01740 7d1ae3e6cee202700edc95c7f4beabb4 443 Gene3D G3DSA:2.70.70.10 282 441 1.5E-48 T 14-10-2018 IPR011055 Duplicated hybrid motif PhaeoP54_01740 7d1ae3e6cee202700edc95c7f4beabb4 443 SUPERFAMILY SSF51261 306 436 3.03E-55 T 14-10-2018 IPR011055 Duplicated hybrid motif PhaeoP54_01740 7d1ae3e6cee202700edc95c7f4beabb4 443 Pfam PF01551 Peptidase family M23 338 432 4.9E-33 T 14-10-2018 IPR016047 Peptidase M23 PhaeoP54_03688 ad257fbf65994d6e1564dfa1d90553e1 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 61 4.4E-18 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PhaeoP54_03688 ad257fbf65994d6e1564dfa1d90553e1 307 SUPERFAMILY SSF46785 2 84 4.25E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_03688 ad257fbf65994d6e1564dfa1d90553e1 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.0E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PhaeoP54_03688 ad257fbf65994d6e1564dfa1d90553e1 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.0E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PhaeoP54_03688 ad257fbf65994d6e1564dfa1d90553e1 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.0E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PhaeoP54_03688 ad257fbf65994d6e1564dfa1d90553e1 307 Gene3D G3DSA:1.10.10.10 1 92 3.2E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_03688 ad257fbf65994d6e1564dfa1d90553e1 307 SUPERFAMILY SSF53850 92 293 1.65E-13 T 14-10-2018 PhaeoP54_03688 ad257fbf65994d6e1564dfa1d90553e1 307 Pfam PF03466 LysR substrate binding domain 91 297 2.7E-9 T 14-10-2018 IPR005119 LysR, substrate-binding PhaeoP54_03026 e31804637174ad53624e4edac2759843 206 Pfam PF13759 Putative 2OG-Fe(II) oxygenase 103 202 2.3E-30 T 14-10-2018 IPR012668 Conserved hypothetical protein CHP02466 PhaeoP54_03026 e31804637174ad53624e4edac2759843 206 TIGRFAM TIGR02466 TIGR02466: conserved hypothetical protein 6 205 3.1E-82 T 14-10-2018 IPR012668 Conserved hypothetical protein CHP02466 PhaeoP54_03026 e31804637174ad53624e4edac2759843 206 Gene3D G3DSA:2.60.120.620 12 206 4.0E-69 T 14-10-2018 PhaeoP54_00636 6f1702eb9a34e44044d9742681aaaad2 217 SMART SM00345 12 70 1.8E-14 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PhaeoP54_00636 6f1702eb9a34e44044d9742681aaaad2 217 Gene3D G3DSA:1.20.120.530 68 208 1.1E-26 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal PhaeoP54_00636 6f1702eb9a34e44044d9742681aaaad2 217 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 66 2.0E-17 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PhaeoP54_00636 6f1702eb9a34e44044d9742681aaaad2 217 SUPERFAMILY SSF48008 76 202 6.02E-25 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal PhaeoP54_00636 6f1702eb9a34e44044d9742681aaaad2 217 SMART SM00895 79 201 9.3E-22 T 14-10-2018 IPR011711 GntR, C-terminal PhaeoP54_00636 6f1702eb9a34e44044d9742681aaaad2 217 SUPERFAMILY SSF46785 9 95 6.0E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_00636 6f1702eb9a34e44044d9742681aaaad2 217 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 30 44 2.7E-6 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PhaeoP54_00636 6f1702eb9a34e44044d9742681aaaad2 217 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 44 60 2.7E-6 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PhaeoP54_00636 6f1702eb9a34e44044d9742681aaaad2 217 Gene3D G3DSA:1.10.10.10 5 67 9.3E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_00636 6f1702eb9a34e44044d9742681aaaad2 217 Pfam PF07729 FCD domain 79 199 8.2E-26 T 14-10-2018 IPR011711 GntR, C-terminal PhaeoP54_02394 56e990a022beb178508d87929350e29e 474 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 131 351 4.3E-61 T 14-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 PhaeoP54_02394 56e990a022beb178508d87929350e29e 474 Gene3D G3DSA:1.10.1140.10 354 474 1.5E-58 T 14-10-2018 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 PhaeoP54_02394 56e990a022beb178508d87929350e29e 474 Gene3D G3DSA:3.40.50.300 77 353 8.5E-120 T 14-10-2018 PhaeoP54_02394 56e990a022beb178508d87929350e29e 474 SUPERFAMILY SSF47917 354 470 1.75E-52 T 14-10-2018 PhaeoP54_02394 56e990a022beb178508d87929350e29e 474 Hamap MF_01347 ATP synthase subunit beta [atpB]. 3 469 56.772 T 14-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 PhaeoP54_02394 56e990a022beb178508d87929350e29e 474 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 342 351 - T 14-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 PhaeoP54_02394 56e990a022beb178508d87929350e29e 474 SUPERFAMILY SSF50615 4 76 5.23E-25 T 14-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 PhaeoP54_02394 56e990a022beb178508d87929350e29e 474 Gene3D G3DSA:2.40.10.170 1 76 1.8E-34 T 14-10-2018 PhaeoP54_02394 56e990a022beb178508d87929350e29e 474 PIRSF PIRSF039072 1 474 7.7E-279 T 14-10-2018 PhaeoP54_02394 56e990a022beb178508d87929350e29e 474 SUPERFAMILY SSF52540 78 356 6.68E-89 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_02394 56e990a022beb178508d87929350e29e 474 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 5 469 1.8E-252 T 14-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 PhaeoP54_02394 56e990a022beb178508d87929350e29e 474 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 8 73 8.3E-22 T 14-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 PhaeoP54_02394 56e990a022beb178508d87929350e29e 474 SMART SM00382 143 328 2.0E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_02833 2d76e15ad084c9acb5e9ee3c5e015da4 161 Pfam PF00583 Acetyltransferase (GNAT) family 31 141 3.0E-8 T 14-10-2018 IPR000182 GNAT domain PhaeoP54_02833 2d76e15ad084c9acb5e9ee3c5e015da4 161 SUPERFAMILY SSF55729 9 146 4.61E-18 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase PhaeoP54_02833 2d76e15ad084c9acb5e9ee3c5e015da4 161 Gene3D G3DSA:3.40.630.30 3 154 9.5E-20 T 14-10-2018 PhaeoP54_00631 c33eae5f10d5d58353b42b449a4d6058 152 Gene3D G3DSA:3.30.70.920 58 139 1.2E-19 T 14-10-2018 PhaeoP54_00631 c33eae5f10d5d58353b42b449a4d6058 152 Pfam PF01037 Lrp/AsnC ligand binding domain 72 143 1.3E-17 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain PhaeoP54_00631 c33eae5f10d5d58353b42b449a4d6058 152 Gene3D G3DSA:1.10.10.10 1 57 1.3E-15 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_00631 c33eae5f10d5d58353b42b449a4d6058 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 31 50 9.7E-9 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 PhaeoP54_00631 c33eae5f10d5d58353b42b449a4d6058 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 4 20 9.7E-9 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 PhaeoP54_00631 c33eae5f10d5d58353b42b449a4d6058 152 ProSitePatterns PS00519 AsnC-type HTH domain signature. 22 48 - T 14-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site PhaeoP54_00631 c33eae5f10d5d58353b42b449a4d6058 152 SUPERFAMILY SSF46785 3 94 2.2E-13 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_00631 c33eae5f10d5d58353b42b449a4d6058 152 SUPERFAMILY SSF54909 64 145 2.55E-15 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel PhaeoP54_00631 c33eae5f10d5d58353b42b449a4d6058 152 Pfam PF13404 AsnC-type helix-turn-helix domain 4 45 1.5E-12 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 PhaeoP54_00631 c33eae5f10d5d58353b42b449a4d6058 152 SMART SM00344 4 113 3.4E-26 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 PhaeoP54_00130 71eeff359063af4105e8eb5010f34e32 121 PRINTS PR00598 Bacterial regulatory protein MarR family signature 47 62 1.1E-8 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PhaeoP54_00130 71eeff359063af4105e8eb5010f34e32 121 PRINTS PR00598 Bacterial regulatory protein MarR family signature 66 82 1.1E-8 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PhaeoP54_00130 71eeff359063af4105e8eb5010f34e32 121 PRINTS PR00598 Bacterial regulatory protein MarR family signature 30 46 1.1E-8 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PhaeoP54_00130 71eeff359063af4105e8eb5010f34e32 121 ProSitePatterns PS01117 MarR-type HTH domain signature. 45 79 - T 14-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site PhaeoP54_00130 71eeff359063af4105e8eb5010f34e32 121 Gene3D G3DSA:1.10.10.10 2 120 1.4E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_00130 71eeff359063af4105e8eb5010f34e32 121 SUPERFAMILY SSF46785 4 118 1.29E-27 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_00130 71eeff359063af4105e8eb5010f34e32 121 Pfam PF01047 MarR family 13 69 3.1E-15 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PhaeoP54_00130 71eeff359063af4105e8eb5010f34e32 121 SMART SM00347 6 118 5.7E-18 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PhaeoP54_02076 cfdfe0a1dea9c2bf725ae1320f3d6cc3 462 Pfam PF01381 Helix-turn-helix 12 66 6.1E-12 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PhaeoP54_02076 cfdfe0a1dea9c2bf725ae1320f3d6cc3 462 Gene3D G3DSA:1.10.260.40 7 84 3.7E-14 T 14-10-2018 PhaeoP54_02076 cfdfe0a1dea9c2bf725ae1320f3d6cc3 462 Pfam PF09856 Predicted transcriptional regulator (DUF2083) 303 459 2.9E-69 T 14-10-2018 IPR018653 Domain of unknown function DUF2083,transcriptional regulator PhaeoP54_02076 cfdfe0a1dea9c2bf725ae1320f3d6cc3 462 PIRSF PIRSF019251 1 462 6.1E-193 T 14-10-2018 IPR026281 HTH-type transcriptional regulator RamB GO:0006355 PhaeoP54_02076 cfdfe0a1dea9c2bf725ae1320f3d6cc3 462 SUPERFAMILY SSF47413 7 71 8.04E-14 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 PhaeoP54_02076 cfdfe0a1dea9c2bf725ae1320f3d6cc3 462 Pfam PF06114 IrrE N-terminal-like domain 195 302 4.0E-16 T 14-10-2018 IPR010359 IrrE N-terminal-like domain PhaeoP54_02076 cfdfe0a1dea9c2bf725ae1320f3d6cc3 462 SMART SM00530 11 66 4.1E-14 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PhaeoP54_01930 aa621abb7860e86bf481f18b5ead2c17 477 SUPERFAMILY SSF55874 338 459 3.56E-15 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PhaeoP54_01930 aa621abb7860e86bf481f18b5ead2c17 477 SMART SM00387 365 461 4.7E-14 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PhaeoP54_01930 aa621abb7860e86bf481f18b5ead2c17 477 Pfam PF07730 Histidine kinase 259 327 4.9E-13 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 PhaeoP54_01930 aa621abb7860e86bf481f18b5ead2c17 477 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 368 460 2.2E-6 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PhaeoP54_01930 aa621abb7860e86bf481f18b5ead2c17 477 PIRSF PIRSF037314 6 474 5.4E-199 T 14-10-2018 IPR017171 Signal transduction histidine kinase, MctS PhaeoP54_01930 aa621abb7860e86bf481f18b5ead2c17 477 Gene3D G3DSA:3.30.565.10 336 459 2.9E-28 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PhaeoP54_01930 aa621abb7860e86bf481f18b5ead2c17 477 SMART SM01049 51 142 7.8E-26 T 14-10-2018 IPR033480 Single Cache domain 2 PhaeoP54_01930 aa621abb7860e86bf481f18b5ead2c17 477 Gene3D G3DSA:3.30.450.20 37 212 3.3E-37 T 14-10-2018 PhaeoP54_01930 aa621abb7860e86bf481f18b5ead2c17 477 Pfam PF17200 Single Cache domain 2 55 198 4.1E-30 T 14-10-2018 IPR033480 Single Cache domain 2 PhaeoP54_01930 aa621abb7860e86bf481f18b5ead2c17 477 PRINTS PR00344 Bacterial sensor protein C-terminal signature 419 437 3.2E-5 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PhaeoP54_01930 aa621abb7860e86bf481f18b5ead2c17 477 PRINTS PR00344 Bacterial sensor protein C-terminal signature 401 415 3.2E-5 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PhaeoP54_01930 aa621abb7860e86bf481f18b5ead2c17 477 PRINTS PR00344 Bacterial sensor protein C-terminal signature 445 458 3.2E-5 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PhaeoP54_00204 9170086ac34b672f3cd604990d4f500d 296 Gene3D G3DSA:3.30.70.100 180 275 1.1E-17 T 14-10-2018 PhaeoP54_00204 9170086ac34b672f3cd604990d4f500d 296 SUPERFAMILY SSF82689 181 281 1.44E-22 T 14-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 PhaeoP54_00204 9170086ac34b672f3cd604990d4f500d 296 SUPERFAMILY SSF50182 113 176 5.56E-15 T 14-10-2018 IPR010920 LSM domain superfamily PhaeoP54_00204 9170086ac34b672f3cd604990d4f500d 296 Pfam PF00924 Mechanosensitive ion channel 72 271 4.6E-41 T 14-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 PhaeoP54_00204 9170086ac34b672f3cd604990d4f500d 296 SUPERFAMILY SSF82861 28 112 4.05E-5 T 14-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 PhaeoP54_00204 9170086ac34b672f3cd604990d4f500d 296 Gene3D G3DSA:2.30.30.60 129 177 5.8E-14 T 14-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily PhaeoP54_01137 4f826f71440526f2705340ada336b659 261 Gene3D G3DSA:3.40.190.10 89 192 1.1E-13 T 14-10-2018 PhaeoP54_01137 4f826f71440526f2705340ada336b659 261 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 89 230 2.2E-15 T 14-10-2018 PhaeoP54_01137 4f826f71440526f2705340ada336b659 261 SUPERFAMILY SSF53850 74 231 8.89E-10 T 14-10-2018 PhaeoP54_01137 4f826f71440526f2705340ada336b659 261 Gene3D G3DSA:3.40.190.10 193 221 1.1E-13 T 14-10-2018 PhaeoP54_01662 f3d9f272f214a11c312f80a269b92a01 180 Pfam PF02643 Uncharacterized ACR, COG1430 64 167 1.5E-29 T 14-10-2018 IPR003795 Protein of unknown function DUF192 PhaeoP54_01662 f3d9f272f214a11c312f80a269b92a01 180 Gene3D G3DSA:2.60.120.1140 32 168 4.9E-41 T 14-10-2018 IPR038695 Saro_0823-like superfamily PhaeoP54_00322 1d9c37d888f1ec8b432fbad60e2bb4a9 293 TIGRFAM TIGR02098 MJ0042_CXXC: MJ0042 family finger-like domain 1 36 3.9E-13 T 14-10-2018 IPR011723 Zinc finger/thioredoxin putative PhaeoP54_00322 1d9c37d888f1ec8b432fbad60e2bb4a9 293 Pfam PF13717 zinc-ribbon domain 1 36 1.7E-15 T 14-10-2018 IPR011723 Zinc finger/thioredoxin putative PhaeoP54_00687 627e36021ef005bf3c3ae77be8ed5e7f 285 Gene3D G3DSA:2.60.120.10 11 120 5.1E-13 T 14-10-2018 IPR014710 RmlC-like jelly roll fold PhaeoP54_00687 627e36021ef005bf3c3ae77be8ed5e7f 285 Pfam PF04962 KduI/IolB family 12 269 6.2E-70 T 14-10-2018 IPR021120 KduI/IolB isomerase GO:0016861 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 PhaeoP54_00687 627e36021ef005bf3c3ae77be8ed5e7f 285 Gene3D G3DSA:2.60.120.10 121 274 2.4E-34 T 14-10-2018 IPR014710 RmlC-like jelly roll fold PhaeoP54_00687 627e36021ef005bf3c3ae77be8ed5e7f 285 SUPERFAMILY SSF51182 12 253 1.47E-37 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily PhaeoP54_00329 b6797f871797b739b489c3a59049cb23 129 SUPERFAMILY SSF161084 2 129 3.4E-29 T 14-10-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily PhaeoP54_00329 b6797f871797b739b489c3a59049cb23 129 Gene3D G3DSA:1.20.120.550 4 129 1.4E-20 T 14-10-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily PhaeoP54_00329 b6797f871797b739b489c3a59049cb23 129 Pfam PF01124 MAPEG family 8 128 2.7E-22 T 14-10-2018 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein PhaeoP54_00116 21a5330b47539952a56b32bdc9d568b2 148 SUPERFAMILY SSF47226 34 139 7.53E-7 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 PhaeoP54_00116 21a5330b47539952a56b32bdc9d568b2 148 Gene3D G3DSA:1.20.120.160 28 141 3.7E-7 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 PhaeoP54_01886 f94f999cc80111cdd07bf916f9c09261 281 Gene3D G3DSA:1.10.8.100 215 280 1.7E-20 T 14-10-2018 IPR023165 rRNA adenine dimethylase-like Reactome: R-HSA-2151201|Reactome: R-HSA-6793080 PhaeoP54_01886 f94f999cc80111cdd07bf916f9c09261 281 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 51 79 - T 14-10-2018 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 PhaeoP54_01886 f94f999cc80111cdd07bf916f9c09261 281 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 19 278 50.948 T 14-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 PhaeoP54_01886 f94f999cc80111cdd07bf916f9c09261 281 SUPERFAMILY SSF53335 19 278 1.36E-73 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PhaeoP54_01886 f94f999cc80111cdd07bf916f9c09261 281 Pfam PF00398 Ribosomal RNA adenine dimethylase 21 273 2.9E-46 T 14-10-2018 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm PhaeoP54_01886 f94f999cc80111cdd07bf916f9c09261 281 Gene3D G3DSA:3.40.50.150 1 214 9.1E-68 T 14-10-2018 PhaeoP54_01886 f94f999cc80111cdd07bf916f9c09261 281 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 21 276 1.4E-67 T 14-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 PhaeoP54_01886 f94f999cc80111cdd07bf916f9c09261 281 SMART SM00650 35 210 1.9E-66 T 14-10-2018 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 PhaeoP54_04072 5387dbbbc20edc6bc3fef49f0797facd 258 SUPERFAMILY SSF53850 1 249 9.78E-58 T 14-10-2018 PhaeoP54_04072 5387dbbbc20edc6bc3fef49f0797facd 258 SMART SM00062 26 248 3.9E-66 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PhaeoP54_04072 5387dbbbc20edc6bc3fef49f0797facd 258 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 27 246 1.3E-55 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PhaeoP54_04072 5387dbbbc20edc6bc3fef49f0797facd 258 Gene3D G3DSA:3.40.190.10 109 208 3.7E-57 T 14-10-2018 PhaeoP54_04072 5387dbbbc20edc6bc3fef49f0797facd 258 SMART SM00079 26 247 0.0032 T 14-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 PhaeoP54_04072 5387dbbbc20edc6bc3fef49f0797facd 258 Gene3D G3DSA:3.40.190.10 24 245 3.7E-57 T 14-10-2018 PhaeoP54_03991 01c92e80b31500fc24c492ce024d988c 381 SUPERFAMILY SSF53955 154 259 2.66E-33 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily PhaeoP54_03991 01c92e80b31500fc24c492ce024d988c 381 Pfam PF01464 Transglycosylase SLT domain 154 250 1.3E-19 T 14-10-2018 IPR008258 Transglycosylase SLT domain 1 PhaeoP54_03991 01c92e80b31500fc24c492ce024d988c 381 Gene3D G3DSA:1.10.530.10 150 265 1.9E-32 T 14-10-2018 PhaeoP54_02420 35a53781e9c7e147464a23d77bad5db4 169 ProSitePatterns PS00078 CO II and nitrous oxide reductase dinuclear copper centers signature. 106 158 - T 14-10-2018 IPR001505 Copper centre Cu(A) GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PhaeoP54_02420 35a53781e9c7e147464a23d77bad5db4 169 Gene3D G3DSA:2.60.40.420 63 164 2.5E-27 T 14-10-2018 IPR008972 Cupredoxin PhaeoP54_02420 35a53781e9c7e147464a23d77bad5db4 169 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 91 159 1.9E-7 T 14-10-2018 IPR002429 Cytochrome c oxidase subunit II-like C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PhaeoP54_02420 35a53781e9c7e147464a23d77bad5db4 169 SUPERFAMILY SSF49503 68 165 7.11E-24 T 14-10-2018 IPR008972 Cupredoxin PhaeoP54_03316 700a7ac3817e6747e37fc6a1a67bd1ae 1603 Gene3D G3DSA:2.150.10.10 1486 1603 7.1E-17 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal PhaeoP54_03316 700a7ac3817e6747e37fc6a1a67bd1ae 1603 SUPERFAMILY SSF51120 992 1165 6.28E-14 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal PhaeoP54_03316 700a7ac3817e6747e37fc6a1a67bd1ae 1603 SUPERFAMILY SSF51120 1400 1459 3.79E-10 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal PhaeoP54_03316 700a7ac3817e6747e37fc6a1a67bd1ae 1603 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1325 1343 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site PhaeoP54_03316 700a7ac3817e6747e37fc6a1a67bd1ae 1603 PRINTS PR01488 Gram-negative bacterial RTX toxin determinant A family signature 601 622 3.4E-15 T 14-10-2018 IPR003995 RTX toxin determinant A GO:0005509|GO:0005576|GO:0009405 PhaeoP54_03316 700a7ac3817e6747e37fc6a1a67bd1ae 1603 PRINTS PR01488 Gram-negative bacterial RTX toxin determinant A family signature 509 529 3.4E-15 T 14-10-2018 IPR003995 RTX toxin determinant A GO:0005509|GO:0005576|GO:0009405 PhaeoP54_03316 700a7ac3817e6747e37fc6a1a67bd1ae 1603 PRINTS PR01488 Gram-negative bacterial RTX toxin determinant A family signature 654 678 3.4E-15 T 14-10-2018 IPR003995 RTX toxin determinant A GO:0005509|GO:0005576|GO:0009405 PhaeoP54_03316 700a7ac3817e6747e37fc6a1a67bd1ae 1603 PRINTS PR01488 Gram-negative bacterial RTX toxin determinant A family signature 1038 1059 3.4E-15 T 14-10-2018 IPR003995 RTX toxin determinant A GO:0005509|GO:0005576|GO:0009405 PhaeoP54_03316 700a7ac3817e6747e37fc6a1a67bd1ae 1603 PRINTS PR00313 NodO calcium binding signature 1437 1445 1.8E-7 T 14-10-2018 PhaeoP54_03316 700a7ac3817e6747e37fc6a1a67bd1ae 1603 PRINTS PR00313 NodO calcium binding signature 1338 1346 1.8E-7 T 14-10-2018 PhaeoP54_03316 700a7ac3817e6747e37fc6a1a67bd1ae 1603 PRINTS PR00313 NodO calcium binding signature 1326 1337 1.8E-7 T 14-10-2018 PhaeoP54_03316 700a7ac3817e6747e37fc6a1a67bd1ae 1603 PRINTS PR00313 NodO calcium binding signature 1446 1455 1.8E-7 T 14-10-2018 PhaeoP54_03316 700a7ac3817e6747e37fc6a1a67bd1ae 1603 Gene3D G3DSA:2.150.10.10 1391 1485 9.2E-13 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal PhaeoP54_03316 700a7ac3817e6747e37fc6a1a67bd1ae 1603 Gene3D G3DSA:2.150.10.10 1294 1389 9.9E-14 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal PhaeoP54_03316 700a7ac3817e6747e37fc6a1a67bd1ae 1603 Gene3D G3DSA:2.150.10.10 1027 1177 1.3E-13 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal PhaeoP54_03316 700a7ac3817e6747e37fc6a1a67bd1ae 1603 SUPERFAMILY SSF51120 1172 1365 1.36E-11 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal PhaeoP54_03316 700a7ac3817e6747e37fc6a1a67bd1ae 1603 Pfam PF02382 RTX N-terminal domain 323 756 3.0E-38 T 14-10-2018 IPR018504 RTX N-terminal GO:0005509|GO:0005576|GO:0009405 PhaeoP54_03316 700a7ac3817e6747e37fc6a1a67bd1ae 1603 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1334 1352 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site PhaeoP54_03316 700a7ac3817e6747e37fc6a1a67bd1ae 1603 SUPERFAMILY SSF51120 1442 1564 1.57E-16 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal PhaeoP54_03555 8f0617d25375602febf1f61a1f8b6b1c 309 SUPERFAMILY SSF56784 94 304 3.66E-44 T 14-10-2018 IPR036412 HAD-like superfamily PhaeoP54_03555 8f0617d25375602febf1f61a1f8b6b1c 309 Gene3D G3DSA:3.40.50.1000 57 300 2.8E-67 T 14-10-2018 IPR023214 HAD superfamily PhaeoP54_03555 8f0617d25375602febf1f61a1f8b6b1c 309 TIGRFAM TIGR00338 serB: phosphoserine phosphatase SerB 90 299 2.5E-63 T 14-10-2018 PhaeoP54_03555 8f0617d25375602febf1f61a1f8b6b1c 309 Pfam PF12710 haloacid dehalogenase-like hydrolase 98 265 3.8E-18 T 14-10-2018 PhaeoP54_03555 8f0617d25375602febf1f61a1f8b6b1c 309 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 98 266 5.7E-32 T 14-10-2018 PhaeoP54_03838 27683bb3ee923eb0e362e96e802375e3 100 SUPERFAMILY SSF55008 20 96 3.27E-10 T 14-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 PhaeoP54_03838 27683bb3ee923eb0e362e96e802375e3 100 Gene3D G3DSA:3.30.70.100 20 95 2.5E-10 T 14-10-2018 PhaeoP54_02317 b0e1c68ec2a1a24637204f6e5dfb0d0b 498 SUPERFAMILY SSF53738 19 154 3.81E-28 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PhaeoP54_02317 b0e1c68ec2a1a24637204f6e5dfb0d0b 498 Gene3D G3DSA:3.40.120.10 16 166 1.6E-28 T 14-10-2018 PhaeoP54_02317 b0e1c68ec2a1a24637204f6e5dfb0d0b 498 SUPERFAMILY SSF53738 277 386 9.81E-17 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PhaeoP54_02317 b0e1c68ec2a1a24637204f6e5dfb0d0b 498 SUPERFAMILY SSF55957 389 487 1.44E-14 T 14-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PhaeoP54_02317 b0e1c68ec2a1a24637204f6e5dfb0d0b 498 Gene3D G3DSA:3.30.310.50 392 490 1.5E-16 T 14-10-2018 PhaeoP54_02317 b0e1c68ec2a1a24637204f6e5dfb0d0b 498 Gene3D G3DSA:3.40.120.10 269 390 1.2E-23 T 14-10-2018 PhaeoP54_02317 b0e1c68ec2a1a24637204f6e5dfb0d0b 498 SUPERFAMILY SSF53738 172 272 7.06E-25 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PhaeoP54_02317 b0e1c68ec2a1a24637204f6e5dfb0d0b 498 Gene3D G3DSA:3.40.120.10 190 267 4.0E-24 T 14-10-2018 PhaeoP54_02317 b0e1c68ec2a1a24637204f6e5dfb0d0b 498 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 188 207 2.3E-13 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PhaeoP54_02317 b0e1c68ec2a1a24637204f6e5dfb0d0b 498 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 114 128 2.3E-13 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PhaeoP54_02317 b0e1c68ec2a1a24637204f6e5dfb0d0b 498 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 251 266 2.3E-13 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PhaeoP54_02317 b0e1c68ec2a1a24637204f6e5dfb0d0b 498 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 222 235 2.3E-13 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PhaeoP54_02317 b0e1c68ec2a1a24637204f6e5dfb0d0b 498 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 277 390 6.2E-12 T 14-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PhaeoP54_02317 b0e1c68ec2a1a24637204f6e5dfb0d0b 498 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 26 153 7.0E-23 T 14-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PhaeoP54_02317 b0e1c68ec2a1a24637204f6e5dfb0d0b 498 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 174 271 2.7E-24 T 14-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PhaeoP54_02317 b0e1c68ec2a1a24637204f6e5dfb0d0b 498 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 419 486 5.7E-7 T 14-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PhaeoP54_00185 0a176d906468c44cf34c34c03b355afd 210 Pfam PF00589 Phage integrase family 44 195 8.6E-14 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 PhaeoP54_00185 0a176d906468c44cf34c34c03b355afd 210 SUPERFAMILY SSF56349 24 207 3.24E-28 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 PhaeoP54_00185 0a176d906468c44cf34c34c03b355afd 210 Gene3D G3DSA:1.10.443.10 23 196 6.6E-20 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 PhaeoP54_03338 987175230668d354b48528e1d83ea559 230 ProSitePatterns PS00211 ABC transporters family signature. 130 144 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PhaeoP54_03338 987175230668d354b48528e1d83ea559 230 SUPERFAMILY SSF52540 1 224 1.59E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_03338 987175230668d354b48528e1d83ea559 230 Pfam PF00005 ABC transporter 19 158 5.1E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PhaeoP54_03338 987175230668d354b48528e1d83ea559 230 SMART SM00382 24 207 3.2E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_03338 987175230668d354b48528e1d83ea559 230 Gene3D G3DSA:3.40.50.300 15 229 4.5E-56 T 14-10-2018 PhaeoP54_03358 9b5820fbb3c8ddf21c2b643b52024bee 387 Gene3D G3DSA:1.20.140.10 238 386 6.6E-53 T 14-10-2018 PhaeoP54_03358 9b5820fbb3c8ddf21c2b643b52024bee 387 Gene3D G3DSA:2.40.110.10 122 237 1.6E-34 T 14-10-2018 PhaeoP54_03358 9b5820fbb3c8ddf21c2b643b52024bee 387 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 340 359 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 PhaeoP54_03358 9b5820fbb3c8ddf21c2b643b52024bee 387 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 124 136 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 PhaeoP54_03358 9b5820fbb3c8ddf21c2b643b52024bee 387 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 233 381 4.7E-52 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PhaeoP54_03358 9b5820fbb3c8ddf21c2b643b52024bee 387 PIRSF PIRSF016578 6 201 2.1E-6 T 14-10-2018 PhaeoP54_03358 9b5820fbb3c8ddf21c2b643b52024bee 387 PIRSF PIRSF016578 239 386 3.0E-15 T 14-10-2018 PhaeoP54_03358 9b5820fbb3c8ddf21c2b643b52024bee 387 SUPERFAMILY SSF56645 2 244 8.25E-70 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 PhaeoP54_03358 9b5820fbb3c8ddf21c2b643b52024bee 387 Gene3D G3DSA:1.10.540.10 1 120 1.5E-28 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 PhaeoP54_03358 9b5820fbb3c8ddf21c2b643b52024bee 387 SUPERFAMILY SSF47203 231 384 3.06E-56 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 PhaeoP54_03358 9b5820fbb3c8ddf21c2b643b52024bee 387 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 118 5.9E-24 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 PhaeoP54_03358 9b5820fbb3c8ddf21c2b643b52024bee 387 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 122 221 1.1E-23 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 PhaeoP54_03469 bf7ba33e7d8eee2e34e9c4a0cd4e4794 1122 Pfam PF12705 PD-(D/E)XK nuclease superfamily 957 1088 1.1E-7 T 14-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type PhaeoP54_03469 bf7ba33e7d8eee2e34e9c4a0cd4e4794 1122 Gene3D G3DSA:1.10.486.10 622 759 6.0E-9 T 14-10-2018 PhaeoP54_03469 bf7ba33e7d8eee2e34e9c4a0cd4e4794 1122 SUPERFAMILY SSF52980 961 1087 3.43E-6 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 PhaeoP54_03469 bf7ba33e7d8eee2e34e9c4a0cd4e4794 1122 Gene3D G3DSA:3.40.50.300 475 621 2.2E-6 T 14-10-2018 PhaeoP54_03469 bf7ba33e7d8eee2e34e9c4a0cd4e4794 1122 Gene3D G3DSA:3.40.50.300 760 892 1.1E-19 T 14-10-2018 PhaeoP54_03469 bf7ba33e7d8eee2e34e9c4a0cd4e4794 1122 SUPERFAMILY SSF52540 10 883 3.26E-109 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_03469 bf7ba33e7d8eee2e34e9c4a0cd4e4794 1122 TIGRFAM TIGR02784 addA_alphas: double-strand break repair helicase AddA 9 1107 0.0 T 14-10-2018 IPR014151 DNA helicase, AddA type PhaeoP54_03469 bf7ba33e7d8eee2e34e9c4a0cd4e4794 1122 Pfam PF13361 UvrD-like helicase C-terminal domain 768 861 7.8E-12 T 14-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 PhaeoP54_03469 bf7ba33e7d8eee2e34e9c4a0cd4e4794 1122 Gene3D G3DSA:3.40.50.300 250 461 5.2E-31 T 14-10-2018 PhaeoP54_03469 bf7ba33e7d8eee2e34e9c4a0cd4e4794 1122 Pfam PF00580 UvrD/REP helicase N-terminal domain 11 456 1.7E-53 T 14-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 PhaeoP54_00267 c06e611af22050f1b0447d83e719718d 242 Pfam PF04452 RNA methyltransferase 20 235 2.1E-58 T 14-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 PhaeoP54_00267 c06e611af22050f1b0447d83e719718d 242 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 16 239 5.1E-38 T 14-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 PhaeoP54_00267 c06e611af22050f1b0447d83e719718d 242 PIRSF PIRSF015601 4 241 9.9E-58 T 14-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 PhaeoP54_00267 c06e611af22050f1b0447d83e719718d 242 SUPERFAMILY SSF88697 5 72 1.66E-16 T 14-10-2018 IPR015947 PUA-like superfamily PhaeoP54_00267 c06e611af22050f1b0447d83e719718d 242 Gene3D G3DSA:3.40.1280.10 74 242 2.1E-50 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal PhaeoP54_00267 c06e611af22050f1b0447d83e719718d 242 SUPERFAMILY SSF75217 75 241 8.29E-47 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases PhaeoP54_00267 c06e611af22050f1b0447d83e719718d 242 Gene3D G3DSA:2.40.240.20 5 73 1.4E-29 T 14-10-2018 PhaeoP54_02271 e0f323e8872c10b2bbd0693cc47c37ce 204 TIGRFAM TIGR01323 nitrile_alph: nitrile hydratase, alpha subunit 17 202 1.2E-93 T 14-10-2018 IPR018141 Nitrile hydratase, alpha subunit GO:0006807|GO:0018822|GO:0046914 KEGG: 00364+4.2.1.84|KEGG: 00380+4.2.1.84|KEGG: 00627+4.2.1.84|KEGG: 00643+4.2.1.84|MetaCyc: PWY-5025|MetaCyc: PWY-581|MetaCyc: PWY-7308 PhaeoP54_02271 e0f323e8872c10b2bbd0693cc47c37ce 204 PIRSF PIRSF001426 1 204 1.4E-89 T 14-10-2018 IPR023900 Nitrile hydratase alpha subunit /Thiocyanate hydrolase gamma subunit KEGG: 00364+4.2.1.84|KEGG: 00380+4.2.1.84|KEGG: 00627+4.2.1.84|KEGG: 00643+4.2.1.84|MetaCyc: PWY-5025|MetaCyc: PWY-581|MetaCyc: PWY-7308 PhaeoP54_02271 e0f323e8872c10b2bbd0693cc47c37ce 204 Pfam PF02979 Nitrile hydratase, alpha chain 18 197 8.1E-86 T 14-10-2018 IPR004232 Nitrile hydratase alpha /Thiocyanate hydrolase gamma GO:0003824|GO:0006807|GO:0046914 KEGG: 00364+4.2.1.84|KEGG: 00380+4.2.1.84|KEGG: 00627+4.2.1.84|KEGG: 00643+4.2.1.84|MetaCyc: PWY-5025|MetaCyc: PWY-581|MetaCyc: PWY-7308 PhaeoP54_02271 e0f323e8872c10b2bbd0693cc47c37ce 204 SUPERFAMILY SSF56209 3 201 5.36E-85 T 14-10-2018 IPR036648 Nitrile hydratase alpha /Thiocyanate hydrolase gamma superfamily GO:0003824|GO:0006807|GO:0046914 KEGG: 00364+4.2.1.84|KEGG: 00380+4.2.1.84|KEGG: 00627+4.2.1.84|KEGG: 00643+4.2.1.84|MetaCyc: PWY-5025|MetaCyc: PWY-581|MetaCyc: PWY-7308 PhaeoP54_02271 e0f323e8872c10b2bbd0693cc47c37ce 204 Gene3D G3DSA:3.90.330.10 1 204 7.9E-89 T 14-10-2018 IPR036648 Nitrile hydratase alpha /Thiocyanate hydrolase gamma superfamily GO:0003824|GO:0006807|GO:0046914 KEGG: 00364+4.2.1.84|KEGG: 00380+4.2.1.84|KEGG: 00627+4.2.1.84|KEGG: 00643+4.2.1.84|MetaCyc: PWY-5025|MetaCyc: PWY-581|MetaCyc: PWY-7308 PhaeoP54_02271 e0f323e8872c10b2bbd0693cc47c37ce 204 ProDom PD007559 HYDRATASE NITRILE ALPHA SUBUNIT LYASE CHAIN METAL-BINDING DIRECT SEQUENCING NITRILASE 20 199 6.0E-84 T 14-10-2018 IPR004232 Nitrile hydratase alpha /Thiocyanate hydrolase gamma GO:0003824|GO:0006807|GO:0046914 KEGG: 00364+4.2.1.84|KEGG: 00380+4.2.1.84|KEGG: 00627+4.2.1.84|KEGG: 00643+4.2.1.84|MetaCyc: PWY-5025|MetaCyc: PWY-581|MetaCyc: PWY-7308 PhaeoP54_00918 1fda4408587436e1cbc1f17da7a1e906 193 Pfam PF02381 MraZ protein, putative antitoxin-like 121 165 4.0E-9 T 14-10-2018 IPR020603 MraZ domain PhaeoP54_00918 1fda4408587436e1cbc1f17da7a1e906 193 Pfam PF02381 MraZ protein, putative antitoxin-like 31 102 1.5E-5 T 14-10-2018 IPR020603 MraZ domain PhaeoP54_00918 1fda4408587436e1cbc1f17da7a1e906 193 ProDom PD006745 MRAZ YABB DIVISION CELL 3D-STRUCTURE UNCHARACTERIZED BCR SIMILAR PROTEIN 31 157 5.0E-12 T 14-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 PhaeoP54_00918 1fda4408587436e1cbc1f17da7a1e906 193 Hamap MF_01008 Transcriptional regulator MraZ [mraZ]. 1 193 36.34 T 14-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 PhaeoP54_00918 1fda4408587436e1cbc1f17da7a1e906 193 Gene3D G3DSA:2.40.330.20 27 181 4.6E-31 T 14-10-2018 IPR038619 MraZ superfamily PhaeoP54_00918 1fda4408587436e1cbc1f17da7a1e906 193 SUPERFAMILY SSF89447 30 166 5.23E-38 T 14-10-2018 IPR037914 SpoVT-AbrB domain superfamily PhaeoP54_01268 3293e0db8faa569030a0fd88babf6988 281 Gene3D G3DSA:1.10.3720.10 73 273 1.8E-15 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_01268 3293e0db8faa569030a0fd88babf6988 281 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 100 272 1.6E-21 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PhaeoP54_01268 3293e0db8faa569030a0fd88babf6988 281 SUPERFAMILY SSF161098 78 256 8.37E-20 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_02563 b5432d55d3681aac61b2e16d4ea113b5 400 Pfam PF02441 Flavoprotein 5 179 2.7E-43 T 14-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 PhaeoP54_02563 b5432d55d3681aac61b2e16d4ea113b5 400 Gene3D G3DSA:3.40.50.10300 181 400 5.2E-71 T 14-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 PhaeoP54_02563 b5432d55d3681aac61b2e16d4ea113b5 400 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 184 368 6.7E-64 T 14-10-2018 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 PhaeoP54_02563 b5432d55d3681aac61b2e16d4ea113b5 400 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 2 392 2.5E-123 T 14-10-2018 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|MetaCyc: PWY-7851 PhaeoP54_02563 b5432d55d3681aac61b2e16d4ea113b5 400 SUPERFAMILY SSF52507 1 179 3.66E-59 T 14-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 PhaeoP54_02563 b5432d55d3681aac61b2e16d4ea113b5 400 Gene3D G3DSA:3.40.50.1950 1 180 8.9E-55 T 14-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 PhaeoP54_02563 b5432d55d3681aac61b2e16d4ea113b5 400 SUPERFAMILY SSF102645 182 396 7.32E-71 T 14-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 PhaeoP54_01361 2a16cb2e0322e4ba9c5b4d1be98f283f 257 SUPERFAMILY SSF56214 118 231 9.59E-25 T 14-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 PhaeoP54_01361 2a16cb2e0322e4ba9c5b4d1be98f283f 257 Gene3D G3DSA:3.90.470.20 119 224 1.0E-39 T 14-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 PhaeoP54_01361 2a16cb2e0322e4ba9c5b4d1be98f283f 257 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 118 180 1.4E-12 T 14-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 PhaeoP54_01361 2a16cb2e0322e4ba9c5b4d1be98f283f 257 SUPERFAMILY SSF56214 33 110 8.63E-17 T 14-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 PhaeoP54_01361 2a16cb2e0322e4ba9c5b4d1be98f283f 257 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 119 198 1.4E-16 T 14-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 PhaeoP54_01361 2a16cb2e0322e4ba9c5b4d1be98f283f 257 Gene3D G3DSA:3.90.470.20 37 229 1.0E-39 T 14-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 PhaeoP54_03085 a8d04236fe2197b6a92978de631a5736 561 SUPERFAMILY SSF56645 175 422 7.2E-68 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 PhaeoP54_03085 a8d04236fe2197b6a92978de631a5736 561 SUPERFAMILY SSF47203 409 560 6.28E-48 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 PhaeoP54_03085 a8d04236fe2197b6a92978de631a5736 561 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 518 537 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 PhaeoP54_03085 a8d04236fe2197b6a92978de631a5736 561 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 411 560 1.5E-42 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PhaeoP54_03085 a8d04236fe2197b6a92978de631a5736 561 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 178 289 1.1E-31 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 PhaeoP54_03085 a8d04236fe2197b6a92978de631a5736 561 Gene3D G3DSA:1.20.140.10 417 561 6.4E-46 T 14-10-2018 PhaeoP54_03085 a8d04236fe2197b6a92978de631a5736 561 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 296 396 2.7E-19 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 PhaeoP54_03085 a8d04236fe2197b6a92978de631a5736 561 Gene3D G3DSA:2.40.110.10 293 416 1.6E-29 T 14-10-2018 PhaeoP54_03085 a8d04236fe2197b6a92978de631a5736 561 Gene3D G3DSA:1.10.540.10 170 291 5.1E-34 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 PhaeoP54_02454 331187165cabece508a4b188863b3c30 387 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 314 379 1.0E-9 T 14-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 PhaeoP54_02454 331187165cabece508a4b188863b3c30 387 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 337 345 - T 14-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 PhaeoP54_02454 331187165cabece508a4b188863b3c30 387 Gene3D G3DSA:3.40.50.80 147 279 1.7E-31 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain PhaeoP54_02454 331187165cabece508a4b188863b3c30 387 Pfam PF00970 Oxidoreductase FAD-binding domain 63 148 1.0E-11 T 14-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 PhaeoP54_02454 331187165cabece508a4b188863b3c30 387 Gene3D G3DSA:2.40.30.10 47 146 1.6E-22 T 14-10-2018 PhaeoP54_02454 331187165cabece508a4b188863b3c30 387 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 79 89 1.4E-5 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 PhaeoP54_02454 331187165cabece508a4b188863b3c30 387 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 184 193 1.4E-5 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 PhaeoP54_02454 331187165cabece508a4b188863b3c30 387 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 196 207 1.4E-5 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 PhaeoP54_02454 331187165cabece508a4b188863b3c30 387 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 159 178 1.4E-5 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 PhaeoP54_02454 331187165cabece508a4b188863b3c30 387 Pfam PF00175 Oxidoreductase NAD-binding domain 160 263 7.8E-18 T 14-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 PhaeoP54_02454 331187165cabece508a4b188863b3c30 387 SUPERFAMILY SSF63380 43 149 1.7E-23 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel PhaeoP54_02454 331187165cabece508a4b188863b3c30 387 PRINTS PR00410 Phenol hydroxylase reductase family signature 159 178 3.3E-13 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 PhaeoP54_02454 331187165cabece508a4b188863b3c30 387 PRINTS PR00410 Phenol hydroxylase reductase family signature 250 258 3.3E-13 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 PhaeoP54_02454 331187165cabece508a4b188863b3c30 387 PRINTS PR00410 Phenol hydroxylase reductase family signature 79 91 3.3E-13 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 PhaeoP54_02454 331187165cabece508a4b188863b3c30 387 PRINTS PR00410 Phenol hydroxylase reductase family signature 184 193 3.3E-13 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 PhaeoP54_02454 331187165cabece508a4b188863b3c30 387 SUPERFAMILY SSF54292 277 387 1.04E-19 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 PhaeoP54_02454 331187165cabece508a4b188863b3c30 387 SUPERFAMILY SSF52343 138 280 6.02E-35 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain PhaeoP54_02454 331187165cabece508a4b188863b3c30 387 Gene3D G3DSA:3.10.20.30 296 387 1.6E-19 T 14-10-2018 IPR012675 Beta-grasp domain superfamily PhaeoP54_01134 cf1a1329a1d2c8cfa4cd9e5b8c508ced 238 SUPERFAMILY SSF161098 7 208 6.54E-25 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_01134 cf1a1329a1d2c8cfa4cd9e5b8c508ced 238 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 2 222 1.2E-14 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PhaeoP54_01414 ba28d4fb1a39d84361d702308da47abc 381 SUPERFAMILY SSF52402 21 264 3.75E-45 T 14-10-2018 PhaeoP54_01414 ba28d4fb1a39d84361d702308da47abc 381 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 21 378 38.232 T 14-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 PhaeoP54_01414 ba28d4fb1a39d84361d702308da47abc 381 Gene3D G3DSA:2.40.30.10 295 380 1.7E-14 T 14-10-2018 PhaeoP54_01414 ba28d4fb1a39d84361d702308da47abc 381 Gene3D G3DSA:3.40.50.620 14 230 1.2E-68 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PhaeoP54_01414 ba28d4fb1a39d84361d702308da47abc 381 Pfam PF03054 tRNA methyl transferase 22 377 7.8E-110 T 14-10-2018 PhaeoP54_01414 ba28d4fb1a39d84361d702308da47abc 381 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 22 377 2.8E-95 T 14-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 PhaeoP54_01414 ba28d4fb1a39d84361d702308da47abc 381 Gene3D G3DSA:2.30.30.280 235 294 1.2E-19 T 14-10-2018 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 PhaeoP54_01816 fbf7ff9ec938c0c0c6e84ac582a9e4c6 393 Pfam PF14842 FliG N-terminal domain 60 158 1.4E-12 T 14-10-2018 IPR028263 Flagellar motor switch protein FliG, N-terminal domain PhaeoP54_01816 fbf7ff9ec938c0c0c6e84ac582a9e4c6 393 Pfam PF14841 FliG middle domain 171 241 1.2E-10 T 14-10-2018 IPR032779 Flagellar motor switch protein FliG, middle domain PhaeoP54_01816 fbf7ff9ec938c0c0c6e84ac582a9e4c6 393 SUPERFAMILY SSF48029 171 384 1.96E-40 T 14-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical PhaeoP54_01816 fbf7ff9ec938c0c0c6e84ac582a9e4c6 393 SUPERFAMILY SSF48029 63 150 1.26E-6 T 14-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical PhaeoP54_01816 fbf7ff9ec938c0c0c6e84ac582a9e4c6 393 PRINTS PR00954 Flagellar motor switch protein FliG signature 61 77 4.0E-12 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 PhaeoP54_01816 fbf7ff9ec938c0c0c6e84ac582a9e4c6 393 PRINTS PR00954 Flagellar motor switch protein FliG signature 90 116 4.0E-12 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 PhaeoP54_01816 fbf7ff9ec938c0c0c6e84ac582a9e4c6 393 PRINTS PR00954 Flagellar motor switch protein FliG signature 170 193 4.0E-12 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 PhaeoP54_01816 fbf7ff9ec938c0c0c6e84ac582a9e4c6 393 PRINTS PR00954 Flagellar motor switch protein FliG signature 332 358 4.0E-12 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 PhaeoP54_01816 fbf7ff9ec938c0c0c6e84ac582a9e4c6 393 Gene3D G3DSA:1.10.220.30 56 133 3.1E-10 T 14-10-2018 PhaeoP54_01816 fbf7ff9ec938c0c0c6e84ac582a9e4c6 393 Gene3D G3DSA:1.10.220.30 156 248 6.8E-11 T 14-10-2018 PhaeoP54_01816 fbf7ff9ec938c0c0c6e84ac582a9e4c6 393 Pfam PF01706 FliG C-terminal domain 273 384 2.9E-25 T 14-10-2018 IPR023087 Flagellar motor switch protein FliG, C-terminal PhaeoP54_01816 fbf7ff9ec938c0c0c6e84ac582a9e4c6 393 Gene3D G3DSA:1.10.220.30 251 392 9.9E-32 T 14-10-2018 PhaeoP54_00466 67a040c047e20a9524436fb5bc413ebc 263 Gene3D G3DSA:3.20.20.70 1 262 3.7E-101 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PhaeoP54_00466 67a040c047e20a9524436fb5bc413ebc 263 Pfam PF00290 Tryptophan synthase alpha chain 8 242 1.4E-96 T 14-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 PhaeoP54_00466 67a040c047e20a9524436fb5bc413ebc 263 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 48 61 - T 14-10-2018 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 PhaeoP54_00466 67a040c047e20a9524436fb5bc413ebc 263 SUPERFAMILY SSF51366 1 243 9.42E-91 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 PhaeoP54_00466 67a040c047e20a9524436fb5bc413ebc 263 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 8 242 9.2E-81 T 14-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 PhaeoP54_00466 67a040c047e20a9524436fb5bc413ebc 263 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 14 259 37.535 T 14-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 PhaeoP54_02054 59af1ac93962e8997c45d20de0602b13 430 Pfam PF02687 FtsX-like permease family 316 423 1.7E-11 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 PhaeoP54_02054 59af1ac93962e8997c45d20de0602b13 430 Pfam PF12704 MacB-like periplasmic core domain 32 250 3.7E-16 T 14-10-2018 IPR025857 MacB-like periplasmic core domain PhaeoP54_02054 59af1ac93962e8997c45d20de0602b13 430 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 10 430 1.5E-111 T 14-10-2018 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 PhaeoP54_01730 ad53758a1d1324ae356aa755ce986192 291 Gene3D G3DSA:3.40.50.720 1 155 1.1E-47 T 14-10-2018 PhaeoP54_01730 ad53758a1d1324ae356aa755ce986192 291 Gene3D G3DSA:1.10.1040.10 156 289 4.2E-47 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 PhaeoP54_01730 ad53758a1d1324ae356aa755ce986192 291 SUPERFAMILY SSF48179 154 285 4.59E-42 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 PhaeoP54_01730 ad53758a1d1324ae356aa755ce986192 291 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 156 281 2.6E-43 T 14-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 PhaeoP54_01730 ad53758a1d1324ae356aa755ce986192 291 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 5 18 - T 14-10-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 PhaeoP54_01730 ad53758a1d1324ae356aa755ce986192 291 TIGRFAM TIGR01692 HIBADH: 3-hydroxyisobutyrate dehydrogenase 5 281 2.5E-116 T 14-10-2018 IPR011548 3-hydroxyisobutyrate dehydrogenase GO:0008442|GO:0051287|GO:0055114 KEGG: 00280+1.1.1.31|Reactome: R-HSA-70895 PhaeoP54_01730 ad53758a1d1324ae356aa755ce986192 291 PIRSF PIRSF000103 1 291 7.3E-76 T 14-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 PhaeoP54_01730 ad53758a1d1324ae356aa755ce986192 291 SUPERFAMILY SSF51735 1 154 9.71E-44 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PhaeoP54_01730 ad53758a1d1324ae356aa755ce986192 291 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 2 153 2.5E-43 T 14-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 PhaeoP54_03809 990ef7e8ded970cd7e8f96880a3b7148 397 SUPERFAMILY SSF52540 113 359 1.38E-50 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_03809 990ef7e8ded970cd7e8f96880a3b7148 397 Pfam PF13614 AAA domain 113 286 6.2E-40 T 14-10-2018 IPR025669 AAA domain PhaeoP54_03809 990ef7e8ded970cd7e8f96880a3b7148 397 Pfam PF13411 MerR HTH family regulatory protein 43 90 1.0E-4 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PhaeoP54_03809 990ef7e8ded970cd7e8f96880a3b7148 397 SUPERFAMILY SSF46955 42 92 5.49E-7 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily PhaeoP54_03809 990ef7e8ded970cd7e8f96880a3b7148 397 Gene3D G3DSA:3.40.50.300 113 390 3.0E-67 T 14-10-2018 PhaeoP54_03809 990ef7e8ded970cd7e8f96880a3b7148 397 TIGRFAM TIGR03453 partition_RepA: plasmid partitioning protein RepA 12 392 3.2E-180 T 14-10-2018 IPR017818 Plasmid partitioning protein, RepA PhaeoP54_03809 990ef7e8ded970cd7e8f96880a3b7148 397 Gene3D G3DSA:1.10.1660.10 36 101 3.2E-8 T 14-10-2018 PhaeoP54_04068 4430c99a98eae3ce3c36240babff6111 241 Gene3D G3DSA:2.40.360.10 59 240 3.0E-19 T 14-10-2018 IPR023373 YmcC-like superfamily PhaeoP54_04068 4430c99a98eae3ce3c36240babff6111 241 Pfam PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF 21 237 9.8E-40 T 14-10-2018 IPR021308 Group 4 capsule polysaccharide formation lipoprotein GfcB PhaeoP54_04068 4430c99a98eae3ce3c36240babff6111 241 SUPERFAMILY SSF159270 46 238 1.7E-41 T 14-10-2018 IPR023373 YmcC-like superfamily PhaeoP54_02835 1c4142b8d34d8d2ca575459676b639a5 112 Gene3D G3DSA:3.30.70.120 1 112 1.5E-43 T 14-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal PhaeoP54_02835 1c4142b8d34d8d2ca575459676b639a5 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 2.0E-39 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 PhaeoP54_02835 1c4142b8d34d8d2ca575459676b639a5 112 SMART SM00938 4 105 1.3E-59 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 PhaeoP54_02835 1c4142b8d34d8d2ca575459676b639a5 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 14-10-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 PhaeoP54_02835 1c4142b8d34d8d2ca575459676b639a5 112 PIRSF PIRSF039144 1 112 5.8E-52 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 PhaeoP54_02835 1c4142b8d34d8d2ca575459676b639a5 112 PRINTS PR00340 P-II protein signature 23 41 7.0E-36 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 PhaeoP54_02835 1c4142b8d34d8d2ca575459676b639a5 112 PRINTS PR00340 P-II protein signature 2 17 7.0E-36 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 PhaeoP54_02835 1c4142b8d34d8d2ca575459676b639a5 112 PRINTS PR00340 P-II protein signature 52 75 7.0E-36 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 PhaeoP54_02835 1c4142b8d34d8d2ca575459676b639a5 112 PRINTS PR00340 P-II protein signature 83 103 7.0E-36 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 PhaeoP54_02835 1c4142b8d34d8d2ca575459676b639a5 112 SUPERFAMILY SSF54913 1 112 6.35E-42 T 14-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta PhaeoP54_02835 1c4142b8d34d8d2ca575459676b639a5 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 14-10-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 PhaeoP54_02186 5d6bdf20cf5cf601846855a054ae6a9c 417 Pfam PF10442 FIST C domain 264 391 2.6E-15 T 14-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 PhaeoP54_02186 5d6bdf20cf5cf601846855a054ae6a9c 417 Pfam PF08495 FIST N domain 67 261 1.2E-32 T 14-10-2018 IPR013702 FIST domain, N-terminal PhaeoP54_02186 5d6bdf20cf5cf601846855a054ae6a9c 417 SMART SM00897 64 263 9.6E-50 T 14-10-2018 IPR013702 FIST domain, N-terminal PhaeoP54_02186 5d6bdf20cf5cf601846855a054ae6a9c 417 SMART SM01204 264 393 2.7E-30 T 14-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 PhaeoP54_00156 b6abcdb245ed273c71a9a5ba78514890 193 Hamap MF_00528 Septum formation protein Maf [maf]. 2 187 29.159 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 PhaeoP54_00156 b6abcdb245ed273c71a9a5ba78514890 193 PIRSF PIRSF006305 1 187 3.0E-48 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 PhaeoP54_00156 b6abcdb245ed273c71a9a5ba78514890 193 Pfam PF02545 Maf-like protein 3 181 6.7E-50 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 PhaeoP54_00156 b6abcdb245ed273c71a9a5ba78514890 193 SUPERFAMILY SSF52972 2 181 7.19E-55 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like PhaeoP54_00156 b6abcdb245ed273c71a9a5ba78514890 193 Gene3D G3DSA:3.90.950.10 2 185 4.5E-57 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like PhaeoP54_00156 b6abcdb245ed273c71a9a5ba78514890 193 TIGRFAM TIGR00172 maf: septum formation protein Maf 2 181 2.0E-43 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 PhaeoP54_03212 8e11235d320f18b81e20d4c87e398d67 650 Pfam PF08676 MutL C terminal dimerisation domain 460 605 1.6E-48 T 14-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 PhaeoP54_03212 8e11235d320f18b81e20d4c87e398d67 650 SUPERFAMILY SSF54211 225 347 1.59E-31 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold PhaeoP54_03212 8e11235d320f18b81e20d4c87e398d67 650 SMART SM00853 464 607 8.8E-54 T 14-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 PhaeoP54_03212 8e11235d320f18b81e20d4c87e398d67 650 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 105 111 - T 14-10-2018 IPR014762 DNA mismatch repair, conserved site PhaeoP54_03212 8e11235d320f18b81e20d4c87e398d67 650 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 230 345 2.0E-32 T 14-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 PhaeoP54_03212 8e11235d320f18b81e20d4c87e398d67 650 Gene3D G3DSA:3.30.565.10 13 218 1.2E-61 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PhaeoP54_03212 8e11235d320f18b81e20d4c87e398d67 650 SUPERFAMILY SSF55874 16 208 3.01E-49 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PhaeoP54_03212 8e11235d320f18b81e20d4c87e398d67 650 Gene3D G3DSA:2.30.42.20 466 644 1.6E-57 T 14-10-2018 PhaeoP54_03212 8e11235d320f18b81e20d4c87e398d67 650 SUPERFAMILY SSF118116 460 649 2.35E-57 T 14-10-2018 IPR037198 MutL, C-terminal domain superfamily PhaeoP54_03212 8e11235d320f18b81e20d4c87e398d67 650 Gene3D G3DSA:3.30.230.10 234 345 4.9E-30 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PhaeoP54_03212 8e11235d320f18b81e20d4c87e398d67 650 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 37 130 3.7E-11 T 14-10-2018 PhaeoP54_03212 8e11235d320f18b81e20d4c87e398d67 650 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 16 327 6.9E-87 T 14-10-2018 IPR002099 DNA mismatch repair protein family, N-terminal GO:0005524|GO:0006298|GO:0030983 PhaeoP54_03212 8e11235d320f18b81e20d4c87e398d67 650 Gene3D G3DSA:3.30.1370.100 507 602 1.6E-57 T 14-10-2018 PhaeoP54_03212 8e11235d320f18b81e20d4c87e398d67 650 SMART SM01340 229 347 9.0E-50 T 14-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 PhaeoP54_03212 8e11235d320f18b81e20d4c87e398d67 650 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 14 647 26.737 T 14-10-2018 IPR020667 DNA mismatch repair protein, MutL GO:0006298 PhaeoP54_01783 d0c63ab243cbdba76eb0ed256ab301cc 421 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 163 179 - T 14-10-2018 IPR018201 Beta-ketoacyl synthase, active site PhaeoP54_01783 d0c63ab243cbdba76eb0ed256ab301cc 421 SUPERFAMILY SSF53901 223 420 2.88E-67 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 PhaeoP54_01783 d0c63ab243cbdba76eb0ed256ab301cc 421 Gene3D G3DSA:3.40.47.10 1 264 9.4E-89 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 PhaeoP54_01783 d0c63ab243cbdba76eb0ed256ab301cc 421 SMART SM00825 Beta-ketoacyl synthase 4 417 1.2E-15 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain PhaeoP54_01783 d0c63ab243cbdba76eb0ed256ab301cc 421 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 2 417 5.3E-189 T 14-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 PhaeoP54_01783 d0c63ab243cbdba76eb0ed256ab301cc 421 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 1 256 7.9E-61 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal PhaeoP54_01783 d0c63ab243cbdba76eb0ed256ab301cc 421 PIRSF PIRSF000447 1 421 2.9E-184 T 14-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 PhaeoP54_01783 d0c63ab243cbdba76eb0ed256ab301cc 421 SUPERFAMILY SSF53901 2 263 6.65E-76 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 PhaeoP54_01783 d0c63ab243cbdba76eb0ed256ab301cc 421 Gene3D G3DSA:3.40.47.10 270 419 1.2E-50 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 PhaeoP54_01783 d0c63ab243cbdba76eb0ed256ab301cc 421 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 264 377 7.9E-35 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal PhaeoP54_01047 22a60e58507b5f32f2bf35dd6920ff69 408 Gene3D G3DSA:2.70.70.10 282 408 1.3E-25 T 14-10-2018 IPR011055 Duplicated hybrid motif PhaeoP54_01047 22a60e58507b5f32f2bf35dd6920ff69 408 SUPERFAMILY SSF51261 263 407 2.72E-25 T 14-10-2018 IPR011055 Duplicated hybrid motif PhaeoP54_01047 22a60e58507b5f32f2bf35dd6920ff69 408 Gene3D G3DSA:3.10.350.10 55 130 1.6E-6 T 14-10-2018 IPR036779 LysM domain superfamily PhaeoP54_01047 22a60e58507b5f32f2bf35dd6920ff69 408 Gene3D G3DSA:3.10.350.10 165 238 4.6E-11 T 14-10-2018 IPR036779 LysM domain superfamily PhaeoP54_01047 22a60e58507b5f32f2bf35dd6920ff69 408 Pfam PF01551 Peptidase family M23 313 403 8.1E-18 T 14-10-2018 IPR016047 Peptidase M23 PhaeoP54_01047 22a60e58507b5f32f2bf35dd6920ff69 408 SUPERFAMILY SSF54106 76 118 3.27E-5 T 14-10-2018 PhaeoP54_01047 22a60e58507b5f32f2bf35dd6920ff69 408 Pfam PF01476 LysM domain 78 115 3.4E-4 T 14-10-2018 IPR018392 LysM domain PhaeoP54_01047 22a60e58507b5f32f2bf35dd6920ff69 408 Pfam PF01476 LysM domain 181 224 2.9E-9 T 14-10-2018 IPR018392 LysM domain PhaeoP54_01047 22a60e58507b5f32f2bf35dd6920ff69 408 SMART SM00257 74 118 0.094 T 14-10-2018 IPR018392 LysM domain PhaeoP54_01047 22a60e58507b5f32f2bf35dd6920ff69 408 SMART SM00257 180 224 6.1E-9 T 14-10-2018 IPR018392 LysM domain PhaeoP54_01047 22a60e58507b5f32f2bf35dd6920ff69 408 SUPERFAMILY SSF54106 179 224 4.84E-9 T 14-10-2018 PhaeoP54_03971 53a02c45410301e38f55f0e81f2f7290 303 Pfam PF03466 LysR substrate binding domain 88 287 2.7E-46 T 14-10-2018 IPR005119 LysR, substrate-binding PhaeoP54_03971 53a02c45410301e38f55f0e81f2f7290 303 Gene3D G3DSA:1.10.10.10 3 89 3.3E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_03971 53a02c45410301e38f55f0e81f2f7290 303 Gene3D G3DSA:3.40.190.10 91 285 7.5E-67 T 14-10-2018 PhaeoP54_03971 53a02c45410301e38f55f0e81f2f7290 303 Gene3D G3DSA:3.40.190.10 163 259 7.5E-67 T 14-10-2018 PhaeoP54_03971 53a02c45410301e38f55f0e81f2f7290 303 SUPERFAMILY SSF53850 89 289 2.53E-47 T 14-10-2018 PhaeoP54_03971 53a02c45410301e38f55f0e81f2f7290 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 63 9.1E-17 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PhaeoP54_03971 53a02c45410301e38f55f0e81f2f7290 303 SUPERFAMILY SSF46785 3 88 2.72E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_03925 3f63d1372dd1baa62278336fee9cf143 337 Gene3D G3DSA:1.10.3470.10 17 334 4.5E-59 T 14-10-2018 IPR037294 ABC transporter, BtuC-like PhaeoP54_03925 3f63d1372dd1baa62278336fee9cf143 337 Pfam PF01032 FecCD transport family 30 332 5.4E-59 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 PhaeoP54_03925 3f63d1372dd1baa62278336fee9cf143 337 SUPERFAMILY SSF81345 23 333 9.68E-59 T 14-10-2018 IPR037294 ABC transporter, BtuC-like PhaeoP54_03502 573eacc18d03fe58e3cd029bc47fd8eb 561 PRINTS PR01009 Flagellar M-ring protein signature 112 130 3.2E-20 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 PhaeoP54_03502 573eacc18d03fe58e3cd029bc47fd8eb 561 PRINTS PR01009 Flagellar M-ring protein signature 144 158 3.2E-20 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 PhaeoP54_03502 573eacc18d03fe58e3cd029bc47fd8eb 561 PRINTS PR01009 Flagellar M-ring protein signature 320 344 3.2E-20 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 PhaeoP54_03502 573eacc18d03fe58e3cd029bc47fd8eb 561 PRINTS PR01009 Flagellar M-ring protein signature 185 203 3.2E-20 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 PhaeoP54_03502 573eacc18d03fe58e3cd029bc47fd8eb 561 PRINTS PR01009 Flagellar M-ring protein signature 249 267 3.2E-20 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 PhaeoP54_03502 573eacc18d03fe58e3cd029bc47fd8eb 561 Pfam PF01514 Secretory protein of YscJ/FliF family 23 208 1.2E-49 T 14-10-2018 IPR006182 Secretory protein YscJ/FliF PhaeoP54_03502 573eacc18d03fe58e3cd029bc47fd8eb 561 Pfam PF08345 Flagellar M-ring protein C-terminal 239 395 3.3E-32 T 14-10-2018 IPR013556 Flagellar M-ring C-terminal PhaeoP54_03502 573eacc18d03fe58e3cd029bc47fd8eb 561 PIRSF PIRSF004862 1 559 4.4E-117 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 PhaeoP54_03502 573eacc18d03fe58e3cd029bc47fd8eb 561 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 4 446 1.4E-50 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 PhaeoP54_03502 573eacc18d03fe58e3cd029bc47fd8eb 561 Gene3D G3DSA:3.30.300.30 116 211 6.6E-7 T 14-10-2018 PhaeoP54_02532 1be9515296b7babbda08ea4d77ee945a 141 TIGRFAM TIGR01068 thioredoxin: thioredoxin 47 138 3.9E-29 T 14-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 PhaeoP54_02532 1be9515296b7babbda08ea4d77ee945a 141 PRINTS PR00421 Thioredoxin family signature 107 118 2.4E-7 T 14-10-2018 PhaeoP54_02532 1be9515296b7babbda08ea4d77ee945a 141 PRINTS PR00421 Thioredoxin family signature 67 76 2.4E-7 T 14-10-2018 PhaeoP54_02532 1be9515296b7babbda08ea4d77ee945a 141 PRINTS PR00421 Thioredoxin family signature 59 67 2.4E-7 T 14-10-2018 PhaeoP54_02532 1be9515296b7babbda08ea4d77ee945a 141 ProSitePatterns PS00194 Thioredoxin family active site. 60 78 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 PhaeoP54_02532 1be9515296b7babbda08ea4d77ee945a 141 Gene3D G3DSA:2.20.28.140 3 37 2.5E-16 T 14-10-2018 PhaeoP54_02532 1be9515296b7babbda08ea4d77ee945a 141 Pfam PF00085 Thioredoxin 45 139 6.4E-26 T 14-10-2018 IPR013766 Thioredoxin domain GO:0045454 PhaeoP54_02532 1be9515296b7babbda08ea4d77ee945a 141 Gene3D G3DSA:3.40.30.10 38 141 5.2E-28 T 14-10-2018 PhaeoP54_02532 1be9515296b7babbda08ea4d77ee945a 141 SUPERFAMILY SSF52833 26 139 1.6E-31 T 14-10-2018 IPR036249 Thioredoxin-like superfamily PhaeoP54_02532 1be9515296b7babbda08ea4d77ee945a 141 PIRSF PIRSF000077 39 140 8.1E-28 T 14-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 PhaeoP54_01045 e1d30f7f24f2de9553c74820667ce19e 151 Pfam PF02502 Ribose/Galactose Isomerase 9 146 2.5E-54 T 14-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 PhaeoP54_01045 e1d30f7f24f2de9553c74820667ce19e 151 TIGRFAM TIGR00689 rpiB_lacA_lacB: sugar-phosphate isomerase, RpiB/LacA/LacB family 9 147 4.8E-51 T 14-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 PhaeoP54_01045 e1d30f7f24f2de9553c74820667ce19e 151 TIGRFAM TIGR01120 rpiB: ribose 5-phosphate isomerase B 8 147 6.4E-47 T 14-10-2018 IPR004785 Ribose 5-phosphate isomerase B GO:0004751|GO:0006098 PhaeoP54_01045 e1d30f7f24f2de9553c74820667ce19e 151 SUPERFAMILY SSF89623 5 148 2.09E-56 T 14-10-2018 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 PhaeoP54_01045 e1d30f7f24f2de9553c74820667ce19e 151 Gene3D G3DSA:3.40.1400.10 1 151 7.0E-55 T 14-10-2018 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 PhaeoP54_01045 e1d30f7f24f2de9553c74820667ce19e 151 PIRSF PIRSF005384 7 151 3.1E-56 T 14-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 PhaeoP54_04051 8bb502b7f28dfeabf3cfb5d3952cf999 435 Gene3D G3DSA:1.10.287.470 87 162 3.1E-7 T 14-10-2018 PhaeoP54_04051 8bb502b7f28dfeabf3cfb5d3952cf999 435 Gene3D G3DSA:2.40.50.100 54 187 3.1E-7 T 14-10-2018 PhaeoP54_04051 8bb502b7f28dfeabf3cfb5d3952cf999 435 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 22 45 2.3E-42 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 PhaeoP54_04051 8bb502b7f28dfeabf3cfb5d3952cf999 435 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 331 355 2.3E-42 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 PhaeoP54_04051 8bb502b7f28dfeabf3cfb5d3952cf999 435 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 414 434 2.3E-42 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 PhaeoP54_04051 8bb502b7f28dfeabf3cfb5d3952cf999 435 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 399 414 2.3E-42 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 PhaeoP54_04051 8bb502b7f28dfeabf3cfb5d3952cf999 435 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 355 378 2.3E-42 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 PhaeoP54_04051 8bb502b7f28dfeabf3cfb5d3952cf999 435 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 64 84 2.3E-42 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 PhaeoP54_04051 8bb502b7f28dfeabf3cfb5d3952cf999 435 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 298 319 2.3E-42 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 PhaeoP54_04051 8bb502b7f28dfeabf3cfb5d3952cf999 435 Gene3D G3DSA:2.40.30.170 40 53 3.1E-7 T 14-10-2018 PhaeoP54_04051 8bb502b7f28dfeabf3cfb5d3952cf999 435 Pfam PF13437 HlyD family secretion protein 286 389 6.8E-14 T 14-10-2018 PhaeoP54_04051 8bb502b7f28dfeabf3cfb5d3952cf999 435 Gene3D G3DSA:2.40.30.170 299 416 2.9E-9 T 14-10-2018 PhaeoP54_04051 8bb502b7f28dfeabf3cfb5d3952cf999 435 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 17 434 6.0E-96 T 14-10-2018 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 PhaeoP54_01737 1cc2d3ffe8b924ce8b14144a62c6f2af 1225 Pfam PF13502 AsmA-like C-terminal region 997 1172 3.6E-11 T 14-10-2018 IPR032712 AsmA-like, C-terminal PhaeoP54_01737 1cc2d3ffe8b924ce8b14144a62c6f2af 1225 Pfam PF13116 Protein of unknown function 537 704 3.1E-11 T 14-10-2018 IPR025263 Domain of unknown function DUF3971 PhaeoP54_01520 c8ba18d62324f610714ad2f3298ce33c 217 SUPERFAMILY SSF53474 3 212 8.79E-53 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold PhaeoP54_01520 c8ba18d62324f610714ad2f3298ce33c 217 Pfam PF02129 X-Pro dipeptidyl-peptidase (S15 family) 17 138 1.4E-8 T 14-10-2018 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain GO:0016787 PhaeoP54_01520 c8ba18d62324f610714ad2f3298ce33c 217 Gene3D G3DSA:3.40.50.1820 2 217 2.7E-66 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold PhaeoP54_00064 69fa552df43ffc879e0a4a30601febd1 285 Hamap MF_00158 Pantothenate synthetase [panC]. 4 280 37.114 T 14-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 PhaeoP54_00064 69fa552df43ffc879e0a4a30601febd1 285 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 29 87 2.6E-8 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 PhaeoP54_00064 69fa552df43ffc879e0a4a30601febd1 285 Gene3D G3DSA:3.40.50.620 2 178 9.3E-70 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PhaeoP54_00064 69fa552df43ffc879e0a4a30601febd1 285 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 5 281 3.7E-81 T 14-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 PhaeoP54_00064 69fa552df43ffc879e0a4a30601febd1 285 Pfam PF02569 Pantoate-beta-alanine ligase 5 278 1.7E-92 T 14-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 PhaeoP54_00064 69fa552df43ffc879e0a4a30601febd1 285 SUPERFAMILY SSF52374 4 280 1.46E-99 T 14-10-2018 PhaeoP54_00064 69fa552df43ffc879e0a4a30601febd1 285 Gene3D G3DSA:3.30.1300.10 179 284 4.3E-24 T 14-10-2018 PhaeoP54_00082 fd1a3915628934cf610310b85aa0fd0c 675 SUPERFAMILY SSF53955 30 251 7.59E-62 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily PhaeoP54_00082 fd1a3915628934cf610310b85aa0fd0c 675 Gene3D G3DSA:3.40.710.10 239 571 4.0E-66 T 14-10-2018 PhaeoP54_00082 fd1a3915628934cf610310b85aa0fd0c 675 Pfam PF00912 Transglycosylase 52 217 1.6E-46 T 14-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 PhaeoP54_00082 fd1a3915628934cf610310b85aa0fd0c 675 SUPERFAMILY SSF56601 199 566 7.17E-87 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like PhaeoP54_00082 fd1a3915628934cf610310b85aa0fd0c 675 Pfam PF00905 Penicillin binding protein transpeptidase domain 294 504 9.7E-16 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 PhaeoP54_00082 fd1a3915628934cf610310b85aa0fd0c 675 Gene3D G3DSA:1.10.3810.10 48 238 1.6E-52 T 14-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 PhaeoP54_00082 fd1a3915628934cf610310b85aa0fd0c 675 Pfam PF06832 Penicillin-Binding Protein C-terminus Family 592 668 1.6E-10 T 14-10-2018 IPR009647 Penicillin-binding, C-terminal KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 PhaeoP54_00082 fd1a3915628934cf610310b85aa0fd0c 675 TIGRFAM TIGR02073 PBP_1c: penicillin-binding protein 1C 30 559 6.3E-192 T 14-10-2018 IPR011815 Penicillin-binding protein 1C GO:0008955|GO:0009252 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 PhaeoP54_04081 c02dbfe7dfe4a3608f892f693cdaea54 585 ProSitePatterns PS00211 ABC transporters family signature. 460 474 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PhaeoP54_04081 c02dbfe7dfe4a3608f892f693cdaea54 585 SMART SM00382 348 535 1.3E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_04081 c02dbfe7dfe4a3608f892f693cdaea54 585 Pfam PF00664 ABC transporter transmembrane region 17 270 3.9E-9 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 PhaeoP54_04081 c02dbfe7dfe4a3608f892f693cdaea54 585 TIGRFAM TIGR01842 type_I_sec_PrtD: type I secretion system ATPase 11 547 1.0E-178 T 14-10-2018 IPR010128 ATPase, type I secretion system, PrtD GO:0005524|GO:0008565|GO:0016021|GO:0030253|GO:0030256 PhaeoP54_04081 c02dbfe7dfe4a3608f892f693cdaea54 585 SUPERFAMILY SSF90123 5 307 3.14E-36 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 PhaeoP54_04081 c02dbfe7dfe4a3608f892f693cdaea54 585 Gene3D G3DSA:3.40.50.300 317 558 9.4E-65 T 14-10-2018 PhaeoP54_04081 c02dbfe7dfe4a3608f892f693cdaea54 585 Gene3D G3DSA:1.20.1560.10 2 309 3.3E-26 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 PhaeoP54_04081 c02dbfe7dfe4a3608f892f693cdaea54 585 SUPERFAMILY SSF52540 311 547 1.04E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_04081 c02dbfe7dfe4a3608f892f693cdaea54 585 Pfam PF00005 ABC transporter 341 487 8.0E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PhaeoP54_01503 5576f4c39ece4ad5200d3f04a22992cc 223 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 8 221 3.3E-46 T 14-10-2018 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 PhaeoP54_01503 5576f4c39ece4ad5200d3f04a22992cc 223 Gene3D G3DSA:3.40.50.1360 2 223 1.8E-53 T 14-10-2018 PhaeoP54_01503 5576f4c39ece4ad5200d3f04a22992cc 223 TIGRFAM TIGR01198 pgl: 6-phosphogluconolactonase 6 221 2.8E-42 T 14-10-2018 IPR005900 6-phosphogluconolactonase, DevB-type GO:0005975|GO:0006098|GO:0017057 KEGG: 00030+3.1.1.31 PhaeoP54_01503 5576f4c39ece4ad5200d3f04a22992cc 223 SUPERFAMILY SSF100950 1 221 4.69E-50 T 14-10-2018 IPR037171 NagB/RpiA transferase-like PhaeoP54_03346 fb8f72b3c4a2fa6ad893b5d2108f3fe5 142 Gene3D G3DSA:2.20.25.10 2 45 5.6E-15 T 14-10-2018 PhaeoP54_03346 fb8f72b3c4a2fa6ad893b5d2108f3fe5 142 SUPERFAMILY SSF82784 4 141 5.76E-38 T 14-10-2018 IPR036102 OsmC/Ohr superfamily PhaeoP54_03346 fb8f72b3c4a2fa6ad893b5d2108f3fe5 142 Gene3D G3DSA:3.30.300.20 46 142 8.1E-30 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta PhaeoP54_03346 fb8f72b3c4a2fa6ad893b5d2108f3fe5 142 Pfam PF02566 OsmC-like protein 40 140 8.4E-15 T 14-10-2018 IPR003718 OsmC/Ohr family PhaeoP54_03346 fb8f72b3c4a2fa6ad893b5d2108f3fe5 142 TIGRFAM TIGR03561 organ_hyd_perox: peroxiredoxin, Ohr subfamily 6 140 2.7E-50 T 14-10-2018 IPR019953 Organic hydroperoxide resistance protein famiy GO:0006979 PhaeoP54_03067 b1294009ebf024b17d2907d4a3730464 233 Pfam PF08239 Bacterial SH3 domain 176 229 2.6E-11 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type PhaeoP54_03067 b1294009ebf024b17d2907d4a3730464 233 SMART SM00287 167 232 8.5E-9 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type PhaeoP54_03067 b1294009ebf024b17d2907d4a3730464 233 Gene3D G3DSA:2.30.30.40 161 232 1.6E-14 T 14-10-2018 PhaeoP54_00131 27e73f2c66c6c178db5747cfa6ecc06c 424 Gene3D G3DSA:3.40.1480.10 258 418 2.8E-117 T 14-10-2018 IPR037035 Glycerate kinase-like, C-terminal domain superfamily PhaeoP54_00131 27e73f2c66c6c178db5747cfa6ecc06c 424 Pfam PF05161 MOFRL family 309 415 3.8E-34 T 14-10-2018 IPR007835 MOFRL domain Reactome: R-HSA-70350 PhaeoP54_00131 27e73f2c66c6c178db5747cfa6ecc06c 424 Pfam PF13660 Domain of unknown function (DUF4147) 8 235 6.2E-64 T 14-10-2018 IPR025286 MOFRL-associated domain Reactome: R-HSA-70350 PhaeoP54_00131 27e73f2c66c6c178db5747cfa6ecc06c 424 Gene3D G3DSA:3.40.50.10180 40 257 2.8E-117 T 14-10-2018 IPR038614 Glycerate kinase, N-terminal domain superfamily Reactome: R-HSA-70350 PhaeoP54_00131 27e73f2c66c6c178db5747cfa6ecc06c 424 SUPERFAMILY SSF82544 1 421 2.09E-115 T 14-10-2018 PhaeoP54_02736 1d06fa0f0564b70a80b42079c32e8ea2 255 ProSitePatterns PS00211 ABC transporters family signature. 130 144 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PhaeoP54_02736 1d06fa0f0564b70a80b42079c32e8ea2 255 Gene3D G3DSA:3.40.50.300 3 250 3.2E-59 T 14-10-2018 PhaeoP54_02736 1d06fa0f0564b70a80b42079c32e8ea2 255 SMART SM00382 27 217 5.7E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_02736 1d06fa0f0564b70a80b42079c32e8ea2 255 Pfam PF00005 ABC transporter 18 157 2.6E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PhaeoP54_02736 1d06fa0f0564b70a80b42079c32e8ea2 255 SUPERFAMILY SSF52540 3 210 4.78E-62 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_02276 cafe9824897126d0e34fe64610f98820 369 Gene3D G3DSA:3.40.640.10 46 268 5.5E-118 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PhaeoP54_02276 cafe9824897126d0e34fe64610f98820 369 Pfam PF00155 Aminotransferase class I and II 36 359 7.9E-40 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 PhaeoP54_02276 cafe9824897126d0e34fe64610f98820 369 SUPERFAMILY SSF53383 34 359 1.2E-72 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PhaeoP54_02276 cafe9824897126d0e34fe64610f98820 369 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 220 229 - T 14-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 PhaeoP54_02276 cafe9824897126d0e34fe64610f98820 369 Gene3D G3DSA:3.90.1150.10 25 355 5.5E-118 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 PhaeoP54_03131 8caec69955af70613589c10e45a65613 175 SUPERFAMILY SSF55826 14 175 7.59E-38 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 PhaeoP54_03131 8caec69955af70613589c10e45a65613 175 Pfam PF04073 Aminoacyl-tRNA editing domain 42 161 7.7E-22 T 14-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 PhaeoP54_03131 8caec69955af70613589c10e45a65613 175 Gene3D G3DSA:3.90.960.10 6 175 2.2E-40 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 PhaeoP54_03371 506f9fdbf3dd0cc32d17ff911041eee8 406 Pfam PF02803 Thiolase, C-terminal domain 283 405 1.1E-45 T 14-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 PhaeoP54_03371 506f9fdbf3dd0cc32d17ff911041eee8 406 PIRSF PIRSF000429 13 406 8.6E-123 T 14-10-2018 IPR002155 Thiolase GO:0016747 PhaeoP54_03371 506f9fdbf3dd0cc32d17ff911041eee8 406 ProSitePatterns PS00099 Thiolases active site. 387 400 - T 14-10-2018 IPR020610 Thiolase, active site GO:0016747 PhaeoP54_03371 506f9fdbf3dd0cc32d17ff911041eee8 406 ProSitePatterns PS00737 Thiolases signature 2. 352 368 - T 14-10-2018 IPR020613 Thiolase, conserved site GO:0016747 PhaeoP54_03371 506f9fdbf3dd0cc32d17ff911041eee8 406 Pfam PF00108 Thiolase, N-terminal domain 19 275 8.2E-79 T 14-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 PhaeoP54_03371 506f9fdbf3dd0cc32d17ff911041eee8 406 Gene3D G3DSA:3.40.47.10 21 289 8.6E-141 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 PhaeoP54_03371 506f9fdbf3dd0cc32d17ff911041eee8 406 SUPERFAMILY SSF53901 18 283 1.03E-76 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 PhaeoP54_03371 506f9fdbf3dd0cc32d17ff911041eee8 406 SUPERFAMILY SSF53901 284 405 1.84E-43 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 PhaeoP54_03371 506f9fdbf3dd0cc32d17ff911041eee8 406 Gene3D G3DSA:3.40.47.10 142 402 8.6E-141 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 PhaeoP54_03371 506f9fdbf3dd0cc32d17ff911041eee8 406 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 21 404 2.8E-132 T 14-10-2018 IPR002155 Thiolase GO:0016747 PhaeoP54_02506 f1cd139f1e6f9c156a358083427f0042 107 Pfam PF03992 Antibiotic biosynthesis monooxygenase 13 79 1.8E-10 T 14-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain PhaeoP54_02506 f1cd139f1e6f9c156a358083427f0042 107 SUPERFAMILY SSF54909 7 80 4.22E-17 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel PhaeoP54_02506 f1cd139f1e6f9c156a358083427f0042 107 Gene3D G3DSA:3.30.70.100 8 106 7.6E-31 T 14-10-2018 PhaeoP54_01400 bc88f5c4193fcc2ad63945e157d1328c 290 SUPERFAMILY SSF52540 9 224 1.02E-9 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_01400 bc88f5c4193fcc2ad63945e157d1328c 290 SUPERFAMILY SSF52540 16 153 2.2E-17 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_01400 bc88f5c4193fcc2ad63945e157d1328c 290 Gene3D G3DSA:1.10.20.140 118 182 1.1E-66 T 14-10-2018 PhaeoP54_01400 bc88f5c4193fcc2ad63945e157d1328c 290 Pfam PF01715 IPP transferase 48 281 7.2E-53 T 14-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 PhaeoP54_01400 bc88f5c4193fcc2ad63945e157d1328c 290 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 16 282 1.9E-53 T 14-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 PhaeoP54_01400 bc88f5c4193fcc2ad63945e157d1328c 290 Gene3D G3DSA:3.40.50.300 19 280 1.1E-66 T 14-10-2018 PhaeoP54_01400 bc88f5c4193fcc2ad63945e157d1328c 290 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 15 282 21.826 T 14-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 PhaeoP54_02520 340dddde86f5275d49f474082eeff96d 547 Hamap MF_00177 Lysine--tRNA ligase [lysS]. 12 542 29.788 T 14-10-2018 IPR002904 Lysine-tRNA ligase GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 PhaeoP54_02520 340dddde86f5275d49f474082eeff96d 547 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 44 53 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 PhaeoP54_02520 340dddde86f5275d49f474082eeff96d 547 SUPERFAMILY SSF52374 13 330 1.03E-55 T 14-10-2018 PhaeoP54_02520 340dddde86f5275d49f474082eeff96d 547 Gene3D G3DSA:2.30.30.300 183 228 1.2E-72 T 14-10-2018 IPR023386 Lysine-tRNA ligase, insertion domain superfamily GO:0004824 KEGG: 00970+6.1.1.6 PhaeoP54_02520 340dddde86f5275d49f474082eeff96d 547 Gene3D G3DSA:1.10.10.350 463 540 4.2E-14 T 14-10-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 PhaeoP54_02520 340dddde86f5275d49f474082eeff96d 547 SUPERFAMILY SSF48163 329 542 2.09E-41 T 14-10-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 PhaeoP54_02520 340dddde86f5275d49f474082eeff96d 547 Pfam PF01921 tRNA synthetases class I (K) 12 364 1.0E-129 T 14-10-2018 IPR002904 Lysine-tRNA ligase GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 PhaeoP54_02520 340dddde86f5275d49f474082eeff96d 547 TIGRFAM TIGR00467 lysS_arch: lysine--tRNA ligase 39 540 1.8E-52 T 14-10-2018 IPR002904 Lysine-tRNA ligase GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 PhaeoP54_02520 340dddde86f5275d49f474082eeff96d 547 Gene3D G3DSA:3.40.50.620 22 281 1.2E-72 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PhaeoP54_02978 55c22e673cb0620339293e374432a7ac 44 ProSitePatterns PS00784 Ribosomal protein L34 signature. 2 21 - T 14-10-2018 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 PhaeoP54_02978 55c22e673cb0620339293e374432a7ac 44 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 1 42 3.0E-16 T 14-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PhaeoP54_02978 55c22e673cb0620339293e374432a7ac 44 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 1 44 5.4E-25 T 14-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PhaeoP54_02978 55c22e673cb0620339293e374432a7ac 44 Pfam PF00468 Ribosomal protein L34 1 44 2.0E-24 T 14-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PhaeoP54_02978 55c22e673cb0620339293e374432a7ac 44 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 1 44 16.09 T 14-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PhaeoP54_02247 64140363a075369ffeb04edef4b07844 457 Pfam PF03315 Serine dehydratase beta chain 4 155 1.9E-47 T 14-10-2018 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 PhaeoP54_02247 64140363a075369ffeb04edef4b07844 457 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 4 454 8.4E-179 T 14-10-2018 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 PhaeoP54_02247 64140363a075369ffeb04edef4b07844 457 Pfam PF03313 Serine dehydratase alpha chain 203 451 8.8E-93 T 14-10-2018 IPR005130 Serine dehydratase-like, alpha subunit PhaeoP54_02247 64140363a075369ffeb04edef4b07844 457 Gene3D G3DSA:3.30.1330.90 11 159 2.6E-44 T 14-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 PhaeoP54_02247 64140363a075369ffeb04edef4b07844 457 SUPERFAMILY SSF143548 17 157 2.62E-41 T 14-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 PhaeoP54_02453 27a41bf8b1fd4a10577a1bb606eb6504 577 Gene3D G3DSA:3.40.50.12780 32 476 1.8E-94 T 14-10-2018 PhaeoP54_02453 27a41bf8b1fd4a10577a1bb606eb6504 577 Pfam PF00501 AMP-binding enzyme 51 485 6.8E-88 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 PhaeoP54_02453 27a41bf8b1fd4a10577a1bb606eb6504 577 SUPERFAMILY SSF56801 36 576 8.11E-128 T 14-10-2018 PhaeoP54_02453 27a41bf8b1fd4a10577a1bb606eb6504 577 Pfam PF13193 AMP-binding enzyme C-terminal domain 494 568 3.2E-18 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain PhaeoP54_02453 27a41bf8b1fd4a10577a1bb606eb6504 577 Gene3D G3DSA:3.30.300.310 481 577 4.4E-29 T 14-10-2018 PhaeoP54_02453 27a41bf8b1fd4a10577a1bb606eb6504 577 ProSitePatterns PS00455 Putative AMP-binding domain signature. 235 246 - T 14-10-2018 IPR020845 AMP-binding, conserved site PhaeoP54_02197 21427ac3dac3086b98776cf6d967f59c 349 Gene3D G3DSA:3.40.50.880 29 224 6.1E-27 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like PhaeoP54_02197 21427ac3dac3086b98776cf6d967f59c 349 Gene3D G3DSA:1.10.10.60 233 341 4.8E-27 T 14-10-2018 PhaeoP54_02197 21427ac3dac3086b98776cf6d967f59c 349 SMART SM00342 254 337 4.3E-24 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PhaeoP54_02197 21427ac3dac3086b98776cf6d967f59c 349 SUPERFAMILY SSF46689 290 340 8.51E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PhaeoP54_02197 21427ac3dac3086b98776cf6d967f59c 349 SUPERFAMILY SSF46689 239 289 2.51E-6 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PhaeoP54_02197 21427ac3dac3086b98776cf6d967f59c 349 Pfam PF01965 DJ-1/PfpI family 32 198 8.0E-9 T 14-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 PhaeoP54_02197 21427ac3dac3086b98776cf6d967f59c 349 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 291 333 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 PhaeoP54_02197 21427ac3dac3086b98776cf6d967f59c 349 Pfam PF12833 Helix-turn-helix domain 262 338 4.8E-22 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PhaeoP54_02197 21427ac3dac3086b98776cf6d967f59c 349 SUPERFAMILY SSF52317 32 216 1.71E-25 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like PhaeoP54_00429 a761e47bcade7b7fe9cbbbd0d92fc753 262 Pfam PF12697 Alpha/beta hydrolase family 24 250 1.5E-15 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 PhaeoP54_00429 a761e47bcade7b7fe9cbbbd0d92fc753 262 PRINTS PR00111 Alpha/beta hydrolase fold signature 91 104 2.4E-5 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 PhaeoP54_00429 a761e47bcade7b7fe9cbbbd0d92fc753 262 PRINTS PR00111 Alpha/beta hydrolase fold signature 202 216 2.4E-5 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 PhaeoP54_00429 a761e47bcade7b7fe9cbbbd0d92fc753 262 PRINTS PR00111 Alpha/beta hydrolase fold signature 47 62 2.4E-5 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 PhaeoP54_00429 a761e47bcade7b7fe9cbbbd0d92fc753 262 TIGRFAM TIGR02427 protocat_pcaD: 3-oxoadipate enol-lactonase 10 257 6.2E-94 T 14-10-2018 IPR026968 3-oxoadipate enol-lactonase 1/2 GO:0042952|GO:0047570 KEGG: 00362+3.1.1.24|MetaCyc: PWY-6185 PhaeoP54_00429 a761e47bcade7b7fe9cbbbd0d92fc753 262 Gene3D G3DSA:3.40.50.1820 1 259 4.3E-61 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold PhaeoP54_00429 a761e47bcade7b7fe9cbbbd0d92fc753 262 SUPERFAMILY SSF53474 1 257 2.05E-61 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold PhaeoP54_00938 bb4cc91defa5ffab906c537c1a0c525a 444 Gene3D G3DSA:3.30.420.40 27 404 7.9E-82 T 14-10-2018 PhaeoP54_00938 bb4cc91defa5ffab906c537c1a0c525a 444 PIRSF PIRSF003101 11 444 5.4E-107 T 14-10-2018 IPR020823 Cell division protein FtsA PhaeoP54_00938 bb4cc91defa5ffab906c537c1a0c525a 444 SUPERFAMILY SSF53067 228 409 7.92E-40 T 14-10-2018 PhaeoP54_00938 bb4cc91defa5ffab906c537c1a0c525a 444 Pfam PF14450 Cell division protein FtsA 25 223 9.7E-8 T 14-10-2018 PhaeoP54_00938 bb4cc91defa5ffab906c537c1a0c525a 444 Gene3D G3DSA:3.90.640.10 264 332 7.9E-82 T 14-10-2018 PhaeoP54_00938 bb4cc91defa5ffab906c537c1a0c525a 444 SMART SM00842 24 225 1.9E-76 T 14-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 PhaeoP54_00938 bb4cc91defa5ffab906c537c1a0c525a 444 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 25 408 8.2E-94 T 14-10-2018 IPR020823 Cell division protein FtsA PhaeoP54_00938 bb4cc91defa5ffab906c537c1a0c525a 444 Gene3D G3DSA:3.30.420.40 226 384 7.9E-82 T 14-10-2018 PhaeoP54_00938 bb4cc91defa5ffab906c537c1a0c525a 444 SUPERFAMILY SSF53067 24 226 2.16E-40 T 14-10-2018 PhaeoP54_00938 bb4cc91defa5ffab906c537c1a0c525a 444 Gene3D G3DSA:3.30.1490.110 116 198 7.9E-82 T 14-10-2018 PhaeoP54_00938 bb4cc91defa5ffab906c537c1a0c525a 444 Pfam PF14450 Cell division protein FtsA 236 406 3.7E-19 T 14-10-2018 PhaeoP54_00938 bb4cc91defa5ffab906c537c1a0c525a 444 Hamap MF_02033 Cell division protein FtsA [ftsA]. 20 444 24.775 T 14-10-2018 IPR020823 Cell division protein FtsA PhaeoP54_00938 bb4cc91defa5ffab906c537c1a0c525a 444 Pfam PF02491 SHS2 domain inserted in FTSA 114 191 3.9E-17 T 14-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 PhaeoP54_01482 6934f7d131fdd660590b22a6f89838be 207 SUPERFAMILY SSF51182 95 204 2.06E-23 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily PhaeoP54_01482 6934f7d131fdd660590b22a6f89838be 207 SMART SM00530 30 85 2.3E-14 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PhaeoP54_01482 6934f7d131fdd660590b22a6f89838be 207 Pfam PF07883 Cupin domain 145 203 2.2E-11 T 14-10-2018 IPR013096 Cupin 2, conserved barrel PhaeoP54_01482 6934f7d131fdd660590b22a6f89838be 207 Gene3D G3DSA:1.10.260.40 26 98 5.0E-18 T 14-10-2018 PhaeoP54_01482 6934f7d131fdd660590b22a6f89838be 207 SUPERFAMILY SSF47413 25 89 1.26E-16 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 PhaeoP54_01482 6934f7d131fdd660590b22a6f89838be 207 Gene3D G3DSA:2.60.120.10 99 204 3.7E-24 T 14-10-2018 IPR014710 RmlC-like jelly roll fold PhaeoP54_01482 6934f7d131fdd660590b22a6f89838be 207 Pfam PF13560 Helix-turn-helix domain 26 82 2.1E-13 T 14-10-2018 PhaeoP54_03115 09fc9085bf969344b956344d046cc22e 390 SUPERFAMILY SSF53955 10 319 1.2E-88 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily PhaeoP54_03115 09fc9085bf969344b956344d046cc22e 390 SUPERFAMILY SSF47090 324 390 1.18E-13 T 14-10-2018 IPR036365 PGBD-like superfamily PhaeoP54_03115 09fc9085bf969344b956344d046cc22e 390 Gene3D G3DSA:1.10.101.10 322 390 1.1E-9 T 14-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 PhaeoP54_03115 09fc9085bf969344b956344d046cc22e 390 TIGRFAM TIGR02283 MltB_2: lytic murein transglycosylase 26 319 4.2E-98 T 14-10-2018 IPR011970 Lytic murein transglycosylase PhaeoP54_03115 09fc9085bf969344b956344d046cc22e 390 Gene3D G3DSA:1.10.8.350 40 201 8.1E-66 T 14-10-2018 PhaeoP54_03115 09fc9085bf969344b956344d046cc22e 390 Gene3D G3DSA:1.10.530.10 68 315 8.1E-66 T 14-10-2018 PhaeoP54_03115 09fc9085bf969344b956344d046cc22e 390 Pfam PF13406 Transglycosylase SLT domain 26 315 4.1E-86 T 14-10-2018 IPR031304 Transglycosylase SLT domain 2 PhaeoP54_03115 09fc9085bf969344b956344d046cc22e 390 Pfam PF01471 Putative peptidoglycan binding domain 337 389 6.0E-10 T 14-10-2018 IPR002477 Peptidoglycan binding-like PhaeoP54_00084 cde3a567d183e9dd7ee69471bc645e92 972 Gene3D G3DSA:3.40.50.12140 728 954 7.9E-76 T 14-10-2018 PhaeoP54_00084 cde3a567d183e9dd7ee69471bc645e92 972 Gene3D G3DSA:3.40.50.880 366 540 7.7E-10 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like PhaeoP54_00084 cde3a567d183e9dd7ee69471bc645e92 972 Pfam PF13709 Domain of unknown function (DUF4159) 733 952 3.9E-58 T 14-10-2018 IPR025297 Domain of unknown function DUF4159 PhaeoP54_00084 cde3a567d183e9dd7ee69471bc645e92 972 Pfam PF07584 Aerotolerance regulator N-terminal 8 81 9.6E-17 T 14-10-2018 IPR024163 Aerotolerance regulator, N-terminal PhaeoP54_00084 cde3a567d183e9dd7ee69471bc645e92 972 TIGRFAM TIGR02226 two_anch: N-terminal double-transmembrane domain 9 86 7.7E-14 T 14-10-2018 IPR011933 Double transmembrane domain PhaeoP54_00084 cde3a567d183e9dd7ee69471bc645e92 972 SUPERFAMILY SSF52317 377 536 1.37E-10 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like PhaeoP54_01298 151bce5e821db3cd8e0b29cb6c59caf8 334 Gene3D G3DSA:2.40.50.940 222 247 1.9E-10 T 14-10-2018 PhaeoP54_01298 151bce5e821db3cd8e0b29cb6c59caf8 334 SUPERFAMILY SSF52540 4 242 1.82E-84 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_01298 151bce5e821db3cd8e0b29cb6c59caf8 334 Pfam PF00005 ABC transporter 22 161 7.7E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PhaeoP54_01298 151bce5e821db3cd8e0b29cb6c59caf8 334 SUPERFAMILY SSF50331 236 332 3.64E-22 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal PhaeoP54_01298 151bce5e821db3cd8e0b29cb6c59caf8 334 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PhaeoP54_01298 151bce5e821db3cd8e0b29cb6c59caf8 334 Gene3D G3DSA:2.40.50.140 262 318 4.0E-10 T 14-10-2018 PhaeoP54_01298 151bce5e821db3cd8e0b29cb6c59caf8 334 Gene3D G3DSA:2.40.50.940 248 326 4.0E-10 T 14-10-2018 PhaeoP54_01298 151bce5e821db3cd8e0b29cb6c59caf8 334 Gene3D G3DSA:3.40.50.300 3 221 5.4E-64 T 14-10-2018 PhaeoP54_01298 151bce5e821db3cd8e0b29cb6c59caf8 334 SMART SM00382 28 211 2.2E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_01298 151bce5e821db3cd8e0b29cb6c59caf8 334 Pfam PF08402 TOBE domain 255 326 6.6E-9 T 14-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 PhaeoP54_03291 dad7944eda45fc5142ce53cae341d599 357 SUPERFAMILY SSF55811 231 355 2.64E-22 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 PhaeoP54_03291 dad7944eda45fc5142ce53cae341d599 357 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 14 282 3.4E-87 T 14-10-2018 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 PhaeoP54_03291 dad7944eda45fc5142ce53cae341d599 357 Gene3D G3DSA:1.10.340.30 25 145 1.9E-78 T 14-10-2018 PhaeoP54_03291 dad7944eda45fc5142ce53cae341d599 357 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 49 165 1.9E-14 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 PhaeoP54_03291 dad7944eda45fc5142ce53cae341d599 357 Gene3D G3DSA:1.10.1670.10 15 223 1.9E-78 T 14-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 PhaeoP54_03291 dad7944eda45fc5142ce53cae341d599 357 SMART SM00478 52 201 7.9E-44 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 PhaeoP54_03291 dad7944eda45fc5142ce53cae341d599 357 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 203 219 - T 14-10-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 PhaeoP54_03291 dad7944eda45fc5142ce53cae341d599 357 Pfam PF00633 Helix-hairpin-helix motif 113 138 2.3E-6 T 14-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 PhaeoP54_03291 dad7944eda45fc5142ce53cae341d599 357 Gene3D G3DSA:3.90.79.10 233 357 9.8E-15 T 14-10-2018 PhaeoP54_03291 dad7944eda45fc5142ce53cae341d599 357 Pfam PF14815 NUDIX domain 246 352 7.1E-20 T 14-10-2018 IPR029119 MutY, C-terminal Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 PhaeoP54_03291 dad7944eda45fc5142ce53cae341d599 357 SUPERFAMILY SSF48150 11 236 2.67E-68 T 14-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 PhaeoP54_03291 dad7944eda45fc5142ce53cae341d599 357 ProSitePatterns PS01155 Endonuclease III family signature. 115 142 - T 14-10-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 PhaeoP54_00407 3fdee9e381104d4b806fd1b35702a81b 380 Gene3D G3DSA:3.40.50.2000 205 358 1.4E-14 T 14-10-2018 PhaeoP54_00407 3fdee9e381104d4b806fd1b35702a81b 380 Gene3D G3DSA:3.40.50.2000 5 118 1.2E-6 T 14-10-2018 PhaeoP54_00407 3fdee9e381104d4b806fd1b35702a81b 380 SUPERFAMILY SSF53756 1 354 5.34E-21 T 14-10-2018 PhaeoP54_00407 3fdee9e381104d4b806fd1b35702a81b 380 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 217 355 5.2E-7 T 14-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 PhaeoP54_00011 a6ad94ab5335fccb9ac0f42db193cd3a 112 TIGRFAM TIGR02222 chap_CsaA: export-related chaperone protein CsaA 8 111 2.9E-39 T 14-10-2018 IPR008231 Probable chaperone CsaA PhaeoP54_00011 a6ad94ab5335fccb9ac0f42db193cd3a 112 Pfam PF01588 Putative tRNA binding domain 16 109 9.8E-13 T 14-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 PhaeoP54_00011 a6ad94ab5335fccb9ac0f42db193cd3a 112 Gene3D G3DSA:2.40.50.140 1 112 4.8E-26 T 14-10-2018 PhaeoP54_00011 a6ad94ab5335fccb9ac0f42db193cd3a 112 SUPERFAMILY SSF50249 6 111 7.43E-26 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold PhaeoP54_01808 19d18feef526a33ec105a5f5687598a2 468 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 15 95 2.2E-26 T 14-10-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 PhaeoP54_01808 19d18feef526a33ec105a5f5687598a2 468 SUPERFAMILY SSF54368 3 101 6.02E-33 T 14-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PhaeoP54_01808 19d18feef526a33ec105a5f5687598a2 468 ProSitePatterns PS00180 Glutamine synthetase signature 1. 50 68 - T 14-10-2018 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 PhaeoP54_01808 19d18feef526a33ec105a5f5687598a2 468 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 5 467 9.1E-197 T 14-10-2018 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PhaeoP54_01808 19d18feef526a33ec105a5f5687598a2 468 SUPERFAMILY SSF55931 102 467 6.67E-132 T 14-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 PhaeoP54_01808 19d18feef526a33ec105a5f5687598a2 468 Gene3D G3DSA:3.10.20.70 2 104 1.0E-35 T 14-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PhaeoP54_01808 19d18feef526a33ec105a5f5687598a2 468 Gene3D G3DSA:3.30.590.10 105 456 3.7E-138 T 14-10-2018 PhaeoP54_01808 19d18feef526a33ec105a5f5687598a2 468 SMART SM01230 102 378 1.3E-137 T 14-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PhaeoP54_01808 19d18feef526a33ec105a5f5687598a2 468 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 258 273 - T 14-10-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 PhaeoP54_01808 19d18feef526a33ec105a5f5687598a2 468 ProSitePatterns PS00182 Glutamine synthetase class-I adenylation site. 385 397 - T 14-10-2018 IPR001637 Glutamine synthetase class-I, adenylation site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PhaeoP54_01808 19d18feef526a33ec105a5f5687598a2 468 Pfam PF00120 Glutamine synthetase, catalytic domain 103 465 1.7E-132 T 14-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PhaeoP54_01866 cafa75818c98efc3115dd4a2b99c6193 334 PIRSF PIRSF000267 1 334 1.2E-95 T 14-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 PhaeoP54_01866 cafa75818c98efc3115dd4a2b99c6193 334 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 5 220 2.2E-50 T 14-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 PhaeoP54_01866 cafa75818c98efc3115dd4a2b99c6193 334 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 5 323 2.4E-101 T 14-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 PhaeoP54_02216 d6e44b99c1f6628b3e8331044eca7458 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 3.2E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_02216 d6e44b99c1f6628b3e8331044eca7458 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 3.2E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_02216 d6e44b99c1f6628b3e8331044eca7458 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 3.2E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_02216 d6e44b99c1f6628b3e8331044eca7458 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 1.3E-41 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_02216 d6e44b99c1f6628b3e8331044eca7458 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 220 240 1.3E-41 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_02216 d6e44b99c1f6628b3e8331044eca7458 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 13 30 1.3E-41 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_02216 d6e44b99c1f6628b3e8331044eca7458 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 1.3E-41 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_02216 d6e44b99c1f6628b3e8331044eca7458 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 1.3E-41 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_02216 d6e44b99c1f6628b3e8331044eca7458 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 1.3E-41 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_02216 d6e44b99c1f6628b3e8331044eca7458 257 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 12 186 4.5E-6 T 14-10-2018 PhaeoP54_02216 d6e44b99c1f6628b3e8331044eca7458 257 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 21 255 9.4E-57 T 14-10-2018 PhaeoP54_02216 d6e44b99c1f6628b3e8331044eca7458 257 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 PhaeoP54_02216 d6e44b99c1f6628b3e8331044eca7458 257 SUPERFAMILY SSF51735 7 256 9.15E-77 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PhaeoP54_02216 d6e44b99c1f6628b3e8331044eca7458 257 Gene3D G3DSA:3.40.50.720 2 257 3.7E-80 T 14-10-2018 PhaeoP54_02988 2d310697d47f413e9869a49c6865ac96 286 SUPERFAMILY SSF53633 5 286 1.7E-90 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily PhaeoP54_02988 2d310697d47f413e9869a49c6865ac96 286 Pfam PF00696 Amino acid kinase family 31 262 1.2E-47 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 PhaeoP54_02988 2d310697d47f413e9869a49c6865ac96 286 Hamap MF_00082 Acetylglutamate kinase [argB]. 29 279 47.433 T 14-10-2018 IPR037528 Acetylglutamate kinase ArgB GO:0003991|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 PhaeoP54_02988 2d310697d47f413e9869a49c6865ac96 286 TIGRFAM TIGR00761 argB: acetylglutamate kinase 32 261 1.6E-76 T 14-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 PhaeoP54_02988 2d310697d47f413e9869a49c6865ac96 286 PIRSF PIRSF000728 13 286 1.2E-105 T 14-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 PhaeoP54_02988 2d310697d47f413e9869a49c6865ac96 286 Gene3D G3DSA:3.40.1160.10 9 286 3.4E-91 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily PhaeoP54_02988 2d310697d47f413e9869a49c6865ac96 286 PRINTS PR00474 Glutamate 5-kinase family signature 61 75 1.2E-9 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 PhaeoP54_02988 2d310697d47f413e9869a49c6865ac96 286 PRINTS PR00474 Glutamate 5-kinase family signature 186 213 1.2E-9 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 PhaeoP54_02988 2d310697d47f413e9869a49c6865ac96 286 PRINTS PR00474 Glutamate 5-kinase family signature 236 256 1.2E-9 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 PhaeoP54_03862 12440827070e121c0f5333865dac33a6 384 Gene3D G3DSA:1.10.530.10 149 271 2.1E-31 T 14-10-2018 PhaeoP54_03862 12440827070e121c0f5333865dac33a6 384 SUPERFAMILY SSF53955 156 266 6.75E-35 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily PhaeoP54_03862 12440827070e121c0f5333865dac33a6 384 Pfam PF01464 Transglycosylase SLT domain 154 247 6.2E-20 T 14-10-2018 IPR008258 Transglycosylase SLT domain 1 PhaeoP54_03509 65564093141e27dc494a07013f149b60 692 Gene3D G3DSA:3.40.30.60 349 491 1.3E-35 T 14-10-2018 PhaeoP54_03509 65564093141e27dc494a07013f149b60 692 TIGRFAM TIGR01398 FlhA: flagellar biosynthesis protein FlhA 8 690 1.7E-251 T 14-10-2018 IPR006301 Flagellar biosynthesis protein FlhA GO:0016021|GO:0044780 PhaeoP54_03509 65564093141e27dc494a07013f149b60 692 Gene3D G3DSA:1.10.490.80 592 688 9.1E-6 T 14-10-2018 PhaeoP54_03509 65564093141e27dc494a07013f149b60 692 Pfam PF00771 FHIPEP family 18 679 1.0E-220 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 PhaeoP54_03509 65564093141e27dc494a07013f149b60 692 Gene3D G3DSA:1.10.8.540 500 588 4.1E-17 T 14-10-2018 PhaeoP54_03509 65564093141e27dc494a07013f149b60 692 PIRSF PIRSF005419 2 692 9.2E-193 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 PhaeoP54_03509 65564093141e27dc494a07013f149b60 692 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 25 38 1.3E-46 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 PhaeoP54_03509 65564093141e27dc494a07013f149b60 692 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 129 145 1.3E-46 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 PhaeoP54_03509 65564093141e27dc494a07013f149b60 692 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 62 81 1.3E-46 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 PhaeoP54_03509 65564093141e27dc494a07013f149b60 692 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 178 195 1.3E-46 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 PhaeoP54_03509 65564093141e27dc494a07013f149b60 692 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 148 166 1.3E-46 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 PhaeoP54_03509 65564093141e27dc494a07013f149b60 692 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 229 243 1.3E-46 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 PhaeoP54_02678 46d83817b70250b84ddc8a2d2b9c6000 267 Gene3D G3DSA:3.40.190.10 100 214 1.8E-81 T 14-10-2018 PhaeoP54_02678 46d83817b70250b84ddc8a2d2b9c6000 267 Pfam PF12849 PBP superfamily domain 24 245 6.2E-19 T 14-10-2018 IPR024370 PBP domain PhaeoP54_02678 46d83817b70250b84ddc8a2d2b9c6000 267 SUPERFAMILY SSF53850 23 253 1.33E-22 T 14-10-2018 PhaeoP54_02678 46d83817b70250b84ddc8a2d2b9c6000 267 Gene3D G3DSA:3.40.190.10 25 251 1.8E-81 T 14-10-2018 PhaeoP54_03628 f4a8827aed4e71abb9b521059105189b 227 Pfam PF02397 Bacterial sugar transferase 32 222 1.7E-55 T 14-10-2018 IPR003362 Bacterial sugar transferase PhaeoP54_00477 4e8a09fdcbb7e5b25fbac002d8db6c92 365 SUPERFAMILY SSF53383 22 364 1.11E-103 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PhaeoP54_00477 4e8a09fdcbb7e5b25fbac002d8db6c92 365 Gene3D G3DSA:3.40.640.10 1 245 4.1E-82 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PhaeoP54_00477 4e8a09fdcbb7e5b25fbac002d8db6c92 365 PIRSF PIRSF000390 2 365 1.3E-99 T 14-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase PhaeoP54_00477 4e8a09fdcbb7e5b25fbac002d8db6c92 365 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 18 362 5.0E-114 T 14-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase PhaeoP54_00477 4e8a09fdcbb7e5b25fbac002d8db6c92 365 Gene3D G3DSA:3.90.1150.10 246 364 2.9E-34 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 PhaeoP54_03584 a38c7159cb5040197e468bddb0e11768 464 Pfam PF13406 Transglycosylase SLT domain 96 387 3.4E-111 T 14-10-2018 IPR031304 Transglycosylase SLT domain 2 PhaeoP54_03584 a38c7159cb5040197e468bddb0e11768 464 SUPERFAMILY SSF47090 394 464 1.57E-16 T 14-10-2018 IPR036365 PGBD-like superfamily PhaeoP54_03584 a38c7159cb5040197e468bddb0e11768 464 Gene3D G3DSA:1.10.101.10 401 464 2.7E-11 T 14-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 PhaeoP54_03584 a38c7159cb5040197e468bddb0e11768 464 Gene3D G3DSA:1.10.530.10 138 386 6.5E-87 T 14-10-2018 PhaeoP54_03584 a38c7159cb5040197e468bddb0e11768 464 Pfam PF01471 Putative peptidoglycan binding domain 410 462 3.7E-12 T 14-10-2018 IPR002477 Peptidoglycan binding-like PhaeoP54_03584 a38c7159cb5040197e468bddb0e11768 464 Gene3D G3DSA:1.10.8.350 108 271 6.5E-87 T 14-10-2018 PhaeoP54_03584 a38c7159cb5040197e468bddb0e11768 464 SUPERFAMILY SSF53955 94 393 1.35E-102 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily PhaeoP54_03584 a38c7159cb5040197e468bddb0e11768 464 TIGRFAM TIGR02283 MltB_2: lytic murein transglycosylase 95 390 3.7E-114 T 14-10-2018 IPR011970 Lytic murein transglycosylase PhaeoP54_02628 e9facaa84447fdf72d91b828b895abc7 239 Gene3D G3DSA:1.10.287.130 25 86 1.4E-24 T 14-10-2018 PhaeoP54_02628 e9facaa84447fdf72d91b828b895abc7 239 PRINTS PR00344 Bacterial sensor protein C-terminal signature 163 177 4.8E-6 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PhaeoP54_02628 e9facaa84447fdf72d91b828b895abc7 239 PRINTS PR00344 Bacterial sensor protein C-terminal signature 195 213 4.8E-6 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PhaeoP54_02628 e9facaa84447fdf72d91b828b895abc7 239 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 128 235 1.3E-11 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PhaeoP54_02628 e9facaa84447fdf72d91b828b895abc7 239 Gene3D G3DSA:3.30.565.10 87 232 1.4E-24 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PhaeoP54_02628 e9facaa84447fdf72d91b828b895abc7 239 SMART SM00387 126 237 1.4E-19 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PhaeoP54_02628 e9facaa84447fdf72d91b828b895abc7 239 SUPERFAMILY SSF55874 77 234 1.44E-21 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PhaeoP54_03670 caa31d3daff43584455ddd3ebeb5c847 189 Gene3D G3DSA:3.40.50.1950 4 181 2.0E-33 T 14-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 PhaeoP54_03670 caa31d3daff43584455ddd3ebeb5c847 189 Pfam PF02441 Flavoprotein 9 182 8.1E-28 T 14-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 PhaeoP54_03670 caa31d3daff43584455ddd3ebeb5c847 189 SUPERFAMILY SSF52507 6 184 1.44E-34 T 14-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 PhaeoP54_03434 04f2b3b925dd8cc38e051ec669543772 221 Pfam PF01625 Peptide methionine sulfoxide reductase 35 176 9.0E-53 T 14-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 PhaeoP54_03434 04f2b3b925dd8cc38e051ec669543772 221 Gene3D G3DSA:3.30.1060.10 19 198 3.2E-60 T 14-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 PhaeoP54_03434 04f2b3b925dd8cc38e051ec669543772 221 SUPERFAMILY SSF55068 9 177 1.96E-64 T 14-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 PhaeoP54_03434 04f2b3b925dd8cc38e051ec669543772 221 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 34 176 1.2E-47 T 14-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 PhaeoP54_03434 04f2b3b925dd8cc38e051ec669543772 221 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 32 189 31.512 T 14-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 PhaeoP54_03609 1158da2b1689f332afaaf1f2d25bef13 438 Gene3D G3DSA:1.20.1250.20 5 388 5.0E-31 T 14-10-2018 PhaeoP54_03609 1158da2b1689f332afaaf1f2d25bef13 438 Pfam PF07690 Major Facilitator Superfamily 221 392 4.8E-16 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PhaeoP54_03609 1158da2b1689f332afaaf1f2d25bef13 438 Pfam PF07690 Major Facilitator Superfamily 14 200 1.3E-12 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PhaeoP54_03609 1158da2b1689f332afaaf1f2d25bef13 438 SUPERFAMILY SSF103473 8 393 2.09E-39 T 14-10-2018 IPR036259 MFS transporter superfamily PhaeoP54_01003 aa22e381e7ffc9a6355ccdb4128f626f 645 SMART SM00878 340 444 1.5E-48 T 14-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 PhaeoP54_01003 aa22e381e7ffc9a6355ccdb4128f626f 645 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 290 297 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 PhaeoP54_01003 aa22e381e7ffc9a6355ccdb4128f626f 645 Gene3D G3DSA:3.30.470.130 1 451 4.5E-190 T 14-10-2018 PhaeoP54_01003 aa22e381e7ffc9a6355ccdb4128f626f 645 SUPERFAMILY SSF51230 567 641 1.18E-20 T 14-10-2018 IPR011053 Single hybrid motif PhaeoP54_01003 aa22e381e7ffc9a6355ccdb4128f626f 645 Gene3D G3DSA:2.40.50.100 577 642 2.7E-22 T 14-10-2018 PhaeoP54_01003 aa22e381e7ffc9a6355ccdb4128f626f 645 SUPERFAMILY SSF52440 1 113 2.09E-48 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily PhaeoP54_01003 aa22e381e7ffc9a6355ccdb4128f626f 645 Pfam PF00364 Biotin-requiring enzyme 574 640 1.0E-15 T 14-10-2018 IPR000089 Biotin/lipoyl attachment PhaeoP54_01003 aa22e381e7ffc9a6355ccdb4128f626f 645 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 597 614 - T 14-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 PhaeoP54_01003 aa22e381e7ffc9a6355ccdb4128f626f 645 Pfam PF02785 Biotin carboxylase C-terminal domain 340 444 1.7E-32 T 14-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 PhaeoP54_01003 aa22e381e7ffc9a6355ccdb4128f626f 645 SUPERFAMILY SSF56059 83 348 6.54E-66 T 14-10-2018 PhaeoP54_01003 aa22e381e7ffc9a6355ccdb4128f626f 645 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 116 326 2.4E-71 T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 PhaeoP54_01003 aa22e381e7ffc9a6355ccdb4128f626f 645 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 8.6E-44 T 14-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 PhaeoP54_01003 aa22e381e7ffc9a6355ccdb4128f626f 645 SUPERFAMILY SSF51246 335 449 6.8E-34 T 14-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 PhaeoP54_03259 6c6d99fc2cc389814355c2d7317fc816 108 Pfam PF08755 Hemimethylated DNA-binding protein YccV like 6 98 6.5E-27 T 14-10-2018 IPR011722 Hemimethylated DNA-binding domain GO:0003677 PhaeoP54_03259 6c6d99fc2cc389814355c2d7317fc816 108 Gene3D G3DSA:2.30.30.390 3 106 5.3E-33 T 14-10-2018 IPR036623 Hemimethylated DNA-binding domain superfamily GO:0003677 PhaeoP54_03259 6c6d99fc2cc389814355c2d7317fc816 108 SMART SM00992 5 104 6.8E-57 T 14-10-2018 IPR011722 Hemimethylated DNA-binding domain GO:0003677 PhaeoP54_03259 6c6d99fc2cc389814355c2d7317fc816 108 TIGRFAM TIGR02097 yccV: hemimethylated DNA binding domain 6 103 6.5E-38 T 14-10-2018 IPR011722 Hemimethylated DNA-binding domain GO:0003677 PhaeoP54_03259 6c6d99fc2cc389814355c2d7317fc816 108 SUPERFAMILY SSF141255 6 98 1.2E-36 T 14-10-2018 IPR036623 Hemimethylated DNA-binding domain superfamily GO:0003677 PhaeoP54_01726 a3f9236d5cff591e1b585ccba1d2c54d 199 Gene3D G3DSA:2.40.440.10 27 199 1.4E-34 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like PhaeoP54_01726 a3f9236d5cff591e1b585ccba1d2c54d 199 SUPERFAMILY SSF141523 65 198 3.4E-26 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like PhaeoP54_01726 a3f9236d5cff591e1b585ccba1d2c54d 199 Pfam PF03734 L,D-transpeptidase catalytic domain 73 197 4.4E-13 T 14-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 PhaeoP54_03399 3a9602ba8342e5967a46f65fea8966c2 827 SUPERFAMILY SSF52540 312 497 2.61E-49 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_03399 3a9602ba8342e5967a46f65fea8966c2 827 Pfam PF11987 Translation-initiation factor 2 611 716 4.1E-37 T 14-10-2018 IPR023115 Translation initiation factor IF- 2, domain 3 PhaeoP54_03399 3a9602ba8342e5967a46f65fea8966c2 827 Gene3D G3DSA:2.40.30.10 497 615 2.9E-41 T 14-10-2018 PhaeoP54_03399 3a9602ba8342e5967a46f65fea8966c2 827 SUPERFAMILY SSF50447 728 824 5.61E-31 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily PhaeoP54_03399 3a9602ba8342e5967a46f65fea8966c2 827 SUPERFAMILY SSF50447 497 580 1.21E-25 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily PhaeoP54_03399 3a9602ba8342e5967a46f65fea8966c2 827 Gene3D G3DSA:3.40.50.10050 620 727 2.9E-36 T 14-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily PhaeoP54_03399 3a9602ba8342e5967a46f65fea8966c2 827 Pfam PF00009 Elongation factor Tu GTP binding domain 329 486 1.6E-30 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PhaeoP54_03399 3a9602ba8342e5967a46f65fea8966c2 827 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 40 824 16.951 T 14-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 PhaeoP54_03399 3a9602ba8342e5967a46f65fea8966c2 827 Gene3D G3DSA:2.40.30.10 728 825 2.9E-31 T 14-10-2018 PhaeoP54_03399 3a9602ba8342e5967a46f65fea8966c2 827 Pfam PF08364 Bacterial translation initiation factor IF-2 associated region 7 46 8.3E-8 T 14-10-2018 IPR013575 Initiation factor 2 associated domain, bacterial PhaeoP54_03399 3a9602ba8342e5967a46f65fea8966c2 827 ProSitePatterns PS01176 Initiation factor 2 signature. 777 799 - T 14-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 PhaeoP54_03399 3a9602ba8342e5967a46f65fea8966c2 827 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 326 483 4.2E-31 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 PhaeoP54_03399 3a9602ba8342e5967a46f65fea8966c2 827 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 250 299 2.8E-14 T 14-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal PhaeoP54_03399 3a9602ba8342e5967a46f65fea8966c2 827 SUPERFAMILY SSF52156 612 733 1.23E-33 T 14-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily PhaeoP54_03399 3a9602ba8342e5967a46f65fea8966c2 827 Gene3D G3DSA:3.40.50.300 321 496 3.0E-67 T 14-10-2018 PhaeoP54_03399 3a9602ba8342e5967a46f65fea8966c2 827 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 243 826 2.1E-243 T 14-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 PhaeoP54_02207 5dee95b64587dee5a3dafa0c8d77c5fa 807 Pfam PF16350 FAD dependent oxidoreductase central domain 368 423 6.6E-20 T 14-10-2018 IPR032503 FAD dependent oxidoreductase, central domain PhaeoP54_02207 5dee95b64587dee5a3dafa0c8d77c5fa 807 SUPERFAMILY SSF103025 418 719 2.04E-94 T 14-10-2018 PhaeoP54_02207 5dee95b64587dee5a3dafa0c8d77c5fa 807 Gene3D G3DSA:3.30.9.10 87 326 1.1E-130 T 14-10-2018 PhaeoP54_02207 5dee95b64587dee5a3dafa0c8d77c5fa 807 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 704 787 3.6E-10 T 14-10-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 PhaeoP54_02207 5dee95b64587dee5a3dafa0c8d77c5fa 807 SUPERFAMILY SSF101790 723 806 6.7E-13 T 14-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal PhaeoP54_02207 5dee95b64587dee5a3dafa0c8d77c5fa 807 Pfam PF01266 FAD dependent oxidoreductase 9 365 2.7E-64 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 PhaeoP54_02207 5dee95b64587dee5a3dafa0c8d77c5fa 807 SUPERFAMILY SSF51905 9 410 1.34E-61 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PhaeoP54_02207 5dee95b64587dee5a3dafa0c8d77c5fa 807 Gene3D G3DSA:2.40.30.110 719 791 7.2E-13 T 14-10-2018 PhaeoP54_02207 5dee95b64587dee5a3dafa0c8d77c5fa 807 SUPERFAMILY SSF54373 223 326 3.02E-20 T 14-10-2018 PhaeoP54_02207 5dee95b64587dee5a3dafa0c8d77c5fa 807 Gene3D G3DSA:3.30.1360.120 418 686 8.7E-107 T 14-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 PhaeoP54_02207 5dee95b64587dee5a3dafa0c8d77c5fa 807 Gene3D G3DSA:3.30.70.1400 489 710 8.7E-107 T 14-10-2018 PhaeoP54_02207 5dee95b64587dee5a3dafa0c8d77c5fa 807 Gene3D G3DSA:3.50.50.60 9 384 1.1E-130 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PhaeoP54_02207 5dee95b64587dee5a3dafa0c8d77c5fa 807 Pfam PF01571 Aminomethyltransferase folate-binding domain 425 695 2.0E-76 T 14-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain PhaeoP54_02622 2a39f73f8965d6b01b1c502cd0ce72ad 381 Gene3D G3DSA:3.40.50.1970 4 190 9.5E-53 T 14-10-2018 PhaeoP54_02622 2a39f73f8965d6b01b1c502cd0ce72ad 381 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 265 285 - T 14-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 PhaeoP54_02622 2a39f73f8965d6b01b1c502cd0ce72ad 381 Pfam PF00465 Iron-containing alcohol dehydrogenase 10 371 2.1E-115 T 14-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 PhaeoP54_02622 2a39f73f8965d6b01b1c502cd0ce72ad 381 Gene3D G3DSA:1.20.1090.10 192 381 1.3E-60 T 14-10-2018 PhaeoP54_02622 2a39f73f8965d6b01b1c502cd0ce72ad 381 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 179 207 - T 14-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 PhaeoP54_02622 2a39f73f8965d6b01b1c502cd0ce72ad 381 SUPERFAMILY SSF56796 6 380 1.44E-123 T 14-10-2018 PhaeoP54_01742 baf0fc3d78a90547e05d924c2ddab1d3 414 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 244 262 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site PhaeoP54_01742 baf0fc3d78a90547e05d924c2ddab1d3 414 PRINTS PR00313 NodO calcium binding signature 248 256 2.3E-9 T 14-10-2018 PhaeoP54_01742 baf0fc3d78a90547e05d924c2ddab1d3 414 PRINTS PR00313 NodO calcium binding signature 133 144 2.3E-9 T 14-10-2018 PhaeoP54_01742 baf0fc3d78a90547e05d924c2ddab1d3 414 PRINTS PR00313 NodO calcium binding signature 338 347 2.3E-9 T 14-10-2018 PhaeoP54_01742 baf0fc3d78a90547e05d924c2ddab1d3 414 PRINTS PR00313 NodO calcium binding signature 311 319 2.3E-9 T 14-10-2018 PhaeoP54_01742 baf0fc3d78a90547e05d924c2ddab1d3 414 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 262 280 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site PhaeoP54_01742 baf0fc3d78a90547e05d924c2ddab1d3 414 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 128 143 1.6 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_01742 baf0fc3d78a90547e05d924c2ddab1d3 414 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 293 309 0.026 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_01742 baf0fc3d78a90547e05d924c2ddab1d3 414 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 257 273 2.0 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_01742 baf0fc3d78a90547e05d924c2ddab1d3 414 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 311 327 0.01 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_01742 baf0fc3d78a90547e05d924c2ddab1d3 414 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 275 291 2.9 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_01742 baf0fc3d78a90547e05d924c2ddab1d3 414 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 328 345 0.0049 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_01742 baf0fc3d78a90547e05d924c2ddab1d3 414 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 221 237 0.56 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_01742 baf0fc3d78a90547e05d924c2ddab1d3 414 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 239 255 0.0013 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_01742 baf0fc3d78a90547e05d924c2ddab1d3 414 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 208 219 28.0 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_01742 baf0fc3d78a90547e05d924c2ddab1d3 414 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 325 343 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site PhaeoP54_01742 baf0fc3d78a90547e05d924c2ddab1d3 414 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 235 253 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site PhaeoP54_01742 baf0fc3d78a90547e05d924c2ddab1d3 414 Gene3D G3DSA:2.150.10.10 251 295 1.2E-8 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal PhaeoP54_01742 baf0fc3d78a90547e05d924c2ddab1d3 414 Gene3D G3DSA:2.150.10.10 199 250 1.8E-8 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal PhaeoP54_01742 baf0fc3d78a90547e05d924c2ddab1d3 414 Gene3D G3DSA:2.150.10.10 296 413 3.4E-27 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal PhaeoP54_01742 baf0fc3d78a90547e05d924c2ddab1d3 414 SUPERFAMILY SSF51120 226 402 1.31E-32 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal PhaeoP54_01618 9c8db44bf7fc6e024d4b81dee45b2e2c 192 Pfam PF09335 SNARE associated Golgi protein 36 155 5.0E-16 T 14-10-2018 IPR032816 SNARE associated Golgi protein PhaeoP54_02213 c3c0d6bc8d11c6dd36bb91641aa2810b 386 SUPERFAMILY SSF47203 228 380 2.09E-48 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 PhaeoP54_02213 c3c0d6bc8d11c6dd36bb91641aa2810b 386 Gene3D G3DSA:1.20.140.10 235 384 1.7E-45 T 14-10-2018 PhaeoP54_02213 c3c0d6bc8d11c6dd36bb91641aa2810b 386 SUPERFAMILY SSF56645 11 240 1.16E-59 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 PhaeoP54_02213 c3c0d6bc8d11c6dd36bb91641aa2810b 386 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 124 217 7.2E-24 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 PhaeoP54_02213 c3c0d6bc8d11c6dd36bb91641aa2810b 386 Gene3D G3DSA:2.40.110.10 123 234 2.7E-43 T 14-10-2018 PhaeoP54_02213 c3c0d6bc8d11c6dd36bb91641aa2810b 386 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 229 378 4.3E-43 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PhaeoP54_02213 c3c0d6bc8d11c6dd36bb91641aa2810b 386 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 14 119 3.8E-10 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 PhaeoP54_02213 c3c0d6bc8d11c6dd36bb91641aa2810b 386 Gene3D G3DSA:1.10.540.10 8 122 3.0E-21 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 PhaeoP54_00207 0dc3c6409b30b7728a392d944e067cfd 442 SUPERFAMILY SSF55424 338 439 7.9E-10 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 PhaeoP54_00207 0dc3c6409b30b7728a392d944e067cfd 442 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 45 60 6.9E-59 T 14-10-2018 PhaeoP54_00207 0dc3c6409b30b7728a392d944e067cfd 442 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 174 199 6.9E-59 T 14-10-2018 PhaeoP54_00207 0dc3c6409b30b7728a392d944e067cfd 442 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 338 359 6.9E-59 T 14-10-2018 PhaeoP54_00207 0dc3c6409b30b7728a392d944e067cfd 442 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 140 149 6.9E-59 T 14-10-2018 PhaeoP54_00207 0dc3c6409b30b7728a392d944e067cfd 442 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 302 309 6.9E-59 T 14-10-2018 PhaeoP54_00207 0dc3c6409b30b7728a392d944e067cfd 442 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 417 437 6.9E-59 T 14-10-2018 PhaeoP54_00207 0dc3c6409b30b7728a392d944e067cfd 442 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 259 273 6.9E-59 T 14-10-2018 PhaeoP54_00207 0dc3c6409b30b7728a392d944e067cfd 442 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 13 35 6.9E-59 T 14-10-2018 PhaeoP54_00207 0dc3c6409b30b7728a392d944e067cfd 442 Gene3D G3DSA:3.50.50.60 9 428 4.1E-108 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PhaeoP54_00207 0dc3c6409b30b7728a392d944e067cfd 442 SUPERFAMILY SSF51905 12 327 5.51E-53 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PhaeoP54_00207 0dc3c6409b30b7728a392d944e067cfd 442 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 137 155 2.4E-38 T 14-10-2018 PhaeoP54_00207 0dc3c6409b30b7728a392d944e067cfd 442 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 14 33 2.4E-38 T 14-10-2018 PhaeoP54_00207 0dc3c6409b30b7728a392d944e067cfd 442 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 287 309 2.4E-38 T 14-10-2018 PhaeoP54_00207 0dc3c6409b30b7728a392d944e067cfd 442 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 258 274 2.4E-38 T 14-10-2018 PhaeoP54_00207 0dc3c6409b30b7728a392d944e067cfd 442 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 174 192 2.4E-38 T 14-10-2018 PhaeoP54_00207 0dc3c6409b30b7728a392d944e067cfd 442 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 12 322 9.2E-63 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PhaeoP54_00207 0dc3c6409b30b7728a392d944e067cfd 442 PIRSF PIRSF000350 2 425 5.8E-61 T 14-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 PhaeoP54_02552 79dd22f1505f560ea377c43cc34f24a1 648 Gene3D G3DSA:3.90.1310.10 62 246 1.5E-39 T 14-10-2018 PhaeoP54_02552 79dd22f1505f560ea377c43cc34f24a1 648 Pfam PF03717 Penicillin-binding Protein dimerisation domain 62 236 2.0E-40 T 14-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 PhaeoP54_02552 79dd22f1505f560ea377c43cc34f24a1 648 Gene3D G3DSA:3.30.1390.30 83 158 1.5E-39 T 14-10-2018 PhaeoP54_02552 79dd22f1505f560ea377c43cc34f24a1 648 SUPERFAMILY SSF56519 54 250 5.23E-47 T 14-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 PhaeoP54_02552 79dd22f1505f560ea377c43cc34f24a1 648 SUPERFAMILY SSF56601 252 607 4.1E-92 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like PhaeoP54_02552 79dd22f1505f560ea377c43cc34f24a1 648 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 17 607 3.9E-218 T 14-10-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0009002|GO:0009252|GO:0016020 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 PhaeoP54_02552 79dd22f1505f560ea377c43cc34f24a1 648 Gene3D G3DSA:3.40.710.10 250 609 2.9E-91 T 14-10-2018 PhaeoP54_02552 79dd22f1505f560ea377c43cc34f24a1 648 Pfam PF00905 Penicillin binding protein transpeptidase domain 269 603 8.0E-65 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 PhaeoP54_00158 4c0dee68cff131d45b1026e0e96d08cb 60 Pfam PF03884 DNA gyrase inhibitor YacG 1 45 5.9E-15 T 14-10-2018 IPR005584 DNA gyrase inhibitor YacG GO:0008270 PhaeoP54_00158 4c0dee68cff131d45b1026e0e96d08cb 60 Gene3D G3DSA:3.30.50.10 1 56 1.4E-15 T 14-10-2018 IPR013088 Zinc finger, NHR/GATA-type GO:0006355|GO:0008270 Reactome: R-HSA-383280 PhaeoP54_00158 4c0dee68cff131d45b1026e0e96d08cb 60 SUPERFAMILY SSF57716 1 50 2.99E-14 T 14-10-2018 PhaeoP54_00158 4c0dee68cff131d45b1026e0e96d08cb 60 Hamap MF_00649 DNA gyrase inhibitor YacG [yacG]. 1 50 13.024 T 14-10-2018 IPR005584 DNA gyrase inhibitor YacG GO:0008270 PhaeoP54_03419 a627812cdb8792ed27bc03f63f0a2be0 623 Pfam PF00664 ABC transporter transmembrane region 37 289 1.2E-16 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 PhaeoP54_03419 a627812cdb8792ed27bc03f63f0a2be0 623 Gene3D G3DSA:1.20.1560.10 25 345 7.7E-28 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 PhaeoP54_03419 a627812cdb8792ed27bc03f63f0a2be0 623 ProSitePatterns PS00211 ABC transporters family signature. 501 515 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PhaeoP54_03419 a627812cdb8792ed27bc03f63f0a2be0 623 SUPERFAMILY SSF90123 20 340 3.66E-45 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 PhaeoP54_03419 a627812cdb8792ed27bc03f63f0a2be0 623 Gene3D G3DSA:3.40.50.300 349 609 6.4E-89 T 14-10-2018 PhaeoP54_03419 a627812cdb8792ed27bc03f63f0a2be0 623 SUPERFAMILY SSF52540 351 599 2.22E-85 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_03419 a627812cdb8792ed27bc03f63f0a2be0 623 Pfam PF00005 ABC transporter 376 529 1.0E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PhaeoP54_03419 a627812cdb8792ed27bc03f63f0a2be0 623 SMART SM00382 384 575 2.2E-19 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_03651 8a4f6ae7c0112298a6cd6a3835e0391e 242 SUPERFAMILY SSF56300 19 240 1.15E-42 T 14-10-2018 PhaeoP54_03651 8a4f6ae7c0112298a6cd6a3835e0391e 242 Pfam PF00149 Calcineurin-like phosphoesterase 23 169 8.3E-12 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 PhaeoP54_03651 8a4f6ae7c0112298a6cd6a3835e0391e 242 Gene3D G3DSA:3.60.21.10 19 242 5.5E-51 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like PhaeoP54_02894 6b05507650e14e2cdf904899f2c994b1 113 Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. 12 107 27.719 T 14-10-2018 IPR022935 ATP-dependent Clp protease adaptor protein ClpS PhaeoP54_02894 6b05507650e14e2cdf904899f2c994b1 113 Gene3D G3DSA:3.30.1390.10 7 113 2.8E-41 T 14-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like PhaeoP54_02894 6b05507650e14e2cdf904899f2c994b1 113 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 30 108 3.5E-34 T 14-10-2018 IPR003769 Adaptor protein ClpS, core GO:0030163 Reactome: R-HSA-983168 PhaeoP54_02894 6b05507650e14e2cdf904899f2c994b1 113 SUPERFAMILY SSF54736 27 111 3.87E-33 T 14-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like PhaeoP54_00884 a8a17b9fc3e31790e33f912548f20e1d 432 Gene3D G3DSA:3.40.640.10 64 338 1.1E-153 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PhaeoP54_00884 a8a17b9fc3e31790e33f912548f20e1d 432 Pfam PF00202 Aminotransferase class-III 28 423 8.3E-118 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PhaeoP54_00884 a8a17b9fc3e31790e33f912548f20e1d 432 Gene3D G3DSA:3.90.1150.10 13 422 1.1E-153 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 PhaeoP54_00884 a8a17b9fc3e31790e33f912548f20e1d 432 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 16 427 6.3E-168 T 14-10-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 PhaeoP54_00884 a8a17b9fc3e31790e33f912548f20e1d 432 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 250 287 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PhaeoP54_00884 a8a17b9fc3e31790e33f912548f20e1d 432 SUPERFAMILY SSF53383 8 430 2.24E-116 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PhaeoP54_00223 0c7a2f7bc9d5760101faf06561ea6923 134 Pfam PF00376 MerR family regulatory protein 2 38 9.5E-16 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PhaeoP54_00223 0c7a2f7bc9d5760101faf06561ea6923 134 Gene3D G3DSA:1.10.1660.10 1 124 2.4E-36 T 14-10-2018 PhaeoP54_00223 0c7a2f7bc9d5760101faf06561ea6923 134 Pfam PF09278 MerR, DNA binding 43 107 6.3E-19 T 14-10-2018 IPR015358 Transcription regulator MerR, DNA binding PhaeoP54_00223 0c7a2f7bc9d5760101faf06561ea6923 134 SMART SM00422 1 69 2.3E-25 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PhaeoP54_00223 0c7a2f7bc9d5760101faf06561ea6923 134 TIGRFAM TIGR02044 CueR: Cu(I)-responsive transcriptional regulator 1 125 9.6E-48 T 14-10-2018 IPR011789 Cu(I)-responsive transcriptional regulator GO:0003677|GO:0003700|GO:0005507|GO:0045893 PhaeoP54_00223 0c7a2f7bc9d5760101faf06561ea6923 134 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 6.1E-7 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PhaeoP54_00223 0c7a2f7bc9d5760101faf06561ea6923 134 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 36 56 6.1E-7 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PhaeoP54_00223 0c7a2f7bc9d5760101faf06561ea6923 134 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 6.1E-7 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PhaeoP54_00223 0c7a2f7bc9d5760101faf06561ea6923 134 SUPERFAMILY SSF46955 1 125 5.13E-36 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily PhaeoP54_03334 94ac8e821422d7f583cea64e19d60dc6 186 Pfam PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal 2 41 1.0E-21 T 14-10-2018 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 PhaeoP54_03334 94ac8e821422d7f583cea64e19d60dc6 186 PRINTS PR00162 Rieske 2Fe-2S subunit signature 158 170 1.2E-16 T 14-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 PhaeoP54_03334 94ac8e821422d7f583cea64e19d60dc6 186 PRINTS PR00162 Rieske 2Fe-2S subunit signature 146 158 1.2E-16 T 14-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 PhaeoP54_03334 94ac8e821422d7f583cea64e19d60dc6 186 PRINTS PR00162 Rieske 2Fe-2S subunit signature 123 134 1.2E-16 T 14-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 PhaeoP54_03334 94ac8e821422d7f583cea64e19d60dc6 186 Pfam PF00355 Rieske [2Fe-2S] domain 118 172 5.1E-13 T 14-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 PhaeoP54_03334 94ac8e821422d7f583cea64e19d60dc6 186 SUPERFAMILY SSF50022 32 182 3.93E-37 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 PhaeoP54_03334 94ac8e821422d7f583cea64e19d60dc6 186 TIGRFAM TIGR01416 Rieske_proteo: ubiquinol-cytochrome c reductase, iron-sulfur subunit 10 186 5.2E-66 T 14-10-2018 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 PhaeoP54_03334 94ac8e821422d7f583cea64e19d60dc6 186 Gene3D G3DSA:1.20.5.510 1 41 1.6E-25 T 14-10-2018 PhaeoP54_03334 94ac8e821422d7f583cea64e19d60dc6 186 Gene3D G3DSA:2.102.10.10 42 186 7.3E-52 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 PhaeoP54_03334 94ac8e821422d7f583cea64e19d60dc6 186 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 10 38 1.9E-6 T 14-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal PhaeoP54_00994 7a30ec82a58ae320400fb3cc9923b273 451 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 4 434 1.7E-154 T 14-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 PhaeoP54_00994 7a30ec82a58ae320400fb3cc9923b273 451 Gene3D G3DSA:2.160.10.10 227 436 1.1E-55 T 14-10-2018 PhaeoP54_00994 7a30ec82a58ae320400fb3cc9923b273 451 Pfam PF12804 MobA-like NTP transferase domain 6 133 1.2E-20 T 14-10-2018 IPR025877 MobA-like NTP transferase PhaeoP54_00994 7a30ec82a58ae320400fb3cc9923b273 451 Gene3D G3DSA:3.90.550.10 1 226 2.1E-61 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PhaeoP54_00994 7a30ec82a58ae320400fb3cc9923b273 451 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 299 334 7.1E-5 T 14-10-2018 IPR001451 Hexapeptide repeat PhaeoP54_00994 7a30ec82a58ae320400fb3cc9923b273 451 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 264 296 3.9E-6 T 14-10-2018 IPR001451 Hexapeptide repeat PhaeoP54_00994 7a30ec82a58ae320400fb3cc9923b273 451 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 377 411 1.4E-4 T 14-10-2018 IPR001451 Hexapeptide repeat PhaeoP54_00994 7a30ec82a58ae320400fb3cc9923b273 451 SUPERFAMILY SSF51161 253 421 7.86E-46 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily PhaeoP54_00994 7a30ec82a58ae320400fb3cc9923b273 451 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 2 434 38.648 T 14-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 PhaeoP54_00994 7a30ec82a58ae320400fb3cc9923b273 451 SUPERFAMILY SSF53448 1 251 1.78E-60 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PhaeoP54_00390 35691a69b5915d2af09c012239a347e6 302 SUPERFAMILY SSF53850 39 278 7.43E-59 T 14-10-2018 PhaeoP54_00390 35691a69b5915d2af09c012239a347e6 302 Gene3D G3DSA:3.40.190.10 30 263 3.0E-57 T 14-10-2018 PhaeoP54_00390 35691a69b5915d2af09c012239a347e6 302 TIGRFAM TIGR01098 3A0109s03R: phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein 7 259 8.4E-67 T 14-10-2018 IPR005770 Phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein GO:0043190|GO:0055085 PhaeoP54_00390 35691a69b5915d2af09c012239a347e6 302 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 30 290 3.3E-59 T 14-10-2018 PhaeoP54_00390 35691a69b5915d2af09c012239a347e6 302 TIGRFAM TIGR03431 PhnD: phosphonate ABC transporter, periplasmic phosphonate binding protein 2 300 4.3E-94 T 14-10-2018 IPR017797 Phosphonate ABC transporter, substrate-binding protein GO:0015716|GO:0043190 PhaeoP54_00390 35691a69b5915d2af09c012239a347e6 302 Gene3D G3DSA:3.40.190.10 115 238 3.0E-57 T 14-10-2018 PhaeoP54_03589 699d2e32e274158e091a56c0e7ab73e8 87 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 85 2.4E-21 T 14-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 PhaeoP54_03589 699d2e32e274158e091a56c0e7ab73e8 87 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 17.474 T 14-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 PhaeoP54_03589 699d2e32e274158e091a56c0e7ab73e8 87 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 12 86 7.0E-28 T 14-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 PhaeoP54_03589 699d2e32e274158e091a56c0e7ab73e8 87 SUPERFAMILY SSF46992 3 86 1.31E-29 T 14-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 PhaeoP54_03589 699d2e32e274158e091a56c0e7ab73e8 87 Gene3D G3DSA:1.20.58.110 1 87 5.7E-28 T 14-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 PhaeoP54_03589 699d2e32e274158e091a56c0e7ab73e8 87 Pfam PF01649 Ribosomal protein S20 2 84 1.5E-26 T 14-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 PhaeoP54_01169 f676a47a8c46722be68e0014a7694070 253 SUPERFAMILY SSF111331 22 240 4.84E-52 T 14-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily PhaeoP54_01169 f676a47a8c46722be68e0014a7694070 253 Gene3D G3DSA:3.40.50.10330 8 102 3.1E-10 T 14-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 PhaeoP54_01169 f676a47a8c46722be68e0014a7694070 253 Gene3D G3DSA:2.60.200.30 103 229 2.2E-22 T 14-10-2018 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal GO:0003951|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 PhaeoP54_01169 f676a47a8c46722be68e0014a7694070 253 Pfam PF01513 ATP-NAD kinase 30 180 5.7E-18 T 14-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 PhaeoP54_03248 3ec1ef690d36c529daef6502916f05cf 816 SUPERFAMILY SSF51905 8 418 1.42E-66 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PhaeoP54_03248 3ec1ef690d36c529daef6502916f05cf 816 Pfam PF01571 Aminomethyltransferase folate-binding domain 431 701 1.0E-73 T 14-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain PhaeoP54_03248 3ec1ef690d36c529daef6502916f05cf 816 Pfam PF16350 FAD dependent oxidoreductase central domain 373 427 1.7E-15 T 14-10-2018 IPR032503 FAD dependent oxidoreductase, central domain PhaeoP54_03248 3ec1ef690d36c529daef6502916f05cf 816 SUPERFAMILY SSF54373 229 330 1.45E-31 T 14-10-2018 PhaeoP54_03248 3ec1ef690d36c529daef6502916f05cf 816 Gene3D G3DSA:3.50.50.60 10 389 7.5E-137 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PhaeoP54_03248 3ec1ef690d36c529daef6502916f05cf 816 Gene3D G3DSA:3.30.9.10 89 330 7.5E-137 T 14-10-2018 PhaeoP54_03248 3ec1ef690d36c529daef6502916f05cf 816 Pfam PF01266 FAD dependent oxidoreductase 9 370 4.9E-61 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 PhaeoP54_03248 3ec1ef690d36c529daef6502916f05cf 816 Gene3D G3DSA:2.40.30.110 721 801 4.0E-18 T 14-10-2018 PhaeoP54_03248 3ec1ef690d36c529daef6502916f05cf 816 Gene3D G3DSA:3.30.70.1400 494 715 1.5E-107 T 14-10-2018 PhaeoP54_03248 3ec1ef690d36c529daef6502916f05cf 816 Gene3D G3DSA:3.30.1360.120 429 690 1.5E-107 T 14-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 PhaeoP54_03248 3ec1ef690d36c529daef6502916f05cf 816 SUPERFAMILY SSF101790 725 815 2.94E-19 T 14-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal PhaeoP54_03248 3ec1ef690d36c529daef6502916f05cf 816 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 708 801 6.1E-17 T 14-10-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 PhaeoP54_03248 3ec1ef690d36c529daef6502916f05cf 816 SUPERFAMILY SSF103025 423 722 5.97E-97 T 14-10-2018 PhaeoP54_03164 4ced6af8bae067b711c1e45ecee46638 1127 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 30 1035 2.0E-142 T 14-10-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PhaeoP54_03164 4ced6af8bae067b711c1e45ecee46638 1127 Pfam PF01336 OB-fold nucleic acid binding domain 1000 1074 7.4E-9 T 14-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 PhaeoP54_03164 4ced6af8bae067b711c1e45ecee46638 1127 Pfam PF14579 Helix-hairpin-helix motif 830 919 7.5E-20 T 14-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PhaeoP54_03164 4ced6af8bae067b711c1e45ecee46638 1127 Pfam PF02811 PHP domain 33 92 6.6E-8 T 14-10-2018 IPR004013 PHP domain GO:0003824 PhaeoP54_03164 4ced6af8bae067b711c1e45ecee46638 1127 SUPERFAMILY SSF89550 35 77 1.24E-7 T 14-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 PhaeoP54_03164 4ced6af8bae067b711c1e45ecee46638 1127 Hamap MF_01902 Error-prone DNA polymerase [dnaE2]. 28 1127 13.401 T 14-10-2018 IPR023073 DNA polymerase, error-prone GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PhaeoP54_03164 4ced6af8bae067b711c1e45ecee46638 1127 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 334 756 7.8E-137 T 14-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PhaeoP54_03164 4ced6af8bae067b711c1e45ecee46638 1127 SMART SM00481 29 133 2.1E-6 T 14-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal PhaeoP54_01438 cd77cd2de20f3213013c22899fbfe559 152 SUPERFAMILY SSF52161 1 140 1.1E-52 T 14-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 PhaeoP54_01438 cd77cd2de20f3213013c22899fbfe559 152 Gene3D G3DSA:3.90.1180.10 1 142 3.5E-55 T 14-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 PhaeoP54_01438 cd77cd2de20f3213013c22899fbfe559 152 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 141 27.54 T 14-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 PhaeoP54_01438 cd77cd2de20f3213013c22899fbfe559 152 PIRSF PIRSF002181 1 152 9.2E-49 T 14-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 PhaeoP54_01438 cd77cd2de20f3213013c22899fbfe559 152 Pfam PF00572 Ribosomal protein L13 14 138 3.1E-50 T 14-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 PhaeoP54_01438 cd77cd2de20f3213013c22899fbfe559 152 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 5 141 2.2E-57 T 14-10-2018 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PhaeoP54_01438 cd77cd2de20f3213013c22899fbfe559 152 ProSitePatterns PS00783 Ribosomal protein L13 signature. 105 127 - T 14-10-2018 IPR023563 Ribosomal protein L13, conserved site GO:0003735|GO:0005840|GO:0006412 PhaeoP54_02042 bbd9dd97897b1405ce269f847160f93b 410 Pfam PF02129 X-Pro dipeptidyl-peptidase (S15 family) 167 315 4.3E-5 T 14-10-2018 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain GO:0016787 PhaeoP54_02042 bbd9dd97897b1405ce269f847160f93b 410 SUPERFAMILY SSF53474 157 402 1.22E-28 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold PhaeoP54_02042 bbd9dd97897b1405ce269f847160f93b 410 Gene3D G3DSA:3.40.50.1820 149 387 2.5E-27 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold PhaeoP54_01343 3f74fc741de5a1469c864cd79ca81326 86 Gene3D G3DSA:1.10.1200.10 2 78 8.5E-10 T 14-10-2018 IPR036736 ACP-like superfamily PhaeoP54_01343 3f74fc741de5a1469c864cd79ca81326 86 SUPERFAMILY SSF47336 2 80 3.02E-8 T 14-10-2018 IPR036736 ACP-like superfamily PhaeoP54_01343 3f74fc741de5a1469c864cd79ca81326 86 Pfam PF00550 Phosphopantetheine attachment site 5 74 4.6E-6 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain PhaeoP54_01011 6f37d25a08eddff5fe6ae4d7ee6a8026 397 SUPERFAMILY SSF52833 15 188 1.23E-49 T 14-10-2018 IPR036249 Thioredoxin-like superfamily PhaeoP54_01011 6f37d25a08eddff5fe6ae4d7ee6a8026 397 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 24 169 9.1E-51 T 14-10-2018 PhaeoP54_01011 6f37d25a08eddff5fe6ae4d7ee6a8026 397 Gene3D G3DSA:1.10.10.1590 13 86 1.0E-26 T 14-10-2018 PhaeoP54_01011 6f37d25a08eddff5fe6ae4d7ee6a8026 397 ProSitePatterns PS01099 Respiratory-chain NADH dehydrogenase 24 Kd subunit signature. 127 145 - T 14-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PhaeoP54_01011 6f37d25a08eddff5fe6ae4d7ee6a8026 397 Gene3D G3DSA:3.40.30.10 90 189 3.5E-24 T 14-10-2018 PhaeoP54_01011 6f37d25a08eddff5fe6ae4d7ee6a8026 397 TIGRFAM TIGR01958 nuoE_fam: NADH-quinone oxidoreductase, E subunit 23 169 2.8E-51 T 14-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PhaeoP54_00132 3f77b6e8da39febc463f8945d51e1e8b 525 Pfam PF00884 Sulfatase 9 380 7.4E-52 T 14-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 PhaeoP54_00132 3f77b6e8da39febc463f8945d51e1e8b 525 SUPERFAMILY SSF53649 7 493 5.67E-90 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 PhaeoP54_00132 3f77b6e8da39febc463f8945d51e1e8b 525 Gene3D G3DSA:3.40.720.10 9 468 1.6E-125 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 PhaeoP54_00132 3f77b6e8da39febc463f8945d51e1e8b 525 Gene3D G3DSA:1.10.20.100 470 515 6.4E-17 T 14-10-2018 PhaeoP54_02046 952352fd5bd39d3aa6226b00b1467338 472 Gene3D G3DSA:3.40.640.10 104 349 6.2E-126 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PhaeoP54_02046 952352fd5bd39d3aa6226b00b1467338 472 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 78 393 1.3E-47 T 14-10-2018 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 PhaeoP54_02046 952352fd5bd39d3aa6226b00b1467338 472 Gene3D G3DSA:3.90.1150.170 23 460 6.2E-126 T 14-10-2018 PhaeoP54_02046 952352fd5bd39d3aa6226b00b1467338 472 SUPERFAMILY SSF53383 10 470 1.99E-91 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PhaeoP54_00516 d8b520d4c6326dde81503d08ac06fb8d 324 Gene3D G3DSA:3.40.190.10 163 266 3.3E-58 T 14-10-2018 PhaeoP54_00516 d8b520d4c6326dde81503d08ac06fb8d 324 SUPERFAMILY SSF46785 4 87 9.8E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_00516 d8b520d4c6326dde81503d08ac06fb8d 324 Pfam PF03466 LysR substrate binding domain 89 295 4.4E-40 T 14-10-2018 IPR005119 LysR, substrate-binding PhaeoP54_00516 d8b520d4c6326dde81503d08ac06fb8d 324 Gene3D G3DSA:1.10.10.10 3 91 7.0E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_00516 d8b520d4c6326dde81503d08ac06fb8d 324 Gene3D G3DSA:3.40.190.10 92 291 3.3E-58 T 14-10-2018 PhaeoP54_00516 d8b520d4c6326dde81503d08ac06fb8d 324 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 4.5E-17 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PhaeoP54_00516 d8b520d4c6326dde81503d08ac06fb8d 324 SUPERFAMILY SSF53850 87 298 1.05E-41 T 14-10-2018 PhaeoP54_01731 b0f9c4d79c3f20e40b8b48b297949288 966 ProSitePatterns PS00211 ABC transporters family signature. 848 862 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PhaeoP54_01731 b0f9c4d79c3f20e40b8b48b297949288 966 Gene3D G3DSA:3.30.190.20 133 247 2.8E-241 T 14-10-2018 PhaeoP54_01731 b0f9c4d79c3f20e40b8b48b297949288 966 Gene3D G3DSA:1.20.1580.10 710 848 1.5E-138 T 14-10-2018 PhaeoP54_01731 b0f9c4d79c3f20e40b8b48b297949288 966 Gene3D G3DSA:3.40.50.300 636 954 1.5E-138 T 14-10-2018 PhaeoP54_01731 b0f9c4d79c3f20e40b8b48b297949288 966 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 7 943 0.0 T 14-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 PhaeoP54_01731 b0f9c4d79c3f20e40b8b48b297949288 966 Gene3D G3DSA:1.10.8.280 297 413 2.8E-241 T 14-10-2018 PhaeoP54_01731 b0f9c4d79c3f20e40b8b48b297949288 966 ProSitePatterns PS00211 ABC transporters family signature. 507 521 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PhaeoP54_01731 b0f9c4d79c3f20e40b8b48b297949288 966 Hamap MF_00205 UvrABC system protein A [uvrA]. 4 958 22.582 T 14-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 PhaeoP54_01731 b0f9c4d79c3f20e40b8b48b297949288 966 SUPERFAMILY SSF52540 7 589 3.69E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_01731 b0f9c4d79c3f20e40b8b48b297949288 966 Gene3D G3DSA:1.20.1580.10 93 512 2.8E-241 T 14-10-2018 PhaeoP54_01731 b0f9c4d79c3f20e40b8b48b297949288 966 SUPERFAMILY SSF52540 640 928 7.43E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_01731 b0f9c4d79c3f20e40b8b48b297949288 966 Gene3D G3DSA:3.40.50.300 9 614 2.8E-241 T 14-10-2018 PhaeoP54_03545 5bdf2e70e00ea71cf6d76bf7bdb845a6 329 Gene3D G3DSA:3.40.50.720 5 312 2.2E-48 T 14-10-2018 PhaeoP54_03545 5bdf2e70e00ea71cf6d76bf7bdb845a6 329 Pfam PF13460 NAD(P)H-binding 9 156 7.5E-15 T 14-10-2018 IPR016040 NAD(P)-binding domain PhaeoP54_03545 5bdf2e70e00ea71cf6d76bf7bdb845a6 329 SUPERFAMILY SSF51735 1 307 7.44E-51 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PhaeoP54_02003 0577b426df96db3deee335dd13b83a7d 424 Gene3D G3DSA:3.40.50.1820 82 391 2.4E-6 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold PhaeoP54_02003 0577b426df96db3deee335dd13b83a7d 424 SUPERFAMILY SSF53474 88 406 1.0E-31 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold PhaeoP54_02003 0577b426df96db3deee335dd13b83a7d 424 PIRSF PIRSF020818 1 420 9.2E-169 T 14-10-2018 IPR010915 Polyhydroxyalkanoate depolymerase PhaeoP54_02003 0577b426df96db3deee335dd13b83a7d 424 Pfam PF06850 PHB de-polymerase C-terminus 207 407 2.6E-89 T 14-10-2018 IPR009656 PHB de-polymerase, C-terminal PhaeoP54_02003 0577b426df96db3deee335dd13b83a7d 424 TIGRFAM TIGR01849 PHB_depoly_PhaZ: polyhydroxyalkanoate depolymerase, intracellular 6 407 1.4E-173 T 14-10-2018 IPR010915 Polyhydroxyalkanoate depolymerase PhaeoP54_02902 463ec8ad107d077e98d98900ebbb74cb 257 SMART SM00460 64 138 2.3E-5 T 14-10-2018 IPR002931 Transglutaminase-like PhaeoP54_02902 463ec8ad107d077e98d98900ebbb74cb 257 Gene3D G3DSA:3.10.620.30 3 141 3.9E-13 T 14-10-2018 PhaeoP54_02902 463ec8ad107d077e98d98900ebbb74cb 257 Pfam PF01841 Transglutaminase-like superfamily 33 134 2.8E-14 T 14-10-2018 IPR002931 Transglutaminase-like PhaeoP54_02902 463ec8ad107d077e98d98900ebbb74cb 257 SUPERFAMILY SSF54001 19 138 4.49E-20 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily PhaeoP54_01679 1086231766a92bd01be1438c0b250a9b 689 Pfam PF03772 Competence protein 236 512 1.1E-58 T 14-10-2018 IPR004477 ComEC/Rec2-related protein PhaeoP54_01679 1086231766a92bd01be1438c0b250a9b 689 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 256 443 4.0E-27 T 14-10-2018 IPR004477 ComEC/Rec2-related protein PhaeoP54_01679 1086231766a92bd01be1438c0b250a9b 689 Pfam PF13567 Domain of unknown function (DUF4131) 46 194 5.7E-15 T 14-10-2018 IPR025405 Domain of unknown function DUF4131 PhaeoP54_03816 e4d4ce7585a1d9da432e215ececfc7ab 332 Gene3D G3DSA:1.10.150.130 10 102 1.0E-14 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal PhaeoP54_03816 e4d4ce7585a1d9da432e215ececfc7ab 332 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 15 96 4.7E-13 T 14-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 PhaeoP54_03816 e4d4ce7585a1d9da432e215ececfc7ab 332 Pfam PF00589 Phage integrase family 126 298 2.9E-38 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 PhaeoP54_03816 e4d4ce7585a1d9da432e215ececfc7ab 332 Gene3D G3DSA:1.10.443.10 124 305 2.5E-49 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 PhaeoP54_03816 e4d4ce7585a1d9da432e215ececfc7ab 332 SUPERFAMILY SSF47823 14 97 3.53E-6 T 14-10-2018 PhaeoP54_03816 e4d4ce7585a1d9da432e215ececfc7ab 332 SUPERFAMILY SSF56349 120 308 1.91E-50 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 PhaeoP54_00351 bf4018e83bc56f26780b47ec7d8ec067 391 Gene3D G3DSA:2.40.37.10 29 384 2.7E-90 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 PhaeoP54_00351 bf4018e83bc56f26780b47ec7d8ec067 391 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 216 233 - T 14-10-2018 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site PhaeoP54_00351 bf4018e83bc56f26780b47ec7d8ec067 391 Gene3D G3DSA:3.20.20.10 39 276 2.7E-90 T 14-10-2018 IPR029066 PLP-binding barrel PhaeoP54_00351 bf4018e83bc56f26780b47ec7d8ec067 391 SUPERFAMILY SSF50621 250 391 4.19E-30 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 PhaeoP54_00351 bf4018e83bc56f26780b47ec7d8ec067 391 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 60 78 - T 14-10-2018 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site PhaeoP54_00351 bf4018e83bc56f26780b47ec7d8ec067 391 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 275 369 7.4E-12 T 14-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 PhaeoP54_00351 bf4018e83bc56f26780b47ec7d8ec067 391 SUPERFAMILY SSF51419 38 276 9.32E-64 T 14-10-2018 IPR029066 PLP-binding barrel PhaeoP54_00351 bf4018e83bc56f26780b47ec7d8ec067 391 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 182 195 8.7E-21 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 PhaeoP54_00351 bf4018e83bc56f26780b47ec7d8ec067 391 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 264 283 8.7E-21 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 PhaeoP54_00351 bf4018e83bc56f26780b47ec7d8ec067 391 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 60 78 8.7E-21 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 PhaeoP54_00351 bf4018e83bc56f26780b47ec7d8ec067 391 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 80 92 8.7E-21 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 PhaeoP54_00351 bf4018e83bc56f26780b47ec7d8ec067 391 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 41 274 6.8E-54 T 14-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 PhaeoP54_00351 bf4018e83bc56f26780b47ec7d8ec067 391 PRINTS PR01182 Ornithine decarboxylase signature 58 85 7.7E-17 T 14-10-2018 IPR002433 Ornithine decarboxylase GO:0006596 PhaeoP54_00351 bf4018e83bc56f26780b47ec7d8ec067 391 PRINTS PR01182 Ornithine decarboxylase signature 102 126 7.7E-17 T 14-10-2018 IPR002433 Ornithine decarboxylase GO:0006596 PhaeoP54_00351 bf4018e83bc56f26780b47ec7d8ec067 391 PRINTS PR01182 Ornithine decarboxylase signature 132 154 7.7E-17 T 14-10-2018 IPR002433 Ornithine decarboxylase GO:0006596 PhaeoP54_00351 bf4018e83bc56f26780b47ec7d8ec067 391 PRINTS PR01182 Ornithine decarboxylase signature 333 343 7.7E-17 T 14-10-2018 IPR002433 Ornithine decarboxylase GO:0006596 PhaeoP54_01208 06bc6d1cff57b883839e66a6eeb07716 187 SMART SM00450 72 173 5.8E-5 T 14-10-2018 IPR001763 Rhodanese-like domain PhaeoP54_01208 06bc6d1cff57b883839e66a6eeb07716 187 SUPERFAMILY SSF52821 56 182 1.7E-17 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily PhaeoP54_01208 06bc6d1cff57b883839e66a6eeb07716 187 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 34 54 3.9E-5 T 14-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal PhaeoP54_01208 06bc6d1cff57b883839e66a6eeb07716 187 Gene3D G3DSA:3.40.250.10 69 185 8.2E-18 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily PhaeoP54_01118 2f4f624f710876873d8682a13d0316cf 137 Pfam PF01475 Ferric uptake regulator family 13 130 1.9E-39 T 14-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 PhaeoP54_01118 2f4f624f710876873d8682a13d0316cf 137 Gene3D G3DSA:1.10.10.10 1 83 2.2E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_01118 2f4f624f710876873d8682a13d0316cf 137 SUPERFAMILY SSF46785 4 132 1.83E-36 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_01118 2f4f624f710876873d8682a13d0316cf 137 Gene3D G3DSA:3.30.1490.190 85 137 3.8E-19 T 14-10-2018 PhaeoP54_03654 627e99c280f07cf802f7c671e49e0c24 359 PRINTS PR00313 NodO calcium binding signature 174 185 7.6E-11 T 14-10-2018 PhaeoP54_03654 627e99c280f07cf802f7c671e49e0c24 359 PRINTS PR00313 NodO calcium binding signature 186 194 7.6E-11 T 14-10-2018 PhaeoP54_03654 627e99c280f07cf802f7c671e49e0c24 359 PRINTS PR00313 NodO calcium binding signature 249 258 7.6E-11 T 14-10-2018 PhaeoP54_03654 627e99c280f07cf802f7c671e49e0c24 359 PRINTS PR00313 NodO calcium binding signature 240 248 7.6E-11 T 14-10-2018 PhaeoP54_03654 627e99c280f07cf802f7c671e49e0c24 359 SUPERFAMILY SSF51120 135 235 1.15E-19 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal PhaeoP54_03654 627e99c280f07cf802f7c671e49e0c24 359 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 245 263 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site PhaeoP54_03654 627e99c280f07cf802f7c671e49e0c24 359 Gene3D G3DSA:2.150.10.10 164 230 1.1E-14 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal PhaeoP54_03654 627e99c280f07cf802f7c671e49e0c24 359 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 263 281 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site PhaeoP54_03654 627e99c280f07cf802f7c671e49e0c24 359 SUPERFAMILY SSF51120 218 359 9.29E-25 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal PhaeoP54_03654 627e99c280f07cf802f7c671e49e0c24 359 Gene3D G3DSA:2.150.10.10 231 359 6.7E-28 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal PhaeoP54_03654 627e99c280f07cf802f7c671e49e0c24 359 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 204 220 5.8 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_03654 627e99c280f07cf802f7c671e49e0c24 359 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 185 202 0.0052 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_03654 627e99c280f07cf802f7c671e49e0c24 359 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 137 153 0.67 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_03654 627e99c280f07cf802f7c671e49e0c24 359 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 168 184 0.0055 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_03654 627e99c280f07cf802f7c671e49e0c24 359 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 258 274 0.013 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_03654 627e99c280f07cf802f7c671e49e0c24 359 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 222 238 0.068 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_03654 627e99c280f07cf802f7c671e49e0c24 359 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 287 296 18.0 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_03654 627e99c280f07cf802f7c671e49e0c24 359 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 240 256 8.7E-4 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_03654 627e99c280f07cf802f7c671e49e0c24 359 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 254 272 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site PhaeoP54_01636 d9affc2e46aad9db7d31a563a55281ae 228 ProSitePatterns PS00211 ABC transporters family signature. 130 144 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PhaeoP54_01636 d9affc2e46aad9db7d31a563a55281ae 228 SUPERFAMILY SSF52540 2 219 1.66E-53 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_01636 d9affc2e46aad9db7d31a563a55281ae 228 Pfam PF00005 ABC transporter 20 157 9.2E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PhaeoP54_01636 d9affc2e46aad9db7d31a563a55281ae 228 SMART SM00382 27 207 1.4E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_01636 d9affc2e46aad9db7d31a563a55281ae 228 Gene3D G3DSA:3.40.50.300 1 228 2.9E-54 T 14-10-2018 PhaeoP54_00485 448fbf2aa1d69ac618c815a8f5cc5ad9 760 Gene3D G3DSA:1.20.1480.50 336 430 3.4E-14 T 14-10-2018 PhaeoP54_00485 448fbf2aa1d69ac618c815a8f5cc5ad9 760 Pfam PF02743 Cache domain 52 332 6.2E-13 T 14-10-2018 IPR033479 Double Cache domain 1 PhaeoP54_00485 448fbf2aa1d69ac618c815a8f5cc5ad9 760 SUPERFAMILY SSF58104 401 734 3.66E-62 T 14-10-2018 PhaeoP54_00485 448fbf2aa1d69ac618c815a8f5cc5ad9 760 Pfam PF00672 HAMP domain 370 418 1.6E-9 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 PhaeoP54_00485 448fbf2aa1d69ac618c815a8f5cc5ad9 760 Gene3D G3DSA:3.30.450.20 219 335 8.4E-6 T 14-10-2018 PhaeoP54_00485 448fbf2aa1d69ac618c815a8f5cc5ad9 760 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 661 690 1.5E-39 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 PhaeoP54_00485 448fbf2aa1d69ac618c815a8f5cc5ad9 760 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 507 536 1.5E-39 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 PhaeoP54_00485 448fbf2aa1d69ac618c815a8f5cc5ad9 760 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 584 611 1.5E-39 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 PhaeoP54_00485 448fbf2aa1d69ac618c815a8f5cc5ad9 760 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 613 642 1.5E-39 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 PhaeoP54_00485 448fbf2aa1d69ac618c815a8f5cc5ad9 760 SMART SM00304 370 423 3.2E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 PhaeoP54_00485 448fbf2aa1d69ac618c815a8f5cc5ad9 760 SMART SM00304 433 485 42.0 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 PhaeoP54_00485 448fbf2aa1d69ac618c815a8f5cc5ad9 760 SMART SM00283 486 733 1.3E-81 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 PhaeoP54_00485 448fbf2aa1d69ac618c815a8f5cc5ad9 760 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 548 700 5.3E-45 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 PhaeoP54_00485 448fbf2aa1d69ac618c815a8f5cc5ad9 760 Gene3D G3DSA:1.10.287.950 437 735 2.5E-69 T 14-10-2018 PhaeoP54_01576 b082837b826bba037cbf6dbfd3bc4777 262 SUPERFAMILY SSF52540 2 249 9.77E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_01576 b082837b826bba037cbf6dbfd3bc4777 262 Gene3D G3DSA:3.40.50.300 1 250 2.0E-60 T 14-10-2018 PhaeoP54_01576 b082837b826bba037cbf6dbfd3bc4777 262 SMART SM00382 26 248 8.9E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_01576 b082837b826bba037cbf6dbfd3bc4777 262 Pfam PF00005 ABC transporter 18 175 2.5E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PhaeoP54_01576 b082837b826bba037cbf6dbfd3bc4777 262 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PhaeoP54_01576 b082837b826bba037cbf6dbfd3bc4777 262 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 227 249 6.4E-8 T 14-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal PhaeoP54_01005 cf421426be89e42443cb783dca029a73 125 Gene3D G3DSA:3.40.50.300 4 125 2.7E-14 T 14-10-2018 PhaeoP54_01005 cf421426be89e42443cb783dca029a73 125 SUPERFAMILY SSF52540 16 123 2.16E-8 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_01658 065faa20bcd9936b4948ae91f2c5be77 947 SMART SM00052 665 909 3.1E-68 T 14-10-2018 IPR001633 EAL domain PhaeoP54_01658 065faa20bcd9936b4948ae91f2c5be77 947 Gene3D G3DSA:3.20.20.450 666 918 2.8E-71 T 14-10-2018 IPR035919 EAL domain superfamily PhaeoP54_01658 065faa20bcd9936b4948ae91f2c5be77 947 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 495 653 1.3E-30 T 14-10-2018 IPR000160 GGDEF domain PhaeoP54_01658 065faa20bcd9936b4948ae91f2c5be77 947 SUPERFAMILY SSF141868 671 915 6.28E-66 T 14-10-2018 IPR035919 EAL domain superfamily PhaeoP54_01658 065faa20bcd9936b4948ae91f2c5be77 947 SUPERFAMILY SSF55073 502 657 7.77E-37 T 14-10-2018 IPR029787 Nucleotide cyclase PhaeoP54_01658 065faa20bcd9936b4948ae91f2c5be77 947 Pfam PF00563 EAL domain 671 904 3.0E-61 T 14-10-2018 IPR001633 EAL domain PhaeoP54_01658 065faa20bcd9936b4948ae91f2c5be77 947 Pfam PF00909 Ammonium Transporter Family 7 411 2.0E-94 T 14-10-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 PhaeoP54_01658 065faa20bcd9936b4948ae91f2c5be77 947 Pfam PF00990 Diguanylate cyclase, GGDEF domain 497 650 6.8E-36 T 14-10-2018 IPR000160 GGDEF domain PhaeoP54_01658 065faa20bcd9936b4948ae91f2c5be77 947 Gene3D G3DSA:3.30.70.270 482 656 3.2E-41 T 14-10-2018 PhaeoP54_01658 065faa20bcd9936b4948ae91f2c5be77 947 SMART SM00267 486 655 2.6E-41 T 14-10-2018 IPR000160 GGDEF domain PhaeoP54_01658 065faa20bcd9936b4948ae91f2c5be77 947 SUPERFAMILY SSF111352 3 395 3.66E-90 T 14-10-2018 PhaeoP54_01658 065faa20bcd9936b4948ae91f2c5be77 947 Gene3D G3DSA:1.10.3430.10 1 429 2.8E-116 T 14-10-2018 IPR029020 Ammonium/urea transporter PhaeoP54_01396 8a3fa356141f82aeddf41aa65e83d8de 480 SUPERFAMILY SSF161098 203 463 2.76E-12 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_01396 8a3fa356141f82aeddf41aa65e83d8de 480 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 226 473 1.5E-13 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PhaeoP54_01910 6080862667eda595053b00898bed17d8 267 SUPERFAMILY SSF161098 5 263 2.18E-51 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_01910 6080862667eda595053b00898bed17d8 267 Gene3D G3DSA:1.10.3720.10 8 266 5.2E-44 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_01910 6080862667eda595053b00898bed17d8 267 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 94 260 2.0E-12 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PhaeoP54_01300 589a983803a538420ab39b517e1c6664 288 Gene3D G3DSA:1.10.3720.10 49 286 7.2E-54 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_01300 589a983803a538420ab39b517e1c6664 288 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 84 287 1.5E-16 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PhaeoP54_01300 589a983803a538420ab39b517e1c6664 288 SUPERFAMILY SSF161098 53 276 8.63E-49 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_01078 e1ea8db4a65c3f928dab19207ee9d584 279 SMART SM00382 25 183 2.0E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_01078 e1ea8db4a65c3f928dab19207ee9d584 279 Gene3D G3DSA:3.40.50.300 2 208 6.7E-29 T 14-10-2018 PhaeoP54_01078 e1ea8db4a65c3f928dab19207ee9d584 279 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 113 131 9.4E-6 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 PhaeoP54_01078 e1ea8db4a65c3f928dab19207ee9d584 279 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 29 47 9.4E-6 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 PhaeoP54_01078 e1ea8db4a65c3f928dab19207ee9d584 279 SUPERFAMILY SSF52540 7 268 1.93E-36 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_01078 e1ea8db4a65c3f928dab19207ee9d584 279 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 29 175 3.0E-14 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 PhaeoP54_00646 4ada9f2434f950530e94669377cc3ab4 553 Gene3D G3DSA:1.10.101.10 64 129 1.1E-6 T 14-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 PhaeoP54_00646 4ada9f2434f950530e94669377cc3ab4 553 SUPERFAMILY SSF47090 64 122 1.02E-9 T 14-10-2018 IPR036365 PGBD-like superfamily PhaeoP54_00646 4ada9f2434f950530e94669377cc3ab4 553 Pfam PF01471 Putative peptidoglycan binding domain 69 113 5.1E-8 T 14-10-2018 IPR002477 Peptidoglycan binding-like PhaeoP54_02782 0de800d228467fd7835d00b0682f2626 386 SUPERFAMILY SSF53067 153 383 8.31E-61 T 14-10-2018 PhaeoP54_02782 0de800d228467fd7835d00b0682f2626 386 Gene3D G3DSA:3.30.420.40 195 385 2.3E-59 T 14-10-2018 PhaeoP54_02782 0de800d228467fd7835d00b0682f2626 386 TIGRFAM TIGR00016 ackA: acetate kinase 7 382 3.5E-104 T 14-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 PhaeoP54_02782 0de800d228467fd7835d00b0682f2626 386 Hamap MF_00020 Acetate kinase [ackA]. 1 386 129.735 T 14-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 PhaeoP54_02782 0de800d228467fd7835d00b0682f2626 386 Gene3D G3DSA:3.30.420.40 7 190 3.1E-59 T 14-10-2018 PhaeoP54_02782 0de800d228467fd7835d00b0682f2626 386 Pfam PF00871 Acetokinase family 9 376 3.5E-99 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 PhaeoP54_02782 0de800d228467fd7835d00b0682f2626 386 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 9 20 - T 14-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 PhaeoP54_02782 0de800d228467fd7835d00b0682f2626 386 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 198 215 - T 14-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 PhaeoP54_02782 0de800d228467fd7835d00b0682f2626 386 SUPERFAMILY SSF53067 8 190 3.32E-54 T 14-10-2018 PhaeoP54_02782 0de800d228467fd7835d00b0682f2626 386 PIRSF PIRSF000722 5 385 2.0E-119 T 14-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 PhaeoP54_02782 0de800d228467fd7835d00b0682f2626 386 PRINTS PR00471 Acetate kinase family signature 290 303 2.2E-31 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 PhaeoP54_02782 0de800d228467fd7835d00b0682f2626 386 PRINTS PR00471 Acetate kinase family signature 312 328 2.2E-31 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 PhaeoP54_02782 0de800d228467fd7835d00b0682f2626 386 PRINTS PR00471 Acetate kinase family signature 198 219 2.2E-31 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 PhaeoP54_02782 0de800d228467fd7835d00b0682f2626 386 PRINTS PR00471 Acetate kinase family signature 9 20 2.2E-31 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 PhaeoP54_02782 0de800d228467fd7835d00b0682f2626 386 PRINTS PR00471 Acetate kinase family signature 169 182 2.2E-31 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 PhaeoP54_02782 0de800d228467fd7835d00b0682f2626 386 PRINTS PR00471 Acetate kinase family signature 364 376 2.2E-31 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 PhaeoP54_03220 195a4209bc3d7fdf7073c8263350a197 474 Pfam PF00675 Insulinase (Peptidase family M16) 65 210 1.9E-30 T 14-10-2018 IPR011765 Peptidase M16, N-terminal PhaeoP54_03220 195a4209bc3d7fdf7073c8263350a197 474 Gene3D G3DSA:3.30.830.10 274 467 1.3E-38 T 14-10-2018 PhaeoP54_03220 195a4209bc3d7fdf7073c8263350a197 474 Gene3D G3DSA:3.30.830.10 49 270 1.1E-73 T 14-10-2018 PhaeoP54_03220 195a4209bc3d7fdf7073c8263350a197 474 Pfam PF05193 Peptidase M16 inactive domain 220 402 1.8E-25 T 14-10-2018 IPR007863 Peptidase M16, C-terminal PhaeoP54_03220 195a4209bc3d7fdf7073c8263350a197 474 SUPERFAMILY SSF63411 277 469 2.83E-34 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 PhaeoP54_03220 195a4209bc3d7fdf7073c8263350a197 474 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 85 108 - T 14-10-2018 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 PhaeoP54_03220 195a4209bc3d7fdf7073c8263350a197 474 SUPERFAMILY SSF63411 55 265 3.12E-57 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 PhaeoP54_01067 4e79bd00d7f8f4e764f0a5e97ab9552a 355 Pfam PF13704 Glycosyl transferase family 2 10 109 1.5E-20 T 14-10-2018 PhaeoP54_01067 4e79bd00d7f8f4e764f0a5e97ab9552a 355 SUPERFAMILY SSF53448 5 133 7.88E-12 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PhaeoP54_00990 640310d8fd2f01da7fa851571866d6e0 335 Pfam PF04055 Radical SAM superfamily 18 180 1.4E-24 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 PhaeoP54_00990 640310d8fd2f01da7fa851571866d6e0 335 Pfam PF06463 Molybdenum Cofactor Synthesis C 186 314 3.1E-36 T 14-10-2018 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 PhaeoP54_00990 640310d8fd2f01da7fa851571866d6e0 335 Gene3D G3DSA:3.20.20.70 2 335 4.6E-81 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PhaeoP54_00990 640310d8fd2f01da7fa851571866d6e0 335 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 20 31 - T 14-10-2018 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 PhaeoP54_00990 640310d8fd2f01da7fa851571866d6e0 335 SMART SM00729 14 219 2.4E-4 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 PhaeoP54_00990 640310d8fd2f01da7fa851571866d6e0 335 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 5 335 6.3E-109 T 14-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 PhaeoP54_00990 640310d8fd2f01da7fa851571866d6e0 335 Hamap MF_01225_B GTP 3',8-cyclase [moaA]. 5 335 38.639 T 14-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 PhaeoP54_00990 640310d8fd2f01da7fa851571866d6e0 335 Pfam PF13353 4Fe-4S single cluster domain 21 123 6.4E-9 T 14-10-2018 PhaeoP54_00990 640310d8fd2f01da7fa851571866d6e0 335 SUPERFAMILY SSF102114 4 303 2.35E-74 T 14-10-2018 PhaeoP54_00451 29bdf1c9ca398799350ed728e2f19e25 393 Pfam PF02772 S-adenosylmethionine synthetase, central domain 122 238 1.3E-36 T 14-10-2018 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 PhaeoP54_00451 29bdf1c9ca398799350ed728e2f19e25 393 SUPERFAMILY SSF55973 5 116 1.41E-35 T 14-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 PhaeoP54_00451 29bdf1c9ca398799350ed728e2f19e25 393 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 7 392 9.6E-148 T 14-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 PhaeoP54_00451 29bdf1c9ca398799350ed728e2f19e25 393 SUPERFAMILY SSF55973 240 391 9.81E-64 T 14-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 PhaeoP54_00451 29bdf1c9ca398799350ed728e2f19e25 393 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 123 133 - T 14-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 PhaeoP54_00451 29bdf1c9ca398799350ed728e2f19e25 393 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 266 274 - T 14-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 PhaeoP54_00451 29bdf1c9ca398799350ed728e2f19e25 393 Gene3D G3DSA:3.30.300.10 109 384 8.1E-158 T 14-10-2018 PhaeoP54_00451 29bdf1c9ca398799350ed728e2f19e25 393 SUPERFAMILY SSF55973 119 239 1.0E-43 T 14-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 PhaeoP54_00451 29bdf1c9ca398799350ed728e2f19e25 393 Gene3D G3DSA:3.30.300.10 8 240 8.1E-158 T 14-10-2018 PhaeoP54_00451 29bdf1c9ca398799350ed728e2f19e25 393 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 4 393 49.285 T 14-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 PhaeoP54_00451 29bdf1c9ca398799350ed728e2f19e25 393 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 240 382 3.3E-64 T 14-10-2018 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 PhaeoP54_00451 29bdf1c9ca398799350ed728e2f19e25 393 Gene3D G3DSA:3.30.300.10 13 277 8.1E-158 T 14-10-2018 PhaeoP54_00451 29bdf1c9ca398799350ed728e2f19e25 393 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 5 108 6.1E-36 T 14-10-2018 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 PhaeoP54_00451 29bdf1c9ca398799350ed728e2f19e25 393 PIRSF PIRSF000497 1 393 1.4E-154 T 14-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 PhaeoP54_03466 817c1f74d9e333e9cead2b727da50002 121 Pfam PF09585 Conserved hypothetical protein (Lin0512_fam) 5 107 1.6E-33 T 14-10-2018 IPR011719 Conserved hypothetical protein CHP02058 PhaeoP54_03466 817c1f74d9e333e9cead2b727da50002 121 TIGRFAM TIGR02058 lin0512_fam: conserved hypothetical protein 4 90 2.2E-17 T 14-10-2018 IPR011719 Conserved hypothetical protein CHP02058 PhaeoP54_03466 817c1f74d9e333e9cead2b727da50002 121 Gene3D G3DSA:3.30.1330.20 1 112 1.1E-27 T 14-10-2018 IPR037103 Tubulin/FtsZ, C-terminal domain superfamily Reactome: R-HSA-380320 PhaeoP54_02363 389b8520f9ffebf7c9a6d9bd86587139 313 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 136 156 - T 14-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 PhaeoP54_02363 389b8520f9ffebf7c9a6d9bd86587139 313 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 298 7.6E-49 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PhaeoP54_02363 389b8520f9ffebf7c9a6d9bd86587139 313 SUPERFAMILY SSF51905 1 309 1.51E-50 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PhaeoP54_02363 389b8520f9ffebf7c9a6d9bd86587139 313 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 144 168 3.3E-73 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PhaeoP54_02363 389b8520f9ffebf7c9a6d9bd86587139 313 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 8 30 3.3E-73 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PhaeoP54_02363 389b8520f9ffebf7c9a6d9bd86587139 313 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 196 212 3.3E-73 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PhaeoP54_02363 389b8520f9ffebf7c9a6d9bd86587139 313 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 41 56 3.3E-73 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PhaeoP54_02363 389b8520f9ffebf7c9a6d9bd86587139 313 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 272 290 3.3E-73 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PhaeoP54_02363 389b8520f9ffebf7c9a6d9bd86587139 313 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 129 141 3.3E-73 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PhaeoP54_02363 389b8520f9ffebf7c9a6d9bd86587139 313 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 237 258 3.3E-73 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PhaeoP54_02363 389b8520f9ffebf7c9a6d9bd86587139 313 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 61 71 3.3E-73 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PhaeoP54_02363 389b8520f9ffebf7c9a6d9bd86587139 313 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 107 115 3.3E-73 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PhaeoP54_02363 389b8520f9ffebf7c9a6d9bd86587139 313 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 8 309 1.2E-119 T 14-10-2018 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00450+1.8.1.9 PhaeoP54_02363 389b8520f9ffebf7c9a6d9bd86587139 313 Gene3D G3DSA:3.50.50.60 123 248 4.9E-115 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PhaeoP54_02363 389b8520f9ffebf7c9a6d9bd86587139 313 Gene3D G3DSA:3.50.50.60 9 307 4.9E-115 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PhaeoP54_02363 389b8520f9ffebf7c9a6d9bd86587139 313 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 262 284 8.2E-39 T 14-10-2018 PhaeoP54_02363 389b8520f9ffebf7c9a6d9bd86587139 313 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 235 251 8.2E-39 T 14-10-2018 PhaeoP54_02363 389b8520f9ffebf7c9a6d9bd86587139 313 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 106 124 8.2E-39 T 14-10-2018 PhaeoP54_02363 389b8520f9ffebf7c9a6d9bd86587139 313 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 148 166 8.2E-39 T 14-10-2018 PhaeoP54_02363 389b8520f9ffebf7c9a6d9bd86587139 313 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 8.2E-39 T 14-10-2018 PhaeoP54_03383 1b78b366b2cb31ba19693a6900ebafea 327 Pfam PF01370 NAD dependent epimerase/dehydratase family 4 252 3.3E-53 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 PhaeoP54_03383 1b78b366b2cb31ba19693a6900ebafea 327 Gene3D G3DSA:3.90.25.10 173 306 5.7E-117 T 14-10-2018 PhaeoP54_03383 1b78b366b2cb31ba19693a6900ebafea 327 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 4 321 7.2E-122 T 14-10-2018 IPR005886 UDP-glucose 4-epimerase GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-5609977|Reactome: R-HSA-70370 PhaeoP54_03383 1b78b366b2cb31ba19693a6900ebafea 327 Gene3D G3DSA:3.40.50.720 4 252 5.7E-117 T 14-10-2018 PhaeoP54_03383 1b78b366b2cb31ba19693a6900ebafea 327 SUPERFAMILY SSF51735 3 321 1.88E-84 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PhaeoP54_01507 9cbff4d5ebcd077f28412cb1e082ae75 391 Gene3D G3DSA:3.30.1540.10 225 315 3.1E-127 T 14-10-2018 PhaeoP54_01507 9cbff4d5ebcd077f28412cb1e082ae75 391 Pfam PF02515 CoA-transferase family III 5 371 5.2E-125 T 14-10-2018 IPR003673 CoA-transferase family III GO:0003824 PhaeoP54_01507 9cbff4d5ebcd077f28412cb1e082ae75 391 SUPERFAMILY SSF89796 3 380 8.37E-120 T 14-10-2018 IPR023606 CoA-transferase family III domain superfamily PhaeoP54_01507 9cbff4d5ebcd077f28412cb1e082ae75 391 Gene3D G3DSA:3.40.50.10540 4 335 3.1E-127 T 14-10-2018 IPR023606 CoA-transferase family III domain superfamily PhaeoP54_00910 6f4df519a6b83254148e99a6974f1cec 1146 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 290 297 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 PhaeoP54_00910 6f4df519a6b83254148e99a6974f1cec 1146 PIRSF PIRSF001594 1 1146 0.0 T 14-10-2018 IPR005930 Pyruvate carboxylase GO:0004736|GO:0005524|GO:0006090|GO:0006094|GO:0009374 KEGG: 00020+6.4.1.1|KEGG: 00620+6.4.1.1|KEGG: 00720+6.4.1.1|MetaCyc: PWY-5750|MetaCyc: PWY-6142|MetaCyc: PWY-6146|Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 PhaeoP54_00910 6f4df519a6b83254148e99a6974f1cec 1146 Pfam PF00682 HMGL-like 536 804 3.4E-27 T 14-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 PhaeoP54_00910 6f4df519a6b83254148e99a6974f1cec 1146 Gene3D G3DSA:3.30.470.130 1 460 8.0E-193 T 14-10-2018 PhaeoP54_00910 6f4df519a6b83254148e99a6974f1cec 1146 Gene3D G3DSA:3.10.600.10 510 1060 3.2E-274 T 14-10-2018 PhaeoP54_00910 6f4df519a6b83254148e99a6974f1cec 1146 Pfam PF02785 Biotin carboxylase C-terminal domain 345 453 6.9E-33 T 14-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 PhaeoP54_00910 6f4df519a6b83254148e99a6974f1cec 1146 SUPERFAMILY SSF89000 833 1011 4.32E-54 T 14-10-2018 PhaeoP54_00910 6f4df519a6b83254148e99a6974f1cec 1146 TIGRFAM TIGR01235 pyruv_carbox: pyruvate carboxylase 6 1146 0.0 T 14-10-2018 IPR005930 Pyruvate carboxylase GO:0004736|GO:0005524|GO:0006090|GO:0006094|GO:0009374 KEGG: 00020+6.4.1.1|KEGG: 00620+6.4.1.1|KEGG: 00720+6.4.1.1|MetaCyc: PWY-5750|MetaCyc: PWY-6142|MetaCyc: PWY-6146|Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 PhaeoP54_00910 6f4df519a6b83254148e99a6974f1cec 1146 SMART SM00878 345 452 7.8E-46 T 14-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 PhaeoP54_00910 6f4df519a6b83254148e99a6974f1cec 1146 Pfam PF00364 Biotin-requiring enzyme 1079 1145 5.1E-13 T 14-10-2018 IPR000089 Biotin/lipoyl attachment PhaeoP54_00910 6f4df519a6b83254148e99a6974f1cec 1146 SUPERFAMILY SSF51246 340 458 8.37E-37 T 14-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 PhaeoP54_00910 6f4df519a6b83254148e99a6974f1cec 1146 SUPERFAMILY SSF51230 1067 1146 2.09E-20 T 14-10-2018 IPR011053 Single hybrid motif PhaeoP54_00910 6f4df519a6b83254148e99a6974f1cec 1146 Gene3D G3DSA:1.10.10.60 951 997 3.2E-274 T 14-10-2018 PhaeoP54_00910 6f4df519a6b83254148e99a6974f1cec 1146 SUPERFAMILY SSF52440 3 116 7.19E-44 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily PhaeoP54_00910 6f4df519a6b83254148e99a6974f1cec 1146 SUPERFAMILY SSF51569 526 836 2.78E-85 T 14-10-2018 PhaeoP54_00910 6f4df519a6b83254148e99a6974f1cec 1146 Gene3D G3DSA:3.10.600.10 465 503 1.9E-5 T 14-10-2018 PhaeoP54_00910 6f4df519a6b83254148e99a6974f1cec 1146 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 118 327 1.7E-69 T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 PhaeoP54_00910 6f4df519a6b83254148e99a6974f1cec 1146 Pfam PF00289 Biotin carboxylase, N-terminal domain 4 113 2.5E-40 T 14-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 PhaeoP54_00910 6f4df519a6b83254148e99a6974f1cec 1146 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 1102 1119 - T 14-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 PhaeoP54_00910 6f4df519a6b83254148e99a6974f1cec 1146 Pfam PF02436 Conserved carboxylase domain 828 1028 8.8E-72 T 14-10-2018 IPR003379 Carboxylase, conserved domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 PhaeoP54_00910 6f4df519a6b83254148e99a6974f1cec 1146 Gene3D G3DSA:3.20.20.70 511 819 3.2E-274 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PhaeoP54_00910 6f4df519a6b83254148e99a6974f1cec 1146 Gene3D G3DSA:1.10.472.90 820 950 3.2E-274 T 14-10-2018 PhaeoP54_00910 6f4df519a6b83254148e99a6974f1cec 1146 SUPERFAMILY SSF56059 86 365 2.47E-63 T 14-10-2018 PhaeoP54_00910 6f4df519a6b83254148e99a6974f1cec 1146 Gene3D G3DSA:2.40.50.100 1069 1144 5.2E-22 T 14-10-2018 PhaeoP54_00910 6f4df519a6b83254148e99a6974f1cec 1146 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 156 170 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 PhaeoP54_02272 36dd8a72c44793c5dab2c99ddc25dd39 120 PRINTS PR01651 Protein-export SecG membrane protein signature 3 23 9.7E-10 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 PhaeoP54_02272 36dd8a72c44793c5dab2c99ddc25dd39 120 PRINTS PR01651 Protein-export SecG membrane protein signature 23 37 9.7E-10 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 PhaeoP54_02272 36dd8a72c44793c5dab2c99ddc25dd39 120 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 3 70 7.2E-20 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 PhaeoP54_02272 36dd8a72c44793c5dab2c99ddc25dd39 120 Pfam PF03840 Preprotein translocase SecG subunit 4 70 6.9E-17 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 PhaeoP54_02534 f841de83fd5bbb139d4b08ade2de5703 183 Pfam PF03734 L,D-transpeptidase catalytic domain 48 182 8.9E-16 T 14-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 PhaeoP54_02534 f841de83fd5bbb139d4b08ade2de5703 183 Gene3D G3DSA:2.40.440.10 14 183 3.8E-38 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like PhaeoP54_02534 f841de83fd5bbb139d4b08ade2de5703 183 SUPERFAMILY SSF141523 40 182 1.24E-29 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like PhaeoP54_01239 764983ce9ca523e9316e898019c576fb 210 SUPERFAMILY SSF55729 2 193 1.52E-73 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase PhaeoP54_01239 764983ce9ca523e9316e898019c576fb 210 Gene3D G3DSA:3.40.630.70 34 203 2.9E-57 T 14-10-2018 PhaeoP54_01239 764983ce9ca523e9316e898019c576fb 210 Pfam PF03588 Leucyl/phenylalanyl-tRNA protein transferase 6 172 2.6E-63 T 14-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 PhaeoP54_01239 764983ce9ca523e9316e898019c576fb 210 TIGRFAM TIGR00667 aat: leucyl/phenylalanyl-tRNA--protein transferase 9 193 1.4E-55 T 14-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 PhaeoP54_01239 764983ce9ca523e9316e898019c576fb 210 Hamap MF_00688 Leucyl/phenylalanyl-tRNA--protein transferase [aat]. 1 210 78.2 T 14-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 PhaeoP54_03680 00d25caaa9fa7dbed47ff1949ee0ac2f 185 Pfam PF04752 ChaC-like protein 5 173 3.4E-46 T 14-10-2018 IPR006840 Glutathione-specific gamma-glutamylcyclotransferase GO:0003839|GO:0006751 KEGG: 00480+4.3.2.7|MetaCyc: PWY-7942|Reactome: R-HSA-174403 PhaeoP54_03680 00d25caaa9fa7dbed47ff1949ee0ac2f 185 SUPERFAMILY SSF110857 5 121 2.09E-9 T 14-10-2018 IPR036568 Gamma-glutamyl cyclotransferase-like superfamily PhaeoP54_03680 00d25caaa9fa7dbed47ff1949ee0ac2f 185 Gene3D G3DSA:3.10.490.10 1 183 3.1E-11 T 14-10-2018 PhaeoP54_02194 145f6773fe2484dda98503fbba21fe69 664 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 170 339 1.4E-21 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PhaeoP54_02194 145f6773fe2484dda98503fbba21fe69 664 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 488 649 3.8E-20 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PhaeoP54_02194 145f6773fe2484dda98503fbba21fe69 664 Gene3D G3DSA:1.10.3720.10 141 339 1.3E-27 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_02194 145f6773fe2484dda98503fbba21fe69 664 Gene3D G3DSA:1.10.3720.10 461 653 2.7E-29 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_02194 145f6773fe2484dda98503fbba21fe69 664 SUPERFAMILY SSF161098 465 649 7.59E-34 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_02194 145f6773fe2484dda98503fbba21fe69 664 SUPERFAMILY SSF161098 150 332 1.57E-32 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_03783 277fe37aafcc5e9f54546277c2abd933 124 SMART SM00448 3 116 3.5E-34 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PhaeoP54_03783 277fe37aafcc5e9f54546277c2abd933 124 Pfam PF00072 Response regulator receiver domain 5 116 2.0E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PhaeoP54_03783 277fe37aafcc5e9f54546277c2abd933 124 SUPERFAMILY SSF52172 3 120 6.26E-35 T 14-10-2018 IPR011006 CheY-like superfamily PhaeoP54_03783 277fe37aafcc5e9f54546277c2abd933 124 Gene3D G3DSA:3.40.50.12740 1 124 3.1E-35 T 14-10-2018 PhaeoP54_01933 5f5d0e6f7d8b188b8306bc0a9c016649 186 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 28 186 1.1E-52 T 14-10-2018 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 PhaeoP54_01933 5f5d0e6f7d8b188b8306bc0a9c016649 186 SUPERFAMILY SSF55021 28 103 3.9E-19 T 14-10-2018 PhaeoP54_01933 5f5d0e6f7d8b188b8306bc0a9c016649 186 Pfam PF10369 Small subunit of acetolactate synthase 112 185 1.7E-24 T 14-10-2018 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 PhaeoP54_01933 5f5d0e6f7d8b188b8306bc0a9c016649 186 Pfam PF01842 ACT domain 29 90 4.4E-12 T 14-10-2018 IPR002912 ACT domain PhaeoP54_01933 5f5d0e6f7d8b188b8306bc0a9c016649 186 SUPERFAMILY SSF55021 108 185 2.75E-25 T 14-10-2018 PhaeoP54_01933 5f5d0e6f7d8b188b8306bc0a9c016649 186 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 28 103 1.0E-35 T 14-10-2018 PhaeoP54_01933 5f5d0e6f7d8b188b8306bc0a9c016649 186 Gene3D G3DSA:3.30.70.1150 108 184 2.6E-25 T 14-10-2018 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal PhaeoP54_01933 5f5d0e6f7d8b188b8306bc0a9c016649 186 Gene3D G3DSA:3.30.70.260 25 106 1.4E-31 T 14-10-2018 PhaeoP54_02866 8781252ea06df5137a348a8a8e6900fd 482 Pfam PF02913 FAD linked oxidases, C-terminal domain 227 465 2.0E-58 T 14-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 PhaeoP54_02866 8781252ea06df5137a348a8a8e6900fd 482 Pfam PF01565 FAD binding domain 53 190 1.3E-32 T 14-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 PhaeoP54_02866 8781252ea06df5137a348a8a8e6900fd 482 Gene3D G3DSA:1.10.45.10 426 466 2.7E-7 T 14-10-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 PhaeoP54_02866 8781252ea06df5137a348a8a8e6900fd 482 Gene3D G3DSA:3.30.465.40 13 233 1.1E-58 T 14-10-2018 PhaeoP54_02866 8781252ea06df5137a348a8a8e6900fd 482 SUPERFAMILY SSF55103 201 467 1.55E-65 T 14-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 PhaeoP54_02866 8781252ea06df5137a348a8a8e6900fd 482 Gene3D G3DSA:3.30.70.2740 345 425 7.4E-6 T 14-10-2018 PhaeoP54_02866 8781252ea06df5137a348a8a8e6900fd 482 SUPERFAMILY SSF56176 20 227 2.76E-62 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 PhaeoP54_03513 ad111e78dc11e63f07a12dc7261b7cd7 160 Pfam PF03748 Flagellar basal body-associated protein FliL 57 156 1.2E-5 T 14-10-2018 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 PhaeoP54_02027 ea81bbf31f321bf495b15228444d50f8 158 Gene3D G3DSA:3.40.430.10 1 158 2.5E-46 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 PhaeoP54_02027 ea81bbf31f321bf495b15228444d50f8 158 SUPERFAMILY SSF53597 1 157 2.49E-45 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 PhaeoP54_02027 ea81bbf31f321bf495b15228444d50f8 158 PIRSF PIRSF000194 1 158 2.9E-44 T 14-10-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0046654|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614 PhaeoP54_02027 ea81bbf31f321bf495b15228444d50f8 158 Pfam PF00186 Dihydrofolate reductase 1 147 1.6E-45 T 14-10-2018 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0046654|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 PhaeoP54_02027 ea81bbf31f321bf495b15228444d50f8 158 ProSitePatterns PS00075 Dihydrofolate reductase (DHFR) domain signature. 13 35 - T 14-10-2018 IPR017925 Dihydrofolate reductase conserved site GO:0004146|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-1474151|Reactome: R-HSA-196757|Reactome: R-HSA-539107 PhaeoP54_02027 ea81bbf31f321bf495b15228444d50f8 158 PRINTS PR00070 Dihydrofolate reductase signature 13 23 8.5E-13 T 14-10-2018 PhaeoP54_02027 ea81bbf31f321bf495b15228444d50f8 158 PRINTS PR00070 Dihydrofolate reductase signature 91 105 8.5E-13 T 14-10-2018 PhaeoP54_02027 ea81bbf31f321bf495b15228444d50f8 158 PRINTS PR00070 Dihydrofolate reductase signature 27 35 8.5E-13 T 14-10-2018 PhaeoP54_02027 ea81bbf31f321bf495b15228444d50f8 158 PRINTS PR00070 Dihydrofolate reductase signature 40 51 8.5E-13 T 14-10-2018 PhaeoP54_01768 cefbb67b287c1175ddd8530473e26a77 210 TIGRFAM TIGR02217 chp_TIGR02217: TIGR02217 family protein 2 209 1.1E-79 T 14-10-2018 IPR011740 Protein of unknown function DUF2460 PhaeoP54_01768 cefbb67b287c1175ddd8530473e26a77 210 Pfam PF09343 Conserved hypothetical protein 2217 (DUF2460) 4 209 1.2E-82 T 14-10-2018 IPR011740 Protein of unknown function DUF2460 PhaeoP54_01342 cd3c4df8bad8c518357aa35cda5027ec 315 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 232 310 6.8E-7 T 14-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 PhaeoP54_01342 cd3c4df8bad8c518357aa35cda5027ec 315 Gene3D G3DSA:3.40.47.10 175 310 1.8E-10 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 PhaeoP54_01342 cd3c4df8bad8c518357aa35cda5027ec 315 SUPERFAMILY SSF53901 192 310 1.04E-7 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 PhaeoP54_00439 41fcbdf1c78650a07983ed20faec98fc 138 SUPERFAMILY SSF46785 9 134 3.23E-26 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_00439 41fcbdf1c78650a07983ed20faec98fc 138 Gene3D G3DSA:1.10.10.10 7 90 6.9E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_00439 41fcbdf1c78650a07983ed20faec98fc 138 Pfam PF01475 Ferric uptake regulator family 16 131 5.2E-19 T 14-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 PhaeoP54_02602 8d0c80da1ca14aa5894114c6e68edc36 65 Pfam PF05532 CsbD-like 4 56 2.1E-17 T 14-10-2018 IPR008462 CsbD-like domain PhaeoP54_02602 8d0c80da1ca14aa5894114c6e68edc36 65 SUPERFAMILY SSF69047 1 63 1.57E-21 T 14-10-2018 IPR036629 YjbJ superfamily PhaeoP54_02602 8d0c80da1ca14aa5894114c6e68edc36 65 Gene3D G3DSA:1.10.1470.10 1 64 1.7E-27 T 14-10-2018 IPR036629 YjbJ superfamily PhaeoP54_02602 8d0c80da1ca14aa5894114c6e68edc36 65 PIRSF PIRSF039008 1 65 5.5E-30 T 14-10-2018 IPR026042 Stress response protein YjbJ PhaeoP54_02336 619b03f12b7d202fc027da9c32ff41a4 465 Pfam PF08811 Protein of unknown function (DUF1800) 11 464 4.3E-103 T 14-10-2018 IPR014917 Protein of unknown function DUF1800 PhaeoP54_02638 d20adf2622cf20f11b2dee0d79412846 294 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 108 287 3.4E-21 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PhaeoP54_02638 d20adf2622cf20f11b2dee0d79412846 294 SUPERFAMILY SSF161098 9 294 1.31E-51 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_02638 d20adf2622cf20f11b2dee0d79412846 294 Gene3D G3DSA:1.10.3720.10 7 285 1.4E-43 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_01226 deb19e5bb6afffc95391c33daef0f342 554 Pfam PF02872 5'-nucleotidase, C-terminal domain 371 521 4.1E-17 T 14-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 PhaeoP54_01226 deb19e5bb6afffc95391c33daef0f342 554 TIGRFAM TIGR04486 thiosulf_SoxB: thiosulfohydrolase SoxB 13 553 2.5E-248 T 14-10-2018 IPR030998 Thiosulfohydrolase SoxB PhaeoP54_01226 deb19e5bb6afffc95391c33daef0f342 554 SUPERFAMILY SSF56300 32 364 6.51E-78 T 14-10-2018 PhaeoP54_01226 deb19e5bb6afffc95391c33daef0f342 554 SUPERFAMILY SSF55816 367 550 1.96E-34 T 14-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 PhaeoP54_01226 deb19e5bb6afffc95391c33daef0f342 554 Gene3D G3DSA:3.90.780.10 370 554 1.5E-71 T 14-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 PhaeoP54_01226 deb19e5bb6afffc95391c33daef0f342 554 Pfam PF00149 Calcineurin-like phosphoesterase 40 296 8.4E-6 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 PhaeoP54_01226 deb19e5bb6afffc95391c33daef0f342 554 PRINTS PR01607 Apyrase family signature 307 327 1.4E-13 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 PhaeoP54_01226 deb19e5bb6afffc95391c33daef0f342 554 PRINTS PR01607 Apyrase family signature 36 54 1.4E-13 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 PhaeoP54_01226 deb19e5bb6afffc95391c33daef0f342 554 PRINTS PR01607 Apyrase family signature 260 277 1.4E-13 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 PhaeoP54_01226 deb19e5bb6afffc95391c33daef0f342 554 PRINTS PR01607 Apyrase family signature 279 302 1.4E-13 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 PhaeoP54_01226 deb19e5bb6afffc95391c33daef0f342 554 PRINTS PR01607 Apyrase family signature 503 522 1.4E-13 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 PhaeoP54_01226 deb19e5bb6afffc95391c33daef0f342 554 Gene3D G3DSA:3.60.21.10 92 369 3.6E-80 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like PhaeoP54_02776 9896ec1a68e7bacd74f1feb284f54b50 251 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 144 172 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 PhaeoP54_02776 9896ec1a68e7bacd74f1feb284f54b50 251 Gene3D G3DSA:3.40.50.720 1 250 5.9E-73 T 14-10-2018 PhaeoP54_02776 9896ec1a68e7bacd74f1feb284f54b50 251 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 246 1.6E-58 T 14-10-2018 PhaeoP54_02776 9896ec1a68e7bacd74f1feb284f54b50 251 SUPERFAMILY SSF51735 4 247 3.72E-71 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PhaeoP54_02776 9896ec1a68e7bacd74f1feb284f54b50 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 3.1E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_02776 9896ec1a68e7bacd74f1feb284f54b50 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 3.1E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_02776 9896ec1a68e7bacd74f1feb284f54b50 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 3.1E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_02776 9896ec1a68e7bacd74f1feb284f54b50 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 3.1E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_02776 9896ec1a68e7bacd74f1feb284f54b50 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 3.1E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_02776 9896ec1a68e7bacd74f1feb284f54b50 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 210 230 3.1E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_02776 9896ec1a68e7bacd74f1feb284f54b50 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 1.3E-6 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_02776 9896ec1a68e7bacd74f1feb284f54b50 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 1.3E-6 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_02776 9896ec1a68e7bacd74f1feb284f54b50 251 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 202 1.4E-4 T 14-10-2018 PhaeoP54_03630 24c0a51ba69ff27e7054c9e6efada900 455 Gene3D G3DSA:1.10.760.10 255 441 1.9E-38 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PhaeoP54_03630 24c0a51ba69ff27e7054c9e6efada900 455 SUPERFAMILY SSF46626 245 432 3.36E-30 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PhaeoP54_03630 24c0a51ba69ff27e7054c9e6efada900 455 SUPERFAMILY SSF46626 42 248 9.74E-30 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PhaeoP54_03630 24c0a51ba69ff27e7054c9e6efada900 455 Gene3D G3DSA:1.10.760.10 50 251 3.8E-21 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PhaeoP54_03630 24c0a51ba69ff27e7054c9e6efada900 455 Pfam PF00034 Cytochrome c 272 431 1.0E-4 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PhaeoP54_03630 24c0a51ba69ff27e7054c9e6efada900 455 Pfam PF03150 Di-haem cytochrome c peroxidase 55 261 2.8E-34 T 14-10-2018 IPR004852 Di-haem cytochrome c peroxidase GO:0016491|GO:0055114 PhaeoP54_00280 e55da5cbb13c5bd92392689d7612165e 516 Gene3D G3DSA:2.40.50.100 96 287 5.7E-34 T 14-10-2018 PhaeoP54_00280 e55da5cbb13c5bd92392689d7612165e 516 Pfam PF13437 HlyD family secretion protein 251 338 1.5E-5 T 14-10-2018 PhaeoP54_00280 e55da5cbb13c5bd92392689d7612165e 516 Gene3D G3DSA:1.10.287.470 132 251 5.7E-34 T 14-10-2018 PhaeoP54_00280 e55da5cbb13c5bd92392689d7612165e 516 SUPERFAMILY SSF111369 205 366 1.83E-10 T 14-10-2018 PhaeoP54_00280 e55da5cbb13c5bd92392689d7612165e 516 Pfam PF13533 Biotin-lipoyl like 104 145 2.9E-5 T 14-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain PhaeoP54_00280 e55da5cbb13c5bd92392689d7612165e 516 SUPERFAMILY SSF111369 88 188 5.49E-9 T 14-10-2018 PhaeoP54_00280 e55da5cbb13c5bd92392689d7612165e 516 Gene3D G3DSA:2.40.420.20 82 422 5.7E-34 T 14-10-2018 PhaeoP54_00280 e55da5cbb13c5bd92392689d7612165e 516 Gene3D G3DSA:2.40.30.170 85 368 5.7E-34 T 14-10-2018 PhaeoP54_00055 1648ec4be59c966bb5a2cd9bc0522bbf 429 TIGRFAM TIGR01514 NAPRTase: nicotinate phosphoribosyltransferase 17 416 2.1E-82 T 14-10-2018 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 PhaeoP54_00055 1648ec4be59c966bb5a2cd9bc0522bbf 429 Pfam PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family 187 421 5.0E-58 T 14-10-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 PhaeoP54_00055 1648ec4be59c966bb5a2cd9bc0522bbf 429 SUPERFAMILY SSF54675 2 154 1.46E-44 T 14-10-2018 PhaeoP54_00055 1648ec4be59c966bb5a2cd9bc0522bbf 429 SUPERFAMILY SSF51690 136 417 1.45E-80 T 14-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 PhaeoP54_00055 1648ec4be59c966bb5a2cd9bc0522bbf 429 Gene3D G3DSA:3.20.140.10 1 404 7.1E-142 T 14-10-2018 PhaeoP54_00055 1648ec4be59c966bb5a2cd9bc0522bbf 429 PIRSF PIRSF000484 7 425 6.1E-56 T 14-10-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 PhaeoP54_00055 1648ec4be59c966bb5a2cd9bc0522bbf 429 Hamap MF_00570 Nicotinate phosphoribosyltransferase [pncB]. 14 422 34.295 T 14-10-2018 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 PhaeoP54_02025 3c5365c502bb6870237feda1e975f54a 264 Gene3D G3DSA:3.40.50.12500 17 255 1.8E-67 T 14-10-2018 PhaeoP54_02025 3c5365c502bb6870237feda1e975f54a 264 SUPERFAMILY SSF51395 104 227 8.61E-5 T 14-10-2018 PhaeoP54_02025 3c5365c502bb6870237feda1e975f54a 264 Pfam PF01177 Asp/Glu/Hydantoin racemase 67 236 1.9E-8 T 14-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 PhaeoP54_02025 3c5365c502bb6870237feda1e975f54a 264 PIRSF PIRSF015736 11 258 8.6E-66 T 14-10-2018 IPR026286 Maleate isomerase/Arylmalonate decarboxylase PhaeoP54_02252 6c2c8b1d2a3f1ebc5ab3dd8e08060685 437 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 5 434 4.2E-157 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 PhaeoP54_02252 6c2c8b1d2a3f1ebc5ab3dd8e08060685 437 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 437 209.073 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 PhaeoP54_02252 6c2c8b1d2a3f1ebc5ab3dd8e08060685 437 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 10 17 - T 14-10-2018 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 PhaeoP54_02252 6c2c8b1d2a3f1ebc5ab3dd8e08060685 437 Gene3D G3DSA:3.40.440.10 5 260 1.1E-92 T 14-10-2018 PhaeoP54_02252 6c2c8b1d2a3f1ebc5ab3dd8e08060685 437 Gene3D G3DSA:3.90.170.10 267 437 1.9E-66 T 14-10-2018 PhaeoP54_02252 6c2c8b1d2a3f1ebc5ab3dd8e08060685 437 SUPERFAMILY SSF52540 1 431 6.59E-166 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_02252 6c2c8b1d2a3f1ebc5ab3dd8e08060685 437 Pfam PF00709 Adenylosuccinate synthetase 4 429 3.0E-170 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 PhaeoP54_02252 6c2c8b1d2a3f1ebc5ab3dd8e08060685 437 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 134 145 - T 14-10-2018 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 PhaeoP54_02252 6c2c8b1d2a3f1ebc5ab3dd8e08060685 437 SMART SM00788 3 430 1.2E-281 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 PhaeoP54_02252 6c2c8b1d2a3f1ebc5ab3dd8e08060685 437 Gene3D G3DSA:1.10.300.10 102 201 1.1E-92 T 14-10-2018 PhaeoP54_02912 31385f04aac789805e19bdffa9cb5e89 640 Gene3D G3DSA:3.10.105.10 343 603 3.2E-212 T 14-10-2018 PhaeoP54_02912 31385f04aac789805e19bdffa9cb5e89 640 Gene3D G3DSA:3.40.190.10 54 624 3.2E-212 T 14-10-2018 PhaeoP54_02912 31385f04aac789805e19bdffa9cb5e89 640 SUPERFAMILY SSF53850 75 624 8.14E-112 T 14-10-2018 PhaeoP54_02912 31385f04aac789805e19bdffa9cb5e89 640 PIRSF PIRSF002741 23 629 3.3E-81 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 PhaeoP54_02912 31385f04aac789805e19bdffa9cb5e89 640 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 124 538 1.2E-64 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain PhaeoP54_03251 2e380462efc64013714608f461999e82 123 Gene3D G3DSA:2.170.150.70 2 112 1.3E-13 T 14-10-2018 PhaeoP54_03251 2e380462efc64013714608f461999e82 123 SUPERFAMILY SSF51316 1 121 1.36E-33 T 14-10-2018 IPR011057 Mss4-like superfamily PhaeoP54_03251 2e380462efc64013714608f461999e82 123 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 24 107 8.4E-14 T 14-10-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 PhaeoP54_01359 eddd0a4e5e4bd8bb5bb6364b0059a130 330 Pfam PF00296 Luciferase-like monooxygenase 4 302 1.5E-34 T 14-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 PhaeoP54_01359 eddd0a4e5e4bd8bb5bb6364b0059a130 330 SUPERFAMILY SSF51679 8 317 1.31E-45 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 PhaeoP54_01359 eddd0a4e5e4bd8bb5bb6364b0059a130 330 Gene3D G3DSA:3.20.20.30 6 322 1.4E-57 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 PhaeoP54_03525 da9158fb79f3013b76530b4a7883479e 270 Gene3D G3DSA:1.20.1330.10 43 227 6.5E-18 T 14-10-2018 PhaeoP54_03525 da9158fb79f3013b76530b4a7883479e 270 SUPERFAMILY SSF64518 1 270 4.18E-55 T 14-10-2018 PhaeoP54_03525 da9158fb79f3013b76530b4a7883479e 270 PRINTS PR00207 Flagellin signature 107 130 2.7E-7 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 PhaeoP54_03525 da9158fb79f3013b76530b4a7883479e 270 PRINTS PR00207 Flagellin signature 36 53 2.7E-7 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 PhaeoP54_03525 da9158fb79f3013b76530b4a7883479e 270 PRINTS PR00207 Flagellin signature 75 94 2.7E-7 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 PhaeoP54_03525 da9158fb79f3013b76530b4a7883479e 270 Pfam PF00669 Bacterial flagellin N-terminal helical region 4 138 1.3E-23 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 PhaeoP54_03525 da9158fb79f3013b76530b4a7883479e 270 Pfam PF00700 Bacterial flagellin C-terminal helical region 189 269 5.1E-11 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 PhaeoP54_02859 04163aaee09a167e775a920c0e675ab1 491 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 263 270 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 PhaeoP54_02859 04163aaee09a167e775a920c0e675ab1 491 Gene3D G3DSA:3.40.309.10 267 456 2.3E-176 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 PhaeoP54_02859 04163aaee09a167e775a920c0e675ab1 491 Gene3D G3DSA:3.40.605.10 35 481 2.3E-176 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 PhaeoP54_02859 04163aaee09a167e775a920c0e675ab1 491 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 291 302 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 PhaeoP54_02859 04163aaee09a167e775a920c0e675ab1 491 TIGRFAM TIGR01780 SSADH: succinate-semialdehyde dehydrogenase 38 485 1.6E-211 T 14-10-2018 IPR010102 Succinate semialdehyde dehydrogenase GO:0009013|GO:0009450|GO:0055114 Reactome: R-HSA-916853 PhaeoP54_02859 04163aaee09a167e775a920c0e675ab1 491 SUPERFAMILY SSF53720 13 490 5.63E-165 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 PhaeoP54_02859 04163aaee09a167e775a920c0e675ab1 491 Pfam PF00171 Aldehyde dehydrogenase family 28 486 3.3E-166 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 PhaeoP54_00061 d3d8d827431beba95ce35a2c387b7473 394 Pfam PF00850 Histone deacetylase domain 44 328 9.3E-61 T 14-10-2018 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 PhaeoP54_00061 d3d8d827431beba95ce35a2c387b7473 394 PRINTS PR01270 Histone deacetylase superfamily signature 183 198 1.9E-18 T 14-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 PhaeoP54_00061 d3d8d827431beba95ce35a2c387b7473 394 PRINTS PR01270 Histone deacetylase superfamily signature 263 273 1.9E-18 T 14-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 PhaeoP54_00061 d3d8d827431beba95ce35a2c387b7473 394 PRINTS PR01270 Histone deacetylase superfamily signature 150 173 1.9E-18 T 14-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 PhaeoP54_00061 d3d8d827431beba95ce35a2c387b7473 394 Gene3D G3DSA:3.40.800.20 26 390 1.4E-98 T 14-10-2018 IPR037138 Histone deacetylase domain superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 PhaeoP54_00061 d3d8d827431beba95ce35a2c387b7473 394 SUPERFAMILY SSF52768 28 373 3.64E-88 T 14-10-2018 IPR023696 Ureohydrolase domain superfamily PhaeoP54_01605 c92e590a07b2b78add7e90882b7415a0 160 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 10 61 1.9E-6 T 14-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 PhaeoP54_01605 c92e590a07b2b78add7e90882b7415a0 160 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 43 51 - T 14-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 PhaeoP54_01605 c92e590a07b2b78add7e90882b7415a0 160 SUPERFAMILY SSF47741 88 157 9.94E-31 T 14-10-2018 IPR036884 [2Fe-2S]-binding domain superfamily PhaeoP54_01605 c92e590a07b2b78add7e90882b7415a0 160 Gene3D G3DSA:1.10.150.120 79 160 1.7E-31 T 14-10-2018 PhaeoP54_01605 c92e590a07b2b78add7e90882b7415a0 160 Pfam PF01799 [2Fe-2S] binding domain 77 149 7.9E-28 T 14-10-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 PhaeoP54_01605 c92e590a07b2b78add7e90882b7415a0 160 Gene3D G3DSA:3.10.20.30 2 78 3.7E-28 T 14-10-2018 IPR012675 Beta-grasp domain superfamily PhaeoP54_01605 c92e590a07b2b78add7e90882b7415a0 160 SUPERFAMILY SSF54292 5 92 6.95E-24 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 PhaeoP54_00523 ef32b42b38291fd6cc6cd52c0450c7d6 276 TIGRFAM TIGR03214 ura-cupin: putative allantoin catabolism protein 6 271 3.8E-117 T 14-10-2018 IPR017627 Conserved hypothetical protein CHP03214, putative allantoin-urate catabolism protein KEGG: 00230+3.5.3.26|MetaCyc: PWY-5692|MetaCyc: PWY-5698 PhaeoP54_00523 ef32b42b38291fd6cc6cd52c0450c7d6 276 SUPERFAMILY SSF51182 19 272 3.19E-83 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily PhaeoP54_00523 ef32b42b38291fd6cc6cd52c0450c7d6 276 Pfam PF07883 Cupin domain 195 255 8.2E-8 T 14-10-2018 IPR013096 Cupin 2, conserved barrel PhaeoP54_00523 ef32b42b38291fd6cc6cd52c0450c7d6 276 Pfam PF07883 Cupin domain 72 141 7.9E-11 T 14-10-2018 IPR013096 Cupin 2, conserved barrel PhaeoP54_00523 ef32b42b38291fd6cc6cd52c0450c7d6 276 Gene3D G3DSA:2.60.120.10 40 165 1.1E-108 T 14-10-2018 IPR014710 RmlC-like jelly roll fold PhaeoP54_00523 ef32b42b38291fd6cc6cd52c0450c7d6 276 Gene3D G3DSA:2.60.120.10 27 268 1.1E-108 T 14-10-2018 IPR014710 RmlC-like jelly roll fold PhaeoP54_00313 a65c684b7ac5790d8bd78cc92ae63a3b 391 ProSitePatterns PS00099 Thiolases active site. 372 385 - T 14-10-2018 IPR020610 Thiolase, active site GO:0016747 PhaeoP54_00313 a65c684b7ac5790d8bd78cc92ae63a3b 391 SUPERFAMILY SSF53901 269 390 1.73E-44 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 PhaeoP54_00313 a65c684b7ac5790d8bd78cc92ae63a3b 391 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 84 102 - T 14-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 PhaeoP54_00313 a65c684b7ac5790d8bd78cc92ae63a3b 391 Gene3D G3DSA:3.40.47.10 126 388 2.1E-149 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 PhaeoP54_00313 a65c684b7ac5790d8bd78cc92ae63a3b 391 PIRSF PIRSF000429 1 391 7.8E-123 T 14-10-2018 IPR002155 Thiolase GO:0016747 PhaeoP54_00313 a65c684b7ac5790d8bd78cc92ae63a3b 391 Pfam PF02803 Thiolase, C-terminal domain 269 390 3.3E-52 T 14-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 PhaeoP54_00313 a65c684b7ac5790d8bd78cc92ae63a3b 391 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 389 1.3E-137 T 14-10-2018 IPR002155 Thiolase GO:0016747 PhaeoP54_00313 a65c684b7ac5790d8bd78cc92ae63a3b 391 ProSitePatterns PS00737 Thiolases signature 2. 337 353 - T 14-10-2018 IPR020613 Thiolase, conserved site GO:0016747 PhaeoP54_00313 a65c684b7ac5790d8bd78cc92ae63a3b 391 Pfam PF00108 Thiolase, N-terminal domain 4 260 5.6E-100 T 14-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 PhaeoP54_00313 a65c684b7ac5790d8bd78cc92ae63a3b 391 Gene3D G3DSA:3.40.47.10 6 274 2.1E-149 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 PhaeoP54_00313 a65c684b7ac5790d8bd78cc92ae63a3b 391 SUPERFAMILY SSF53901 3 267 2.16E-80 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 PhaeoP54_03920 1f775b02d0063b96c094a30300c0aa0e 434 Pfam PF00501 AMP-binding enzyme 92 329 1.7E-20 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 PhaeoP54_03920 1f775b02d0063b96c094a30300c0aa0e 434 Gene3D G3DSA:3.30.300.30 326 429 3.6E-21 T 14-10-2018 PhaeoP54_03920 1f775b02d0063b96c094a30300c0aa0e 434 Gene3D G3DSA:3.40.50.12780 21 325 6.9E-31 T 14-10-2018 PhaeoP54_03920 1f775b02d0063b96c094a30300c0aa0e 434 SUPERFAMILY SSF56801 52 426 3.79E-61 T 14-10-2018 PhaeoP54_03920 1f775b02d0063b96c094a30300c0aa0e 434 Pfam PF13193 AMP-binding enzyme C-terminal domain 339 410 3.4E-6 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain PhaeoP54_03920 1f775b02d0063b96c094a30300c0aa0e 434 ProSitePatterns PS00455 Putative AMP-binding domain signature. 106 117 - T 14-10-2018 IPR020845 AMP-binding, conserved site PhaeoP54_03750 cdc762c49195a90d5135bc767f69ac72 301 SUPERFAMILY SSF46785 8 88 4.91E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_03750 cdc762c49195a90d5135bc767f69ac72 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 13 70 6.9E-19 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PhaeoP54_03750 cdc762c49195a90d5135bc767f69ac72 301 Pfam PF03466 LysR substrate binding domain 96 295 3.8E-33 T 14-10-2018 IPR005119 LysR, substrate-binding PhaeoP54_03750 cdc762c49195a90d5135bc767f69ac72 301 Gene3D G3DSA:3.40.190.10 106 292 4.5E-34 T 14-10-2018 PhaeoP54_03750 cdc762c49195a90d5135bc767f69ac72 301 Gene3D G3DSA:3.40.190.10 165 265 4.5E-34 T 14-10-2018 PhaeoP54_03750 cdc762c49195a90d5135bc767f69ac72 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 37 47 5.0E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PhaeoP54_03750 cdc762c49195a90d5135bc767f69ac72 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 26 37 5.0E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PhaeoP54_03750 cdc762c49195a90d5135bc767f69ac72 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 47 58 5.0E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PhaeoP54_03750 cdc762c49195a90d5135bc767f69ac72 301 Gene3D G3DSA:1.10.10.10 10 97 5.4E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_03750 cdc762c49195a90d5135bc767f69ac72 301 SUPERFAMILY SSF53850 96 299 6.7E-36 T 14-10-2018 PhaeoP54_02231 7a3aeb1e7cbb009084a8ab9619c1b00a 421 SMART SM01210 326 420 1.8E-52 T 14-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 PhaeoP54_02231 7a3aeb1e7cbb009084a8ab9619c1b00a 421 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 101 292 8.7E-76 T 14-10-2018 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 PhaeoP54_02231 7a3aeb1e7cbb009084a8ab9619c1b00a 421 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 286 293 - T 14-10-2018 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 PhaeoP54_02231 7a3aeb1e7cbb009084a8ab9619c1b00a 421 Gene3D G3DSA:3.90.600.10 326 421 3.6E-35 T 14-10-2018 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 PhaeoP54_02231 7a3aeb1e7cbb009084a8ab9619c1b00a 421 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 100 2.7E-33 T 14-10-2018 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 PhaeoP54_02231 7a3aeb1e7cbb009084a8ab9619c1b00a 421 SUPERFAMILY SSF51246 325 420 2.41E-30 T 14-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 PhaeoP54_02231 7a3aeb1e7cbb009084a8ab9619c1b00a 421 SUPERFAMILY SSF52440 1 100 9.5E-34 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily PhaeoP54_02231 7a3aeb1e7cbb009084a8ab9619c1b00a 421 SUPERFAMILY SSF56059 102 322 1.2E-61 T 14-10-2018 PhaeoP54_02231 7a3aeb1e7cbb009084a8ab9619c1b00a 421 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 420 41.157 T 14-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 PhaeoP54_02231 7a3aeb1e7cbb009084a8ab9619c1b00a 421 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 327 418 6.7E-29 T 14-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 PhaeoP54_02231 7a3aeb1e7cbb009084a8ab9619c1b00a 421 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 420 7.4E-161 T 14-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 PhaeoP54_02231 7a3aeb1e7cbb009084a8ab9619c1b00a 421 SMART SM01209 101 292 2.9E-124 T 14-10-2018 PhaeoP54_02231 7a3aeb1e7cbb009084a8ab9619c1b00a 421 Gene3D G3DSA:3.30.1490.20 119 187 4.0E-25 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 PhaeoP54_02231 7a3aeb1e7cbb009084a8ab9619c1b00a 421 Gene3D G3DSA:3.30.470.20 188 325 5.1E-54 T 14-10-2018 PhaeoP54_02231 7a3aeb1e7cbb009084a8ab9619c1b00a 421 Gene3D G3DSA:3.40.50.20 2 93 2.7E-34 T 14-10-2018 PhaeoP54_01476 a3b4953fffbe9acf25bd5a2997e0328a 332 SMART SM01004 8 330 3.3E-222 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 PhaeoP54_01476 a3b4953fffbe9acf25bd5a2997e0328a 332 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 249 261 - T 14-10-2018 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 PhaeoP54_01476 a3b4953fffbe9acf25bd5a2997e0328a 332 PIRSF PIRSF001415 1 332 1.8E-141 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 PhaeoP54_01476 a3b4953fffbe9acf25bd5a2997e0328a 332 SUPERFAMILY SSF51569 4 331 1.9E-137 T 14-10-2018 PhaeoP54_01476 a3b4953fffbe9acf25bd5a2997e0328a 332 Pfam PF00490 Delta-aminolevulinic acid dehydratase 11 328 2.8E-136 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 PhaeoP54_01476 a3b4953fffbe9acf25bd5a2997e0328a 332 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 196 215 2.1E-53 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 PhaeoP54_01476 a3b4953fffbe9acf25bd5a2997e0328a 332 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 304 323 2.1E-53 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 PhaeoP54_01476 a3b4953fffbe9acf25bd5a2997e0328a 332 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 274 289 2.1E-53 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 PhaeoP54_01476 a3b4953fffbe9acf25bd5a2997e0328a 332 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 128 142 2.1E-53 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 PhaeoP54_01476 a3b4953fffbe9acf25bd5a2997e0328a 332 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 158 177 2.1E-53 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 PhaeoP54_01476 a3b4953fffbe9acf25bd5a2997e0328a 332 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 249 265 2.1E-53 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 PhaeoP54_01476 a3b4953fffbe9acf25bd5a2997e0328a 332 Gene3D G3DSA:3.20.20.70 1 332 2.9E-136 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PhaeoP54_03048 ef9d0712c4abe4c74d4fa2bd634b3e1f 212 Pfam PF00857 Isochorismatase family 16 165 3.8E-22 T 14-10-2018 IPR000868 Isochorismatase-like GO:0003824 PhaeoP54_03048 ef9d0712c4abe4c74d4fa2bd634b3e1f 212 SUPERFAMILY SSF52499 6 198 3.14E-43 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 PhaeoP54_03048 ef9d0712c4abe4c74d4fa2bd634b3e1f 212 Gene3D G3DSA:3.40.50.850 3 206 1.5E-47 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 PhaeoP54_00518 afd6d0fecf8781cb54596f6e3d093c93 471 Gene3D G3DSA:3.20.20.370 1 307 6.2E-94 T 14-10-2018 PhaeoP54_00518 afd6d0fecf8781cb54596f6e3d093c93 471 SUPERFAMILY SSF88713 4 301 2.72E-88 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 PhaeoP54_00518 afd6d0fecf8781cb54596f6e3d093c93 471 TIGRFAM TIGR03212 uraD_N-term-dom: putative urate catabolism protein 4 301 4.5E-161 T 14-10-2018 IPR017625 PuuE allantoinase/chitin deacetylase 1 PhaeoP54_00518 afd6d0fecf8781cb54596f6e3d093c93 471 Pfam PF09349 OHCU decarboxylase 309 467 4.2E-41 T 14-10-2018 IPR018020 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 PhaeoP54_00518 afd6d0fecf8781cb54596f6e3d093c93 471 Gene3D G3DSA:1.10.3330.10 309 471 6.4E-60 T 14-10-2018 IPR036778 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase superfamily KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 PhaeoP54_00518 afd6d0fecf8781cb54596f6e3d093c93 471 SUPERFAMILY SSF158694 309 470 2.49E-53 T 14-10-2018 IPR036778 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase superfamily KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 PhaeoP54_00518 afd6d0fecf8781cb54596f6e3d093c93 471 TIGRFAM TIGR03164 UHCUDC: OHCU decarboxylase 310 469 1.5E-64 T 14-10-2018 IPR017580 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase, type 1 GO:0019428 KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 PhaeoP54_00518 afd6d0fecf8781cb54596f6e3d093c93 471 Pfam PF01522 Polysaccharide deacetylase 74 183 4.3E-11 T 14-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 PhaeoP54_02414 3876ad264184da80f4ebc6a2a0936755 121 SUPERFAMILY SSF46626 21 121 9.59E-34 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PhaeoP54_02414 3876ad264184da80f4ebc6a2a0936755 121 Pfam PF00034 Cytochrome c 24 120 1.4E-11 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PhaeoP54_02414 3876ad264184da80f4ebc6a2a0936755 121 Gene3D G3DSA:1.10.760.10 12 119 2.0E-43 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PhaeoP54_02414 3876ad264184da80f4ebc6a2a0936755 121 PRINTS PR00604 Class IA and IB cytochrome C signature 33 40 6.1E-22 T 14-10-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PhaeoP54_02414 3876ad264184da80f4ebc6a2a0936755 121 PRINTS PR00604 Class IA and IB cytochrome C signature 111 119 6.1E-22 T 14-10-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PhaeoP54_02414 3876ad264184da80f4ebc6a2a0936755 121 PRINTS PR00604 Class IA and IB cytochrome C signature 45 60 6.1E-22 T 14-10-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PhaeoP54_02414 3876ad264184da80f4ebc6a2a0936755 121 PRINTS PR00604 Class IA and IB cytochrome C signature 75 91 6.1E-22 T 14-10-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PhaeoP54_02414 3876ad264184da80f4ebc6a2a0936755 121 PRINTS PR00604 Class IA and IB cytochrome C signature 94 104 6.1E-22 T 14-10-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PhaeoP54_02414 3876ad264184da80f4ebc6a2a0936755 121 PRINTS PR00604 Class IA and IB cytochrome C signature 61 71 6.1E-22 T 14-10-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PhaeoP54_00213 bd4f05d86a780c761ac484aa55ba8afc 389 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 251 272 5.4E-40 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 PhaeoP54_00213 bd4f05d86a780c761ac484aa55ba8afc 389 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 65 85 5.4E-40 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 PhaeoP54_00213 bd4f05d86a780c761ac484aa55ba8afc 389 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 369 389 5.4E-40 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 PhaeoP54_00213 bd4f05d86a780c761ac484aa55ba8afc 389 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 23 46 5.4E-40 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 PhaeoP54_00213 bd4f05d86a780c761ac484aa55ba8afc 389 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 354 369 5.4E-40 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 PhaeoP54_00213 bd4f05d86a780c761ac484aa55ba8afc 389 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 308 331 5.4E-40 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 PhaeoP54_00213 bd4f05d86a780c761ac484aa55ba8afc 389 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 284 308 5.4E-40 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 PhaeoP54_00213 bd4f05d86a780c761ac484aa55ba8afc 389 Pfam PF13437 HlyD family secretion protein 238 357 1.7E-18 T 14-10-2018 PhaeoP54_00213 bd4f05d86a780c761ac484aa55ba8afc 389 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 183 388 2.8E-64 T 14-10-2018 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 PhaeoP54_00213 bd4f05d86a780c761ac484aa55ba8afc 389 ProSitePatterns PS00543 HlyD family secretion proteins signature. 354 376 - T 14-10-2018 IPR006144 Secretion protein HlyD, conserved site GO:0008565|GO:0009306|GO:0016020 PhaeoP54_00213 bd4f05d86a780c761ac484aa55ba8afc 389 Pfam PF13533 Biotin-lipoyl like 62 96 1.8E-7 T 14-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain PhaeoP54_03644 b72440aa184581c18048eee9265274ac 459 Pfam PF00171 Aldehyde dehydrogenase family 3 455 1.3E-127 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 PhaeoP54_03644 b72440aa184581c18048eee9265274ac 459 Gene3D G3DSA:3.40.605.10 3 453 3.5E-138 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 PhaeoP54_03644 b72440aa184581c18048eee9265274ac 459 SUPERFAMILY SSF53720 3 457 6.94E-134 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 PhaeoP54_03644 b72440aa184581c18048eee9265274ac 459 Gene3D G3DSA:3.40.309.10 238 429 3.5E-138 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 PhaeoP54_01042 c86991487fccfe9ac9f62f367be99027 72 Pfam PF02416 mttA/Hcf106 family 5 55 3.8E-11 T 14-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 PhaeoP54_01042 c86991487fccfe9ac9f62f367be99027 72 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 2 66 16.78 T 14-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 PhaeoP54_01042 c86991487fccfe9ac9f62f367be99027 72 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 5 50 1.7E-15 T 14-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 PhaeoP54_03109 537af675ec9a2cb07eb787be5b470db6 172 Pfam PF01327 Polypeptide deformylase 3 155 1.1E-50 T 14-10-2018 IPR023635 Peptide deformylase PhaeoP54_03109 537af675ec9a2cb07eb787be5b470db6 172 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 5 163 2.5E-51 T 14-10-2018 IPR023635 Peptide deformylase PhaeoP54_03109 537af675ec9a2cb07eb787be5b470db6 172 SUPERFAMILY SSF56420 1 167 4.19E-63 T 14-10-2018 IPR036821 Peptide deformylase superfamily PhaeoP54_03109 537af675ec9a2cb07eb787be5b470db6 172 Hamap MF_00163 Peptide deformylase [def]. 1 165 30.3 T 14-10-2018 IPR023635 Peptide deformylase PhaeoP54_03109 537af675ec9a2cb07eb787be5b470db6 172 Gene3D G3DSA:3.90.45.10 1 171 2.8E-60 T 14-10-2018 IPR036821 Peptide deformylase superfamily PhaeoP54_03109 537af675ec9a2cb07eb787be5b470db6 172 PRINTS PR01576 Peptide deformylase signature 32 61 6.8E-35 T 14-10-2018 IPR023635 Peptide deformylase PhaeoP54_03109 537af675ec9a2cb07eb787be5b470db6 172 PRINTS PR01576 Peptide deformylase signature 104 122 6.8E-35 T 14-10-2018 IPR023635 Peptide deformylase PhaeoP54_03109 537af675ec9a2cb07eb787be5b470db6 172 PRINTS PR01576 Peptide deformylase signature 92 103 6.8E-35 T 14-10-2018 IPR023635 Peptide deformylase PhaeoP54_03109 537af675ec9a2cb07eb787be5b470db6 172 PRINTS PR01576 Peptide deformylase signature 123 152 6.8E-35 T 14-10-2018 IPR023635 Peptide deformylase PhaeoP54_03109 537af675ec9a2cb07eb787be5b470db6 172 PIRSF PIRSF004749 1 171 3.4E-55 T 14-10-2018 IPR023635 Peptide deformylase PhaeoP54_00900 269cdfcf1af18cc1b867b480487025f6 212 Gene3D G3DSA:3.40.50.880 3 211 1.3E-65 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like PhaeoP54_00900 269cdfcf1af18cc1b867b480487025f6 212 Pfam PF00117 Glutamine amidotransferase class-I 6 198 2.3E-17 T 14-10-2018 IPR017926 Glutamine amidotransferase PhaeoP54_00900 269cdfcf1af18cc1b867b480487025f6 212 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 2 210 32.36 T 14-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 PhaeoP54_00900 269cdfcf1af18cc1b867b480487025f6 212 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 4 209 2.7E-61 T 14-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 PhaeoP54_00900 269cdfcf1af18cc1b867b480487025f6 212 PIRSF PIRSF000495 1 212 3.2E-65 T 14-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 PhaeoP54_00900 269cdfcf1af18cc1b867b480487025f6 212 SUPERFAMILY SSF52317 4 202 3.55E-51 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like PhaeoP54_02714 c7bc78dc138edf8faac940fdfc2fad2e 480 SUPERFAMILY SSF47741 90 164 4.58E-29 T 14-10-2018 IPR036884 [2Fe-2S]-binding domain superfamily PhaeoP54_02714 c7bc78dc138edf8faac940fdfc2fad2e 480 Pfam PF03450 CO dehydrogenase flavoprotein C-terminal domain 368 466 1.3E-30 T 14-10-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal PhaeoP54_02714 c7bc78dc138edf8faac940fdfc2fad2e 480 Gene3D G3DSA:3.10.20.30 1 81 1.6E-29 T 14-10-2018 IPR012675 Beta-grasp domain superfamily PhaeoP54_02714 c7bc78dc138edf8faac940fdfc2fad2e 480 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 6 57 1.6E-7 T 14-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 PhaeoP54_02714 c7bc78dc138edf8faac940fdfc2fad2e 480 Gene3D G3DSA:3.30.390.50 367 468 3.3E-28 T 14-10-2018 PhaeoP54_02714 c7bc78dc138edf8faac940fdfc2fad2e 480 TIGRFAM TIGR02963 xanthine_xdhA: xanthine dehydrogenase, small subunit 3 465 5.7E-182 T 14-10-2018 IPR014307 Xanthine dehydrogenase, small subunit GO:0004854|GO:0004855|GO:0050660|GO:0055114 KEGG: 00230+1.17.1.4|MetaCyc: PWY-5497|MetaCyc: PWY-5695|MetaCyc: PWY-6538|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-6999|Reactome: R-HSA-74259|Reactome: R-HSA-8851680 PhaeoP54_02714 c7bc78dc138edf8faac940fdfc2fad2e 480 Pfam PF00941 FAD binding domain in molybdopterin dehydrogenase 194 357 1.4E-49 T 14-10-2018 IPR002346 Molybdopterin dehydrogenase, FAD-binding GO:0016491|GO:0055114 PhaeoP54_02714 c7bc78dc138edf8faac940fdfc2fad2e 480 SUPERFAMILY SSF56176 190 357 4.67E-50 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 PhaeoP54_02714 c7bc78dc138edf8faac940fdfc2fad2e 480 SUPERFAMILY SSF55447 366 469 3.66E-33 T 14-10-2018 IPR036683 CO dehydrogenase flavoprotein, C-terminal domain superfamily PhaeoP54_02714 c7bc78dc138edf8faac940fdfc2fad2e 480 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 40 48 - T 14-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 PhaeoP54_02714 c7bc78dc138edf8faac940fdfc2fad2e 480 Gene3D G3DSA:3.30.465.10 244 357 1.2E-36 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 PhaeoP54_02714 c7bc78dc138edf8faac940fdfc2fad2e 480 Gene3D G3DSA:3.30.43.10 194 243 3.4E-23 T 14-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 PhaeoP54_02714 c7bc78dc138edf8faac940fdfc2fad2e 480 Gene3D G3DSA:1.10.150.120 82 167 1.0E-33 T 14-10-2018 PhaeoP54_02714 c7bc78dc138edf8faac940fdfc2fad2e 480 SMART SM01092 367 468 2.3E-34 T 14-10-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal PhaeoP54_02714 c7bc78dc138edf8faac940fdfc2fad2e 480 PIRSF PIRSF036557 1 479 5.8E-190 T 14-10-2018 IPR012175 Xanthine dehydrogenase, small subunit, bacteria PhaeoP54_02714 c7bc78dc138edf8faac940fdfc2fad2e 480 Pfam PF01799 [2Fe-2S] binding domain 78 147 1.5E-27 T 14-10-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 PhaeoP54_02714 c7bc78dc138edf8faac940fdfc2fad2e 480 SUPERFAMILY SSF54292 1 81 5.11E-21 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 PhaeoP54_03620 a00a8f89a7394a0ea4b11ebdd857c0b5 528 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 76 98 - T 14-10-2018 IPR023765 Solute-binding protein family 5, conserved site PhaeoP54_03620 a00a8f89a7394a0ea4b11ebdd857c0b5 528 SUPERFAMILY SSF53850 24 526 1.99E-117 T 14-10-2018 PhaeoP54_03620 a00a8f89a7394a0ea4b11ebdd857c0b5 528 Gene3D G3DSA:3.10.105.10 294 497 7.6E-47 T 14-10-2018 PhaeoP54_03620 a00a8f89a7394a0ea4b11ebdd857c0b5 528 Gene3D G3DSA:3.40.190.10 7 286 5.1E-63 T 14-10-2018 PhaeoP54_03620 a00a8f89a7394a0ea4b11ebdd857c0b5 528 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 71 441 8.0E-87 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain PhaeoP54_03620 a00a8f89a7394a0ea4b11ebdd857c0b5 528 PIRSF PIRSF002741 2 527 2.0E-91 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 PhaeoP54_02750 1f2a5b32b01b5d223a9404641adb0f3e 366 Gene3D G3DSA:3.90.230.10 140 365 7.3E-70 T 14-10-2018 PhaeoP54_02750 1f2a5b32b01b5d223a9404641adb0f3e 366 SUPERFAMILY SSF55920 142 363 1.27E-66 T 14-10-2018 IPR036005 Creatinase/aminopeptidase-like PhaeoP54_02750 1f2a5b32b01b5d223a9404641adb0f3e 366 Gene3D G3DSA:3.40.350.10 1 134 7.0E-20 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal PhaeoP54_02750 1f2a5b32b01b5d223a9404641adb0f3e 366 Pfam PF00557 Metallopeptidase family M24 150 350 6.7E-55 T 14-10-2018 IPR000994 Peptidase M24 PhaeoP54_02750 1f2a5b32b01b5d223a9404641adb0f3e 366 Pfam PF01321 Creatinase/Prolidase N-terminal domain 9 132 5.4E-10 T 14-10-2018 IPR000587 Creatinase, N-terminal GO:0016787 PhaeoP54_02750 1f2a5b32b01b5d223a9404641adb0f3e 366 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 296 308 - T 14-10-2018 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site PhaeoP54_02750 1f2a5b32b01b5d223a9404641adb0f3e 366 SUPERFAMILY SSF53092 4 124 2.09E-12 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal PhaeoP54_01054 bcce51c4b760bb1bd9d7f6f0cc69bb94 490 Gene3D G3DSA:3.60.20.10 21 473 2.5E-151 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal PhaeoP54_01054 bcce51c4b760bb1bd9d7f6f0cc69bb94 490 SUPERFAMILY SSF53271 259 477 4.83E-69 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like PhaeoP54_01054 bcce51c4b760bb1bd9d7f6f0cc69bb94 490 Pfam PF13537 Glutamine amidotransferase domain 107 222 6.6E-22 T 14-10-2018 IPR017932 Glutamine amidotransferase type 2 domain PhaeoP54_01054 bcce51c4b760bb1bd9d7f6f0cc69bb94 490 SUPERFAMILY SSF56235 21 261 5.58E-64 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal PhaeoP54_01054 bcce51c4b760bb1bd9d7f6f0cc69bb94 490 PIRSF PIRSF000485 17 486 8.9E-164 T 14-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 PhaeoP54_01054 bcce51c4b760bb1bd9d7f6f0cc69bb94 490 Gene3D G3DSA:3.40.50.2020 284 448 2.5E-151 T 14-10-2018 PhaeoP54_01054 bcce51c4b760bb1bd9d7f6f0cc69bb94 490 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 21 472 2.3E-149 T 14-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 PhaeoP54_01054 bcce51c4b760bb1bd9d7f6f0cc69bb94 490 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 20 471 45.373 T 14-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 PhaeoP54_03184 4203c9c5a4e75a16cc72efd910f1e3eb 168 Pfam PF00293 NUDIX domain 44 135 5.0E-14 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 PhaeoP54_03184 4203c9c5a4e75a16cc72efd910f1e3eb 168 Gene3D G3DSA:3.90.79.10 35 166 2.3E-22 T 14-10-2018 PhaeoP54_03184 4203c9c5a4e75a16cc72efd910f1e3eb 168 ProSitePatterns PS00893 Nudix box signature. 68 89 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 PhaeoP54_03184 4203c9c5a4e75a16cc72efd910f1e3eb 168 PRINTS PR00502 NUDIX hydrolase family signature 77 92 2.1E-5 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 PhaeoP54_03184 4203c9c5a4e75a16cc72efd910f1e3eb 168 PRINTS PR00502 NUDIX hydrolase family signature 63 77 2.1E-5 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 PhaeoP54_03184 4203c9c5a4e75a16cc72efd910f1e3eb 168 SUPERFAMILY SSF55811 19 163 8.8E-26 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 PhaeoP54_02700 b5433f9b64ad24ffa581c7e8e8bcc3c1 546 SUPERFAMILY SSF53697 2 541 2.67E-197 T 14-10-2018 PhaeoP54_02700 b5433f9b64ad24ffa581c7e8e8bcc3c1 546 Gene3D G3DSA:3.40.50.10490 9 500 2.8E-210 T 14-10-2018 PhaeoP54_02700 b5433f9b64ad24ffa581c7e8e8bcc3c1 546 Gene3D G3DSA:1.10.1390.10 501 544 9.6E-13 T 14-10-2018 IPR023096 Phosphoglucose isomerase, C-terminal GO:0004347|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 PhaeoP54_02700 b5433f9b64ad24ffa581c7e8e8bcc3c1 546 Pfam PF00342 Phosphoglucose isomerase 47 538 5.4E-197 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 PhaeoP54_02700 b5433f9b64ad24ffa581c7e8e8bcc3c1 546 Gene3D G3DSA:3.40.50.10490 93 284 2.8E-210 T 14-10-2018 PhaeoP54_02700 b5433f9b64ad24ffa581c7e8e8bcc3c1 546 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 258 271 - T 14-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 PhaeoP54_02700 b5433f9b64ad24ffa581c7e8e8bcc3c1 546 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 491 508 - T 14-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 PhaeoP54_02700 b5433f9b64ad24ffa581c7e8e8bcc3c1 546 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 41 518 40.103 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 PhaeoP54_02700 b5433f9b64ad24ffa581c7e8e8bcc3c1 546 PRINTS PR00662 Glucose-6-phosphate isomerase signature 145 164 2.5E-53 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 PhaeoP54_02700 b5433f9b64ad24ffa581c7e8e8bcc3c1 546 PRINTS PR00662 Glucose-6-phosphate isomerase signature 331 352 2.5E-53 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 PhaeoP54_02700 b5433f9b64ad24ffa581c7e8e8bcc3c1 546 PRINTS PR00662 Glucose-6-phosphate isomerase signature 459 477 2.5E-53 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 PhaeoP54_02700 b5433f9b64ad24ffa581c7e8e8bcc3c1 546 PRINTS PR00662 Glucose-6-phosphate isomerase signature 254 272 2.5E-53 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 PhaeoP54_02700 b5433f9b64ad24ffa581c7e8e8bcc3c1 546 PRINTS PR00662 Glucose-6-phosphate isomerase signature 477 491 2.5E-53 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 PhaeoP54_02700 b5433f9b64ad24ffa581c7e8e8bcc3c1 546 PRINTS PR00662 Glucose-6-phosphate isomerase signature 491 504 2.5E-53 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 PhaeoP54_03794 90eb40f0a1c49b1c1039079826b2beac 258 Pfam PF00005 ABC transporter 19 148 1.2E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PhaeoP54_03794 90eb40f0a1c49b1c1039079826b2beac 258 ProSitePatterns PS00211 ABC transporters family signature. 120 134 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PhaeoP54_03794 90eb40f0a1c49b1c1039079826b2beac 258 SMART SM00382 28 196 5.2E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_03794 90eb40f0a1c49b1c1039079826b2beac 258 SUPERFAMILY SSF52540 4 213 5.8E-53 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_03794 90eb40f0a1c49b1c1039079826b2beac 258 Gene3D G3DSA:3.40.50.300 1 239 1.3E-58 T 14-10-2018 PhaeoP54_02780 2c890e521afb677181f6fe6affcae862 591 Gene3D G3DSA:3.40.50.1220 183 365 1.6E-44 T 14-10-2018 PhaeoP54_02780 2c890e521afb677181f6fe6affcae862 591 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 442 461 - T 14-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 PhaeoP54_02780 2c890e521afb677181f6fe6affcae862 591 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 3 168 3.3E-43 T 14-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 PhaeoP54_02780 2c890e521afb677181f6fe6affcae862 591 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 188 322 9.7E-33 T 14-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 PhaeoP54_02780 2c890e521afb677181f6fe6affcae862 591 TIGRFAM TIGR03457 sulphoacet_xsc: sulfoacetaldehyde acetyltransferase 2 583 4.7E-276 T 14-10-2018 IPR017820 Sulphoacetaldehyde acetyltransferase GO:0000287|GO:0005737|GO:0019529|GO:0030976|GO:0050487 KEGG: 00430+2.3.3.15|MetaCyc: PWY-1281|MetaCyc: PWY-6637 PhaeoP54_02780 2c890e521afb677181f6fe6affcae862 591 Gene3D G3DSA:3.40.50.970 374 573 7.0E-43 T 14-10-2018 PhaeoP54_02780 2c890e521afb677181f6fe6affcae862 591 SUPERFAMILY SSF52518 1 179 3.28E-43 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold PhaeoP54_02780 2c890e521afb677181f6fe6affcae862 591 SUPERFAMILY SSF52467 153 359 2.91E-41 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily PhaeoP54_02780 2c890e521afb677181f6fe6affcae862 591 Gene3D G3DSA:3.40.50.970 1 174 2.1E-47 T 14-10-2018 PhaeoP54_02780 2c890e521afb677181f6fe6affcae862 591 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 405 556 1.8E-26 T 14-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 PhaeoP54_02780 2c890e521afb677181f6fe6affcae862 591 SUPERFAMILY SSF52518 379 586 6.53E-45 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold PhaeoP54_00823 282eaff6b8cccc9174770c52d7299c9c 476 SUPERFAMILY SSF52172 4 134 3.7E-21 T 14-10-2018 IPR011006 CheY-like superfamily PhaeoP54_00823 282eaff6b8cccc9174770c52d7299c9c 476 SUPERFAMILY SSF52172 168 286 2.64E-9 T 14-10-2018 IPR011006 CheY-like superfamily PhaeoP54_00823 282eaff6b8cccc9174770c52d7299c9c 476 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 292 472 2.7E-42 T 14-10-2018 IPR000160 GGDEF domain PhaeoP54_00823 282eaff6b8cccc9174770c52d7299c9c 476 SMART SM00448 3 116 2.7E-5 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PhaeoP54_00823 282eaff6b8cccc9174770c52d7299c9c 476 Pfam PF00072 Response regulator receiver domain 5 116 1.7E-7 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PhaeoP54_00823 282eaff6b8cccc9174770c52d7299c9c 476 Gene3D G3DSA:3.30.70.270 292 473 3.5E-51 T 14-10-2018 PhaeoP54_00823 282eaff6b8cccc9174770c52d7299c9c 476 SUPERFAMILY SSF55073 298 471 2.59E-41 T 14-10-2018 IPR029787 Nucleotide cyclase PhaeoP54_00823 282eaff6b8cccc9174770c52d7299c9c 476 SMART SM00267 279 472 3.6E-52 T 14-10-2018 IPR000160 GGDEF domain PhaeoP54_00823 282eaff6b8cccc9174770c52d7299c9c 476 Gene3D G3DSA:3.40.50.12740 2 291 4.3E-46 T 14-10-2018 PhaeoP54_00823 282eaff6b8cccc9174770c52d7299c9c 476 Pfam PF00990 Diguanylate cyclase, GGDEF domain 294 468 9.0E-41 T 14-10-2018 IPR000160 GGDEF domain PhaeoP54_01096 667e4cce065fba4daa66a160b4c957e6 369 SUPERFAMILY SSF51283 178 343 1.96E-26 T 14-10-2018 IPR036157 dUTPase-like superfamily PhaeoP54_01096 667e4cce065fba4daa66a160b4c957e6 369 SUPERFAMILY SSF51283 15 174 9.95E-29 T 14-10-2018 IPR036157 dUTPase-like superfamily PhaeoP54_01096 667e4cce065fba4daa66a160b4c957e6 369 Gene3D G3DSA:2.70.40.10 5 175 2.4E-51 T 14-10-2018 IPR036157 dUTPase-like superfamily PhaeoP54_01096 667e4cce065fba4daa66a160b4c957e6 369 Pfam PF06559 2'-deoxycytidine 5'-triphosphate deaminase (DCD) 13 367 8.5E-168 T 14-10-2018 IPR010550 Deoxycytidine triphosphate deaminase, bacterial GO:0008829|GO:0009394 PhaeoP54_01096 667e4cce065fba4daa66a160b4c957e6 369 Gene3D G3DSA:2.70.40.10 176 344 5.7E-61 T 14-10-2018 IPR036157 dUTPase-like superfamily PhaeoP54_02237 6ee458b61ae32ff21f94f11161b5d17a 194 Gene3D G3DSA:1.10.101.10 128 180 2.8E-8 T 14-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 PhaeoP54_02237 6ee458b61ae32ff21f94f11161b5d17a 194 SUPERFAMILY SSF47090 128 175 1.54E-8 T 14-10-2018 IPR036365 PGBD-like superfamily PhaeoP54_02237 6ee458b61ae32ff21f94f11161b5d17a 194 Pfam PF01471 Putative peptidoglycan binding domain 136 173 6.7E-6 T 14-10-2018 IPR002477 Peptidoglycan binding-like PhaeoP54_04043 9e37777a2b92bd818a570cd5253b5635 383 Pfam PF03275 UDP-galactopyranose mutase 149 348 1.2E-76 T 14-10-2018 IPR015899 UDP-galactopyranose mutase, C-terminal GO:0008767 KEGG: 00052+5.4.99.9|KEGG: 00520+5.4.99.9|MetaCyc: PWY-6397|MetaCyc: PWY-7328|MetaCyc: PWY-7622 PhaeoP54_04043 9e37777a2b92bd818a570cd5253b5635 383 SUPERFAMILY SSF51971 2 368 7.06E-48 T 14-10-2018 PhaeoP54_04043 9e37777a2b92bd818a570cd5253b5635 383 Pfam PF13450 NAD(P)-binding Rossmann-like domain 2 67 3.7E-17 T 14-10-2018 PhaeoP54_04043 9e37777a2b92bd818a570cd5253b5635 383 TIGRFAM TIGR00031 UDP-GALP_mutase: UDP-galactopyranose mutase 1 364 2.9E-93 T 14-10-2018 IPR004379 UDP-galactopyranose mutase GO:0008767 KEGG: 00052+5.4.99.9|KEGG: 00520+5.4.99.9|MetaCyc: PWY-6397|MetaCyc: PWY-7328|MetaCyc: PWY-7622 PhaeoP54_04043 9e37777a2b92bd818a570cd5253b5635 383 SUPERFAMILY SSF54373 247 315 6.47E-26 T 14-10-2018 PhaeoP54_04043 9e37777a2b92bd818a570cd5253b5635 383 Gene3D G3DSA:3.40.50.720 136 263 3.3E-24 T 14-10-2018 PhaeoP54_04043 9e37777a2b92bd818a570cd5253b5635 383 Gene3D G3DSA:3.40.50.720 1 127 8.0E-27 T 14-10-2018 PhaeoP54_04043 9e37777a2b92bd818a570cd5253b5635 383 Gene3D G3DSA:3.40.50.720 294 372 2.6E-15 T 14-10-2018 PhaeoP54_00739 474d1c9a5cdd75a7cd149b49c0593559 253 SUPERFAMILY SSF51735 7 252 3.2E-75 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PhaeoP54_00739 474d1c9a5cdd75a7cd149b49c0593559 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 9.0E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_00739 474d1c9a5cdd75a7cd149b49c0593559 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 85 96 9.0E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_00739 474d1c9a5cdd75a7cd149b49c0593559 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 9.0E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_00739 474d1c9a5cdd75a7cd149b49c0593559 253 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 145 173 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 PhaeoP54_00739 474d1c9a5cdd75a7cd149b49c0593559 253 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 13 189 0.0024 T 14-10-2018 PhaeoP54_00739 474d1c9a5cdd75a7cd149b49c0593559 253 Gene3D G3DSA:3.40.50.720 5 253 1.1E-74 T 14-10-2018 PhaeoP54_00739 474d1c9a5cdd75a7cd149b49c0593559 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 4.2E-28 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_00739 474d1c9a5cdd75a7cd149b49c0593559 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 4.2E-28 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_00739 474d1c9a5cdd75a7cd149b49c0593559 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 14 31 4.2E-28 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_00739 474d1c9a5cdd75a7cd149b49c0593559 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 4.2E-28 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_00739 474d1c9a5cdd75a7cd149b49c0593559 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 4.2E-28 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_00739 474d1c9a5cdd75a7cd149b49c0593559 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 85 96 4.2E-28 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_00739 474d1c9a5cdd75a7cd149b49c0593559 253 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 19 251 1.4E-56 T 14-10-2018 PhaeoP54_00890 25305430b3e46b8f87265989e1f99e7c 156 Gene3D G3DSA:3.40.50.720 1 146 6.8E-41 T 14-10-2018 PhaeoP54_00890 25305430b3e46b8f87265989e1f99e7c 156 SUPERFAMILY SSF51735 5 138 3.49E-41 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PhaeoP54_00890 25305430b3e46b8f87265989e1f99e7c 156 SMART SM00881 12 109 3.6E-18 T 14-10-2018 IPR003781 CoA-binding GO:0048037 PhaeoP54_00890 25305430b3e46b8f87265989e1f99e7c 156 Pfam PF13380 CoA binding domain 17 135 1.1E-36 T 14-10-2018 IPR003781 CoA-binding GO:0048037 PhaeoP54_00834 37d4ef29ad0c9bc1a60fa67a05c1a813 428 Pfam PF01842 ACT domain 349 412 3.2E-11 T 14-10-2018 IPR002912 ACT domain PhaeoP54_00834 37d4ef29ad0c9bc1a60fa67a05c1a813 428 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 11 131 9.2E-17 T 14-10-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 PhaeoP54_00834 37d4ef29ad0c9bc1a60fa67a05c1a813 428 SUPERFAMILY SSF55021 348 416 1.73E-12 T 14-10-2018 PhaeoP54_00834 37d4ef29ad0c9bc1a60fa67a05c1a813 428 Gene3D G3DSA:3.30.360.10 138 343 4.4E-136 T 14-10-2018 PhaeoP54_00834 37d4ef29ad0c9bc1a60fa67a05c1a813 428 PIRSF PIRSF000098 2 428 9.1E-139 T 14-10-2018 IPR016204 Homoserine dehydrogenase GO:0004412|GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 PhaeoP54_00834 37d4ef29ad0c9bc1a60fa67a05c1a813 428 Gene3D G3DSA:3.30.70.260 344 416 4.4E-136 T 14-10-2018 PhaeoP54_00834 37d4ef29ad0c9bc1a60fa67a05c1a813 428 Gene3D G3DSA:3.40.50.720 6 336 4.4E-136 T 14-10-2018 PhaeoP54_00834 37d4ef29ad0c9bc1a60fa67a05c1a813 428 Pfam PF00742 Homoserine dehydrogenase 139 316 5.0E-56 T 14-10-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 PhaeoP54_00834 37d4ef29ad0c9bc1a60fa67a05c1a813 428 SUPERFAMILY SSF51735 4 142 5.91E-32 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PhaeoP54_00834 37d4ef29ad0c9bc1a60fa67a05c1a813 428 SUPERFAMILY SSF55347 139 304 8.5E-47 T 14-10-2018 PhaeoP54_00712 17e02964df63ae8350d757a42ce58624 614 Gene3D G3DSA:1.10.1370.20 244 614 6.0E-114 T 14-10-2018 PhaeoP54_00712 17e02964df63ae8350d757a42ce58624 614 SUPERFAMILY SSF55486 32 599 1.73E-110 T 14-10-2018 PhaeoP54_00712 17e02964df63ae8350d757a42ce58624 614 Pfam PF08439 Oligopeptidase F 136 204 5.9E-17 T 14-10-2018 IPR013647 Oligopeptidase F, N-terminal domain PhaeoP54_00712 17e02964df63ae8350d757a42ce58624 614 TIGRFAM TIGR02290 M3_fam_3: oligoendopeptidase, pepF/M3 family 33 612 3.6E-184 T 14-10-2018 IPR011977 Peptidase M3B, oligoendopeptidase-related clade 3 PhaeoP54_00712 17e02964df63ae8350d757a42ce58624 614 Pfam PF01432 Peptidase family M3 222 599 1.7E-34 T 14-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 PhaeoP54_00712 17e02964df63ae8350d757a42ce58624 614 Gene3D G3DSA:1.20.140.70 46 197 3.0E-16 T 14-10-2018 PhaeoP54_00133 55b938407645b6049814871a00936e29 278 Gene3D G3DSA:1.10.10.10 2 62 3.4E-9 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_00133 55b938407645b6049814871a00936e29 278 SUPERFAMILY SSF46785 7 69 4.3E-11 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_00133 55b938407645b6049814871a00936e29 278 Pfam PF08220 DeoR-like helix-turn-helix domain 12 62 1.2E-10 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 PhaeoP54_00133 55b938407645b6049814871a00936e29 278 SUPERFAMILY SSF100950 78 238 4.29E-23 T 14-10-2018 IPR037171 NagB/RpiA transferase-like PhaeoP54_00133 55b938407645b6049814871a00936e29 278 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 29 43 1.1E-8 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 PhaeoP54_00133 55b938407645b6049814871a00936e29 278 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 43 61 1.1E-8 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 PhaeoP54_00133 55b938407645b6049814871a00936e29 278 SMART SM01134 77 238 2.8E-40 T 14-10-2018 PhaeoP54_00133 55b938407645b6049814871a00936e29 278 SMART SM00420 10 63 2.0E-7 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 PhaeoP54_00133 55b938407645b6049814871a00936e29 278 Pfam PF00455 DeoR C terminal sensor domain 80 236 3.2E-37 T 14-10-2018 IPR014036 DeoR C-terminal sensor domain PhaeoP54_02720 ed55f8c11ec7f7bc40c9aae98760034f 306 Pfam PF02653 Branched-chain amino acid transport system / permease component 12 284 1.4E-36 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 PhaeoP54_02924 2b687b6b7d90a6199dffc7b847ee4a3a 114 SUPERFAMILY SSF82607 15 108 6.67E-28 T 14-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily PhaeoP54_02924 2b687b6b7d90a6199dffc7b847ee4a3a 114 Pfam PF02575 YbaB/EbfC DNA-binding family 15 104 9.5E-29 T 14-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family PhaeoP54_02924 2b687b6b7d90a6199dffc7b847ee4a3a 114 PIRSF PIRSF004555 7 114 3.8E-34 T 14-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family PhaeoP54_02924 2b687b6b7d90a6199dffc7b847ee4a3a 114 Gene3D G3DSA:3.30.1310.10 4 114 2.6E-36 T 14-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily PhaeoP54_02924 2b687b6b7d90a6199dffc7b847ee4a3a 114 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 7 106 8.4E-24 T 14-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family PhaeoP54_02924 2b687b6b7d90a6199dffc7b847ee4a3a 114 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 9 101 20.051 T 14-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family PhaeoP54_00622 8a09f928ffe70ac0b4af02009c7e4c99 866 PIRSF PIRSF000853 30 859 8.2E-286 T 14-10-2018 IPR010121 Pyruvate, phosphate dikinase GO:0006090|GO:0050242 KEGG: 00620+2.7.9.1|KEGG: 00710+2.7.9.1|KEGG: 00720+2.7.9.1|MetaCyc: PWY-241|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117 PhaeoP54_00622 8a09f928ffe70ac0b4af02009c7e4c99 866 SUPERFAMILY SSF56059 21 362 5.65E-77 T 14-10-2018 PhaeoP54_00622 8a09f928ffe70ac0b4af02009c7e4c99 866 Gene3D G3DSA:1.10.189.10 328 511 2.9E-65 T 14-10-2018 PhaeoP54_00622 8a09f928ffe70ac0b4af02009c7e4c99 866 Pfam PF00391 PEP-utilising enzyme, mobile domain 403 485 3.5E-25 T 14-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 PhaeoP54_00622 8a09f928ffe70ac0b4af02009c7e4c99 866 SUPERFAMILY SSF51621 495 852 1.03E-122 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 PhaeoP54_00622 8a09f928ffe70ac0b4af02009c7e4c99 866 Gene3D G3DSA:3.20.20.60 514 854 6.2E-142 T 14-10-2018 PhaeoP54_00622 8a09f928ffe70ac0b4af02009c7e4c99 866 Gene3D G3DSA:3.50.30.10 366 491 2.9E-65 T 14-10-2018 PhaeoP54_00622 8a09f928ffe70ac0b4af02009c7e4c99 866 SUPERFAMILY SSF52009 367 494 3.92E-36 T 14-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 PhaeoP54_00622 8a09f928ffe70ac0b4af02009c7e4c99 866 Gene3D G3DSA:3.30.470.20 222 324 5.0E-9 T 14-10-2018 PhaeoP54_00622 8a09f928ffe70ac0b4af02009c7e4c99 866 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 499 850 2.7E-82 T 14-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 PhaeoP54_02640 074f43e0b7ddcb62a04b1948a384130d 442 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 222 254 - T 14-10-2018 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23 PhaeoP54_02640 074f43e0b7ddcb62a04b1948a384130d 442 Pfam PF00815 Histidinol dehydrogenase 16 421 2.2E-130 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 PhaeoP54_02640 074f43e0b7ddcb62a04b1948a384130d 442 SUPERFAMILY SSF53720 23 421 7.85E-67 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 PhaeoP54_02640 074f43e0b7ddcb62a04b1948a384130d 442 Gene3D G3DSA:3.40.50.1980 226 342 8.0E-101 T 14-10-2018 PhaeoP54_02640 074f43e0b7ddcb62a04b1948a384130d 442 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 3 421 30.58 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 PhaeoP54_02640 074f43e0b7ddcb62a04b1948a384130d 442 Gene3D G3DSA:3.40.50.1980 25 224 8.0E-101 T 14-10-2018 PhaeoP54_02640 074f43e0b7ddcb62a04b1948a384130d 442 PIRSF PIRSF000099 5 424 6.9E-111 T 14-10-2018 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 PhaeoP54_02640 074f43e0b7ddcb62a04b1948a384130d 442 PRINTS PR00083 Histidinol dehydrogenase signature 101 128 7.4E-61 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 PhaeoP54_02640 074f43e0b7ddcb62a04b1948a384130d 442 PRINTS PR00083 Histidinol dehydrogenase signature 193 218 7.4E-61 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 PhaeoP54_02640 074f43e0b7ddcb62a04b1948a384130d 442 PRINTS PR00083 Histidinol dehydrogenase signature 222 243 7.4E-61 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 PhaeoP54_02640 074f43e0b7ddcb62a04b1948a384130d 442 PRINTS PR00083 Histidinol dehydrogenase signature 354 372 7.4E-61 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 PhaeoP54_02640 074f43e0b7ddcb62a04b1948a384130d 442 PRINTS PR00083 Histidinol dehydrogenase signature 26 50 7.4E-61 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 PhaeoP54_02640 074f43e0b7ddcb62a04b1948a384130d 442 PRINTS PR00083 Histidinol dehydrogenase signature 313 338 7.4E-61 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 PhaeoP54_02640 074f43e0b7ddcb62a04b1948a384130d 442 PRINTS PR00083 Histidinol dehydrogenase signature 163 189 7.4E-61 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 PhaeoP54_02640 074f43e0b7ddcb62a04b1948a384130d 442 PRINTS PR00083 Histidinol dehydrogenase signature 244 263 7.4E-61 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 PhaeoP54_02640 074f43e0b7ddcb62a04b1948a384130d 442 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 26 420 1.4E-127 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 PhaeoP54_01688 dc2ff7c162ab20cc11810a17d433e4aa 147 SUPERFAMILY SSF82093 31 136 2.75E-36 T 14-10-2018 IPR036127 CcmE-like superfamily GO:0005886|GO:0017003|GO:0017004 PhaeoP54_01688 dc2ff7c162ab20cc11810a17d433e4aa 147 Gene3D G3DSA:2.40.50.140 31 136 1.1E-33 T 14-10-2018 PhaeoP54_01688 dc2ff7c162ab20cc11810a17d433e4aa 147 Pfam PF03100 CcmE 6 130 5.7E-40 T 14-10-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004|GO:0020037 PhaeoP54_01688 dc2ff7c162ab20cc11810a17d433e4aa 147 Hamap MF_01959 Cytochrome c-type biogenesis protein CcmE [ccmE]. 3 140 30.153 T 14-10-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004|GO:0020037 PhaeoP54_01567 8c3322ae23e4b41ad8624b143af6c24b 393 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 21 387 7.1E-101 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 PhaeoP54_01567 8c3322ae23e4b41ad8624b143af6c24b 393 SUPERFAMILY SSF53383 26 389 1.3E-98 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PhaeoP54_01567 8c3322ae23e4b41ad8624b143af6c24b 393 Gene3D G3DSA:3.40.640.10 10 252 7.4E-76 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PhaeoP54_01567 8c3322ae23e4b41ad8624b143af6c24b 393 PIRSF PIRSF001434 2 392 4.5E-114 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 PhaeoP54_01567 8c3322ae23e4b41ad8624b143af6c24b 393 Gene3D G3DSA:3.90.1150.10 257 393 1.9E-33 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 PhaeoP54_03021 41f5c22d20cac1579394ce69539cfda8 122 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 14-10-2018 IPR019972 Ribosomal protein L14P, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PhaeoP54_03021 41f5c22d20cac1579394ce69539cfda8 122 SUPERFAMILY SSF50193 1 122 3.01E-52 T 14-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 PhaeoP54_03021 41f5c22d20cac1579394ce69539cfda8 122 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 122 27.867 T 14-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 PhaeoP54_03021 41f5c22d20cac1579394ce69539cfda8 122 SMART SM01374 1 122 5.1E-87 T 14-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 PhaeoP54_03021 41f5c22d20cac1579394ce69539cfda8 122 Gene3D G3DSA:2.40.150.20 1 122 5.0E-55 T 14-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 PhaeoP54_03021 41f5c22d20cac1579394ce69539cfda8 122 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 122 1.7E-58 T 14-10-2018 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 PhaeoP54_03021 41f5c22d20cac1579394ce69539cfda8 122 Pfam PF00238 Ribosomal protein L14p/L23e 1 122 4.1E-56 T 14-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 PhaeoP54_02600 e07438fc4f741152a4e82da3ee746843 59 Pfam PF13396 Phospholipase_D-nuclease N-terminal 14 56 7.8E-12 T 14-10-2018 IPR027379 Cardiolipin synthase N-terminal PhaeoP54_00163 1972baf239812a4df40bb1157d753fd2 285 SMART SM00869 37 271 5.0E-13 T 14-10-2018 IPR005546 Autotransporter beta-domain PhaeoP54_00163 1972baf239812a4df40bb1157d753fd2 285 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 85 285 3.8E-17 T 14-10-2018 IPR006315 Outer membrane autotransporter barrel GO:0019867 PhaeoP54_00163 1972baf239812a4df40bb1157d753fd2 285 Gene3D G3DSA:2.40.128.130 44 285 9.9E-29 T 14-10-2018 IPR036709 Autotransporter beta-domain superfamily PhaeoP54_00163 1972baf239812a4df40bb1157d753fd2 285 Pfam PF03797 Autotransporter beta-domain 85 246 2.4E-21 T 14-10-2018 IPR005546 Autotransporter beta-domain PhaeoP54_00163 1972baf239812a4df40bb1157d753fd2 285 SUPERFAMILY SSF103515 76 285 2.62E-25 T 14-10-2018 IPR036709 Autotransporter beta-domain superfamily PhaeoP54_01040 ecefb7e20fbc94ff79dee005a1f3926c 229 Pfam PF13280 WYL domain 137 220 8.6E-16 T 14-10-2018 IPR026881 WYL domain PhaeoP54_01040 ecefb7e20fbc94ff79dee005a1f3926c 229 Gene3D G3DSA:1.10.10.10 1 62 1.8E-13 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_01040 ecefb7e20fbc94ff79dee005a1f3926c 229 SUPERFAMILY SSF46785 1 61 9.67E-13 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_01040 ecefb7e20fbc94ff79dee005a1f3926c 229 Pfam PF08279 HTH domain 6 58 5.9E-15 T 14-10-2018 IPR013196 Helix-turn-helix, type 11 PhaeoP54_00568 0331cf6fd5486521d437ca154392741b 637 Gene3D G3DSA:1.10.8.60 325 398 4.0E-30 T 14-10-2018 PhaeoP54_00568 0331cf6fd5486521d437ca154392741b 637 SUPERFAMILY SSF52540 143 393 1.88E-74 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_00568 0331cf6fd5486521d437ca154392741b 637 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 191 322 5.4E-45 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 PhaeoP54_00568 0331cf6fd5486521d437ca154392741b 637 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 103 593 6.1E-221 T 14-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 PhaeoP54_00568 0331cf6fd5486521d437ca154392741b 637 Gene3D G3DSA:3.40.50.300 138 324 1.2E-70 T 14-10-2018 PhaeoP54_00568 0331cf6fd5486521d437ca154392741b 637 Pfam PF06480 FtsH Extracellular 8 77 9.2E-12 T 14-10-2018 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 Reactome: R-HSA-8949664 PhaeoP54_00568 0331cf6fd5486521d437ca154392741b 637 Pfam PF01434 Peptidase family M41 383 591 5.9E-69 T 14-10-2018 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 PhaeoP54_00568 0331cf6fd5486521d437ca154392741b 637 SUPERFAMILY SSF140990 404 598 1.57E-61 T 14-10-2018 IPR037219 Peptidase M41-like GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 PhaeoP54_00568 0331cf6fd5486521d437ca154392741b 637 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 5 604 36.105 T 14-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 PhaeoP54_00568 0331cf6fd5486521d437ca154392741b 637 Gene3D G3DSA:1.20.58.760 399 598 7.4E-65 T 14-10-2018 PhaeoP54_00568 0331cf6fd5486521d437ca154392741b 637 ProSitePatterns PS00674 AAA-protein family signature. 293 311 - T 14-10-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 PhaeoP54_00568 0331cf6fd5486521d437ca154392741b 637 SMART SM00382 186 325 1.2E-23 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_00007 6a09597122533e1a70c01483e4809c8a 805 Gene3D G3DSA:3.30.230.10 229 400 5.7E-72 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PhaeoP54_00007 6a09597122533e1a70c01483e4809c8a 805 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 8 805 99.974 T 14-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 PhaeoP54_00007 6a09597122533e1a70c01483e4809c8a 805 SMART SM00433 41 798 5.3E-253 T 14-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 PhaeoP54_00007 6a09597122533e1a70c01483e4809c8a 805 SUPERFAMILY SSF55874 11 217 8.12E-69 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PhaeoP54_00007 6a09597122533e1a70c01483e4809c8a 805 SMART SM00387 37 182 3.3E-26 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PhaeoP54_00007 6a09597122533e1a70c01483e4809c8a 805 Gene3D G3DSA:3.30.565.10 8 228 9.7E-86 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PhaeoP54_00007 6a09597122533e1a70c01483e4809c8a 805 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 733 794 3.1E-28 T 14-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 PhaeoP54_00007 6a09597122533e1a70c01483e4809c8a 805 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 11 804 1.3E-300 T 14-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 PhaeoP54_00007 6a09597122533e1a70c01483e4809c8a 805 ProSitePatterns PS00177 DNA topoisomerase II signature. 430 438 - T 14-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 PhaeoP54_00007 6a09597122533e1a70c01483e4809c8a 805 SUPERFAMILY SSF56719 402 796 6.54E-84 T 14-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 PhaeoP54_00007 6a09597122533e1a70c01483e4809c8a 805 PRINTS PR00418 DNA topoisomerase II family signature 76 89 2.7E-70 T 14-10-2018 PhaeoP54_00007 6a09597122533e1a70c01483e4809c8a 805 PRINTS PR00418 DNA topoisomerase II family signature 428 442 2.7E-70 T 14-10-2018 PhaeoP54_00007 6a09597122533e1a70c01483e4809c8a 805 PRINTS PR00418 DNA topoisomerase II family signature 737 753 2.7E-70 T 14-10-2018 PhaeoP54_00007 6a09597122533e1a70c01483e4809c8a 805 PRINTS PR00418 DNA topoisomerase II family signature 533 545 2.7E-70 T 14-10-2018 PhaeoP54_00007 6a09597122533e1a70c01483e4809c8a 805 PRINTS PR00418 DNA topoisomerase II family signature 41 56 2.7E-70 T 14-10-2018 PhaeoP54_00007 6a09597122533e1a70c01483e4809c8a 805 PRINTS PR00418 DNA topoisomerase II family signature 119 133 2.7E-70 T 14-10-2018 PhaeoP54_00007 6a09597122533e1a70c01483e4809c8a 805 PRINTS PR00418 DNA topoisomerase II family signature 513 530 2.7E-70 T 14-10-2018 PhaeoP54_00007 6a09597122533e1a70c01483e4809c8a 805 PRINTS PR00418 DNA topoisomerase II family signature 276 289 2.7E-70 T 14-10-2018 PhaeoP54_00007 6a09597122533e1a70c01483e4809c8a 805 PRINTS PR00418 DNA topoisomerase II family signature 495 511 2.7E-70 T 14-10-2018 PhaeoP54_00007 6a09597122533e1a70c01483e4809c8a 805 Gene3D G3DSA:3.40.50.670 710 804 2.6E-24 T 14-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 PhaeoP54_00007 6a09597122533e1a70c01483e4809c8a 805 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 38 176 1.6E-19 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PhaeoP54_00007 6a09597122533e1a70c01483e4809c8a 805 SUPERFAMILY SSF54211 229 399 3.03E-61 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold PhaeoP54_00007 6a09597122533e1a70c01483e4809c8a 805 Pfam PF00204 DNA gyrase B 229 398 1.3E-60 T 14-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 PhaeoP54_00007 6a09597122533e1a70c01483e4809c8a 805 Gene3D G3DSA:3.40.50.670 406 577 1.3E-69 T 14-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 PhaeoP54_00007 6a09597122533e1a70c01483e4809c8a 805 PRINTS PR01159 DNA gyrase subunit B signature 187 202 4.4E-73 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 PhaeoP54_00007 6a09597122533e1a70c01483e4809c8a 805 PRINTS PR01159 DNA gyrase subunit B signature 774 790 4.4E-73 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 PhaeoP54_00007 6a09597122533e1a70c01483e4809c8a 805 PRINTS PR01159 DNA gyrase subunit B signature 228 250 4.4E-73 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 PhaeoP54_00007 6a09597122533e1a70c01483e4809c8a 805 PRINTS PR01159 DNA gyrase subunit B signature 320 336 4.4E-73 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 PhaeoP54_00007 6a09597122533e1a70c01483e4809c8a 805 PRINTS PR01159 DNA gyrase subunit B signature 368 382 4.4E-73 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 PhaeoP54_00007 6a09597122533e1a70c01483e4809c8a 805 PRINTS PR01159 DNA gyrase subunit B signature 382 402 4.4E-73 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 PhaeoP54_00007 6a09597122533e1a70c01483e4809c8a 805 PRINTS PR01159 DNA gyrase subunit B signature 478 487 4.4E-73 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 PhaeoP54_00007 6a09597122533e1a70c01483e4809c8a 805 PRINTS PR01159 DNA gyrase subunit B signature 758 770 4.4E-73 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 PhaeoP54_00007 6a09597122533e1a70c01483e4809c8a 805 PRINTS PR01159 DNA gyrase subunit B signature 202 215 4.4E-73 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 PhaeoP54_00007 6a09597122533e1a70c01483e4809c8a 805 PRINTS PR01159 DNA gyrase subunit B signature 11 21 4.4E-73 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 PhaeoP54_00007 6a09597122533e1a70c01483e4809c8a 805 Pfam PF01751 Toprim domain 427 538 2.7E-14 T 14-10-2018 IPR006171 TOPRIM domain PhaeoP54_01660 d2dfccdde1db82bf4a448a671f919b04 1214 PRINTS PR01183 Ribonucleotide reductase large chain signature 268 287 3.2E-5 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 PhaeoP54_01660 d2dfccdde1db82bf4a448a671f919b04 1214 PRINTS PR01183 Ribonucleotide reductase large chain signature 534 556 3.2E-5 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 PhaeoP54_01660 d2dfccdde1db82bf4a448a671f919b04 1214 Pfam PF02867 Ribonucleotide reductase, barrel domain 810 904 7.5E-16 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 PhaeoP54_01660 d2dfccdde1db82bf4a448a671f919b04 1214 Pfam PF02867 Ribonucleotide reductase, barrel domain 191 740 2.4E-104 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 PhaeoP54_01660 d2dfccdde1db82bf4a448a671f919b04 1214 SUPERFAMILY SSF75625 289 380 3.4E-13 T 14-10-2018 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PhaeoP54_01660 d2dfccdde1db82bf4a448a671f919b04 1214 Pfam PF08471 Class II vitamin B12-dependent ribonucleotide reductase 31 140 3.7E-37 T 14-10-2018 IPR013678 Ribonucleotide reductase class II vitamin B12-dependent, N-terminal domain GO:0004748|GO:0050897|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 PhaeoP54_01660 d2dfccdde1db82bf4a448a671f919b04 1214 TIGRFAM TIGR02504 NrdJ_Z: ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent 122 741 7.5E-140 T 14-10-2018 IPR013344 Ribonucleotide reductase, adenosylcobalamin-dependent GO:0000166|GO:0004748|GO:0031419|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 PhaeoP54_01660 d2dfccdde1db82bf4a448a671f919b04 1214 SUPERFAMILY SSF51998 190 915 2.14E-121 T 14-10-2018 PhaeoP54_01660 d2dfccdde1db82bf4a448a671f919b04 1214 Gene3D G3DSA:3.20.70.20 369 767 1.1E-92 T 14-10-2018 PhaeoP54_01660 d2dfccdde1db82bf4a448a671f919b04 1214 Gene3D G3DSA:3.20.70.20 783 919 3.5E-28 T 14-10-2018 PhaeoP54_01660 d2dfccdde1db82bf4a448a671f919b04 1214 Gene3D G3DSA:3.20.70.20 86 339 1.4E-55 T 14-10-2018 PhaeoP54_03423 c5ab38bc7a41271f33221dea9dedb77c 333 Gene3D G3DSA:3.55.30.10 6 194 2.6E-51 T 14-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 PhaeoP54_03423 c5ab38bc7a41271f33221dea9dedb77c 333 Gene3D G3DSA:1.10.287.480 218 266 4.3E-9 T 14-10-2018 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain superfamily PhaeoP54_03423 c5ab38bc7a41271f33221dea9dedb77c 333 Gene3D G3DSA:3.90.1280.10 267 320 7.5E-13 T 14-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 PhaeoP54_03423 c5ab38bc7a41271f33221dea9dedb77c 333 SUPERFAMILY SSF64397 10 273 1.24E-59 T 14-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 PhaeoP54_03423 c5ab38bc7a41271f33221dea9dedb77c 333 SUPERFAMILY SSF118352 266 318 3.01E-13 T 14-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 PhaeoP54_03423 c5ab38bc7a41271f33221dea9dedb77c 333 Pfam PF01430 Hsp33 protein 11 313 9.4E-78 T 14-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 PhaeoP54_03423 c5ab38bc7a41271f33221dea9dedb77c 333 PIRSF PIRSF005261 1 326 7.0E-82 T 14-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 PhaeoP54_02662 9d25b3a37e5990df2ec1e391b0a90f41 656 Pfam PF00672 HAMP domain 337 382 8.9E-9 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 PhaeoP54_02662 9d25b3a37e5990df2ec1e391b0a90f41 656 SUPERFAMILY SSF55874 486 651 1.57E-32 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PhaeoP54_02662 9d25b3a37e5990df2ec1e391b0a90f41 656 Pfam PF00512 His Kinase A (phospho-acceptor) domain 429 492 5.2E-14 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PhaeoP54_02662 9d25b3a37e5990df2ec1e391b0a90f41 656 SUPERFAMILY SSF103190 145 298 1.67E-12 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily PhaeoP54_02662 9d25b3a37e5990df2ec1e391b0a90f41 656 Gene3D G3DSA:1.10.287.130 404 490 4.1E-21 T 14-10-2018 PhaeoP54_02662 9d25b3a37e5990df2ec1e391b0a90f41 656 SUPERFAMILY SSF158472 335 383 2.09E-7 T 14-10-2018 PhaeoP54_02662 9d25b3a37e5990df2ec1e391b0a90f41 656 SMART SM00387 538 653 5.9E-31 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PhaeoP54_02662 9d25b3a37e5990df2ec1e391b0a90f41 656 Gene3D G3DSA:3.30.565.10 498 655 2.4E-35 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PhaeoP54_02662 9d25b3a37e5990df2ec1e391b0a90f41 656 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 539 650 4.0E-17 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PhaeoP54_02662 9d25b3a37e5990df2ec1e391b0a90f41 656 PRINTS PR00344 Bacterial sensor protein C-terminal signature 609 627 5.4E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PhaeoP54_02662 9d25b3a37e5990df2ec1e391b0a90f41 656 PRINTS PR00344 Bacterial sensor protein C-terminal signature 579 593 5.4E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PhaeoP54_02662 9d25b3a37e5990df2ec1e391b0a90f41 656 PRINTS PR00344 Bacterial sensor protein C-terminal signature 637 650 5.4E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PhaeoP54_02662 9d25b3a37e5990df2ec1e391b0a90f41 656 PRINTS PR00344 Bacterial sensor protein C-terminal signature 597 607 5.4E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PhaeoP54_02662 9d25b3a37e5990df2ec1e391b0a90f41 656 SMART SM00304 333 386 5.9E-6 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 PhaeoP54_02662 9d25b3a37e5990df2ec1e391b0a90f41 656 SUPERFAMILY SSF47384 423 492 3.73E-11 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 PhaeoP54_02662 9d25b3a37e5990df2ec1e391b0a90f41 656 Gene3D G3DSA:1.20.1480.50 302 391 3.3E-10 T 14-10-2018 PhaeoP54_02662 9d25b3a37e5990df2ec1e391b0a90f41 656 Pfam PF17202 Single cache domain 3 195 305 6.5E-27 T 14-10-2018 IPR033463 Single cache domain 3 PhaeoP54_02662 9d25b3a37e5990df2ec1e391b0a90f41 656 SMART SM00388 428 495 6.2E-12 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PhaeoP54_02903 56896117439b2469161efb26d8cfc799 289 Gene3D G3DSA:1.20.58.1490 1 69 6.4E-22 T 14-10-2018 IPR038414 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal domain superfamily PhaeoP54_02903 56896117439b2469161efb26d8cfc799 289 SUPERFAMILY SSF46626 201 288 1.76E-23 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PhaeoP54_02903 56896117439b2469161efb26d8cfc799 289 Gene3D G3DSA:1.10.760.10 173 262 2.4E-68 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PhaeoP54_02903 56896117439b2469161efb26d8cfc799 289 Pfam PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP 13 57 3.0E-25 T 14-10-2018 IPR032858 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal PhaeoP54_02903 56896117439b2469161efb26d8cfc799 289 PRINTS PR00605 Class IC cytochrome C signature 260 282 3.3E-7 T 14-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 PhaeoP54_02903 56896117439b2469161efb26d8cfc799 289 PRINTS PR00605 Class IC cytochrome C signature 216 227 3.3E-7 T 14-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 PhaeoP54_02903 56896117439b2469161efb26d8cfc799 289 PIRSF PIRSF000006 1 289 4.1E-116 T 14-10-2018 IPR004678 Cytochrome c oxidase cbb3-type, subunit III PhaeoP54_02903 56896117439b2469161efb26d8cfc799 289 Gene3D G3DSA:1.10.760.10 81 285 2.4E-68 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PhaeoP54_02903 56896117439b2469161efb26d8cfc799 289 SUPERFAMILY SSF46626 30 201 2.07E-30 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PhaeoP54_02903 56896117439b2469161efb26d8cfc799 289 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 110 194 1.2E-11 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PhaeoP54_02903 56896117439b2469161efb26d8cfc799 289 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 206 282 1.2E-10 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PhaeoP54_02903 56896117439b2469161efb26d8cfc799 289 TIGRFAM TIGR00782 ccoP: cytochrome c oxidase, cbb3-type, subunit III 8 289 5.8E-124 T 14-10-2018 IPR004678 Cytochrome c oxidase cbb3-type, subunit III PhaeoP54_03180 eec45446832dcd70553ba95d2540145d 168 SUPERFAMILY SSF103247 45 142 4.97E-14 T 14-10-2018 IPR035923 TT1751-like domain superfamily PhaeoP54_01384 276c4982faa3c261e9b135782078bbea 805 Pfam PF01266 FAD dependent oxidoreductase 6 367 1.2E-58 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 PhaeoP54_01384 276c4982faa3c261e9b135782078bbea 805 Pfam PF16350 FAD dependent oxidoreductase central domain 370 423 9.1E-15 T 14-10-2018 IPR032503 FAD dependent oxidoreductase, central domain PhaeoP54_01384 276c4982faa3c261e9b135782078bbea 805 SUPERFAMILY SSF54373 220 327 1.1E-31 T 14-10-2018 PhaeoP54_01384 276c4982faa3c261e9b135782078bbea 805 Gene3D G3DSA:3.30.9.10 86 328 3.4E-136 T 14-10-2018 PhaeoP54_01384 276c4982faa3c261e9b135782078bbea 805 Gene3D G3DSA:3.30.1360.120 433 682 3.7E-90 T 14-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 PhaeoP54_01384 276c4982faa3c261e9b135782078bbea 805 Gene3D G3DSA:3.50.50.60 7 386 3.4E-136 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PhaeoP54_01384 276c4982faa3c261e9b135782078bbea 805 SUPERFAMILY SSF103025 419 715 9.58E-85 T 14-10-2018 PhaeoP54_01384 276c4982faa3c261e9b135782078bbea 805 Gene3D G3DSA:2.40.30.110 714 791 2.8E-19 T 14-10-2018 PhaeoP54_01384 276c4982faa3c261e9b135782078bbea 805 Pfam PF01571 Aminomethyltransferase folate-binding domain 427 692 1.5E-58 T 14-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain PhaeoP54_01384 276c4982faa3c261e9b135782078bbea 805 SUPERFAMILY SSF101790 718 805 1.96E-20 T 14-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal PhaeoP54_01384 276c4982faa3c261e9b135782078bbea 805 Gene3D G3DSA:3.30.70.1400 490 708 3.7E-90 T 14-10-2018 PhaeoP54_01384 276c4982faa3c261e9b135782078bbea 805 SUPERFAMILY SSF51905 5 389 3.37E-56 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PhaeoP54_01384 276c4982faa3c261e9b135782078bbea 805 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 701 790 1.4E-19 T 14-10-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 PhaeoP54_00437 a521363eac78ffb542953c2ec4df0c33 409 SUPERFAMILY SSF53901 214 407 4.11E-59 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 PhaeoP54_00437 a521363eac78ffb542953c2ec4df0c33 409 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 1 245 5.0E-44 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal PhaeoP54_00437 a521363eac78ffb542953c2ec4df0c33 409 Gene3D G3DSA:3.40.47.10 1 253 1.5E-66 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 PhaeoP54_00437 a521363eac78ffb542953c2ec4df0c33 409 Gene3D G3DSA:3.40.47.10 259 407 1.9E-43 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 PhaeoP54_00437 a521363eac78ffb542953c2ec4df0c33 409 SUPERFAMILY SSF53901 1 252 1.7E-65 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 PhaeoP54_00437 a521363eac78ffb542953c2ec4df0c33 409 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 153 169 - T 14-10-2018 IPR018201 Beta-ketoacyl synthase, active site PhaeoP54_00437 a521363eac78ffb542953c2ec4df0c33 409 SMART SM00825 Beta-ketoacyl synthase 4 409 4.0E-14 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain PhaeoP54_00437 a521363eac78ffb542953c2ec4df0c33 409 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 253 363 3.0E-30 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal PhaeoP54_00382 1243a1d30438344399d2e83081335714 697 Gene3D G3DSA:3.90.226.10 7 277 5.4E-70 T 14-10-2018 PhaeoP54_00382 1243a1d30438344399d2e83081335714 697 Gene3D G3DSA:1.10.1040.50 476 696 1.0E-71 T 14-10-2018 PhaeoP54_00382 1243a1d30438344399d2e83081335714 697 Pfam PF00378 Enoyl-CoA hydratase/isomerase 12 190 3.2E-30 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 PhaeoP54_00382 1243a1d30438344399d2e83081335714 697 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 91 111 - T 14-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 PhaeoP54_00382 1243a1d30438344399d2e83081335714 697 SUPERFAMILY SSF52096 3 279 2.49E-53 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily PhaeoP54_00382 1243a1d30438344399d2e83081335714 697 SUPERFAMILY SSF48179 472 584 1.02E-25 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 PhaeoP54_00382 1243a1d30438344399d2e83081335714 697 SUPERFAMILY SSF48179 599 689 7.57E-21 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 PhaeoP54_00382 1243a1d30438344399d2e83081335714 697 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 473 566 3.6E-21 T 14-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 PhaeoP54_00382 1243a1d30438344399d2e83081335714 697 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 603 687 4.0E-7 T 14-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 PhaeoP54_00382 1243a1d30438344399d2e83081335714 697 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 292 467 1.0E-57 T 14-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 PhaeoP54_00382 1243a1d30438344399d2e83081335714 697 SUPERFAMILY SSF51735 293 467 2.02E-49 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PhaeoP54_00382 1243a1d30438344399d2e83081335714 697 Gene3D G3DSA:3.40.50.720 280 475 5.4E-61 T 14-10-2018 PhaeoP54_02107 cfbe210305b5018e6901aa56338e2efd 55 Pfam PF00471 Ribosomal protein L33 7 53 7.4E-15 T 14-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PhaeoP54_02107 cfbe210305b5018e6901aa56338e2efd 55 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 1 55 8.1E-23 T 14-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PhaeoP54_02107 cfbe210305b5018e6901aa56338e2efd 55 ProSitePatterns PS00582 Ribosomal protein L33 signature. 21 40 - T 14-10-2018 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 PhaeoP54_02107 cfbe210305b5018e6901aa56338e2efd 55 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 2 53 12.771 T 14-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PhaeoP54_02107 cfbe210305b5018e6901aa56338e2efd 55 Gene3D G3DSA:2.20.28.120 1 55 4.7E-26 T 14-10-2018 IPR038584 Ribosomal protein L33 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PhaeoP54_02107 cfbe210305b5018e6901aa56338e2efd 55 SUPERFAMILY SSF57829 1 53 7.94E-17 T 14-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 PhaeoP54_01813 d5ce88149f39fa6dd6616e10b69253e3 418 SUPERFAMILY SSF82784 228 402 4.19E-43 T 14-10-2018 IPR036102 OsmC/Ohr superfamily PhaeoP54_01813 d5ce88149f39fa6dd6616e10b69253e3 418 Gene3D G3DSA:3.30.300.20 268 408 5.0E-35 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta PhaeoP54_01813 d5ce88149f39fa6dd6616e10b69253e3 418 SUPERFAMILY SSF53474 1 251 3.63E-41 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold PhaeoP54_01813 d5ce88149f39fa6dd6616e10b69253e3 418 Gene3D G3DSA:3.40.50.1820 2 253 1.8E-52 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold PhaeoP54_01813 d5ce88149f39fa6dd6616e10b69253e3 418 Pfam PF02566 OsmC-like protein 299 400 2.5E-16 T 14-10-2018 IPR003718 OsmC/Ohr family PhaeoP54_01813 d5ce88149f39fa6dd6616e10b69253e3 418 Pfam PF12146 Serine aminopeptidase, S33 49 133 1.6E-9 T 14-10-2018 IPR022742 Serine aminopeptidase, S33 PhaeoP54_00617 cb7ade5243a065e4daee05d6fb7ab45e 592 Pfam PF01471 Putative peptidoglycan binding domain 168 223 6.8E-9 T 14-10-2018 IPR002477 Peptidoglycan binding-like PhaeoP54_00617 cb7ade5243a065e4daee05d6fb7ab45e 592 Gene3D G3DSA:2.40.10.120 387 558 1.3E-12 T 14-10-2018 PhaeoP54_00617 cb7ade5243a065e4daee05d6fb7ab45e 592 SUPERFAMILY SSF47090 163 229 3.14E-12 T 14-10-2018 IPR036365 PGBD-like superfamily PhaeoP54_00617 cb7ade5243a065e4daee05d6fb7ab45e 592 Gene3D G3DSA:1.10.101.10 162 233 4.0E-9 T 14-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 PhaeoP54_00617 cb7ade5243a065e4daee05d6fb7ab45e 592 SUPERFAMILY SSF50494 390 555 2.87E-17 T 14-10-2018 IPR009003 Peptidase S1, PA clan PhaeoP54_00617 cb7ade5243a065e4daee05d6fb7ab45e 592 Pfam PF05036 Sporulation related domain 31 92 1.8E-5 T 14-10-2018 IPR007730 Sporulation-like domain GO:0042834 PhaeoP54_00617 cb7ade5243a065e4daee05d6fb7ab45e 592 Pfam PF13365 Trypsin-like peptidase domain 398 527 8.3E-10 T 14-10-2018 PhaeoP54_01228 1532c13f9cb240b39e63ca23bbf03a33 349 Pfam PF00034 Cytochrome c 246 345 6.3E-8 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PhaeoP54_01228 1532c13f9cb240b39e63ca23bbf03a33 349 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 60 140 1.5E-8 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PhaeoP54_01228 1532c13f9cb240b39e63ca23bbf03a33 349 SUPERFAMILY SSF46626 246 345 1.0E-30 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PhaeoP54_01228 1532c13f9cb240b39e63ca23bbf03a33 349 PRINTS PR00604 Class IA and IB cytochrome C signature 337 345 5.1E-15 T 14-10-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PhaeoP54_01228 1532c13f9cb240b39e63ca23bbf03a33 349 PRINTS PR00604 Class IA and IB cytochrome C signature 268 283 5.1E-15 T 14-10-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PhaeoP54_01228 1532c13f9cb240b39e63ca23bbf03a33 349 PRINTS PR00604 Class IA and IB cytochrome C signature 320 330 5.1E-15 T 14-10-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PhaeoP54_01228 1532c13f9cb240b39e63ca23bbf03a33 349 PRINTS PR00604 Class IA and IB cytochrome C signature 255 262 5.1E-15 T 14-10-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PhaeoP54_01228 1532c13f9cb240b39e63ca23bbf03a33 349 PRINTS PR00604 Class IA and IB cytochrome C signature 301 317 5.1E-15 T 14-10-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PhaeoP54_01228 1532c13f9cb240b39e63ca23bbf03a33 349 PRINTS PR00604 Class IA and IB cytochrome C signature 284 294 5.1E-15 T 14-10-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PhaeoP54_01228 1532c13f9cb240b39e63ca23bbf03a33 349 SUPERFAMILY SSF46626 37 171 2.26E-20 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PhaeoP54_01228 1532c13f9cb240b39e63ca23bbf03a33 349 Gene3D G3DSA:1.10.760.10 205 346 3.9E-39 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PhaeoP54_01228 1532c13f9cb240b39e63ca23bbf03a33 349 Gene3D G3DSA:1.10.760.10 33 169 1.3E-55 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PhaeoP54_02676 20003d76761956de21e8a85428805e48 235 Gene3D G3DSA:3.30.930.10 11 191 2.3E-47 T 14-10-2018 PhaeoP54_02676 20003d76761956de21e8a85428805e48 235 Pfam PF14563 Domain of unknown function (DUF4444) 193 234 4.1E-24 T 14-10-2018 IPR028044 Domain of unknown function DUF4444 PhaeoP54_02676 20003d76761956de21e8a85428805e48 235 Pfam PF16917 Biotin/lipoate A/B protein ligase family 6 187 4.6E-81 T 14-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 PhaeoP54_02676 20003d76761956de21e8a85428805e48 235 Gene3D G3DSA:2.30.30.100 192 234 3.7E-21 T 14-10-2018 PhaeoP54_02676 20003d76761956de21e8a85428805e48 235 SUPERFAMILY SSF55681 46 188 8.7E-7 T 14-10-2018 PhaeoP54_00661 62511f42bca32f4c7c48ca3694ac1af9 481 SUPERFAMILY SSF50800 73 168 1.08E-24 T 14-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily PhaeoP54_00661 62511f42bca32f4c7c48ca3694ac1af9 481 SUPERFAMILY SSF52935 320 470 1.44E-37 T 14-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 PhaeoP54_00661 62511f42bca32f4c7c48ca3694ac1af9 481 SUPERFAMILY SSF51621 3 338 1.43E-93 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 PhaeoP54_00661 62511f42bca32f4c7c48ca3694ac1af9 481 Gene3D G3DSA:2.40.33.10 73 169 3.9E-163 T 14-10-2018 IPR015806 Pyruvate kinase, insert domain superfamily GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 PhaeoP54_00661 62511f42bca32f4c7c48ca3694ac1af9 481 PRINTS PR01050 Pyruvate kinase family signature 291 309 4.4E-67 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 PhaeoP54_00661 62511f42bca32f4c7c48ca3694ac1af9 481 PRINTS PR01050 Pyruvate kinase family signature 310 326 4.4E-67 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 PhaeoP54_00661 62511f42bca32f4c7c48ca3694ac1af9 481 PRINTS PR01050 Pyruvate kinase family signature 62 78 4.4E-67 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 PhaeoP54_00661 62511f42bca32f4c7c48ca3694ac1af9 481 PRINTS PR01050 Pyruvate kinase family signature 266 290 4.4E-67 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 PhaeoP54_00661 62511f42bca32f4c7c48ca3694ac1af9 481 PRINTS PR01050 Pyruvate kinase family signature 241 265 4.4E-67 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 PhaeoP54_00661 62511f42bca32f4c7c48ca3694ac1af9 481 PRINTS PR01050 Pyruvate kinase family signature 187 201 4.4E-67 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 PhaeoP54_00661 62511f42bca32f4c7c48ca3694ac1af9 481 PRINTS PR01050 Pyruvate kinase family signature 214 240 4.4E-67 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 PhaeoP54_00661 62511f42bca32f4c7c48ca3694ac1af9 481 Pfam PF02887 Pyruvate kinase, alpha/beta domain 355 467 8.6E-30 T 14-10-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 PhaeoP54_00661 62511f42bca32f4c7c48ca3694ac1af9 481 Gene3D G3DSA:3.40.1380.20 333 466 3.9E-163 T 14-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 PhaeoP54_00661 62511f42bca32f4c7c48ca3694ac1af9 481 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 5 468 7.9E-151 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 PhaeoP54_00661 62511f42bca32f4c7c48ca3694ac1af9 481 Gene3D G3DSA:3.20.20.60 5 332 3.9E-163 T 14-10-2018 PhaeoP54_00661 62511f42bca32f4c7c48ca3694ac1af9 481 Pfam PF00224 Pyruvate kinase, barrel domain 5 334 4.4E-114 T 14-10-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 PhaeoP54_00389 bf3b19ad194504a7779665efb76c6666 272 SMART SM00382 26 230 2.0E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_00389 bf3b19ad194504a7779665efb76c6666 272 Gene3D G3DSA:3.40.50.300 1 269 1.3E-63 T 14-10-2018 PhaeoP54_00389 bf3b19ad194504a7779665efb76c6666 272 SUPERFAMILY SSF52540 2 234 3.13E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_00389 bf3b19ad194504a7779665efb76c6666 272 Pfam PF00005 ABC transporter 19 173 1.3E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PhaeoP54_00389 bf3b19ad194504a7779665efb76c6666 272 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PhaeoP54_00389 bf3b19ad194504a7779665efb76c6666 272 TIGRFAM TIGR02315 ABC_phnC: phosphonate ABC transporter, ATP-binding protein 1 242 6.8E-96 T 14-10-2018 IPR012693 ABC transporter, phosphonate import, PhnC GO:0005524|GO:0015416|GO:0015716|GO:0016020 PhaeoP54_01882 4f7daae5d37a03962e18609ff8546f28 367 Pfam PF03739 Predicted permease YjgP/YjgQ family 6 361 9.2E-53 T 14-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 PhaeoP54_01882 4f7daae5d37a03962e18609ff8546f28 367 TIGRFAM TIGR04408 LptG_lptG: LPS export ABC transporter permease LptG 2 363 8.8E-92 T 14-10-2018 IPR030923 LPS export ABC transporter permease LptG GO:0043190|GO:0055085 PhaeoP54_03629 af39978c051e342c2621f091c8439273 352 Gene3D G3DSA:2.70.98.10 16 345 1.4E-92 T 14-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 PhaeoP54_03629 af39978c051e342c2621f091c8439273 352 Pfam PF01263 Aldose 1-epimerase 31 340 2.0E-59 T 14-10-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 PhaeoP54_03629 af39978c051e342c2621f091c8439273 352 SUPERFAMILY SSF74650 25 343 1.07E-83 T 14-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 PhaeoP54_00266 ca0d5d5d0542c0f8918fea28645ccea9 320 Gene3D G3DSA:1.10.357.140 46 194 2.2E-43 T 14-10-2018 PhaeoP54_00266 ca0d5d5d0542c0f8918fea28645ccea9 320 Hamap MF_01635 4-hydroxybenzoate octaprenyltransferase [ubiA]. 24 319 24.954 T 14-10-2018 IPR006370 4-hydroxybenzoate polyprenyltransferase-like GO:0004659|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 PhaeoP54_00266 ca0d5d5d0542c0f8918fea28645ccea9 320 Gene3D G3DSA:1.20.120.1780 195 320 1.0E-8 T 14-10-2018 PhaeoP54_00266 ca0d5d5d0542c0f8918fea28645ccea9 320 Pfam PF01040 UbiA prenyltransferase family 47 296 4.5E-52 T 14-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 PhaeoP54_00266 ca0d5d5d0542c0f8918fea28645ccea9 320 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 91 113 - T 14-10-2018 IPR030470 UbiA prenyltransferase conserved site PhaeoP54_00266 ca0d5d5d0542c0f8918fea28645ccea9 320 TIGRFAM TIGR01474 ubiA_proteo: 4-hydroxybenzoate polyprenyl transferase 30 312 1.8E-95 T 14-10-2018 IPR006370 4-hydroxybenzoate polyprenyltransferase-like GO:0004659|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 PhaeoP54_01890 8ace4fcc1ffae80e3d492e55bb319f94 351 Gene3D G3DSA:3.30.160.20 205 290 8.1E-96 T 14-10-2018 PhaeoP54_01890 8ace4fcc1ffae80e3d492e55bb319f94 351 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 6 349 4.0E-146 T 14-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 PhaeoP54_01890 8ace4fcc1ffae80e3d492e55bb319f94 351 Pfam PF00472 RF-1 domain 206 314 4.3E-37 T 14-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 PhaeoP54_01890 8ace4fcc1ffae80e3d492e55bb319f94 351 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 222 238 - T 14-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 PhaeoP54_01890 8ace4fcc1ffae80e3d492e55bb319f94 351 SMART SM00937 58 173 1.2E-59 T 14-10-2018 IPR005139 Peptide chain release factor GO:0006415 PhaeoP54_01890 8ace4fcc1ffae80e3d492e55bb319f94 351 Gene3D G3DSA:3.30.70.1660 107 335 8.1E-96 T 14-10-2018 PhaeoP54_01890 8ace4fcc1ffae80e3d492e55bb319f94 351 SUPERFAMILY SSF75620 29 345 1.96E-127 T 14-10-2018 PhaeoP54_01890 8ace4fcc1ffae80e3d492e55bb319f94 351 Pfam PF03462 PCRF domain 12 198 5.4E-67 T 14-10-2018 IPR005139 Peptide chain release factor GO:0006415 PhaeoP54_01890 8ace4fcc1ffae80e3d492e55bb319f94 351 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 3 350 38.355 T 14-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 PhaeoP54_00305 bddf18bb12b2e529be05d3a3a2095cc5 278 Gene3D G3DSA:3.30.230.10 1 152 6.3E-46 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PhaeoP54_00305 bddf18bb12b2e529be05d3a3a2095cc5 278 SUPERFAMILY SSF54211 2 148 1.52E-32 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold PhaeoP54_00305 bddf18bb12b2e529be05d3a3a2095cc5 278 Gene3D G3DSA:3.30.70.890 155 276 1.2E-26 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily PhaeoP54_00305 bddf18bb12b2e529be05d3a3a2095cc5 278 Pfam PF08544 GHMP kinases C terminal 205 265 5.5E-8 T 14-10-2018 IPR013750 GHMP kinase, C-terminal domain PhaeoP54_00305 bddf18bb12b2e529be05d3a3a2095cc5 278 SUPERFAMILY SSF55060 155 273 4.8E-26 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily PhaeoP54_00305 bddf18bb12b2e529be05d3a3a2095cc5 278 Pfam PF00288 GHMP kinases N terminal domain 84 118 5.4E-7 T 14-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 PhaeoP54_00305 bddf18bb12b2e529be05d3a3a2095cc5 278 Hamap MF_00061 Putative 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 3 276 29.456 T 14-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 PhaeoP54_00305 bddf18bb12b2e529be05d3a3a2095cc5 278 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 3 265 7.7E-47 T 14-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 PhaeoP54_00305 bddf18bb12b2e529be05d3a3a2095cc5 278 PIRSF PIRSF010376 1 278 4.2E-76 T 14-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 PhaeoP54_01099 dc4fac5b3a539afa42519e404a6aec67 100 TIGRFAM TIGR00987 himA: integration host factor, alpha subunit 5 98 2.6E-49 T 14-10-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 PhaeoP54_01099 dc4fac5b3a539afa42519e404a6aec67 100 PRINTS PR01727 Prokaryotic integration host factor signature 45 60 6.5E-14 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 PhaeoP54_01099 dc4fac5b3a539afa42519e404a6aec67 100 PRINTS PR01727 Prokaryotic integration host factor signature 63 76 6.5E-14 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 PhaeoP54_01099 dc4fac5b3a539afa42519e404a6aec67 100 PRINTS PR01727 Prokaryotic integration host factor signature 79 93 6.5E-14 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 PhaeoP54_01099 dc4fac5b3a539afa42519e404a6aec67 100 Hamap MF_00380 Integration host factor subunit alpha [ihfA]. 4 100 28.547 T 14-10-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 PhaeoP54_01099 dc4fac5b3a539afa42519e404a6aec67 100 SMART SM00411 6 95 5.6E-37 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 PhaeoP54_01099 dc4fac5b3a539afa42519e404a6aec67 100 Gene3D G3DSA:4.10.520.10 4 100 1.7E-30 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 PhaeoP54_01099 dc4fac5b3a539afa42519e404a6aec67 100 SUPERFAMILY SSF47729 6 96 7.21E-28 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 PhaeoP54_01099 dc4fac5b3a539afa42519e404a6aec67 100 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 51 70 - T 14-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 PhaeoP54_01099 dc4fac5b3a539afa42519e404a6aec67 100 Pfam PF00216 Bacterial DNA-binding protein 6 94 3.4E-27 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 PhaeoP54_01429 2daa87bb3294ba82aac8942bb957e9aa 173 SUPERFAMILY SSF56276 52 158 6.28E-34 T 14-10-2018 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|Reactome: R-HSA-351202 PhaeoP54_01429 2daa87bb3294ba82aac8942bb957e9aa 173 TIGRFAM TIGR03330 SAM_DCase_Bsu: S-adenosylmethionine decarboxylase proenzyme 51 158 1.3E-39 T 14-10-2018 IPR017716 S-adenosylmethionine decarboxylase proenzyme GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 PhaeoP54_01429 2daa87bb3294ba82aac8942bb957e9aa 173 Pfam PF02675 S-adenosylmethionine decarboxylase 55 158 2.8E-34 T 14-10-2018 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 PhaeoP54_01429 2daa87bb3294ba82aac8942bb957e9aa 173 Hamap MF_00464 S-adenosylmethionine decarboxylase proenzyme [speH]. 49 162 24.375 T 14-10-2018 IPR017716 S-adenosylmethionine decarboxylase proenzyme GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 PhaeoP54_01429 2daa87bb3294ba82aac8942bb957e9aa 173 Gene3D G3DSA:3.60.90.10 38 171 2.2E-37 T 14-10-2018 PhaeoP54_03311 a37ffd72674ce1a0285813f8887e0f0a 101 Hamap MF_01954 Urease subunit beta [ureB]. 1 101 30.703 T 14-10-2018 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 PhaeoP54_03311 a37ffd72674ce1a0285813f8887e0f0a 101 Gene3D G3DSA:2.10.150.10 1 101 1.5E-44 T 14-10-2018 IPR036461 Urease, beta subunit superfamily KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 PhaeoP54_03311 a37ffd72674ce1a0285813f8887e0f0a 101 SUPERFAMILY SSF51278 1 101 4.45E-45 T 14-10-2018 IPR036461 Urease, beta subunit superfamily KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 PhaeoP54_03311 a37ffd72674ce1a0285813f8887e0f0a 101 TIGRFAM TIGR00192 urease_beta: urease, beta subunit 1 99 3.0E-40 T 14-10-2018 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 PhaeoP54_03311 a37ffd72674ce1a0285813f8887e0f0a 101 Pfam PF00699 Urease beta subunit 3 99 1.7E-42 T 14-10-2018 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 PhaeoP54_01120 cb21776554faa5cd258137bcd64ad64a 424 Pfam PF00113 Enolase, C-terminal TIM barrel domain 141 423 5.9E-130 T 14-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 PhaeoP54_01120 cb21776554faa5cd258137bcd64ad64a 424 ProSitePatterns PS00164 Enolase signature. 334 347 - T 14-10-2018 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: R-HSA-70171|Reactome: R-HSA-70263 PhaeoP54_01120 cb21776554faa5cd258137bcd64ad64a 424 PRINTS PR00148 Enolase signature 107 123 1.6E-46 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 PhaeoP54_01120 cb21776554faa5cd258137bcd64ad64a 424 PRINTS PR00148 Enolase signature 334 348 1.6E-46 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 PhaeoP54_01120 cb21776554faa5cd258137bcd64ad64a 424 PRINTS PR00148 Enolase signature 161 174 1.6E-46 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 PhaeoP54_01120 cb21776554faa5cd258137bcd64ad64a 424 PRINTS PR00148 Enolase signature 363 380 1.6E-46 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 PhaeoP54_01120 cb21776554faa5cd258137bcd64ad64a 424 PRINTS PR00148 Enolase signature 311 322 1.6E-46 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 PhaeoP54_01120 cb21776554faa5cd258137bcd64ad64a 424 PRINTS PR00148 Enolase signature 37 51 1.6E-46 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 PhaeoP54_01120 cb21776554faa5cd258137bcd64ad64a 424 Gene3D G3DSA:3.30.390.10 1 126 1.6E-56 T 14-10-2018 IPR029017 Enolase-like, N-terminal PhaeoP54_01120 cb21776554faa5cd258137bcd64ad64a 424 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 422 1.2E-206 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 PhaeoP54_01120 cb21776554faa5cd258137bcd64ad64a 424 SMART SM01193 4 134 2.0E-96 T 14-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 PhaeoP54_01120 cb21776554faa5cd258137bcd64ad64a 424 SUPERFAMILY SSF51604 139 422 6.93E-125 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily PhaeoP54_01120 cb21776554faa5cd258137bcd64ad64a 424 Hamap MF_00318 Enolase [eno]. 2 411 43.973 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 PhaeoP54_01120 cb21776554faa5cd258137bcd64ad64a 424 Gene3D G3DSA:3.20.20.120 129 424 4.8E-127 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily PhaeoP54_01120 cb21776554faa5cd258137bcd64ad64a 424 SUPERFAMILY SSF54826 3 137 2.3E-57 T 14-10-2018 PhaeoP54_01120 cb21776554faa5cd258137bcd64ad64a 424 Pfam PF03952 Enolase, N-terminal domain 4 134 4.3E-60 T 14-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 PhaeoP54_01120 cb21776554faa5cd258137bcd64ad64a 424 SMART SM01192 139 424 3.8E-213 T 14-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 PhaeoP54_01120 cb21776554faa5cd258137bcd64ad64a 424 PIRSF PIRSF001400 1 424 2.5E-186 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 PhaeoP54_00653 f96d39fec972122de14a5de9015472b0 321 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PhaeoP54_00653 f96d39fec972122de14a5de9015472b0 321 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 235 319 1.8E-25 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 PhaeoP54_00653 f96d39fec972122de14a5de9015472b0 321 SUPERFAMILY SSF52540 47 311 5.11E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_00653 f96d39fec972122de14a5de9015472b0 321 SMART SM00382 45 234 6.1E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_00653 f96d39fec972122de14a5de9015472b0 321 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 236 300 5.2E-18 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 PhaeoP54_00653 f96d39fec972122de14a5de9015472b0 321 Pfam PF00005 ABC transporter 37 185 2.8E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PhaeoP54_00653 f96d39fec972122de14a5de9015472b0 321 Gene3D G3DSA:3.40.50.300 16 321 4.6E-90 T 14-10-2018 PhaeoP54_00202 dbd571faf9a9a5e714005c4ff1fccf69 377 SUPERFAMILY SSF51735 7 356 3.52E-87 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PhaeoP54_00202 dbd571faf9a9a5e714005c4ff1fccf69 377 Gene3D G3DSA:3.40.50.720 9 341 4.7E-165 T 14-10-2018 PhaeoP54_00202 dbd571faf9a9a5e714005c4ff1fccf69 377 TIGRFAM TIGR01472 gmd: GDP-mannose 4,6-dehydratase 7 357 4.4E-178 T 14-10-2018 IPR006368 GDP-mannose 4,6-dehydratase GO:0008446|GO:0019673 KEGG: 00051+4.2.1.47|KEGG: 00520+4.2.1.47|MetaCyc: PWY-5738|MetaCyc: PWY-5739|MetaCyc: PWY-5740|MetaCyc: PWY-66|MetaCyc: PWY-7573|Reactome: R-HSA-6787639 PhaeoP54_00202 dbd571faf9a9a5e714005c4ff1fccf69 377 Hamap MF_00955 GDP-mannose 4,6-dehydratase [gmd]. 7 360 55.967 T 14-10-2018 IPR006368 GDP-mannose 4,6-dehydratase GO:0008446|GO:0019673 KEGG: 00051+4.2.1.47|KEGG: 00520+4.2.1.47|MetaCyc: PWY-5738|MetaCyc: PWY-5739|MetaCyc: PWY-5740|MetaCyc: PWY-66|MetaCyc: PWY-7573|Reactome: R-HSA-6787639 PhaeoP54_00202 dbd571faf9a9a5e714005c4ff1fccf69 377 Pfam PF16363 GDP-mannose 4,6 dehydratase 10 350 2.3E-159 T 14-10-2018 IPR016040 NAD(P)-binding domain PhaeoP54_00202 dbd571faf9a9a5e714005c4ff1fccf69 377 Gene3D G3DSA:3.90.25.10 197 355 4.7E-165 T 14-10-2018 PhaeoP54_00002 dc1107ae8cebbca99cb4c85957c0c285 373 SUPERFAMILY SSF55979 127 251 1.12E-26 T 14-10-2018 PhaeoP54_00002 dc1107ae8cebbca99cb4c85957c0c285 373 SUPERFAMILY SSF55979 1 118 1.09E-23 T 14-10-2018 PhaeoP54_00002 dc1107ae8cebbca99cb4c85957c0c285 373 Pfam PF02767 DNA polymerase III beta subunit, central domain 133 250 8.2E-30 T 14-10-2018 IPR022637 DNA polymerase III, beta sliding clamp, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 PhaeoP54_00002 dc1107ae8cebbca99cb4c85957c0c285 373 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 372 2.4E-93 T 14-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 PhaeoP54_00002 dc1107ae8cebbca99cb4c85957c0c285 373 SMART SM00480 17 369 3.3E-126 T 14-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 PhaeoP54_00002 dc1107ae8cebbca99cb4c85957c0c285 373 Gene3D G3DSA:3.70.10.10 139 371 2.8E-118 T 14-10-2018 PhaeoP54_00002 dc1107ae8cebbca99cb4c85957c0c285 373 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 120 2.3E-31 T 14-10-2018 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 PhaeoP54_00002 dc1107ae8cebbca99cb4c85957c0c285 373 Gene3D G3DSA:3.10.150.10 1 249 2.8E-118 T 14-10-2018 PhaeoP54_00002 dc1107ae8cebbca99cb4c85957c0c285 373 PIRSF PIRSF000804 1 373 7.9E-121 T 14-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 PhaeoP54_00002 dc1107ae8cebbca99cb4c85957c0c285 373 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 253 372 1.4E-32 T 14-10-2018 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 PhaeoP54_00002 dc1107ae8cebbca99cb4c85957c0c285 373 SUPERFAMILY SSF55979 253 373 6.09E-35 T 14-10-2018 PhaeoP54_03707 0afd7f640cf2d650d5ad2c33a056494c 415 Gene3D G3DSA:3.40.190.10 18 414 9.7E-78 T 14-10-2018 PhaeoP54_03707 0afd7f640cf2d650d5ad2c33a056494c 415 SUPERFAMILY SSF53850 23 407 3.61E-68 T 14-10-2018 PhaeoP54_03707 0afd7f640cf2d650d5ad2c33a056494c 415 Pfam PF13416 Bacterial extracellular solute-binding protein 42 353 9.5E-33 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein PhaeoP54_03160 04a031aa671c73b3f8d4f4bc48cd7e14 451 PIRSF PIRSF000167 2 451 5.3E-156 T 14-10-2018 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.98.3|MetaCyc: PWY-5531 PhaeoP54_03160 04a031aa671c73b3f8d4f4bc48cd7e14 451 Pfam PF04055 Radical SAM superfamily 55 226 1.5E-17 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 PhaeoP54_03160 04a031aa671c73b3f8d4f4bc48cd7e14 451 Gene3D G3DSA:1.10.10.920 365 450 1.7E-11 T 14-10-2018 PhaeoP54_03160 04a031aa671c73b3f8d4f4bc48cd7e14 451 Gene3D G3DSA:3.80.30.20 4 362 1.0E-99 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe PhaeoP54_03160 04a031aa671c73b3f8d4f4bc48cd7e14 451 TIGRFAM TIGR00538 hemN: oxygen-independent coproporphyrinogen III oxidase 13 443 2.6E-122 T 14-10-2018 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.98.3|MetaCyc: PWY-5531 PhaeoP54_03160 04a031aa671c73b3f8d4f4bc48cd7e14 451 SMART SM00729 50 271 1.1E-47 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 PhaeoP54_03160 04a031aa671c73b3f8d4f4bc48cd7e14 451 SUPERFAMILY SSF102114 5 439 1.83E-112 T 14-10-2018 PhaeoP54_02577 db8c04782971f369d7819071e1d1d8d5 342 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 16 25 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 PhaeoP54_02577 db8c04782971f369d7819071e1d1d8d5 342 SUPERFAMILY SSF52374 8 336 6.83E-91 T 14-10-2018 PhaeoP54_02577 db8c04782971f369d7819071e1d1d8d5 342 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 7 337 37.774 T 14-10-2018 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2|Reactome: R-HSA-379726 PhaeoP54_02577 db8c04782971f369d7819071e1d1d8d5 342 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 8 336 1.2E-94 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 PhaeoP54_02577 db8c04782971f369d7819071e1d1d8d5 342 Gene3D G3DSA:3.40.50.620 10 335 2.6E-125 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PhaeoP54_02577 db8c04782971f369d7819071e1d1d8d5 342 Gene3D G3DSA:1.10.240.10 192 304 2.6E-125 T 14-10-2018 PhaeoP54_02577 db8c04782971f369d7819071e1d1d8d5 342 Pfam PF00579 tRNA synthetases class I (W and Y) 8 283 8.9E-75 T 14-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 PhaeoP54_02577 db8c04782971f369d7819071e1d1d8d5 342 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 71 90 2.6E-24 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 PhaeoP54_02577 db8c04782971f369d7819071e1d1d8d5 342 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 20 36 2.6E-24 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 PhaeoP54_02577 db8c04782971f369d7819071e1d1d8d5 342 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 201 211 2.6E-24 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 PhaeoP54_02577 db8c04782971f369d7819071e1d1d8d5 342 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 147 168 2.6E-24 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 PhaeoP54_00050 4ceb519df4afe51c03e17902a012258a 329 Pfam PF13403 Hint domain 119 265 4.6E-48 T 14-10-2018 IPR028992 Hedgehog/Intein (Hint) domain PhaeoP54_00050 4ceb519df4afe51c03e17902a012258a 329 SUPERFAMILY SSF51294 119 215 4.32E-14 T 14-10-2018 IPR036844 Hint domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 PhaeoP54_00154 9dd93bf088d06fbe615405a92ad8dc4a 292 SUPERFAMILY SSF56317 1 267 2.49E-50 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily PhaeoP54_00154 9dd93bf088d06fbe615405a92ad8dc4a 292 Pfam PF00795 Carbon-nitrogen hydrolase 2 211 1.1E-18 T 14-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 PhaeoP54_00154 9dd93bf088d06fbe615405a92ad8dc4a 292 Gene3D G3DSA:3.60.110.10 1 279 7.8E-42 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily PhaeoP54_01627 60122c65ce4799fc43dc4f1138708bde 222 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 63 199 3.1E-13 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 PhaeoP54_01627 60122c65ce4799fc43dc4f1138708bde 222 Gene3D G3DSA:1.10.340.30 56 160 1.2E-54 T 14-10-2018 PhaeoP54_01627 60122c65ce4799fc43dc4f1138708bde 222 SMART SM00478 66 213 1.9E-15 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 PhaeoP54_01627 60122c65ce4799fc43dc4f1138708bde 222 SUPERFAMILY SSF48150 47 212 3.49E-41 T 14-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 PhaeoP54_01627 60122c65ce4799fc43dc4f1138708bde 222 Gene3D G3DSA:1.10.1670.40 32 209 1.2E-54 T 14-10-2018 PhaeoP54_03148 8d04b24ed3ec9497456d783d9695c6e6 542 TIGRFAM TIGR04178 exo_archaeo: exosortase/archaeosortase family protein 230 324 4.3E-17 T 14-10-2018 IPR026392 Exosortase/Archaeosortase domain PhaeoP54_03148 8d04b24ed3ec9497456d783d9695c6e6 542 TIGRFAM TIGR03008 pepcterm_CAAX: CAAX prenyl protease-related protein 353 542 1.0E-30 T 14-10-2018 IPR014346 Prenyl protease-related PhaeoP54_03148 8d04b24ed3ec9497456d783d9695c6e6 542 TIGRFAM TIGR04162 exo_VPEID: exosortase E/protease, VPEID-CTERM system 27 542 1.4E-246 T 14-10-2018 IPR026420 Exosortase E/protease, VPEID-CTERM system PhaeoP54_03148 8d04b24ed3ec9497456d783d9695c6e6 542 Pfam PF02517 CAAX protease self-immunity 445 527 8.1E-17 T 14-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 PhaeoP54_03148 8d04b24ed3ec9497456d783d9695c6e6 542 Pfam PF09721 Transmembrane exosortase (Exosortase_EpsH) 74 324 4.5E-14 T 14-10-2018 IPR019127 Exosortase PhaeoP54_03007 f9d3db16799356433ebacef17232ab01 454 ProSitePatterns PS00755 Protein secY signature 1. 80 99 - T 14-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 PhaeoP54_03007 f9d3db16799356433ebacef17232ab01 454 Hamap MF_01465 Protein translocase subunit SecY [secY]. 14 434 28.809 T 14-10-2018 IPR026593 Protein translocase subunit SecY PhaeoP54_03007 f9d3db16799356433ebacef17232ab01 454 SUPERFAMILY SSF103491 13 425 7.45E-128 T 14-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 PhaeoP54_03007 f9d3db16799356433ebacef17232ab01 454 Pfam PF00344 SecY translocase 81 418 4.4E-113 T 14-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 PhaeoP54_03007 f9d3db16799356433ebacef17232ab01 454 ProSitePatterns PS00756 Protein secY signature 2. 173 190 - T 14-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 PhaeoP54_03007 f9d3db16799356433ebacef17232ab01 454 PIRSF PIRSF004557 4 442 5.2E-123 T 14-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 PhaeoP54_03007 f9d3db16799356433ebacef17232ab01 454 Gene3D G3DSA:1.10.3370.10 12 430 1.7E-157 T 14-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 PhaeoP54_03007 f9d3db16799356433ebacef17232ab01 454 PRINTS PR00303 Preprotein translocase SecY subunit signature 79 99 3.0E-94 T 14-10-2018 PhaeoP54_03007 f9d3db16799356433ebacef17232ab01 454 PRINTS PR00303 Preprotein translocase SecY subunit signature 371 389 3.0E-94 T 14-10-2018 PhaeoP54_03007 f9d3db16799356433ebacef17232ab01 454 PRINTS PR00303 Preprotein translocase SecY subunit signature 403 421 3.0E-94 T 14-10-2018 PhaeoP54_03007 f9d3db16799356433ebacef17232ab01 454 PRINTS PR00303 Preprotein translocase SecY subunit signature 154 179 3.0E-94 T 14-10-2018 PhaeoP54_03007 f9d3db16799356433ebacef17232ab01 454 PRINTS PR00303 Preprotein translocase SecY subunit signature 27 45 3.0E-94 T 14-10-2018 PhaeoP54_03007 f9d3db16799356433ebacef17232ab01 454 PRINTS PR00303 Preprotein translocase SecY subunit signature 180 203 3.0E-94 T 14-10-2018 PhaeoP54_03007 f9d3db16799356433ebacef17232ab01 454 PRINTS PR00303 Preprotein translocase SecY subunit signature 315 337 3.0E-94 T 14-10-2018 PhaeoP54_03007 f9d3db16799356433ebacef17232ab01 454 PRINTS PR00303 Preprotein translocase SecY subunit signature 120 143 3.0E-94 T 14-10-2018 PhaeoP54_03007 f9d3db16799356433ebacef17232ab01 454 PRINTS PR00303 Preprotein translocase SecY subunit signature 272 291 3.0E-94 T 14-10-2018 PhaeoP54_03007 f9d3db16799356433ebacef17232ab01 454 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 24 429 2.4E-126 T 14-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 PhaeoP54_01186 50a3a3188724a7e49f0549c96d69ba47 383 Gene3D G3DSA:1.10.540.10 2 123 9.6E-33 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 PhaeoP54_01186 50a3a3188724a7e49f0549c96d69ba47 383 Gene3D G3DSA:1.20.140.10 240 383 3.3E-46 T 14-10-2018 PhaeoP54_01186 50a3a3188724a7e49f0549c96d69ba47 383 SUPERFAMILY SSF56645 7 247 4.32E-77 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 PhaeoP54_01186 50a3a3188724a7e49f0549c96d69ba47 383 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 126 222 3.0E-25 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 PhaeoP54_01186 50a3a3188724a7e49f0549c96d69ba47 383 Gene3D G3DSA:2.40.110.10 125 239 3.2E-39 T 14-10-2018 PhaeoP54_01186 50a3a3188724a7e49f0549c96d69ba47 383 SUPERFAMILY SSF47203 234 383 1.27E-48 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 PhaeoP54_01186 50a3a3188724a7e49f0549c96d69ba47 383 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 11 122 1.5E-30 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 PhaeoP54_01186 50a3a3188724a7e49f0549c96d69ba47 383 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 235 383 6.2E-43 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PhaeoP54_03397 547b21268d3719fc59081b146169d235 132 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 PhaeoP54_03397 547b21268d3719fc59081b146169d235 132 Pfam PF14815 NUDIX domain 8 121 5.2E-22 T 14-10-2018 IPR029119 MutY, C-terminal Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 PhaeoP54_03397 547b21268d3719fc59081b146169d235 132 SUPERFAMILY SSF55811 2 129 1.76E-40 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 PhaeoP54_03397 547b21268d3719fc59081b146169d235 132 PRINTS PR00502 NUDIX hydrolase family signature 33 47 1.7E-9 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 PhaeoP54_03397 547b21268d3719fc59081b146169d235 132 PRINTS PR00502 NUDIX hydrolase family signature 47 62 1.7E-9 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 PhaeoP54_03397 547b21268d3719fc59081b146169d235 132 Gene3D G3DSA:3.90.79.10 1 132 2.0E-41 T 14-10-2018 PhaeoP54_03397 547b21268d3719fc59081b146169d235 132 TIGRFAM TIGR00586 mutt: mutator mutT protein 2 129 3.7E-29 T 14-10-2018 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 PhaeoP54_02618 19897a0799f8aef1080d9d3c64b324f6 500 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 13 489 6.7E-63 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit PhaeoP54_01028 7436c9fce083824b545f5d82b1cb4011 555 ProSitePatterns PS01292 Uncharacterized protein family UPF0036 signature. 366 394 - T 14-10-2018 IPR001587 Ribonuclease J, conserved site PhaeoP54_01028 7436c9fce083824b545f5d82b1cb4011 555 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 366 410 8.3E-8 T 14-10-2018 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain PhaeoP54_01028 7436c9fce083824b545f5d82b1cb4011 555 Gene3D G3DSA:3.60.15.10 9 434 2.0E-139 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like PhaeoP54_01028 7436c9fce083824b545f5d82b1cb4011 555 SUPERFAMILY SSF56281 10 423 5.84E-76 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like PhaeoP54_01028 7436c9fce083824b545f5d82b1cb4011 555 SMART SM00849 18 218 1.8E-15 T 14-10-2018 IPR001279 Metallo-beta-lactamase PhaeoP54_01028 7436c9fce083824b545f5d82b1cb4011 555 Gene3D G3DSA:3.40.50.10710 210 367 2.0E-139 T 14-10-2018 PhaeoP54_01028 7436c9fce083824b545f5d82b1cb4011 555 Pfam PF00753 Metallo-beta-lactamase superfamily 20 169 1.8E-13 T 14-10-2018 IPR001279 Metallo-beta-lactamase PhaeoP54_01028 7436c9fce083824b545f5d82b1cb4011 555 Gene3D G3DSA:3.10.20.580 450 554 5.1E-6 T 14-10-2018 PhaeoP54_02612 f7ee538765cbb0f20a86c28f0fc71688 165 ProSitePatterns PS00818 Dps protein family signature 1. 46 62 - T 14-10-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 PhaeoP54_02612 f7ee538765cbb0f20a86c28f0fc71688 165 PIRSF PIRSF005900 7 165 3.1E-41 T 14-10-2018 IPR002177 DNA-binding protein Dps PhaeoP54_02612 f7ee538765cbb0f20a86c28f0fc71688 165 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 141 159 1.9E-10 T 14-10-2018 IPR002177 DNA-binding protein Dps PhaeoP54_02612 f7ee538765cbb0f20a86c28f0fc71688 165 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 46 62 1.9E-10 T 14-10-2018 IPR002177 DNA-binding protein Dps PhaeoP54_02612 f7ee538765cbb0f20a86c28f0fc71688 165 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 70 86 1.9E-10 T 14-10-2018 IPR002177 DNA-binding protein Dps PhaeoP54_02612 f7ee538765cbb0f20a86c28f0fc71688 165 SUPERFAMILY SSF47240 20 162 5.24E-37 T 14-10-2018 IPR009078 Ferritin-like superfamily PhaeoP54_02612 f7ee538765cbb0f20a86c28f0fc71688 165 Pfam PF00210 Ferritin-like domain 30 163 2.1E-25 T 14-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 PhaeoP54_02612 f7ee538765cbb0f20a86c28f0fc71688 165 Gene3D G3DSA:1.20.1260.10 11 164 1.5E-47 T 14-10-2018 IPR012347 Ferritin-like PhaeoP54_02645 1c15b91f06333b9ab57f72357e7845ec 320 Gene3D G3DSA:2.60.120.10 53 158 1.2E-12 T 14-10-2018 IPR014710 RmlC-like jelly roll fold PhaeoP54_02645 1c15b91f06333b9ab57f72357e7845ec 320 Pfam PF02311 AraC-like ligand binding domain 250 298 1.8E-6 T 14-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 PhaeoP54_02645 1c15b91f06333b9ab57f72357e7845ec 320 Gene3D G3DSA:2.60.120.10 236 306 6.4E-8 T 14-10-2018 IPR014710 RmlC-like jelly roll fold PhaeoP54_02645 1c15b91f06333b9ab57f72357e7845ec 320 SUPERFAMILY SSF51182 17 312 2.42E-33 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily PhaeoP54_02645 1c15b91f06333b9ab57f72357e7845ec 320 Pfam PF07883 Cupin domain 67 127 1.1E-6 T 14-10-2018 IPR013096 Cupin 2, conserved barrel PhaeoP54_01657 3a40379dd5e49d9c2820c2b2b387c90f 248 SMART SM00895 108 230 5.7E-12 T 14-10-2018 IPR011711 GntR, C-terminal PhaeoP54_01657 3a40379dd5e49d9c2820c2b2b387c90f 248 SUPERFAMILY SSF46785 17 86 2.85E-11 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_01657 3a40379dd5e49d9c2820c2b2b387c90f 248 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 44 58 9.0E-5 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PhaeoP54_01657 3a40379dd5e49d9c2820c2b2b387c90f 248 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 58 74 9.0E-5 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PhaeoP54_01657 3a40379dd5e49d9c2820c2b2b387c90f 248 SUPERFAMILY SSF48008 105 237 1.96E-21 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal PhaeoP54_01657 3a40379dd5e49d9c2820c2b2b387c90f 248 Gene3D G3DSA:1.10.10.10 20 91 1.5E-13 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_01657 3a40379dd5e49d9c2820c2b2b387c90f 248 Pfam PF07729 FCD domain 111 229 1.4E-17 T 14-10-2018 IPR011711 GntR, C-terminal PhaeoP54_01657 3a40379dd5e49d9c2820c2b2b387c90f 248 Gene3D G3DSA:1.20.120.530 96 245 6.9E-19 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal PhaeoP54_01657 3a40379dd5e49d9c2820c2b2b387c90f 248 SMART SM00345 25 84 6.2E-8 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PhaeoP54_01657 3a40379dd5e49d9c2820c2b2b387c90f 248 Pfam PF00392 Bacterial regulatory proteins, gntR family 23 83 1.5E-10 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PhaeoP54_03646 752e49cf0c17467bad87231ebe7770a9 481 SUPERFAMILY SSF52141 283 463 1.99E-53 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 PhaeoP54_03646 752e49cf0c17467bad87231ebe7770a9 481 Pfam PF03167 Uracil DNA glycosylase superfamily 306 461 2.6E-37 T 14-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 PhaeoP54_03646 752e49cf0c17467bad87231ebe7770a9 481 TIGRFAM TIGR00758 UDG_fam4: uracil-DNA glycosylase, family 4 292 462 2.7E-39 T 14-10-2018 IPR005273 Uracil-DNA glycosylase family 4 PhaeoP54_03646 752e49cf0c17467bad87231ebe7770a9 481 SMART SM00986 306 462 3.6E-35 T 14-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 PhaeoP54_03646 752e49cf0c17467bad87231ebe7770a9 481 TIGRFAM TIGR03914 UDG_fam_dom: uracil-DNA glycosylase family domain 237 467 1.9E-99 T 14-10-2018 IPR005273 Uracil-DNA glycosylase family 4 PhaeoP54_03646 752e49cf0c17467bad87231ebe7770a9 481 TIGRFAM TIGR03915 SAM_7_link_chp: probable DNA metabolism protein 10 235 4.6E-61 T 14-10-2018 IPR023875 DNA metabolism protein, putative PhaeoP54_03646 752e49cf0c17467bad87231ebe7770a9 481 Pfam PF13566 Domain of unknown function (DUF4130 76 234 1.1E-39 T 14-10-2018 IPR025404 Domain of unknown function DUF4130 PhaeoP54_03646 752e49cf0c17467bad87231ebe7770a9 481 Gene3D G3DSA:3.40.470.10 274 468 2.2E-58 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 PhaeoP54_03646 752e49cf0c17467bad87231ebe7770a9 481 SMART SM00987 306 462 3.6E-35 T 14-10-2018 PhaeoP54_03225 942641b22b4f4a37fe74756d6e50fcb9 421 Pfam PF01029 NusB family 6 124 1.4E-15 T 14-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 PhaeoP54_03225 942641b22b4f4a37fe74756d6e50fcb9 421 Gene3D G3DSA:1.10.940.10 1 136 1.6E-19 T 14-10-2018 IPR035926 NusB-like superfamily PhaeoP54_03225 942641b22b4f4a37fe74756d6e50fcb9 421 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 205 219 1.3E-25 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase PhaeoP54_03225 942641b22b4f4a37fe74756d6e50fcb9 421 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 401 418 1.3E-25 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase PhaeoP54_03225 942641b22b4f4a37fe74756d6e50fcb9 421 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 234 244 1.3E-25 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase PhaeoP54_03225 942641b22b4f4a37fe74756d6e50fcb9 421 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 293 305 1.3E-25 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase PhaeoP54_03225 942641b22b4f4a37fe74756d6e50fcb9 421 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 343 359 1.3E-25 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase PhaeoP54_03225 942641b22b4f4a37fe74756d6e50fcb9 421 SUPERFAMILY SSF48013 6 143 4.09E-20 T 14-10-2018 IPR035926 NusB-like superfamily PhaeoP54_03225 942641b22b4f4a37fe74756d6e50fcb9 421 Pfam PF01189 16S rRNA methyltransferase RsmB/F 223 417 1.1E-43 T 14-10-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 PhaeoP54_03225 942641b22b4f4a37fe74756d6e50fcb9 421 SUPERFAMILY SSF53335 139 418 1.82E-61 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PhaeoP54_03225 942641b22b4f4a37fe74756d6e50fcb9 421 Gene3D G3DSA:3.40.50.150 214 419 1.5E-55 T 14-10-2018 PhaeoP54_02307 f15f812ba4b60654dc6f60e318b949f1 323 Pfam PF00892 EamA-like transporter family 170 298 3.4E-14 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 PhaeoP54_02307 f15f812ba4b60654dc6f60e318b949f1 323 Pfam PF00892 EamA-like transporter family 25 159 4.7E-14 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 PhaeoP54_02307 f15f812ba4b60654dc6f60e318b949f1 323 SUPERFAMILY SSF103481 64 162 2.48E-14 T 14-10-2018 PhaeoP54_02307 f15f812ba4b60654dc6f60e318b949f1 323 SUPERFAMILY SSF103481 204 302 1.44E-16 T 14-10-2018 PhaeoP54_01693 72742b92aecfe1429db539fc66466b05 304 Gene3D G3DSA:3.40.190.290 94 290 6.4E-45 T 14-10-2018 PhaeoP54_01693 72742b92aecfe1429db539fc66466b05 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 6.6E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PhaeoP54_01693 72742b92aecfe1429db539fc66466b05 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 6.6E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PhaeoP54_01693 72742b92aecfe1429db539fc66466b05 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 6.6E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PhaeoP54_01693 72742b92aecfe1429db539fc66466b05 304 Gene3D G3DSA:1.10.10.10 4 91 1.8E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_01693 72742b92aecfe1429db539fc66466b05 304 Pfam PF03466 LysR substrate binding domain 91 289 6.9E-33 T 14-10-2018 IPR005119 LysR, substrate-binding PhaeoP54_01693 72742b92aecfe1429db539fc66466b05 304 SUPERFAMILY SSF46785 4 113 9.67E-25 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_01693 72742b92aecfe1429db539fc66466b05 304 SUPERFAMILY SSF53850 94 291 2.71E-38 T 14-10-2018 PhaeoP54_01693 72742b92aecfe1429db539fc66466b05 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 65 3.2E-21 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PhaeoP54_02822 ad9bae36774c7155d5d6cf7412604343 184 SUPERFAMILY SSF53335 1 181 9.79E-44 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PhaeoP54_02822 ad9bae36774c7155d5d6cf7412604343 184 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 2 183 1.2E-45 T 14-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 PhaeoP54_02822 ad9bae36774c7155d5d6cf7412604343 184 Gene3D G3DSA:3.40.50.150 1 184 1.6E-55 T 14-10-2018 PhaeoP54_02822 ad9bae36774c7155d5d6cf7412604343 184 Pfam PF03602 Conserved hypothetical protein 95 1 180 2.3E-49 T 14-10-2018 PhaeoP54_02822 ad9bae36774c7155d5d6cf7412604343 184 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 120 126 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 PhaeoP54_02822 ad9bae36774c7155d5d6cf7412604343 184 PIRSF PIRSF004553 1 184 2.3E-50 T 14-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 PhaeoP54_00480 dba6d3e63c97dacffb636d7d5b319f5c 220 Gene3D G3DSA:1.20.120.530 80 218 1.7E-32 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal PhaeoP54_00480 dba6d3e63c97dacffb636d7d5b319f5c 220 SMART SM00345 18 76 2.2E-15 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PhaeoP54_00480 dba6d3e63c97dacffb636d7d5b319f5c 220 Gene3D G3DSA:1.10.10.10 10 77 1.4E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_00480 dba6d3e63c97dacffb636d7d5b319f5c 220 Pfam PF07729 FCD domain 86 206 1.1E-22 T 14-10-2018 IPR011711 GntR, C-terminal PhaeoP54_00480 dba6d3e63c97dacffb636d7d5b319f5c 220 SMART SM00895 86 207 5.3E-20 T 14-10-2018 IPR011711 GntR, C-terminal PhaeoP54_00480 dba6d3e63c97dacffb636d7d5b319f5c 220 SUPERFAMILY SSF48008 82 215 1.78E-26 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal PhaeoP54_00480 dba6d3e63c97dacffb636d7d5b319f5c 220 Pfam PF00392 Bacterial regulatory proteins, gntR family 18 76 3.4E-16 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PhaeoP54_00480 dba6d3e63c97dacffb636d7d5b319f5c 220 SUPERFAMILY SSF46785 9 102 7.87E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_03471 9910d39e9e9ed173f2b481bdcef26ff6 232 SUPERFAMILY SSF53448 8 227 5.86E-42 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PhaeoP54_03471 9910d39e9e9ed173f2b481bdcef26ff6 232 Gene3D G3DSA:3.90.550.10 7 231 3.4E-39 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PhaeoP54_03471 9910d39e9e9ed173f2b481bdcef26ff6 232 Pfam PF12804 MobA-like NTP transferase domain 8 135 3.4E-14 T 14-10-2018 IPR025877 MobA-like NTP transferase PhaeoP54_00368 d0e2dd09ef46c6b752a3770dc3f14b9e 331 SUPERFAMILY SSF53822 35 262 7.36E-19 T 14-10-2018 IPR028082 Periplasmic binding protein-like I PhaeoP54_00368 d0e2dd09ef46c6b752a3770dc3f14b9e 331 Gene3D G3DSA:3.40.50.2300 125 315 4.7E-92 T 14-10-2018 PhaeoP54_00368 d0e2dd09ef46c6b752a3770dc3f14b9e 331 Gene3D G3DSA:3.40.50.2300 26 279 4.7E-92 T 14-10-2018 PhaeoP54_00368 d0e2dd09ef46c6b752a3770dc3f14b9e 331 Pfam PF02608 ABC transporter substrate-binding protein PnrA-like 29 317 8.2E-60 T 14-10-2018 IPR003760 ABC transporter substrate-binding protein PnrA-like GO:0005886 PhaeoP54_01493 3dd277557a30a8b36a92d3d041c66c42 281 Pfam PF10670 Domain of unknown function (DUF4198) 23 245 5.2E-28 T 14-10-2018 IPR019613 Protein of unknown function DUF4198 PhaeoP54_03306 bad095750257c71bcd266dbd11247395 672 Pfam PF02653 Branched-chain amino acid transport system / permease component 384 652 2.0E-51 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 PhaeoP54_03306 bad095750257c71bcd266dbd11247395 672 TIGRFAM TIGR03409 urea_trans_UrtB: urea ABC transporter, permease protein UrtB 382 668 3.0E-112 T 14-10-2018 IPR017779 ABC transporter, urea permease protein UrtB, bacterial-type PhaeoP54_02665 29a07e848da091821e84a208111b65eb 440 SMART SM00320 272 312 3.3 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 PhaeoP54_02665 29a07e848da091821e84a208111b65eb 440 SMART SM00320 111 147 0.035 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 PhaeoP54_02665 29a07e848da091821e84a208111b65eb 440 SMART SM00320 230 269 6.7 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 PhaeoP54_02665 29a07e848da091821e84a208111b65eb 440 SMART SM00320 152 186 120.0 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 PhaeoP54_02665 29a07e848da091821e84a208111b65eb 440 SMART SM00320 69 106 1.7 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 PhaeoP54_02665 29a07e848da091821e84a208111b65eb 440 SMART SM00320 188 227 24.0 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 PhaeoP54_02665 29a07e848da091821e84a208111b65eb 440 SMART SM00320 30 68 1.1E-5 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 PhaeoP54_02665 29a07e848da091821e84a208111b65eb 440 Pfam PF00034 Cytochrome c 338 434 1.6E-6 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PhaeoP54_02665 29a07e848da091821e84a208111b65eb 440 SUPERFAMILY SSF46626 336 434 1.29E-22 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PhaeoP54_02665 29a07e848da091821e84a208111b65eb 440 Gene3D G3DSA:2.130.10.10 195 316 5.0E-16 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 PhaeoP54_02665 29a07e848da091821e84a208111b65eb 440 SUPERFAMILY SSF50978 30 312 4.27E-44 T 14-10-2018 IPR036322 WD40-repeat-containing domain superfamily GO:0005515 PhaeoP54_02665 29a07e848da091821e84a208111b65eb 440 Gene3D G3DSA:1.10.760.10 317 435 2.7E-27 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PhaeoP54_02665 29a07e848da091821e84a208111b65eb 440 Gene3D G3DSA:2.130.10.10 26 194 5.4E-28 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 PhaeoP54_02665 29a07e848da091821e84a208111b65eb 440 Pfam PF00400 WD domain, G-beta repeat 118 146 0.026 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 PhaeoP54_02665 29a07e848da091821e84a208111b65eb 440 Pfam PF00400 WD domain, G-beta repeat 34 67 0.0016 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 PhaeoP54_02665 29a07e848da091821e84a208111b65eb 440 PRINTS PR00604 Class IA and IB cytochrome C signature 359 374 2.2E-10 T 14-10-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PhaeoP54_02665 29a07e848da091821e84a208111b65eb 440 PRINTS PR00604 Class IA and IB cytochrome C signature 346 353 2.2E-10 T 14-10-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PhaeoP54_02665 29a07e848da091821e84a208111b65eb 440 PRINTS PR00604 Class IA and IB cytochrome C signature 375 385 2.2E-10 T 14-10-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PhaeoP54_02665 29a07e848da091821e84a208111b65eb 440 PRINTS PR00604 Class IA and IB cytochrome C signature 409 419 2.2E-10 T 14-10-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PhaeoP54_02665 29a07e848da091821e84a208111b65eb 440 PRINTS PR00604 Class IA and IB cytochrome C signature 426 434 2.2E-10 T 14-10-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PhaeoP54_02911 ce52eeef39f2765d91b3235f343c8529 361 SUPERFAMILY SSF161098 124 338 2.09E-14 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_02911 ce52eeef39f2765d91b3235f343c8529 361 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 147 354 2.0E-35 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PhaeoP54_02911 ce52eeef39f2765d91b3235f343c8529 361 Gene3D G3DSA:1.10.3720.10 117 348 5.4E-19 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_01079 8e5ec8c08ab4df1b8adfbcd222c9d4b5 148 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 110 134 - T 14-10-2018 IPR020458 Zinc finger, DksA/TraR C4-type conserved site PhaeoP54_01079 8e5ec8c08ab4df1b8adfbcd222c9d4b5 148 SUPERFAMILY SSF57716 107 145 3.71E-8 T 14-10-2018 PhaeoP54_01079 8e5ec8c08ab4df1b8adfbcd222c9d4b5 148 Hamap MF_00926 RNA polymerase-binding transcription factor DksA [dksA]. 24 146 28.184 T 14-10-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 PhaeoP54_01079 8e5ec8c08ab4df1b8adfbcd222c9d4b5 148 SUPERFAMILY SSF109635 12 106 3.79E-33 T 14-10-2018 IPR037187 DksA, N-terminal domain superfamily PhaeoP54_01079 8e5ec8c08ab4df1b8adfbcd222c9d4b5 148 TIGRFAM TIGR02420 dksA: RNA polymerase-binding protein DksA 28 137 8.2E-45 T 14-10-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 PhaeoP54_01079 8e5ec8c08ab4df1b8adfbcd222c9d4b5 148 Gene3D G3DSA:1.20.120.910 16 148 2.4E-37 T 14-10-2018 PhaeoP54_01079 8e5ec8c08ab4df1b8adfbcd222c9d4b5 148 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 105 140 2.0E-10 T 14-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 PhaeoP54_02354 25b6fb2c60abf490c0d0e01339838180 275 Gene3D G3DSA:3.40.50.720 8 167 1.4E-41 T 14-10-2018 PhaeoP54_02354 25b6fb2c60abf490c0d0e01339838180 275 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 11 102 7.1E-11 T 14-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal PhaeoP54_02354 25b6fb2c60abf490c0d0e01339838180 275 SUPERFAMILY SSF51735 10 162 2.49E-30 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PhaeoP54_02354 25b6fb2c60abf490c0d0e01339838180 275 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 9 272 24.911 T 14-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 PhaeoP54_02354 25b6fb2c60abf490c0d0e01339838180 275 SUPERFAMILY SSF48179 166 273 1.87E-29 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 PhaeoP54_02354 25b6fb2c60abf490c0d0e01339838180 275 Gene3D G3DSA:1.10.3730.10 168 275 7.4E-37 T 14-10-2018 PhaeoP54_02354 25b6fb2c60abf490c0d0e01339838180 275 PIRSF PIRSF000193 8 275 3.6E-62 T 14-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 PhaeoP54_02354 25b6fb2c60abf490c0d0e01339838180 275 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 11 272 2.9E-74 T 14-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 PhaeoP54_02354 25b6fb2c60abf490c0d0e01339838180 275 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 166 272 6.3E-32 T 14-10-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 PhaeoP54_00573 edf44058bfa54aeb103911688bc858cd 136 Gene3D G3DSA:3.10.129.10 1 134 5.9E-31 T 14-10-2018 PhaeoP54_00573 edf44058bfa54aeb103911688bc858cd 136 Pfam PF03061 Thioesterase superfamily 45 119 8.3E-11 T 14-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 PhaeoP54_00573 edf44058bfa54aeb103911688bc858cd 136 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 14 132 4.9E-14 T 14-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 PhaeoP54_00573 edf44058bfa54aeb103911688bc858cd 136 SUPERFAMILY SSF54637 8 134 2.87E-27 T 14-10-2018 IPR029069 HotDog domain superfamily PhaeoP54_02634 348cbad1f7c0951697a54dddeeeb9e27 333 Pfam PF12680 SnoaL-like domain 11 132 1.8E-10 T 14-10-2018 IPR037401 SnoaL-like domain PhaeoP54_02634 348cbad1f7c0951697a54dddeeeb9e27 333 SUPERFAMILY SSF54427 6 152 1.05E-26 T 14-10-2018 IPR032710 NTF2-like domain superfamily PhaeoP54_02634 348cbad1f7c0951697a54dddeeeb9e27 333 Gene3D G3DSA:3.10.450.50 185 327 1.8E-19 T 14-10-2018 PhaeoP54_02634 348cbad1f7c0951697a54dddeeeb9e27 333 Gene3D G3DSA:3.10.450.50 5 155 3.5E-24 T 14-10-2018 PhaeoP54_02634 348cbad1f7c0951697a54dddeeeb9e27 333 SUPERFAMILY SSF54427 182 324 5.61E-19 T 14-10-2018 IPR032710 NTF2-like domain superfamily PhaeoP54_03975 210fa66eefcda255fecf77ccd629f6f6 323 SUPERFAMILY SSF51735 111 278 1.21E-48 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PhaeoP54_03975 210fa66eefcda255fecf77ccd629f6f6 323 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 27 85 3.4E-10 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 PhaeoP54_03975 210fa66eefcda255fecf77ccd629f6f6 323 Pfam PF00107 Zinc-binding dehydrogenase 150 256 2.8E-31 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 PhaeoP54_03975 210fa66eefcda255fecf77ccd629f6f6 323 SMART SM00829 10 321 1.2E-33 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 PhaeoP54_03975 210fa66eefcda255fecf77ccd629f6f6 323 SUPERFAMILY SSF50129 1 143 3.2E-39 T 14-10-2018 IPR011032 GroES-like superfamily PhaeoP54_03975 210fa66eefcda255fecf77ccd629f6f6 323 Gene3D G3DSA:3.90.180.10 11 317 3.1E-116 T 14-10-2018 PhaeoP54_03975 210fa66eefcda255fecf77ccd629f6f6 323 Gene3D G3DSA:3.40.50.720 122 267 3.1E-116 T 14-10-2018 PhaeoP54_02707 d693bf8d0e883ad8b6c3b9c647fca8dc 266 Pfam PF00005 ABC transporter 28 186 2.5E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PhaeoP54_02707 d693bf8d0e883ad8b6c3b9c647fca8dc 266 Gene3D G3DSA:3.40.50.300 12 251 1.9E-52 T 14-10-2018 PhaeoP54_02707 d693bf8d0e883ad8b6c3b9c647fca8dc 266 SUPERFAMILY SSF52540 10 243 2.17E-54 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_02707 d693bf8d0e883ad8b6c3b9c647fca8dc 266 SMART SM00382 37 234 5.5E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_01152 98ce1d0088ec151b7536f7e132b8389e 138 Gene3D G3DSA:2.170.150.70 17 138 1.3E-34 T 14-10-2018 PhaeoP54_01152 98ce1d0088ec151b7536f7e132b8389e 138 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 41 115 4.1E-10 T 14-10-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 PhaeoP54_01152 98ce1d0088ec151b7536f7e132b8389e 138 SUPERFAMILY SSF51316 15 132 1.26E-29 T 14-10-2018 IPR011057 Mss4-like superfamily PhaeoP54_01554 32166d6c0f9d5edbc0eba4fb4a7a5c74 403 Gene3D G3DSA:3.40.710.10 6 402 1.4E-112 T 14-10-2018 PhaeoP54_01554 32166d6c0f9d5edbc0eba4fb4a7a5c74 403 Pfam PF00144 Beta-lactamase 14 397 6.1E-57 T 14-10-2018 IPR001466 Beta-lactamase-related PhaeoP54_01554 32166d6c0f9d5edbc0eba4fb4a7a5c74 403 SUPERFAMILY SSF56601 3 388 7.44E-80 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like PhaeoP54_03713 8a26999419cdd137143656f8f4a472c7 278 SUPERFAMILY SSF51197 1 271 1.24E-87 T 14-10-2018 PhaeoP54_03713 8a26999419cdd137143656f8f4a472c7 278 Gene3D G3DSA:3.60.130.10 1 275 3.8E-86 T 14-10-2018 PhaeoP54_03713 8a26999419cdd137143656f8f4a472c7 278 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 3 266 3.2E-65 T 14-10-2018 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: R-HSA-71262 PhaeoP54_00395 6b7d1564a833c709b749418b6de800eb 158 Pfam PF06754 Phosphonate metabolism protein PhnG 17 156 1.4E-53 T 14-10-2018 IPR009609 Phosphonate metabolism PhnG GO:0015716|GO:0019634 KEGG: 00440+2.7.8.37|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 PhaeoP54_00395 6b7d1564a833c709b749418b6de800eb 158 TIGRFAM TIGR03293 PhnG_redo: phosphonate C-P lyase system protein PhnG 17 157 2.5E-51 T 14-10-2018 IPR009609 Phosphonate metabolism PhnG GO:0015716|GO:0019634 KEGG: 00440+2.7.8.37|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 PhaeoP54_00482 7648c63348d93b54c59413ad1f8dd0b5 314 PIRSF PIRSF029792 1 311 1.2E-77 T 14-10-2018 IPR008794 Proline racemase family PhaeoP54_00482 7648c63348d93b54c59413ad1f8dd0b5 314 Pfam PF05544 Proline racemase 3 309 1.3E-83 T 14-10-2018 IPR008794 Proline racemase family PhaeoP54_00482 7648c63348d93b54c59413ad1f8dd0b5 314 Gene3D G3DSA:3.10.310.10 2 305 2.0E-86 T 14-10-2018 PhaeoP54_00482 7648c63348d93b54c59413ad1f8dd0b5 314 SUPERFAMILY SSF54506 1 308 1.55E-80 T 14-10-2018 PhaeoP54_00482 7648c63348d93b54c59413ad1f8dd0b5 314 Gene3D G3DSA:3.10.310.10 131 286 2.0E-86 T 14-10-2018 PhaeoP54_00940 8c17ffbb4af874bdafe0aa4b2a97fd5c 311 Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase 2 274 4.9E-93 T 14-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 PhaeoP54_00940 8c17ffbb4af874bdafe0aa4b2a97fd5c 311 Gene3D G3DSA:3.30.230.20 1 126 4.7E-45 T 14-10-2018 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 PhaeoP54_00940 8c17ffbb4af874bdafe0aa4b2a97fd5c 311 TIGRFAM TIGR00325 lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 2 285 4.1E-77 T 14-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 PhaeoP54_00940 8c17ffbb4af874bdafe0aa4b2a97fd5c 311 SUPERFAMILY SSF54211 133 276 4.93E-40 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold PhaeoP54_00940 8c17ffbb4af874bdafe0aa4b2a97fd5c 311 Gene3D G3DSA:3.30.1700.10 129 297 4.0E-45 T 14-10-2018 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 PhaeoP54_00940 8c17ffbb4af874bdafe0aa4b2a97fd5c 311 SUPERFAMILY SSF54211 2 124 6.45E-38 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold PhaeoP54_00940 8c17ffbb4af874bdafe0aa4b2a97fd5c 311 Hamap MF_00388 UDP-3-O-acyl-N-acetylglucosamine deacetylase [lpxC]. 1 278 35.889 T 14-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 PhaeoP54_02772 db9bd747dcbeb66e73f8e7ce9ba976e9 489 Gene3D G3DSA:3.90.1150.10 300 467 9.6E-21 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 PhaeoP54_02772 db9bd747dcbeb66e73f8e7ce9ba976e9 489 Gene3D G3DSA:3.40.640.10 60 289 5.4E-43 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PhaeoP54_02772 db9bd747dcbeb66e73f8e7ce9ba976e9 489 Pfam PF00266 Aminotransferase class-V 48 414 4.7E-46 T 14-10-2018 IPR000192 Aminotransferase class V domain PhaeoP54_02772 db9bd747dcbeb66e73f8e7ce9ba976e9 489 SUPERFAMILY SSF53383 46 464 1.15E-73 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PhaeoP54_03287 6463be6a0d74e7ee4d0f20e9312b5fd9 398 Gene3D G3DSA:3.40.50.2000 186 371 8.6E-31 T 14-10-2018 PhaeoP54_03287 6463be6a0d74e7ee4d0f20e9312b5fd9 398 Gene3D G3DSA:3.40.50.11720 8 179 3.3E-6 T 14-10-2018 IPR038107 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal domain superfamily KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 PhaeoP54_03287 6463be6a0d74e7ee4d0f20e9312b5fd9 398 Pfam PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 21 179 7.3E-17 T 14-10-2018 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 PhaeoP54_01063 a0faaba19a17e03b0419aa024a57759a 506 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 31 495 6.5E-154 T 14-10-2018 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 PhaeoP54_01063 a0faaba19a17e03b0419aa024a57759a 506 Gene3D G3DSA:3.40.50.300 192 505 5.8E-101 T 14-10-2018 PhaeoP54_01063 a0faaba19a17e03b0419aa024a57759a 506 Pfam PF03796 DnaB-like helicase C terminal domain 209 493 1.5E-102 T 14-10-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 PhaeoP54_01063 a0faaba19a17e03b0419aa024a57759a 506 SUPERFAMILY SSF52540 207 485 5.02E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_01063 a0faaba19a17e03b0419aa024a57759a 506 SUPERFAMILY SSF48024 30 140 1.19E-30 T 14-10-2018 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily GO:0003678|GO:0005524|GO:0006260 PhaeoP54_01063 a0faaba19a17e03b0419aa024a57759a 506 Gene3D G3DSA:1.10.860.10 26 188 1.2E-37 T 14-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal PhaeoP54_01063 a0faaba19a17e03b0419aa024a57759a 506 Pfam PF00772 DnaB-like helicase N terminal domain 31 132 4.8E-25 T 14-10-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 PhaeoP54_02844 3f163afc5e117521aa2e4f461c0e3601 614 Pfam PF00920 Dehydratase family 34 606 6.0E-221 T 14-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 PhaeoP54_02844 3f163afc5e117521aa2e4f461c0e3601 614 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 4 609 44.92 T 14-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 PhaeoP54_02844 3f163afc5e117521aa2e4f461c0e3601 614 Gene3D G3DSA:3.50.30.80 422 574 2.6E-54 T 14-10-2018 PhaeoP54_02844 3f163afc5e117521aa2e4f461c0e3601 614 SUPERFAMILY SSF52016 422 609 4.63E-59 T 14-10-2018 PhaeoP54_02844 3f163afc5e117521aa2e4f461c0e3601 614 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 18 608 3.7E-253 T 14-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 PhaeoP54_02844 3f163afc5e117521aa2e4f461c0e3601 614 SUPERFAMILY SSF143975 4 421 5.23E-137 T 14-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 PhaeoP54_02844 3f163afc5e117521aa2e4f461c0e3601 614 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 122 132 - T 14-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 PhaeoP54_02844 3f163afc5e117521aa2e4f461c0e3601 614 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 510 521 - T 14-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 PhaeoP54_01747 96b22ef692241eaa60e1f80c015bc628 396 PIRSF PIRSF000724 1 396 2.3E-139 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 PhaeoP54_01747 96b22ef692241eaa60e1f80c015bc628 396 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 15 25 - T 14-10-2018 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 PhaeoP54_01747 96b22ef692241eaa60e1f80c015bc628 396 Gene3D G3DSA:3.40.50.1260 169 386 5.8E-145 T 14-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 PhaeoP54_01747 96b22ef692241eaa60e1f80c015bc628 396 Pfam PF00162 Phosphoglycerate kinase 7 386 7.1E-146 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 PhaeoP54_01747 96b22ef692241eaa60e1f80c015bc628 396 SUPERFAMILY SSF53748 5 395 3.53E-145 T 14-10-2018 IPR036043 Phosphoglycerate kinase superfamily GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 PhaeoP54_01747 96b22ef692241eaa60e1f80c015bc628 396 PRINTS PR00477 Phosphoglycerate kinase family signature 167 189 8.4E-77 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 PhaeoP54_01747 96b22ef692241eaa60e1f80c015bc628 396 PRINTS PR00477 Phosphoglycerate kinase family signature 190 209 8.4E-77 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 PhaeoP54_01747 96b22ef692241eaa60e1f80c015bc628 396 PRINTS PR00477 Phosphoglycerate kinase family signature 349 360 8.4E-77 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 PhaeoP54_01747 96b22ef692241eaa60e1f80c015bc628 396 PRINTS PR00477 Phosphoglycerate kinase family signature 312 337 8.4E-77 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 PhaeoP54_01747 96b22ef692241eaa60e1f80c015bc628 396 PRINTS PR00477 Phosphoglycerate kinase family signature 109 124 8.4E-77 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 PhaeoP54_01747 96b22ef692241eaa60e1f80c015bc628 396 PRINTS PR00477 Phosphoglycerate kinase family signature 31 53 8.4E-77 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 PhaeoP54_01747 96b22ef692241eaa60e1f80c015bc628 396 PRINTS PR00477 Phosphoglycerate kinase family signature 137 159 8.4E-77 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 PhaeoP54_01747 96b22ef692241eaa60e1f80c015bc628 396 PRINTS PR00477 Phosphoglycerate kinase family signature 10 26 8.4E-77 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 PhaeoP54_01747 96b22ef692241eaa60e1f80c015bc628 396 PRINTS PR00477 Phosphoglycerate kinase family signature 372 389 8.4E-77 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 PhaeoP54_01747 96b22ef692241eaa60e1f80c015bc628 396 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 5 396 38.415 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 PhaeoP54_01747 96b22ef692241eaa60e1f80c015bc628 396 Gene3D G3DSA:3.40.50.1260 8 394 5.8E-145 T 14-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 PhaeoP54_00551 cfe65a77545c01c04a66b0a4de7ef29a 354 Pfam PF04143 Sulphur transport 34 340 3.5E-50 T 14-10-2018 IPR007272 Sulphur transport domain PhaeoP54_01372 7e4a03f1a93b3ee9c2587527a9ef916a 401 Gene3D G3DSA:3.40.50.150 133 401 1.5E-100 T 14-10-2018 PhaeoP54_01372 7e4a03f1a93b3ee9c2587527a9ef916a 401 Pfam PF02353 Mycolic acid cyclopropane synthetase 127 396 1.6E-88 T 14-10-2018 PhaeoP54_01372 7e4a03f1a93b3ee9c2587527a9ef916a 401 PIRSF PIRSF003085 7 401 2.6E-134 T 14-10-2018 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 PhaeoP54_01372 7e4a03f1a93b3ee9c2587527a9ef916a 401 SUPERFAMILY SSF53335 135 398 7.74E-79 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PhaeoP54_02235 64c5e139deae82a76a03ee61c43fbfd4 287 Pfam PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 125 190 9.5E-7 T 14-10-2018 PhaeoP54_02235 64c5e139deae82a76a03ee61c43fbfd4 287 SUPERFAMILY SSF69318 108 215 1.01E-9 T 14-10-2018 PhaeoP54_03331 9fdefb87ec6fcdf38a0dfde54f4286f6 173 Gene3D G3DSA:3.40.50.300 3 159 3.6E-34 T 14-10-2018 PhaeoP54_03331 9fdefb87ec6fcdf38a0dfde54f4286f6 173 PIRSF PIRSF007531 1 172 4.8E-31 T 14-10-2018 IPR012853 Chloramphenicol phosphotransferase-like GO:0005524|GO:0016740 PhaeoP54_03331 9fdefb87ec6fcdf38a0dfde54f4286f6 173 Pfam PF07931 Chloramphenicol phosphotransferase-like protein 4 161 1.5E-33 T 14-10-2018 IPR012853 Chloramphenicol phosphotransferase-like GO:0005524|GO:0016740 PhaeoP54_03331 9fdefb87ec6fcdf38a0dfde54f4286f6 173 SUPERFAMILY SSF52540 3 154 8.74E-12 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_02392 d50a840239853edd1ae610ad2cb22a53 116 Gene3D G3DSA:2.60.40.2080 10 106 2.2E-22 T 14-10-2018 IPR037221 H-type lectin domain superfamily PhaeoP54_02392 d50a840239853edd1ae610ad2cb22a53 116 Pfam PF09458 H-type lectin domain 39 104 6.7E-20 T 14-10-2018 IPR019019 H-type lectin domain GO:0007155|GO:0030246 PhaeoP54_02392 d50a840239853edd1ae610ad2cb22a53 116 SUPERFAMILY SSF141086 8 105 4.84E-30 T 14-10-2018 IPR037221 H-type lectin domain superfamily PhaeoP54_02718 3c41bfac64a3dd812e953f537d0653d3 360 Pfam PF02653 Branched-chain amino acid transport system / permease component 64 342 4.3E-40 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 PhaeoP54_02560 0f41ea227a3813f90f9dacb49912bd06 270 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 39 264 1.6E-49 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PhaeoP54_02560 0f41ea227a3813f90f9dacb49912bd06 270 SMART SM00079 38 265 8.9E-5 T 14-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 PhaeoP54_02560 0f41ea227a3813f90f9dacb49912bd06 270 Gene3D G3DSA:3.40.190.10 42 263 7.8E-54 T 14-10-2018 PhaeoP54_02560 0f41ea227a3813f90f9dacb49912bd06 270 Gene3D G3DSA:3.40.190.10 124 226 7.8E-54 T 14-10-2018 PhaeoP54_02560 0f41ea227a3813f90f9dacb49912bd06 270 SUPERFAMILY SSF53850 14 264 2.7E-57 T 14-10-2018 PhaeoP54_02560 0f41ea227a3813f90f9dacb49912bd06 270 SMART SM00062 38 266 1.2E-45 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PhaeoP54_00460 83697649ba25b511c9c7c85490f436e6 417 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 17 403 4.4E-198 T 14-10-2018 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 PhaeoP54_00460 83697649ba25b511c9c7c85490f436e6 417 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 12 404 51.742 T 14-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 PhaeoP54_00460 83697649ba25b511c9c7c85490f436e6 417 PIRSF PIRSF001413 8 410 1.1E-158 T 14-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 PhaeoP54_00460 83697649ba25b511c9c7c85490f436e6 417 Gene3D G3DSA:3.40.50.1100 20 216 8.2E-184 T 14-10-2018 PhaeoP54_00460 83697649ba25b511c9c7c85490f436e6 417 SUPERFAMILY SSF53686 13 402 1.7E-144 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme PhaeoP54_00460 83697649ba25b511c9c7c85490f436e6 417 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 91 105 - T 14-10-2018 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 PhaeoP54_00460 83697649ba25b511c9c7c85490f436e6 417 Gene3D G3DSA:3.40.50.1100 64 397 8.2E-184 T 14-10-2018 PhaeoP54_00460 83697649ba25b511c9c7c85490f436e6 417 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 63 391 1.9E-43 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme PhaeoP54_01165 5bbc2348fb88ec3bcab7409a02594524 195 Gene3D G3DSA:1.10.357.10 1 195 1.6E-53 T 14-10-2018 PhaeoP54_01165 5bbc2348fb88ec3bcab7409a02594524 195 SUPERFAMILY SSF46689 6 78 8.21E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PhaeoP54_01165 5bbc2348fb88ec3bcab7409a02594524 195 Pfam PF13305 WHG domain 93 174 2.8E-13 T 14-10-2018 IPR025996 WHG domain PhaeoP54_01165 5bbc2348fb88ec3bcab7409a02594524 195 SUPERFAMILY SSF48498 86 189 6.23E-15 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily PhaeoP54_01143 e31631ed54cdadb2e3b7f0c0ff49abc9 383 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 49 67 - T 14-10-2018 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site PhaeoP54_01143 e31631ed54cdadb2e3b7f0c0ff49abc9 383 SUPERFAMILY SSF50621 222 372 4.19E-30 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 PhaeoP54_01143 e31631ed54cdadb2e3b7f0c0ff49abc9 383 SUPERFAMILY SSF51419 31 262 6.11E-46 T 14-10-2018 IPR029066 PLP-binding barrel PhaeoP54_01143 e31631ed54cdadb2e3b7f0c0ff49abc9 383 Gene3D G3DSA:2.40.37.10 259 365 4.7E-77 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 PhaeoP54_01143 e31631ed54cdadb2e3b7f0c0ff49abc9 383 PRINTS PR01182 Ornithine decarboxylase signature 340 353 1.9E-11 T 14-10-2018 IPR002433 Ornithine decarboxylase GO:0006596 PhaeoP54_01143 e31631ed54cdadb2e3b7f0c0ff49abc9 383 PRINTS PR01182 Ornithine decarboxylase signature 91 115 1.9E-11 T 14-10-2018 IPR002433 Ornithine decarboxylase GO:0006596 PhaeoP54_01143 e31631ed54cdadb2e3b7f0c0ff49abc9 383 PRINTS PR01182 Ornithine decarboxylase signature 319 329 1.9E-11 T 14-10-2018 IPR002433 Ornithine decarboxylase GO:0006596 PhaeoP54_01143 e31631ed54cdadb2e3b7f0c0ff49abc9 383 PRINTS PR01182 Ornithine decarboxylase signature 121 143 1.9E-11 T 14-10-2018 IPR002433 Ornithine decarboxylase GO:0006596 PhaeoP54_01143 e31631ed54cdadb2e3b7f0c0ff49abc9 383 PRINTS PR01182 Ornithine decarboxylase signature 47 74 1.9E-11 T 14-10-2018 IPR002433 Ornithine decarboxylase GO:0006596 PhaeoP54_01143 e31631ed54cdadb2e3b7f0c0ff49abc9 383 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 261 353 2.4E-9 T 14-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 PhaeoP54_01143 e31631ed54cdadb2e3b7f0c0ff49abc9 383 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 250 269 9.8E-20 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 PhaeoP54_01143 e31631ed54cdadb2e3b7f0c0ff49abc9 383 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 353 366 9.8E-20 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 PhaeoP54_01143 e31631ed54cdadb2e3b7f0c0ff49abc9 383 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 70 82 9.8E-20 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 PhaeoP54_01143 e31631ed54cdadb2e3b7f0c0ff49abc9 383 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 49 67 9.8E-20 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 PhaeoP54_01143 e31631ed54cdadb2e3b7f0c0ff49abc9 383 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 36 260 4.5E-33 T 14-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 PhaeoP54_01143 e31631ed54cdadb2e3b7f0c0ff49abc9 383 Gene3D G3DSA:3.20.20.10 47 258 4.7E-77 T 14-10-2018 IPR029066 PLP-binding barrel PhaeoP54_01573 44af2fabe7c589fa25d7ce4508a5ee55 334 Gene3D G3DSA:3.40.50.880 15 214 5.3E-54 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like PhaeoP54_01573 44af2fabe7c589fa25d7ce4508a5ee55 334 SUPERFAMILY SSF46689 225 276 7.17E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PhaeoP54_01573 44af2fabe7c589fa25d7ce4508a5ee55 334 SUPERFAMILY SSF46689 278 326 1.08E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PhaeoP54_01573 44af2fabe7c589fa25d7ce4508a5ee55 334 Gene3D G3DSA:1.10.10.60 222 331 1.4E-34 T 14-10-2018 PhaeoP54_01573 44af2fabe7c589fa25d7ce4508a5ee55 334 SMART SM00342 242 325 5.3E-29 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PhaeoP54_01573 44af2fabe7c589fa25d7ce4508a5ee55 334 SUPERFAMILY SSF52317 18 206 4.23E-43 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like PhaeoP54_01573 44af2fabe7c589fa25d7ce4508a5ee55 334 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 279 321 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 PhaeoP54_01573 44af2fabe7c589fa25d7ce4508a5ee55 334 Pfam PF01965 DJ-1/PfpI family 50 186 5.0E-14 T 14-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 PhaeoP54_01573 44af2fabe7c589fa25d7ce4508a5ee55 334 Pfam PF12833 Helix-turn-helix domain 248 323 4.7E-25 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PhaeoP54_01225 8928249272d96481a4c605823d875670 283 Gene3D G3DSA:1.10.760.10 50 282 5.5E-107 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PhaeoP54_01225 8928249272d96481a4c605823d875670 283 PIRSF PIRSF038455 1 283 3.8E-81 T 14-10-2018 IPR025710 SoxAX cytochrome complex subunit A GO:0009055|GO:0016491|GO:0019417|GO:0020037|GO:0070069 PhaeoP54_01225 8928249272d96481a4c605823d875670 283 SUPERFAMILY SSF46626 25 172 2.68E-42 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PhaeoP54_01225 8928249272d96481a4c605823d875670 283 SUPERFAMILY SSF46626 173 283 2.67E-35 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PhaeoP54_01225 8928249272d96481a4c605823d875670 283 TIGRFAM TIGR04484 thiosulf_SoxA: sulfur oxidation c-type cytochrome SoxA 75 283 5.0E-76 T 14-10-2018 IPR025710 SoxAX cytochrome complex subunit A GO:0009055|GO:0016491|GO:0019417|GO:0020037|GO:0070069 PhaeoP54_01225 8928249272d96481a4c605823d875670 283 Gene3D G3DSA:1.10.760.10 77 166 5.5E-107 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PhaeoP54_03300 e44f2ddb274d70bf80dc78529409c476 344 Gene3D G3DSA:3.30.70.250 130 209 5.7E-26 T 14-10-2018 PhaeoP54_03300 e44f2ddb274d70bf80dc78529409c476 344 SUPERFAMILY SSF52151 6 314 1.12E-31 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase PhaeoP54_03300 e44f2ddb274d70bf80dc78529409c476 344 Gene3D G3DSA:3.40.366.10 20 302 5.7E-26 T 14-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 PhaeoP54_03300 e44f2ddb274d70bf80dc78529409c476 344 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 44 319 7.4E-4 T 14-10-2018 IPR020801 Polyketide synthase, acyl transferase domain PhaeoP54_00667 05a86ee810b3bcb528515fa08a9a40df 798 SMART SM00896 704 797 8.4E-33 T 14-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 PhaeoP54_00667 05a86ee810b3bcb528515fa08a9a40df 798 Pfam PF01588 Putative tRNA binding domain 46 140 3.6E-20 T 14-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 PhaeoP54_00667 05a86ee810b3bcb528515fa08a9a40df 798 Gene3D G3DSA:3.30.56.10 5 185 7.0E-59 T 14-10-2018 PhaeoP54_00667 05a86ee810b3bcb528515fa08a9a40df 798 SUPERFAMILY SSF55681 486 689 7.95E-41 T 14-10-2018 PhaeoP54_00667 05a86ee810b3bcb528515fa08a9a40df 798 Gene3D G3DSA:3.30.930.10 489 688 9.5E-52 T 14-10-2018 PhaeoP54_00667 05a86ee810b3bcb528515fa08a9a40df 798 SMART SM00874 406 470 3.4E-20 T 14-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 PhaeoP54_00667 05a86ee810b3bcb528515fa08a9a40df 798 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 791 39.137 T 14-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 PhaeoP54_00667 05a86ee810b3bcb528515fa08a9a40df 798 Pfam PF03483 B3/4 domain 218 390 6.2E-64 T 14-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 PhaeoP54_00667 05a86ee810b3bcb528515fa08a9a40df 798 SUPERFAMILY SSF46955 407 473 2.2E-13 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily PhaeoP54_00667 05a86ee810b3bcb528515fa08a9a40df 798 SMART SM00873 218 390 6.2E-84 T 14-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 PhaeoP54_00667 05a86ee810b3bcb528515fa08a9a40df 798 Pfam PF03147 Ferredoxin-fold anticodon binding domain 704 797 4.9E-21 T 14-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 PhaeoP54_00667 05a86ee810b3bcb528515fa08a9a40df 798 Gene3D G3DSA:3.30.56.10 407 473 2.5E-15 T 14-10-2018 PhaeoP54_00667 05a86ee810b3bcb528515fa08a9a40df 798 SUPERFAMILY SSF56037 205 401 2.88E-72 T 14-10-2018 PhaeoP54_00667 05a86ee810b3bcb528515fa08a9a40df 798 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 797 2.3E-197 T 14-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 PhaeoP54_00667 05a86ee810b3bcb528515fa08a9a40df 798 Gene3D G3DSA:3.50.40.10 202 399 3.1E-68 T 14-10-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 KEGG: 00970+6.1.1.20 PhaeoP54_00667 05a86ee810b3bcb528515fa08a9a40df 798 Pfam PF03484 tRNA synthetase B5 domain 410 467 6.5E-14 T 14-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 PhaeoP54_00667 05a86ee810b3bcb528515fa08a9a40df 798 SUPERFAMILY SSF54991 704 797 4.05E-22 T 14-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 PhaeoP54_00667 05a86ee810b3bcb528515fa08a9a40df 798 Gene3D G3DSA:2.40.50.140 39 158 7.0E-59 T 14-10-2018 PhaeoP54_00667 05a86ee810b3bcb528515fa08a9a40df 798 SUPERFAMILY SSF50249 37 199 2.03E-38 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold PhaeoP54_00667 05a86ee810b3bcb528515fa08a9a40df 798 Gene3D G3DSA:3.30.70.380 706 798 3.5E-20 T 14-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 PhaeoP54_01531 1bdbf623e9bf93a6454685358277d600 406 Gene3D G3DSA:3.90.1150.10 7 398 1.3E-156 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 PhaeoP54_01531 1bdbf623e9bf93a6454685358277d600 406 Gene3D G3DSA:3.40.640.10 35 295 1.3E-156 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PhaeoP54_01531 1bdbf623e9bf93a6454685358277d600 406 SUPERFAMILY SSF53383 2 399 2.72E-118 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PhaeoP54_01531 1bdbf623e9bf93a6454685358277d600 406 TIGRFAM TIGR01979 sufS: cysteine desulfurase, SufS family 6 405 2.4E-159 T 14-10-2018 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 PhaeoP54_01531 1bdbf623e9bf93a6454685358277d600 406 Pfam PF00266 Aminotransferase class-V 25 394 8.9E-130 T 14-10-2018 IPR000192 Aminotransferase class V domain PhaeoP54_02545 0ce79fe9a487876142c2ef47140c9e3c 504 SUPERFAMILY SSF82185 199 327 4.64E-39 T 14-10-2018 PhaeoP54_02545 0ce79fe9a487876142c2ef47140c9e3c 504 Gene3D G3DSA:2.20.110.10 417 481 4.2E-12 T 14-10-2018 PhaeoP54_02545 0ce79fe9a487876142c2ef47140c9e3c 504 Gene3D G3DSA:2.20.110.10 324 416 1.2E-19 T 14-10-2018 PhaeoP54_02545 0ce79fe9a487876142c2ef47140c9e3c 504 Gene3D G3DSA:2.20.110.10 45 120 3.0E-16 T 14-10-2018 PhaeoP54_02545 0ce79fe9a487876142c2ef47140c9e3c 504 Gene3D G3DSA:2.20.110.10 253 323 1.4E-20 T 14-10-2018 PhaeoP54_02545 0ce79fe9a487876142c2ef47140c9e3c 504 Gene3D G3DSA:2.20.110.10 160 234 2.5E-18 T 14-10-2018 PhaeoP54_02545 0ce79fe9a487876142c2ef47140c9e3c 504 SMART SM00698 180 201 0.78 T 14-10-2018 IPR003409 MORN motif PhaeoP54_02545 0ce79fe9a487876142c2ef47140c9e3c 504 SMART SM00698 433 454 0.0082 T 14-10-2018 IPR003409 MORN motif PhaeoP54_02545 0ce79fe9a487876142c2ef47140c9e3c 504 SMART SM00698 387 408 0.45 T 14-10-2018 IPR003409 MORN motif PhaeoP54_02545 0ce79fe9a487876142c2ef47140c9e3c 504 SMART SM00698 42 63 6.2E-4 T 14-10-2018 IPR003409 MORN motif PhaeoP54_02545 0ce79fe9a487876142c2ef47140c9e3c 504 SMART SM00698 295 316 6.9E-4 T 14-10-2018 IPR003409 MORN motif PhaeoP54_02545 0ce79fe9a487876142c2ef47140c9e3c 504 SMART SM00698 203 224 0.0029 T 14-10-2018 IPR003409 MORN motif PhaeoP54_02545 0ce79fe9a487876142c2ef47140c9e3c 504 SMART SM00698 341 362 0.0024 T 14-10-2018 IPR003409 MORN motif PhaeoP54_02545 0ce79fe9a487876142c2ef47140c9e3c 504 SMART SM00698 65 86 0.92 T 14-10-2018 IPR003409 MORN motif PhaeoP54_02545 0ce79fe9a487876142c2ef47140c9e3c 504 SMART SM00698 157 178 6.7E-4 T 14-10-2018 IPR003409 MORN motif PhaeoP54_02545 0ce79fe9a487876142c2ef47140c9e3c 504 SMART SM00698 410 431 0.0028 T 14-10-2018 IPR003409 MORN motif PhaeoP54_02545 0ce79fe9a487876142c2ef47140c9e3c 504 SMART SM00698 249 270 8.1E-5 T 14-10-2018 IPR003409 MORN motif PhaeoP54_02545 0ce79fe9a487876142c2ef47140c9e3c 504 SMART SM00698 88 109 0.0016 T 14-10-2018 IPR003409 MORN motif PhaeoP54_02545 0ce79fe9a487876142c2ef47140c9e3c 504 SMART SM00698 111 132 0.0049 T 14-10-2018 IPR003409 MORN motif PhaeoP54_02545 0ce79fe9a487876142c2ef47140c9e3c 504 SMART SM00698 364 385 0.53 T 14-10-2018 IPR003409 MORN motif PhaeoP54_02545 0ce79fe9a487876142c2ef47140c9e3c 504 SMART SM00698 134 155 1.6 T 14-10-2018 IPR003409 MORN motif PhaeoP54_02545 0ce79fe9a487876142c2ef47140c9e3c 504 SMART SM00698 318 339 8.7E-4 T 14-10-2018 IPR003409 MORN motif PhaeoP54_02545 0ce79fe9a487876142c2ef47140c9e3c 504 SMART SM00698 226 247 1.4 T 14-10-2018 IPR003409 MORN motif PhaeoP54_02545 0ce79fe9a487876142c2ef47140c9e3c 504 SMART SM00698 272 293 0.0015 T 14-10-2018 IPR003409 MORN motif PhaeoP54_02545 0ce79fe9a487876142c2ef47140c9e3c 504 SUPERFAMILY SSF82185 291 419 7.98E-38 T 14-10-2018 PhaeoP54_02545 0ce79fe9a487876142c2ef47140c9e3c 504 SUPERFAMILY SSF82185 407 467 3.4E-17 T 14-10-2018 PhaeoP54_02545 0ce79fe9a487876142c2ef47140c9e3c 504 Pfam PF02493 MORN repeat 67 89 0.034 T 14-10-2018 IPR003409 MORN motif PhaeoP54_02545 0ce79fe9a487876142c2ef47140c9e3c 504 Pfam PF02493 MORN repeat 113 135 1.1E-5 T 14-10-2018 IPR003409 MORN motif PhaeoP54_02545 0ce79fe9a487876142c2ef47140c9e3c 504 Pfam PF02493 MORN repeat 320 341 1.0E-4 T 14-10-2018 IPR003409 MORN motif PhaeoP54_02545 0ce79fe9a487876142c2ef47140c9e3c 504 Pfam PF02493 MORN repeat 136 153 2.0 T 14-10-2018 IPR003409 MORN motif PhaeoP54_02545 0ce79fe9a487876142c2ef47140c9e3c 504 Pfam PF02493 MORN repeat 232 250 4.5 T 14-10-2018 IPR003409 MORN motif PhaeoP54_02545 0ce79fe9a487876142c2ef47140c9e3c 504 Pfam PF02493 MORN repeat 274 296 1.6E-5 T 14-10-2018 IPR003409 MORN motif PhaeoP54_02545 0ce79fe9a487876142c2ef47140c9e3c 504 Pfam PF02493 MORN repeat 251 271 1.3E-4 T 14-10-2018 IPR003409 MORN motif PhaeoP54_02545 0ce79fe9a487876142c2ef47140c9e3c 504 Pfam PF02493 MORN repeat 90 112 2.1E-5 T 14-10-2018 IPR003409 MORN motif PhaeoP54_02545 0ce79fe9a487876142c2ef47140c9e3c 504 Pfam PF02493 MORN repeat 366 388 5.3E-4 T 14-10-2018 IPR003409 MORN motif PhaeoP54_02545 0ce79fe9a487876142c2ef47140c9e3c 504 Pfam PF02493 MORN repeat 343 363 9.8E-5 T 14-10-2018 IPR003409 MORN motif PhaeoP54_02545 0ce79fe9a487876142c2ef47140c9e3c 504 Pfam PF02493 MORN repeat 435 456 8.6E-4 T 14-10-2018 IPR003409 MORN motif PhaeoP54_02545 0ce79fe9a487876142c2ef47140c9e3c 504 Pfam PF02493 MORN repeat 389 409 0.23 T 14-10-2018 IPR003409 MORN motif PhaeoP54_02545 0ce79fe9a487876142c2ef47140c9e3c 504 Pfam PF02493 MORN repeat 205 226 9.8E-5 T 14-10-2018 IPR003409 MORN motif PhaeoP54_02545 0ce79fe9a487876142c2ef47140c9e3c 504 Pfam PF02493 MORN repeat 44 64 1.4E-5 T 14-10-2018 IPR003409 MORN motif PhaeoP54_02545 0ce79fe9a487876142c2ef47140c9e3c 504 Pfam PF02493 MORN repeat 297 319 7.1E-6 T 14-10-2018 IPR003409 MORN motif PhaeoP54_02545 0ce79fe9a487876142c2ef47140c9e3c 504 Pfam PF02493 MORN repeat 182 202 0.012 T 14-10-2018 IPR003409 MORN motif PhaeoP54_02545 0ce79fe9a487876142c2ef47140c9e3c 504 Pfam PF02493 MORN repeat 412 434 4.7E-6 T 14-10-2018 IPR003409 MORN motif PhaeoP54_02545 0ce79fe9a487876142c2ef47140c9e3c 504 Pfam PF02493 MORN repeat 159 180 2.1E-6 T 14-10-2018 IPR003409 MORN motif PhaeoP54_02545 0ce79fe9a487876142c2ef47140c9e3c 504 SUPERFAMILY SSF82185 41 143 2.22E-28 T 14-10-2018 PhaeoP54_03230 9079218ede0764b653a2c6e60176c9a4 245 Pfam PF09992 Phosphodiester glycosidase 68 211 1.7E-15 T 14-10-2018 IPR018711 Phosphodiester glycosidase PhaeoP54_01473 f6f1c8bcd7417f589f853c64bcb737ea 829 Pfam PF01804 Penicillin amidase 49 810 1.2E-186 T 14-10-2018 IPR002692 Penicillin/GL-7-ACA/AHL/aculeacin-A acylase GO:0016787|GO:0017000 PhaeoP54_01473 f6f1c8bcd7417f589f853c64bcb737ea 829 Gene3D G3DSA:1.10.1400.10 566 708 8.0E-137 T 14-10-2018 PhaeoP54_01473 f6f1c8bcd7417f589f853c64bcb737ea 829 Gene3D G3DSA:3.60.20.10 267 800 8.0E-137 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal PhaeoP54_01473 f6f1c8bcd7417f589f853c64bcb737ea 829 SUPERFAMILY SSF56235 45 824 1.21E-215 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal PhaeoP54_01473 f6f1c8bcd7417f589f853c64bcb737ea 829 Gene3D G3DSA:2.30.120.10 339 414 8.0E-137 T 14-10-2018 PhaeoP54_01473 f6f1c8bcd7417f589f853c64bcb737ea 829 PIRSF PIRSF001227 7 825 6.7E-152 T 14-10-2018 IPR014395 Penicillin/GL-7-ACA/AHL acylase GO:0016811 PhaeoP54_01473 f6f1c8bcd7417f589f853c64bcb737ea 829 Gene3D G3DSA:1.10.439.10 24 190 1.0E-50 T 14-10-2018 IPR023343 Penicillin amidase type, domain 1 GO:0016811 PhaeoP54_00637 cbc0da82f5e4ed462c54fc49149736be 646 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 57 161 6.5E-15 T 14-10-2018 IPR007831 General secretory system II, protein E, N-terminal PhaeoP54_00637 cbc0da82f5e4ed462c54fc49149736be 646 Pfam PF13641 Glycosyltransferase like family 2 269 496 2.2E-34 T 14-10-2018 PhaeoP54_00637 cbc0da82f5e4ed462c54fc49149736be 646 SUPERFAMILY SSF160246 22 158 4.18E-19 T 14-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily PhaeoP54_00637 cbc0da82f5e4ed462c54fc49149736be 646 Gene3D G3DSA:3.90.550.10 260 478 6.0E-44 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PhaeoP54_00637 cbc0da82f5e4ed462c54fc49149736be 646 SUPERFAMILY SSF53448 271 529 1.13E-45 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PhaeoP54_01060 bc70970a894f5dfe64076434da1b2c16 248 Pfam PF00005 ABC transporter 17 164 8.6E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PhaeoP54_01060 bc70970a894f5dfe64076434da1b2c16 248 SMART SM00382 26 214 2.2E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_01060 bc70970a894f5dfe64076434da1b2c16 248 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PhaeoP54_01060 bc70970a894f5dfe64076434da1b2c16 248 SUPERFAMILY SSF52540 1 230 2.96E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_01060 bc70970a894f5dfe64076434da1b2c16 248 Gene3D G3DSA:3.40.50.300 1 245 3.2E-61 T 14-10-2018 PhaeoP54_03898 a0ab467993cbaf347820687234545f98 221 Gene3D G3DSA:2.40.440.10 28 215 2.6E-33 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like PhaeoP54_03898 a0ab467993cbaf347820687234545f98 221 Pfam PF03734 L,D-transpeptidase catalytic domain 76 206 1.0E-14 T 14-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 PhaeoP54_03898 a0ab467993cbaf347820687234545f98 221 SUPERFAMILY SSF141523 75 210 1.96E-23 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like PhaeoP54_01659 91345c143ffe9d7e88539f500e69d847 389 SUPERFAMILY SSF103473 9 387 2.35E-40 T 14-10-2018 IPR036259 MFS transporter superfamily PhaeoP54_01659 91345c143ffe9d7e88539f500e69d847 389 Gene3D G3DSA:1.20.1250.20 16 198 2.1E-16 T 14-10-2018 PhaeoP54_01659 91345c143ffe9d7e88539f500e69d847 389 Pfam PF07690 Major Facilitator Superfamily 25 328 2.5E-20 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PhaeoP54_01659 91345c143ffe9d7e88539f500e69d847 389 Gene3D G3DSA:1.20.1250.20 206 385 2.2E-16 T 14-10-2018 PhaeoP54_03815 b14bbef5c534d0b0433d5f129cf86024 240 Pfam PF08401 Domain of unknown function (DUF1738) 11 132 6.4E-31 T 14-10-2018 IPR013610 Domain of unknown function DUF1738 PhaeoP54_02635 f37165858aa180094455482ffea71712 349 Pfam PF00005 ABC transporter 20 161 1.1E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PhaeoP54_02635 f37165858aa180094455482ffea71712 349 Gene3D G3DSA:3.40.50.300 2 221 1.5E-62 T 14-10-2018 PhaeoP54_02635 f37165858aa180094455482ffea71712 349 Pfam PF08402 TOBE domain 270 339 1.4E-4 T 14-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 PhaeoP54_02635 f37165858aa180094455482ffea71712 349 Gene3D G3DSA:2.40.50.940 222 340 6.5E-24 T 14-10-2018 PhaeoP54_02635 f37165858aa180094455482ffea71712 349 SUPERFAMILY SSF52540 4 242 2.26E-84 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_02635 f37165858aa180094455482ffea71712 349 SUPERFAMILY SSF50331 236 347 1.77E-21 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal PhaeoP54_02635 f37165858aa180094455482ffea71712 349 Gene3D G3DSA:2.40.50.140 277 331 6.5E-24 T 14-10-2018 PhaeoP54_02635 f37165858aa180094455482ffea71712 349 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PhaeoP54_02635 f37165858aa180094455482ffea71712 349 SMART SM00382 28 211 5.2E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_03379 4d5af051aa472aab4c5eabd9f380d192 375 SUPERFAMILY SSF50331 250 372 4.68E-18 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal PhaeoP54_03379 4d5af051aa472aab4c5eabd9f380d192 375 SMART SM00382 42 225 9.7E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_03379 4d5af051aa472aab4c5eabd9f380d192 375 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PhaeoP54_03379 4d5af051aa472aab4c5eabd9f380d192 375 Gene3D G3DSA:2.40.50.100 296 368 6.7E-7 T 14-10-2018 PhaeoP54_03379 4d5af051aa472aab4c5eabd9f380d192 375 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 48 371 1.9E-120 T 14-10-2018 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 PhaeoP54_03379 4d5af051aa472aab4c5eabd9f380d192 375 Gene3D G3DSA:2.40.50.140 253 369 6.7E-7 T 14-10-2018 PhaeoP54_03379 4d5af051aa472aab4c5eabd9f380d192 375 Gene3D G3DSA:3.40.50.300 12 252 4.4E-75 T 14-10-2018 PhaeoP54_03379 4d5af051aa472aab4c5eabd9f380d192 375 Pfam PF08402 TOBE domain 293 373 1.3E-19 T 14-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 PhaeoP54_03379 4d5af051aa472aab4c5eabd9f380d192 375 SUPERFAMILY SSF52540 17 254 4.26E-84 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_03379 4d5af051aa472aab4c5eabd9f380d192 375 Pfam PF00005 ABC transporter 34 175 5.6E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PhaeoP54_02692 7e0c3ad6a6b1f65980f02a46df1a539d 252 SMART SM00345 24 83 6.3E-16 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PhaeoP54_02692 7e0c3ad6a6b1f65980f02a46df1a539d 252 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 43 57 1.3E-8 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PhaeoP54_02692 7e0c3ad6a6b1f65980f02a46df1a539d 252 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 57 73 1.3E-8 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PhaeoP54_02692 7e0c3ad6a6b1f65980f02a46df1a539d 252 SUPERFAMILY SSF46785 17 87 1.73E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_02692 7e0c3ad6a6b1f65980f02a46df1a539d 252 Pfam PF00392 Bacterial regulatory proteins, gntR family 21 83 7.6E-14 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PhaeoP54_02692 7e0c3ad6a6b1f65980f02a46df1a539d 252 Gene3D G3DSA:3.40.1410.10 86 249 2.4E-45 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily PhaeoP54_02692 7e0c3ad6a6b1f65980f02a46df1a539d 252 Gene3D G3DSA:1.10.10.10 16 84 4.1E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_02692 7e0c3ad6a6b1f65980f02a46df1a539d 252 SMART SM00866 106 242 2.8E-36 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 PhaeoP54_02692 7e0c3ad6a6b1f65980f02a46df1a539d 252 Pfam PF07702 UTRA domain 107 242 4.4E-37 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 PhaeoP54_02692 7e0c3ad6a6b1f65980f02a46df1a539d 252 SUPERFAMILY SSF64288 71 248 1.05E-48 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily PhaeoP54_03666 8fba87b95553dfaadba75e3c417e2829 157 SUPERFAMILY SSF46785 4 64 4.01E-11 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_03666 8fba87b95553dfaadba75e3c417e2829 157 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 32 51 2.7E-8 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 PhaeoP54_03666 8fba87b95553dfaadba75e3c417e2829 157 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 21 32 2.7E-8 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 PhaeoP54_03666 8fba87b95553dfaadba75e3c417e2829 157 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 5 21 2.7E-8 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 PhaeoP54_03666 8fba87b95553dfaadba75e3c417e2829 157 Pfam PF01037 Lrp/AsnC ligand binding domain 71 144 4.2E-17 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain PhaeoP54_03666 8fba87b95553dfaadba75e3c417e2829 157 SUPERFAMILY SSF54909 66 153 1.29E-14 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel PhaeoP54_03666 8fba87b95553dfaadba75e3c417e2829 157 SMART SM00344 5 114 7.5E-22 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 PhaeoP54_03666 8fba87b95553dfaadba75e3c417e2829 157 Gene3D G3DSA:3.30.70.920 59 141 5.6E-19 T 14-10-2018 PhaeoP54_03666 8fba87b95553dfaadba75e3c417e2829 157 Gene3D G3DSA:1.10.10.10 1 58 1.1E-11 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_03666 8fba87b95553dfaadba75e3c417e2829 157 Pfam PF13404 AsnC-type helix-turn-helix domain 5 46 7.4E-9 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 PhaeoP54_01447 e0ee7dcc7ae81232526f675f40a70d38 526 SUPERFAMILY SSF52540 251 388 1.9E-8 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_01447 e0ee7dcc7ae81232526f675f40a70d38 526 SUPERFAMILY SSF52540 9 162 8.73E-8 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_03714 54b95c1cf0e5154095b3d47a4f2a7826 543 Gene3D G3DSA:3.30.1120.10 453 529 8.3E-14 T 14-10-2018 PhaeoP54_03714 54b95c1cf0e5154095b3d47a4f2a7826 543 ProSitePatterns PS00149 Sulfatases signature 2. 108 118 - T 14-10-2018 IPR024607 Sulfatase, conserved site PhaeoP54_03714 54b95c1cf0e5154095b3d47a4f2a7826 543 Gene3D G3DSA:3.40.720.10 11 452 7.5E-133 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 PhaeoP54_03714 54b95c1cf0e5154095b3d47a4f2a7826 543 Pfam PF00884 Sulfatase 13 424 3.0E-76 T 14-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 PhaeoP54_03714 54b95c1cf0e5154095b3d47a4f2a7826 543 SUPERFAMILY SSF53649 12 520 4.22E-138 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 PhaeoP54_00128 059ec35248f70acae479166548d8b2d2 256 SUPERFAMILY SSF51621 2 253 2.9E-84 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 PhaeoP54_00128 059ec35248f70acae479166548d8b2d2 256 Gene3D G3DSA:3.20.20.60 3 256 2.4E-91 T 14-10-2018 PhaeoP54_00128 059ec35248f70acae479166548d8b2d2 256 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 18 243 4.1E-58 T 14-10-2018 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 PhaeoP54_02339 0fc1950f34eac6a1a9f38dfd3cb2300d 217 Pfam PF01063 Amino-transferase class IV 19 215 2.3E-36 T 14-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 PhaeoP54_02339 0fc1950f34eac6a1a9f38dfd3cb2300d 217 Gene3D G3DSA:3.30.470.10 8 85 4.6E-19 T 14-10-2018 PhaeoP54_02339 0fc1950f34eac6a1a9f38dfd3cb2300d 217 ProSitePatterns PS00770 Aminotransferases class-IV signature. 147 177 - T 14-10-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 PhaeoP54_02339 0fc1950f34eac6a1a9f38dfd3cb2300d 217 SUPERFAMILY SSF56752 17 215 4.19E-41 T 14-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 PhaeoP54_02339 0fc1950f34eac6a1a9f38dfd3cb2300d 217 Gene3D G3DSA:3.20.10.10 91 217 2.7E-37 T 14-10-2018 PhaeoP54_00980 6521b690bbabd69ada5d0e859e169c38 323 Gene3D G3DSA:1.10.3720.10 101 317 2.4E-23 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_00980 6521b690bbabd69ada5d0e859e169c38 323 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 35 87 1.1E-10 T 14-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain PhaeoP54_00980 6521b690bbabd69ada5d0e859e169c38 323 SUPERFAMILY SSF161098 106 302 6.28E-26 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_00980 6521b690bbabd69ada5d0e859e169c38 323 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 128 321 2.5E-25 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PhaeoP54_00937 ea65134a33a6ebc00118db2aa4e32a37 297 Hamap MF_00911 Cell division protein FtsQ [ftsQ]. 53 287 22.001 T 14-10-2018 IPR026579 Cell division protein FtsQ GO:0090529 PhaeoP54_00937 ea65134a33a6ebc00118db2aa4e32a37 297 Pfam PF03799 Cell division protein FtsQ 156 269 8.8E-11 T 14-10-2018 IPR005548 Cell division protein FtsQ/DivIB PhaeoP54_00937 ea65134a33a6ebc00118db2aa4e32a37 297 Gene3D G3DSA:3.40.50.11690 153 280 4.4E-5 T 14-10-2018 PhaeoP54_00937 ea65134a33a6ebc00118db2aa4e32a37 297 Pfam PF08478 POTRA domain, FtsQ-type 90 151 6.3E-5 T 14-10-2018 IPR013685 POTRA domain, FtsQ-type PhaeoP54_02922 0f45797f91c6a0fd1c1e3a0ffab30c0b 611 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 255 396 6.4E-54 T 14-10-2018 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 PhaeoP54_02922 0f45797f91c6a0fd1c1e3a0ffab30c0b 611 Gene3D G3DSA:3.40.50.300 30 199 9.5E-103 T 14-10-2018 PhaeoP54_02922 0f45797f91c6a0fd1c1e3a0ffab30c0b 611 Gene3D G3DSA:1.10.8.60 25 262 9.5E-103 T 14-10-2018 PhaeoP54_02922 0f45797f91c6a0fd1c1e3a0ffab30c0b 611 Gene3D G3DSA:1.20.272.10 264 384 6.8E-15 T 14-10-2018 PhaeoP54_02922 0f45797f91c6a0fd1c1e3a0ffab30c0b 611 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 20 380 2.7E-128 T 14-10-2018 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 PhaeoP54_02922 0f45797f91c6a0fd1c1e3a0ffab30c0b 611 SUPERFAMILY SSF52540 49 243 2.1E-53 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_02922 0f45797f91c6a0fd1c1e3a0ffab30c0b 611 SMART SM00382 54 201 8.9E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_02922 0f45797f91c6a0fd1c1e3a0ffab30c0b 611 Pfam PF12362 DNA polymerase III gamma and tau subunits C terminal 471 583 7.4E-37 T 14-10-2018 IPR022107 DNA polymerase III, subunit gamma/ tau, C-terminal PhaeoP54_02922 0f45797f91c6a0fd1c1e3a0ffab30c0b 611 Pfam PF13177 DNA polymerase III, delta subunit 37 200 1.3E-36 T 14-10-2018 PhaeoP54_02922 0f45797f91c6a0fd1c1e3a0ffab30c0b 611 SUPERFAMILY SSF48019 265 392 7.74E-31 T 14-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 PhaeoP54_01739 fc6410af2d1fa918fcb4305534f33871 293 SUPERFAMILY SSF47240 90 265 3.2E-16 T 14-10-2018 IPR009078 Ferritin-like superfamily PhaeoP54_01739 fc6410af2d1fa918fcb4305534f33871 293 PIRSF PIRSF012318 14 286 1.0E-91 T 14-10-2018 IPR011197 Uncharacterised conserved protein UCP012318 PhaeoP54_01739 fc6410af2d1fa918fcb4305534f33871 293 Pfam PF04305 Protein of unknown function (DUF455) 29 278 3.0E-94 T 14-10-2018 IPR007402 Protein of unknown function DUF455 PhaeoP54_01663 d7141a14d2eb47cc440d25a46d60de52 178 Gene3D G3DSA:2.40.50.140 104 167 5.8E-13 T 14-10-2018 PhaeoP54_01663 d7141a14d2eb47cc440d25a46d60de52 178 Gene3D G3DSA:2.40.50.140 6 74 7.1E-16 T 14-10-2018 PhaeoP54_01663 d7141a14d2eb47cc440d25a46d60de52 178 PRINTS PR00050 Cold shock protein signature 127 136 9.4E-8 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 PhaeoP54_01663 d7141a14d2eb47cc440d25a46d60de52 178 PRINTS PR00050 Cold shock protein signature 142 160 9.4E-8 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 PhaeoP54_01663 d7141a14d2eb47cc440d25a46d60de52 178 PRINTS PR00050 Cold shock protein signature 106 121 9.4E-8 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 PhaeoP54_01663 d7141a14d2eb47cc440d25a46d60de52 178 SMART SM00357 105 169 3.3E-6 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 PhaeoP54_01663 d7141a14d2eb47cc440d25a46d60de52 178 SMART SM00357 12 76 1.5E-7 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 PhaeoP54_01663 d7141a14d2eb47cc440d25a46d60de52 178 SUPERFAMILY SSF50249 102 169 3.18E-15 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold PhaeoP54_01663 d7141a14d2eb47cc440d25a46d60de52 178 SUPERFAMILY SSF50249 10 75 1.32E-16 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold PhaeoP54_01663 d7141a14d2eb47cc440d25a46d60de52 178 Pfam PF00313 'Cold-shock' DNA-binding domain 12 74 1.0E-12 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 PhaeoP54_01663 d7141a14d2eb47cc440d25a46d60de52 178 Pfam PF00313 'Cold-shock' DNA-binding domain 107 167 4.1E-13 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 PhaeoP54_02381 2b2b7342ba0208120995e1e2f96d7ab0 652 SUPERFAMILY SSF58104 291 573 1.57E-65 T 14-10-2018 PhaeoP54_02381 2b2b7342ba0208120995e1e2f96d7ab0 652 SUPERFAMILY SSF158472 213 260 7.45E-7 T 14-10-2018 PhaeoP54_02381 2b2b7342ba0208120995e1e2f96d7ab0 652 Gene3D G3DSA:1.20.1480.50 170 269 8.7E-8 T 14-10-2018 PhaeoP54_02381 2b2b7342ba0208120995e1e2f96d7ab0 652 SMART SM00304 211 264 5.8E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 PhaeoP54_02381 2b2b7342ba0208120995e1e2f96d7ab0 652 SMART SM00304 271 323 1.0 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 PhaeoP54_02381 2b2b7342ba0208120995e1e2f96d7ab0 652 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 385 539 1.3E-47 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 PhaeoP54_02381 2b2b7342ba0208120995e1e2f96d7ab0 652 Gene3D G3DSA:1.10.287.950 272 572 1.2E-74 T 14-10-2018 PhaeoP54_02381 2b2b7342ba0208120995e1e2f96d7ab0 652 Pfam PF00672 HAMP domain 213 258 3.9E-6 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 PhaeoP54_02381 2b2b7342ba0208120995e1e2f96d7ab0 652 SMART SM00283 324 571 1.4E-83 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 PhaeoP54_02813 4b1c3c83ea1c109a74698ac2e24203c3 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 69 6.0E-19 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PhaeoP54_02813 4b1c3c83ea1c109a74698ac2e24203c3 308 Gene3D G3DSA:3.40.190.10 170 271 9.4E-65 T 14-10-2018 PhaeoP54_02813 4b1c3c83ea1c109a74698ac2e24203c3 308 Pfam PF03466 LysR substrate binding domain 96 300 6.8E-44 T 14-10-2018 IPR005119 LysR, substrate-binding PhaeoP54_02813 4b1c3c83ea1c109a74698ac2e24203c3 308 SUPERFAMILY SSF46785 4 119 1.3E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_02813 4b1c3c83ea1c109a74698ac2e24203c3 308 SUPERFAMILY SSF53850 97 302 4.19E-44 T 14-10-2018 PhaeoP54_02813 4b1c3c83ea1c109a74698ac2e24203c3 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 47 58 3.7E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PhaeoP54_02813 4b1c3c83ea1c109a74698ac2e24203c3 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 26 37 3.7E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PhaeoP54_02813 4b1c3c83ea1c109a74698ac2e24203c3 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 37 47 3.7E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PhaeoP54_02813 4b1c3c83ea1c109a74698ac2e24203c3 308 Gene3D G3DSA:1.10.10.10 10 96 5.4E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_02813 4b1c3c83ea1c109a74698ac2e24203c3 308 Gene3D G3DSA:3.40.190.10 98 297 9.4E-65 T 14-10-2018 PhaeoP54_03433 5420932fd54f5ab12b15471333b5818e 302 Gene3D G3DSA:3.20.10.10 138 301 8.5E-43 T 14-10-2018 PhaeoP54_03433 5420932fd54f5ab12b15471333b5818e 302 Pfam PF01063 Amino-transferase class IV 47 270 5.5E-35 T 14-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 PhaeoP54_03433 5420932fd54f5ab12b15471333b5818e 302 SUPERFAMILY SSF56752 20 297 3.66E-70 T 14-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 PhaeoP54_03433 5420932fd54f5ab12b15471333b5818e 302 Gene3D G3DSA:3.30.470.10 1 137 3.8E-36 T 14-10-2018 PhaeoP54_01957 28218f8b59d002b13647adfddb2a162a 351 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 23 131 5.7E-28 T 14-10-2018 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 PhaeoP54_01957 28218f8b59d002b13647adfddb2a162a 351 SMART SM00839 145 350 6.4E-46 T 14-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 PhaeoP54_01957 28218f8b59d002b13647adfddb2a162a 351 Gene3D G3DSA:3.40.50.720 135 339 1.7E-125 T 14-10-2018 PhaeoP54_01957 28218f8b59d002b13647adfddb2a162a 351 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 67 81 3.0E-13 T 14-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 PhaeoP54_01957 28218f8b59d002b13647adfddb2a162a 351 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 287 298 3.0E-13 T 14-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 PhaeoP54_01957 28218f8b59d002b13647adfddb2a162a 351 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 177 197 3.0E-13 T 14-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 PhaeoP54_01957 28218f8b59d002b13647adfddb2a162a 351 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 150 320 1.1E-13 T 14-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 PhaeoP54_01957 28218f8b59d002b13647adfddb2a162a 351 SUPERFAMILY SSF51735 144 342 4.88E-44 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PhaeoP54_01957 28218f8b59d002b13647adfddb2a162a 351 SUPERFAMILY SSF53223 11 138 2.65E-43 T 14-10-2018 PhaeoP54_01957 28218f8b59d002b13647adfddb2a162a 351 Gene3D G3DSA:3.40.50.10860 12 346 1.7E-125 T 14-10-2018 PhaeoP54_01957 28218f8b59d002b13647adfddb2a162a 351 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 75 88 - T 14-10-2018 IPR033524 Leu/Phe/Val dehydrogenases active site Reactome: R-HSA-2151201|Reactome: R-HSA-70614 PhaeoP54_01957 28218f8b59d002b13647adfddb2a162a 351 PIRSF PIRSF000188 2 351 3.4E-133 T 14-10-2018 IPR016211 Glutamate/phenylalanine/leucine/valine dehydrogenase, bacterial/archaeal GO:0016639|GO:0055114 PhaeoP54_02033 b2a754a3134e5639ed9d8d1f91b1036b 86 Pfam PF03937 Flavinator of succinate dehydrogenase 10 73 7.1E-23 T 14-10-2018 IPR005631 Flavinator of succinate dehydrogenase PhaeoP54_02033 b2a754a3134e5639ed9d8d1f91b1036b 86 SUPERFAMILY SSF109910 7 73 5.89E-21 T 14-10-2018 IPR036714 Flavinator of succinate dehydrogenase superfamily PhaeoP54_02033 b2a754a3134e5639ed9d8d1f91b1036b 86 Gene3D G3DSA:1.10.150.250 6 86 8.3E-23 T 14-10-2018 IPR036714 Flavinator of succinate dehydrogenase superfamily PhaeoP54_00961 bb3cb0167a6b0b7ad5e23ef8640c4055 163 SUPERFAMILY SSF143744 22 157 1.96E-31 T 14-10-2018 IPR038084 GlcG-like domain superfamily PhaeoP54_00961 bb3cb0167a6b0b7ad5e23ef8640c4055 163 Pfam PF03928 Haem-degrading 25 154 8.7E-25 T 14-10-2018 IPR005624 Haem-degrading PhaeoP54_00961 bb3cb0167a6b0b7ad5e23ef8640c4055 163 Gene3D G3DSA:3.30.450.150 16 159 1.1E-31 T 14-10-2018 IPR038084 GlcG-like domain superfamily PhaeoP54_02826 967123ee402a3c7e12cbdc6b4527d5d0 395 SUPERFAMILY SSF55729 189 357 6.82E-41 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase PhaeoP54_02826 967123ee402a3c7e12cbdc6b4527d5d0 395 Gene3D G3DSA:3.40.630.30 189 338 2.3E-6 T 14-10-2018 PhaeoP54_02826 967123ee402a3c7e12cbdc6b4527d5d0 395 Pfam PF04339 Peptidogalycan biosysnthesis/recognition 14 388 1.5E-156 T 14-10-2018 IPR007434 Peptidogalycan biosysnthesis/recognition PhaeoP54_03078 4d7ce8a14572806c7f4344937ab8cb94 296 SUPERFAMILY SSF52540 14 163 7.08E-14 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_03078 4d7ce8a14572806c7f4344937ab8cb94 296 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 13 292 38.877 T 14-10-2018 IPR005337 RapZ-like family GO:0005524 PhaeoP54_03078 4d7ce8a14572806c7f4344937ab8cb94 296 Pfam PF03668 P-loop ATPase protein family 15 290 1.9E-82 T 14-10-2018 IPR005337 RapZ-like family GO:0005524 PhaeoP54_03078 4d7ce8a14572806c7f4344937ab8cb94 296 PIRSF PIRSF005052 13 295 2.1E-96 T 14-10-2018 IPR005337 RapZ-like family GO:0005524 PhaeoP54_00951 e0d07813b6c1da345418373bc492c48d 207 PRINTS PR00625 DnaJ domain signature 168 183 1.4E-6 T 14-10-2018 IPR001623 DnaJ domain PhaeoP54_00951 e0d07813b6c1da345418373bc492c48d 207 PRINTS PR00625 DnaJ domain signature 150 168 1.4E-6 T 14-10-2018 IPR001623 DnaJ domain PhaeoP54_00951 e0d07813b6c1da345418373bc492c48d 207 PRINTS PR00625 DnaJ domain signature 185 205 1.4E-6 T 14-10-2018 IPR001623 DnaJ domain PhaeoP54_00951 e0d07813b6c1da345418373bc492c48d 207 SMART SM00271 147 205 6.2E-9 T 14-10-2018 IPR001623 DnaJ domain PhaeoP54_00951 e0d07813b6c1da345418373bc492c48d 207 SUPERFAMILY SSF46565 148 203 3.93E-12 T 14-10-2018 IPR036869 Chaperone J-domain superfamily PhaeoP54_00951 e0d07813b6c1da345418373bc492c48d 207 Pfam PF00226 DnaJ domain 151 203 5.0E-10 T 14-10-2018 IPR001623 DnaJ domain PhaeoP54_00951 e0d07813b6c1da345418373bc492c48d 207 Gene3D G3DSA:1.10.287.110 133 205 1.0E-10 T 14-10-2018 IPR036869 Chaperone J-domain superfamily PhaeoP54_02702 4d8c0436f780df0b134872dfb0bc47fb 607 SUPERFAMILY SSF143975 3 419 1.31E-140 T 14-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 PhaeoP54_02702 4d8c0436f780df0b134872dfb0bc47fb 607 Hamap MF_02094 Phosphogluconate dehydratase [edd]. 3 602 55.935 T 14-10-2018 PhaeoP54_02702 4d8c0436f780df0b134872dfb0bc47fb 607 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 507 518 - T 14-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 PhaeoP54_02702 4d8c0436f780df0b134872dfb0bc47fb 607 SUPERFAMILY SSF52016 420 601 6.43E-56 T 14-10-2018 PhaeoP54_02702 4d8c0436f780df0b134872dfb0bc47fb 607 TIGRFAM TIGR01196 edd: phosphogluconate dehydratase 6 601 2.4E-284 T 14-10-2018 IPR004786 6-phosphogluconate dehydratase GO:0004456|GO:0009255 KEGG: 00030+4.2.1.12 PhaeoP54_02702 4d8c0436f780df0b134872dfb0bc47fb 607 Gene3D G3DSA:3.50.30.80 420 567 4.0E-50 T 14-10-2018 PhaeoP54_02702 4d8c0436f780df0b134872dfb0bc47fb 607 Pfam PF00920 Dehydratase family 68 598 8.6E-159 T 14-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 PhaeoP54_02702 4d8c0436f780df0b134872dfb0bc47fb 607 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 155 165 - T 14-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 PhaeoP54_01608 9e83c2c215b77fe0bafa1c6055e62648 367 Pfam PF01008 Initiation factor 2 subunit family 66 348 1.4E-57 T 14-10-2018 IPR000649 Initiation factor 2B-related GO:0044237 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174 PhaeoP54_01608 9e83c2c215b77fe0bafa1c6055e62648 367 Gene3D G3DSA:1.20.120.1840 7 190 3.3E-47 T 14-10-2018 PhaeoP54_01608 9e83c2c215b77fe0bafa1c6055e62648 367 Gene3D G3DSA:3.40.50.10470 191 358 7.2E-47 T 14-10-2018 PhaeoP54_01608 9e83c2c215b77fe0bafa1c6055e62648 367 Hamap MF_01678 Putative methylthioribose-1-phosphate isomerase [mtnA]. 7 359 34.622 T 14-10-2018 IPR005251 Methylthioribose-1-phosphate isomerase GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 PhaeoP54_01608 9e83c2c215b77fe0bafa1c6055e62648 367 SUPERFAMILY SSF100950 2 352 1.09E-108 T 14-10-2018 IPR037171 NagB/RpiA transferase-like PhaeoP54_01608 9e83c2c215b77fe0bafa1c6055e62648 367 TIGRFAM TIGR00524 eIF-2B_rel: eIF-2B alpha/beta/delta-related uncharacterized proteins 38 348 2.0E-86 T 14-10-2018 IPR011559 Initiation factor 2B alpha/beta/delta GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 PhaeoP54_01608 9e83c2c215b77fe0bafa1c6055e62648 367 TIGRFAM TIGR00512 salvage_mtnA: S-methyl-5-thioribose-1-phosphate isomerase 10 349 3.9E-126 T 14-10-2018 IPR005251 Methylthioribose-1-phosphate isomerase GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 PhaeoP54_00542 79536bbb355e423e1d2bf939d370294d 982 Gene3D G3DSA:1.10.730.20 700 982 2.8E-80 T 14-10-2018 PhaeoP54_00542 79536bbb355e423e1d2bf939d370294d 982 SUPERFAMILY SSF50677 220 444 1.26E-37 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 PhaeoP54_00542 79536bbb355e423e1d2bf939d370294d 982 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 22 893 9.2E-236 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 PhaeoP54_00542 79536bbb355e423e1d2bf939d370294d 982 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 9 982 19.616 T 14-10-2018 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5|Reactome: R-HSA-379726 PhaeoP54_00542 79536bbb355e423e1d2bf939d370294d 982 Gene3D G3DSA:3.90.740.10 212 449 6.7E-211 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 PhaeoP54_00542 79536bbb355e423e1d2bf939d370294d 982 SUPERFAMILY SSF47323 712 980 1.53E-57 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 PhaeoP54_00542 79536bbb355e423e1d2bf939d370294d 982 Gene3D G3DSA:3.40.50.620 32 689 6.7E-211 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PhaeoP54_00542 79536bbb355e423e1d2bf939d370294d 982 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 585 598 1.8E-30 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 PhaeoP54_00542 79536bbb355e423e1d2bf939d370294d 982 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 65 76 1.8E-30 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 PhaeoP54_00542 79536bbb355e423e1d2bf939d370294d 982 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 252 275 1.8E-30 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 PhaeoP54_00542 79536bbb355e423e1d2bf939d370294d 982 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 442 457 1.8E-30 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 PhaeoP54_00542 79536bbb355e423e1d2bf939d370294d 982 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 621 630 1.8E-30 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 PhaeoP54_00542 79536bbb355e423e1d2bf939d370294d 982 Pfam PF08264 Anticodon-binding domain of tRNA 744 893 2.4E-22 T 14-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 PhaeoP54_00542 79536bbb355e423e1d2bf939d370294d 982 SUPERFAMILY SSF52374 11 708 8.81E-121 T 14-10-2018 PhaeoP54_00542 79536bbb355e423e1d2bf939d370294d 982 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 72 83 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 PhaeoP54_00542 79536bbb355e423e1d2bf939d370294d 982 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 35 700 3.0E-170 T 14-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 PhaeoP54_00846 dadd47857f6b9d89b961cd1ab1e9fa6c 973 Pfam PF01571 Aminomethyltransferase folate-binding domain 590 850 3.6E-60 T 14-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain PhaeoP54_00846 dadd47857f6b9d89b961cd1ab1e9fa6c 973 TIGRFAM TIGR01372 soxA: sarcosine oxidase, alpha subunit family 9 972 0.0 T 14-10-2018 IPR006277 Sarcosine oxidase, alpha subunit GO:0008115|GO:0046653 KEGG: 00260+1.5.3.1|MetaCyc: PWY-3661|MetaCyc: PWY-4722 PhaeoP54_00846 dadd47857f6b9d89b961cd1ab1e9fa6c 973 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 13 97 5.3E-25 T 14-10-2018 PhaeoP54_00846 dadd47857f6b9d89b961cd1ab1e9fa6c 973 SUPERFAMILY SSF101790 879 972 5.89E-13 T 14-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal PhaeoP54_00846 dadd47857f6b9d89b961cd1ab1e9fa6c 973 Gene3D G3DSA:3.50.50.60 167 564 2.8E-111 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PhaeoP54_00846 dadd47857f6b9d89b961cd1ab1e9fa6c 973 Gene3D G3DSA:1.10.10.1100 481 557 2.8E-111 T 14-10-2018 PhaeoP54_00846 dadd47857f6b9d89b961cd1ab1e9fa6c 973 Gene3D G3DSA:3.30.1360.120 584 963 2.2E-71 T 14-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 PhaeoP54_00846 dadd47857f6b9d89b961cd1ab1e9fa6c 973 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 862 943 2.3E-9 T 14-10-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 PhaeoP54_00846 dadd47857f6b9d89b961cd1ab1e9fa6c 973 Pfam PF12831 FAD dependent oxidoreductase 167 218 9.8E-9 T 14-10-2018 IPR039649 Digeranylgeranylglycerophospholipid reductase, N-terminal PhaeoP54_00846 dadd47857f6b9d89b961cd1ab1e9fa6c 973 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 273 291 1.8E-7 T 14-10-2018 PhaeoP54_00846 dadd47857f6b9d89b961cd1ab1e9fa6c 973 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 168 187 1.8E-7 T 14-10-2018 PhaeoP54_00846 dadd47857f6b9d89b961cd1ab1e9fa6c 973 SUPERFAMILY SSF51905 166 505 1.49E-27 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PhaeoP54_00846 dadd47857f6b9d89b961cd1ab1e9fa6c 973 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 443 462 6.6E-9 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PhaeoP54_00846 dadd47857f6b9d89b961cd1ab1e9fa6c 973 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 167 189 6.6E-9 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PhaeoP54_00846 dadd47857f6b9d89b961cd1ab1e9fa6c 973 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 274 282 6.6E-9 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PhaeoP54_00846 dadd47857f6b9d89b961cd1ab1e9fa6c 973 Gene3D G3DSA:3.10.20.440 7 100 2.4E-9 T 14-10-2018 PhaeoP54_00846 dadd47857f6b9d89b961cd1ab1e9fa6c 973 SUPERFAMILY SSF103025 584 869 4.08E-72 T 14-10-2018 PhaeoP54_00846 dadd47857f6b9d89b961cd1ab1e9fa6c 973 Gene3D G3DSA:3.50.50.60 285 398 2.8E-111 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PhaeoP54_02820 07e3e70e1e0919ac1a50eb82140d60b1 269 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 13 258 5.4E-91 T 14-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 PhaeoP54_02820 07e3e70e1e0919ac1a50eb82140d60b1 269 PRINTS PR00599 Methionine aminopeptidase-1 signature 100 116 2.8E-21 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 PhaeoP54_02820 07e3e70e1e0919ac1a50eb82140d60b1 269 PRINTS PR00599 Methionine aminopeptidase-1 signature 78 91 2.8E-21 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 PhaeoP54_02820 07e3e70e1e0919ac1a50eb82140d60b1 269 PRINTS PR00599 Methionine aminopeptidase-1 signature 170 182 2.8E-21 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 PhaeoP54_02820 07e3e70e1e0919ac1a50eb82140d60b1 269 PRINTS PR00599 Methionine aminopeptidase-1 signature 201 213 2.8E-21 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 PhaeoP54_02820 07e3e70e1e0919ac1a50eb82140d60b1 269 SUPERFAMILY SSF55920 15 262 1.23E-80 T 14-10-2018 IPR036005 Creatinase/aminopeptidase-like PhaeoP54_02820 07e3e70e1e0919ac1a50eb82140d60b1 269 Gene3D G3DSA:3.90.230.10 9 268 3.5E-98 T 14-10-2018 PhaeoP54_02820 07e3e70e1e0919ac1a50eb82140d60b1 269 Hamap MF_01974 Methionine aminopeptidase [map]. 13 259 37.951 T 14-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 PhaeoP54_02820 07e3e70e1e0919ac1a50eb82140d60b1 269 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 176 194 - T 14-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 PhaeoP54_02820 07e3e70e1e0919ac1a50eb82140d60b1 269 Pfam PF00557 Metallopeptidase family M24 23 250 9.9E-48 T 14-10-2018 IPR000994 Peptidase M24 PhaeoP54_03711 61ecfe99fb5575f46012b472b47e82a7 233 Gene3D G3DSA:1.10.1200.10 6 66 3.6E-5 T 14-10-2018 IPR036736 ACP-like superfamily PhaeoP54_01278 c2428833ec994d370ec349936630f73f 157 Gene3D G3DSA:3.10.450.40 38 104 8.4E-8 T 14-10-2018 PhaeoP54_01278 c2428833ec994d370ec349936630f73f 157 Pfam PF03413 Peptidase propeptide and YPEB domain 44 101 3.2E-6 T 14-10-2018 IPR025711 PepSY domain PhaeoP54_01611 ef23cfe4ea5dbc3a17134a85f9af2d75 531 Gene3D G3DSA:3.10.105.10 289 507 1.1E-112 T 14-10-2018 PhaeoP54_01611 ef23cfe4ea5dbc3a17134a85f9af2d75 531 SUPERFAMILY SSF53850 33 519 6.52E-111 T 14-10-2018 PhaeoP54_01611 ef23cfe4ea5dbc3a17134a85f9af2d75 531 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 78 442 4.7E-80 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain PhaeoP54_01611 ef23cfe4ea5dbc3a17134a85f9af2d75 531 Gene3D G3DSA:3.90.76.10 44 209 1.1E-112 T 14-10-2018 PhaeoP54_01611 ef23cfe4ea5dbc3a17134a85f9af2d75 531 Gene3D G3DSA:3.40.190.10 210 516 1.1E-112 T 14-10-2018 PhaeoP54_01611 ef23cfe4ea5dbc3a17134a85f9af2d75 531 PIRSF PIRSF002741 3 531 7.6E-78 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 PhaeoP54_02301 b3204ee14c9f8db7cb0c300725bd9bb0 340 SMART SM00382 64 236 0.0028 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_02301 b3204ee14c9f8db7cb0c300725bd9bb0 340 Gene3D G3DSA:1.10.287.130 276 336 3.5E-13 T 14-10-2018 PhaeoP54_02301 b3204ee14c9f8db7cb0c300725bd9bb0 340 Pfam PF03308 ArgK protein 33 303 3.8E-91 T 14-10-2018 PhaeoP54_02301 b3204ee14c9f8db7cb0c300725bd9bb0 340 Gene3D G3DSA:3.40.50.300 60 272 7.9E-75 T 14-10-2018 PhaeoP54_02301 b3204ee14c9f8db7cb0c300725bd9bb0 340 Gene3D G3DSA:1.20.5.170 12 59 2.7E-17 T 14-10-2018 PhaeoP54_02301 b3204ee14c9f8db7cb0c300725bd9bb0 340 SUPERFAMILY SSF52540 13 330 7.5E-81 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_02301 b3204ee14c9f8db7cb0c300725bd9bb0 340 TIGRFAM TIGR00750 lao: LAO/AO transport system ATPase 28 333 5.3E-88 T 14-10-2018 IPR005129 SIMIBI class G3E GTPase, ArgK/MeaB GO:0003924|GO:0005525 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 PhaeoP54_01248 f1ebb85b3376d825d4321785c21518a2 437 SMART SM00530 10 65 1.4E-11 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PhaeoP54_01248 f1ebb85b3376d825d4321785c21518a2 437 Gene3D G3DSA:1.10.260.40 6 69 1.1E-12 T 14-10-2018 PhaeoP54_01248 f1ebb85b3376d825d4321785c21518a2 437 Pfam PF01381 Helix-turn-helix 11 63 6.2E-9 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PhaeoP54_01248 f1ebb85b3376d825d4321785c21518a2 437 SUPERFAMILY SSF47413 6 69 5.91E-12 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 PhaeoP54_01248 f1ebb85b3376d825d4321785c21518a2 437 Pfam PF09856 Predicted transcriptional regulator (DUF2083) 317 433 5.3E-11 T 14-10-2018 IPR018653 Domain of unknown function DUF2083,transcriptional regulator PhaeoP54_03877 d8ca2536335301c2f2171b63efbc5376 142 SUPERFAMILY SSF46955 2 125 1.79E-38 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily PhaeoP54_03877 d8ca2536335301c2f2171b63efbc5376 142 SMART SM00422 2 71 3.9E-32 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PhaeoP54_03877 d8ca2536335301c2f2171b63efbc5376 142 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 38 58 7.5E-16 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PhaeoP54_03877 d8ca2536335301c2f2171b63efbc5376 142 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 14 27 7.5E-16 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PhaeoP54_03877 d8ca2536335301c2f2171b63efbc5376 142 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 3 14 7.5E-16 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PhaeoP54_03877 d8ca2536335301c2f2171b63efbc5376 142 Gene3D G3DSA:1.10.1660.10 1 126 7.3E-39 T 14-10-2018 PhaeoP54_03877 d8ca2536335301c2f2171b63efbc5376 142 Pfam PF09278 MerR, DNA binding 45 108 2.7E-22 T 14-10-2018 IPR015358 Transcription regulator MerR, DNA binding PhaeoP54_03877 d8ca2536335301c2f2171b63efbc5376 142 Pfam PF00376 MerR family regulatory protein 3 40 1.8E-16 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PhaeoP54_00768 7fcd8130aafa64556aee496895d63099 309 Pfam PF05036 Sporulation related domain 237 307 1.4E-14 T 14-10-2018 IPR007730 Sporulation-like domain GO:0042834 PhaeoP54_00768 7fcd8130aafa64556aee496895d63099 309 SUPERFAMILY SSF110997 237 307 1.11E-13 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 PhaeoP54_00768 7fcd8130aafa64556aee496895d63099 309 Gene3D G3DSA:3.30.70.1070 237 308 1.7E-8 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 PhaeoP54_02766 d866ae7ab4e1f27e6df5e0f821a62332 858 Pfam PF08446 PAS fold 15 121 1.9E-16 T 14-10-2018 IPR013654 PAS fold-2 GO:0006355 PhaeoP54_02766 d866ae7ab4e1f27e6df5e0f821a62332 858 SMART SM00911 525 607 7.7E-25 T 14-10-2018 IPR011102 Signal transduction histidine kinase, HWE region GO:0004673 PhaeoP54_02766 d866ae7ab4e1f27e6df5e0f821a62332 858 SUPERFAMILY SSF52172 739 853 5.55E-16 T 14-10-2018 IPR011006 CheY-like superfamily PhaeoP54_02766 d866ae7ab4e1f27e6df5e0f821a62332 858 Gene3D G3DSA:3.30.450.40 14 477 2.9E-156 T 14-10-2018 IPR029016 GAF-like domain superfamily PhaeoP54_02766 d866ae7ab4e1f27e6df5e0f821a62332 858 PRINTS PR01033 Phytochrome signature 430 449 3.2E-17 T 14-10-2018 IPR001294 Phytochrome GO:0006355|GO:0009584 PhaeoP54_02766 d866ae7ab4e1f27e6df5e0f821a62332 858 PRINTS PR01033 Phytochrome signature 247 268 3.2E-17 T 14-10-2018 IPR001294 Phytochrome GO:0006355|GO:0009584 PhaeoP54_02766 d866ae7ab4e1f27e6df5e0f821a62332 858 PRINTS PR01033 Phytochrome signature 464 482 3.2E-17 T 14-10-2018 IPR001294 Phytochrome GO:0006355|GO:0009584 PhaeoP54_02766 d866ae7ab4e1f27e6df5e0f821a62332 858 PRINTS PR01033 Phytochrome signature 345 365 3.2E-17 T 14-10-2018 IPR001294 Phytochrome GO:0006355|GO:0009584 PhaeoP54_02766 d866ae7ab4e1f27e6df5e0f821a62332 858 PRINTS PR01033 Phytochrome signature 161 180 3.2E-17 T 14-10-2018 IPR001294 Phytochrome GO:0006355|GO:0009584 PhaeoP54_02766 d866ae7ab4e1f27e6df5e0f821a62332 858 SUPERFAMILY SSF55781 321 506 1.28E-52 T 14-10-2018 PhaeoP54_02766 d866ae7ab4e1f27e6df5e0f821a62332 858 SMART SM00448 738 846 2.6E-6 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PhaeoP54_02766 d866ae7ab4e1f27e6df5e0f821a62332 858 SUPERFAMILY SSF55781 139 316 1.92E-51 T 14-10-2018 PhaeoP54_02766 d866ae7ab4e1f27e6df5e0f821a62332 858 SMART SM00065 146 319 4.7E-10 T 14-10-2018 IPR003018 GAF domain GO:0005515 PhaeoP54_02766 d866ae7ab4e1f27e6df5e0f821a62332 858 Gene3D G3DSA:3.30.450.20 19 250 2.9E-156 T 14-10-2018 PhaeoP54_02766 d866ae7ab4e1f27e6df5e0f821a62332 858 Pfam PF00360 Phytochrome region 326 503 6.3E-48 T 14-10-2018 IPR013515 Phytochrome, central region GO:0006355|GO:0009584|GO:0018298 PhaeoP54_02766 d866ae7ab4e1f27e6df5e0f821a62332 858 Gene3D G3DSA:3.40.50.2300 738 856 9.9E-32 T 14-10-2018 PhaeoP54_02766 d866ae7ab4e1f27e6df5e0f821a62332 858 Gene3D G3DSA:3.30.450.270 318 495 2.9E-156 T 14-10-2018 PhaeoP54_02766 d866ae7ab4e1f27e6df5e0f821a62332 858 Pfam PF00072 Response regulator receiver domain 741 842 5.5E-7 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PhaeoP54_02766 d866ae7ab4e1f27e6df5e0f821a62332 858 Pfam PF01590 GAF domain 146 306 1.0E-15 T 14-10-2018 IPR003018 GAF domain GO:0005515 PhaeoP54_02766 d866ae7ab4e1f27e6df5e0f821a62332 858 SUPERFAMILY SSF55785 7 123 2.56E-30 T 14-10-2018 IPR035965 PAS domain superfamily PhaeoP54_02766 d866ae7ab4e1f27e6df5e0f821a62332 858 SUPERFAMILY SSF55874 596 707 6.67E-6 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PhaeoP54_02766 d866ae7ab4e1f27e6df5e0f821a62332 858 Pfam PF07536 HWE histidine kinase 525 607 4.5E-21 T 14-10-2018 IPR011102 Signal transduction histidine kinase, HWE region GO:0004673 PhaeoP54_02766 d866ae7ab4e1f27e6df5e0f821a62332 858 Gene3D G3DSA:3.30.565.10 598 712 1.3E-7 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PhaeoP54_03224 12771f06e973e63c50f6b77d0ac32a78 580 Gene3D G3DSA:1.50.10.100 53 303 6.8E-21 T 14-10-2018 IPR008929 Chondroitin AC/alginate lyase Reactome: R-HSA-2022923 PhaeoP54_03224 12771f06e973e63c50f6b77d0ac32a78 580 Gene3D G3DSA:2.70.98.70 309 448 2.5E-6 T 14-10-2018 PhaeoP54_03224 12771f06e973e63c50f6b77d0ac32a78 580 SUPERFAMILY SSF48230 79 250 6.04E-8 T 14-10-2018 IPR008929 Chondroitin AC/alginate lyase Reactome: R-HSA-2022923 PhaeoP54_03224 12771f06e973e63c50f6b77d0ac32a78 580 Pfam PF07940 Heparinase II/III-like protein 299 557 3.7E-66 T 14-10-2018 IPR012480 Heparinase II/III-like GO:0016829 PhaeoP54_00102 aecb187968645d88d3c5c289a9ad5d55 414 SUPERFAMILY SSF103473 6 405 1.96E-56 T 14-10-2018 IPR036259 MFS transporter superfamily PhaeoP54_00102 aecb187968645d88d3c5c289a9ad5d55 414 Pfam PF07690 Major Facilitator Superfamily 16 367 1.4E-36 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PhaeoP54_00102 aecb187968645d88d3c5c289a9ad5d55 414 Gene3D G3DSA:1.20.1250.20 6 405 5.4E-48 T 14-10-2018 PhaeoP54_00448 3efbf0289e76ac0eeef889d5a59a6e13 299 Pfam PF00571 CBS domain 74 126 0.0011 T 14-10-2018 IPR000644 CBS domain PhaeoP54_00448 3efbf0289e76ac0eeef889d5a59a6e13 299 Pfam PF00571 CBS domain 144 193 3.2E-7 T 14-10-2018 IPR000644 CBS domain PhaeoP54_00448 3efbf0289e76ac0eeef889d5a59a6e13 299 Gene3D G3DSA:3.10.580.10 60 206 1.7E-45 T 14-10-2018 PhaeoP54_00448 3efbf0289e76ac0eeef889d5a59a6e13 299 SUPERFAMILY SSF54631 69 210 3.16E-29 T 14-10-2018 PhaeoP54_00448 3efbf0289e76ac0eeef889d5a59a6e13 299 Pfam PF03471 Transporter associated domain 214 294 5.9E-15 T 14-10-2018 IPR005170 Transporter-associated domain PhaeoP54_00448 3efbf0289e76ac0eeef889d5a59a6e13 299 SUPERFAMILY SSF56176 210 295 6.54E-17 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 PhaeoP54_00448 3efbf0289e76ac0eeef889d5a59a6e13 299 Gene3D G3DSA:3.30.465.10 211 295 3.1E-24 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 PhaeoP54_00448 3efbf0289e76ac0eeef889d5a59a6e13 299 SMART SM01091 211 296 3.2E-22 T 14-10-2018 IPR005170 Transporter-associated domain PhaeoP54_01962 4d7a5d5276fae6e00c5f7c4cd0122211 804 TIGRFAM TIGR00763 lon: endopeptidase La 10 768 3.2E-299 T 14-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 PhaeoP54_01962 4d7a5d5276fae6e00c5f7c4cd0122211 804 SMART SM00464 8 200 4.7E-70 T 14-10-2018 IPR003111 Lon, substrate-binding domain PhaeoP54_01962 4d7a5d5276fae6e00c5f7c4cd0122211 804 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 700 719 2.6E-52 T 14-10-2018 PhaeoP54_01962 4d7a5d5276fae6e00c5f7c4cd0122211 804 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 592 608 2.6E-52 T 14-10-2018 PhaeoP54_01962 4d7a5d5276fae6e00c5f7c4cd0122211 804 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 354 373 2.6E-52 T 14-10-2018 PhaeoP54_01962 4d7a5d5276fae6e00c5f7c4cd0122211 804 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 670 689 2.6E-52 T 14-10-2018 PhaeoP54_01962 4d7a5d5276fae6e00c5f7c4cd0122211 804 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 723 741 2.6E-52 T 14-10-2018 PhaeoP54_01962 4d7a5d5276fae6e00c5f7c4cd0122211 804 Gene3D G3DSA:3.40.50.300 311 487 3.1E-65 T 14-10-2018 PhaeoP54_01962 4d7a5d5276fae6e00c5f7c4cd0122211 804 SUPERFAMILY SSF52540 311 587 3.2E-53 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_01962 4d7a5d5276fae6e00c5f7c4cd0122211 804 SUPERFAMILY SSF54211 592 768 5.31E-57 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold PhaeoP54_01962 4d7a5d5276fae6e00c5f7c4cd0122211 804 Gene3D G3DSA:3.30.230.10 590 777 4.7E-78 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PhaeoP54_01962 4d7a5d5276fae6e00c5f7c4cd0122211 804 Gene3D G3DSA:2.30.130.40 2 116 4.0E-33 T 14-10-2018 PhaeoP54_01962 4d7a5d5276fae6e00c5f7c4cd0122211 804 SUPERFAMILY SSF88697 10 199 3.48E-43 T 14-10-2018 IPR015947 PUA-like superfamily PhaeoP54_01962 4d7a5d5276fae6e00c5f7c4cd0122211 804 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 9 199 3.3E-40 T 14-10-2018 IPR003111 Lon, substrate-binding domain PhaeoP54_01962 4d7a5d5276fae6e00c5f7c4cd0122211 804 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 673 681 - T 14-10-2018 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 PhaeoP54_01962 4d7a5d5276fae6e00c5f7c4cd0122211 804 Hamap MF_01973 Lon protease [lon]. 9 769 70.898 T 14-10-2018 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 PhaeoP54_01962 4d7a5d5276fae6e00c5f7c4cd0122211 804 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 567 769 7.0E-94 T 14-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 PhaeoP54_01962 4d7a5d5276fae6e00c5f7c4cd0122211 804 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 350 484 5.3E-21 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 PhaeoP54_01962 4d7a5d5276fae6e00c5f7c4cd0122211 804 Gene3D G3DSA:1.20.58.1480 120 243 4.5E-43 T 14-10-2018 PhaeoP54_01962 4d7a5d5276fae6e00c5f7c4cd0122211 804 PIRSF PIRSF001174 1 772 0.0 T 14-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 PhaeoP54_01962 4d7a5d5276fae6e00c5f7c4cd0122211 804 SMART SM00382 346 492 3.8E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_01962 4d7a5d5276fae6e00c5f7c4cd0122211 804 Gene3D G3DSA:1.10.8.60 488 581 2.9E-32 T 14-10-2018 PhaeoP54_01309 c4b4dc83d50f2f0f232336a735714620 385 Gene3D G3DSA:1.10.150.80 199 291 5.4E-16 T 14-10-2018 PhaeoP54_01309 c4b4dc83d50f2f0f232336a735714620 385 SUPERFAMILY SSF47819 309 371 2.75E-9 T 14-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 PhaeoP54_01309 c4b4dc83d50f2f0f232336a735714620 385 Hamap MF_01899 Ribonuclease D [rnd]. 1 368 43.192 T 14-10-2018 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 PhaeoP54_01309 c4b4dc83d50f2f0f232336a735714620 385 Gene3D G3DSA:3.30.420.10 1 194 4.7E-60 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 PhaeoP54_01309 c4b4dc83d50f2f0f232336a735714620 385 Pfam PF00570 HRDC domain 216 263 5.0E-10 T 14-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 PhaeoP54_01309 c4b4dc83d50f2f0f232336a735714620 385 TIGRFAM TIGR01388 rnd: ribonuclease D 5 367 7.9E-113 T 14-10-2018 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 PhaeoP54_01309 c4b4dc83d50f2f0f232336a735714620 385 SUPERFAMILY SSF53098 4 208 2.78E-64 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily PhaeoP54_01309 c4b4dc83d50f2f0f232336a735714620 385 SMART SM00474 1 174 2.0E-31 T 14-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 PhaeoP54_01309 c4b4dc83d50f2f0f232336a735714620 385 Pfam PF01612 3'-5' exonuclease 3 173 4.0E-36 T 14-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 PhaeoP54_01309 c4b4dc83d50f2f0f232336a735714620 385 SUPERFAMILY SSF47819 197 296 1.01E-21 T 14-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 PhaeoP54_02748 019254f81d7f159d65cfda3cf8345cfd 205 SUPERFAMILY SSF51182 72 192 1.1E-27 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily PhaeoP54_02748 019254f81d7f159d65cfda3cf8345cfd 205 Gene3D G3DSA:1.10.260.40 20 84 1.3E-16 T 14-10-2018 PhaeoP54_02748 019254f81d7f159d65cfda3cf8345cfd 205 SMART SM00530 24 79 1.6E-13 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PhaeoP54_02748 019254f81d7f159d65cfda3cf8345cfd 205 Pfam PF01381 Helix-turn-helix 25 79 7.1E-13 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PhaeoP54_02748 019254f81d7f159d65cfda3cf8345cfd 205 Pfam PF07883 Cupin domain 124 190 7.0E-16 T 14-10-2018 IPR013096 Cupin 2, conserved barrel PhaeoP54_02748 019254f81d7f159d65cfda3cf8345cfd 205 Gene3D G3DSA:2.60.120.10 87 190 4.3E-19 T 14-10-2018 IPR014710 RmlC-like jelly roll fold PhaeoP54_02748 019254f81d7f159d65cfda3cf8345cfd 205 SUPERFAMILY SSF47413 20 84 2.31E-16 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 PhaeoP54_02233 606c78c6afa68fa723e88ac910c6bdd6 210 SMART SM00421 139 196 1.3E-20 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PhaeoP54_02233 606c78c6afa68fa723e88ac910c6bdd6 210 SUPERFAMILY SSF55785 14 133 1.74E-18 T 14-10-2018 IPR035965 PAS domain superfamily PhaeoP54_02233 606c78c6afa68fa723e88ac910c6bdd6 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 172 184 7.1E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PhaeoP54_02233 606c78c6afa68fa723e88ac910c6bdd6 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 156 172 7.1E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PhaeoP54_02233 606c78c6afa68fa723e88ac910c6bdd6 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 142 156 7.1E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PhaeoP54_02233 606c78c6afa68fa723e88ac910c6bdd6 210 Gene3D G3DSA:3.30.450.20 25 135 2.7E-24 T 14-10-2018 PhaeoP54_02233 606c78c6afa68fa723e88ac910c6bdd6 210 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 33 116 7.8E-14 T 14-10-2018 IPR000014 PAS domain PhaeoP54_02233 606c78c6afa68fa723e88ac910c6bdd6 210 SUPERFAMILY SSF46894 133 194 2.01E-19 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PhaeoP54_02233 606c78c6afa68fa723e88ac910c6bdd6 210 Pfam PF13426 PAS domain 33 134 1.6E-9 T 14-10-2018 IPR000014 PAS domain PhaeoP54_02233 606c78c6afa68fa723e88ac910c6bdd6 210 Pfam PF00196 Bacterial regulatory proteins, luxR family 141 192 4.4E-19 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PhaeoP54_02233 606c78c6afa68fa723e88ac910c6bdd6 210 ProSitePatterns PS00622 LuxR-type HTH domain signature. 156 183 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PhaeoP54_02233 606c78c6afa68fa723e88ac910c6bdd6 210 Gene3D G3DSA:1.10.10.10 136 196 2.7E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_03740 36dcd43b50055256428c0b2a5efab596 407 Pfam PF07732 Multicopper oxidase 120 224 5.5E-8 T 14-10-2018 IPR011707 Multicopper oxidase, type 3 GO:0005507 PhaeoP54_03740 36dcd43b50055256428c0b2a5efab596 407 SUPERFAMILY SSF49503 74 228 1.94E-34 T 14-10-2018 IPR008972 Cupredoxin PhaeoP54_03740 36dcd43b50055256428c0b2a5efab596 407 TIGRFAM TIGR02376 Cu_nitrite_red: nitrite reductase, copper-containing 77 402 1.1E-140 T 14-10-2018 IPR001287 Nitrite reductase, copper-type GO:0005507|GO:0006807|GO:0050421|GO:0055114 KEGG: 00910+1.7.2.1|MetaCyc: PWY-6523|MetaCyc: PWY-6748|MetaCyc: PWY-7084 PhaeoP54_03740 36dcd43b50055256428c0b2a5efab596 407 Gene3D G3DSA:2.60.40.420 70 223 2.9E-34 T 14-10-2018 IPR008972 Cupredoxin PhaeoP54_03740 36dcd43b50055256428c0b2a5efab596 407 SUPERFAMILY SSF49503 231 402 4.53E-70 T 14-10-2018 IPR008972 Cupredoxin PhaeoP54_03740 36dcd43b50055256428c0b2a5efab596 407 Pfam PF00394 Multicopper oxidase 242 390 1.1E-15 T 14-10-2018 IPR001117 Multicopper oxidase, type 1 GO:0055114 PhaeoP54_03740 36dcd43b50055256428c0b2a5efab596 407 PRINTS PR00695 Copper containing nitrite reductase signature 206 222 1.8E-39 T 14-10-2018 IPR001287 Nitrite reductase, copper-type GO:0005507|GO:0006807|GO:0050421|GO:0055114 KEGG: 00910+1.7.2.1|MetaCyc: PWY-6523|MetaCyc: PWY-6748|MetaCyc: PWY-7084 PhaeoP54_03740 36dcd43b50055256428c0b2a5efab596 407 PRINTS PR00695 Copper containing nitrite reductase signature 145 162 1.8E-39 T 14-10-2018 IPR001287 Nitrite reductase, copper-type GO:0005507|GO:0006807|GO:0050421|GO:0055114 KEGG: 00910+1.7.2.1|MetaCyc: PWY-6523|MetaCyc: PWY-6748|MetaCyc: PWY-7084 PhaeoP54_03740 36dcd43b50055256428c0b2a5efab596 407 PRINTS PR00695 Copper containing nitrite reductase signature 99 117 1.8E-39 T 14-10-2018 IPR001287 Nitrite reductase, copper-type GO:0005507|GO:0006807|GO:0050421|GO:0055114 KEGG: 00910+1.7.2.1|MetaCyc: PWY-6523|MetaCyc: PWY-6748|MetaCyc: PWY-7084 PhaeoP54_03740 36dcd43b50055256428c0b2a5efab596 407 PRINTS PR00695 Copper containing nitrite reductase signature 162 181 1.8E-39 T 14-10-2018 IPR001287 Nitrite reductase, copper-type GO:0005507|GO:0006807|GO:0050421|GO:0055114 KEGG: 00910+1.7.2.1|MetaCyc: PWY-6523|MetaCyc: PWY-6748|MetaCyc: PWY-7084 PhaeoP54_03740 36dcd43b50055256428c0b2a5efab596 407 PRINTS PR00695 Copper containing nitrite reductase signature 187 202 1.8E-39 T 14-10-2018 IPR001287 Nitrite reductase, copper-type GO:0005507|GO:0006807|GO:0050421|GO:0055114 KEGG: 00910+1.7.2.1|MetaCyc: PWY-6523|MetaCyc: PWY-6748|MetaCyc: PWY-7084 PhaeoP54_03740 36dcd43b50055256428c0b2a5efab596 407 Gene3D G3DSA:2.60.40.420 224 404 1.7E-46 T 14-10-2018 IPR008972 Cupredoxin PhaeoP54_03536 a0746cc6e9b8524220a12d7fe80b81b6 252 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 224 246 1.2E-6 T 14-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal PhaeoP54_03536 a0746cc6e9b8524220a12d7fe80b81b6 252 Gene3D G3DSA:3.40.50.300 13 251 1.1E-67 T 14-10-2018 PhaeoP54_03536 a0746cc6e9b8524220a12d7fe80b81b6 252 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PhaeoP54_03536 a0746cc6e9b8524220a12d7fe80b81b6 252 SUPERFAMILY SSF52540 15 247 2.89E-65 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_03536 a0746cc6e9b8524220a12d7fe80b81b6 252 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 15 250 1.2E-108 T 14-10-2018 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 PhaeoP54_03536 a0746cc6e9b8524220a12d7fe80b81b6 252 Pfam PF00005 ABC transporter 31 176 1.1E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PhaeoP54_03536 a0746cc6e9b8524220a12d7fe80b81b6 252 SMART SM00382 39 226 5.4E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_03228 066ffbf5b2123f00816afe448bd897c1 273 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 11 272 1.3E-80 T 14-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 PhaeoP54_03228 066ffbf5b2123f00816afe448bd897c1 273 SUPERFAMILY SSF51735 9 273 1.15E-45 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PhaeoP54_03228 066ffbf5b2123f00816afe448bd897c1 273 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 9 272 31.838 T 14-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 PhaeoP54_03228 066ffbf5b2123f00816afe448bd897c1 273 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 11 132 3.4E-31 T 14-10-2018 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 PhaeoP54_03228 066ffbf5b2123f00816afe448bd897c1 273 Gene3D G3DSA:3.40.50.720 12 271 2.2E-94 T 14-10-2018 PhaeoP54_03228 066ffbf5b2123f00816afe448bd897c1 273 PIRSF PIRSF000161 9 273 3.6E-76 T 14-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 PhaeoP54_03228 066ffbf5b2123f00816afe448bd897c1 273 SUPERFAMILY SSF55347 134 243 1.2E-35 T 14-10-2018 PhaeoP54_03228 066ffbf5b2123f00816afe448bd897c1 273 Gene3D G3DSA:3.30.360.10 134 241 2.2E-94 T 14-10-2018 PhaeoP54_03228 066ffbf5b2123f00816afe448bd897c1 273 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 157 174 - T 14-10-2018 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 PhaeoP54_03228 066ffbf5b2123f00816afe448bd897c1 273 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 135 271 4.4E-42 T 14-10-2018 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 PhaeoP54_03632 ea7742c6a68ba42c8a9bc466def26783 404 SUPERFAMILY SSF53067 89 390 7.21E-49 T 14-10-2018 PhaeoP54_03632 ea7742c6a68ba42c8a9bc466def26783 404 Gene3D G3DSA:3.30.420.40 95 384 2.2E-74 T 14-10-2018 PhaeoP54_03632 ea7742c6a68ba42c8a9bc466def26783 404 Pfam PF00480 ROK family 91 389 2.0E-54 T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 PhaeoP54_03632 ea7742c6a68ba42c8a9bc466def26783 404 ProSitePatterns PS01125 ROK family signature. 223 250 - T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 PhaeoP54_03632 ea7742c6a68ba42c8a9bc466def26783 404 SUPERFAMILY SSF46785 13 78 9.1E-14 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_03632 ea7742c6a68ba42c8a9bc466def26783 404 Gene3D G3DSA:1.10.10.10 12 83 2.6E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_03632 ea7742c6a68ba42c8a9bc466def26783 404 Gene3D G3DSA:3.30.420.40 213 374 2.2E-74 T 14-10-2018 PhaeoP54_01172 28e98097750b4d16c61bd407d29edca7 762 SMART SM00919 170 407 1.1E-135 T 14-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 PhaeoP54_01172 28e98097750b4d16c61bd407d29edca7 762 SUPERFAMILY SSF53223 17 168 2.45E-49 T 14-10-2018 PhaeoP54_01172 28e98097750b4d16c61bd407d29edca7 762 Gene3D G3DSA:3.40.50.10380 3 167 1.9E-63 T 14-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 PhaeoP54_01172 28e98097750b4d16c61bd407d29edca7 762 Gene3D G3DSA:3.40.50.10950 452 754 2.4E-71 T 14-10-2018 PhaeoP54_01172 28e98097750b4d16c61bd407d29edca7 762 SUPERFAMILY SSF53659 436 758 1.73E-79 T 14-10-2018 PhaeoP54_01172 28e98097750b4d16c61bd407d29edca7 762 Pfam PF01515 Phosphate acetyl/butaryl transferase 436 754 2.0E-72 T 14-10-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 PhaeoP54_01172 28e98097750b4d16c61bd407d29edca7 762 Pfam PF00390 Malic enzyme, N-terminal domain 26 122 4.2E-21 T 14-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 PhaeoP54_01172 28e98097750b4d16c61bd407d29edca7 762 SUPERFAMILY SSF51735 170 459 1.17E-84 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PhaeoP54_01172 28e98097750b4d16c61bd407d29edca7 762 Pfam PF03949 Malic enzyme, NAD binding domain 172 367 4.7E-21 T 14-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 PhaeoP54_01172 28e98097750b4d16c61bd407d29edca7 762 Gene3D G3DSA:3.40.50.10750 579 731 2.4E-71 T 14-10-2018 PhaeoP54_01172 28e98097750b4d16c61bd407d29edca7 762 PIRSF PIRSF036684 5 761 0.0 T 14-10-2018 IPR012188 NAD(P)-dependent malic enzyme GO:0004470|GO:0006108|GO:0046872 KEGG: 00620+1.1.1.40|KEGG: 00710+1.1.1.40|MetaCyc: PWY-241|MetaCyc: PWY-7117 PhaeoP54_01172 28e98097750b4d16c61bd407d29edca7 762 Gene3D G3DSA:3.40.50.720 168 451 1.3E-80 T 14-10-2018 PhaeoP54_01172 28e98097750b4d16c61bd407d29edca7 762 SMART SM01274 25 158 4.4E-70 T 14-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 PhaeoP54_03557 30c7d519b9bb70ccda90fdead0f00c66 106 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 41 56 5.4E-12 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 PhaeoP54_03557 30c7d519b9bb70ccda90fdead0f00c66 106 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 8 23 5.4E-12 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 PhaeoP54_03557 30c7d519b9bb70ccda90fdead0f00c66 106 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 56 71 5.4E-12 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 PhaeoP54_03557 30c7d519b9bb70ccda90fdead0f00c66 106 Pfam PF01022 Bacterial regulatory protein, arsR family 13 58 1.5E-12 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 PhaeoP54_03557 30c7d519b9bb70ccda90fdead0f00c66 106 SUPERFAMILY SSF46785 3 102 1.94E-26 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_03557 30c7d519b9bb70ccda90fdead0f00c66 106 SMART SM00418 6 81 2.0E-21 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 PhaeoP54_03557 30c7d519b9bb70ccda90fdead0f00c66 106 Gene3D G3DSA:1.10.10.10 1 106 8.3E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_00519 4f631a71c3416a45fb0f6c184b7f64de 161 Pfam PF04115 Ureidoglycolate lyase 1 158 2.7E-45 T 14-10-2018 IPR007247 Ureidoglycolate lyase GO:0000256|GO:0050385 KEGG: 00230+4.3.2.3|MetaCyc: PWY-5694|MetaCyc: PWY-5705 PhaeoP54_00519 4f631a71c3416a45fb0f6c184b7f64de 161 SUPERFAMILY SSF51182 1 159 8.72E-55 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily PhaeoP54_00519 4f631a71c3416a45fb0f6c184b7f64de 161 Gene3D G3DSA:2.60.120.480 1 160 1.8E-41 T 14-10-2018 IPR024060 Ureidoglycolate lyase domain superfamily GO:0004848 KEGG: 00230+4.3.2.3|MetaCyc: PWY-5694|MetaCyc: PWY-5705 PhaeoP54_00519 4f631a71c3416a45fb0f6c184b7f64de 161 PIRSF PIRSF017306 1 151 2.1E-22 T 14-10-2018 IPR007247 Ureidoglycolate lyase GO:0000256|GO:0050385 KEGG: 00230+4.3.2.3|MetaCyc: PWY-5694|MetaCyc: PWY-5705 PhaeoP54_01825 cced0cb6a6de55b9ad19cf9cb4443e07 208 Pfam PF00005 ABC transporter 18 148 6.3E-24 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PhaeoP54_01825 cced0cb6a6de55b9ad19cf9cb4443e07 208 SMART SM00382 27 201 7.6E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_01825 cced0cb6a6de55b9ad19cf9cb4443e07 208 Gene3D G3DSA:3.40.50.300 1 185 3.1E-40 T 14-10-2018 PhaeoP54_01825 cced0cb6a6de55b9ad19cf9cb4443e07 208 TIGRFAM TIGR01189 ccmA: heme ABC exporter, ATP-binding protein CcmA 6 184 1.2E-64 T 14-10-2018 IPR005895 ABC transporter, haem export, CcmA GO:0005215|GO:0017004 PhaeoP54_01825 cced0cb6a6de55b9ad19cf9cb4443e07 208 ProSitePatterns PS00211 ABC transporters family signature. 121 135 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PhaeoP54_01825 cced0cb6a6de55b9ad19cf9cb4443e07 208 SUPERFAMILY SSF52540 3 178 5.05E-40 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_01996 aafa8c3994cec397aec660ee6717a38c 787 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 155 720 5.7E-171 T 14-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PhaeoP54_01996 aafa8c3994cec397aec660ee6717a38c 787 Gene3D G3DSA:3.30.365.10 466 635 6.8E-135 T 14-10-2018 PhaeoP54_01996 aafa8c3994cec397aec660ee6717a38c 787 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 21 139 1.5E-27 T 14-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead PhaeoP54_01996 aafa8c3994cec397aec660ee6717a38c 787 SMART SM01008 21 139 1.7E-53 T 14-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead PhaeoP54_01996 aafa8c3994cec397aec660ee6717a38c 787 Gene3D G3DSA:3.90.1170.50 2 139 2.6E-45 T 14-10-2018 PhaeoP54_01996 aafa8c3994cec397aec660ee6717a38c 787 Gene3D G3DSA:3.30.365.10 198 295 1.0E-59 T 14-10-2018 PhaeoP54_01996 aafa8c3994cec397aec660ee6717a38c 787 SUPERFAMILY SSF54665 3 160 4.06E-47 T 14-10-2018 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily PhaeoP54_01996 aafa8c3994cec397aec660ee6717a38c 787 Gene3D G3DSA:3.30.365.10 381 761 6.8E-135 T 14-10-2018 PhaeoP54_01996 aafa8c3994cec397aec660ee6717a38c 787 Gene3D G3DSA:3.30.365.10 153 372 1.0E-59 T 14-10-2018 PhaeoP54_01996 aafa8c3994cec397aec660ee6717a38c 787 SUPERFAMILY SSF56003 131 786 5.63E-199 T 14-10-2018 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GO:0016491|GO:0055114 PhaeoP54_00626 cc3e4ae2d6b0d9a78510756df3665ca6 448 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 158 254 3.6E-17 T 14-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PhaeoP54_00626 cc3e4ae2d6b0d9a78510756df3665ca6 448 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 174 193 3.2E-12 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PhaeoP54_00626 cc3e4ae2d6b0d9a78510756df3665ca6 448 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 95 109 3.2E-12 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PhaeoP54_00626 cc3e4ae2d6b0d9a78510756df3665ca6 448 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 234 249 3.2E-12 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PhaeoP54_00626 cc3e4ae2d6b0d9a78510756df3665ca6 448 SUPERFAMILY SSF53738 2 166 2.43E-45 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PhaeoP54_00626 cc3e4ae2d6b0d9a78510756df3665ca6 448 Gene3D G3DSA:3.40.120.10 1 154 2.2E-48 T 14-10-2018 PhaeoP54_00626 cc3e4ae2d6b0d9a78510756df3665ca6 448 SUPERFAMILY SSF53738 157 256 1.26E-26 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PhaeoP54_00626 cc3e4ae2d6b0d9a78510756df3665ca6 448 Gene3D G3DSA:3.40.120.10 174 363 5.7E-64 T 14-10-2018 PhaeoP54_00626 cc3e4ae2d6b0d9a78510756df3665ca6 448 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 96 105 - T 14-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PhaeoP54_00626 cc3e4ae2d6b0d9a78510756df3665ca6 448 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 258 367 2.2E-32 T 14-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PhaeoP54_00626 cc3e4ae2d6b0d9a78510756df3665ca6 448 Gene3D G3DSA:3.30.310.50 371 448 1.5E-22 T 14-10-2018 PhaeoP54_00626 cc3e4ae2d6b0d9a78510756df3665ca6 448 SUPERFAMILY SSF55957 359 446 1.44E-19 T 14-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PhaeoP54_00626 cc3e4ae2d6b0d9a78510756df3665ca6 448 Gene3D G3DSA:3.40.120.10 257 340 5.7E-64 T 14-10-2018 PhaeoP54_00626 cc3e4ae2d6b0d9a78510756df3665ca6 448 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 1 445 45.497 T 14-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PhaeoP54_00626 cc3e4ae2d6b0d9a78510756df3665ca6 448 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 3 136 1.6E-43 T 14-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PhaeoP54_00626 cc3e4ae2d6b0d9a78510756df3665ca6 448 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 5 443 3.7E-180 T 14-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PhaeoP54_00626 cc3e4ae2d6b0d9a78510756df3665ca6 448 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 374 442 5.6E-11 T 14-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PhaeoP54_00626 cc3e4ae2d6b0d9a78510756df3665ca6 448 SUPERFAMILY SSF53738 258 366 1.1E-30 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PhaeoP54_01302 bb5ec45a85e6fbe6c50a484e4a386236 343 Gene3D G3DSA:3.40.50.2300 166 340 1.2E-52 T 14-10-2018 PhaeoP54_01302 bb5ec45a85e6fbe6c50a484e4a386236 343 Gene3D G3DSA:1.10.260.40 4 62 3.2E-10 T 14-10-2018 PhaeoP54_01302 bb5ec45a85e6fbe6c50a484e4a386236 343 SMART SM00354 8 76 4.6E-8 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 PhaeoP54_01302 bb5ec45a85e6fbe6c50a484e4a386236 343 Gene3D G3DSA:3.40.50.2300 67 335 1.2E-52 T 14-10-2018 PhaeoP54_01302 bb5ec45a85e6fbe6c50a484e4a386236 343 SUPERFAMILY SSF53822 64 340 5.57E-45 T 14-10-2018 IPR028082 Periplasmic binding protein-like I PhaeoP54_01302 bb5ec45a85e6fbe6c50a484e4a386236 343 Pfam PF13377 Periplasmic binding protein-like domain 191 342 2.4E-18 T 14-10-2018 PhaeoP54_01302 bb5ec45a85e6fbe6c50a484e4a386236 343 SUPERFAMILY SSF47413 6 58 9.01E-11 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 PhaeoP54_01302 bb5ec45a85e6fbe6c50a484e4a386236 343 Pfam PF00356 Bacterial regulatory proteins, lacI family 9 53 4.4E-9 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 PhaeoP54_02111 7d1d71b7beb585c30485bd7b0b23be4c 495 ProSitePatterns PS00571 Amidases signature. 156 187 - T 14-10-2018 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921|Reactome: R-HSA-2142753 PhaeoP54_02111 7d1d71b7beb585c30485bd7b0b23be4c 495 TIGRFAM TIGR00132 gatA: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit 14 484 9.7E-165 T 14-10-2018 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412|GO:0030956|GO:0050567 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 PhaeoP54_02111 7d1d71b7beb585c30485bd7b0b23be4c 495 SUPERFAMILY SSF75304 2 484 5.36E-154 T 14-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 PhaeoP54_02111 7d1d71b7beb585c30485bd7b0b23be4c 495 Pfam PF01425 Amidase 25 475 1.0E-143 T 14-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 PhaeoP54_02111 7d1d71b7beb585c30485bd7b0b23be4c 495 Gene3D G3DSA:3.90.1300.10 3 492 2.8E-181 T 14-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 PhaeoP54_02111 7d1d71b7beb585c30485bd7b0b23be4c 495 Hamap MF_00120 Glutamyl-tRNA(Gln) amidotransferase subunit A [gatA]. 12 486 89.715 T 14-10-2018 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412|GO:0030956|GO:0050567 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 PhaeoP54_00696 72b7ced0854ed5ee60f72729dd7d1c91 261 SUPERFAMILY SSF52540 6 235 1.71E-55 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_00696 72b7ced0854ed5ee60f72729dd7d1c91 261 SMART SM00382 32 228 2.3E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_00696 72b7ced0854ed5ee60f72729dd7d1c91 261 Pfam PF00005 ABC transporter 24 177 1.3E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PhaeoP54_00696 72b7ced0854ed5ee60f72729dd7d1c91 261 Gene3D G3DSA:3.40.50.300 1 250 3.9E-51 T 14-10-2018 PhaeoP54_02795 ade59d84c9489ef66409af014d32fc23 138 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 2 125 5.8E-7 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain PhaeoP54_02795 ade59d84c9489ef66409af014d32fc23 138 Gene3D G3DSA:3.10.180.10 1 129 3.4E-31 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PhaeoP54_02795 ade59d84c9489ef66409af014d32fc23 138 SUPERFAMILY SSF54593 2 132 4.26E-20 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PhaeoP54_01127 b912a1f8815b9dd1b31dbd4e6866da23 313 ProSitePatterns PS01247 Inosine-uridine preferring nucleoside hydrolase family signature. 9 19 - T 14-10-2018 IPR015910 Inosine/uridine-preferring nucleoside hydrolase, conserved site GO:0016799 PhaeoP54_01127 b912a1f8815b9dd1b31dbd4e6866da23 313 SUPERFAMILY SSF53590 4 310 1.14E-107 T 14-10-2018 IPR036452 Ribonucleoside hydrolase-like PhaeoP54_01127 b912a1f8815b9dd1b31dbd4e6866da23 313 Pfam PF01156 Inosine-uridine preferring nucleoside hydrolase 4 304 6.9E-94 T 14-10-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain PhaeoP54_01127 b912a1f8815b9dd1b31dbd4e6866da23 313 Gene3D G3DSA:3.90.245.10 1 313 2.2E-117 T 14-10-2018 IPR036452 Ribonucleoside hydrolase-like PhaeoP54_00807 97edbffcc27752f004d5df4535720f74 347 Pfam PF00248 Aldo/keto reductase family 16 339 1.6E-60 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain PhaeoP54_00807 97edbffcc27752f004d5df4535720f74 347 SUPERFAMILY SSF51430 1 346 2.62E-92 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily PhaeoP54_00807 97edbffcc27752f004d5df4535720f74 347 Gene3D G3DSA:3.20.20.100 1 347 4.5E-108 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily PhaeoP54_00534 4d26614a5191bdd2963238c0b1a3c06d 154 Gene3D G3DSA:3.30.1130.10 19 137 4.8E-40 T 14-10-2018 PhaeoP54_00534 4d26614a5191bdd2963238c0b1a3c06d 154 PIRSF PIRSF027377 5 137 2.3E-50 T 14-10-2018 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 PhaeoP54_00534 4d26614a5191bdd2963238c0b1a3c06d 154 TIGRFAM TIGR03139 QueF-II: 7-cyano-7-deazaguanine reductase 25 132 3.7E-44 T 14-10-2018 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 PhaeoP54_00534 4d26614a5191bdd2963238c0b1a3c06d 154 Pfam PF14489 QueF-like protein 58 134 4.4E-32 T 14-10-2018 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 PhaeoP54_00534 4d26614a5191bdd2963238c0b1a3c06d 154 SUPERFAMILY SSF55620 25 144 2.08E-26 T 14-10-2018 PhaeoP54_00534 4d26614a5191bdd2963238c0b1a3c06d 154 Hamap MF_00818 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 154 69.015 T 14-10-2018 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 PhaeoP54_00764 7000c59845afbb0fbb979881a1d04855 273 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 12 264 1.3E-77 T 14-10-2018 IPR015991 Uncharacterised hydrolase TatD-type GO:0004536 PhaeoP54_00764 7000c59845afbb0fbb979881a1d04855 273 Gene3D G3DSA:3.20.20.140 6 267 4.5E-84 T 14-10-2018 PhaeoP54_00764 7000c59845afbb0fbb979881a1d04855 273 PIRSF PIRSF005902 1 268 6.9E-74 T 14-10-2018 IPR001130 TatD family GO:0016788 PhaeoP54_00764 7000c59845afbb0fbb979881a1d04855 273 SUPERFAMILY SSF51556 12 263 7.16E-84 T 14-10-2018 IPR032466 Metal-dependent hydrolase PhaeoP54_00764 7000c59845afbb0fbb979881a1d04855 273 ProSitePatterns PS01090 TatD deoxyribonuclease family signature 2. 134 144 - T 14-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 PhaeoP54_00764 7000c59845afbb0fbb979881a1d04855 273 Pfam PF01026 TatD related DNase 13 263 5.4E-72 T 14-10-2018 IPR001130 TatD family GO:0016788 PhaeoP54_01760 4ac554564a36a1ed7712d794b20a8bfe 244 Gene3D G3DSA:2.60.120.10 30 149 3.6E-21 T 14-10-2018 IPR014710 RmlC-like jelly roll fold PhaeoP54_01760 4ac554564a36a1ed7712d794b20a8bfe 244 Pfam PF00027 Cyclic nucleotide-binding domain 34 118 5.2E-11 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain PhaeoP54_01760 4ac554564a36a1ed7712d794b20a8bfe 244 SMART SM00100 15 159 4.6E-7 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain PhaeoP54_01760 4ac554564a36a1ed7712d794b20a8bfe 244 SUPERFAMILY SSF51206 9 147 3.27E-18 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like PhaeoP54_01760 4ac554564a36a1ed7712d794b20a8bfe 244 SUPERFAMILY SSF46785 150 229 3.79E-14 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_01760 4ac554564a36a1ed7712d794b20a8bfe 244 Pfam PF13545 Crp-like helix-turn-helix domain 153 225 5.1E-12 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 PhaeoP54_01760 4ac554564a36a1ed7712d794b20a8bfe 244 Gene3D G3DSA:1.10.10.10 150 231 1.6E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_02379 310b7869c360502d6f0e14b02ad702ad 236 Pfam PF09929 Putative PD-(D/E)XK phosphodiesterase (DUF2161) 102 211 1.1E-42 T 14-10-2018 IPR018679 Putative PD-(D/E)XK phosphodiesterase (DUF2161) PhaeoP54_02842 a9815843fc9c82b2052cef3350b74891 184 Gene3D G3DSA:1.10.260.40 3 73 5.3E-17 T 14-10-2018 PhaeoP54_02842 a9815843fc9c82b2052cef3350b74891 184 Pfam PF01381 Helix-turn-helix 10 62 1.1E-14 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PhaeoP54_02842 a9815843fc9c82b2052cef3350b74891 184 SUPERFAMILY SSF47413 7 69 9.65E-16 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 PhaeoP54_02842 a9815843fc9c82b2052cef3350b74891 184 Pfam PF07883 Cupin domain 106 164 8.1E-10 T 14-10-2018 IPR013096 Cupin 2, conserved barrel PhaeoP54_02842 a9815843fc9c82b2052cef3350b74891 184 Gene3D G3DSA:2.60.120.10 88 183 1.5E-23 T 14-10-2018 IPR014710 RmlC-like jelly roll fold PhaeoP54_02842 a9815843fc9c82b2052cef3350b74891 184 SUPERFAMILY SSF51182 49 177 1.21E-18 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily PhaeoP54_02842 a9815843fc9c82b2052cef3350b74891 184 SMART SM00530 9 64 2.6E-14 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PhaeoP54_01797 0794006f96f32dddf7f4573d683b4441 205 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 47 5.4E-22 T 14-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PhaeoP54_01797 0794006f96f32dddf7f4573d683b4441 205 SUPERFAMILY SSF55653 57 146 1.2E-25 T 14-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily PhaeoP54_01797 0794006f96f32dddf7f4573d683b4441 205 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 14-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PhaeoP54_01797 0794006f96f32dddf7f4573d683b4441 205 Pfam PF03948 Ribosomal protein L9, C-terminal domain 63 145 4.0E-24 T 14-10-2018 IPR020069 Ribosomal protein L9, C-terminal PhaeoP54_01797 0794006f96f32dddf7f4573d683b4441 205 Gene3D G3DSA:3.10.430.100 60 147 2.5E-24 T 14-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily PhaeoP54_01797 0794006f96f32dddf7f4573d683b4441 205 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 147 25.353 T 14-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 PhaeoP54_01797 0794006f96f32dddf7f4573d683b4441 205 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 145 2.1E-40 T 14-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 PhaeoP54_01797 0794006f96f32dddf7f4573d683b4441 205 SUPERFAMILY SSF55658 1 57 8.2E-19 T 14-10-2018 IPR009027 Ribosomal protein L9/RNase H1, N-terminal PhaeoP54_01797 0794006f96f32dddf7f4573d683b4441 205 Gene3D G3DSA:3.40.5.10 1 50 7.3E-23 T 14-10-2018 IPR036935 Ribosomal protein L9, N-terminal domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PhaeoP54_03104 349df27d87d376a68311e3c323642aef 207 Pfam PF03458 UPF0126 domain 6 80 1.4E-19 T 14-10-2018 IPR005115 Uncharacterised domain UPF0126 PhaeoP54_03104 349df27d87d376a68311e3c323642aef 207 Pfam PF03458 UPF0126 domain 92 164 2.9E-15 T 14-10-2018 IPR005115 Uncharacterised domain UPF0126 PhaeoP54_03019 d9d4c39f83f0fb4bf2be930c70642590 187 SUPERFAMILY SSF55282 8 186 2.83E-69 T 14-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PhaeoP54_03019 d9d4c39f83f0fb4bf2be930c70642590 187 Pfam PF00673 ribosomal L5P family C-terminus 92 185 3.6E-39 T 14-10-2018 IPR031309 Ribosomal protein L5, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PhaeoP54_03019 d9d4c39f83f0fb4bf2be930c70642590 187 ProSitePatterns PS00358 Ribosomal protein L5 signature. 65 81 - T 14-10-2018 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PhaeoP54_03019 d9d4c39f83f0fb4bf2be930c70642590 187 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 8 187 39.804 T 14-10-2018 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 PhaeoP54_03019 d9d4c39f83f0fb4bf2be930c70642590 187 PIRSF PIRSF002161 4 187 2.6E-60 T 14-10-2018 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PhaeoP54_03019 d9d4c39f83f0fb4bf2be930c70642590 187 Gene3D G3DSA:3.30.1440.10 6 187 2.9E-73 T 14-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PhaeoP54_03019 d9d4c39f83f0fb4bf2be930c70642590 187 Pfam PF00281 Ribosomal protein L5 31 88 3.5E-19 T 14-10-2018 IPR031310 Ribosomal protein L5, N-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PhaeoP54_00103 3efb19088db566e8eddbfa12baa0df38 306 SUPERFAMILY SSF51735 5 303 5.8E-81 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PhaeoP54_00103 3efb19088db566e8eddbfa12baa0df38 306 Gene3D G3DSA:3.40.50.720 120 286 2.6E-64 T 14-10-2018 PhaeoP54_00103 3efb19088db566e8eddbfa12baa0df38 306 Gene3D G3DSA:3.30.1780.10 39 300 2.6E-64 T 14-10-2018 IPR023401 Ornithine cyclodeaminase, N-terminal Reactome: R-HSA-71064 PhaeoP54_00103 3efb19088db566e8eddbfa12baa0df38 306 PIRSF PIRSF001439 28 305 7.0E-52 T 14-10-2018 IPR003462 Ornithine cyclodeaminase/mu-crystallin Reactome: R-HSA-71064 PhaeoP54_00103 3efb19088db566e8eddbfa12baa0df38 306 Pfam PF02423 Ornithine cyclodeaminase/mu-crystallin family 59 304 2.5E-46 T 14-10-2018 IPR003462 Ornithine cyclodeaminase/mu-crystallin Reactome: R-HSA-71064 PhaeoP54_01861 b588c471a733fbba36a9e6d788b5cd24 57 Pfam PF07043 Protein of unknown function (DUF1328) 6 44 2.2E-17 T 14-10-2018 IPR009760 Protein of unknown function DUF1328 GO:0005886 PhaeoP54_01861 b588c471a733fbba36a9e6d788b5cd24 57 Hamap MF_01361 UPF0391 membrane protein YtjA [ytjA]. 1 51 21.576 T 14-10-2018 IPR009760 Protein of unknown function DUF1328 GO:0005886 PhaeoP54_01861 b588c471a733fbba36a9e6d788b5cd24 57 PIRSF PIRSF036466 1 55 2.3E-23 T 14-10-2018 IPR009760 Protein of unknown function DUF1328 GO:0005886 PhaeoP54_03712 401693cdfba66847a5565d55fe4bdc58 312 Gene3D G3DSA:3.40.190.10 166 271 2.4E-38 T 14-10-2018 PhaeoP54_03712 401693cdfba66847a5565d55fe4bdc58 312 Pfam PF03466 LysR substrate binding domain 91 295 3.0E-32 T 14-10-2018 IPR005119 LysR, substrate-binding PhaeoP54_03712 401693cdfba66847a5565d55fe4bdc58 312 Gene3D G3DSA:3.40.190.10 95 294 2.4E-38 T 14-10-2018 PhaeoP54_03712 401693cdfba66847a5565d55fe4bdc58 312 Gene3D G3DSA:1.10.10.10 2 86 6.1E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_03712 401693cdfba66847a5565d55fe4bdc58 312 SUPERFAMILY SSF46785 3 113 1.43E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_03712 401693cdfba66847a5565d55fe4bdc58 312 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 66 1.0E-12 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PhaeoP54_03712 401693cdfba66847a5565d55fe4bdc58 312 SUPERFAMILY SSF53850 92 298 4.08E-31 T 14-10-2018 PhaeoP54_02418 c1304cce24c80b2edd3a2b45013bfb93 199 Pfam PF02630 SCO1/SenC 51 181 6.7E-12 T 14-10-2018 IPR003782 Copper chaperone SCO1/SenC Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PhaeoP54_02418 c1304cce24c80b2edd3a2b45013bfb93 199 Gene3D G3DSA:3.40.30.10 44 198 9.3E-31 T 14-10-2018 PhaeoP54_02418 c1304cce24c80b2edd3a2b45013bfb93 199 SUPERFAMILY SSF52833 43 186 1.57E-27 T 14-10-2018 IPR036249 Thioredoxin-like superfamily PhaeoP54_02343 3388ca083e3d74dacfbebe423fc15e81 435 PIRSF PIRSF000412 15 431 1.3E-104 T 14-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 PhaeoP54_02343 3388ca083e3d74dacfbebe423fc15e81 435 Gene3D G3DSA:3.40.640.10 59 310 1.7E-84 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PhaeoP54_02343 3388ca083e3d74dacfbebe423fc15e81 435 SUPERFAMILY SSF53383 44 414 7.74E-91 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PhaeoP54_02343 3388ca083e3d74dacfbebe423fc15e81 435 Pfam PF00464 Serine hydroxymethyltransferase 49 408 1.5E-40 T 14-10-2018 IPR039429 Serine hydroxymethyltransferase-like domain KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 PhaeoP54_02343 3388ca083e3d74dacfbebe423fc15e81 435 Gene3D G3DSA:3.90.1150.10 48 412 1.7E-84 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 PhaeoP54_03747 ed61863a1cdd5d3a7176a3d1e18ba81c 185 Pfam PF12802 MarR family 27 86 6.5E-9 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PhaeoP54_03747 ed61863a1cdd5d3a7176a3d1e18ba81c 185 PRINTS PR00598 Bacterial regulatory protein MarR family signature 63 78 3.0E-5 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PhaeoP54_03747 ed61863a1cdd5d3a7176a3d1e18ba81c 185 PRINTS PR00598 Bacterial regulatory protein MarR family signature 46 62 3.0E-5 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PhaeoP54_03747 ed61863a1cdd5d3a7176a3d1e18ba81c 185 PRINTS PR00598 Bacterial regulatory protein MarR family signature 82 98 3.0E-5 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PhaeoP54_03747 ed61863a1cdd5d3a7176a3d1e18ba81c 185 Gene3D G3DSA:1.10.10.10 4 134 8.6E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_03747 ed61863a1cdd5d3a7176a3d1e18ba81c 185 ProSitePatterns PS01117 MarR-type HTH domain signature. 61 95 - T 14-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site PhaeoP54_03747 ed61863a1cdd5d3a7176a3d1e18ba81c 185 SMART SM00347 16 121 9.3E-5 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PhaeoP54_03747 ed61863a1cdd5d3a7176a3d1e18ba81c 185 SUPERFAMILY SSF46785 22 115 1.18E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_02525 ec1fdeb282af2f5992397fc01d6c9cf3 204 SUPERFAMILY SSF52374 11 195 2.28E-43 T 14-10-2018 PhaeoP54_02525 ec1fdeb282af2f5992397fc01d6c9cf3 204 Gene3D G3DSA:3.40.50.620 12 201 1.2E-43 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PhaeoP54_02525 ec1fdeb282af2f5992397fc01d6c9cf3 204 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 12 199 20.116 T 14-10-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 PhaeoP54_02525 ec1fdeb282af2f5992397fc01d6c9cf3 204 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 14 72 2.6E-7 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 PhaeoP54_02525 ec1fdeb282af2f5992397fc01d6c9cf3 204 Pfam PF01467 Cytidylyltransferase-like 16 195 3.1E-22 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 PhaeoP54_02525 ec1fdeb282af2f5992397fc01d6c9cf3 204 TIGRFAM TIGR00482 TIGR00482: nicotinate (nicotinamide) nucleotide adenylyltransferase 16 195 5.6E-36 T 14-10-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 PhaeoP54_02208 6433b47bcef86cd4e5866c0ef8d89120 263 Pfam PF08220 DeoR-like helix-turn-helix domain 6 57 3.0E-8 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 PhaeoP54_02208 6433b47bcef86cd4e5866c0ef8d89120 263 SMART SM01134 70 234 5.5E-31 T 14-10-2018 PhaeoP54_02208 6433b47bcef86cd4e5866c0ef8d89120 263 SMART SM00420 6 56 9.9E-4 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 PhaeoP54_02208 6433b47bcef86cd4e5866c0ef8d89120 263 Gene3D G3DSA:3.30.750.70 66 147 2.2E-5 T 14-10-2018 PhaeoP54_02208 6433b47bcef86cd4e5866c0ef8d89120 263 Pfam PF00455 DeoR C terminal sensor domain 72 233 2.3E-33 T 14-10-2018 IPR014036 DeoR C-terminal sensor domain PhaeoP54_02208 6433b47bcef86cd4e5866c0ef8d89120 263 SUPERFAMILY SSF46785 5 49 1.21E-6 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_02208 6433b47bcef86cd4e5866c0ef8d89120 263 SUPERFAMILY SSF100950 71 221 4.4E-21 T 14-10-2018 IPR037171 NagB/RpiA transferase-like PhaeoP54_02830 89da227a7b5cb32214189508920deffa 576 SUPERFAMILY SSF52540 325 558 7.14E-64 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_02830 89da227a7b5cb32214189508920deffa 576 Gene3D G3DSA:1.20.1560.10 12 320 3.0E-34 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 PhaeoP54_02830 89da227a7b5cb32214189508920deffa 576 ProSitePatterns PS00211 ABC transporters family signature. 471 485 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PhaeoP54_02830 89da227a7b5cb32214189508920deffa 576 SUPERFAMILY SSF90123 14 320 1.96E-43 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 PhaeoP54_02830 89da227a7b5cb32214189508920deffa 576 TIGRFAM TIGR01842 type_I_sec_PrtD: type I secretion system ATPase 21 559 1.1E-201 T 14-10-2018 IPR010128 ATPase, type I secretion system, PrtD GO:0005524|GO:0008565|GO:0016021|GO:0030253|GO:0030256 PhaeoP54_02830 89da227a7b5cb32214189508920deffa 576 SMART SM00382 359 543 3.5E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_02830 89da227a7b5cb32214189508920deffa 576 Gene3D G3DSA:3.40.50.300 321 569 2.2E-68 T 14-10-2018 PhaeoP54_02830 89da227a7b5cb32214189508920deffa 576 Pfam PF00005 ABC transporter 350 498 7.2E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PhaeoP54_02830 89da227a7b5cb32214189508920deffa 576 Pfam PF00664 ABC transporter transmembrane region 28 282 1.2E-10 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 PhaeoP54_03739 e9845e92bd73e3fc6b0cf8cbb03b2ab6 229 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 177 193 3.7E-6 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 PhaeoP54_03739 e9845e92bd73e3fc6b0cf8cbb03b2ab6 229 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 193 208 3.7E-6 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 PhaeoP54_03739 e9845e92bd73e3fc6b0cf8cbb03b2ab6 229 SUPERFAMILY SSF46785 150 224 1.14E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_03739 e9845e92bd73e3fc6b0cf8cbb03b2ab6 229 Pfam PF13545 Crp-like helix-turn-helix domain 152 224 6.0E-17 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 PhaeoP54_03739 e9845e92bd73e3fc6b0cf8cbb03b2ab6 229 Gene3D G3DSA:1.10.10.10 148 229 1.8E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_03739 e9845e92bd73e3fc6b0cf8cbb03b2ab6 229 Gene3D G3DSA:2.60.120.10 1 147 2.6E-28 T 14-10-2018 IPR014710 RmlC-like jelly roll fold PhaeoP54_03739 e9845e92bd73e3fc6b0cf8cbb03b2ab6 229 SMART SM00419 171 219 3.0E-13 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 PhaeoP54_03739 e9845e92bd73e3fc6b0cf8cbb03b2ab6 229 SUPERFAMILY SSF51206 8 147 9.43E-30 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like PhaeoP54_03739 e9845e92bd73e3fc6b0cf8cbb03b2ab6 229 Pfam PF00027 Cyclic nucleotide-binding domain 36 117 4.5E-16 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain PhaeoP54_03739 e9845e92bd73e3fc6b0cf8cbb03b2ab6 229 SMART SM00100 14 132 7.1E-16 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain PhaeoP54_02215 8b096c6536ea1d33641ac931fe2592c9 152 SMART SM00347 30 131 1.4E-15 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PhaeoP54_02215 8b096c6536ea1d33641ac931fe2592c9 152 SUPERFAMILY SSF46785 8 146 1.18E-29 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_02215 8b096c6536ea1d33641ac931fe2592c9 152 Gene3D G3DSA:1.10.10.10 1 149 6.4E-36 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_02215 8b096c6536ea1d33641ac931fe2592c9 152 PRINTS PR00598 Bacterial regulatory protein MarR family signature 55 71 3.1E-7 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PhaeoP54_02215 8b096c6536ea1d33641ac931fe2592c9 152 PRINTS PR00598 Bacterial regulatory protein MarR family signature 91 107 3.1E-7 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PhaeoP54_02215 8b096c6536ea1d33641ac931fe2592c9 152 PRINTS PR00598 Bacterial regulatory protein MarR family signature 72 87 3.1E-7 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PhaeoP54_02215 8b096c6536ea1d33641ac931fe2592c9 152 Pfam PF01047 MarR family 38 95 4.9E-10 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PhaeoP54_02215 8b096c6536ea1d33641ac931fe2592c9 152 ProSitePatterns PS01117 MarR-type HTH domain signature. 70 104 - T 14-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site PhaeoP54_00250 a4013d88f372f9cfa567a64574bd8471 447 Pfam PF13180 PDZ domain 100 179 7.8E-13 T 14-10-2018 IPR001478 PDZ domain GO:0005515 PhaeoP54_00250 a4013d88f372f9cfa567a64574bd8471 447 Gene3D G3DSA:2.30.42.10 100 187 4.8E-94 T 14-10-2018 PhaeoP54_00250 a4013d88f372f9cfa567a64574bd8471 447 SUPERFAMILY SSF52096 33 370 3.31E-82 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily PhaeoP54_00250 a4013d88f372f9cfa567a64574bd8471 447 Pfam PF03572 Peptidase family S41 200 365 4.4E-54 T 14-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 PhaeoP54_00250 a4013d88f372f9cfa567a64574bd8471 447 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 58 380 2.5E-104 T 14-10-2018 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 PhaeoP54_00250 a4013d88f372f9cfa567a64574bd8471 447 SUPERFAMILY SSF50156 71 193 3.33E-24 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 PhaeoP54_00250 a4013d88f372f9cfa567a64574bd8471 447 SMART SM00245 173 366 5.0E-75 T 14-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 PhaeoP54_00250 a4013d88f372f9cfa567a64574bd8471 447 SMART SM00228 100 171 2.9E-15 T 14-10-2018 IPR001478 PDZ domain GO:0005515 PhaeoP54_00250 a4013d88f372f9cfa567a64574bd8471 447 Gene3D G3DSA:3.90.226.10 188 363 4.8E-94 T 14-10-2018 PhaeoP54_00250 a4013d88f372f9cfa567a64574bd8471 447 Gene3D G3DSA:3.30.750.44 42 341 4.8E-94 T 14-10-2018 PhaeoP54_00976 37e3ef6aa8a1ab3660945da5175d0cba 122 SMART SM00422 1 70 2.5E-15 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PhaeoP54_00976 37e3ef6aa8a1ab3660945da5175d0cba 122 ProSitePatterns PS00552 MerR-type HTH domain signature. 4 26 - T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PhaeoP54_00976 37e3ef6aa8a1ab3660945da5175d0cba 122 SUPERFAMILY SSF46955 1 115 4.4E-27 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily PhaeoP54_00976 37e3ef6aa8a1ab3660945da5175d0cba 122 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 1.6E-6 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PhaeoP54_00976 37e3ef6aa8a1ab3660945da5175d0cba 122 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 1.6E-6 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PhaeoP54_00976 37e3ef6aa8a1ab3660945da5175d0cba 122 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 1.6E-6 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PhaeoP54_00976 37e3ef6aa8a1ab3660945da5175d0cba 122 Pfam PF00376 MerR family regulatory protein 2 39 2.6E-15 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PhaeoP54_00976 37e3ef6aa8a1ab3660945da5175d0cba 122 Gene3D G3DSA:1.10.1660.10 1 121 3.9E-28 T 14-10-2018 PhaeoP54_02592 d54305ef5f4c659f99d3f3169a14a470 522 Pfam PF00005 ABC transporter 32 180 9.7E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PhaeoP54_02592 d54305ef5f4c659f99d3f3169a14a470 522 Pfam PF00005 ABC transporter 283 437 2.1E-12 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PhaeoP54_02592 d54305ef5f4c659f99d3f3169a14a470 522 ProSitePatterns PS00211 ABC transporters family signature. 411 425 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PhaeoP54_02592 d54305ef5f4c659f99d3f3169a14a470 522 SMART SM00382 40 228 4.8E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_02592 d54305ef5f4c659f99d3f3169a14a470 522 SUPERFAMILY SSF52540 14 237 8.29E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_02592 d54305ef5f4c659f99d3f3169a14a470 522 Gene3D G3DSA:3.40.50.300 10 248 3.7E-58 T 14-10-2018 PhaeoP54_02592 d54305ef5f4c659f99d3f3169a14a470 522 Gene3D G3DSA:3.40.50.300 255 500 3.1E-32 T 14-10-2018 PhaeoP54_02592 d54305ef5f4c659f99d3f3169a14a470 522 SUPERFAMILY SSF52540 259 488 5.53E-36 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_01351 810faed578fba579b03f21aad62a2212 291 Gene3D G3DSA:3.40.47.10 36 177 1.8E-6 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 PhaeoP54_01351 810faed578fba579b03f21aad62a2212 291 SUPERFAMILY SSF53901 71 182 6.84E-8 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 PhaeoP54_00878 44f847751466aa233fbfcfc1ceaa7d9e 324 SUPERFAMILY SSF54373 181 270 3.66E-20 T 14-10-2018 PhaeoP54_00878 44f847751466aa233fbfcfc1ceaa7d9e 324 SUPERFAMILY SSF51971 2 310 4.47E-28 T 14-10-2018 PhaeoP54_00878 44f847751466aa233fbfcfc1ceaa7d9e 324 Pfam PF01266 FAD dependent oxidoreductase 2 308 6.4E-41 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 PhaeoP54_00878 44f847751466aa233fbfcfc1ceaa7d9e 324 TIGRFAM TIGR02352 thiamin_ThiO: glycine oxidase ThiO 2 310 2.6E-75 T 14-10-2018 IPR012727 Glycine oxidase ThiO GO:0016491|GO:0050660 KEGG: 00730+1.4.3.19|MetaCyc: PWY-7396|MetaCyc: PWY-7806 PhaeoP54_00878 44f847751466aa233fbfcfc1ceaa7d9e 324 Gene3D G3DSA:3.30.9.10 79 131 1.6E-25 T 14-10-2018 PhaeoP54_00878 44f847751466aa233fbfcfc1ceaa7d9e 324 Gene3D G3DSA:3.30.9.10 181 271 1.2E-23 T 14-10-2018 PhaeoP54_00878 44f847751466aa233fbfcfc1ceaa7d9e 324 Gene3D G3DSA:3.50.50.60 179 307 1.2E-23 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PhaeoP54_00878 44f847751466aa233fbfcfc1ceaa7d9e 324 Gene3D G3DSA:3.50.50.60 3 161 1.6E-25 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PhaeoP54_02351 b92752f05e146902da0cc1960b7b18ac 199 SUPERFAMILY SSF57716 142 193 1.47E-16 T 14-10-2018 PhaeoP54_02351 b92752f05e146902da0cc1960b7b18ac 199 Pfam PF00265 Thymidine kinase 2 186 5.5E-49 T 14-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 PhaeoP54_02351 b92752f05e146902da0cc1960b7b18ac 199 Gene3D G3DSA:3.40.50.300 1 140 4.1E-23 T 14-10-2018 PhaeoP54_02351 b92752f05e146902da0cc1960b7b18ac 199 ProSitePatterns PS00603 Thymidine kinase cellular-type signature. 173 186 - T 14-10-2018 IPR020633 Thymidine kinase, conserved site GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 PhaeoP54_02351 b92752f05e146902da0cc1960b7b18ac 199 PIRSF PIRSF035805 1 198 2.2E-53 T 14-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 PhaeoP54_02351 b92752f05e146902da0cc1960b7b18ac 199 Gene3D G3DSA:3.30.60.20 143 187 6.8E-7 T 14-10-2018 PhaeoP54_02351 b92752f05e146902da0cc1960b7b18ac 199 SUPERFAMILY SSF52540 1 140 3.94E-38 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_02351 b92752f05e146902da0cc1960b7b18ac 199 Hamap MF_00124 Thymidine kinase [tdk]. 1 189 33.62 T 14-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 PhaeoP54_00344 3dfddee809735a2925707e50801a8fc3 127 SUPERFAMILY SSF81343 1 125 9.81E-33 T 14-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 PhaeoP54_00344 3dfddee809735a2925707e50801a8fc3 127 ProSitePatterns PS01001 Succinate dehydrogenase cytochrome b subunit signature 2. 84 97 - T 14-10-2018 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 PhaeoP54_00344 3dfddee809735a2925707e50801a8fc3 127 TIGRFAM TIGR02970 succ_dehyd_cytB: succinate dehydrogenase, cytochrome b556 subunit 8 125 1.6E-35 T 14-10-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 PhaeoP54_00344 3dfddee809735a2925707e50801a8fc3 127 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 7 122 2.7E-27 T 14-10-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 PhaeoP54_00344 3dfddee809735a2925707e50801a8fc3 127 Gene3D G3DSA:1.20.1300.10 2 127 1.5E-38 T 14-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 PhaeoP54_00344 3dfddee809735a2925707e50801a8fc3 127 PIRSF PIRSF000178 1 127 1.3E-38 T 14-10-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 PhaeoP54_03995 e75f45d8ca28eff71978159cdbf73294 456 Gene3D G3DSA:1.10.1200.160 403 434 9.7E-49 T 14-10-2018 PhaeoP54_03995 e75f45d8ca28eff71978159cdbf73294 456 Gene3D G3DSA:2.40.128.260 282 453 9.7E-49 T 14-10-2018 PhaeoP54_03995 e75f45d8ca28eff71978159cdbf73294 456 Pfam PF03743 Bacterial conjugation TrbI-like protein 279 454 1.6E-49 T 14-10-2018 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI PhaeoP54_03932 09f6dbbf83ffaabbcc4504b31267a057 951 SUPERFAMILY SSF53383 17 441 2.45E-101 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PhaeoP54_03932 09f6dbbf83ffaabbcc4504b31267a057 951 SUPERFAMILY SSF53383 469 942 1.85E-98 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PhaeoP54_03932 09f6dbbf83ffaabbcc4504b31267a057 951 Gene3D G3DSA:3.40.640.10 96 355 1.6E-107 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PhaeoP54_03932 09f6dbbf83ffaabbcc4504b31267a057 951 Gene3D G3DSA:3.40.640.10 518 736 2.6E-59 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PhaeoP54_03932 09f6dbbf83ffaabbcc4504b31267a057 951 Pfam PF02347 Glycine cleavage system P-protein 472 729 7.0E-10 T 14-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 PhaeoP54_03932 09f6dbbf83ffaabbcc4504b31267a057 951 Pfam PF02347 Glycine cleavage system P-protein 16 440 6.6E-176 T 14-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 PhaeoP54_03932 09f6dbbf83ffaabbcc4504b31267a057 951 TIGRFAM TIGR00461 gcvP: glycine dehydrogenase 17 940 0.0 T 14-10-2018 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 PhaeoP54_03932 09f6dbbf83ffaabbcc4504b31267a057 951 Hamap MF_00711 Glycine dehydrogenase (decarboxylating) [gcvP]. 8 946 25.237 T 14-10-2018 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 PhaeoP54_03932 09f6dbbf83ffaabbcc4504b31267a057 951 Gene3D G3DSA:3.90.1150.10 756 892 1.8E-40 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 PhaeoP54_01745 77ec82ce5703456066bc594674f2af51 183 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 63 75 6.6E-15 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 PhaeoP54_01745 77ec82ce5703456066bc594674f2af51 183 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 127 139 6.6E-15 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 PhaeoP54_01745 77ec82ce5703456066bc594674f2af51 183 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 37 52 6.6E-15 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 PhaeoP54_01745 77ec82ce5703456066bc594674f2af51 183 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 140 155 6.6E-15 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 PhaeoP54_01745 77ec82ce5703456066bc594674f2af51 183 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 58 75 - T 14-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 PhaeoP54_01745 77ec82ce5703456066bc594674f2af51 183 Gene3D G3DSA:2.40.100.10 26 183 4.2E-43 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily PhaeoP54_01745 77ec82ce5703456066bc594674f2af51 183 PIRSF PIRSF001467 8 183 8.9E-31 T 14-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 PhaeoP54_01745 77ec82ce5703456066bc594674f2af51 183 SUPERFAMILY SSF50891 26 177 3.94E-44 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily PhaeoP54_01745 77ec82ce5703456066bc594674f2af51 183 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 30 177 2.4E-44 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 PhaeoP54_00377 85bb68e8ecb32c01ec732daf096b4e41 257 PIRSF PIRSF037834 2 257 3.6E-102 T 14-10-2018 IPR011882 1,2-phenylacetyl-CoA epoxidase, subunit C GO:0010124 PhaeoP54_00377 85bb68e8ecb32c01ec732daf096b4e41 257 Gene3D G3DSA:1.20.1260.10 3 257 4.0E-100 T 14-10-2018 IPR012347 Ferritin-like PhaeoP54_00377 85bb68e8ecb32c01ec732daf096b4e41 257 TIGRFAM TIGR02158 PA_CoA_Oxy3: phenylacetate-CoA oxygenase, PaaI subunit 18 257 6.3E-88 T 14-10-2018 IPR011882 1,2-phenylacetyl-CoA epoxidase, subunit C GO:0010124 PhaeoP54_00377 85bb68e8ecb32c01ec732daf096b4e41 257 Pfam PF05138 Phenylacetic acid catabolic protein 6 257 6.7E-98 T 14-10-2018 IPR007814 1,2-phenylacetyl-CoA epoxidase, subunit A/C GO:0010124 PhaeoP54_00377 85bb68e8ecb32c01ec732daf096b4e41 257 SUPERFAMILY SSF47240 9 251 1.78E-84 T 14-10-2018 IPR009078 Ferritin-like superfamily PhaeoP54_03017 821106f75cbe26abdbdd66d916776a55 130 Gene3D G3DSA:3.30.1370.30 1 72 1.4E-24 T 14-10-2018 PhaeoP54_03017 821106f75cbe26abdbdd66d916776a55 130 SUPERFAMILY SSF56047 1 130 2.09E-44 T 14-10-2018 IPR035987 Ribosomal protein S8 superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PhaeoP54_03017 821106f75cbe26abdbdd66d916776a55 130 ProSitePatterns PS00053 Ribosomal protein S8 signature. 100 117 - T 14-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PhaeoP54_03017 821106f75cbe26abdbdd66d916776a55 130 Gene3D G3DSA:3.30.1490.10 73 129 9.3E-26 T 14-10-2018 PhaeoP54_03017 821106f75cbe26abdbdd66d916776a55 130 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 1 130 28.609 T 14-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PhaeoP54_03017 821106f75cbe26abdbdd66d916776a55 130 Pfam PF00410 Ribosomal protein S8 3 130 1.4E-47 T 14-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PhaeoP54_00553 05b4847edf91557e1080807b78a8bfb0 290 PIRSF PIRSF000401 56 290 1.2E-53 T 14-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 PhaeoP54_00553 05b4847edf91557e1080807b78a8bfb0 290 Gene3D G3DSA:3.40.50.150 72 289 1.1E-47 T 14-10-2018 PhaeoP54_00553 05b4847edf91557e1080807b78a8bfb0 290 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 4 288 26.795 T 14-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 PhaeoP54_00553 05b4847edf91557e1080807b78a8bfb0 290 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 66 288 1.1E-55 T 14-10-2018 PhaeoP54_00553 05b4847edf91557e1080807b78a8bfb0 290 SUPERFAMILY SSF53335 40 287 1.28E-37 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PhaeoP54_03974 956f25eace5e3762d06194fb9f112b40 822 Gene3D G3DSA:3.40.50.300 1 461 2.3E-180 T 14-10-2018 PhaeoP54_03974 956f25eace5e3762d06194fb9f112b40 822 SUPERFAMILY SSF52540 489 796 5.53E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_03974 956f25eace5e3762d06194fb9f112b40 822 Gene3D G3DSA:3.40.50.300 485 820 1.1E-126 T 14-10-2018 PhaeoP54_03974 956f25eace5e3762d06194fb9f112b40 822 SUPERFAMILY SSF52540 3 441 1.92E-29 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_03974 956f25eace5e3762d06194fb9f112b40 822 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 120 809 1.3E-220 T 14-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 PhaeoP54_03974 956f25eace5e3762d06194fb9f112b40 822 Pfam PF00005 ABC transporter 492 744 2.4E-7 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PhaeoP54_03974 956f25eace5e3762d06194fb9f112b40 822 Gene3D G3DSA:1.20.1580.10 86 359 2.3E-180 T 14-10-2018 PhaeoP54_03974 956f25eace5e3762d06194fb9f112b40 822 ProSitePatterns PS00211 ABC transporters family signature. 714 728 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PhaeoP54_03974 956f25eace5e3762d06194fb9f112b40 822 Gene3D G3DSA:1.20.1580.10 598 755 1.1E-126 T 14-10-2018 PhaeoP54_03974 956f25eace5e3762d06194fb9f112b40 822 Gene3D G3DSA:1.10.8.280 144 268 2.3E-180 T 14-10-2018 PhaeoP54_00481 bca06908bf42e27658e8ab7b524e1602 319 SMART SM01130 5 301 2.5E-40 T 14-10-2018 IPR002220 DapA-like GO:0016829 PhaeoP54_00481 bca06908bf42e27658e8ab7b524e1602 319 SUPERFAMILY SSF51569 2 272 4.19E-50 T 14-10-2018 PhaeoP54_00481 bca06908bf42e27658e8ab7b524e1602 319 Gene3D G3DSA:3.20.20.70 1 319 3.1E-113 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PhaeoP54_00481 bca06908bf42e27658e8ab7b524e1602 319 PIRSF PIRSF001365 1 312 8.1E-57 T 14-10-2018 IPR002220 DapA-like GO:0016829 PhaeoP54_00481 bca06908bf42e27658e8ab7b524e1602 319 PRINTS PR00146 Dihydrodipicolinate synthase signature 131 148 5.1E-6 T 14-10-2018 IPR002220 DapA-like GO:0016829 PhaeoP54_00481 bca06908bf42e27658e8ab7b524e1602 319 PRINTS PR00146 Dihydrodipicolinate synthase signature 39 60 5.1E-6 T 14-10-2018 IPR002220 DapA-like GO:0016829 PhaeoP54_00481 bca06908bf42e27658e8ab7b524e1602 319 PRINTS PR00146 Dihydrodipicolinate synthase signature 72 90 5.1E-6 T 14-10-2018 IPR002220 DapA-like GO:0016829 PhaeoP54_00481 bca06908bf42e27658e8ab7b524e1602 319 Pfam PF00701 Dihydrodipicolinate synthetase family 6 235 8.0E-27 T 14-10-2018 IPR002220 DapA-like GO:0016829 PhaeoP54_03631 c4f3cb6787a675b34994c17ee9ca22ba 518 Gene3D G3DSA:2.130.10.130 234 428 2.4E-5 T 14-10-2018 IPR028994 Integrin alpha, N-terminal Reactome: R-HSA-216083 PhaeoP54_03631 c4f3cb6787a675b34994c17ee9ca22ba 518 Pfam PF07593 ASPIC and UnbV 449 515 7.7E-16 T 14-10-2018 IPR011519 ASPIC/UnbV PhaeoP54_03631 c4f3cb6787a675b34994c17ee9ca22ba 518 Pfam PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 343 415 5.4E-10 T 14-10-2018 PhaeoP54_03631 c4f3cb6787a675b34994c17ee9ca22ba 518 Pfam PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 55 120 7.7E-7 T 14-10-2018 PhaeoP54_03631 c4f3cb6787a675b34994c17ee9ca22ba 518 SUPERFAMILY SSF69318 33 441 1.96E-35 T 14-10-2018 PhaeoP54_01129 d30c87b3e0e689291542493c7246efdf 436 Gene3D G3DSA:3.50.50.60 40 392 6.5E-77 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PhaeoP54_01129 d30c87b3e0e689291542493c7246efdf 436 Pfam PF01266 FAD dependent oxidoreductase 40 389 1.3E-54 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 PhaeoP54_01129 d30c87b3e0e689291542493c7246efdf 436 Gene3D G3DSA:3.30.9.10 132 353 6.5E-77 T 14-10-2018 PhaeoP54_01129 d30c87b3e0e689291542493c7246efdf 436 SUPERFAMILY SSF51905 14 321 2.12E-48 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PhaeoP54_01645 48e6f59c8d9cbd6d7f0d00ad8f68f540 401 Gene3D G3DSA:3.90.1150.10 261 399 5.9E-53 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 PhaeoP54_01645 48e6f59c8d9cbd6d7f0d00ad8f68f540 401 TIGRFAM TIGR01328 met_gam_lyase: methionine gamma-lyase 7 393 5.3E-187 T 14-10-2018 IPR006237 L-methionine gamma-lyase GO:0018826 KEGG: 00270+4.4.1.11|KEGG: 00450+4.4.1.11|KEGG: 00920+4.4.1.2|MetaCyc: PWY-7793 PhaeoP54_01645 48e6f59c8d9cbd6d7f0d00ad8f68f540 401 Gene3D G3DSA:3.40.640.10 7 260 4.3E-99 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PhaeoP54_01645 48e6f59c8d9cbd6d7f0d00ad8f68f540 401 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 10 392 5.0E-144 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 PhaeoP54_01645 48e6f59c8d9cbd6d7f0d00ad8f68f540 401 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 201 215 - T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 PhaeoP54_01645 48e6f59c8d9cbd6d7f0d00ad8f68f540 401 SUPERFAMILY SSF53383 28 393 2.89E-123 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PhaeoP54_01645 48e6f59c8d9cbd6d7f0d00ad8f68f540 401 PIRSF PIRSF001434 1 396 1.1E-147 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 PhaeoP54_03141 b7b915b9ed6f80d07ed889849e49d6f9 213 Gene3D G3DSA:3.40.109.10 1 191 1.6E-40 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 PhaeoP54_03141 b7b915b9ed6f80d07ed889849e49d6f9 213 SUPERFAMILY SSF55469 9 204 9.68E-39 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 PhaeoP54_03141 b7b915b9ed6f80d07ed889849e49d6f9 213 Pfam PF00881 Nitroreductase family 21 186 1.0E-22 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 PhaeoP54_03141 b7b915b9ed6f80d07ed889849e49d6f9 213 TIGRFAM TIGR02476 BluB: 5,6-dimethylbenzimidazole synthase 8 207 6.5E-86 T 14-10-2018 IPR012825 5,6-dimethylbenzimidazole synthase BluB KEGG: 00740+1.13.11.79|MetaCyc: PWY-5523 PhaeoP54_01356 703c014def30e88e1fa73eefc79b37c6 452 Gene3D G3DSA:1.10.630.10 3 438 6.8E-34 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 PhaeoP54_01356 703c014def30e88e1fa73eefc79b37c6 452 Pfam PF00067 Cytochrome P450 260 379 1.6E-24 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 PhaeoP54_01356 703c014def30e88e1fa73eefc79b37c6 452 PRINTS PR00463 E-class P450 group I signature 370 380 2.8E-8 T 14-10-2018 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 PhaeoP54_01356 703c014def30e88e1fa73eefc79b37c6 452 PRINTS PR00463 E-class P450 group I signature 338 362 2.8E-8 T 14-10-2018 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 PhaeoP54_01356 703c014def30e88e1fa73eefc79b37c6 452 PRINTS PR00463 E-class P450 group I signature 29 48 2.8E-8 T 14-10-2018 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 PhaeoP54_01356 703c014def30e88e1fa73eefc79b37c6 452 PRINTS PR00463 E-class P450 group I signature 260 286 2.8E-8 T 14-10-2018 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 PhaeoP54_01356 703c014def30e88e1fa73eefc79b37c6 452 SUPERFAMILY SSF48264 27 432 1.15E-35 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 PhaeoP54_03359 3b4fd032bf116a7cfd8a5300d3d74709 314 SUPERFAMILY SSF46689 213 258 3.49E-5 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PhaeoP54_03359 3b4fd032bf116a7cfd8a5300d3d74709 314 SUPERFAMILY SSF52317 11 195 8.74E-30 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like PhaeoP54_03359 3b4fd032bf116a7cfd8a5300d3d74709 314 Pfam PF12833 Helix-turn-helix domain 233 311 9.0E-21 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PhaeoP54_03359 3b4fd032bf116a7cfd8a5300d3d74709 314 SUPERFAMILY SSF46689 263 312 4.93E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PhaeoP54_03359 3b4fd032bf116a7cfd8a5300d3d74709 314 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 264 306 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 PhaeoP54_03359 3b4fd032bf116a7cfd8a5300d3d74709 314 Gene3D G3DSA:1.10.10.60 210 314 2.3E-27 T 14-10-2018 PhaeoP54_03359 3b4fd032bf116a7cfd8a5300d3d74709 314 Gene3D G3DSA:3.40.50.880 8 205 2.3E-38 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like PhaeoP54_03359 3b4fd032bf116a7cfd8a5300d3d74709 314 SMART SM00342 227 310 1.7E-24 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PhaeoP54_03238 606d26beab4daf66f6f1f755587014ba 216 PIRSF PIRSF000239 1 214 1.0E-70 T 14-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 PhaeoP54_03238 606d26beab4daf66f6f1f755587014ba 216 SUPERFAMILY SSF52833 3 213 2.41E-62 T 14-10-2018 IPR036249 Thioredoxin-like superfamily PhaeoP54_03238 606d26beab4daf66f6f1f755587014ba 216 Gene3D G3DSA:3.30.1020.10 154 216 2.7E-19 T 14-10-2018 PhaeoP54_03238 606d26beab4daf66f6f1f755587014ba 216 Pfam PF00578 AhpC/TSA family 5 142 2.4E-27 T 14-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 PhaeoP54_03238 606d26beab4daf66f6f1f755587014ba 216 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 170 200 1.6E-12 T 14-10-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 PhaeoP54_03238 606d26beab4daf66f6f1f755587014ba 216 Gene3D G3DSA:3.40.30.10 1 153 9.0E-47 T 14-10-2018 PhaeoP54_00914 ecaabc0d2ee69ea1b7862aab170b4a09 787 Pfam PF13361 UvrD-like helicase C-terminal domain 300 466 3.0E-29 T 14-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 PhaeoP54_00914 ecaabc0d2ee69ea1b7862aab170b4a09 787 Pfam PF13361 UvrD-like helicase C-terminal domain 529 636 4.6E-27 T 14-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 PhaeoP54_00914 ecaabc0d2ee69ea1b7862aab170b4a09 787 Gene3D G3DSA:3.40.50.300 303 655 1.3E-103 T 14-10-2018 PhaeoP54_00914 ecaabc0d2ee69ea1b7862aab170b4a09 787 Gene3D G3DSA:1.10.486.10 410 568 1.3E-103 T 14-10-2018 PhaeoP54_00914 ecaabc0d2ee69ea1b7862aab170b4a09 787 Gene3D G3DSA:1.10.10.160 133 212 4.4E-97 T 14-10-2018 IPR013986 DExx box DNA helicase domain superfamily PhaeoP54_00914 ecaabc0d2ee69ea1b7862aab170b4a09 787 Pfam PF00580 UvrD/REP helicase N-terminal domain 31 295 2.3E-78 T 14-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 PhaeoP54_00914 ecaabc0d2ee69ea1b7862aab170b4a09 787 SUPERFAMILY SSF52540 26 663 2.29E-172 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_00914 ecaabc0d2ee69ea1b7862aab170b4a09 787 Gene3D G3DSA:3.40.50.300 31 295 4.4E-97 T 14-10-2018 PhaeoP54_01273 d87f3c34f24069365f5a4e6090214000 231 ProSitePatterns PS00113 Adenylate kinase signature. 94 105 - T 14-10-2018 IPR033690 Adenylate kinase, conserved site KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 PhaeoP54_01273 d87f3c34f24069365f5a4e6090214000 231 Pfam PF00406 Adenylate kinase 18 204 1.2E-54 T 14-10-2018 PhaeoP54_01273 d87f3c34f24069365f5a4e6090214000 231 Pfam PF05191 Adenylate kinase, active site lid 140 176 4.9E-10 T 14-10-2018 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 PhaeoP54_01273 d87f3c34f24069365f5a4e6090214000 231 TIGRFAM TIGR01351 adk: adenylate kinase 16 225 2.3E-74 T 14-10-2018 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 PhaeoP54_01273 d87f3c34f24069365f5a4e6090214000 231 SUPERFAMILY SSF52540 17 219 4.28E-36 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_01273 d87f3c34f24069365f5a4e6090214000 231 Hamap MF_00235 Adenylate kinase [adk]. 14 227 45.713 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 PhaeoP54_01273 d87f3c34f24069365f5a4e6090214000 231 Gene3D G3DSA:3.40.50.300 3 226 1.8E-71 T 14-10-2018 PhaeoP54_01273 d87f3c34f24069365f5a4e6090214000 231 PRINTS PR00094 Adenylate kinase signature 17 30 1.0E-33 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 PhaeoP54_01273 d87f3c34f24069365f5a4e6090214000 231 PRINTS PR00094 Adenylate kinase signature 94 110 1.0E-33 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 PhaeoP54_01273 d87f3c34f24069365f5a4e6090214000 231 PRINTS PR00094 Adenylate kinase signature 174 189 1.0E-33 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 PhaeoP54_01273 d87f3c34f24069365f5a4e6090214000 231 PRINTS PR00094 Adenylate kinase signature 45 59 1.0E-33 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 PhaeoP54_01273 d87f3c34f24069365f5a4e6090214000 231 PRINTS PR00094 Adenylate kinase signature 191 205 1.0E-33 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 PhaeoP54_03849 382b3876b457a9a19755c8f0ebca3ddc 666 Pfam PF02534 Type IV secretory system Conjugative DNA transfer 127 541 6.0E-87 T 14-10-2018 IPR003688 Type IV secretion system protein TraG/VirD4 GO:0009291|GO:0016020 PhaeoP54_03849 382b3876b457a9a19755c8f0ebca3ddc 666 SUPERFAMILY SSF52540 108 538 1.73E-50 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_03849 382b3876b457a9a19755c8f0ebca3ddc 666 Gene3D G3DSA:3.40.50.300 286 534 8.8E-41 T 14-10-2018 PhaeoP54_04070 826ca5920367d09837e35fa8d4217592 255 ProSitePatterns PS00211 ABC transporters family signature. 152 166 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PhaeoP54_04070 826ca5920367d09837e35fa8d4217592 255 Gene3D G3DSA:3.40.50.300 13 255 1.8E-72 T 14-10-2018 PhaeoP54_04070 826ca5920367d09837e35fa8d4217592 255 PIRSF PIRSF039085 10 255 7.7E-98 T 14-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 PhaeoP54_04070 826ca5920367d09837e35fa8d4217592 255 SUPERFAMILY SSF52540 14 250 4.78E-72 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_04070 826ca5920367d09837e35fa8d4217592 255 SMART SM00382 38 228 2.4E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_04070 826ca5920367d09837e35fa8d4217592 255 Pfam PF00005 ABC transporter 29 180 7.4E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PhaeoP54_03333 7a3cf9766bde966f4835eec554b7861a 444 Pfam PF00033 Cytochrome b/b6/petB 35 220 5.9E-71 T 14-10-2018 IPR005797 Cytochrome b/b6, N-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 PhaeoP54_03333 7a3cf9766bde966f4835eec554b7861a 444 SUPERFAMILY SSF81648 285 422 3.71E-36 T 14-10-2018 IPR036150 Cytochrome b/b6, C-terminal domain superfamily GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 PhaeoP54_03333 7a3cf9766bde966f4835eec554b7861a 444 Gene3D G3DSA:1.20.810.10 1 443 4.8E-192 T 14-10-2018 IPR027387 Cytochrome b/b6-like domain superfamily Reactome: R-HSA-611105 PhaeoP54_03333 7a3cf9766bde966f4835eec554b7861a 444 SUPERFAMILY SSF81342 17 284 7.22E-102 T 14-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 PhaeoP54_03333 7a3cf9766bde966f4835eec554b7861a 444 PIRSF PIRSF038885 7 432 1.7E-190 T 14-10-2018 IPR030689 Cytochrome b GO:0006122|GO:0008121|GO:0009055|GO:0045275 Reactome: R-HSA-611105 PhaeoP54_03333 7a3cf9766bde966f4835eec554b7861a 444 Pfam PF00032 Cytochrome b(C-terminal)/b6/petD 282 401 2.3E-37 T 14-10-2018 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 PhaeoP54_03242 b042e003d59851ab0b86b4607fd1f2ac 285 Pfam PF01531 Glycosyl transferase family 11 103 282 6.9E-31 T 14-10-2018 IPR002516 Glycosyl transferase, family 11 GO:0005975|GO:0008107|GO:0016020 MetaCyc: PWY-7831|MetaCyc: PWY-7833 PhaeoP54_03242 b042e003d59851ab0b86b4607fd1f2ac 285 Gene3D G3DSA:3.40.50.11350 132 263 1.1E-5 T 14-10-2018 PhaeoP54_03182 35b4b1ba6938416aa51636bfa5190c36 872 Gene3D G3DSA:3.40.50.300 158 347 2.4E-73 T 14-10-2018 PhaeoP54_03182 35b4b1ba6938416aa51636bfa5190c36 872 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 630 648 - T 14-10-2018 IPR028299 ClpA/B, conserved site 2 PhaeoP54_03182 35b4b1ba6938416aa51636bfa5190c36 872 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 765 844 1.2E-27 T 14-10-2018 IPR019489 Clp ATPase, C-terminal PhaeoP54_03182 35b4b1ba6938416aa51636bfa5190c36 872 SMART SM00382 198 344 7.8E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_03182 35b4b1ba6938416aa51636bfa5190c36 872 SMART SM00382 596 747 2.7E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_03182 35b4b1ba6938416aa51636bfa5190c36 872 SUPERFAMILY SSF81923 4 156 3.27E-39 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 PhaeoP54_03182 35b4b1ba6938416aa51636bfa5190c36 872 Gene3D G3DSA:3.40.50.300 348 543 1.2E-72 T 14-10-2018 PhaeoP54_03182 35b4b1ba6938416aa51636bfa5190c36 872 Gene3D G3DSA:1.10.8.60 765 857 3.8E-28 T 14-10-2018 PhaeoP54_03182 35b4b1ba6938416aa51636bfa5190c36 872 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 294 306 - T 14-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 PhaeoP54_03182 35b4b1ba6938416aa51636bfa5190c36 872 SMART SM01086 765 854 4.6E-39 T 14-10-2018 IPR019489 Clp ATPase, C-terminal PhaeoP54_03182 35b4b1ba6938416aa51636bfa5190c36 872 Pfam PF07724 AAA domain (Cdc48 subfamily) 595 758 4.0E-54 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 PhaeoP54_03182 35b4b1ba6938416aa51636bfa5190c36 872 Gene3D G3DSA:1.10.1780.10 1 149 3.8E-32 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 PhaeoP54_03182 35b4b1ba6938416aa51636bfa5190c36 872 SUPERFAMILY SSF52540 545 845 1.84E-80 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_03182 35b4b1ba6938416aa51636bfa5190c36 872 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 203 316 3.4E-12 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 PhaeoP54_03182 35b4b1ba6938416aa51636bfa5190c36 872 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 67 8.0E-13 T 14-10-2018 IPR004176 Clp, N-terminal PhaeoP54_03182 35b4b1ba6938416aa51636bfa5190c36 872 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 94 144 6.3E-5 T 14-10-2018 IPR004176 Clp, N-terminal PhaeoP54_03182 35b4b1ba6938416aa51636bfa5190c36 872 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 6 852 0.0 T 14-10-2018 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0042026 PhaeoP54_03182 35b4b1ba6938416aa51636bfa5190c36 872 SUPERFAMILY SSF52540 159 544 6.25E-99 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_03182 35b4b1ba6938416aa51636bfa5190c36 872 Gene3D G3DSA:3.40.50.300 549 764 8.2E-87 T 14-10-2018 PhaeoP54_03182 35b4b1ba6938416aa51636bfa5190c36 872 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 600 618 7.3E-41 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 PhaeoP54_03182 35b4b1ba6938416aa51636bfa5190c36 872 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 707 721 7.3E-41 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 PhaeoP54_03182 35b4b1ba6938416aa51636bfa5190c36 872 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 674 692 7.3E-41 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 PhaeoP54_03182 35b4b1ba6938416aa51636bfa5190c36 872 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 645 663 7.3E-41 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 PhaeoP54_03362 ce9be32816cc71ef705249e2f6945a67 95 Gene3D G3DSA:4.10.520.10 5 95 2.4E-26 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 PhaeoP54_03362 ce9be32816cc71ef705249e2f6945a67 95 SMART SM00411 5 94 3.9E-21 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 PhaeoP54_03362 ce9be32816cc71ef705249e2f6945a67 95 Pfam PF00216 Bacterial DNA-binding protein 5 94 6.4E-24 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 PhaeoP54_03362 ce9be32816cc71ef705249e2f6945a67 95 SUPERFAMILY SSF47729 5 94 1.62E-25 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 PhaeoP54_02595 1f805d0600f00fd2287c4742202f9329 426 Gene3D G3DSA:3.20.20.140 52 359 3.5E-149 T 14-10-2018 PhaeoP54_02595 1f805d0600f00fd2287c4742202f9329 426 SUPERFAMILY SSF51338 1 63 8.64E-14 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 PhaeoP54_02595 1f805d0600f00fd2287c4742202f9329 426 Pfam PF07969 Amidohydrolase family 39 397 2.4E-48 T 14-10-2018 IPR013108 Amidohydrolase 3 PhaeoP54_02595 1f805d0600f00fd2287c4742202f9329 426 Gene3D G3DSA:2.30.40.10 13 402 3.5E-149 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 PhaeoP54_02595 1f805d0600f00fd2287c4742202f9329 426 SUPERFAMILY SSF51556 51 369 7.23E-105 T 14-10-2018 IPR032466 Metal-dependent hydrolase PhaeoP54_00872 e6ce984c8235fadb49551a0f3c52123b 644 SMART SM00283 328 575 4.9E-101 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 PhaeoP54_00872 e6ce984c8235fadb49551a0f3c52123b 644 Pfam PF17200 Single Cache domain 2 42 189 1.7E-40 T 14-10-2018 IPR033480 Single Cache domain 2 PhaeoP54_00872 e6ce984c8235fadb49551a0f3c52123b 644 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 503 532 5.2E-44 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 PhaeoP54_00872 e6ce984c8235fadb49551a0f3c52123b 644 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 455 484 5.2E-44 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 PhaeoP54_00872 e6ce984c8235fadb49551a0f3c52123b 644 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 349 378 5.2E-44 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 PhaeoP54_00872 e6ce984c8235fadb49551a0f3c52123b 644 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 426 453 5.2E-44 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 PhaeoP54_00872 e6ce984c8235fadb49551a0f3c52123b 644 Pfam PF00672 HAMP domain 212 261 1.2E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 PhaeoP54_00872 e6ce984c8235fadb49551a0f3c52123b 644 SMART SM00304 275 327 0.043 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 PhaeoP54_00872 e6ce984c8235fadb49551a0f3c52123b 644 SMART SM00304 212 265 1.6E-10 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 PhaeoP54_00872 e6ce984c8235fadb49551a0f3c52123b 644 SUPERFAMILY SSF158472 212 262 3.14E-8 T 14-10-2018 PhaeoP54_00872 e6ce984c8235fadb49551a0f3c52123b 644 Gene3D G3DSA:1.10.8.500 212 264 9.4E-12 T 14-10-2018 PhaeoP54_00872 e6ce984c8235fadb49551a0f3c52123b 644 Gene3D G3DSA:3.30.450.20 34 188 3.5E-44 T 14-10-2018 PhaeoP54_00872 e6ce984c8235fadb49551a0f3c52123b 644 Gene3D G3DSA:1.10.287.950 276 577 3.3E-80 T 14-10-2018 PhaeoP54_00872 e6ce984c8235fadb49551a0f3c52123b 644 SMART SM01049 35 129 4.7E-24 T 14-10-2018 IPR033480 Single Cache domain 2 PhaeoP54_00872 e6ce984c8235fadb49551a0f3c52123b 644 SUPERFAMILY SSF58104 295 578 4.58E-71 T 14-10-2018 PhaeoP54_00872 e6ce984c8235fadb49551a0f3c52123b 644 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 389 543 2.0E-52 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 PhaeoP54_03361 21f17f1bc4d7b7b579b3746b1d19d3a7 493 Gene3D G3DSA:3.40.50.1580 185 493 4.1E-99 T 14-10-2018 PhaeoP54_03361 21f17f1bc4d7b7b579b3746b1d19d3a7 493 SUPERFAMILY SSF53167 16 492 3.01E-156 T 14-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 PhaeoP54_03361 21f17f1bc4d7b7b579b3746b1d19d3a7 493 Pfam PF01048 Phosphorylase superfamily 257 439 3.6E-13 T 14-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 PhaeoP54_03361 21f17f1bc4d7b7b579b3746b1d19d3a7 493 TIGRFAM TIGR01717 AMP-nucleosdse: AMP nucleosidase 19 492 2.9E-201 T 14-10-2018 IPR011271 AMP nucleosidase GO:0008714|GO:0009116|GO:0044209 KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 PhaeoP54_03361 21f17f1bc4d7b7b579b3746b1d19d3a7 493 Pfam PF10423 Bacterial AMP nucleoside phosphorylase N-terminus 20 179 5.2E-55 T 14-10-2018 IPR018953 AMP nucleoside phosphorylase, N-terminal KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 PhaeoP54_03361 21f17f1bc4d7b7b579b3746b1d19d3a7 493 Hamap MF_01932 AMP nucleosidase [amn]. 11 493 59.815 T 14-10-2018 IPR011271 AMP nucleosidase GO:0008714|GO:0009116|GO:0044209 KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 PhaeoP54_03361 21f17f1bc4d7b7b579b3746b1d19d3a7 493 Gene3D G3DSA:3.30.1730.10 11 184 1.2E-46 T 14-10-2018 IPR037109 AMP nucleoside phosphorylase, N-terminal domain superfamily KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 PhaeoP54_01405 a244e50fd828c3d8b9bdb8f24d053ab5 390 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 143 226 6.1E-35 T 14-10-2018 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 PhaeoP54_01405 a244e50fd828c3d8b9bdb8f24d053ab5 390 PIRSF PIRSF006205 1 390 3.4E-135 T 14-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 PhaeoP54_01405 a244e50fd828c3d8b9bdb8f24d053ab5 390 SUPERFAMILY SSF55347 124 261 1.11E-54 T 14-10-2018 PhaeoP54_01405 a244e50fd828c3d8b9bdb8f24d053ab5 390 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 4 384 41.911 T 14-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 PhaeoP54_01405 a244e50fd828c3d8b9bdb8f24d053ab5 390 Pfam PF13288 DXP reductoisomerase C-terminal domain 258 372 6.7E-34 T 14-10-2018 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 PhaeoP54_01405 a244e50fd828c3d8b9bdb8f24d053ab5 390 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 4 129 5.3E-36 T 14-10-2018 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 PhaeoP54_01405 a244e50fd828c3d8b9bdb8f24d053ab5 390 Gene3D G3DSA:3.40.50.720 1 147 1.5E-44 T 14-10-2018 PhaeoP54_01405 a244e50fd828c3d8b9bdb8f24d053ab5 390 SUPERFAMILY SSF69055 289 387 3.92E-26 T 14-10-2018 IPR036169 DXP reductoisomerase, C-terminal domain superfamily KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 PhaeoP54_01405 a244e50fd828c3d8b9bdb8f24d053ab5 390 Gene3D G3DSA:1.10.1740.10 300 387 1.1E-21 T 14-10-2018 PhaeoP54_01405 a244e50fd828c3d8b9bdb8f24d053ab5 390 SUPERFAMILY SSF51735 2 147 7.08E-43 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PhaeoP54_01405 a244e50fd828c3d8b9bdb8f24d053ab5 390 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1 379 3.3E-123 T 14-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 PhaeoP54_02242 94ed16b999ca6418b8097eb204c4b846 451 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 337 444 1.2E-34 T 14-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 PhaeoP54_02242 94ed16b999ca6418b8097eb204c4b846 451 SUPERFAMILY SSF51905 5 358 2.12E-56 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PhaeoP54_02242 94ed16b999ca6418b8097eb204c4b846 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 169 187 1.2E-31 T 14-10-2018 PhaeoP54_02242 94ed16b999ca6418b8097eb204c4b846 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 1.2E-31 T 14-10-2018 PhaeoP54_02242 94ed16b999ca6418b8097eb204c4b846 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 132 150 1.2E-31 T 14-10-2018 PhaeoP54_02242 94ed16b999ca6418b8097eb204c4b846 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 253 269 1.2E-31 T 14-10-2018 PhaeoP54_02242 94ed16b999ca6418b8097eb204c4b846 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 282 304 1.2E-31 T 14-10-2018 PhaeoP54_02242 94ed16b999ca6418b8097eb204c4b846 451 PIRSF PIRSF000350 1 447 1.7E-77 T 14-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 PhaeoP54_02242 94ed16b999ca6418b8097eb204c4b846 451 TIGRFAM TIGR01424 gluta_reduc_2: glutathione-disulfide reductase 3 445 1.5E-192 T 14-10-2018 IPR006324 Glutathione-disulphide reductase GO:0004362|GO:0006749|GO:0050660|GO:0050661|GO:0055114 KEGG: 00480+1.8.1.7|MetaCyc: PWY-4081 PhaeoP54_02242 94ed16b999ca6418b8097eb204c4b846 451 Gene3D G3DSA:3.50.50.60 5 317 3.3E-110 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PhaeoP54_02242 94ed16b999ca6418b8097eb204c4b846 451 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 317 7.6E-66 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PhaeoP54_02242 94ed16b999ca6418b8097eb204c4b846 451 SUPERFAMILY SSF55424 333 446 3.44E-35 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 PhaeoP54_02242 94ed16b999ca6418b8097eb204c4b846 451 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 39 49 - T 14-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 PhaeoP54_02242 94ed16b999ca6418b8097eb204c4b846 451 Gene3D G3DSA:3.50.50.60 144 260 3.3E-110 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PhaeoP54_02242 94ed16b999ca6418b8097eb204c4b846 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 169 194 3.7E-70 T 14-10-2018 PhaeoP54_02242 94ed16b999ca6418b8097eb204c4b846 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 3.7E-70 T 14-10-2018 PhaeoP54_02242 94ed16b999ca6418b8097eb204c4b846 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 333 354 3.7E-70 T 14-10-2018 PhaeoP54_02242 94ed16b999ca6418b8097eb204c4b846 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 397 412 3.7E-70 T 14-10-2018 PhaeoP54_02242 94ed16b999ca6418b8097eb204c4b846 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 38 53 3.7E-70 T 14-10-2018 PhaeoP54_02242 94ed16b999ca6418b8097eb204c4b846 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 254 268 3.7E-70 T 14-10-2018 PhaeoP54_02242 94ed16b999ca6418b8097eb204c4b846 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 419 439 3.7E-70 T 14-10-2018 PhaeoP54_02242 94ed16b999ca6418b8097eb204c4b846 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 135 144 3.7E-70 T 14-10-2018 PhaeoP54_02242 94ed16b999ca6418b8097eb204c4b846 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 297 304 3.7E-70 T 14-10-2018 PhaeoP54_02242 94ed16b999ca6418b8097eb204c4b846 451 Gene3D G3DSA:3.30.390.30 336 451 2.9E-44 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 PhaeoP54_03594 920b7bb0b0054c9a5e9f4515c0f10ad3 304 SUPERFAMILY SSF52540 16 300 1.59E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_03594 920b7bb0b0054c9a5e9f4515c0f10ad3 304 Pfam PF00685 Sulfotransferase domain 29 215 1.1E-11 T 14-10-2018 IPR000863 Sulfotransferase domain GO:0008146 PhaeoP54_03918 8c9a1bf188a29920584e0e66cd3b2872 288 Gene3D G3DSA:3.20.20.150 1 270 7.3E-67 T 14-10-2018 PhaeoP54_03918 8c9a1bf188a29920584e0e66cd3b2872 288 Pfam PF01261 Xylose isomerase-like TIM barrel 23 206 1.0E-26 T 14-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain PhaeoP54_03918 8c9a1bf188a29920584e0e66cd3b2872 288 SUPERFAMILY SSF51658 1 252 1.52E-45 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily PhaeoP54_00602 4ba61afe77c9b03a00f2915c909dd943 462 TIGRFAM TIGR00260 thrC: threonine synthase 94 424 7.8E-80 T 14-10-2018 IPR004450 Threonine synthase-like PhaeoP54_00602 4ba61afe77c9b03a00f2915c909dd943 462 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 99 353 2.6E-13 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme PhaeoP54_00602 4ba61afe77c9b03a00f2915c909dd943 462 SUPERFAMILY SSF53686 1 459 9.67E-161 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme PhaeoP54_00602 4ba61afe77c9b03a00f2915c909dd943 462 Gene3D G3DSA:3.40.50.1100 97 428 9.6E-149 T 14-10-2018 PhaeoP54_00602 4ba61afe77c9b03a00f2915c909dd943 462 Gene3D G3DSA:3.90.1380.10 1 86 1.7E-29 T 14-10-2018 IPR037158 Threonine synthase, N-terminal domain superfamily PhaeoP54_00602 4ba61afe77c9b03a00f2915c909dd943 462 Gene3D G3DSA:3.40.50.1100 108 441 9.6E-149 T 14-10-2018 PhaeoP54_00602 4ba61afe77c9b03a00f2915c909dd943 462 Pfam PF14821 Threonine synthase N terminus 2 80 2.0E-29 T 14-10-2018 IPR029144 Threonine synthase, N-terminal PhaeoP54_00602 4ba61afe77c9b03a00f2915c909dd943 462 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 102 116 - T 14-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 PhaeoP54_01845 516c212fe2566772fff821dc616b5c13 199 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 164 171 - T 14-10-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 PhaeoP54_01845 516c212fe2566772fff821dc616b5c13 199 Gene3D G3DSA:2.40.500.20 91 199 7.2E-39 T 14-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 PhaeoP54_01845 516c212fe2566772fff821dc616b5c13 199 Gene3D G3DSA:1.10.287.990 21 90 9.7E-20 T 14-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 PhaeoP54_01845 516c212fe2566772fff821dc616b5c13 199 PRINTS PR01703 Manganese superoxide dismutase signature 162 174 1.6E-18 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 PhaeoP54_01845 516c212fe2566772fff821dc616b5c13 199 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 1.6E-18 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 PhaeoP54_01845 516c212fe2566772fff821dc616b5c13 199 PRINTS PR01703 Manganese superoxide dismutase signature 73 86 1.6E-18 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 PhaeoP54_01845 516c212fe2566772fff821dc616b5c13 199 PRINTS PR01703 Manganese superoxide dismutase signature 28 41 1.6E-18 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 PhaeoP54_01845 516c212fe2566772fff821dc616b5c13 199 PRINTS PR01703 Manganese superoxide dismutase signature 125 133 1.6E-18 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 PhaeoP54_01845 516c212fe2566772fff821dc616b5c13 199 SUPERFAMILY SSF54719 92 198 7.2E-40 T 14-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 PhaeoP54_01845 516c212fe2566772fff821dc616b5c13 199 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 3 89 2.0E-24 T 14-10-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 PhaeoP54_01845 516c212fe2566772fff821dc616b5c13 199 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 98 198 2.3E-34 T 14-10-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 PhaeoP54_01845 516c212fe2566772fff821dc616b5c13 199 PIRSF PIRSF000349 1 199 6.4E-72 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 PhaeoP54_01845 516c212fe2566772fff821dc616b5c13 199 SUPERFAMILY SSF46609 1 91 5.11E-30 T 14-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 PhaeoP54_00085 68d6667ef2ed5b433c0b1cb377f3b854 307 Pfam PF01882 Protein of unknown function DUF58 61 148 1.6E-11 T 14-10-2018 IPR002881 Domain of unknown function DUF58 PhaeoP54_00903 105ea3727eff92c48b52d3e60a9b661d 450 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 242 279 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PhaeoP54_00903 105ea3727eff92c48b52d3e60a9b661d 450 PIRSF PIRSF000521 10 438 8.5E-35 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PhaeoP54_00903 105ea3727eff92c48b52d3e60a9b661d 450 Gene3D G3DSA:3.90.1150.10 5 436 7.3E-152 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 PhaeoP54_00903 105ea3727eff92c48b52d3e60a9b661d 450 Gene3D G3DSA:3.40.640.10 51 332 7.3E-152 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PhaeoP54_00903 105ea3727eff92c48b52d3e60a9b661d 450 Pfam PF00202 Aminotransferase class-III 17 435 2.5E-94 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PhaeoP54_00903 105ea3727eff92c48b52d3e60a9b661d 450 SUPERFAMILY SSF53383 12 436 6.35E-117 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PhaeoP54_02410 19b846fe091ff55f396491174a7c83da 153 SMART SM00344 5 114 7.4E-39 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 PhaeoP54_02410 19b846fe091ff55f396491174a7c83da 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 5 21 4.3E-11 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 PhaeoP54_02410 19b846fe091ff55f396491174a7c83da 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 32 51 4.3E-11 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 PhaeoP54_02410 19b846fe091ff55f396491174a7c83da 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 21 32 4.3E-11 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 PhaeoP54_02410 19b846fe091ff55f396491174a7c83da 153 Pfam PF01037 Lrp/AsnC ligand binding domain 71 143 6.8E-18 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain PhaeoP54_02410 19b846fe091ff55f396491174a7c83da 153 Gene3D G3DSA:3.30.70.920 59 141 1.5E-22 T 14-10-2018 PhaeoP54_02410 19b846fe091ff55f396491174a7c83da 153 SUPERFAMILY SSF46785 4 64 4.63E-15 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_02410 19b846fe091ff55f396491174a7c83da 153 ProSitePatterns PS00519 AsnC-type HTH domain signature. 23 49 - T 14-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site PhaeoP54_02410 19b846fe091ff55f396491174a7c83da 153 Gene3D G3DSA:1.10.10.10 1 58 4.3E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_02410 19b846fe091ff55f396491174a7c83da 153 SUPERFAMILY SSF54909 67 146 2.95E-18 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel PhaeoP54_02410 19b846fe091ff55f396491174a7c83da 153 Pfam PF13412 Winged helix-turn-helix DNA-binding 5 50 3.6E-16 T 14-10-2018 PhaeoP54_01929 975cca7cc8b6cb533e8e58ce24cf7446 360 PIRSF PIRSF039026 1 357 2.5E-126 T 14-10-2018 IPR026289 Solute binding protein, mannitol/chloroaromatic system-like PhaeoP54_01929 975cca7cc8b6cb533e8e58ce24cf7446 360 Gene3D G3DSA:3.40.190.10 153 323 8.3E-109 T 14-10-2018 PhaeoP54_01929 975cca7cc8b6cb533e8e58ce24cf7446 360 Gene3D G3DSA:3.40.190.170 34 333 8.3E-109 T 14-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily PhaeoP54_01929 975cca7cc8b6cb533e8e58ce24cf7446 360 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 2 21 4.0E-4 T 14-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal PhaeoP54_01929 975cca7cc8b6cb533e8e58ce24cf7446 360 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 47 321 1.6E-46 T 14-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 PhaeoP54_03139 ff544e8d6feda6380846fad329ec27c0 102 SUPERFAMILY SSF48600 16 99 4.43E-22 T 14-10-2018 IPR036263 Chorismate mutase type II superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 PhaeoP54_03139 ff544e8d6feda6380846fad329ec27c0 102 SMART SM00830 20 100 1.5E-20 T 14-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 PhaeoP54_03139 ff544e8d6feda6380846fad329ec27c0 102 Gene3D G3DSA:1.20.59.10 8 102 1.6E-34 T 14-10-2018 IPR036979 Chorismate mutase domain superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 PhaeoP54_03139 ff544e8d6feda6380846fad329ec27c0 102 TIGRFAM TIGR01795 CM_mono_cladeE: chorismate mutase 14 99 5.4E-34 T 14-10-2018 IPR010951 Chorismate mutase, bacteria PhaeoP54_03139 ff544e8d6feda6380846fad329ec27c0 102 Pfam PF01817 Chorismate mutase type II 20 95 5.5E-16 T 14-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 PhaeoP54_00263 9f726bb35307dd9792feeb74d9eede08 153 SUPERFAMILY SSF54690 4 152 2.62E-45 T 14-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 PhaeoP54_00263 9f726bb35307dd9792feeb74d9eede08 153 Gene3D G3DSA:3.90.1170.40 1 152 1.5E-45 T 14-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 PhaeoP54_00263 9f726bb35307dd9792feeb74d9eede08 153 Pfam PF02391 MoaE protein 27 122 4.1E-31 T 14-10-2018 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 PhaeoP54_00691 0bed894d24aa5b2c0bd395bae77efcfa 297 Pfam PF01261 Xylose isomerase-like TIM barrel 29 248 1.5E-33 T 14-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain PhaeoP54_00691 0bed894d24aa5b2c0bd395bae77efcfa 297 Gene3D G3DSA:3.20.20.150 1 294 1.2E-73 T 14-10-2018 PhaeoP54_00691 0bed894d24aa5b2c0bd395bae77efcfa 297 SUPERFAMILY SSF51658 3 294 5.11E-61 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily PhaeoP54_00417 b6c79b886320a3ce0a340709d294d609 592 ProSitePatterns PS00211 ABC transporters family signature. 158 172 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PhaeoP54_00417 b6c79b886320a3ce0a340709d294d609 592 ProSitePatterns PS00211 ABC transporters family signature. 438 452 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PhaeoP54_00417 b6c79b886320a3ce0a340709d294d609 592 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 237 277 2.9E-5 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 PhaeoP54_00417 b6c79b886320a3ce0a340709d294d609 592 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 517 547 5.8E-7 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 PhaeoP54_00417 b6c79b886320a3ce0a340709d294d609 592 Pfam PF00005 ABC transporter 22 185 2.1E-23 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PhaeoP54_00417 b6c79b886320a3ce0a340709d294d609 592 Gene3D G3DSA:3.40.50.300 2 277 4.8E-78 T 14-10-2018 PhaeoP54_00417 b6c79b886320a3ce0a340709d294d609 592 Gene3D G3DSA:3.40.50.300 278 592 1.8E-79 T 14-10-2018 PhaeoP54_00417 b6c79b886320a3ce0a340709d294d609 592 Pfam PF00005 ABC transporter 308 466 7.2E-26 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PhaeoP54_00417 b6c79b886320a3ce0a340709d294d609 592 SUPERFAMILY SSF52540 4 257 6.56E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_00417 b6c79b886320a3ce0a340709d294d609 592 SMART SM00382 30 235 1.1E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_00417 b6c79b886320a3ce0a340709d294d609 592 SMART SM00382 316 515 2.0E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_00417 b6c79b886320a3ce0a340709d294d609 592 SUPERFAMILY SSF52540 280 537 2.4E-62 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_02727 58b085faa5b96eadc9eb43adc4a84664 836 SUPERFAMILY SSF51905 5 427 1.47E-57 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PhaeoP54_02727 58b085faa5b96eadc9eb43adc4a84664 836 Gene3D G3DSA:3.30.9.10 86 342 4.3E-130 T 14-10-2018 PhaeoP54_02727 58b085faa5b96eadc9eb43adc4a84664 836 Gene3D G3DSA:3.50.50.60 8 400 4.3E-130 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PhaeoP54_02727 58b085faa5b96eadc9eb43adc4a84664 836 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 730 820 5.0E-14 T 14-10-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 PhaeoP54_02727 58b085faa5b96eadc9eb43adc4a84664 836 Gene3D G3DSA:2.40.30.110 740 820 7.5E-18 T 14-10-2018 PhaeoP54_02727 58b085faa5b96eadc9eb43adc4a84664 836 Pfam PF01571 Aminomethyltransferase folate-binding domain 442 722 3.3E-65 T 14-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain PhaeoP54_02727 58b085faa5b96eadc9eb43adc4a84664 836 SUPERFAMILY SSF103025 434 739 1.0E-81 T 14-10-2018 PhaeoP54_02727 58b085faa5b96eadc9eb43adc4a84664 836 Pfam PF01266 FAD dependent oxidoreductase 7 381 2.9E-52 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 PhaeoP54_02727 58b085faa5b96eadc9eb43adc4a84664 836 SUPERFAMILY SSF101790 745 833 1.21E-17 T 14-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal PhaeoP54_02727 58b085faa5b96eadc9eb43adc4a84664 836 Pfam PF16350 FAD dependent oxidoreductase central domain 384 438 4.0E-14 T 14-10-2018 IPR032503 FAD dependent oxidoreductase, central domain PhaeoP54_02727 58b085faa5b96eadc9eb43adc4a84664 836 Gene3D G3DSA:3.30.1360.120 445 713 2.1E-94 T 14-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 PhaeoP54_02727 58b085faa5b96eadc9eb43adc4a84664 836 SUPERFAMILY SSF54373 234 342 2.31E-28 T 14-10-2018 PhaeoP54_02727 58b085faa5b96eadc9eb43adc4a84664 836 Gene3D G3DSA:3.30.70.1400 508 737 2.1E-94 T 14-10-2018 PhaeoP54_03312 57a7a09886de50e9712edadc93a57e02 579 SUPERFAMILY SSF51338 434 489 6.24E-7 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 PhaeoP54_03312 57a7a09886de50e9712edadc93a57e02 579 Pfam PF01979 Amidohydrolase family 137 460 2.2E-77 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 PhaeoP54_03312 57a7a09886de50e9712edadc93a57e02 579 ProSitePatterns PS01120 Urease nickel ligands signature. 139 152 - T 14-10-2018 IPR029754 Urease nickel binding site GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 PhaeoP54_03312 57a7a09886de50e9712edadc93a57e02 579 Gene3D G3DSA:3.20.20.140 141 579 7.3E-296 T 14-10-2018 PhaeoP54_03312 57a7a09886de50e9712edadc93a57e02 579 Hamap MF_01953 Urease subunit alpha [ureC]. 3 579 56.238 T 14-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 PhaeoP54_03312 57a7a09886de50e9712edadc93a57e02 579 ProSitePatterns PS00145 Urease active site. 329 345 - T 14-10-2018 IPR017950 Urease active site GO:0009039 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 PhaeoP54_03312 57a7a09886de50e9712edadc93a57e02 579 SUPERFAMILY SSF51556 142 579 2.52E-200 T 14-10-2018 IPR032466 Metal-dependent hydrolase PhaeoP54_03312 57a7a09886de50e9712edadc93a57e02 579 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 346 362 3.7E-34 T 14-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 PhaeoP54_03312 57a7a09886de50e9712edadc93a57e02 579 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 413 428 3.7E-34 T 14-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 PhaeoP54_03312 57a7a09886de50e9712edadc93a57e02 579 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 439 452 3.7E-34 T 14-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 PhaeoP54_03312 57a7a09886de50e9712edadc93a57e02 579 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 307 324 3.7E-34 T 14-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 PhaeoP54_03312 57a7a09886de50e9712edadc93a57e02 579 SUPERFAMILY SSF51338 4 189 3.42E-59 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 PhaeoP54_03312 57a7a09886de50e9712edadc93a57e02 579 Gene3D G3DSA:2.30.40.10 5 492 7.3E-296 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 PhaeoP54_03312 57a7a09886de50e9712edadc93a57e02 579 Pfam PF00449 Urease alpha-subunit, N-terminal domain 4 131 3.3E-53 T 14-10-2018 IPR011612 Urease alpha-subunit, N-terminal domain KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 PhaeoP54_03312 57a7a09886de50e9712edadc93a57e02 579 TIGRFAM TIGR01792 urease_alph: urease, alpha subunit 4 579 6.2E-292 T 14-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 PhaeoP54_01598 f5eed929ef30e4a0e4ec202c013849b4 236 Pfam PF00005 ABC transporter 21 166 1.7E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PhaeoP54_01598 f5eed929ef30e4a0e4ec202c013849b4 236 Gene3D G3DSA:3.40.50.300 1 230 6.4E-59 T 14-10-2018 PhaeoP54_01598 f5eed929ef30e4a0e4ec202c013849b4 236 SMART SM00382 30 215 5.7E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_01598 f5eed929ef30e4a0e4ec202c013849b4 236 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PhaeoP54_01598 f5eed929ef30e4a0e4ec202c013849b4 236 SUPERFAMILY SSF52540 1 223 1.68E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_01681 b9c33f293069014bf539e1d613457bb9 431 ProSitePatterns PS00480 Citrate synthase signature. 305 317 - T 14-10-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 PhaeoP54_01681 b9c33f293069014bf539e1d613457bb9 431 PIRSF PIRSF001369 39 431 1.8E-165 T 14-10-2018 IPR024176 Citrate synthase, bacterial-type PhaeoP54_01681 b9c33f293069014bf539e1d613457bb9 431 SUPERFAMILY SSF48256 5 431 4.97E-165 T 14-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 PhaeoP54_01681 b9c33f293069014bf539e1d613457bb9 431 Gene3D G3DSA:1.10.230.10 270 379 4.0E-147 T 14-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain PhaeoP54_01681 b9c33f293069014bf539e1d613457bb9 431 PRINTS PR00143 Citrate synthase signature 243 271 7.8E-56 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 PhaeoP54_01681 b9c33f293069014bf539e1d613457bb9 431 PRINTS PR00143 Citrate synthase signature 298 318 7.8E-56 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 PhaeoP54_01681 b9c33f293069014bf539e1d613457bb9 431 PRINTS PR00143 Citrate synthase signature 382 396 7.8E-56 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 PhaeoP54_01681 b9c33f293069014bf539e1d613457bb9 431 PRINTS PR00143 Citrate synthase signature 221 236 7.8E-56 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 PhaeoP54_01681 b9c33f293069014bf539e1d613457bb9 431 PRINTS PR00143 Citrate synthase signature 167 180 7.8E-56 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 PhaeoP54_01681 b9c33f293069014bf539e1d613457bb9 431 PRINTS PR00143 Citrate synthase signature 362 378 7.8E-56 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 PhaeoP54_01681 b9c33f293069014bf539e1d613457bb9 431 TIGRFAM TIGR01798 cit_synth_I: citrate (Si)-synthase 16 425 2.2E-232 T 14-10-2018 IPR010953 Citrate synthase, type I GO:0004108|GO:0005737 PhaeoP54_01681 b9c33f293069014bf539e1d613457bb9 431 Gene3D G3DSA:2.20.28.60 3 52 4.8E-22 T 14-10-2018 PhaeoP54_01681 b9c33f293069014bf539e1d613457bb9 431 Gene3D G3DSA:1.10.580.10 59 414 4.0E-147 T 14-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 PhaeoP54_01681 b9c33f293069014bf539e1d613457bb9 431 Pfam PF00285 Citrate synthase, C-terminal domain 48 414 5.9E-134 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 PhaeoP54_02368 5e56800efa8fd4dae55b4690bcad4dfd 74 Pfam PF06620 Protein of unknown function (DUF1150) 10 74 5.4E-20 T 14-10-2018 IPR009531 Protein of unknown function DUF1150 PhaeoP54_01586 d7a573cc7ec79df131c75c248a0bbe56 143 Gene3D G3DSA:3.30.1380.10 24 143 2.0E-12 T 14-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 PhaeoP54_01586 d7a573cc7ec79df131c75c248a0bbe56 143 Pfam PF05951 Bacterial protein of unknown function (DUF882) 5 141 5.7E-45 T 14-10-2018 IPR010275 Protein of unknown function DUF882 PhaeoP54_01586 d7a573cc7ec79df131c75c248a0bbe56 143 SUPERFAMILY SSF55166 14 142 6.28E-34 T 14-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 PhaeoP54_03857 105a13c80b2181f13e77dbd212e483d2 328 Pfam PF00437 Type II/IV secretion system protein 17 305 1.4E-55 T 14-10-2018 IPR001482 Type II/IV secretion system protein PhaeoP54_03857 105a13c80b2181f13e77dbd212e483d2 328 SUPERFAMILY SSF52540 15 310 6.03E-30 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_03857 105a13c80b2181f13e77dbd212e483d2 328 Gene3D G3DSA:3.40.50.300 121 324 3.9E-48 T 14-10-2018 PhaeoP54_03857 105a13c80b2181f13e77dbd212e483d2 328 Gene3D G3DSA:3.30.450.90 6 111 9.1E-11 T 14-10-2018 PhaeoP54_02790 2ccb82d08682a531b33ad3654ab9129b 290 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 1 286 62.558 T 14-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 PhaeoP54_02790 2ccb82d08682a531b33ad3654ab9129b 290 Pfam PF00701 Dihydrodipicolinate synthetase family 2 285 1.6E-86 T 14-10-2018 IPR002220 DapA-like GO:0016829 PhaeoP54_02790 2ccb82d08682a531b33ad3654ab9129b 290 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 132 162 - T 14-10-2018 IPR020625 Schiff base-forming aldolase, active site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 PhaeoP54_02790 2ccb82d08682a531b33ad3654ab9129b 290 SUPERFAMILY SSF51569 2 288 3.56E-100 T 14-10-2018 PhaeoP54_02790 2ccb82d08682a531b33ad3654ab9129b 290 Gene3D G3DSA:3.20.20.70 1 290 9.9E-111 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PhaeoP54_02790 2ccb82d08682a531b33ad3654ab9129b 290 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 37 54 - T 14-10-2018 IPR020624 Schiff base-forming aldolase, conserved site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 PhaeoP54_02790 2ccb82d08682a531b33ad3654ab9129b 290 PIRSF PIRSF001365 1 290 2.4E-84 T 14-10-2018 IPR002220 DapA-like GO:0016829 PhaeoP54_02790 2ccb82d08682a531b33ad3654ab9129b 290 PRINTS PR00146 Dihydrodipicolinate synthase signature 70 88 2.1E-30 T 14-10-2018 IPR002220 DapA-like GO:0016829 PhaeoP54_02790 2ccb82d08682a531b33ad3654ab9129b 290 PRINTS PR00146 Dihydrodipicolinate synthase signature 102 118 2.1E-30 T 14-10-2018 IPR002220 DapA-like GO:0016829 PhaeoP54_02790 2ccb82d08682a531b33ad3654ab9129b 290 PRINTS PR00146 Dihydrodipicolinate synthase signature 127 144 2.1E-30 T 14-10-2018 IPR002220 DapA-like GO:0016829 PhaeoP54_02790 2ccb82d08682a531b33ad3654ab9129b 290 PRINTS PR00146 Dihydrodipicolinate synthase signature 34 55 2.1E-30 T 14-10-2018 IPR002220 DapA-like GO:0016829 PhaeoP54_02790 2ccb82d08682a531b33ad3654ab9129b 290 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 5 285 1.2E-93 T 14-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 PhaeoP54_02790 2ccb82d08682a531b33ad3654ab9129b 290 SMART SM01130 1 288 1.2E-136 T 14-10-2018 IPR002220 DapA-like GO:0016829 PhaeoP54_00370 ebce70dd96e7f80471ccc64c1cf3a509 198 Gene3D G3DSA:3.30.420.40 3 121 2.2E-32 T 14-10-2018 PhaeoP54_00370 ebce70dd96e7f80471ccc64c1cf3a509 198 SUPERFAMILY SSF53067 7 103 3.84E-26 T 14-10-2018 PhaeoP54_00370 ebce70dd96e7f80471ccc64c1cf3a509 198 Pfam PF00814 Glycoprotease family 35 107 3.6E-17 T 14-10-2018 IPR000905 Gcp-like domain PhaeoP54_00370 ebce70dd96e7f80471ccc64c1cf3a509 198 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 7 181 2.0E-35 T 14-10-2018 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB GO:0002949 PhaeoP54_03741 9a72936fbd4093e7a7527ed5e3634991 252 SUPERFAMILY SSF56436 64 250 1.27E-33 T 14-10-2018 IPR016187 C-type lectin fold PhaeoP54_03741 9a72936fbd4093e7a7527ed5e3634991 252 Pfam PF03781 Sulfatase-modifying factor enzyme 1 63 248 1.6E-25 T 14-10-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 PhaeoP54_03741 9a72936fbd4093e7a7527ed5e3634991 252 Gene3D G3DSA:3.90.1580.10 54 251 2.0E-20 T 14-10-2018 PhaeoP54_01301 2adb6174daabadcfc99f5733f66e9825 433 SUPERFAMILY SSF53850 25 406 5.43E-76 T 14-10-2018 PhaeoP54_01301 2adb6174daabadcfc99f5733f66e9825 433 Gene3D G3DSA:3.40.190.10 42 392 1.8E-148 T 14-10-2018 PhaeoP54_01301 2adb6174daabadcfc99f5733f66e9825 433 Gene3D G3DSA:3.40.190.10 137 421 1.8E-148 T 14-10-2018 PhaeoP54_01301 2adb6174daabadcfc99f5733f66e9825 433 Pfam PF01547 Bacterial extracellular solute-binding protein 41 325 4.0E-51 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein PhaeoP54_00010 d1d4ec60b2bea673c8e7bfc590c7d3a8 284 Pfam PF00892 EamA-like transporter family 1 123 4.6E-9 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 PhaeoP54_00010 d1d4ec60b2bea673c8e7bfc590c7d3a8 284 SUPERFAMILY SSF103481 28 126 6.15E-10 T 14-10-2018 PhaeoP54_00010 d1d4ec60b2bea673c8e7bfc590c7d3a8 284 SUPERFAMILY SSF103481 173 271 8.24E-6 T 14-10-2018 PhaeoP54_03514 f36846a1475cdb877426d8d1830cbed5 246 Hamap MF_00415 Flagellar L-ring protein [flgH]. 1 244 23.715 T 14-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 PhaeoP54_03514 f36846a1475cdb877426d8d1830cbed5 246 PRINTS PR01008 Flagellar L-ring protein signature 186 202 4.0E-22 T 14-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 PhaeoP54_03514 f36846a1475cdb877426d8d1830cbed5 246 PRINTS PR01008 Flagellar L-ring protein signature 81 93 4.0E-22 T 14-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 PhaeoP54_03514 f36846a1475cdb877426d8d1830cbed5 246 PRINTS PR01008 Flagellar L-ring protein signature 160 175 4.0E-22 T 14-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 PhaeoP54_03514 f36846a1475cdb877426d8d1830cbed5 246 PRINTS PR01008 Flagellar L-ring protein signature 223 237 4.0E-22 T 14-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 PhaeoP54_03514 f36846a1475cdb877426d8d1830cbed5 246 PRINTS PR01008 Flagellar L-ring protein signature 207 221 4.0E-22 T 14-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 PhaeoP54_03514 f36846a1475cdb877426d8d1830cbed5 246 Pfam PF02107 Flagellar L-ring protein 62 245 5.7E-53 T 14-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 PhaeoP54_03094 d4d66269443416f28df6ed26131c8859 217 Pfam PF09835 Uncharacterized protein conserved in bacteria (DUF2062) 27 193 7.3E-42 T 14-10-2018 IPR018639 Domain of unknown function DUF2062 PhaeoP54_01231 5eb44ee6940d4bd275c54ac8f0d5e2fe 335 Pfam PF12833 Helix-turn-helix domain 254 332 1.8E-23 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PhaeoP54_01231 5eb44ee6940d4bd275c54ac8f0d5e2fe 335 SUPERFAMILY SSF46689 231 279 1.97E-6 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PhaeoP54_01231 5eb44ee6940d4bd275c54ac8f0d5e2fe 335 SMART SM00342 248 331 1.6E-23 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PhaeoP54_01231 5eb44ee6940d4bd275c54ac8f0d5e2fe 335 Gene3D G3DSA:1.10.10.60 228 333 3.8E-30 T 14-10-2018 PhaeoP54_01231 5eb44ee6940d4bd275c54ac8f0d5e2fe 335 SUPERFAMILY SSF52317 24 209 7.56E-39 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like PhaeoP54_01231 5eb44ee6940d4bd275c54ac8f0d5e2fe 335 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 300 315 1.1E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PhaeoP54_01231 5eb44ee6940d4bd275c54ac8f0d5e2fe 335 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 315 331 1.1E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PhaeoP54_01231 5eb44ee6940d4bd275c54ac8f0d5e2fe 335 Pfam PF01965 DJ-1/PfpI family 59 191 1.9E-8 T 14-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 PhaeoP54_01231 5eb44ee6940d4bd275c54ac8f0d5e2fe 335 SUPERFAMILY SSF46689 284 333 3.76E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PhaeoP54_01231 5eb44ee6940d4bd275c54ac8f0d5e2fe 335 Gene3D G3DSA:3.40.50.880 21 218 7.4E-45 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like PhaeoP54_00056 a0b66edf7bfa92222a855185416e5e97 485 SUPERFAMILY SSF53720 14 481 1.44E-153 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 PhaeoP54_00056 a0b66edf7bfa92222a855185416e5e97 485 Pfam PF00171 Aldehyde dehydrogenase family 20 480 1.4E-156 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 PhaeoP54_00056 a0b66edf7bfa92222a855185416e5e97 485 Gene3D G3DSA:3.40.605.10 31 474 8.8E-167 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 PhaeoP54_00056 a0b66edf7bfa92222a855185416e5e97 485 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 255 262 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 PhaeoP54_00056 a0b66edf7bfa92222a855185416e5e97 485 Gene3D G3DSA:3.40.309.10 259 449 8.8E-167 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 PhaeoP54_02619 33ebb58ad3420fadd8648b771d43e1cd 344 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 2 25 4.4E-4 T 14-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal PhaeoP54_02619 33ebb58ad3420fadd8648b771d43e1cd 344 SUPERFAMILY SSF53850 151 228 1.57E-7 T 14-10-2018 PhaeoP54_02619 33ebb58ad3420fadd8648b771d43e1cd 344 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 52 316 2.0E-22 T 14-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 PhaeoP54_02619 33ebb58ad3420fadd8648b771d43e1cd 344 Gene3D G3DSA:3.40.190.170 30 344 4.5E-121 T 14-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily PhaeoP54_03601 31dbbfec495c49bab7c70e7293f362dd 317 SUPERFAMILY SSF53448 2 237 4.88E-29 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PhaeoP54_03601 31dbbfec495c49bab7c70e7293f362dd 317 Pfam PF00535 Glycosyl transferase family 2 6 170 5.0E-19 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 PhaeoP54_03601 31dbbfec495c49bab7c70e7293f362dd 317 Gene3D G3DSA:3.90.550.10 1 222 1.2E-22 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PhaeoP54_00386 1bbb5e05f24fddbdf322ae3164adcc14 154 Gene3D G3DSA:3.10.129.10 21 153 1.6E-28 T 14-10-2018 PhaeoP54_00386 1bbb5e05f24fddbdf322ae3164adcc14 154 Pfam PF03061 Thioesterase superfamily 64 141 1.2E-10 T 14-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 PhaeoP54_00386 1bbb5e05f24fddbdf322ae3164adcc14 154 SUPERFAMILY SSF54637 31 150 3.15E-26 T 14-10-2018 IPR029069 HotDog domain superfamily PhaeoP54_00386 1bbb5e05f24fddbdf322ae3164adcc14 154 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 44 148 1.9E-13 T 14-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 PhaeoP54_01498 126a6f4b88a96e52d5a5e79acbd4a2e5 489 PIRSF PIRSF006615 1 489 7.7E-152 T 14-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 PhaeoP54_01498 126a6f4b88a96e52d5a5e79acbd4a2e5 489 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 281 297 2.1E-43 T 14-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 PhaeoP54_01498 126a6f4b88a96e52d5a5e79acbd4a2e5 489 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 254 273 2.1E-43 T 14-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 PhaeoP54_01498 126a6f4b88a96e52d5a5e79acbd4a2e5 489 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 321 340 2.1E-43 T 14-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 PhaeoP54_01498 126a6f4b88a96e52d5a5e79acbd4a2e5 489 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 367 384 2.1E-43 T 14-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 PhaeoP54_01498 126a6f4b88a96e52d5a5e79acbd4a2e5 489 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 141 161 2.1E-43 T 14-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 PhaeoP54_01498 126a6f4b88a96e52d5a5e79acbd4a2e5 489 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 390 411 2.1E-43 T 14-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 PhaeoP54_01498 126a6f4b88a96e52d5a5e79acbd4a2e5 489 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 435 453 2.1E-43 T 14-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 PhaeoP54_01498 126a6f4b88a96e52d5a5e79acbd4a2e5 489 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 234 253 2.1E-43 T 14-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 PhaeoP54_01498 126a6f4b88a96e52d5a5e79acbd4a2e5 489 Pfam PF02074 Carboxypeptidase Taq (M32) metallopeptidase 25 483 5.7E-74 T 14-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 PhaeoP54_01498 126a6f4b88a96e52d5a5e79acbd4a2e5 489 Gene3D G3DSA:1.10.1370.30 1 487 2.8E-167 T 14-10-2018 PhaeoP54_01498 126a6f4b88a96e52d5a5e79acbd4a2e5 489 SUPERFAMILY SSF55486 1 483 2.32E-110 T 14-10-2018 PhaeoP54_02888 fe7459ed978716c8a78b0447c2611f56 344 Gene3D G3DSA:3.20.20.210 1 343 4.0E-120 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 PhaeoP54_02888 fe7459ed978716c8a78b0447c2611f56 344 SUPERFAMILY SSF51726 4 342 1.62E-106 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 PhaeoP54_02888 fe7459ed978716c8a78b0447c2611f56 344 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 20 29 - T 14-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 PhaeoP54_02888 fe7459ed978716c8a78b0447c2611f56 344 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 4 342 2.0E-110 T 14-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 PhaeoP54_02888 fe7459ed978716c8a78b0447c2611f56 344 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 4 344 43.082 T 14-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 PhaeoP54_02888 fe7459ed978716c8a78b0447c2611f56 344 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 7 342 7.4E-124 T 14-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 PhaeoP54_02888 fe7459ed978716c8a78b0447c2611f56 344 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 140 156 - T 14-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 PhaeoP54_03008 3c2b3841f7bb9024038142e84dab7de6 156 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 27 148 5.4E-32 T 14-10-2018 IPR021131 Ribosomal protein L18e/L15P PhaeoP54_03008 3c2b3841f7bb9024038142e84dab7de6 156 Gene3D G3DSA:3.100.10.10 67 151 3.3E-16 T 14-10-2018 PhaeoP54_03008 3c2b3841f7bb9024038142e84dab7de6 156 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 150 18.636 T 14-10-2018 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 PhaeoP54_03008 3c2b3841f7bb9024038142e84dab7de6 156 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 2 147 1.9E-43 T 14-10-2018 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PhaeoP54_03008 3c2b3841f7bb9024038142e84dab7de6 156 SUPERFAMILY SSF52080 4 147 1.83E-40 T 14-10-2018 IPR036227 Ribosomal L18e/L15P superfamily PhaeoP54_01479 ba0d1ea184a5b0e2403897a8d91df045 407 SUPERFAMILY SSF103473 14 395 1.31E-47 T 14-10-2018 IPR036259 MFS transporter superfamily PhaeoP54_01479 ba0d1ea184a5b0e2403897a8d91df045 407 Pfam PF07690 Major Facilitator Superfamily 19 361 1.2E-35 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PhaeoP54_01479 ba0d1ea184a5b0e2403897a8d91df045 407 ProSitePatterns PS00216 Sugar transport proteins signature 1. 69 86 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 PhaeoP54_01479 ba0d1ea184a5b0e2403897a8d91df045 407 Gene3D G3DSA:1.20.1720.10 14 398 2.3E-78 T 14-10-2018 PhaeoP54_03896 6729ce50639e647b5e40bd4775bffe73 158 Pfam PF03734 L,D-transpeptidase catalytic domain 32 156 1.2E-15 T 14-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 PhaeoP54_03896 6729ce50639e647b5e40bd4775bffe73 158 SUPERFAMILY SSF141523 31 157 1.31E-21 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like PhaeoP54_03896 6729ce50639e647b5e40bd4775bffe73 158 Gene3D G3DSA:2.40.440.10 22 158 1.6E-13 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like PhaeoP54_01902 9464dda1eea45995f47445c5bc04cd80 938 SUPERFAMILY SSF81593 788 925 3.14E-23 T 14-10-2018 PhaeoP54_01902 9464dda1eea45995f47445c5bc04cd80 938 Gene3D G3DSA:3.30.460.100 535 771 9.2E-60 T 14-10-2018 PhaeoP54_01902 9464dda1eea45995f47445c5bc04cd80 938 Gene3D G3DSA:3.30.460.100 40 279 7.2E-55 T 14-10-2018 PhaeoP54_01902 9464dda1eea45995f47445c5bc04cd80 938 SUPERFAMILY SSF81593 285 437 2.12E-37 T 14-10-2018 PhaeoP54_01902 9464dda1eea45995f47445c5bc04cd80 938 Gene3D G3DSA:1.20.120.330 283 440 4.1E-44 T 14-10-2018 PhaeoP54_01902 9464dda1eea45995f47445c5bc04cd80 938 Gene3D G3DSA:1.20.120.330 788 931 1.3E-10 T 14-10-2018 PhaeoP54_01902 9464dda1eea45995f47445c5bc04cd80 938 SUPERFAMILY SSF81301 498 759 2.36E-69 T 14-10-2018 PhaeoP54_01902 9464dda1eea45995f47445c5bc04cd80 938 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 41 275 1.4E-53 T 14-10-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 PhaeoP54_01902 9464dda1eea45995f47445c5bc04cd80 938 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 527 761 5.0E-56 T 14-10-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 PhaeoP54_01902 9464dda1eea45995f47445c5bc04cd80 938 Pfam PF08335 GlnD PII-uridylyltransferase 296 437 6.6E-34 T 14-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 PhaeoP54_01902 9464dda1eea45995f47445c5bc04cd80 938 Pfam PF08335 GlnD PII-uridylyltransferase 811 920 1.4E-5 T 14-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 PhaeoP54_01902 9464dda1eea45995f47445c5bc04cd80 938 SUPERFAMILY SSF81301 11 284 1.51E-62 T 14-10-2018 PhaeoP54_03760 0084b5b5295ce0ae1faf9dd6fd9c603e 482 Gene3D G3DSA:3.40.605.10 13 470 1.1E-144 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 PhaeoP54_03760 0084b5b5295ce0ae1faf9dd6fd9c603e 482 Gene3D G3DSA:3.40.309.10 254 446 1.1E-144 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 PhaeoP54_03760 0084b5b5295ce0ae1faf9dd6fd9c603e 482 SUPERFAMILY SSF53720 4 479 1.83E-144 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 PhaeoP54_03760 0084b5b5295ce0ae1faf9dd6fd9c603e 482 Pfam PF00171 Aldehyde dehydrogenase family 13 474 4.7E-148 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 PhaeoP54_01070 cd861d58601da44f3e5465e6f338525c 624 Pfam PF00691 OmpA family 511 607 7.5E-17 T 14-10-2018 IPR006665 OmpA-like domain PhaeoP54_01070 cd861d58601da44f3e5465e6f338525c 624 SUPERFAMILY SSF103088 503 613 4.05E-20 T 14-10-2018 IPR036737 OmpA-like domain superfamily PhaeoP54_01070 cd861d58601da44f3e5465e6f338525c 624 Gene3D G3DSA:3.30.1330.60 480 621 3.5E-24 T 14-10-2018 IPR036737 OmpA-like domain superfamily PhaeoP54_03293 3b13bd0341b78c42983fe0e4888a2976 470 Gene3D G3DSA:3.30.70.1230 261 463 5.1E-50 T 14-10-2018 IPR029787 Nucleotide cyclase PhaeoP54_03293 3b13bd0341b78c42983fe0e4888a2976 470 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 265 425 4.5E-31 T 14-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 PhaeoP54_03293 3b13bd0341b78c42983fe0e4888a2976 470 SMART SM00044 237 434 4.4E-23 T 14-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 PhaeoP54_03293 3b13bd0341b78c42983fe0e4888a2976 470 SUPERFAMILY SSF55073 265 457 4.08E-50 T 14-10-2018 IPR029787 Nucleotide cyclase PhaeoP54_03446 1eb54bb0e63de62b29b01d64d0a73fc2 204 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 8 196 23.821 T 14-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 PhaeoP54_03446 1eb54bb0e63de62b29b01d64d0a73fc2 204 SUPERFAMILY SSF53335 9 180 7.17E-35 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PhaeoP54_03446 1eb54bb0e63de62b29b01d64d0a73fc2 204 Gene3D G3DSA:3.40.50.150 3 199 9.2E-52 T 14-10-2018 PhaeoP54_03446 1eb54bb0e63de62b29b01d64d0a73fc2 204 PIRSF PIRSF003078 4 199 1.5E-45 T 14-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 PhaeoP54_03446 1eb54bb0e63de62b29b01d64d0a73fc2 204 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 19 185 6.1E-39 T 14-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 PhaeoP54_03446 1eb54bb0e63de62b29b01d64d0a73fc2 204 Pfam PF02527 rRNA small subunit methyltransferase G 17 184 1.1E-39 T 14-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 PhaeoP54_02319 656f11086a787c807e95e5849315f233 473 Pfam PF00919 Uncharacterized protein family UPF0004 36 109 1.3E-17 T 14-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 PhaeoP54_02319 656f11086a787c807e95e5849315f233 473 Pfam PF04055 Radical SAM superfamily 169 351 9.7E-25 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 PhaeoP54_02319 656f11086a787c807e95e5849315f233 473 SMART SM00729 163 394 1.7E-37 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 PhaeoP54_02319 656f11086a787c807e95e5849315f233 473 Gene3D G3DSA:3.80.30.20 161 408 5.8E-63 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe PhaeoP54_02319 656f11086a787c807e95e5849315f233 473 TIGRFAM TIGR01125 TIGR01125: ribosomal protein S12 methylthiotransferase RimO 34 469 1.2E-160 T 14-10-2018 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 PhaeoP54_02319 656f11086a787c807e95e5849315f233 473 SUPERFAMILY SSF102114 142 398 2.62E-42 T 14-10-2018 PhaeoP54_02319 656f11086a787c807e95e5849315f233 473 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 35 469 1.6E-93 T 14-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 PhaeoP54_02319 656f11086a787c807e95e5849315f233 473 Gene3D G3DSA:3.40.50.12160 33 151 1.1E-25 T 14-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily PhaeoP54_02319 656f11086a787c807e95e5849315f233 473 Gene3D G3DSA:2.40.50.140 409 473 1.6E-16 T 14-10-2018 PhaeoP54_02319 656f11086a787c807e95e5849315f233 473 Hamap MF_01865 Ribosomal protein S12 methylthiotransferase RimO [rimO]. 32 471 58.932 T 14-10-2018 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 PhaeoP54_03861 60f9dfafd323dbad47e087611ec68539 269 SUPERFAMILY SSF101082 30 249 5.89E-28 T 14-10-2018 PhaeoP54_03861 60f9dfafd323dbad47e087611ec68539 269 Gene3D G3DSA:1.20.58.430 51 243 9.2E-16 T 14-10-2018 IPR023220 Type IV secretion system, VirB5-domain PhaeoP54_03861 60f9dfafd323dbad47e087611ec68539 269 Pfam PF07996 Type IV secretion system proteins 30 238 6.7E-17 T 14-10-2018 IPR014158 Type IV secretion system, VirB5 PhaeoP54_03927 4c1519cbfe1a28b325f6f82ca94f67ae 252 Pfam PF00005 ABC transporter 17 164 1.7E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PhaeoP54_03927 4c1519cbfe1a28b325f6f82ca94f67ae 252 SUPERFAMILY SSF52540 2 227 1.13E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_03927 4c1519cbfe1a28b325f6f82ca94f67ae 252 SMART SM00382 26 213 1.7E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_03927 4c1519cbfe1a28b325f6f82ca94f67ae 252 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PhaeoP54_03927 4c1519cbfe1a28b325f6f82ca94f67ae 252 Gene3D G3DSA:3.40.50.300 1 247 3.9E-66 T 14-10-2018 PhaeoP54_00211 e6b336b6017a6ac06c515443f40f26a9 413 Gene3D G3DSA:1.20.1250.20 14 393 1.1E-42 T 14-10-2018 PhaeoP54_00211 e6b336b6017a6ac06c515443f40f26a9 413 ProSitePatterns PS00216 Sugar transport proteins signature 1. 74 90 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 PhaeoP54_00211 e6b336b6017a6ac06c515443f40f26a9 413 SUPERFAMILY SSF103473 14 393 1.06E-43 T 14-10-2018 IPR036259 MFS transporter superfamily PhaeoP54_00211 e6b336b6017a6ac06c515443f40f26a9 413 Pfam PF07690 Major Facilitator Superfamily 21 359 7.4E-35 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PhaeoP54_00140 220b175687178def4ee7a38ab3d4cad3 1149 Pfam PF13641 Glycosyltransferase like family 2 771 991 1.1E-32 T 14-10-2018 PhaeoP54_00140 220b175687178def4ee7a38ab3d4cad3 1149 SUPERFAMILY SSF88713 493 695 3.71E-45 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 PhaeoP54_00140 220b175687178def4ee7a38ab3d4cad3 1149 SUPERFAMILY SSF51445 217 424 1.97E-6 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily PhaeoP54_00140 220b175687178def4ee7a38ab3d4cad3 1149 Gene3D G3DSA:3.20.20.370 491 699 1.4E-48 T 14-10-2018 PhaeoP54_00140 220b175687178def4ee7a38ab3d4cad3 1149 Pfam PF01522 Polysaccharide deacetylase 496 603 7.3E-25 T 14-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 PhaeoP54_00140 220b175687178def4ee7a38ab3d4cad3 1149 Gene3D G3DSA:3.90.550.10 756 985 1.8E-48 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PhaeoP54_00140 220b175687178def4ee7a38ab3d4cad3 1149 SUPERFAMILY SSF53448 771 1024 1.75E-56 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PhaeoP54_00714 6f6db20200dc61cf4ab123fbd77dd737 95 Gene3D G3DSA:3.30.1050.10 1 95 4.2E-20 T 14-10-2018 IPR036527 SCP2 sterol-binding domain superfamily PhaeoP54_00714 6f6db20200dc61cf4ab123fbd77dd737 95 Pfam PF02036 SCP-2 sterol transfer family 21 94 7.3E-18 T 14-10-2018 IPR003033 SCP2 sterol-binding domain PhaeoP54_00714 6f6db20200dc61cf4ab123fbd77dd737 95 SUPERFAMILY SSF55718 6 94 6.22E-24 T 14-10-2018 IPR036527 SCP2 sterol-binding domain superfamily PhaeoP54_00459 4b2cdd91da6944bdc39e650109c00c39 217 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 6 210 3.0E-45 T 14-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 PhaeoP54_00459 4b2cdd91da6944bdc39e650109c00c39 217 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 4 215 39.05 T 14-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 PhaeoP54_00459 4b2cdd91da6944bdc39e650109c00c39 217 SUPERFAMILY SSF51366 5 212 5.02E-62 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 PhaeoP54_00459 4b2cdd91da6944bdc39e650109c00c39 217 Gene3D G3DSA:3.20.20.70 3 214 3.6E-64 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PhaeoP54_02456 6f216638103a2e36b65642ce5150b17b 691 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 5 333 1.8E-78 T 14-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 PhaeoP54_02456 6f216638103a2e36b65642ce5150b17b 691 Gene3D G3DSA:3.20.20.70 2 373 2.5E-115 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PhaeoP54_02456 6f216638103a2e36b65642ce5150b17b 691 SUPERFAMILY SSF51971 338 521 8.83E-41 T 14-10-2018 PhaeoP54_02456 6f216638103a2e36b65642ce5150b17b 691 Gene3D G3DSA:3.40.50.720 381 676 6.5E-111 T 14-10-2018 PhaeoP54_02456 6f216638103a2e36b65642ce5150b17b 691 SUPERFAMILY SSF51905 466 660 1.24E-16 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PhaeoP54_02456 6f216638103a2e36b65642ce5150b17b 691 SUPERFAMILY SSF51395 1 362 9.16E-102 T 14-10-2018 PhaeoP54_02456 6f216638103a2e36b65642ce5150b17b 691 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 628 644 3.4E-9 T 14-10-2018 PhaeoP54_02456 6f216638103a2e36b65642ce5150b17b 691 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 382 401 3.4E-9 T 14-10-2018 PhaeoP54_02456 6f216638103a2e36b65642ce5150b17b 691 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 503 521 3.4E-9 T 14-10-2018 PhaeoP54_02456 6f216638103a2e36b65642ce5150b17b 691 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 629 643 4.3E-5 T 14-10-2018 PhaeoP54_02456 6f216638103a2e36b65642ce5150b17b 691 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 381 403 4.3E-5 T 14-10-2018 PhaeoP54_02456 6f216638103a2e36b65642ce5150b17b 691 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 381 654 1.1E-21 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PhaeoP54_02456 6f216638103a2e36b65642ce5150b17b 691 Gene3D G3DSA:3.50.50.60 475 635 6.5E-111 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PhaeoP54_00062 0cb7aeeefc8df5d19eb72d5ef1fea409 492 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 69 389 3.2E-88 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain PhaeoP54_00062 0cb7aeeefc8df5d19eb72d5ef1fea409 492 Gene3D G3DSA:3.10.105.10 255 464 2.3E-118 T 14-10-2018 PhaeoP54_00062 0cb7aeeefc8df5d19eb72d5ef1fea409 492 Gene3D G3DSA:3.40.190.10 180 473 2.3E-118 T 14-10-2018 PhaeoP54_00062 0cb7aeeefc8df5d19eb72d5ef1fea409 492 SUPERFAMILY SSF53850 21 480 1.25E-125 T 14-10-2018 PhaeoP54_00062 0cb7aeeefc8df5d19eb72d5ef1fea409 492 Gene3D G3DSA:3.90.76.10 35 179 2.3E-118 T 14-10-2018 PhaeoP54_00062 0cb7aeeefc8df5d19eb72d5ef1fea409 492 PIRSF PIRSF002741 4 491 1.1E-99 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 PhaeoP54_03785 ce31bf74411de07b43501308a9494692 799 Gene3D G3DSA:1.10.287.950 433 732 1.7E-79 T 14-10-2018 PhaeoP54_03785 ce31bf74411de07b43501308a9494692 799 SMART SM00304 367 420 2.7E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 PhaeoP54_03785 ce31bf74411de07b43501308a9494692 799 SMART SM00304 430 482 6.3 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 PhaeoP54_03785 ce31bf74411de07b43501308a9494692 799 Gene3D G3DSA:1.10.8.500 367 419 6.2E-12 T 14-10-2018 PhaeoP54_03785 ce31bf74411de07b43501308a9494692 799 SMART SM00283 483 730 4.9E-101 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 PhaeoP54_03785 ce31bf74411de07b43501308a9494692 799 SUPERFAMILY SSF158472 367 417 5.62E-9 T 14-10-2018 PhaeoP54_03785 ce31bf74411de07b43501308a9494692 799 Pfam PF02743 Cache domain 41 329 8.3E-19 T 14-10-2018 IPR033479 Double Cache domain 1 PhaeoP54_03785 ce31bf74411de07b43501308a9494692 799 Gene3D G3DSA:3.30.450.20 211 348 1.3E-8 T 14-10-2018 PhaeoP54_03785 ce31bf74411de07b43501308a9494692 799 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 544 698 2.7E-52 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 PhaeoP54_03785 ce31bf74411de07b43501308a9494692 799 SUPERFAMILY SSF58104 450 732 6.41E-70 T 14-10-2018 PhaeoP54_02828 10c0e8223ef8a3d3de5038a7754b1dd1 152 Pfam PF14588 YjgF/chorismate_mutase-like, putative endoribonuclease 4 143 2.0E-33 T 14-10-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like PhaeoP54_02828 10c0e8223ef8a3d3de5038a7754b1dd1 152 SUPERFAMILY SSF55298 1 151 3.14E-53 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 PhaeoP54_02828 10c0e8223ef8a3d3de5038a7754b1dd1 152 Gene3D G3DSA:3.30.1330.40 1 152 2.3E-60 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 PhaeoP54_02335 73eca0f274fb18a2fe51de0c0919a1b2 407 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 12 40 1.8E-4 T 14-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal PhaeoP54_02335 73eca0f274fb18a2fe51de0c0919a1b2 407 Pfam PF07394 Protein of unknown function (DUF1501) 46 364 3.0E-38 T 14-10-2018 IPR010869 Protein of unknown function DUF1501 PhaeoP54_01227 b6257fb71e79edb7dd6a2c0e911af169 423 SUPERFAMILY SSF56524 59 299 1.15E-71 T 14-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 PhaeoP54_01227 b6257fb71e79edb7dd6a2c0e911af169 423 PRINTS PR00407 Eukaryotic molybdopterin domain signature 220 236 2.6E-14 T 14-10-2018 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 PhaeoP54_01227 b6257fb71e79edb7dd6a2c0e911af169 423 PRINTS PR00407 Eukaryotic molybdopterin domain signature 97 113 2.6E-14 T 14-10-2018 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 PhaeoP54_01227 b6257fb71e79edb7dd6a2c0e911af169 423 PRINTS PR00407 Eukaryotic molybdopterin domain signature 253 266 2.6E-14 T 14-10-2018 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 PhaeoP54_01227 b6257fb71e79edb7dd6a2c0e911af169 423 PRINTS PR00407 Eukaryotic molybdopterin domain signature 237 250 2.6E-14 T 14-10-2018 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 PhaeoP54_01227 b6257fb71e79edb7dd6a2c0e911af169 423 PRINTS PR00407 Eukaryotic molybdopterin domain signature 332 344 2.6E-14 T 14-10-2018 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 PhaeoP54_01227 b6257fb71e79edb7dd6a2c0e911af169 423 Gene3D G3DSA:3.90.420.10 34 293 3.2E-97 T 14-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 PhaeoP54_01227 b6257fb71e79edb7dd6a2c0e911af169 423 Pfam PF03404 Mo-co oxidoreductase dimerisation domain 289 408 1.4E-19 T 14-10-2018 IPR005066 Moybdenum cofactor oxidoreductase, dimerisation GO:0016491|GO:0030151|GO:0055114 Reactome: R-HSA-1614517 PhaeoP54_01227 b6257fb71e79edb7dd6a2c0e911af169 423 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 11 34 7.0E-5 T 14-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal PhaeoP54_01227 b6257fb71e79edb7dd6a2c0e911af169 423 Pfam PF00174 Oxidoreductase molybdopterin binding domain 115 272 3.5E-51 T 14-10-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 PhaeoP54_01227 b6257fb71e79edb7dd6a2c0e911af169 423 TIGRFAM TIGR04555 sulfite_DH_soxC: sulfite dehydrogenase 12 420 7.9E-180 T 14-10-2018 IPR030835 Sulfite dehydrogenase SoxC PhaeoP54_01227 b6257fb71e79edb7dd6a2c0e911af169 423 SUPERFAMILY SSF81296 294 412 1.33E-28 T 14-10-2018 IPR014756 Immunoglobulin E-set PhaeoP54_01227 b6257fb71e79edb7dd6a2c0e911af169 423 Gene3D G3DSA:2.60.40.650 294 423 1.2E-45 T 14-10-2018 PhaeoP54_01227 b6257fb71e79edb7dd6a2c0e911af169 423 Pfam PF10518 TAT (twin-arginine translocation) pathway signal sequence 10 29 4.6E-5 T 14-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal PhaeoP54_03036 23e74db6757d596c4e9fba3e5346541b 237 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 4 205 1.3E-87 T 14-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PhaeoP54_03036 23e74db6757d596c4e9fba3e5346541b 237 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 2 208 37.335 T 14-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PhaeoP54_03036 23e74db6757d596c4e9fba3e5346541b 237 SUPERFAMILY SSF50447 1 217 4.33E-85 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily PhaeoP54_03036 23e74db6757d596c4e9fba3e5346541b 237 ProSitePatterns PS00474 Ribosomal protein L3 signature. 102 125 - T 14-10-2018 IPR019926 Ribosomal protein L3, conserved site PhaeoP54_03036 23e74db6757d596c4e9fba3e5346541b 237 Gene3D G3DSA:2.40.30.10 130 211 2.8E-19 T 14-10-2018 PhaeoP54_03036 23e74db6757d596c4e9fba3e5346541b 237 Pfam PF00297 Ribosomal protein L3 93 182 1.5E-13 T 14-10-2018 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PhaeoP54_03036 23e74db6757d596c4e9fba3e5346541b 237 Gene3D G3DSA:2.40.50.620 32 97 2.7E-27 T 14-10-2018 PhaeoP54_02540 f00ecb195d053c2dabf25eff5e4ff3be 195 SUPERFAMILY SSF110857 9 89 6.67E-7 T 14-10-2018 IPR036568 Gamma-glutamyl cyclotransferase-like superfamily PhaeoP54_02540 f00ecb195d053c2dabf25eff5e4ff3be 195 Pfam PF06094 Gamma-glutamyl cyclotransferase, AIG2-like 12 109 1.3E-4 T 14-10-2018 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like PhaeoP54_02540 f00ecb195d053c2dabf25eff5e4ff3be 195 Gene3D G3DSA:3.10.490.10 3 147 7.0E-8 T 14-10-2018 PhaeoP54_03089 4681e7f7c14af3608e2747112c279f55 301 Pfam PF07650 KH domain 207 284 2.4E-17 T 14-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PhaeoP54_03089 4681e7f7c14af3608e2747112c279f55 301 TIGRFAM TIGR00436 era: GTP-binding protein Era 6 278 1.1E-70 T 14-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PhaeoP54_03089 4681e7f7c14af3608e2747112c279f55 301 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 6 165 2.6E-22 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 PhaeoP54_03089 4681e7f7c14af3608e2747112c279f55 301 Gene3D G3DSA:3.40.50.300 2 184 2.8E-45 T 14-10-2018 PhaeoP54_03089 4681e7f7c14af3608e2747112c279f55 301 SUPERFAMILY SSF54814 180 296 3.04E-38 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 PhaeoP54_03089 4681e7f7c14af3608e2747112c279f55 301 SUPERFAMILY SSF52540 8 202 3.18E-40 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_03089 4681e7f7c14af3608e2747112c279f55 301 Hamap MF_00367 GTPase Era [era]. 3 295 33.045 T 14-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PhaeoP54_03089 4681e7f7c14af3608e2747112c279f55 301 Gene3D G3DSA:3.30.300.20 185 299 1.5E-35 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta PhaeoP54_03089 4681e7f7c14af3608e2747112c279f55 301 Pfam PF01926 50S ribosome-binding GTPase 8 124 5.9E-22 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 PhaeoP54_01087 b3769ea20bc1484ef06be0608895ab17 107 SUPERFAMILY SSF89360 7 96 7.85E-26 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 PhaeoP54_01087 b3769ea20bc1484ef06be0608895ab17 107 Pfam PF01521 Iron-sulphur cluster biosynthesis 6 102 5.5E-18 T 14-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 PhaeoP54_01087 b3769ea20bc1484ef06be0608895ab17 107 Gene3D G3DSA:2.60.300.12 6 107 1.4E-32 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 PhaeoP54_01087 b3769ea20bc1484ef06be0608895ab17 107 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 7 106 1.1E-31 T 14-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 PhaeoP54_01087 b3769ea20bc1484ef06be0608895ab17 107 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 88 105 - T 14-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 PhaeoP54_03768 a0ff0d1559bba4ac051d0d5d18595f82 268 SUPERFAMILY SSF52096 8 266 1.6E-61 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily PhaeoP54_03768 a0ff0d1559bba4ac051d0d5d18595f82 268 Gene3D G3DSA:3.90.226.10 3 209 1.1E-63 T 14-10-2018 PhaeoP54_03768 a0ff0d1559bba4ac051d0d5d18595f82 268 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 109 129 - T 14-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 PhaeoP54_03768 a0ff0d1559bba4ac051d0d5d18595f82 268 Pfam PF00378 Enoyl-CoA hydratase/isomerase 19 259 2.0E-40 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 PhaeoP54_03768 a0ff0d1559bba4ac051d0d5d18595f82 268 Gene3D G3DSA:1.10.12.10 210 268 9.6E-33 T 14-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal PhaeoP54_03381 894d74d2dd1a606cd230b90dfecd9754 271 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 76 254 1.8E-13 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PhaeoP54_03381 894d74d2dd1a606cd230b90dfecd9754 271 SUPERFAMILY SSF161098 4 259 2.49E-52 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_03381 894d74d2dd1a606cd230b90dfecd9754 271 Gene3D G3DSA:1.10.3720.10 10 263 1.0E-45 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_01547 b75948a1c6958c42ec6be8a15b86e233 251 Gene3D G3DSA:3.30.450.80 11 179 1.2E-9 T 14-10-2018 IPR036693 Transcription factor LuxR-like, autoinducer-binding domain superfamily PhaeoP54_01547 b75948a1c6958c42ec6be8a15b86e233 251 SUPERFAMILY SSF46894 168 244 1.26E-13 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PhaeoP54_01547 b75948a1c6958c42ec6be8a15b86e233 251 Pfam PF00196 Bacterial regulatory proteins, luxR family 186 238 6.3E-9 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PhaeoP54_01547 b75948a1c6958c42ec6be8a15b86e233 251 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 186 200 2.7E-6 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PhaeoP54_01547 b75948a1c6958c42ec6be8a15b86e233 251 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 216 228 2.7E-6 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PhaeoP54_01547 b75948a1c6958c42ec6be8a15b86e233 251 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 200 216 2.7E-6 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PhaeoP54_01547 b75948a1c6958c42ec6be8a15b86e233 251 SMART SM00421 183 240 3.8E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PhaeoP54_01547 b75948a1c6958c42ec6be8a15b86e233 251 Pfam PF03472 Autoinducer binding domain 16 173 2.1E-25 T 14-10-2018 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain PhaeoP54_01547 b75948a1c6958c42ec6be8a15b86e233 251 Gene3D G3DSA:1.10.10.10 181 244 5.0E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_01547 b75948a1c6958c42ec6be8a15b86e233 251 SUPERFAMILY SSF75516 3 176 5.75E-19 T 14-10-2018 IPR036693 Transcription factor LuxR-like, autoinducer-binding domain superfamily PhaeoP54_03762 945cbd15bb9c1ab568d73079519ec999 335 Gene3D G3DSA:1.10.10.60 215 323 2.9E-30 T 14-10-2018 PhaeoP54_03762 945cbd15bb9c1ab568d73079519ec999 335 SUPERFAMILY SSF52317 7 197 6.87E-31 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like PhaeoP54_03762 945cbd15bb9c1ab568d73079519ec999 335 SUPERFAMILY SSF46689 271 320 8.98E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PhaeoP54_03762 945cbd15bb9c1ab568d73079519ec999 335 Pfam PF12833 Helix-turn-helix domain 241 319 1.9E-22 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PhaeoP54_03762 945cbd15bb9c1ab568d73079519ec999 335 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 302 318 7.1E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PhaeoP54_03762 945cbd15bb9c1ab568d73079519ec999 335 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 287 302 7.1E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PhaeoP54_03762 945cbd15bb9c1ab568d73079519ec999 335 Gene3D G3DSA:3.40.50.880 4 204 6.7E-38 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like PhaeoP54_03762 945cbd15bb9c1ab568d73079519ec999 335 SUPERFAMILY SSF46689 219 269 1.35E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PhaeoP54_03762 945cbd15bb9c1ab568d73079519ec999 335 SMART SM00342 235 318 2.5E-27 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PhaeoP54_03762 945cbd15bb9c1ab568d73079519ec999 335 Pfam PF01965 DJ-1/PfpI family 28 177 3.7E-9 T 14-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 PhaeoP54_03762 945cbd15bb9c1ab568d73079519ec999 335 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 272 314 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 PhaeoP54_02818 6250f1eabb6a93c790b479cd626b4617 232 Pfam PF03749 Sugar fermentation stimulation protein 13 226 1.2E-71 T 14-10-2018 IPR005224 Sugar fermentation stimulation protein PhaeoP54_02818 6250f1eabb6a93c790b479cd626b4617 232 TIGRFAM TIGR00230 sfsA: sugar fermentation stimulation protein 5 225 1.5E-63 T 14-10-2018 IPR005224 Sugar fermentation stimulation protein PhaeoP54_02818 6250f1eabb6a93c790b479cd626b4617 232 Gene3D G3DSA:2.40.50.580 1 80 1.1E-29 T 14-10-2018 PhaeoP54_02818 6250f1eabb6a93c790b479cd626b4617 232 Gene3D G3DSA:3.40.1350.60 81 232 1.6E-48 T 14-10-2018 PhaeoP54_02818 6250f1eabb6a93c790b479cd626b4617 232 Hamap MF_00095 Sugar fermentation stimulation protein A [sfsA]. 1 232 53.232 T 14-10-2018 IPR005224 Sugar fermentation stimulation protein PhaeoP54_03636 269d31e2dfe34f943b137f1441a0ea55 142 SMART SM00422 2 71 1.7E-29 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PhaeoP54_03636 269d31e2dfe34f943b137f1441a0ea55 142 SUPERFAMILY SSF46955 2 125 1.76E-36 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily PhaeoP54_03636 269d31e2dfe34f943b137f1441a0ea55 142 Pfam PF09278 MerR, DNA binding 45 108 4.9E-21 T 14-10-2018 IPR015358 Transcription regulator MerR, DNA binding PhaeoP54_03636 269d31e2dfe34f943b137f1441a0ea55 142 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 14 27 3.3E-14 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PhaeoP54_03636 269d31e2dfe34f943b137f1441a0ea55 142 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 38 58 3.3E-14 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PhaeoP54_03636 269d31e2dfe34f943b137f1441a0ea55 142 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 3 14 3.3E-14 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PhaeoP54_03636 269d31e2dfe34f943b137f1441a0ea55 142 Gene3D G3DSA:1.10.1660.10 1 126 6.5E-37 T 14-10-2018 PhaeoP54_03636 269d31e2dfe34f943b137f1441a0ea55 142 Pfam PF00376 MerR family regulatory protein 3 40 4.0E-16 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PhaeoP54_00240 075cff1fbdb12216bbb79fdab260f961 462 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 70 88 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site PhaeoP54_00240 075cff1fbdb12216bbb79fdab260f961 462 Pfam PF13403 Hint domain 219 358 2.2E-34 T 14-10-2018 IPR028992 Hedgehog/Intein (Hint) domain PhaeoP54_00240 075cff1fbdb12216bbb79fdab260f961 462 Gene3D G3DSA:2.150.10.10 78 211 4.0E-13 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal PhaeoP54_00240 075cff1fbdb12216bbb79fdab260f961 462 PRINTS PR00313 NodO calcium binding signature 65 73 5.7E-10 T 14-10-2018 PhaeoP54_00240 075cff1fbdb12216bbb79fdab260f961 462 PRINTS PR00313 NodO calcium binding signature 83 91 5.7E-10 T 14-10-2018 PhaeoP54_00240 075cff1fbdb12216bbb79fdab260f961 462 PRINTS PR00313 NodO calcium binding signature 110 119 5.7E-10 T 14-10-2018 PhaeoP54_00240 075cff1fbdb12216bbb79fdab260f961 462 PRINTS PR00313 NodO calcium binding signature 53 64 5.7E-10 T 14-10-2018 PhaeoP54_00240 075cff1fbdb12216bbb79fdab260f961 462 SUPERFAMILY SSF51294 220 363 1.11E-10 T 14-10-2018 IPR036844 Hint domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 PhaeoP54_00240 075cff1fbdb12216bbb79fdab260f961 462 Gene3D G3DSA:2.150.10.10 17 77 5.9E-10 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal PhaeoP54_00240 075cff1fbdb12216bbb79fdab260f961 462 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 79 97 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site PhaeoP54_00240 075cff1fbdb12216bbb79fdab260f961 462 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 101 117 0.38 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_00240 075cff1fbdb12216bbb79fdab260f961 462 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 47 63 0.3 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_00240 075cff1fbdb12216bbb79fdab260f961 462 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 83 99 0.75 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_00240 075cff1fbdb12216bbb79fdab260f961 462 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 65 81 0.033 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_00240 075cff1fbdb12216bbb79fdab260f961 462 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 52 70 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site PhaeoP54_00240 075cff1fbdb12216bbb79fdab260f961 462 SUPERFAMILY SSF51120 12 222 2.49E-24 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal PhaeoP54_03721 ae609e4a36c6feca99805e2440f7750d 181 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 13 22 - T 14-10-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824 PhaeoP54_03721 ae609e4a36c6feca99805e2440f7750d 181 Gene3D G3DSA:3.40.50.1240 8 168 2.4E-32 T 14-10-2018 IPR029033 Histidine phosphatase superfamily PhaeoP54_03721 ae609e4a36c6feca99805e2440f7750d 181 SMART SM00855 10 148 7.7E-20 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 PhaeoP54_03721 ae609e4a36c6feca99805e2440f7750d 181 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 12 154 5.1E-30 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 PhaeoP54_03721 ae609e4a36c6feca99805e2440f7750d 181 PIRSF PIRSF000709 1 148 9.4E-5 T 14-10-2018 PhaeoP54_03721 ae609e4a36c6feca99805e2440f7750d 181 SUPERFAMILY SSF53254 11 173 9.69E-34 T 14-10-2018 IPR029033 Histidine phosphatase superfamily PhaeoP54_01173 b638361ae5b5c30448a6d41e599035fe 365 Gene3D G3DSA:2.60.120.10 244 363 1.8E-22 T 14-10-2018 IPR014710 RmlC-like jelly roll fold PhaeoP54_01173 b638361ae5b5c30448a6d41e599035fe 365 Gene3D G3DSA:2.60.120.10 103 228 7.2E-26 T 14-10-2018 IPR014710 RmlC-like jelly roll fold PhaeoP54_01173 b638361ae5b5c30448a6d41e599035fe 365 SUPERFAMILY SSF51182 100 356 2.68E-31 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily PhaeoP54_01173 b638361ae5b5c30448a6d41e599035fe 365 Pfam PF12852 Cupin 282 343 3.6E-7 T 14-10-2018 IPR032783 AraC-type transcription regulator, ligand-binding domain PhaeoP54_03474 a4cfa8f7efaa90b31d2104434aa6ff23 522 Pfam PF12860 PAS fold 271 382 1.8E-11 T 14-10-2018 PhaeoP54_03474 a4cfa8f7efaa90b31d2104434aa6ff23 522 SUPERFAMILY SSF55785 377 432 1.64E-5 T 14-10-2018 IPR035965 PAS domain superfamily PhaeoP54_00788 deb8b9e2b425f1449cf4af7805b16642 211 Pfam PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP 38 211 6.4E-60 T 14-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 PhaeoP54_00788 deb8b9e2b425f1449cf4af7805b16642 211 TIGRFAM TIGR00708 cobA: cob(I)yrinic acid a,c-diamide adenosyltransferase 38 211 2.9E-63 T 14-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 PhaeoP54_00788 deb8b9e2b425f1449cf4af7805b16642 211 Gene3D G3DSA:3.40.50.300 17 211 1.4E-65 T 14-10-2018 PhaeoP54_00788 deb8b9e2b425f1449cf4af7805b16642 211 Pfam PF12557 Cob(I)alamin adenosyltransferase N terminal 11 32 6.2E-7 T 14-10-2018 IPR025826 Cob(I)alamin adenosyltransferase N-terminal domain KEGG: 00860+2.5.1.17 PhaeoP54_00788 deb8b9e2b425f1449cf4af7805b16642 211 SUPERFAMILY SSF52540 19 211 4.89E-65 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_00788 deb8b9e2b425f1449cf4af7805b16642 211 PIRSF PIRSF015617 12 211 3.6E-69 T 14-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 PhaeoP54_03132 eee2d66dd4805a122307d958df636fb2 664 Gene3D G3DSA:3.40.50.300 1 254 1.5E-30 T 14-10-2018 PhaeoP54_03132 eee2d66dd4805a122307d958df636fb2 664 SUPERFAMILY SSF54211 456 569 7.84E-35 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold PhaeoP54_03132 eee2d66dd4805a122307d958df636fb2 664 Pfam PF00679 Elongation factor G C-terminus 572 654 7.6E-13 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like PhaeoP54_03132 eee2d66dd4805a122307d958df636fb2 664 Gene3D G3DSA:3.30.230.10 456 655 1.2E-61 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PhaeoP54_03132 eee2d66dd4805a122307d958df636fb2 664 SUPERFAMILY SSF54980 381 447 1.08E-7 T 14-10-2018 IPR035647 EF-G domain III/V-like PhaeoP54_03132 eee2d66dd4805a122307d958df636fb2 664 Gene3D G3DSA:3.30.70.240 575 648 1.2E-61 T 14-10-2018 PhaeoP54_03132 eee2d66dd4805a122307d958df636fb2 664 Pfam PF03764 Elongation factor G, domain IV 455 568 6.2E-39 T 14-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 PhaeoP54_03132 eee2d66dd4805a122307d958df636fb2 664 SMART SM00838 571 661 0.0016 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like PhaeoP54_03132 eee2d66dd4805a122307d958df636fb2 664 SMART SM00889 452 569 7.6E-54 T 14-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 PhaeoP54_03132 eee2d66dd4805a122307d958df636fb2 664 Gene3D G3DSA:3.30.70.870 378 450 2.1E-7 T 14-10-2018 PhaeoP54_03132 eee2d66dd4805a122307d958df636fb2 664 Pfam PF00009 Elongation factor Tu GTP binding domain 52 247 1.3E-7 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PhaeoP54_03132 eee2d66dd4805a122307d958df636fb2 664 SUPERFAMILY SSF54980 571 654 1.44E-12 T 14-10-2018 IPR035647 EF-G domain III/V-like PhaeoP54_03132 eee2d66dd4805a122307d958df636fb2 664 SUPERFAMILY SSF52540 1 250 2.34E-38 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_03493 d21b9cb695ee2b07332717b07d55beba 539 ProSitePatterns PS00455 Putative AMP-binding domain signature. 182 193 - T 14-10-2018 IPR020845 AMP-binding, conserved site PhaeoP54_03493 d21b9cb695ee2b07332717b07d55beba 539 Gene3D G3DSA:3.30.300.310 435 536 1.4E-29 T 14-10-2018 PhaeoP54_03493 d21b9cb695ee2b07332717b07d55beba 539 Pfam PF13193 AMP-binding enzyme C-terminal domain 448 522 4.1E-12 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain PhaeoP54_03493 d21b9cb695ee2b07332717b07d55beba 539 Gene3D G3DSA:3.40.50.12780 2 434 5.3E-114 T 14-10-2018 PhaeoP54_03493 d21b9cb695ee2b07332717b07d55beba 539 SUPERFAMILY SSF56801 14 534 4.71E-122 T 14-10-2018 PhaeoP54_03493 d21b9cb695ee2b07332717b07d55beba 539 Pfam PF00501 AMP-binding enzyme 23 439 1.2E-80 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 PhaeoP54_01594 ab2910e1dbe68387f71c0e2e3179b22f 287 PIRSF PIRSF035875 5 286 1.5E-52 T 14-10-2018 IPR017039 Virulence factor BrkB PhaeoP54_01594 ab2910e1dbe68387f71c0e2e3179b22f 287 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 18 278 2.1E-26 T 14-10-2018 IPR017039 Virulence factor BrkB PhaeoP54_01594 ab2910e1dbe68387f71c0e2e3179b22f 287 Pfam PF03631 Virulence factor BrkB 23 278 3.3E-45 T 14-10-2018 IPR017039 Virulence factor BrkB PhaeoP54_00476 41224ba70099ae085fd616764bc4a1ca 232 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 3.5E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_00476 41224ba70099ae085fd616764bc4a1ca 232 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 139 158 3.5E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_00476 41224ba70099ae085fd616764bc4a1ca 232 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 68 79 3.5E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_00476 41224ba70099ae085fd616764bc4a1ca 232 Gene3D G3DSA:3.40.50.720 2 212 3.7E-30 T 14-10-2018 PhaeoP54_00476 41224ba70099ae085fd616764bc4a1ca 232 Pfam PF00106 short chain dehydrogenase 3 178 1.4E-18 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_00476 41224ba70099ae085fd616764bc4a1ca 232 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 173 0.0037 T 14-10-2018 PhaeoP54_00476 41224ba70099ae085fd616764bc4a1ca 232 SUPERFAMILY SSF51735 3 203 1.9E-29 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PhaeoP54_02497 d4e52bf1efa045b828ace051117ac7e1 146 Pfam PF01047 MarR family 36 90 7.6E-13 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PhaeoP54_02497 d4e52bf1efa045b828ace051117ac7e1 146 Gene3D G3DSA:1.10.10.10 1 141 5.6E-36 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_02497 d4e52bf1efa045b828ace051117ac7e1 146 ProSitePatterns PS01117 MarR-type HTH domain signature. 65 99 - T 14-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site PhaeoP54_02497 d4e52bf1efa045b828ace051117ac7e1 146 SMART SM00347 26 126 8.1E-22 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PhaeoP54_02497 d4e52bf1efa045b828ace051117ac7e1 146 SUPERFAMILY SSF46785 5 141 9.93E-34 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_02497 d4e52bf1efa045b828ace051117ac7e1 146 PRINTS PR00598 Bacterial regulatory protein MarR family signature 67 82 3.0E-9 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PhaeoP54_02497 d4e52bf1efa045b828ace051117ac7e1 146 PRINTS PR00598 Bacterial regulatory protein MarR family signature 116 136 3.0E-9 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PhaeoP54_02497 d4e52bf1efa045b828ace051117ac7e1 146 PRINTS PR00598 Bacterial regulatory protein MarR family signature 50 66 3.0E-9 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PhaeoP54_02497 d4e52bf1efa045b828ace051117ac7e1 146 PRINTS PR00598 Bacterial regulatory protein MarR family signature 86 102 3.0E-9 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PhaeoP54_03742 52cb7923c11aa2d75bf6df4cb3d0cae6 202 Pfam PF00440 Bacterial regulatory proteins, tetR family 21 67 1.3E-15 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PhaeoP54_03742 52cb7923c11aa2d75bf6df4cb3d0cae6 202 SUPERFAMILY SSF48498 88 195 1.54E-14 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily PhaeoP54_03742 52cb7923c11aa2d75bf6df4cb3d0cae6 202 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 21 34 2.0E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PhaeoP54_03742 52cb7923c11aa2d75bf6df4cb3d0cae6 202 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 42 65 2.0E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PhaeoP54_03742 52cb7923c11aa2d75bf6df4cb3d0cae6 202 SUPERFAMILY SSF46689 8 84 1.05E-18 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PhaeoP54_03742 52cb7923c11aa2d75bf6df4cb3d0cae6 202 Pfam PF13977 BetI-type transcriptional repressor, C-terminal 109 195 3.4E-7 T 14-10-2018 IPR039538 BetI-type transcriptional repressor, C-terminal PhaeoP54_03742 52cb7923c11aa2d75bf6df4cb3d0cae6 202 Gene3D G3DSA:1.10.357.10 2 195 2.3E-34 T 14-10-2018 PhaeoP54_04048 e6e49de8e7f3b42d241a70e1c87e0a2f 516 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 277 295 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site PhaeoP54_04048 e6e49de8e7f3b42d241a70e1c87e0a2f 516 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 262 279 0.048 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_04048 e6e49de8e7f3b42d241a70e1c87e0a2f 516 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 245 261 21.0 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_04048 e6e49de8e7f3b42d241a70e1c87e0a2f 516 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 396 412 0.0096 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_04048 e6e49de8e7f3b42d241a70e1c87e0a2f 516 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 280 297 8.4E-4 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_04048 e6e49de8e7f3b42d241a70e1c87e0a2f 516 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 341 356 0.0019 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_04048 e6e49de8e7f3b42d241a70e1c87e0a2f 516 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 429 440 4.6 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_04048 e6e49de8e7f3b42d241a70e1c87e0a2f 516 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 306 320 0.63 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_04048 e6e49de8e7f3b42d241a70e1c87e0a2f 516 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 377 394 0.14 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_04048 e6e49de8e7f3b42d241a70e1c87e0a2f 516 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 359 375 0.0064 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_04048 e6e49de8e7f3b42d241a70e1c87e0a2f 516 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 323 339 2.1 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_04048 e6e49de8e7f3b42d241a70e1c87e0a2f 516 Gene3D G3DSA:2.150.10.10 222 305 3.1E-14 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal PhaeoP54_04048 e6e49de8e7f3b42d241a70e1c87e0a2f 516 Gene3D G3DSA:2.150.10.10 356 397 2.4E-6 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal PhaeoP54_04048 e6e49de8e7f3b42d241a70e1c87e0a2f 516 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 401 419 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site PhaeoP54_04048 e6e49de8e7f3b42d241a70e1c87e0a2f 516 Gene3D G3DSA:2.150.10.10 306 355 7.4E-9 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal PhaeoP54_04048 e6e49de8e7f3b42d241a70e1c87e0a2f 516 Gene3D G3DSA:2.150.10.10 398 509 5.4E-17 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal PhaeoP54_04048 e6e49de8e7f3b42d241a70e1c87e0a2f 516 PRINTS PR00313 NodO calcium binding signature 323 331 1.9E-10 T 14-10-2018 PhaeoP54_04048 e6e49de8e7f3b42d241a70e1c87e0a2f 516 PRINTS PR00313 NodO calcium binding signature 341 350 1.9E-10 T 14-10-2018 PhaeoP54_04048 e6e49de8e7f3b42d241a70e1c87e0a2f 516 PRINTS PR00313 NodO calcium binding signature 260 271 1.9E-10 T 14-10-2018 PhaeoP54_04048 e6e49de8e7f3b42d241a70e1c87e0a2f 516 PRINTS PR00313 NodO calcium binding signature 290 298 1.9E-10 T 14-10-2018 PhaeoP54_04048 e6e49de8e7f3b42d241a70e1c87e0a2f 516 SUPERFAMILY SSF51120 308 515 9.72E-30 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal PhaeoP54_04048 e6e49de8e7f3b42d241a70e1c87e0a2f 516 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 392 410 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site PhaeoP54_04048 e6e49de8e7f3b42d241a70e1c87e0a2f 516 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 319 337 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site PhaeoP54_04048 e6e49de8e7f3b42d241a70e1c87e0a2f 516 SUPERFAMILY SSF51120 218 298 6.15E-15 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal PhaeoP54_02075 f0062cbd06729ec3e539ca5c412623d8 403 ProSitePatterns PS00216 Sugar transport proteins signature 1. 70 86 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 PhaeoP54_02075 f0062cbd06729ec3e539ca5c412623d8 403 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 19 391 5.7E-78 T 14-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 PhaeoP54_02075 f0062cbd06729ec3e539ca5c412623d8 403 Pfam PF07690 Major Facilitator Superfamily 21 360 2.4E-43 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PhaeoP54_02075 f0062cbd06729ec3e539ca5c412623d8 403 SUPERFAMILY SSF103473 4 399 8.11E-61 T 14-10-2018 IPR036259 MFS transporter superfamily PhaeoP54_02075 f0062cbd06729ec3e539ca5c412623d8 403 Gene3D G3DSA:1.20.1720.10 17 391 2.0E-88 T 14-10-2018 PhaeoP54_02075 f0062cbd06729ec3e539ca5c412623d8 403 PRINTS PR01035 Tetracycline resistance protein signature 26 42 2.7E-5 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 PhaeoP54_02075 f0062cbd06729ec3e539ca5c412623d8 403 PRINTS PR01035 Tetracycline resistance protein signature 140 162 2.7E-5 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 PhaeoP54_02075 f0062cbd06729ec3e539ca5c412623d8 403 PRINTS PR01035 Tetracycline resistance protein signature 56 75 2.7E-5 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 PhaeoP54_03448 71186d9c4d2629b3509a3f1f8f7443eb 430 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 214 299 2.5E-17 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 PhaeoP54_03448 71186d9c4d2629b3509a3f1f8f7443eb 430 Pfam PF01926 50S ribosome-binding GTPase 215 308 7.5E-22 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 PhaeoP54_03448 71186d9c4d2629b3509a3f1f8f7443eb 430 Gene3D G3DSA:3.40.50.300 214 357 4.9E-89 T 14-10-2018 PhaeoP54_03448 71186d9c4d2629b3509a3f1f8f7443eb 430 SUPERFAMILY SSF52540 69 348 9.03E-33 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_03448 71186d9c4d2629b3509a3f1f8f7443eb 430 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 9 430 4.4E-81 T 14-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 PhaeoP54_03448 71186d9c4d2629b3509a3f1f8f7443eb 430 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 265 280 3.7E-7 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 PhaeoP54_03448 71186d9c4d2629b3509a3f1f8f7443eb 430 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 216 236 3.7E-7 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 PhaeoP54_03448 71186d9c4d2629b3509a3f1f8f7443eb 430 Gene3D G3DSA:3.30.1360.120 1 118 1.3E-33 T 14-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 PhaeoP54_03448 71186d9c4d2629b3509a3f1f8f7443eb 430 Pfam PF12631 MnmE helical domain 120 427 1.1E-45 T 14-10-2018 IPR025867 MnmE, helical domain Reactome: R-HSA-6787450 PhaeoP54_03448 71186d9c4d2629b3509a3f1f8f7443eb 430 SUPERFAMILY SSF116878 118 430 3.01E-42 T 14-10-2018 PhaeoP54_03448 71186d9c4d2629b3509a3f1f8f7443eb 430 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 2 430 29.423 T 14-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 PhaeoP54_03448 71186d9c4d2629b3509a3f1f8f7443eb 430 Gene3D G3DSA:1.20.120.430 119 430 4.9E-89 T 14-10-2018 IPR027368 tRNA modification GTPase MnmE domain 2 Reactome: R-HSA-6787450 PhaeoP54_03448 71186d9c4d2629b3509a3f1f8f7443eb 430 Pfam PF10396 GTP-binding protein TrmE N-terminus 3 117 1.1E-30 T 14-10-2018 IPR018948 GTP-binding protein TrmE, N-terminal Reactome: R-HSA-6787450 PhaeoP54_03400 8b52ac61d314a2d52c5fcc95eb8d44eb 206 Pfam PF04296 Protein of unknown function (DUF448) 16 90 4.2E-23 T 14-10-2018 IPR007393 Domain of unknown function DUF448 PhaeoP54_03400 8b52ac61d314a2d52c5fcc95eb8d44eb 206 Gene3D G3DSA:3.30.1230.10 5 98 1.6E-20 T 14-10-2018 IPR035931 YlxR-like superfamily PhaeoP54_03400 8b52ac61d314a2d52c5fcc95eb8d44eb 206 SUPERFAMILY SSF55315 97 185 1.72E-10 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like PhaeoP54_03400 8b52ac61d314a2d52c5fcc95eb8d44eb 206 SUPERFAMILY SSF64376 13 100 3.01E-25 T 14-10-2018 IPR035931 YlxR-like superfamily PhaeoP54_03400 8b52ac61d314a2d52c5fcc95eb8d44eb 206 Gene3D G3DSA:3.30.1330.30 99 189 4.1E-9 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like PhaeoP54_01232 217d0867ce8e614026e3a0ee0fb1b8e4 210 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 99 110 - T 14-10-2018 IPR018215 ClpP, Ser active site PhaeoP54_01232 217d0867ce8e614026e3a0ee0fb1b8e4 210 PRINTS PR00127 Clp protease catalytic subunit P signature 177 196 5.9E-47 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 PhaeoP54_01232 217d0867ce8e614026e3a0ee0fb1b8e4 210 PRINTS PR00127 Clp protease catalytic subunit P signature 68 88 5.9E-47 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 PhaeoP54_01232 217d0867ce8e614026e3a0ee0fb1b8e4 210 PRINTS PR00127 Clp protease catalytic subunit P signature 99 116 5.9E-47 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 PhaeoP54_01232 217d0867ce8e614026e3a0ee0fb1b8e4 210 PRINTS PR00127 Clp protease catalytic subunit P signature 120 139 5.9E-47 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 PhaeoP54_01232 217d0867ce8e614026e3a0ee0fb1b8e4 210 PRINTS PR00127 Clp protease catalytic subunit P signature 28 43 5.9E-47 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 PhaeoP54_01232 217d0867ce8e614026e3a0ee0fb1b8e4 210 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 121 134 - T 14-10-2018 IPR033135 ClpP, histidine active site PhaeoP54_01232 217d0867ce8e614026e3a0ee0fb1b8e4 210 Gene3D G3DSA:3.90.226.10 4 205 1.1E-80 T 14-10-2018 PhaeoP54_01232 217d0867ce8e614026e3a0ee0fb1b8e4 210 SUPERFAMILY SSF52096 19 203 1.85E-69 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily PhaeoP54_01232 217d0867ce8e614026e3a0ee0fb1b8e4 210 Pfam PF00574 Clp protease 21 201 2.2E-82 T 14-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA PhaeoP54_01232 217d0867ce8e614026e3a0ee0fb1b8e4 210 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 12 202 41.061 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 PhaeoP54_00784 846941bebfc2933357fd87d86af15f95 1081 Pfam PF02514 CobN/Magnesium Chelatase 678 1071 3.7E-110 T 14-10-2018 IPR003672 CobN/magnesium chelatase GO:0009058 PhaeoP54_00784 846941bebfc2933357fd87d86af15f95 1081 Pfam PF02514 CobN/Magnesium Chelatase 171 674 9.6E-131 T 14-10-2018 IPR003672 CobN/magnesium chelatase GO:0009058 PhaeoP54_03663 4d6844e8aa3eee276ccf5b84c5332cf9 386 SMART SM00387 35 137 0.055 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PhaeoP54_03663 4d6844e8aa3eee276ccf5b84c5332cf9 386 SMART SM00387 281 379 6.1E-6 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PhaeoP54_03663 4d6844e8aa3eee276ccf5b84c5332cf9 386 SUPERFAMILY SSF55874 275 377 7.33E-13 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PhaeoP54_03663 4d6844e8aa3eee276ccf5b84c5332cf9 386 Gene3D G3DSA:3.30.450.20 131 237 6.7E-6 T 14-10-2018 PhaeoP54_03663 4d6844e8aa3eee276ccf5b84c5332cf9 386 Pfam PF13581 Histidine kinase-like ATPase domain 257 357 6.1E-10 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PhaeoP54_03663 4d6844e8aa3eee276ccf5b84c5332cf9 386 SMART SM00911 185 275 6.3E-4 T 14-10-2018 IPR011102 Signal transduction histidine kinase, HWE region GO:0004673 PhaeoP54_03663 4d6844e8aa3eee276ccf5b84c5332cf9 386 SUPERFAMILY SSF55874 32 132 8.25E-10 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PhaeoP54_03663 4d6844e8aa3eee276ccf5b84c5332cf9 386 Gene3D G3DSA:3.30.565.10 6 130 4.3E-8 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PhaeoP54_03663 4d6844e8aa3eee276ccf5b84c5332cf9 386 Pfam PF07568 Histidine kinase 185 255 1.5E-14 T 14-10-2018 IPR011495 Signal transduction histidine kinase, subgroup 2, dimerisation and phosphoacceptor domain PhaeoP54_03663 4d6844e8aa3eee276ccf5b84c5332cf9 386 Gene3D G3DSA:3.30.565.10 244 385 5.8E-22 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PhaeoP54_00611 deb9a25ca4649b2b63f705831b0f0341 213 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 125 153 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 PhaeoP54_00611 deb9a25ca4649b2b63f705831b0f0341 213 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 116 151 3.1E-11 T 14-10-2018 IPR001451 Hexapeptide repeat PhaeoP54_00611 deb9a25ca4649b2b63f705831b0f0341 213 Gene3D G3DSA:2.160.10.10 7 211 2.9E-50 T 14-10-2018 PhaeoP54_00611 deb9a25ca4649b2b63f705831b0f0341 213 SUPERFAMILY SSF51161 11 207 1.1E-39 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily PhaeoP54_01971 2a13118e87a21ddead33fbd085cd1778 120 Pfam PF01883 Iron-sulfur cluster assembly protein 27 97 1.3E-17 T 14-10-2018 IPR002744 MIP18 family-like PhaeoP54_01971 2a13118e87a21ddead33fbd085cd1778 120 Gene3D G3DSA:3.30.300.130 17 120 5.9E-34 T 14-10-2018 IPR034904 Fe-S cluster assembly domain superfamily PhaeoP54_01971 2a13118e87a21ddead33fbd085cd1778 120 SUPERFAMILY SSF117916 26 118 1.01E-30 T 14-10-2018 IPR034904 Fe-S cluster assembly domain superfamily PhaeoP54_01971 2a13118e87a21ddead33fbd085cd1778 120 TIGRFAM TIGR02945 SUF_assoc: FeS assembly SUF system protein 23 120 3.9E-45 T 14-10-2018 IPR014291 SUF system FeS cluster assembly associated PhaeoP54_02436 283b4b50747683a1ce6818b18329f7a2 268 SUPERFAMILY SSF51735 6 146 2.5E-19 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PhaeoP54_02436 283b4b50747683a1ce6818b18329f7a2 268 PIRSF PIRSF000193 3 267 1.5E-54 T 14-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 PhaeoP54_02436 283b4b50747683a1ce6818b18329f7a2 268 Gene3D G3DSA:1.10.3730.10 162 267 4.2E-34 T 14-10-2018 PhaeoP54_02436 283b4b50747683a1ce6818b18329f7a2 268 Gene3D G3DSA:3.40.50.720 3 161 1.9E-30 T 14-10-2018 PhaeoP54_02436 283b4b50747683a1ce6818b18329f7a2 268 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 7 264 7.7E-63 T 14-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 PhaeoP54_02436 283b4b50747683a1ce6818b18329f7a2 268 SUPERFAMILY SSF48179 159 266 2.89E-27 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 PhaeoP54_02436 283b4b50747683a1ce6818b18329f7a2 268 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 7 99 2.3E-9 T 14-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal PhaeoP54_02436 283b4b50747683a1ce6818b18329f7a2 268 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 160 264 7.9E-30 T 14-10-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 PhaeoP54_02436 283b4b50747683a1ce6818b18329f7a2 268 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 3 264 21.976 T 14-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 PhaeoP54_00947 e599444e1b92eaace715c1396e6d2bc0 626 TIGRFAM TIGR01651 CobT: cobaltochelatase, CobT subunit 11 611 2.6E-243 T 14-10-2018 IPR006538 Cobalt chelatase, CobT subunit GO:0009236 KEGG: 00860+6.6.1.2|MetaCyc: PWY-7376 PhaeoP54_00947 e599444e1b92eaace715c1396e6d2bc0 626 PIRSF PIRSF031715 1 619 7.0E-260 T 14-10-2018 IPR006538 Cobalt chelatase, CobT subunit GO:0009236 KEGG: 00860+6.6.1.2|MetaCyc: PWY-7376 PhaeoP54_00947 e599444e1b92eaace715c1396e6d2bc0 626 Gene3D G3DSA:3.40.50.410 404 609 1.8E-9 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily PhaeoP54_00947 e599444e1b92eaace715c1396e6d2bc0 626 Pfam PF06213 Cobalamin biosynthesis protein CobT 8 281 5.1E-97 T 14-10-2018 IPR006538 Cobalt chelatase, CobT subunit GO:0009236 KEGG: 00860+6.6.1.2|MetaCyc: PWY-7376 PhaeoP54_00947 e599444e1b92eaace715c1396e6d2bc0 626 SMART SM00327 404 613 3.5E-6 T 14-10-2018 IPR002035 von Willebrand factor, type A PhaeoP54_00947 e599444e1b92eaace715c1396e6d2bc0 626 SUPERFAMILY SSF53300 407 603 1.05E-16 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily PhaeoP54_00947 e599444e1b92eaace715c1396e6d2bc0 626 Pfam PF11775 Cobalamin biosynthesis protein CobT VWA domain 393 609 2.6E-101 T 14-10-2018 IPR025861 Cobalamin biosynthesis protein CobT VWA domain KEGG: 00860+6.6.1.2|MetaCyc: PWY-7376 PhaeoP54_01652 b1a361578b771de9dcf75983d72fa3fc 355 Gene3D G3DSA:2.40.50.140 280 336 8.3E-19 T 14-10-2018 PhaeoP54_01652 b1a361578b771de9dcf75983d72fa3fc 355 SUPERFAMILY SSF52540 4 243 2.86E-85 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_01652 b1a361578b771de9dcf75983d72fa3fc 355 Pfam PF08402 TOBE domain 273 344 1.6E-8 T 14-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 PhaeoP54_01652 b1a361578b771de9dcf75983d72fa3fc 355 SUPERFAMILY SSF50331 236 348 1.05E-23 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal PhaeoP54_01652 b1a361578b771de9dcf75983d72fa3fc 355 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PhaeoP54_01652 b1a361578b771de9dcf75983d72fa3fc 355 Gene3D G3DSA:2.40.50.100 267 352 8.3E-19 T 14-10-2018 PhaeoP54_01652 b1a361578b771de9dcf75983d72fa3fc 355 Pfam PF00005 ABC transporter 19 161 3.3E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PhaeoP54_01652 b1a361578b771de9dcf75983d72fa3fc 355 SMART SM00382 28 211 1.2E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_01652 b1a361578b771de9dcf75983d72fa3fc 355 Gene3D G3DSA:3.40.50.300 1 238 4.7E-76 T 14-10-2018 PhaeoP54_03000 cbe3939a01e4f3ce77919bfe0c80221c 440 Pfam PF16193 AAA C-terminal domain 192 265 1.5E-20 T 14-10-2018 IPR032423 AAA C-terminal domain PhaeoP54_03000 cbe3939a01e4f3ce77919bfe0c80221c 440 SUPERFAMILY SSF52540 18 229 1.74E-42 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_03000 cbe3939a01e4f3ce77919bfe0c80221c 440 Gene3D G3DSA:3.40.50.300 14 171 5.0E-41 T 14-10-2018 PhaeoP54_03000 cbe3939a01e4f3ce77919bfe0c80221c 440 Gene3D G3DSA:1.10.3710.10 344 440 1.2E-27 T 14-10-2018 PhaeoP54_03000 cbe3939a01e4f3ce77919bfe0c80221c 440 SMART SM00382 57 175 1.6E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_03000 cbe3939a01e4f3ce77919bfe0c80221c 440 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 22 151 5.6E-17 T 14-10-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 PhaeoP54_03000 cbe3939a01e4f3ce77919bfe0c80221c 440 Pfam PF12002 MgsA AAA+ ATPase C terminal 266 430 1.1E-65 T 14-10-2018 IPR021886 MgsA AAA+ ATPase C-terminal PhaeoP54_03000 cbe3939a01e4f3ce77919bfe0c80221c 440 Gene3D G3DSA:1.20.272.10 240 343 1.8E-46 T 14-10-2018 PhaeoP54_03000 cbe3939a01e4f3ce77919bfe0c80221c 440 SUPERFAMILY SSF48019 251 435 1.28E-72 T 14-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 PhaeoP54_01558 27c4fab019266d46517393a810b582ab 406 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 253 398 1.5E-25 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PhaeoP54_01558 27c4fab019266d46517393a810b582ab 406 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 358 377 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 PhaeoP54_01558 27c4fab019266d46517393a810b582ab 406 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 31 143 7.6E-35 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 PhaeoP54_01558 27c4fab019266d46517393a810b582ab 406 Gene3D G3DSA:1.20.140.10 254 406 7.3E-39 T 14-10-2018 PhaeoP54_01558 27c4fab019266d46517393a810b582ab 406 SUPERFAMILY SSF56645 18 251 7.46E-77 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 PhaeoP54_01558 27c4fab019266d46517393a810b582ab 406 SUPERFAMILY SSF47203 256 404 2.09E-40 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 PhaeoP54_01558 27c4fab019266d46517393a810b582ab 406 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 147 240 5.2E-21 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 PhaeoP54_01558 27c4fab019266d46517393a810b582ab 406 Gene3D G3DSA:2.40.110.10 146 252 3.4E-37 T 14-10-2018 PhaeoP54_01558 27c4fab019266d46517393a810b582ab 406 Gene3D G3DSA:1.10.540.10 14 145 5.5E-43 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 PhaeoP54_01558 27c4fab019266d46517393a810b582ab 406 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 149 161 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 PhaeoP54_02210 1c0d31f8a53e9d7876bb891d4a9d1517 1106 SUPERFAMILY SSF53448 354 515 3.09E-5 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PhaeoP54_02210 1c0d31f8a53e9d7876bb891d4a9d1517 1106 Pfam PF13704 Glycosyl transferase family 2 362 456 2.8E-21 T 14-10-2018 PhaeoP54_02210 1c0d31f8a53e9d7876bb891d4a9d1517 1106 SUPERFAMILY SSF53448 10 264 9.0E-7 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PhaeoP54_00931 51c22869e860527aa36ae3e7bf08c2c8 365 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 186 351 3.9E-35 T 14-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 PhaeoP54_00931 51c22869e860527aa36ae3e7bf08c2c8 365 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 6 360 30.006 T 14-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 PhaeoP54_00931 51c22869e860527aa36ae3e7bf08c2c8 365 SUPERFAMILY SSF53756 5 360 1.92E-101 T 14-10-2018 PhaeoP54_00931 51c22869e860527aa36ae3e7bf08c2c8 365 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 7 142 3.3E-26 T 14-10-2018 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 PhaeoP54_00931 51c22869e860527aa36ae3e7bf08c2c8 365 Gene3D G3DSA:3.40.50.2000 164 344 4.1E-87 T 14-10-2018 PhaeoP54_00931 51c22869e860527aa36ae3e7bf08c2c8 365 Gene3D G3DSA:3.40.50.2000 7 350 4.1E-87 T 14-10-2018 PhaeoP54_01366 0f4ce1d09ad7e1c1298df31b3c85d40c 243 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 34 48 1.8E-10 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PhaeoP54_01366 0f4ce1d09ad7e1c1298df31b3c85d40c 243 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 48 64 1.8E-10 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PhaeoP54_01366 0f4ce1d09ad7e1c1298df31b3c85d40c 243 Pfam PF07729 FCD domain 108 221 1.3E-14 T 14-10-2018 IPR011711 GntR, C-terminal PhaeoP54_01366 0f4ce1d09ad7e1c1298df31b3c85d40c 243 Gene3D G3DSA:1.10.10.10 1 76 1.1E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_01366 0f4ce1d09ad7e1c1298df31b3c85d40c 243 SUPERFAMILY SSF46785 4 91 3.12E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_01366 0f4ce1d09ad7e1c1298df31b3c85d40c 243 SMART SM00895 105 227 6.7E-11 T 14-10-2018 IPR011711 GntR, C-terminal PhaeoP54_01366 0f4ce1d09ad7e1c1298df31b3c85d40c 243 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 69 3.0E-18 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PhaeoP54_01366 0f4ce1d09ad7e1c1298df31b3c85d40c 243 SUPERFAMILY SSF48008 107 222 3.4E-17 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal PhaeoP54_01366 0f4ce1d09ad7e1c1298df31b3c85d40c 243 SMART SM00345 15 76 1.4E-19 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PhaeoP54_01366 0f4ce1d09ad7e1c1298df31b3c85d40c 243 Gene3D G3DSA:1.20.120.530 88 230 1.1E-17 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal PhaeoP54_01780 66eb5cd73a3c54710c5b4ea118d03383 430 Pfam PF03237 Terminase-like family 38 239 1.7E-21 T 14-10-2018 IPR004921 Terminase large subunit, T4likevirus-type PhaeoP54_01780 66eb5cd73a3c54710c5b4ea118d03383 430 Gene3D G3DSA:3.40.50.300 16 187 1.4E-13 T 14-10-2018 PhaeoP54_01780 66eb5cd73a3c54710c5b4ea118d03383 430 Pfam PF17289 Terminase RNaseH-like domain 261 412 2.0E-11 T 14-10-2018 IPR035421 Terminase, large subunit gp17-like PhaeoP54_02572 fb7957d124fa1eacddcf6121ae115090 286 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 12 213 1.4E-28 T 14-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 PhaeoP54_02572 fb7957d124fa1eacddcf6121ae115090 286 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 12 279 5.7E-61 T 14-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 PhaeoP54_02572 fb7957d124fa1eacddcf6121ae115090 286 SUPERFAMILY SSF53790 11 230 7.98E-73 T 14-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 PhaeoP54_02572 fb7957d124fa1eacddcf6121ae115090 286 Gene3D G3DSA:3.40.1010.10 2 121 1.9E-31 T 14-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 PhaeoP54_02572 fb7957d124fa1eacddcf6121ae115090 286 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 11 232 32.929 T 14-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 PhaeoP54_02572 fb7957d124fa1eacddcf6121ae115090 286 Gene3D G3DSA:3.30.950.10 122 235 4.3E-37 T 14-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 PhaeoP54_02572 fb7957d124fa1eacddcf6121ae115090 286 PIRSF PIRSF005917 2 284 5.2E-88 T 14-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 PhaeoP54_03270 5533fdb3f2f5ae4769c9e4fb3c96fe89 228 Gene3D G3DSA:3.40.50.2300 2 128 1.0E-36 T 14-10-2018 PhaeoP54_03270 5533fdb3f2f5ae4769c9e4fb3c96fe89 228 Gene3D G3DSA:1.10.10.10 129 228 9.8E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_03270 5533fdb3f2f5ae4769c9e4fb3c96fe89 228 Pfam PF00486 Transcriptional regulatory protein, C terminal 152 226 1.2E-20 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PhaeoP54_03270 5533fdb3f2f5ae4769c9e4fb3c96fe89 228 SUPERFAMILY SSF52172 5 133 4.55E-39 T 14-10-2018 IPR011006 CheY-like superfamily PhaeoP54_03270 5533fdb3f2f5ae4769c9e4fb3c96fe89 228 Pfam PF00072 Response regulator receiver domain 7 117 3.1E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PhaeoP54_03270 5533fdb3f2f5ae4769c9e4fb3c96fe89 228 SMART SM00862 151 226 6.7E-17 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PhaeoP54_03270 5533fdb3f2f5ae4769c9e4fb3c96fe89 228 SUPERFAMILY SSF46894 126 226 9.64E-20 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PhaeoP54_03270 5533fdb3f2f5ae4769c9e4fb3c96fe89 228 SMART SM00448 5 117 3.1E-40 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PhaeoP54_01241 018c49e6f9b90a50e9bf3c81cd7cce41 165 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 9 165 8.3E-39 T 14-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 PhaeoP54_01241 018c49e6f9b90a50e9bf3c81cd7cce41 165 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 111 125 1.5E-12 T 14-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 PhaeoP54_01241 018c49e6f9b90a50e9bf3c81cd7cce41 165 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 94 107 1.5E-12 T 14-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 PhaeoP54_01241 018c49e6f9b90a50e9bf3c81cd7cce41 165 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 126 139 1.5E-12 T 14-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 PhaeoP54_01241 018c49e6f9b90a50e9bf3c81cd7cce41 165 Pfam PF00364 Biotin-requiring enzyme 92 164 1.1E-24 T 14-10-2018 IPR000089 Biotin/lipoyl attachment PhaeoP54_01241 018c49e6f9b90a50e9bf3c81cd7cce41 165 Gene3D G3DSA:2.40.50.100 89 165 7.3E-30 T 14-10-2018 PhaeoP54_01241 018c49e6f9b90a50e9bf3c81cd7cce41 165 SUPERFAMILY SSF51230 90 165 3.93E-24 T 14-10-2018 IPR011053 Single hybrid motif PhaeoP54_01241 018c49e6f9b90a50e9bf3c81cd7cce41 165 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 121 138 - T 14-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 PhaeoP54_02670 c26adae1ca850d4fdbce8175af592694 213 SUPERFAMILY SSF89155 20 207 4.06E-47 T 14-10-2018 IPR036411 TorD-like superfamily PhaeoP54_02670 c26adae1ca850d4fdbce8175af592694 213 Gene3D G3DSA:1.10.3480.10 18 211 2.5E-33 T 14-10-2018 PhaeoP54_02670 c26adae1ca850d4fdbce8175af592694 213 Pfam PF02613 Nitrate reductase delta subunit 55 175 7.4E-28 T 14-10-2018 IPR020945 DMSO/Nitrate reductase chaperone PhaeoP54_00104 003211bc70483645ddfd7ba8a526ec99 206 SUPERFAMILY SSF56784 4 194 2.02E-31 T 14-10-2018 IPR036412 HAD-like superfamily PhaeoP54_00104 003211bc70483645ddfd7ba8a526ec99 206 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 97 110 2.2E-7 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 PhaeoP54_00104 003211bc70483645ddfd7ba8a526ec99 206 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 128 144 2.2E-7 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 PhaeoP54_00104 003211bc70483645ddfd7ba8a526ec99 206 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 3 14 2.2E-7 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 PhaeoP54_00104 003211bc70483645ddfd7ba8a526ec99 206 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 146 166 2.2E-7 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 PhaeoP54_00104 003211bc70483645ddfd7ba8a526ec99 206 Gene3D G3DSA:1.10.150.240 19 82 1.1E-32 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 PhaeoP54_00104 003211bc70483645ddfd7ba8a526ec99 206 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 79 181 8.4E-11 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 PhaeoP54_00104 003211bc70483645ddfd7ba8a526ec99 206 Gene3D G3DSA:3.40.50.1000 7 182 1.1E-32 T 14-10-2018 IPR023214 HAD superfamily PhaeoP54_03734 669488c5190d55b3f51e05f86ecc95f8 645 Gene3D G3DSA:3.40.50.410 446 622 1.3E-18 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily PhaeoP54_03734 669488c5190d55b3f51e05f86ecc95f8 645 SMART SM00327 453 642 1.7E-18 T 14-10-2018 IPR002035 von Willebrand factor, type A PhaeoP54_03734 669488c5190d55b3f51e05f86ecc95f8 645 SUPERFAMILY SSF53300 454 641 5.4E-20 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily PhaeoP54_03734 669488c5190d55b3f51e05f86ecc95f8 645 Pfam PF00092 von Willebrand factor type A domain 456 606 1.7E-9 T 14-10-2018 IPR002035 von Willebrand factor, type A PhaeoP54_02419 1376a502d01e6fc200166e5133b46224 490 SUPERFAMILY SSF81442 24 485 1.11E-60 T 14-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PhaeoP54_02419 1376a502d01e6fc200166e5133b46224 490 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 26 456 2.0E-45 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PhaeoP54_02419 1376a502d01e6fc200166e5133b46224 490 Gene3D G3DSA:1.20.210.10 22 490 5.1E-72 T 14-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PhaeoP54_02419 1376a502d01e6fc200166e5133b46224 490 PRINTS PR01165 Cytochrome c oxidase subunit I signature 60 83 2.8E-5 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PhaeoP54_02419 1376a502d01e6fc200166e5133b46224 490 PRINTS PR01165 Cytochrome c oxidase subunit I signature 123 135 2.8E-5 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PhaeoP54_02419 1376a502d01e6fc200166e5133b46224 490 PRINTS PR01165 Cytochrome c oxidase subunit I signature 243 264 2.8E-5 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PhaeoP54_02419 1376a502d01e6fc200166e5133b46224 490 PRINTS PR01165 Cytochrome c oxidase subunit I signature 427 448 2.8E-5 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PhaeoP54_02419 1376a502d01e6fc200166e5133b46224 490 PRINTS PR01165 Cytochrome c oxidase subunit I signature 378 397 2.8E-5 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PhaeoP54_03751 f6790c4c3c1170ef158616ad04690a8e 384 Gene3D G3DSA:3.90.380.10 244 384 4.4E-12 T 14-10-2018 PhaeoP54_03751 f6790c4c3c1170ef158616ad04690a8e 384 SUPERFAMILY SSF50022 8 160 1.57E-40 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 PhaeoP54_03751 f6790c4c3c1170ef158616ad04690a8e 384 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 190 379 3.6E-29 T 14-10-2018 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0044237|GO:0051537|GO:0055114 PhaeoP54_03751 f6790c4c3c1170ef158616ad04690a8e 384 Gene3D G3DSA:3.90.380.10 19 228 7.4E-50 T 14-10-2018 PhaeoP54_03751 f6790c4c3c1170ef158616ad04690a8e 384 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 184 206 2.0E-12 T 14-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 PhaeoP54_03751 f6790c4c3c1170ef158616ad04690a8e 384 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 145 171 2.0E-12 T 14-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 PhaeoP54_03751 f6790c4c3c1170ef158616ad04690a8e 384 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 27 52 2.0E-12 T 14-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 PhaeoP54_03751 f6790c4c3c1170ef158616ad04690a8e 384 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 99 119 2.0E-12 T 14-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 PhaeoP54_03751 f6790c4c3c1170ef158616ad04690a8e 384 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 78 98 2.0E-12 T 14-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 PhaeoP54_03751 f6790c4c3c1170ef158616ad04690a8e 384 Pfam PF00355 Rieske [2Fe-2S] domain 43 123 3.3E-16 T 14-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 PhaeoP54_03751 f6790c4c3c1170ef158616ad04690a8e 384 Gene3D G3DSA:2.102.10.10 40 165 7.4E-50 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 PhaeoP54_03751 f6790c4c3c1170ef158616ad04690a8e 384 SUPERFAMILY SSF55961 162 382 2.12E-42 T 14-10-2018 PhaeoP54_00571 1dd2ba891e3234c4a344c39f4f303fc2 101 PIRSF PIRSF029775 1 101 3.9E-37 T 14-10-2018 IPR008241 Salicylate biosynthesis protein PchB GO:0004106|GO:0009697|GO:0016835 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6406|MetaCyc: PWY-6627|MetaCyc: PWY-7626 PhaeoP54_00571 1dd2ba891e3234c4a344c39f4f303fc2 101 TIGRFAM TIGR01803 CM-like: chorismate mutase related enzymes 13 94 3.7E-24 T 14-10-2018 IPR008241 Salicylate biosynthesis protein PchB GO:0004106|GO:0009697|GO:0016835 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6406|MetaCyc: PWY-6627|MetaCyc: PWY-7626 PhaeoP54_00571 1dd2ba891e3234c4a344c39f4f303fc2 101 SUPERFAMILY SSF48600 6 97 2.14E-25 T 14-10-2018 IPR036263 Chorismate mutase type II superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 PhaeoP54_00571 1dd2ba891e3234c4a344c39f4f303fc2 101 SMART SM00830 17 97 2.1E-27 T 14-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 PhaeoP54_00571 1dd2ba891e3234c4a344c39f4f303fc2 101 Gene3D G3DSA:1.20.59.10 4 101 1.4E-29 T 14-10-2018 IPR036979 Chorismate mutase domain superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 PhaeoP54_00571 1dd2ba891e3234c4a344c39f4f303fc2 101 Pfam PF01817 Chorismate mutase type II 17 94 7.0E-19 T 14-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 PhaeoP54_00967 bcf2419c32ae8e8d7bee7e1cd8b02dcc 397 TIGRFAM TIGR01814 kynureninase: kynureninase 9 380 2.6E-88 T 14-10-2018 IPR010111 Kynureninase GO:0005737|GO:0006569|GO:0009435|GO:0030170|GO:0030429 KEGG: 00380+3.7.1.3|MetaCyc: PWY-5651|MetaCyc: PWY-6309|Reactome: R-HSA-71240 PhaeoP54_00967 bcf2419c32ae8e8d7bee7e1cd8b02dcc 397 Gene3D G3DSA:3.90.1150.10 5 380 5.5E-140 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 PhaeoP54_00967 bcf2419c32ae8e8d7bee7e1cd8b02dcc 397 Gene3D G3DSA:3.40.640.10 29 286 5.5E-140 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PhaeoP54_00967 bcf2419c32ae8e8d7bee7e1cd8b02dcc 397 Pfam PF00266 Aminotransferase class-V 134 334 1.1E-18 T 14-10-2018 IPR000192 Aminotransferase class V domain PhaeoP54_00967 bcf2419c32ae8e8d7bee7e1cd8b02dcc 397 Hamap MF_01970 Kynureninase [kynU]. 1 380 32.983 T 14-10-2018 IPR010111 Kynureninase GO:0005737|GO:0006569|GO:0009435|GO:0030170|GO:0030429 KEGG: 00380+3.7.1.3|MetaCyc: PWY-5651|MetaCyc: PWY-6309|Reactome: R-HSA-71240 PhaeoP54_00967 bcf2419c32ae8e8d7bee7e1cd8b02dcc 397 PIRSF PIRSF038800 2 388 4.1E-137 T 14-10-2018 IPR010111 Kynureninase GO:0005737|GO:0006569|GO:0009435|GO:0030170|GO:0030429 KEGG: 00380+3.7.1.3|MetaCyc: PWY-5651|MetaCyc: PWY-6309|Reactome: R-HSA-71240 PhaeoP54_00967 bcf2419c32ae8e8d7bee7e1cd8b02dcc 397 SUPERFAMILY SSF53383 2 380 1.24E-84 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PhaeoP54_00570 8c43d7fff0a49827539ede91d94c31eb 558 ProSitePatterns PS00721 Formate--tetrahydrofolate ligase signature 1. 105 115 - T 14-10-2018 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 PhaeoP54_00570 8c43d7fff0a49827539ede91d94c31eb 558 Pfam PF01268 Formate--tetrahydrofolate ligase 4 558 1.2E-269 T 14-10-2018 IPR000559 Formate-tetrahydrofolate ligase, FTHFS GO:0004329|GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 PhaeoP54_00570 8c43d7fff0a49827539ede91d94c31eb 558 Hamap MF_01543 Formate--tetrahydrofolate ligase [fhs]. 3 558 48.317 T 14-10-2018 IPR000559 Formate-tetrahydrofolate ligase, FTHFS GO:0004329|GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 PhaeoP54_00570 8c43d7fff0a49827539ede91d94c31eb 558 Gene3D G3DSA:3.40.50.300 8 440 1.3E-207 T 14-10-2018 PhaeoP54_00570 8c43d7fff0a49827539ede91d94c31eb 558 SUPERFAMILY SSF52540 6 556 4.25E-248 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_00570 8c43d7fff0a49827539ede91d94c31eb 558 ProSitePatterns PS00722 Formate--tetrahydrofolate ligase signature 2. 330 341 - T 14-10-2018 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 PhaeoP54_00570 8c43d7fff0a49827539ede91d94c31eb 558 Gene3D G3DSA:3.30.1510.10 131 249 1.3E-207 T 14-10-2018 PhaeoP54_00570 8c43d7fff0a49827539ede91d94c31eb 558 Gene3D G3DSA:3.10.410.10 446 534 1.6E-35 T 14-10-2018 PhaeoP54_02285 c01923eb69ad0e82288379b1b4a7211e 472 Pfam PF02321 Outer membrane efflux protein 50 223 5.3E-18 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 PhaeoP54_02285 c01923eb69ad0e82288379b1b4a7211e 472 Pfam PF02321 Outer membrane efflux protein 242 423 1.7E-26 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 PhaeoP54_02285 c01923eb69ad0e82288379b1b4a7211e 472 SUPERFAMILY SSF56954 9 427 4.45E-72 T 14-10-2018 PhaeoP54_02285 c01923eb69ad0e82288379b1b4a7211e 472 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 31 440 1.8E-79 T 14-10-2018 IPR010130 Type I secretion outer membrane protein, TolC GO:0015562|GO:0019867|GO:0055085 PhaeoP54_02285 c01923eb69ad0e82288379b1b4a7211e 472 Gene3D G3DSA:1.20.1600.10 32 439 2.0E-75 T 14-10-2018 PhaeoP54_02575 17dd0eeaeeb7620a283c5ed763c69020 518 PRINTS PR01806 Virulence factor MviN signature 356 375 5.3E-60 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ PhaeoP54_02575 17dd0eeaeeb7620a283c5ed763c69020 518 PRINTS PR01806 Virulence factor MviN signature 133 157 5.3E-60 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ PhaeoP54_02575 17dd0eeaeeb7620a283c5ed763c69020 518 PRINTS PR01806 Virulence factor MviN signature 258 284 5.3E-60 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ PhaeoP54_02575 17dd0eeaeeb7620a283c5ed763c69020 518 PRINTS PR01806 Virulence factor MviN signature 408 425 5.3E-60 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ PhaeoP54_02575 17dd0eeaeeb7620a283c5ed763c69020 518 PRINTS PR01806 Virulence factor MviN signature 36 55 5.3E-60 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ PhaeoP54_02575 17dd0eeaeeb7620a283c5ed763c69020 518 PRINTS PR01806 Virulence factor MviN signature 157 178 5.3E-60 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ PhaeoP54_02575 17dd0eeaeeb7620a283c5ed763c69020 518 PRINTS PR01806 Virulence factor MviN signature 55 71 5.3E-60 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ PhaeoP54_02575 17dd0eeaeeb7620a283c5ed763c69020 518 PIRSF PIRSF002869 2 512 3.4E-123 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ PhaeoP54_02575 17dd0eeaeeb7620a283c5ed763c69020 518 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 6 493 4.8E-110 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ PhaeoP54_02575 17dd0eeaeeb7620a283c5ed763c69020 518 Hamap MF_02078 Probable lipid II flippase MurJ [murJ]. 6 467 17.063 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ PhaeoP54_02575 17dd0eeaeeb7620a283c5ed763c69020 518 Pfam PF03023 MviN-like protein 32 467 3.6E-93 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ PhaeoP54_01484 9f557d7710db8ad799406660cae95f93 218 ProSitePatterns PS00221 MIP family signature. 64 72 - T 14-10-2018 IPR022357 Major intrinsic protein, conserved site Reactome: R-HSA-432047 PhaeoP54_01484 9f557d7710db8ad799406660cae95f93 218 Gene3D G3DSA:1.20.1080.10 1 218 2.1E-30 T 14-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 PhaeoP54_01484 9f557d7710db8ad799406660cae95f93 218 Pfam PF00230 Major intrinsic protein 3 144 1.4E-21 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 PhaeoP54_01484 9f557d7710db8ad799406660cae95f93 218 SUPERFAMILY SSF81338 3 216 2.09E-39 T 14-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 PhaeoP54_01484 9f557d7710db8ad799406660cae95f93 218 PRINTS PR00783 Major intrinsic protein family signature 4 23 2.9E-21 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 PhaeoP54_01484 9f557d7710db8ad799406660cae95f93 218 PRINTS PR00783 Major intrinsic protein family signature 83 102 2.9E-21 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 PhaeoP54_01484 9f557d7710db8ad799406660cae95f93 218 PRINTS PR00783 Major intrinsic protein family signature 127 145 2.9E-21 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 PhaeoP54_01484 9f557d7710db8ad799406660cae95f93 218 PRINTS PR00783 Major intrinsic protein family signature 46 70 2.9E-21 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 PhaeoP54_02096 4b9ee41e2ad9cfd7066adc3b345d2ff9 462 Gene3D G3DSA:1.25.60.10 19 145 4.8E-18 T 14-10-2018 IPR038076 MgtE, N-terminal domain superfamily PhaeoP54_02096 4b9ee41e2ad9cfd7066adc3b345d2ff9 462 Gene3D G3DSA:3.10.580.10 146 273 5.7E-34 T 14-10-2018 PhaeoP54_02096 4b9ee41e2ad9cfd7066adc3b345d2ff9 462 SMART SM00116 221 269 9.6E-5 T 14-10-2018 IPR000644 CBS domain PhaeoP54_02096 4b9ee41e2ad9cfd7066adc3b345d2ff9 462 SMART SM00116 157 210 8.4 T 14-10-2018 IPR000644 CBS domain PhaeoP54_02096 4b9ee41e2ad9cfd7066adc3b345d2ff9 462 TIGRFAM TIGR00400 mgtE: magnesium transporter 35 461 3.5E-93 T 14-10-2018 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 PhaeoP54_02096 4b9ee41e2ad9cfd7066adc3b345d2ff9 462 Gene3D G3DSA:1.10.357.20 287 461 8.5E-55 T 14-10-2018 IPR038048 Magnesium transporter MgtE, transmembrane domain PhaeoP54_02096 4b9ee41e2ad9cfd7066adc3b345d2ff9 462 Pfam PF00571 CBS domain 224 268 3.4E-5 T 14-10-2018 IPR000644 CBS domain PhaeoP54_02096 4b9ee41e2ad9cfd7066adc3b345d2ff9 462 Pfam PF00571 CBS domain 150 207 3.3E-4 T 14-10-2018 IPR000644 CBS domain PhaeoP54_02096 4b9ee41e2ad9cfd7066adc3b345d2ff9 462 Pfam PF03448 MgtE intracellular N domain 47 148 5.5E-24 T 14-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain PhaeoP54_02096 4b9ee41e2ad9cfd7066adc3b345d2ff9 462 Pfam PF01769 Divalent cation transporter 333 454 4.1E-27 T 14-10-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 PhaeoP54_02096 4b9ee41e2ad9cfd7066adc3b345d2ff9 462 SUPERFAMILY SSF54631 150 283 6.44E-27 T 14-10-2018 PhaeoP54_02096 4b9ee41e2ad9cfd7066adc3b345d2ff9 462 SUPERFAMILY SSF161093 290 461 1.01E-51 T 14-10-2018 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily GO:0006812|GO:0008324 PhaeoP54_02096 4b9ee41e2ad9cfd7066adc3b345d2ff9 462 SMART SM00924 47 150 6.2E-33 T 14-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain PhaeoP54_02096 4b9ee41e2ad9cfd7066adc3b345d2ff9 462 SUPERFAMILY SSF158791 22 147 7.46E-30 T 14-10-2018 PhaeoP54_03487 a8e6d62998c4a39203091407a53c2a36 365 Pfam PF00814 Glycoprotease family 31 324 3.9E-93 T 14-10-2018 IPR000905 Gcp-like domain PhaeoP54_03487 a8e6d62998c4a39203091407a53c2a36 365 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 5 348 59.423 T 14-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 PhaeoP54_03487 a8e6d62998c4a39203091407a53c2a36 365 Gene3D G3DSA:3.30.420.40 136 310 3.5E-114 T 14-10-2018 PhaeoP54_03487 a8e6d62998c4a39203091407a53c2a36 365 SUPERFAMILY SSF53067 7 130 3.04E-28 T 14-10-2018 PhaeoP54_03487 a8e6d62998c4a39203091407a53c2a36 365 SUPERFAMILY SSF53067 109 326 8.68E-41 T 14-10-2018 PhaeoP54_03487 a8e6d62998c4a39203091407a53c2a36 365 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 161 182 2.1E-42 T 14-10-2018 IPR017861 Kae1/TsaD family PhaeoP54_03487 a8e6d62998c4a39203091407a53c2a36 365 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 84 104 2.1E-42 T 14-10-2018 IPR017861 Kae1/TsaD family PhaeoP54_03487 a8e6d62998c4a39203091407a53c2a36 365 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 280 289 2.1E-42 T 14-10-2018 IPR017861 Kae1/TsaD family PhaeoP54_03487 a8e6d62998c4a39203091407a53c2a36 365 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 105 124 2.1E-42 T 14-10-2018 IPR017861 Kae1/TsaD family PhaeoP54_03487 a8e6d62998c4a39203091407a53c2a36 365 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 138 150 2.1E-42 T 14-10-2018 IPR017861 Kae1/TsaD family PhaeoP54_03487 a8e6d62998c4a39203091407a53c2a36 365 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 8 21 2.1E-42 T 14-10-2018 IPR017861 Kae1/TsaD family PhaeoP54_03487 a8e6d62998c4a39203091407a53c2a36 365 Gene3D G3DSA:3.30.420.40 8 332 3.5E-114 T 14-10-2018 PhaeoP54_03487 a8e6d62998c4a39203091407a53c2a36 365 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 8 330 1.1E-119 T 14-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 PhaeoP54_03487 a8e6d62998c4a39203091407a53c2a36 365 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 8 323 2.4E-92 T 14-10-2018 IPR017861 Kae1/TsaD family PhaeoP54_02310 39674dd695691f2811af30d8ea0376cd 172 Pfam PF04945 YHS domain 56 92 9.3E-8 T 14-10-2018 IPR007029 YHS domain PhaeoP54_03151 d18ee1843a5d4d4d7c9a74f9784437fb 146 PRINTS PR00598 Bacterial regulatory protein MarR family signature 121 141 4.2E-9 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PhaeoP54_03151 d18ee1843a5d4d4d7c9a74f9784437fb 146 PRINTS PR00598 Bacterial regulatory protein MarR family signature 72 87 4.2E-9 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PhaeoP54_03151 d18ee1843a5d4d4d7c9a74f9784437fb 146 PRINTS PR00598 Bacterial regulatory protein MarR family signature 91 107 4.2E-9 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PhaeoP54_03151 d18ee1843a5d4d4d7c9a74f9784437fb 146 PRINTS PR00598 Bacterial regulatory protein MarR family signature 55 71 4.2E-9 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PhaeoP54_03151 d18ee1843a5d4d4d7c9a74f9784437fb 146 SMART SM00347 31 131 9.1E-16 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PhaeoP54_03151 d18ee1843a5d4d4d7c9a74f9784437fb 146 SUPERFAMILY SSF46785 2 143 2.0E-27 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_03151 d18ee1843a5d4d4d7c9a74f9784437fb 146 Gene3D G3DSA:1.10.10.10 1 143 4.2E-32 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_03151 d18ee1843a5d4d4d7c9a74f9784437fb 146 Pfam PF12802 MarR family 36 95 6.6E-13 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PhaeoP54_02937 185bc647bcb72c364500b86ff7633a30 195 Pfam PF00440 Bacterial regulatory proteins, tetR family 8 49 1.4E-11 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PhaeoP54_02937 185bc647bcb72c364500b86ff7633a30 195 Gene3D G3DSA:1.10.357.10 1 190 2.0E-59 T 14-10-2018 PhaeoP54_02937 185bc647bcb72c364500b86ff7633a30 195 SUPERFAMILY SSF46689 2 71 2.98E-14 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PhaeoP54_02937 185bc647bcb72c364500b86ff7633a30 195 SUPERFAMILY SSF48498 77 189 2.35E-25 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily PhaeoP54_02937 185bc647bcb72c364500b86ff7633a30 195 Pfam PF16925 Bacterial transcriptional repressor C-terminal 99 181 2.0E-13 T 14-10-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal PhaeoP54_03420 0648939d9a5412b9f28bec6b89bfeabd 612 SUPERFAMILY SSF90123 22 344 1.11E-51 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 PhaeoP54_03420 0648939d9a5412b9f28bec6b89bfeabd 612 Gene3D G3DSA:3.40.50.300 351 604 1.4E-88 T 14-10-2018 PhaeoP54_03420 0648939d9a5412b9f28bec6b89bfeabd 612 SUPERFAMILY SSF52540 351 601 6.76E-85 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_03420 0648939d9a5412b9f28bec6b89bfeabd 612 Pfam PF00664 ABC transporter transmembrane region 44 308 1.5E-18 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 PhaeoP54_03420 0648939d9a5412b9f28bec6b89bfeabd 612 SMART SM00382 386 577 1.9E-20 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_03420 0648939d9a5412b9f28bec6b89bfeabd 612 Gene3D G3DSA:1.20.1560.10 24 344 2.1E-30 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 PhaeoP54_03420 0648939d9a5412b9f28bec6b89bfeabd 612 ProSitePatterns PS00211 ABC transporters family signature. 503 517 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PhaeoP54_03420 0648939d9a5412b9f28bec6b89bfeabd 612 Pfam PF00005 ABC transporter 377 531 3.8E-35 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PhaeoP54_02302 8438d4c8d36b9cc5352898584cb81af0 834 Pfam PF00271 Helicase conserved C-terminal domain 230 347 5.9E-8 T 14-10-2018 IPR001650 Helicase, C-terminal PhaeoP54_02302 8438d4c8d36b9cc5352898584cb81af0 834 SMART SM00487 2 185 2.3E-17 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain PhaeoP54_02302 8438d4c8d36b9cc5352898584cb81af0 834 SUPERFAMILY SSF52540 16 359 3.67E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_02302 8438d4c8d36b9cc5352898584cb81af0 834 Gene3D G3DSA:1.20.120.1080 394 449 1.5E-9 T 14-10-2018 PhaeoP54_02302 8438d4c8d36b9cc5352898584cb81af0 834 Gene3D G3DSA:3.40.50.300 1 178 5.1E-53 T 14-10-2018 PhaeoP54_02302 8438d4c8d36b9cc5352898584cb81af0 834 SMART SM00490 247 348 1.5E-9 T 14-10-2018 IPR001650 Helicase, C-terminal PhaeoP54_02302 8438d4c8d36b9cc5352898584cb81af0 834 PIRSF PIRSF005496 1 834 8.2E-283 T 14-10-2018 PhaeoP54_02302 8438d4c8d36b9cc5352898584cb81af0 834 Pfam PF08482 ATP-dependent helicase C-terminal 692 821 1.8E-49 T 14-10-2018 IPR013689 ATP-dependent RNA helicase HrpB, C-terminal PhaeoP54_02302 8438d4c8d36b9cc5352898584cb81af0 834 SMART SM00847 407 488 2.2E-12 T 14-10-2018 IPR007502 Helicase-associated domain GO:0004386 PhaeoP54_02302 8438d4c8d36b9cc5352898584cb81af0 834 TIGRFAM TIGR01970 DEAH_box_HrpB: ATP-dependent helicase HrpB 4 833 2.6E-270 T 14-10-2018 IPR010225 ATP-dependent helicase HrpB GO:0008026 PhaeoP54_02302 8438d4c8d36b9cc5352898584cb81af0 834 Pfam PF04408 Helicase associated domain (HA2) 408 468 5.2E-10 T 14-10-2018 IPR007502 Helicase-associated domain GO:0004386 PhaeoP54_02302 8438d4c8d36b9cc5352898584cb81af0 834 Gene3D G3DSA:3.40.50.300 179 362 1.5E-43 T 14-10-2018 PhaeoP54_02302 8438d4c8d36b9cc5352898584cb81af0 834 Pfam PF00270 DEAD/DEAH box helicase 13 164 6.8E-7 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 PhaeoP54_02566 63c82e7fe6eaaaabade37395d69cbfa2 172 Pfam PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase 6 167 8.0E-55 T 14-10-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-6269|MetaCyc: PWY-7962|MetaCyc: PWY-7971|MetaCyc: PWY-7972 PhaeoP54_02566 63c82e7fe6eaaaabade37395d69cbfa2 172 SUPERFAMILY SSF52540 6 169 7.98E-50 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_02566 63c82e7fe6eaaaabade37395d69cbfa2 172 PIRSF PIRSF006135 4 171 6.6E-47 T 14-10-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-6269|MetaCyc: PWY-7962|MetaCyc: PWY-7971|MetaCyc: PWY-7972 PhaeoP54_02566 63c82e7fe6eaaaabade37395d69cbfa2 172 Gene3D G3DSA:3.40.50.300 5 169 2.4E-52 T 14-10-2018 PhaeoP54_02715 1bcafc9554020e1c7834b5524f7c592f 801 SMART SM01008 17 124 1.6E-40 T 14-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead PhaeoP54_02715 1bcafc9554020e1c7834b5524f7c592f 801 Gene3D G3DSA:3.90.1170.50 1 124 8.8E-40 T 14-10-2018 PhaeoP54_02715 1bcafc9554020e1c7834b5524f7c592f 801 SUPERFAMILY SSF56003 124 796 2.09E-201 T 14-10-2018 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GO:0016491|GO:0055114 PhaeoP54_02715 1bcafc9554020e1c7834b5524f7c592f 801 Gene3D G3DSA:3.30.365.10 449 789 1.1E-138 T 14-10-2018 PhaeoP54_02715 1bcafc9554020e1c7834b5524f7c592f 801 SUPERFAMILY SSF54665 3 125 1.96E-35 T 14-10-2018 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily PhaeoP54_02715 1bcafc9554020e1c7834b5524f7c592f 801 Gene3D G3DSA:3.30.365.10 485 643 1.1E-138 T 14-10-2018 PhaeoP54_02715 1bcafc9554020e1c7834b5524f7c592f 801 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 17 124 2.7E-27 T 14-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead PhaeoP54_02715 1bcafc9554020e1c7834b5524f7c592f 801 TIGRFAM TIGR02965 xanthine_xdhB: xanthine dehydrogenase, molybdopterin binding subunit 3 797 0.0 T 14-10-2018 IPR014309 Xanthine dehydrogenase, molybdopterin binding subunit GO:0030151 KEGG: 00230+1.17.1.4+1.17.3.2|KEGG: 00232+1.17.3.2|KEGG: 00983+1.17.3.2|MetaCyc: PWY-5497|MetaCyc: PWY-5695|MetaCyc: PWY-6538|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-6999 PhaeoP54_02715 1bcafc9554020e1c7834b5524f7c592f 801 Gene3D G3DSA:3.30.365.10 147 379 7.3E-92 T 14-10-2018 PhaeoP54_02715 1bcafc9554020e1c7834b5524f7c592f 801 Gene3D G3DSA:3.30.365.10 173 267 7.3E-92 T 14-10-2018 PhaeoP54_02715 1bcafc9554020e1c7834b5524f7c592f 801 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 144 729 2.2E-200 T 14-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PhaeoP54_03929 d117eea28a3e8b23bca0ed3f21f36809 163 SUPERFAMILY SSF143744 25 158 2.75E-28 T 14-10-2018 IPR038084 GlcG-like domain superfamily PhaeoP54_03929 d117eea28a3e8b23bca0ed3f21f36809 163 Gene3D G3DSA:3.30.450.150 17 159 7.4E-36 T 14-10-2018 IPR038084 GlcG-like domain superfamily PhaeoP54_03929 d117eea28a3e8b23bca0ed3f21f36809 163 Pfam PF03928 Haem-degrading 30 148 3.6E-23 T 14-10-2018 IPR005624 Haem-degrading PhaeoP54_03269 531b816ecd0860a2ac3535b76acd605f 262 SUPERFAMILY SSF56219 3 262 8.64E-68 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily PhaeoP54_03269 531b816ecd0860a2ac3535b76acd605f 262 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 6 253 5.5E-22 T 14-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase PhaeoP54_03269 531b816ecd0860a2ac3535b76acd605f 262 Gene3D G3DSA:3.60.10.10 4 262 4.4E-58 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily PhaeoP54_03269 531b816ecd0860a2ac3535b76acd605f 262 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 5 261 7.9E-50 T 14-10-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 PhaeoP54_03269 531b816ecd0860a2ac3535b76acd605f 262 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 5 260 9.3E-55 T 14-10-2018 PhaeoP54_03269 531b816ecd0860a2ac3535b76acd605f 262 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 29 38 - T 14-10-2018 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 PhaeoP54_00658 af6b3d14f4b2bfd81dc1ac403cc22a3d 765 PRINTS PR01183 Ribonucleotide reductase large chain signature 421 448 2.1E-25 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 PhaeoP54_00658 af6b3d14f4b2bfd81dc1ac403cc22a3d 765 PRINTS PR01183 Ribonucleotide reductase large chain signature 300 323 2.1E-25 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 PhaeoP54_00658 af6b3d14f4b2bfd81dc1ac403cc22a3d 765 PRINTS PR01183 Ribonucleotide reductase large chain signature 366 389 2.1E-25 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 PhaeoP54_00658 af6b3d14f4b2bfd81dc1ac403cc22a3d 765 PRINTS PR01183 Ribonucleotide reductase large chain signature 338 360 2.1E-25 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 PhaeoP54_00658 af6b3d14f4b2bfd81dc1ac403cc22a3d 765 PRINTS PR01183 Ribonucleotide reductase large chain signature 160 179 2.1E-25 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 PhaeoP54_00658 af6b3d14f4b2bfd81dc1ac403cc22a3d 765 Pfam PF02867 Ribonucleotide reductase, barrel domain 85 551 4.8E-146 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 PhaeoP54_00658 af6b3d14f4b2bfd81dc1ac403cc22a3d 765 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 9 80 4.4E-8 T 14-10-2018 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 PhaeoP54_00658 af6b3d14f4b2bfd81dc1ac403cc22a3d 765 SUPERFAMILY SSF51998 3 567 2.96E-176 T 14-10-2018 PhaeoP54_00658 af6b3d14f4b2bfd81dc1ac403cc22a3d 765 TIGRFAM TIGR02504 NrdJ_Z: ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent 11 554 3.6E-179 T 14-10-2018 IPR013344 Ribonucleotide reductase, adenosylcobalamin-dependent GO:0000166|GO:0004748|GO:0031419|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 PhaeoP54_00658 af6b3d14f4b2bfd81dc1ac403cc22a3d 765 Gene3D G3DSA:3.20.70.20 3 567 4.5E-200 T 14-10-2018 PhaeoP54_02399 75038692269c615b384ee6267ed8c1a9 257 SMART SM00849 15 173 4.9E-30 T 14-10-2018 IPR001279 Metallo-beta-lactamase PhaeoP54_02399 75038692269c615b384ee6267ed8c1a9 257 TIGRFAM TIGR03413 GSH_gloB: hydroxyacylglutathione hydrolase 7 257 1.6E-98 T 14-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 PhaeoP54_02399 75038692269c615b384ee6267ed8c1a9 257 Gene3D G3DSA:3.60.15.10 5 257 4.2E-80 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like PhaeoP54_02399 75038692269c615b384ee6267ed8c1a9 257 PIRSF PIRSF005457 1 257 1.0E-102 T 14-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 PhaeoP54_02399 75038692269c615b384ee6267ed8c1a9 257 SUPERFAMILY SSF56281 5 257 9.61E-64 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like PhaeoP54_02399 75038692269c615b384ee6267ed8c1a9 257 Pfam PF16123 Hydroxyacylglutathione hydrolase C-terminus 174 257 4.3E-27 T 14-10-2018 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 PhaeoP54_02399 75038692269c615b384ee6267ed8c1a9 257 Hamap MF_01374 Hydroxyacylglutathione hydrolase [gloB]. 5 257 41.96 T 14-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 PhaeoP54_02399 75038692269c615b384ee6267ed8c1a9 257 Pfam PF00753 Metallo-beta-lactamase superfamily 30 173 3.6E-12 T 14-10-2018 IPR001279 Metallo-beta-lactamase PhaeoP54_01176 17e19d893d225bd29e3a13798c14a613 406 Gene3D G3DSA:3.30.70.1250 119 240 9.3E-129 T 14-10-2018 IPR024052 Phosphopentomutase DeoB cap domain superfamily GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 PhaeoP54_01176 17e19d893d225bd29e3a13798c14a613 406 PIRSF PIRSF001491 1 405 1.4E-133 T 14-10-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 PhaeoP54_01176 17e19d893d225bd29e3a13798c14a613 406 Hamap MF_00740 Phosphopentomutase [deoB]. 1 404 42.909 T 14-10-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 PhaeoP54_01176 17e19d893d225bd29e3a13798c14a613 406 TIGRFAM TIGR01696 deoB: phosphopentomutase 3 394 8.4E-116 T 14-10-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 PhaeoP54_01176 17e19d893d225bd29e3a13798c14a613 406 SUPERFAMILY SSF53649 1 400 3.27E-67 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 PhaeoP54_01176 17e19d893d225bd29e3a13798c14a613 406 Gene3D G3DSA:3.40.720.10 3 401 9.3E-129 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 PhaeoP54_01176 17e19d893d225bd29e3a13798c14a613 406 Pfam PF01676 Metalloenzyme superfamily 3 394 4.4E-32 T 14-10-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 PhaeoP54_01176 17e19d893d225bd29e3a13798c14a613 406 SUPERFAMILY SSF143856 121 237 1.44E-44 T 14-10-2018 IPR024052 Phosphopentomutase DeoB cap domain superfamily GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 PhaeoP54_03770 6b8fc8c5218f7b7f00b3c56bf3498960 341 Gene3D G3DSA:1.10.10.60 240 341 1.1E-17 T 14-10-2018 PhaeoP54_03770 6b8fc8c5218f7b7f00b3c56bf3498960 341 SMART SM00342 259 341 3.7E-19 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PhaeoP54_03770 6b8fc8c5218f7b7f00b3c56bf3498960 341 Pfam PF12833 Helix-turn-helix domain 266 341 7.4E-14 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PhaeoP54_03770 6b8fc8c5218f7b7f00b3c56bf3498960 341 SUPERFAMILY SSF46689 294 341 4.93E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PhaeoP54_03770 6b8fc8c5218f7b7f00b3c56bf3498960 341 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 51 212 1.8E-27 T 14-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal PhaeoP54_01993 8482914cc21671251bf8293894c820e4 135 ProSitePatterns PS00938 Initiation factor 3 signature. 22 35 - T 14-10-2018 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 PhaeoP54_01993 8482914cc21671251bf8293894c820e4 135 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 47 131 7.0E-40 T 14-10-2018 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 PhaeoP54_01993 8482914cc21671251bf8293894c820e4 135 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 1 40 1.4E-19 T 14-10-2018 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 PhaeoP54_01993 8482914cc21671251bf8293894c820e4 135 Gene3D G3DSA:3.30.110.10 40 134 1.2E-40 T 14-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 PhaeoP54_01993 8482914cc21671251bf8293894c820e4 135 Gene3D G3DSA:3.10.20.80 1 39 1.7E-20 T 14-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 PhaeoP54_01993 8482914cc21671251bf8293894c820e4 135 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 1 132 1.0E-59 T 14-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 PhaeoP54_01993 8482914cc21671251bf8293894c820e4 135 SUPERFAMILY SSF55200 46 134 5.76E-36 T 14-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 PhaeoP54_01993 8482914cc21671251bf8293894c820e4 135 SUPERFAMILY SSF54364 1 42 4.45E-18 T 14-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 PhaeoP54_01116 b6e2f7735d4d8f920872e37478dae752 241 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 15 228 3.9E-13 T 14-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase PhaeoP54_01116 b6e2f7735d4d8f920872e37478dae752 241 SUPERFAMILY SSF56219 7 237 6.02E-37 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily PhaeoP54_01116 b6e2f7735d4d8f920872e37478dae752 241 Gene3D G3DSA:3.60.10.10 11 238 1.0E-33 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily PhaeoP54_00020 60ab54b0b7fba047529a6851712f1f6c 332 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 35 292 2.6E-28 T 14-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 PhaeoP54_00020 60ab54b0b7fba047529a6851712f1f6c 332 Gene3D G3DSA:3.40.190.170 26 327 3.2E-72 T 14-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily PhaeoP54_01403 7dfa7ec45095d93c2a639d14fd506e85 252 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 194 211 - T 14-10-2018 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 Reactome: R-HSA-446199|Reactome: R-HSA-4755609 PhaeoP54_01403 7dfa7ec45095d93c2a639d14fd506e85 252 SUPERFAMILY SSF64005 19 243 5.36E-85 T 14-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 PhaeoP54_01403 7dfa7ec45095d93c2a639d14fd506e85 252 Gene3D G3DSA:3.40.1180.10 2 243 1.8E-94 T 14-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 PhaeoP54_01403 7dfa7ec45095d93c2a639d14fd506e85 252 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 21 249 39.146 T 14-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 PhaeoP54_01403 7dfa7ec45095d93c2a639d14fd506e85 252 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 22 248 2.7E-85 T 14-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 PhaeoP54_01403 7dfa7ec45095d93c2a639d14fd506e85 252 Pfam PF01255 Putative undecaprenyl diphosphate synthase 28 248 1.9E-80 T 14-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 PhaeoP54_00719 2616d2c2858d342d5e5ae2c0720345d1 170 Pfam PF02559 CarD-like/TRCF domain 9 117 2.0E-18 T 14-10-2018 IPR003711 CarD-like/TRCF domain PhaeoP54_00719 2616d2c2858d342d5e5ae2c0720345d1 170 Gene3D G3DSA:2.30.30.840 3 69 3.6E-24 T 14-10-2018 PhaeoP54_00719 2616d2c2858d342d5e5ae2c0720345d1 170 SMART SM01058 8 118 5.2E-35 T 14-10-2018 IPR003711 CarD-like/TRCF domain PhaeoP54_00719 2616d2c2858d342d5e5ae2c0720345d1 170 Gene3D G3DSA:1.20.58.1290 70 165 8.7E-26 T 14-10-2018 PhaeoP54_00719 2616d2c2858d342d5e5ae2c0720345d1 170 SUPERFAMILY SSF141259 7 72 9.15E-17 T 14-10-2018 IPR036101 CarD-like/TRCF domain superfamily PhaeoP54_01251 de9f23863ebb7fb4b31429910fb36ee1 892 SMART SM00387 779 888 7.6E-27 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PhaeoP54_01251 de9f23863ebb7fb4b31429910fb36ee1 892 Gene3D G3DSA:1.10.287.130 658 739 1.7E-23 T 14-10-2018 PhaeoP54_01251 de9f23863ebb7fb4b31429910fb36ee1 892 PRINTS PR00344 Bacterial sensor protein C-terminal signature 835 845 1.3E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PhaeoP54_01251 de9f23863ebb7fb4b31429910fb36ee1 892 PRINTS PR00344 Bacterial sensor protein C-terminal signature 872 885 1.3E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PhaeoP54_01251 de9f23863ebb7fb4b31429910fb36ee1 892 PRINTS PR00344 Bacterial sensor protein C-terminal signature 817 831 1.3E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PhaeoP54_01251 de9f23863ebb7fb4b31429910fb36ee1 892 PRINTS PR00344 Bacterial sensor protein C-terminal signature 849 867 1.3E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PhaeoP54_01251 de9f23863ebb7fb4b31429910fb36ee1 892 SUPERFAMILY SSF47384 651 735 6.08E-20 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 PhaeoP54_01251 de9f23863ebb7fb4b31429910fb36ee1 892 Gene3D G3DSA:1.20.1730.10 38 474 5.7E-13 T 14-10-2018 IPR038377 Sodium/glucose symporter superfamily PhaeoP54_01251 de9f23863ebb7fb4b31429910fb36ee1 892 SMART SM00388 667 734 2.4E-20 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PhaeoP54_01251 de9f23863ebb7fb4b31429910fb36ee1 892 Pfam PF00512 His Kinase A (phospho-acceptor) domain 668 734 5.9E-18 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PhaeoP54_01251 de9f23863ebb7fb4b31429910fb36ee1 892 SUPERFAMILY SSF55874 723 888 1.96E-32 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PhaeoP54_01251 de9f23863ebb7fb4b31429910fb36ee1 892 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 780 887 3.0E-17 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PhaeoP54_01251 de9f23863ebb7fb4b31429910fb36ee1 892 Gene3D G3DSA:3.30.565.10 741 891 1.7E-28 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PhaeoP54_01925 5b00768ee0d3e05e00e07daf2d126992 273 Pfam PF04377 Arginine-tRNA-protein transferase, C terminus 108 229 1.5E-34 T 14-10-2018 IPR007472 N-end rule aminoacyl transferase, C-terminal GO:0004057|GO:0016598 MetaCyc: PWY-7802 PhaeoP54_01925 5b00768ee0d3e05e00e07daf2d126992 273 Hamap MF_00689 Aspartate/glutamate leucyltransferase [bpt]. 7 236 38.979 T 14-10-2018 IPR017138 Aspartate/glutamate leucyltransferase GO:0008914|GO:0071596 MetaCyc: PWY-7802 PhaeoP54_01925 5b00768ee0d3e05e00e07daf2d126992 273 PIRSF PIRSF037208 1 249 1.2E-89 T 14-10-2018 IPR017138 Aspartate/glutamate leucyltransferase GO:0008914|GO:0071596 MetaCyc: PWY-7802 PhaeoP54_01925 5b00768ee0d3e05e00e07daf2d126992 273 Pfam PF04376 Arginine-tRNA-protein transferase, N terminus 18 87 7.9E-16 T 14-10-2018 IPR007471 N-end aminoacyl transferase, N-terminal GO:0004057|GO:0016598 MetaCyc: PWY-7802 PhaeoP54_01925 5b00768ee0d3e05e00e07daf2d126992 273 SUPERFAMILY SSF55729 82 242 2.69E-29 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase PhaeoP54_00362 e85dbb8c5b3fab2ca59c522acfdb1c35 252 Gene3D G3DSA:3.40.50.720 10 252 1.9E-63 T 14-10-2018 PhaeoP54_00362 e85dbb8c5b3fab2ca59c522acfdb1c35 252 SUPERFAMILY SSF51735 6 231 1.83E-61 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PhaeoP54_00362 e85dbb8c5b3fab2ca59c522acfdb1c35 252 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 144 172 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 PhaeoP54_00362 e85dbb8c5b3fab2ca59c522acfdb1c35 252 Pfam PF00106 short chain dehydrogenase 11 200 8.1E-49 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_00362 e85dbb8c5b3fab2ca59c522acfdb1c35 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 3.9E-23 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_00362 e85dbb8c5b3fab2ca59c522acfdb1c35 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 3.9E-23 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_00362 e85dbb8c5b3fab2ca59c522acfdb1c35 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 131 147 3.9E-23 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_00362 e85dbb8c5b3fab2ca59c522acfdb1c35 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 3.9E-23 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_00362 e85dbb8c5b3fab2ca59c522acfdb1c35 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 137 145 8.1E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_00362 e85dbb8c5b3fab2ca59c522acfdb1c35 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 8.1E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_00362 e85dbb8c5b3fab2ca59c522acfdb1c35 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 8.1E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_01903 1fb03ada46f7dff8d2b453f9472eebd9 292 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 6 163 1.7E-48 T 14-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain PhaeoP54_01903 1fb03ada46f7dff8d2b453f9472eebd9 292 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 216 289 2.0E-13 T 14-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal PhaeoP54_01903 1fb03ada46f7dff8d2b453f9472eebd9 292 SUPERFAMILY SSF52540 4 171 6.29E-32 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_01903 1fb03ada46f7dff8d2b453f9472eebd9 292 Gene3D G3DSA:3.30.1220.10 199 291 7.8E-8 T 14-10-2018 IPR036627 CobW-like, C-terminal domain superfamily PhaeoP54_01903 1fb03ada46f7dff8d2b453f9472eebd9 292 Gene3D G3DSA:3.40.50.300 3 198 1.5E-57 T 14-10-2018 PhaeoP54_01903 1fb03ada46f7dff8d2b453f9472eebd9 292 SMART SM00833 214 292 0.0034 T 14-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal PhaeoP54_01903 1fb03ada46f7dff8d2b453f9472eebd9 292 SUPERFAMILY SSF90002 215 289 1.57E-11 T 14-10-2018 PhaeoP54_03956 72a66ac1ce386aa827c6163f22119b9a 185 Pfam PF08281 Sigma-70, region 4 121 173 2.5E-12 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PhaeoP54_03956 72a66ac1ce386aa827c6163f22119b9a 185 SUPERFAMILY SSF88659 114 177 5.01E-13 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like PhaeoP54_03956 72a66ac1ce386aa827c6163f22119b9a 185 Gene3D G3DSA:1.10.10.10 118 184 1.1E-15 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_03956 72a66ac1ce386aa827c6163f22119b9a 185 Pfam PF04542 Sigma-70 region 2 26 87 2.8E-15 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 PhaeoP54_03956 72a66ac1ce386aa827c6163f22119b9a 185 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 26 174 5.2E-20 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 PhaeoP54_03956 72a66ac1ce386aa827c6163f22119b9a 185 Gene3D G3DSA:1.10.1740.10 3 80 3.9E-19 T 14-10-2018 PhaeoP54_03956 72a66ac1ce386aa827c6163f22119b9a 185 SUPERFAMILY SSF88946 18 101 6.02E-18 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 PhaeoP54_01458 56cf757f2e0566618527b4cc4ca7935d 148 SUPERFAMILY SSF55961 1 148 7.7E-36 T 14-10-2018 PhaeoP54_01458 56cf757f2e0566618527b4cc4ca7935d 148 Gene3D G3DSA:3.30.530.20 2 148 1.8E-44 T 14-10-2018 IPR023393 START-like domain superfamily PhaeoP54_01458 56cf757f2e0566618527b4cc4ca7935d 148 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 10 140 3.6E-27 T 14-10-2018 IPR005031 Coenzyme Q-binding protein COQ10, START domain Reactome: R-HSA-611105 PhaeoP54_02458 90afb8f347d0dbacd7c146f4dfb4c084 203 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 34 57 3.1E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PhaeoP54_02458 90afb8f347d0dbacd7c146f4dfb4c084 203 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 13 26 3.1E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PhaeoP54_02458 90afb8f347d0dbacd7c146f4dfb4c084 203 SUPERFAMILY SSF46689 7 74 2.84E-15 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PhaeoP54_02458 90afb8f347d0dbacd7c146f4dfb4c084 203 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 58 3.6E-11 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PhaeoP54_02458 90afb8f347d0dbacd7c146f4dfb4c084 203 Pfam PF13305 WHG domain 87 176 2.3E-10 T 14-10-2018 IPR025996 WHG domain PhaeoP54_02458 90afb8f347d0dbacd7c146f4dfb4c084 203 SUPERFAMILY SSF48498 84 179 4.0E-13 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily PhaeoP54_02458 90afb8f347d0dbacd7c146f4dfb4c084 203 Gene3D G3DSA:1.10.357.10 2 192 4.8E-41 T 14-10-2018 PhaeoP54_01940 e97cf65499fc094153cee64ceb3ae83a 425 Pfam PF11741 AMIN domain 54 130 5.1E-8 T 14-10-2018 IPR021731 AMIN domain PhaeoP54_01940 e97cf65499fc094153cee64ceb3ae83a 425 Gene3D G3DSA:3.40.630.40 188 420 6.4E-61 T 14-10-2018 PhaeoP54_01940 e97cf65499fc094153cee64ceb3ae83a 425 Gene3D G3DSA:2.60.40.3500 38 150 5.4E-14 T 14-10-2018 PhaeoP54_01940 e97cf65499fc094153cee64ceb3ae83a 425 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 192 409 2.9E-45 T 14-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 PhaeoP54_01940 e97cf65499fc094153cee64ceb3ae83a 425 SMART SM00646 255 410 1.6E-40 T 14-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 PhaeoP54_01940 e97cf65499fc094153cee64ceb3ae83a 425 SUPERFAMILY SSF53187 190 412 9.42E-47 T 14-10-2018 PhaeoP54_01899 55163ba556f8dc12b56a288d5b254ad0 180 SUPERFAMILY SSF88723 1 113 2.35E-6 T 14-10-2018 IPR029060 PIN-like domain superfamily PhaeoP54_01899 55163ba556f8dc12b56a288d5b254ad0 180 Pfam PF13470 PIN domain 3 109 2.1E-12 T 14-10-2018 IPR002716 PIN domain PhaeoP54_00775 aa295f72fc14464b839e8917d65d93cb 449 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 258 447 5.3E-32 T 14-10-2018 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 PhaeoP54_00775 aa295f72fc14464b839e8917d65d93cb 449 SUPERFAMILY SSF52317 258 444 1.56E-26 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like PhaeoP54_00775 aa295f72fc14464b839e8917d65d93cb 449 Gene3D G3DSA:3.40.50.880 266 444 5.1E-7 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like PhaeoP54_00775 aa295f72fc14464b839e8917d65d93cb 449 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 19 205 2.0E-15 T 14-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain PhaeoP54_00775 aa295f72fc14464b839e8917d65d93cb 449 Gene3D G3DSA:3.40.50.300 18 201 2.7E-22 T 14-10-2018 PhaeoP54_00775 aa295f72fc14464b839e8917d65d93cb 449 Hamap MF_00027 Hydrogenobyrinate a,c-diamide synthase [cobB]. 16 449 40.172 T 14-10-2018 IPR004484 Cobyrinic acid a,c-diamide synthase CbiA GO:0009236|GO:0042242 PhaeoP54_00775 aa295f72fc14464b839e8917d65d93cb 449 TIGRFAM TIGR00379 cobB: cobyrinic acid a,c-diamide synthase 20 443 7.2E-90 T 14-10-2018 IPR004484 Cobyrinic acid a,c-diamide synthase CbiA GO:0009236|GO:0042242 PhaeoP54_00775 aa295f72fc14464b839e8917d65d93cb 449 SUPERFAMILY SSF52540 14 210 4.3E-36 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_03581 85f97a2d38c2cb6a88ff348b2d038634 756 ProSitePatterns PS01175 Ribonuclease II family signature. 547 571 - T 14-10-2018 IPR022966 Ribonuclease II/R, conserved site PhaeoP54_03581 85f97a2d38c2cb6a88ff348b2d038634 756 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 112 696 8.8E-147 T 14-10-2018 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 PhaeoP54_03581 85f97a2d38c2cb6a88ff348b2d038634 756 Pfam PF00575 S1 RNA binding domain 627 694 1.9E-8 T 14-10-2018 IPR003029 S1 domain GO:0003676 PhaeoP54_03581 85f97a2d38c2cb6a88ff348b2d038634 756 SUPERFAMILY SSF50249 219 625 2.28E-132 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold PhaeoP54_03581 85f97a2d38c2cb6a88ff348b2d038634 756 Hamap MF_01895 Ribonuclease R [rnr]. 24 709 53.612 T 14-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 PhaeoP54_03581 85f97a2d38c2cb6a88ff348b2d038634 756 SMART SM00955 249 580 2.9E-155 T 14-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 PhaeoP54_03581 85f97a2d38c2cb6a88ff348b2d038634 756 SMART SM00316 626 709 2.7E-9 T 14-10-2018 IPR022967 RNA-binding domain, S1 PhaeoP54_03581 85f97a2d38c2cb6a88ff348b2d038634 756 Gene3D G3DSA:2.40.50.140 630 755 2.3E-14 T 14-10-2018 PhaeoP54_03581 85f97a2d38c2cb6a88ff348b2d038634 756 SUPERFAMILY SSF50249 626 704 7.49E-15 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold PhaeoP54_03581 85f97a2d38c2cb6a88ff348b2d038634 756 TIGRFAM TIGR02063 RNase_R: ribonuclease R 5 709 1.0E-202 T 14-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 PhaeoP54_03581 85f97a2d38c2cb6a88ff348b2d038634 756 Pfam PF00773 RNB domain 249 575 1.7E-91 T 14-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 PhaeoP54_01037 bb2f4eb490285febedb982a8c2f8f6de 376 SUPERFAMILY SSF48371 43 249 8.44E-39 T 14-10-2018 IPR016024 Armadillo-type fold PhaeoP54_01037 bb2f4eb490285febedb982a8c2f8f6de 376 Gene3D G3DSA:1.25.40.290 131 246 2.4E-29 T 14-10-2018 PhaeoP54_00780 cd5c857024ee8e9e2000bd953f89d81a 254 Gene3D G3DSA:3.30.950.10 123 252 2.4E-47 T 14-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 PhaeoP54_00780 cd5c857024ee8e9e2000bd953f89d81a 254 Gene3D G3DSA:3.40.1010.10 1 122 7.6E-28 T 14-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 PhaeoP54_00780 cd5c857024ee8e9e2000bd953f89d81a 254 SUPERFAMILY SSF53790 6 251 3.93E-49 T 14-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 PhaeoP54_00780 cd5c857024ee8e9e2000bd953f89d81a 254 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 9 220 4.9E-31 T 14-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 PhaeoP54_00780 cd5c857024ee8e9e2000bd953f89d81a 254 TIGRFAM TIGR01466 cobJ_cbiH: precorrin-3B C17-methyltransferase 9 250 4.2E-87 T 14-10-2018 IPR006363 Precorrin-3B C17-methyltransferase domain GO:0008168|GO:0009236 PhaeoP54_03784 ce4f626a9994a153ad133a8751fcbd84 95 SUPERFAMILY SSF52091 10 85 6.28E-7 T 14-10-2018 IPR036513 STAS domain superfamily PhaeoP54_03784 ce4f626a9994a153ad133a8751fcbd84 95 Gene3D G3DSA:3.30.750.24 7 95 5.9E-7 T 14-10-2018 IPR036513 STAS domain superfamily PhaeoP54_03784 ce4f626a9994a153ad133a8751fcbd84 95 Pfam PF13466 STAS domain 21 85 1.7E-9 T 14-10-2018 IPR002645 STAS domain PhaeoP54_00078 01e36913930fe3084660e84de21ed3a1 699 Pfam PF00271 Helicase conserved C-terminal domain 239 341 8.4E-16 T 14-10-2018 IPR001650 Helicase, C-terminal PhaeoP54_00078 01e36913930fe3084660e84de21ed3a1 699 SUPERFAMILY SSF47819 537 612 1.4E-21 T 14-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 PhaeoP54_00078 01e36913930fe3084660e84de21ed3a1 699 Gene3D G3DSA:3.40.50.300 220 351 2.5E-36 T 14-10-2018 PhaeoP54_00078 01e36913930fe3084660e84de21ed3a1 699 SMART SM00956 422 525 2.9E-43 T 14-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 PhaeoP54_00078 01e36913930fe3084660e84de21ed3a1 699 SUPERFAMILY SSF46785 414 530 9.52E-36 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_00078 01e36913930fe3084660e84de21ed3a1 699 Gene3D G3DSA:1.10.150.80 542 613 3.8E-22 T 14-10-2018 PhaeoP54_00078 01e36913930fe3084660e84de21ed3a1 699 SMART SM00487 33 227 1.4E-29 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain PhaeoP54_00078 01e36913930fe3084660e84de21ed3a1 699 Pfam PF16124 RecQ zinc-binding 354 414 1.7E-12 T 14-10-2018 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain PhaeoP54_00078 01e36913930fe3084660e84de21ed3a1 699 SMART SM00490 261 342 1.4E-26 T 14-10-2018 IPR001650 Helicase, C-terminal PhaeoP54_00078 01e36913930fe3084660e84de21ed3a1 699 SUPERFAMILY SSF52540 76 362 6.27E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_00078 01e36913930fe3084660e84de21ed3a1 699 Pfam PF09382 RQC domain 418 528 5.0E-30 T 14-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 PhaeoP54_00078 01e36913930fe3084660e84de21ed3a1 699 SMART SM00341 540 620 2.2E-15 T 14-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 PhaeoP54_00078 01e36913930fe3084660e84de21ed3a1 699 Gene3D G3DSA:1.10.10.10 352 535 1.0E-37 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_00078 01e36913930fe3084660e84de21ed3a1 699 Pfam PF00270 DEAD/DEAH box helicase 39 197 8.7E-19 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 PhaeoP54_00078 01e36913930fe3084660e84de21ed3a1 699 Gene3D G3DSA:3.40.50.300 14 212 1.0E-73 T 14-10-2018 PhaeoP54_00078 01e36913930fe3084660e84de21ed3a1 699 Pfam PF00570 HRDC domain 545 610 9.9E-21 T 14-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 PhaeoP54_00078 01e36913930fe3084660e84de21ed3a1 699 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 27 474 2.9E-140 T 14-10-2018 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 PhaeoP54_00078 01e36913930fe3084660e84de21ed3a1 699 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 27 611 1.1E-211 T 14-10-2018 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 PhaeoP54_03389 04637dd0fb606ce3528cdb5c5cec8dfa 639 SUPERFAMILY SSF100920 380 536 4.45E-63 T 14-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 PhaeoP54_03389 04637dd0fb606ce3528cdb5c5cec8dfa 639 SUPERFAMILY SSF53067 1 182 4.26E-68 T 14-10-2018 PhaeoP54_03389 04637dd0fb606ce3528cdb5c5cec8dfa 639 SUPERFAMILY SSF53067 185 378 8.03E-65 T 14-10-2018 PhaeoP54_03389 04637dd0fb606ce3528cdb5c5cec8dfa 639 SUPERFAMILY SSF100934 503 608 1.7E-19 T 14-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 PhaeoP54_03389 04637dd0fb606ce3528cdb5c5cec8dfa 639 Gene3D G3DSA:1.20.1270.10 520 605 5.1E-22 T 14-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 PhaeoP54_03389 04637dd0fb606ce3528cdb5c5cec8dfa 639 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 PhaeoP54_03389 04637dd0fb606ce3528cdb5c5cec8dfa 639 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 634 37.205 T 14-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 PhaeoP54_03389 04637dd0fb606ce3528cdb5c5cec8dfa 639 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 601 6.2E-291 T 14-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 PhaeoP54_03389 04637dd0fb606ce3528cdb5c5cec8dfa 639 PRINTS PR00301 70kDa heat shock protein signature 53 61 3.0E-80 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 PhaeoP54_03389 04637dd0fb606ce3528cdb5c5cec8dfa 639 PRINTS PR00301 70kDa heat shock protein signature 384 403 3.0E-80 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 PhaeoP54_03389 04637dd0fb606ce3528cdb5c5cec8dfa 639 PRINTS PR00301 70kDa heat shock protein signature 465 481 3.0E-80 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 PhaeoP54_03389 04637dd0fb606ce3528cdb5c5cec8dfa 639 PRINTS PR00301 70kDa heat shock protein signature 137 157 3.0E-80 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 PhaeoP54_03389 04637dd0fb606ce3528cdb5c5cec8dfa 639 PRINTS PR00301 70kDa heat shock protein signature 196 206 3.0E-80 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 PhaeoP54_03389 04637dd0fb606ce3528cdb5c5cec8dfa 639 PRINTS PR00301 70kDa heat shock protein signature 31 43 3.0E-80 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 PhaeoP54_03389 04637dd0fb606ce3528cdb5c5cec8dfa 639 PRINTS PR00301 70kDa heat shock protein signature 361 381 3.0E-80 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 PhaeoP54_03389 04637dd0fb606ce3528cdb5c5cec8dfa 639 PRINTS PR00301 70kDa heat shock protein signature 330 346 3.0E-80 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 PhaeoP54_03389 04637dd0fb606ce3528cdb5c5cec8dfa 639 PRINTS PR00301 70kDa heat shock protein signature 3 16 3.0E-80 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 PhaeoP54_03389 04637dd0fb606ce3528cdb5c5cec8dfa 639 Gene3D G3DSA:3.30.420.40 183 358 2.0E-160 T 14-10-2018 PhaeoP54_03389 04637dd0fb606ce3528cdb5c5cec8dfa 639 Gene3D G3DSA:3.30.30.30 66 117 2.0E-160 T 14-10-2018 PhaeoP54_03389 04637dd0fb606ce3528cdb5c5cec8dfa 639 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 333 347 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 PhaeoP54_03389 04637dd0fb606ce3528cdb5c5cec8dfa 639 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 190 203 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 PhaeoP54_03389 04637dd0fb606ce3528cdb5c5cec8dfa 639 Gene3D G3DSA:3.90.640.10 222 311 2.0E-160 T 14-10-2018 PhaeoP54_03389 04637dd0fb606ce3528cdb5c5cec8dfa 639 Pfam PF00012 Hsp70 protein 4 601 2.5E-271 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 PhaeoP54_03389 04637dd0fb606ce3528cdb5c5cec8dfa 639 Gene3D G3DSA:2.60.34.10 379 519 1.6E-66 T 14-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 PhaeoP54_03389 04637dd0fb606ce3528cdb5c5cec8dfa 639 Gene3D G3DSA:3.30.420.40 5 373 2.0E-160 T 14-10-2018 PhaeoP54_00483 c94713e23f559dad8622b58cf0d0a920 476 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 273 284 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 PhaeoP54_00483 c94713e23f559dad8622b58cf0d0a920 476 SUPERFAMILY SSF53720 2 472 4.06E-149 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 PhaeoP54_00483 c94713e23f559dad8622b58cf0d0a920 476 Pfam PF00171 Aldehyde dehydrogenase family 17 471 3.9E-153 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 PhaeoP54_00483 c94713e23f559dad8622b58cf0d0a920 476 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 245 252 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 PhaeoP54_00483 c94713e23f559dad8622b58cf0d0a920 476 Gene3D G3DSA:3.40.605.10 20 470 4.8E-152 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 PhaeoP54_00483 c94713e23f559dad8622b58cf0d0a920 476 Gene3D G3DSA:3.40.309.10 249 440 4.8E-152 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 PhaeoP54_03102 a0e14d595a15ae04695c49f08e0b9e8e 199 Gene3D G3DSA:3.40.50.150 2 199 6.3E-51 T 14-10-2018 PhaeoP54_03102 a0e14d595a15ae04695c49f08e0b9e8e 199 Pfam PF13649 Methyltransferase domain 46 134 3.6E-8 T 14-10-2018 PhaeoP54_03102 a0e14d595a15ae04695c49f08e0b9e8e 199 SUPERFAMILY SSF53335 10 176 8.74E-27 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PhaeoP54_03917 3a63bfaefcd1bfb35301018a774919d0 631 SUPERFAMILY SSF90123 28 334 6.67E-49 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 PhaeoP54_03917 3a63bfaefcd1bfb35301018a774919d0 631 SUPERFAMILY SSF52540 351 605 1.87E-79 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_03917 3a63bfaefcd1bfb35301018a774919d0 631 SMART SM00382 390 581 2.1E-18 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_03917 3a63bfaefcd1bfb35301018a774919d0 631 ProSitePatterns PS00211 ABC transporters family signature. 507 521 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PhaeoP54_03917 3a63bfaefcd1bfb35301018a774919d0 631 Pfam PF00664 ABC transporter transmembrane region 41 307 1.1E-20 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 PhaeoP54_03917 3a63bfaefcd1bfb35301018a774919d0 631 Gene3D G3DSA:3.40.50.300 359 608 4.3E-87 T 14-10-2018 PhaeoP54_03917 3a63bfaefcd1bfb35301018a774919d0 631 Gene3D G3DSA:1.20.1560.10 9 332 4.3E-31 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 PhaeoP54_03917 3a63bfaefcd1bfb35301018a774919d0 631 Pfam PF00005 ABC transporter 383 535 2.4E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PhaeoP54_03996 8e18c18f38325a3b4c0a818f3755dbc3 329 Gene3D G3DSA:3.40.50.300 119 324 4.0E-48 T 14-10-2018 PhaeoP54_03996 8e18c18f38325a3b4c0a818f3755dbc3 329 SUPERFAMILY SSF52540 17 304 1.91E-29 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_03996 8e18c18f38325a3b4c0a818f3755dbc3 329 Gene3D G3DSA:3.30.450.90 15 112 6.1E-9 T 14-10-2018 PhaeoP54_03996 8e18c18f38325a3b4c0a818f3755dbc3 329 Pfam PF00437 Type II/IV secretion system protein 18 306 1.9E-54 T 14-10-2018 IPR001482 Type II/IV secretion system protein PhaeoP54_03302 10ef5d788fe407d27143ef4283f0b6f1 604 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 27 597 4.6E-172 T 14-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 PhaeoP54_00468 cc0dbd1611a476fb67d2039e0e76856b 365 SUPERFAMILY SSF81271 281 361 5.67E-35 T 14-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 PhaeoP54_00468 cc0dbd1611a476fb67d2039e0e76856b 365 PIRSF PIRSF006641 1 365 1.0E-152 T 14-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 PhaeoP54_00468 cc0dbd1611a476fb67d2039e0e76856b 365 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 364 1.4E-147 T 14-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 PhaeoP54_00468 cc0dbd1611a476fb67d2039e0e76856b 365 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 365 42.734 T 14-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 PhaeoP54_00468 cc0dbd1611a476fb67d2039e0e76856b 365 Gene3D G3DSA:1.10.150.300 114 201 1.5E-149 T 14-10-2018 IPR023192 TGS-like domain superfamily Reactome: R-HSA-114608 PhaeoP54_00468 cc0dbd1611a476fb67d2039e0e76856b 365 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 71 86 5.6E-35 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 PhaeoP54_00468 cc0dbd1611a476fb67d2039e0e76856b 365 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 27 45 5.6E-35 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 PhaeoP54_00468 cc0dbd1611a476fb67d2039e0e76856b 365 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 88 106 5.6E-35 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 PhaeoP54_00468 cc0dbd1611a476fb67d2039e0e76856b 365 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 5.6E-35 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 PhaeoP54_00468 cc0dbd1611a476fb67d2039e0e76856b 365 SUPERFAMILY SSF52540 3 302 3.36E-79 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_00468 cc0dbd1611a476fb67d2039e0e76856b 365 Gene3D G3DSA:3.10.20.30 49 363 1.5E-149 T 14-10-2018 IPR012675 Beta-grasp domain superfamily PhaeoP54_00468 cc0dbd1611a476fb67d2039e0e76856b 365 Gene3D G3DSA:3.40.50.300 4 280 1.5E-149 T 14-10-2018 PhaeoP54_00468 cc0dbd1611a476fb67d2039e0e76856b 365 Pfam PF06071 Protein of unknown function (DUF933) 281 364 1.4E-38 T 14-10-2018 IPR013029 YchF, C-terminal domain Reactome: R-HSA-114608 PhaeoP54_00468 cc0dbd1611a476fb67d2039e0e76856b 365 Pfam PF01926 50S ribosome-binding GTPase 5 118 4.4E-23 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 PhaeoP54_01068 bcff9c67a2fdad781677046410abf8d8 328 Pfam PF07728 AAA domain (dynein-related subfamily) 64 219 6.3E-11 T 14-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 PhaeoP54_01068 bcff9c67a2fdad781677046410abf8d8 328 SUPERFAMILY SSF52540 61 309 1.31E-38 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_01068 bcff9c67a2fdad781677046410abf8d8 328 SMART SM00382 60 239 9.2E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_01488 4c82f69838e313eae302b1bf4abae72a 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 189 206 3.1E-37 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_01488 4c82f69838e313eae302b1bf4abae72a 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 168 187 3.1E-37 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_01488 4c82f69838e313eae302b1bf4abae72a 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 142 158 3.1E-37 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_01488 4c82f69838e313eae302b1bf4abae72a 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 95 106 3.1E-37 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_01488 4c82f69838e313eae302b1bf4abae72a 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 23 40 3.1E-37 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_01488 4c82f69838e313eae302b1bf4abae72a 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 234 254 3.1E-37 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_01488 4c82f69838e313eae302b1bf4abae72a 273 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 168 187 4.9E-13 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_01488 4c82f69838e313eae302b1bf4abae72a 273 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 95 106 4.9E-13 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_01488 4c82f69838e313eae302b1bf4abae72a 273 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 148 156 4.9E-13 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_01488 4c82f69838e313eae302b1bf4abae72a 273 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 155 183 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 PhaeoP54_01488 4c82f69838e313eae302b1bf4abae72a 273 TIGRFAM TIGR01963 PHB_DH: 3-hydroxybutyrate dehydrogenase 22 272 1.3E-107 T 14-10-2018 IPR011294 3-hydroxybutyrate dehydrogenase GO:0003858|GO:0055114 PhaeoP54_01488 4c82f69838e313eae302b1bf4abae72a 273 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 29 271 4.2E-55 T 14-10-2018 PhaeoP54_01488 4c82f69838e313eae302b1bf4abae72a 273 SUPERFAMILY SSF51735 21 272 3.82E-76 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PhaeoP54_01488 4c82f69838e313eae302b1bf4abae72a 273 Gene3D G3DSA:3.40.50.720 4 273 1.6E-81 T 14-10-2018 PhaeoP54_02607 d205ee48d54b52c0a74edf8e61d7531b 507 SUPERFAMILY SSF56024 279 449 5.14E-26 T 14-10-2018 PhaeoP54_02607 d205ee48d54b52c0a74edf8e61d7531b 507 Gene3D G3DSA:3.30.870.10 12 250 1.9E-14 T 14-10-2018 PhaeoP54_02607 d205ee48d54b52c0a74edf8e61d7531b 507 Pfam PF00614 Phospholipase D Active site motif 181 205 1.4E-7 T 14-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 PhaeoP54_02607 d205ee48d54b52c0a74edf8e61d7531b 507 Pfam PF13091 PLD-like domain 287 441 1.7E-10 T 14-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 PhaeoP54_02607 d205ee48d54b52c0a74edf8e61d7531b 507 SUPERFAMILY SSF56024 16 245 4.51E-16 T 14-10-2018 PhaeoP54_02607 d205ee48d54b52c0a74edf8e61d7531b 507 SMART SM00155 390 417 4.7E-4 T 14-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 PhaeoP54_02607 d205ee48d54b52c0a74edf8e61d7531b 507 SMART SM00155 178 205 5.0E-4 T 14-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 PhaeoP54_02607 d205ee48d54b52c0a74edf8e61d7531b 507 Gene3D G3DSA:3.30.870.10 273 451 5.1E-22 T 14-10-2018 PhaeoP54_02184 7bd5b840879389510141530bc2de5a6f 182 Pfam PF06240 Carbon monoxide dehydrogenase subunit G (CoxG) 8 145 8.3E-38 T 14-10-2018 IPR010419 Carbon monoxide dehydrogenase subunit G PhaeoP54_02184 7bd5b840879389510141530bc2de5a6f 182 Gene3D G3DSA:3.30.530.20 1 158 3.6E-46 T 14-10-2018 IPR023393 START-like domain superfamily PhaeoP54_02184 7bd5b840879389510141530bc2de5a6f 182 SUPERFAMILY SSF55961 1 147 6.97E-47 T 14-10-2018 PhaeoP54_01389 36d5e6dece58b5043b4db92672c6607c 196 PRINTS PR01100 Shikimate kinase family signature 24 39 5.5E-22 T 14-10-2018 PhaeoP54_01389 36d5e6dece58b5043b4db92672c6607c 196 PRINTS PR01100 Shikimate kinase family signature 48 61 5.5E-22 T 14-10-2018 PhaeoP54_01389 36d5e6dece58b5043b4db92672c6607c 196 PRINTS PR01100 Shikimate kinase family signature 76 84 5.5E-22 T 14-10-2018 PhaeoP54_01389 36d5e6dece58b5043b4db92672c6607c 196 PRINTS PR01100 Shikimate kinase family signature 94 103 5.5E-22 T 14-10-2018 PhaeoP54_01389 36d5e6dece58b5043b4db92672c6607c 196 PRINTS PR01100 Shikimate kinase family signature 115 132 5.5E-22 T 14-10-2018 PhaeoP54_01389 36d5e6dece58b5043b4db92672c6607c 196 Hamap MF_00109 Shikimate kinase [aroK]. 21 187 28.79 T 14-10-2018 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 PhaeoP54_01389 36d5e6dece58b5043b4db92672c6607c 196 Gene3D G3DSA:3.40.50.300 14 193 6.8E-55 T 14-10-2018 PhaeoP54_01389 36d5e6dece58b5043b4db92672c6607c 196 Pfam PF01202 Shikimate kinase 30 186 8.6E-50 T 14-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 PhaeoP54_01389 36d5e6dece58b5043b4db92672c6607c 196 ProSitePatterns PS01128 Shikimate kinase signature. 77 102 - T 14-10-2018 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 PhaeoP54_01389 36d5e6dece58b5043b4db92672c6607c 196 SUPERFAMILY SSF52540 23 187 1.83E-31 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_00385 bbc4b676704610319969669bdeb4c75a 381 SUPERFAMILY SSF47203 238 375 7.18E-30 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 PhaeoP54_00385 bbc4b676704610319969669bdeb4c75a 381 SUPERFAMILY SSF56645 1 227 3.53E-38 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 PhaeoP54_00385 bbc4b676704610319969669bdeb4c75a 381 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 237 370 6.6E-21 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PhaeoP54_00385 bbc4b676704610319969669bdeb4c75a 381 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 125 201 4.1E-10 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 PhaeoP54_00385 bbc4b676704610319969669bdeb4c75a 381 Gene3D G3DSA:2.40.110.10 124 236 2.2E-14 T 14-10-2018 PhaeoP54_00385 bbc4b676704610319969669bdeb4c75a 381 Gene3D G3DSA:1.20.140.10 237 377 1.3E-28 T 14-10-2018 PhaeoP54_00385 bbc4b676704610319969669bdeb4c75a 381 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 94 6.1E-11 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 PhaeoP54_00385 bbc4b676704610319969669bdeb4c75a 381 Gene3D G3DSA:1.10.540.10 1 121 8.9E-22 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 PhaeoP54_03635 182ba45fca416343ba1adfb6fd09b7ef 260 Gene3D G3DSA:3.40.50.300 5 249 1.4E-58 T 14-10-2018 PhaeoP54_03635 182ba45fca416343ba1adfb6fd09b7ef 260 Pfam PF00005 ABC transporter 32 182 5.4E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PhaeoP54_03635 182ba45fca416343ba1adfb6fd09b7ef 260 SMART SM00382 40 256 1.2E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_03635 182ba45fca416343ba1adfb6fd09b7ef 260 SUPERFAMILY SSF52540 14 243 4.71E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_03082 30fbccfcc1a10ba5b4e88bbba981f049 532 TIGRFAM TIGR00224 pckA: phosphoenolpyruvate carboxykinase (ATP) 9 529 1.6E-199 T 14-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 PhaeoP54_03082 30fbccfcc1a10ba5b4e88bbba981f049 532 SUPERFAMILY SSF53795 215 529 8.42E-128 T 14-10-2018 PhaeoP54_03082 30fbccfcc1a10ba5b4e88bbba981f049 532 Pfam PF01293 Phosphoenolpyruvate carboxykinase 22 484 4.5E-212 T 14-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 PhaeoP54_03082 30fbccfcc1a10ba5b4e88bbba981f049 532 Hamap MF_00453 Phosphoenolpyruvate carboxykinase (ATP) [pckA]. 16 530 52.274 T 14-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 PhaeoP54_03082 30fbccfcc1a10ba5b4e88bbba981f049 532 PIRSF PIRSF006294 5 531 5.8E-223 T 14-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 PhaeoP54_03082 30fbccfcc1a10ba5b4e88bbba981f049 532 SUPERFAMILY SSF68923 7 214 1.19E-82 T 14-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 PhaeoP54_03082 30fbccfcc1a10ba5b4e88bbba981f049 532 Gene3D G3DSA:3.40.449.10 32 215 3.1E-215 T 14-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 PhaeoP54_03082 30fbccfcc1a10ba5b4e88bbba981f049 532 Gene3D G3DSA:3.90.228.20 216 518 3.1E-215 T 14-10-2018 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 PhaeoP54_03082 30fbccfcc1a10ba5b4e88bbba981f049 532 Gene3D G3DSA:2.170.8.10 42 335 3.1E-215 T 14-10-2018 PhaeoP54_03811 7e2cdcaaa276137c4fc9fbf20b0a91d1 403 Gene3D G3DSA:1.10.10.10 34 187 1.2E-6 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_03811 7e2cdcaaa276137c4fc9fbf20b0a91d1 403 Pfam PF03428 Replication protein C N-terminal domain 11 181 8.8E-56 T 14-10-2018 IPR005090 Replication protein C PhaeoP54_03811 7e2cdcaaa276137c4fc9fbf20b0a91d1 403 Pfam PF11800 Replication protein C C-terminal region 192 400 2.4E-63 T 14-10-2018 IPR021760 Replication protein-C C-terminal PhaeoP54_03811 7e2cdcaaa276137c4fc9fbf20b0a91d1 403 SUPERFAMILY SSF46785 84 185 3.6E-8 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_00766 40e794f47e71952b1afecc2c341da89c 229 Hamap MF_00165 Thymidylate kinase [tmk]. 19 220 28.245 T 14-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 PhaeoP54_00766 40e794f47e71952b1afecc2c341da89c 229 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 18 212 6.3E-49 T 14-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 PhaeoP54_00766 40e794f47e71952b1afecc2c341da89c 229 SUPERFAMILY SSF52540 18 219 5.2E-52 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_00766 40e794f47e71952b1afecc2c341da89c 229 Gene3D G3DSA:3.40.50.300 14 221 3.4E-63 T 14-10-2018 PhaeoP54_00766 40e794f47e71952b1afecc2c341da89c 229 Pfam PF02223 Thymidylate kinase 23 211 1.2E-48 T 14-10-2018 IPR039430 Thymidylate kinase-like domain KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 PhaeoP54_01527 801cb73bcbbbaf5446dde74691e8d348 251 TIGRFAM TIGR01978 sufC: FeS assembly ATPase SufC 2 245 1.1E-109 T 14-10-2018 IPR010230 FeS cluster assembly SUF system, ATPase SufC GO:0005524 PhaeoP54_01527 801cb73bcbbbaf5446dde74691e8d348 251 Gene3D G3DSA:3.40.50.300 1 249 1.5E-58 T 14-10-2018 PhaeoP54_01527 801cb73bcbbbaf5446dde74691e8d348 251 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PhaeoP54_01527 801cb73bcbbbaf5446dde74691e8d348 251 SUPERFAMILY SSF52540 2 239 5.2E-41 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_01527 801cb73bcbbbaf5446dde74691e8d348 251 SMART SM00382 28 232 1.1E-4 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_01527 801cb73bcbbbaf5446dde74691e8d348 251 Pfam PF00005 ABC transporter 19 174 7.0E-20 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PhaeoP54_00449 b487861b4184ce1227f5363c7fc4ae48 503 Hamap MF_01148 Apolipoprotein N-acyltransferase [lnt]. 14 485 19.925 T 14-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 PhaeoP54_00449 b487861b4184ce1227f5363c7fc4ae48 503 Pfam PF00795 Carbon-nitrogen hydrolase 240 465 3.0E-29 T 14-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 PhaeoP54_00449 b487861b4184ce1227f5363c7fc4ae48 503 TIGRFAM TIGR00546 lnt: apolipoprotein N-acyltransferase 70 448 1.5E-85 T 14-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 PhaeoP54_00449 b487861b4184ce1227f5363c7fc4ae48 503 Gene3D G3DSA:3.60.110.10 246 459 3.3E-18 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily PhaeoP54_00449 b487861b4184ce1227f5363c7fc4ae48 503 SUPERFAMILY SSF56317 220 479 6.54E-43 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily PhaeoP54_02462 dc977cdafa8af962b2b5f8ef15bfbd6a 190 Pfam PF01292 Prokaryotic cytochrome b561 14 184 2.5E-19 T 14-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 PhaeoP54_02462 dc977cdafa8af962b2b5f8ef15bfbd6a 190 SUPERFAMILY SSF81342 9 185 4.79E-23 T 14-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 PhaeoP54_00841 307ce48930c18ca840e650a34350ef5f 560 SUPERFAMILY SSF53300 153 539 9.13E-18 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily PhaeoP54_00841 307ce48930c18ca840e650a34350ef5f 560 Pfam PF13400 Putative Flp pilus-assembly TadE/G-like 43 81 2.0E-6 T 14-10-2018 IPR028087 Putative Flp pilus-assembly TadG-like, N-terminal PhaeoP54_00529 52a9f23fe82b01e236b9a85078c340a0 949 TIGRFAM TIGR00461 gcvP: glycine dehydrogenase 17 938 0.0 T 14-10-2018 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 PhaeoP54_00529 52a9f23fe82b01e236b9a85078c340a0 949 Gene3D G3DSA:3.90.1150.10 754 892 5.0E-41 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 PhaeoP54_00529 52a9f23fe82b01e236b9a85078c340a0 949 SUPERFAMILY SSF53383 468 940 2.19E-98 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PhaeoP54_00529 52a9f23fe82b01e236b9a85078c340a0 949 SUPERFAMILY SSF53383 17 438 1.71E-100 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PhaeoP54_00529 52a9f23fe82b01e236b9a85078c340a0 949 Pfam PF02347 Glycine cleavage system P-protein 16 439 1.3E-176 T 14-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 PhaeoP54_00529 52a9f23fe82b01e236b9a85078c340a0 949 Pfam PF02347 Glycine cleavage system P-protein 452 727 1.6E-11 T 14-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 PhaeoP54_00529 52a9f23fe82b01e236b9a85078c340a0 949 Gene3D G3DSA:3.40.640.10 96 353 1.1E-106 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PhaeoP54_00529 52a9f23fe82b01e236b9a85078c340a0 949 Gene3D G3DSA:3.40.640.10 516 739 6.4E-59 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PhaeoP54_00529 52a9f23fe82b01e236b9a85078c340a0 949 Hamap MF_00711 Glycine dehydrogenase (decarboxylating) [gcvP]. 8 944 25.088 T 14-10-2018 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 PhaeoP54_01113 30051f96ed3ee88a335312f4fa46c29e 143 Gene3D G3DSA:2.60.120.10 1 142 9.4E-53 T 14-10-2018 IPR014710 RmlC-like jelly roll fold PhaeoP54_01113 30051f96ed3ee88a335312f4fa46c29e 143 SUPERFAMILY SSF51182 1 137 1.06E-52 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily PhaeoP54_01113 30051f96ed3ee88a335312f4fa46c29e 143 Pfam PF06172 Cupin superfamily (DUF985) 5 133 9.5E-46 T 14-10-2018 IPR009327 Cupin domain of unknown function DUF985 PhaeoP54_01669 a962f221998747b39b7dfdda2ba3ddfd 613 Pfam PF13145 PPIC-type PPIASE domain 245 364 6.5E-14 T 14-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 PhaeoP54_01669 a962f221998747b39b7dfdda2ba3ddfd 613 Pfam PF13624 SurA N-terminal domain 6 157 2.7E-32 T 14-10-2018 PhaeoP54_01669 a962f221998747b39b7dfdda2ba3ddfd 613 SUPERFAMILY SSF54534 221 349 4.87E-7 T 14-10-2018 PhaeoP54_01669 a962f221998747b39b7dfdda2ba3ddfd 613 Gene3D G3DSA:1.10.4030.30 38 168 1.1E-5 T 14-10-2018 PhaeoP54_01669 a962f221998747b39b7dfdda2ba3ddfd 613 SUPERFAMILY SSF109998 38 248 3.22E-18 T 14-10-2018 IPR027304 Trigger factor/SurA domain superfamily PhaeoP54_01030 1e459b69648e52ae431743b5b29952e9 516 Pfam PF00270 DEAD/DEAH box helicase 26 194 1.3E-48 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 PhaeoP54_01030 1e459b69648e52ae431743b5b29952e9 516 Gene3D G3DSA:3.40.50.300 212 456 1.1E-51 T 14-10-2018 PhaeoP54_01030 1e459b69648e52ae431743b5b29952e9 516 SUPERFAMILY SSF52540 74 367 4.09E-73 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_01030 1e459b69648e52ae431743b5b29952e9 516 Gene3D G3DSA:3.40.50.300 1 209 2.2E-75 T 14-10-2018 PhaeoP54_01030 1e459b69648e52ae431743b5b29952e9 516 Pfam PF00271 Helicase conserved C-terminal domain 239 347 1.9E-30 T 14-10-2018 IPR001650 Helicase, C-terminal PhaeoP54_01030 1e459b69648e52ae431743b5b29952e9 516 SMART SM00490 266 347 1.3E-34 T 14-10-2018 IPR001650 Helicase, C-terminal PhaeoP54_01030 1e459b69648e52ae431743b5b29952e9 516 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 152 160 - T 14-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site PhaeoP54_01030 1e459b69648e52ae431743b5b29952e9 516 SMART SM00487 21 221 1.9E-61 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain PhaeoP54_03437 7d3b097157ce5d92c4a1c079d2370574 877 Pfam PF05188 MutS domain II 130 256 7.5E-18 T 14-10-2018 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 PhaeoP54_03437 7d3b097157ce5d92c4a1c079d2370574 877 PIRSF PIRSF037677 1 830 1.3E-145 T 14-10-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 PhaeoP54_03437 7d3b097157ce5d92c4a1c079d2370574 877 Pfam PF05190 MutS family domain IV 433 526 2.8E-23 T 14-10-2018 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 PhaeoP54_03437 7d3b097157ce5d92c4a1c079d2370574 877 Gene3D G3DSA:1.10.1420.10 391 513 2.1E-83 T 14-10-2018 PhaeoP54_03437 7d3b097157ce5d92c4a1c079d2370574 877 SUPERFAMILY SSF48334 271 573 1.26E-75 T 14-10-2018 IPR036187 DNA mismatch repair protein MutS, core domain superfamily PhaeoP54_03437 7d3b097157ce5d92c4a1c079d2370574 877 Pfam PF05192 MutS domain III 273 569 2.7E-35 T 14-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 PhaeoP54_03437 7d3b097157ce5d92c4a1c079d2370574 877 Pfam PF01624 MutS domain I 5 121 1.0E-40 T 14-10-2018 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 PhaeoP54_03437 7d3b097157ce5d92c4a1c079d2370574 877 Pfam PF00488 MutS domain V 626 813 5.5E-84 T 14-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 PhaeoP54_03437 7d3b097157ce5d92c4a1c079d2370574 877 Gene3D G3DSA:1.10.1420.10 270 569 2.1E-83 T 14-10-2018 PhaeoP54_03437 7d3b097157ce5d92c4a1c079d2370574 877 Gene3D G3DSA:3.40.50.300 580 827 2.2E-95 T 14-10-2018 PhaeoP54_03437 7d3b097157ce5d92c4a1c079d2370574 877 SUPERFAMILY SSF55271 3 117 1.96E-38 T 14-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 PhaeoP54_03437 7d3b097157ce5d92c4a1c079d2370574 877 SUPERFAMILY SSF53150 116 270 3.92E-36 T 14-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 PhaeoP54_03437 7d3b097157ce5d92c4a1c079d2370574 877 SUPERFAMILY SSF52540 577 814 3.77E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_03437 7d3b097157ce5d92c4a1c079d2370574 877 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 5 873 1.3E-263 T 14-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 PhaeoP54_03437 7d3b097157ce5d92c4a1c079d2370574 877 SMART SM00533 287 601 8.4E-84 T 14-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 PhaeoP54_03437 7d3b097157ce5d92c4a1c079d2370574 877 SMART SM00534 623 810 2.1E-111 T 14-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 PhaeoP54_03437 7d3b097157ce5d92c4a1c079d2370574 877 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 704 720 - T 14-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 PhaeoP54_03437 7d3b097157ce5d92c4a1c079d2370574 877 Gene3D G3DSA:3.30.420.110 129 264 1.7E-25 T 14-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 PhaeoP54_03437 7d3b097157ce5d92c4a1c079d2370574 877 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 4 868 23.361 T 14-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 PhaeoP54_03437 7d3b097157ce5d92c4a1c079d2370574 877 Gene3D G3DSA:3.40.1170.10 1 123 7.9E-47 T 14-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 PhaeoP54_03484 df5c4a57046d89e7d2eb1c71146ddf5d 140 Gene3D G3DSA:3.10.590.10 1 140 2.1E-59 T 14-10-2018 PhaeoP54_03484 df5c4a57046d89e7d2eb1c71146ddf5d 140 Pfam PF01878 EVE domain 2 133 3.8E-47 T 14-10-2018 IPR002740 EVE domain PhaeoP54_03484 df5c4a57046d89e7d2eb1c71146ddf5d 140 SUPERFAMILY SSF88697 1 137 9.94E-59 T 14-10-2018 IPR015947 PUA-like superfamily PhaeoP54_01565 842ce4079965199d538b03ba795ba82d 351 SUPERFAMILY SSF53850 17 336 1.65E-60 T 14-10-2018 PhaeoP54_01565 842ce4079965199d538b03ba795ba82d 351 Pfam PF12849 PBP superfamily domain 18 315 8.1E-47 T 14-10-2018 IPR024370 PBP domain PhaeoP54_01565 842ce4079965199d538b03ba795ba82d 351 Gene3D G3DSA:3.40.190.10 27 315 4.9E-43 T 14-10-2018 PhaeoP54_01565 842ce4079965199d538b03ba795ba82d 351 Gene3D G3DSA:3.40.190.10 111 288 4.9E-43 T 14-10-2018 PhaeoP54_03622 49d27b5f308ff246c9e89138008a3420 288 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 106 287 5.7E-23 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PhaeoP54_03622 49d27b5f308ff246c9e89138008a3420 288 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 17 65 2.6E-6 T 14-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain PhaeoP54_03622 49d27b5f308ff246c9e89138008a3420 288 Gene3D G3DSA:1.10.3720.10 79 282 5.2E-16 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_03622 49d27b5f308ff246c9e89138008a3420 288 SUPERFAMILY SSF161098 84 268 6.28E-23 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_02733 0bbd9f5396c5ac2595c921b8b539972e 377 PIRSF PIRSF033093 3 375 4.4E-73 T 14-10-2018 IPR014577 Uncharacterised conserved protein UCP033093, metallophosphoesterase-type PhaeoP54_02733 0bbd9f5396c5ac2595c921b8b539972e 377 Gene3D G3DSA:3.60.21.10 1 245 1.9E-31 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like PhaeoP54_02733 0bbd9f5396c5ac2595c921b8b539972e 377 Pfam PF00149 Calcineurin-like phosphoesterase 4 102 1.7E-11 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 PhaeoP54_02733 0bbd9f5396c5ac2595c921b8b539972e 377 SUPERFAMILY SSF56300 4 275 4.56E-31 T 14-10-2018 PhaeoP54_03378 c7c48f37688def6397f5ea66c1d17b23 361 Gene3D G3DSA:3.40.190.10 25 329 6.5E-128 T 14-10-2018 PhaeoP54_03378 c7c48f37688def6397f5ea66c1d17b23 361 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 43 64 5.4E-57 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PhaeoP54_03378 c7c48f37688def6397f5ea66c1d17b23 361 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 70 84 5.4E-57 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PhaeoP54_03378 c7c48f37688def6397f5ea66c1d17b23 361 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 173 192 5.4E-57 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PhaeoP54_03378 c7c48f37688def6397f5ea66c1d17b23 361 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 86 99 5.4E-57 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PhaeoP54_03378 c7c48f37688def6397f5ea66c1d17b23 361 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 305 331 5.4E-57 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PhaeoP54_03378 c7c48f37688def6397f5ea66c1d17b23 361 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 260 279 5.4E-57 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PhaeoP54_03378 c7c48f37688def6397f5ea66c1d17b23 361 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 27 43 5.4E-57 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PhaeoP54_03378 c7c48f37688def6397f5ea66c1d17b23 361 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 210 229 5.4E-57 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PhaeoP54_03378 c7c48f37688def6397f5ea66c1d17b23 361 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 119 135 5.4E-57 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PhaeoP54_03378 c7c48f37688def6397f5ea66c1d17b23 361 SUPERFAMILY SSF53850 22 360 3.01E-97 T 14-10-2018 PhaeoP54_03378 c7c48f37688def6397f5ea66c1d17b23 361 Pfam PF13416 Bacterial extracellular solute-binding protein 37 325 1.2E-26 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein PhaeoP54_03378 c7c48f37688def6397f5ea66c1d17b23 361 Gene3D G3DSA:3.40.190.10 128 355 6.5E-128 T 14-10-2018 PhaeoP54_03378 c7c48f37688def6397f5ea66c1d17b23 361 PIRSF PIRSF019574 1 361 1.3E-131 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PhaeoP54_03042 eedad3237e7889f0932a3b451b773037 123 Pfam PF00164 Ribosomal protein S12/S23 12 123 9.0E-42 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PhaeoP54_03042 eedad3237e7889f0932a3b451b773037 123 SUPERFAMILY SSF50249 2 123 2.14E-52 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold PhaeoP54_03042 eedad3237e7889f0932a3b451b773037 123 PRINTS PR01034 Ribosomal protein S12 signature 27 42 1.5E-60 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PhaeoP54_03042 eedad3237e7889f0932a3b451b773037 123 PRINTS PR01034 Ribosomal protein S12 signature 94 110 1.5E-60 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PhaeoP54_03042 eedad3237e7889f0932a3b451b773037 123 PRINTS PR01034 Ribosomal protein S12 signature 58 77 1.5E-60 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PhaeoP54_03042 eedad3237e7889f0932a3b451b773037 123 PRINTS PR01034 Ribosomal protein S12 signature 42 57 1.5E-60 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PhaeoP54_03042 eedad3237e7889f0932a3b451b773037 123 PRINTS PR01034 Ribosomal protein S12 signature 110 122 1.5E-60 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PhaeoP54_03042 eedad3237e7889f0932a3b451b773037 123 PRINTS PR01034 Ribosomal protein S12 signature 77 94 1.5E-60 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PhaeoP54_03042 eedad3237e7889f0932a3b451b773037 123 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PhaeoP54_03042 eedad3237e7889f0932a3b451b773037 123 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 123 7.7E-68 T 14-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PhaeoP54_03042 eedad3237e7889f0932a3b451b773037 123 Gene3D G3DSA:2.40.50.140 1 123 1.2E-62 T 14-10-2018 PhaeoP54_03042 eedad3237e7889f0932a3b451b773037 123 PIRSF PIRSF002133 1 123 5.2E-54 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PhaeoP54_03042 eedad3237e7889f0932a3b451b773037 123 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 38.323 T 14-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PhaeoP54_02792 565864e4644c501c60d54f323a059cf0 305 SUPERFAMILY SSF103481 63 162 1.83E-7 T 14-10-2018 PhaeoP54_02792 565864e4644c501c60d54f323a059cf0 305 SUPERFAMILY SSF103481 205 302 1.05E-9 T 14-10-2018 PhaeoP54_02792 565864e4644c501c60d54f323a059cf0 305 Pfam PF00892 EamA-like transporter family 25 159 8.7E-9 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 PhaeoP54_02792 565864e4644c501c60d54f323a059cf0 305 Pfam PF00892 EamA-like transporter family 174 297 1.7E-9 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 PhaeoP54_02093 7e2d56e715862cb27cd7c06c2e972011 592 Pfam PF03600 Citrate transporter 23 538 9.0E-37 T 14-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 PhaeoP54_02093 7e2d56e715862cb27cd7c06c2e972011 592 Pfam PF02080 TrkA-C domain 313 380 2.6E-11 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 PhaeoP54_02093 7e2d56e715862cb27cd7c06c2e972011 592 SUPERFAMILY SSF116726 308 383 9.94E-17 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 PhaeoP54_02093 7e2d56e715862cb27cd7c06c2e972011 592 ProSitePatterns PS01271 Sodium:sulfate symporter family signature. 540 556 - T 14-10-2018 IPR031312 Sodium/sulphate symporter, conserved site Reactome: R-HSA-433137 PhaeoP54_02093 7e2d56e715862cb27cd7c06c2e972011 592 SUPERFAMILY SSF116726 226 300 3.79E-11 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 PhaeoP54_02093 7e2d56e715862cb27cd7c06c2e972011 592 Gene3D G3DSA:3.30.70.1450 308 384 2.4E-15 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 PhaeoP54_02093 7e2d56e715862cb27cd7c06c2e972011 592 Gene3D G3DSA:3.30.70.1450 225 301 2.3E-7 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 PhaeoP54_03375 e7f631803b17fed48cf3e84705b552b3 366 Pfam PF08402 TOBE domain 286 364 3.1E-16 T 14-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 PhaeoP54_03375 e7f631803b17fed48cf3e84705b552b3 366 SMART SM00382 36 219 2.4E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_03375 e7f631803b17fed48cf3e84705b552b3 366 SUPERFAMILY SSF50331 244 364 6.23E-21 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal PhaeoP54_03375 e7f631803b17fed48cf3e84705b552b3 366 Gene3D G3DSA:3.40.50.300 4 246 1.2E-74 T 14-10-2018 PhaeoP54_03375 e7f631803b17fed48cf3e84705b552b3 366 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PhaeoP54_03375 e7f631803b17fed48cf3e84705b552b3 366 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 42 362 1.9E-115 T 14-10-2018 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 PhaeoP54_03375 e7f631803b17fed48cf3e84705b552b3 366 Pfam PF00005 ABC transporter 28 169 9.8E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PhaeoP54_03375 e7f631803b17fed48cf3e84705b552b3 366 Gene3D G3DSA:2.40.50.140 247 288 1.0E-5 T 14-10-2018 PhaeoP54_03375 e7f631803b17fed48cf3e84705b552b3 366 Gene3D G3DSA:2.40.50.100 289 352 1.0E-5 T 14-10-2018 PhaeoP54_03375 e7f631803b17fed48cf3e84705b552b3 366 SUPERFAMILY SSF52540 11 249 1.31E-83 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_00333 bb63b8bc243427dafe44aa3e487d10a9 397 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 267 291 - T 14-10-2018 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 PhaeoP54_00333 bb63b8bc243427dafe44aa3e487d10a9 397 Gene3D G3DSA:3.30.470.20 1 244 1.3E-87 T 14-10-2018 PhaeoP54_00333 bb63b8bc243427dafe44aa3e487d10a9 397 Pfam PF08442 ATP-grasp domain 2 212 1.3E-74 T 14-10-2018 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 PhaeoP54_00333 bb63b8bc243427dafe44aa3e487d10a9 397 Gene3D G3DSA:3.30.1490.20 21 114 1.3E-87 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 PhaeoP54_00333 bb63b8bc243427dafe44aa3e487d10a9 397 Gene3D G3DSA:3.40.50.261 250 397 8.6E-58 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 PhaeoP54_00333 bb63b8bc243427dafe44aa3e487d10a9 397 PIRSF PIRSF001554 1 397 2.3E-150 T 14-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 PhaeoP54_00333 bb63b8bc243427dafe44aa3e487d10a9 397 Hamap MF_00558 Succinate--CoA ligase [ADP-forming] subunit beta [sucC]. 1 396 43.146 T 14-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 PhaeoP54_00333 bb63b8bc243427dafe44aa3e487d10a9 397 SUPERFAMILY SSF52210 249 395 3.53E-54 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 PhaeoP54_00333 bb63b8bc243427dafe44aa3e487d10a9 397 Pfam PF00549 CoA-ligase 272 390 3.8E-27 T 14-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 PhaeoP54_00333 bb63b8bc243427dafe44aa3e487d10a9 397 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 395 1.3E-158 T 14-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 PhaeoP54_00333 bb63b8bc243427dafe44aa3e487d10a9 397 SUPERFAMILY SSF56059 1 248 1.38E-76 T 14-10-2018 PhaeoP54_00367 9b119e3f4a4fe134031daacdb2873bea 509 Pfam PF00005 ABC transporter 274 433 5.7E-13 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PhaeoP54_00367 9b119e3f4a4fe134031daacdb2873bea 509 Gene3D G3DSA:3.40.50.300 255 504 4.8E-36 T 14-10-2018 PhaeoP54_00367 9b119e3f4a4fe134031daacdb2873bea 509 SMART SM00382 30 218 6.4E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_00367 9b119e3f4a4fe134031daacdb2873bea 509 SMART SM00382 283 489 5.9 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_00367 9b119e3f4a4fe134031daacdb2873bea 509 SUPERFAMILY SSF52540 4 227 1.12E-55 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_00367 9b119e3f4a4fe134031daacdb2873bea 509 SUPERFAMILY SSF52540 241 491 5.12E-38 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_00367 9b119e3f4a4fe134031daacdb2873bea 509 ProSitePatterns PS00211 ABC transporters family signature. 406 420 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PhaeoP54_00367 9b119e3f4a4fe134031daacdb2873bea 509 Gene3D G3DSA:3.40.50.300 1 242 2.0E-58 T 14-10-2018 PhaeoP54_00367 9b119e3f4a4fe134031daacdb2873bea 509 Pfam PF00005 ABC transporter 22 169 8.9E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PhaeoP54_02278 d9fda4752444203f3443d07cd3ad61fe 666 SUPERFAMILY SSF90123 65 373 1.31E-62 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 PhaeoP54_02278 d9fda4752444203f3443d07cd3ad61fe 666 SMART SM00382 416 602 4.6E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_02278 d9fda4752444203f3443d07cd3ad61fe 666 Pfam PF00664 ABC transporter transmembrane region 76 341 3.4E-30 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 PhaeoP54_02278 d9fda4752444203f3443d07cd3ad61fe 666 Gene3D G3DSA:3.40.50.300 386 627 5.5E-85 T 14-10-2018 PhaeoP54_02278 d9fda4752444203f3443d07cd3ad61fe 666 ProSitePatterns PS00211 ABC transporters family signature. 528 542 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PhaeoP54_02278 d9fda4752444203f3443d07cd3ad61fe 666 SUPERFAMILY SSF52540 384 627 7.38E-85 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_02278 d9fda4752444203f3443d07cd3ad61fe 666 Pfam PF00005 ABC transporter 407 556 1.3E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PhaeoP54_02278 d9fda4752444203f3443d07cd3ad61fe 666 Gene3D G3DSA:1.20.1560.10 41 375 7.1E-65 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 PhaeoP54_00803 54bce1149078ac167c4cfb36859f2a70 572 SUPERFAMILY SSF57770 139 173 6.54E-12 T 14-10-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 PhaeoP54_00803 54bce1149078ac167c4cfb36859f2a70 572 Pfam PF09334 tRNA synthetases class I (M) 4 409 9.2E-144 T 14-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 PhaeoP54_00803 54bce1149078ac167c4cfb36859f2a70 572 SUPERFAMILY SSF52374 3 397 1.24E-81 T 14-10-2018 PhaeoP54_00803 54bce1149078ac167c4cfb36859f2a70 572 Gene3D G3DSA:3.40.50.620 5 392 1.9E-142 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PhaeoP54_00803 54bce1149078ac167c4cfb36859f2a70 572 Gene3D G3DSA:1.10.730.10 393 568 7.1E-40 T 14-10-2018 PhaeoP54_00803 54bce1149078ac167c4cfb36859f2a70 572 PRINTS PR01041 Methionyl-tRNA synthetase signature 6 19 3.0E-28 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 PhaeoP54_00803 54bce1149078ac167c4cfb36859f2a70 572 PRINTS PR01041 Methionyl-tRNA synthetase signature 39 53 3.0E-28 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 PhaeoP54_00803 54bce1149078ac167c4cfb36859f2a70 572 PRINTS PR01041 Methionyl-tRNA synthetase signature 87 98 3.0E-28 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 PhaeoP54_00803 54bce1149078ac167c4cfb36859f2a70 572 PRINTS PR01041 Methionyl-tRNA synthetase signature 258 269 3.0E-28 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 PhaeoP54_00803 54bce1149078ac167c4cfb36859f2a70 572 PRINTS PR01041 Methionyl-tRNA synthetase signature 303 318 3.0E-28 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 PhaeoP54_00803 54bce1149078ac167c4cfb36859f2a70 572 PRINTS PR01041 Methionyl-tRNA synthetase signature 397 408 3.0E-28 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 PhaeoP54_00803 54bce1149078ac167c4cfb36859f2a70 572 SUPERFAMILY SSF47323 398 555 2.62E-36 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 PhaeoP54_00803 54bce1149078ac167c4cfb36859f2a70 572 Hamap MF_00098 Methionine--tRNA ligase [metG]. 2 566 37.661 T 14-10-2018 IPR023458 Methionine-tRNA ligase, type 1 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 PhaeoP54_00803 54bce1149078ac167c4cfb36859f2a70 572 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 4 555 5.4E-138 T 14-10-2018 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 PhaeoP54_00803 54bce1149078ac167c4cfb36859f2a70 572 Gene3D G3DSA:2.20.28.20 139 173 1.9E-142 T 14-10-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 PhaeoP54_01171 0e383d1d26cead6ddb7fce1e79839977 629 SUPERFAMILY SSF56801 3 622 7.85E-151 T 14-10-2018 PhaeoP54_01171 0e383d1d26cead6ddb7fce1e79839977 629 Pfam PF00501 AMP-binding enzyme 64 500 3.8E-84 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 PhaeoP54_01171 0e383d1d26cead6ddb7fce1e79839977 629 Gene3D G3DSA:3.40.50.12780 31 493 5.1E-103 T 14-10-2018 PhaeoP54_01171 0e383d1d26cead6ddb7fce1e79839977 629 Gene3D G3DSA:3.30.300.30 496 625 1.7E-21 T 14-10-2018 PhaeoP54_01171 0e383d1d26cead6ddb7fce1e79839977 629 Pfam PF13193 AMP-binding enzyme C-terminal domain 510 588 1.6E-22 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain PhaeoP54_01171 0e383d1d26cead6ddb7fce1e79839977 629 ProSitePatterns PS00455 Putative AMP-binding domain signature. 236 247 - T 14-10-2018 IPR020845 AMP-binding, conserved site PhaeoP54_01171 0e383d1d26cead6ddb7fce1e79839977 629 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 3 57 7.9E-14 T 14-10-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 PhaeoP54_02950 f872771bd88dd52d539409edde1a4adf 222 SUPERFAMILY SSF46785 18 90 1.51E-11 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_02950 f872771bd88dd52d539409edde1a4adf 222 Pfam PF07729 FCD domain 92 210 5.9E-17 T 14-10-2018 IPR011711 GntR, C-terminal PhaeoP54_02950 f872771bd88dd52d539409edde1a4adf 222 Pfam PF00392 Bacterial regulatory proteins, gntR family 22 74 1.2E-12 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PhaeoP54_02950 f872771bd88dd52d539409edde1a4adf 222 SMART SM00895 92 215 4.9E-11 T 14-10-2018 IPR011711 GntR, C-terminal PhaeoP54_02950 f872771bd88dd52d539409edde1a4adf 222 SUPERFAMILY SSF48008 88 220 6.8E-16 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal PhaeoP54_02950 f872771bd88dd52d539409edde1a4adf 222 Gene3D G3DSA:1.10.10.10 17 80 8.5E-14 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_02950 f872771bd88dd52d539409edde1a4adf 222 Gene3D G3DSA:1.20.120.530 86 221 1.4E-19 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal PhaeoP54_03613 c6314f749cf5a8f101dc0bc3c86129d3 494 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 263 270 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 PhaeoP54_03613 c6314f749cf5a8f101dc0bc3c86129d3 494 Pfam PF00171 Aldehyde dehydrogenase family 35 490 3.3E-157 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 PhaeoP54_03613 c6314f749cf5a8f101dc0bc3c86129d3 494 Gene3D G3DSA:3.40.309.10 268 460 1.2E-155 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 PhaeoP54_03613 c6314f749cf5a8f101dc0bc3c86129d3 494 SUPERFAMILY SSF53720 19 492 6.15E-150 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 PhaeoP54_03613 c6314f749cf5a8f101dc0bc3c86129d3 494 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 291 302 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 PhaeoP54_03613 c6314f749cf5a8f101dc0bc3c86129d3 494 Gene3D G3DSA:3.40.605.10 25 488 1.2E-155 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 PhaeoP54_00899 31e80c8f8d1c735677612f230fad36ba 243 SUPERFAMILY SSF46689 193 239 2.64E-6 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PhaeoP54_00899 31e80c8f8d1c735677612f230fad36ba 243 SMART SM00342 157 239 8.0E-21 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PhaeoP54_00899 31e80c8f8d1c735677612f230fad36ba 243 Pfam PF12833 Helix-turn-helix domain 163 239 6.1E-17 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PhaeoP54_00899 31e80c8f8d1c735677612f230fad36ba 243 SUPERFAMILY SSF46689 140 191 1.21E-7 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PhaeoP54_00899 31e80c8f8d1c735677612f230fad36ba 243 Gene3D G3DSA:1.10.10.60 137 243 4.9E-20 T 14-10-2018 PhaeoP54_00899 31e80c8f8d1c735677612f230fad36ba 243 Pfam PF12852 Cupin 51 125 3.7E-11 T 14-10-2018 IPR032783 AraC-type transcription regulator, ligand-binding domain PhaeoP54_00899 31e80c8f8d1c735677612f230fad36ba 243 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 194 235 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 PhaeoP54_00354 f429a51917f0b5d9a77faa4a4af083fe 105 SMART SM00528 60 105 8.6E-17 T 14-10-2018 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 PhaeoP54_00354 f429a51917f0b5d9a77faa4a4af083fe 105 SUPERFAMILY SSF81273 64 105 4.71E-12 T 14-10-2018 PhaeoP54_00354 f429a51917f0b5d9a77faa4a4af083fe 105 Pfam PF00816 H-NS histone family 12 97 1.7E-26 T 14-10-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 PhaeoP54_00354 f429a51917f0b5d9a77faa4a4af083fe 105 Gene3D G3DSA:4.10.430.10 56 105 1.9E-15 T 14-10-2018 IPR037150 Histone-like protein H-NS, C-terminal domain superfamily GO:0003677 PhaeoP54_00401 4b42efcc6ee29733ac0335daf97ce551 227 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PhaeoP54_00401 4b42efcc6ee29733ac0335daf97ce551 227 SUPERFAMILY SSF52540 1 217 1.77E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_00401 4b42efcc6ee29733ac0335daf97ce551 227 Gene3D G3DSA:3.40.50.300 1 221 1.5E-50 T 14-10-2018 PhaeoP54_00401 4b42efcc6ee29733ac0335daf97ce551 227 Pfam PF00005 ABC transporter 26 174 1.8E-25 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PhaeoP54_00401 4b42efcc6ee29733ac0335daf97ce551 227 TIGRFAM TIGR02324 CP_lyasePhnL: phosphonate C-P lyase system protein PhnL 1 218 1.9E-95 T 14-10-2018 IPR012701 Phosphonate C-P lyase system, PhnL KEGG: 00440+2.7.8.37|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 PhaeoP54_00401 4b42efcc6ee29733ac0335daf97ce551 227 SMART SM00382 33 212 1.2E-5 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_02385 56d6e30a01ebec689b4d8a947122bb8c 156 PIRSF PIRSF006173 7 156 2.2E-64 T 14-10-2018 IPR008228 Uncharacterised conserved protein UCP006173 PhaeoP54_02385 56d6e30a01ebec689b4d8a947122bb8c 156 Pfam PF03692 Putative zinc- or iron-chelating domain 32 101 7.6E-9 T 14-10-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein PhaeoP54_02385 56d6e30a01ebec689b4d8a947122bb8c 156 Hamap MF_00676 UPF0260 protein YcgN [ycgN]. 10 156 40.855 T 14-10-2018 IPR008228 Uncharacterised conserved protein UCP006173 PhaeoP54_03527 68f6ed246b5d42287f7e641dac0499a2 96 Pfam PF10135 Rod binding protein 39 86 4.5E-8 T 14-10-2018 IPR019301 Flagellar protein FlgJ, N-terminal PhaeoP54_01316 ef842cc7893b25f2650e55fb61204696 342 Gene3D G3DSA:3.20.20.70 127 326 8.6E-11 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PhaeoP54_01316 ef842cc7893b25f2650e55fb61204696 342 Pfam PF04055 Radical SAM superfamily 55 232 3.3E-18 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 PhaeoP54_01316 ef842cc7893b25f2650e55fb61204696 342 SUPERFAMILY SSF102114 45 283 4.58E-17 T 14-10-2018 PhaeoP54_01316 ef842cc7893b25f2650e55fb61204696 342 SMART SM00729 51 279 4.5E-12 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 PhaeoP54_03253 73429224cb584bbc2c77811cbe5e7f2d 175 Pfam PF13560 Helix-turn-helix domain 1 53 1.1E-11 T 14-10-2018 PhaeoP54_03253 73429224cb584bbc2c77811cbe5e7f2d 175 SUPERFAMILY SSF47413 1 57 2.46E-13 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 PhaeoP54_03253 73429224cb584bbc2c77811cbe5e7f2d 175 Pfam PF07883 Cupin domain 118 169 4.2E-7 T 14-10-2018 IPR013096 Cupin 2, conserved barrel PhaeoP54_03253 73429224cb584bbc2c77811cbe5e7f2d 175 Gene3D G3DSA:1.10.260.40 1 61 8.2E-15 T 14-10-2018 PhaeoP54_03253 73429224cb584bbc2c77811cbe5e7f2d 175 SUPERFAMILY SSF51182 41 173 1.35E-24 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily PhaeoP54_03253 73429224cb584bbc2c77811cbe5e7f2d 175 Gene3D G3DSA:2.60.120.10 94 175 3.3E-11 T 14-10-2018 IPR014710 RmlC-like jelly roll fold PhaeoP54_03253 73429224cb584bbc2c77811cbe5e7f2d 175 SMART SM00530 1 55 5.9E-8 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PhaeoP54_01719 a1aaa9b2f94f16aca3b9cfd35a27dbb7 333 Gene3D G3DSA:3.40.50.720 4 324 1.2E-133 T 14-10-2018 PhaeoP54_01719 a1aaa9b2f94f16aca3b9cfd35a27dbb7 333 PIRSF PIRSF000149 1 333 1.5E-125 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 PhaeoP54_01719 a1aaa9b2f94f16aca3b9cfd35a27dbb7 333 SUPERFAMILY SSF51735 1 174 2.45E-51 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PhaeoP54_01719 a1aaa9b2f94f16aca3b9cfd35a27dbb7 333 Gene3D G3DSA:3.30.360.10 150 314 1.2E-133 T 14-10-2018 PhaeoP54_01719 a1aaa9b2f94f16aca3b9cfd35a27dbb7 333 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 324 3.3E-120 T 14-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 PhaeoP54_01719 a1aaa9b2f94f16aca3b9cfd35a27dbb7 333 SUPERFAMILY SSF55347 151 313 1.61E-66 T 14-10-2018 PhaeoP54_01719 a1aaa9b2f94f16aca3b9cfd35a27dbb7 333 SMART SM00846 3 151 1.1E-71 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 PhaeoP54_01719 a1aaa9b2f94f16aca3b9cfd35a27dbb7 333 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 102 6.4E-29 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 PhaeoP54_01719 a1aaa9b2f94f16aca3b9cfd35a27dbb7 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 109 122 1.1E-35 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 PhaeoP54_01719 a1aaa9b2f94f16aca3b9cfd35a27dbb7 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 145 163 1.1E-35 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 PhaeoP54_01719 a1aaa9b2f94f16aca3b9cfd35a27dbb7 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 228 245 1.1E-35 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 PhaeoP54_01719 a1aaa9b2f94f16aca3b9cfd35a27dbb7 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 268 283 1.1E-35 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 PhaeoP54_01719 a1aaa9b2f94f16aca3b9cfd35a27dbb7 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 172 188 1.1E-35 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 PhaeoP54_01719 a1aaa9b2f94f16aca3b9cfd35a27dbb7 333 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 156 312 1.9E-60 T 14-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 PhaeoP54_01983 6b1bb387987dec389da06972c23f6ce0 277 Gene3D G3DSA:3.30.950.10 146 274 2.6E-30 T 14-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 PhaeoP54_01983 6b1bb387987dec389da06972c23f6ce0 277 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 32 241 4.7E-45 T 14-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 PhaeoP54_01983 6b1bb387987dec389da06972c23f6ce0 277 Gene3D G3DSA:3.40.1010.10 28 145 1.6E-37 T 14-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 PhaeoP54_01983 6b1bb387987dec389da06972c23f6ce0 277 SUPERFAMILY SSF53790 28 259 2.62E-60 T 14-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 PhaeoP54_01983 6b1bb387987dec389da06972c23f6ce0 277 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 30 259 6.6E-73 T 14-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 PhaeoP54_01380 25a2c78f678ce261cb59d4a9d85c40cf 434 Hamap MF_00455 Xylose isomerase [xylA]. 8 434 49.52 T 14-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 PhaeoP54_01380 25a2c78f678ce261cb59d4a9d85c40cf 434 TIGRFAM TIGR02630 xylose_isom_A: xylose isomerase 4 434 5.1E-196 T 14-10-2018 IPR013452 Xylose isomerase, bacterial-type GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 PhaeoP54_01380 25a2c78f678ce261cb59d4a9d85c40cf 434 Gene3D G3DSA:3.20.20.150 3 434 1.8E-162 T 14-10-2018 PhaeoP54_01380 25a2c78f678ce261cb59d4a9d85c40cf 434 PRINTS PR00688 Xylose isomerase signature 297 308 2.0E-77 T 14-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 PhaeoP54_01380 25a2c78f678ce261cb59d4a9d85c40cf 434 PRINTS PR00688 Xylose isomerase signature 177 198 2.0E-77 T 14-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 PhaeoP54_01380 25a2c78f678ce261cb59d4a9d85c40cf 434 PRINTS PR00688 Xylose isomerase signature 330 341 2.0E-77 T 14-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 PhaeoP54_01380 25a2c78f678ce261cb59d4a9d85c40cf 434 PRINTS PR00688 Xylose isomerase signature 89 111 2.0E-77 T 14-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 PhaeoP54_01380 25a2c78f678ce261cb59d4a9d85c40cf 434 PRINTS PR00688 Xylose isomerase signature 130 150 2.0E-77 T 14-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 PhaeoP54_01380 25a2c78f678ce261cb59d4a9d85c40cf 434 PRINTS PR00688 Xylose isomerase signature 153 172 2.0E-77 T 14-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 PhaeoP54_01380 25a2c78f678ce261cb59d4a9d85c40cf 434 PRINTS PR00688 Xylose isomerase signature 204 223 2.0E-77 T 14-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 PhaeoP54_01380 25a2c78f678ce261cb59d4a9d85c40cf 434 PRINTS PR00688 Xylose isomerase signature 226 250 2.0E-77 T 14-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 PhaeoP54_01380 25a2c78f678ce261cb59d4a9d85c40cf 434 PRINTS PR00688 Xylose isomerase signature 268 295 2.0E-77 T 14-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 PhaeoP54_01380 25a2c78f678ce261cb59d4a9d85c40cf 434 SUPERFAMILY SSF51658 15 433 1.76E-158 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily PhaeoP54_01908 836b4118900378e233db8d1494e11705 367 Gene3D G3DSA:3.40.190.10 54 361 7.8E-96 T 14-10-2018 PhaeoP54_01908 836b4118900378e233db8d1494e11705 367 Gene3D G3DSA:3.40.190.10 150 273 7.8E-96 T 14-10-2018 PhaeoP54_01908 836b4118900378e233db8d1494e11705 367 Pfam PF13416 Bacterial extracellular solute-binding protein 67 326 2.7E-26 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein PhaeoP54_01908 836b4118900378e233db8d1494e11705 367 SUPERFAMILY SSF53850 47 338 5.18E-50 T 14-10-2018 PhaeoP54_03198 baaad07484cfcfeda7a0798e67a4e8b6 114 Pfam PF09851 Short C-terminal domain 6 33 3.1E-6 T 14-10-2018 IPR018649 SHOCT domain PhaeoP54_02802 d97cd29c1784b54f0605fcdee838823e 329 Gene3D G3DSA:3.40.1190.20 11 312 6.0E-80 T 14-10-2018 IPR029056 Ribokinase-like PhaeoP54_02802 d97cd29c1784b54f0605fcdee838823e 329 SUPERFAMILY SSF53613 1 316 8.11E-76 T 14-10-2018 IPR029056 Ribokinase-like PhaeoP54_02802 d97cd29c1784b54f0605fcdee838823e 329 Gene3D G3DSA:3.30.1110.10 14 131 6.0E-80 T 14-10-2018 PhaeoP54_02802 d97cd29c1784b54f0605fcdee838823e 329 Pfam PF00294 pfkB family carbohydrate kinase 35 314 6.9E-45 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB PhaeoP54_02697 c52922bfcb226cd009b40719fe4994de 280 Gene3D G3DSA:1.10.3720.10 2 272 2.4E-52 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_02697 c52922bfcb226cd009b40719fe4994de 280 SUPERFAMILY SSF161098 7 280 1.21E-60 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_02697 c52922bfcb226cd009b40719fe4994de 280 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 91 273 1.8E-15 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PhaeoP54_00986 a1d481e7176110b51dd95408bb3cc82e 388 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 14 372 1.8E-101 T 14-10-2018 IPR017439 Amidohydrolase GO:0016787 PhaeoP54_00986 a1d481e7176110b51dd95408bb3cc82e 388 SUPERFAMILY SSF55031 187 295 2.75E-27 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain PhaeoP54_00986 a1d481e7176110b51dd95408bb3cc82e 388 Pfam PF07687 Peptidase dimerisation domain 189 279 5.0E-7 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain PhaeoP54_00986 a1d481e7176110b51dd95408bb3cc82e 388 Gene3D G3DSA:3.30.70.360 184 299 3.0E-129 T 14-10-2018 PhaeoP54_00986 a1d481e7176110b51dd95408bb3cc82e 388 PIRSF PIRSF005962 2 387 7.6E-117 T 14-10-2018 IPR017439 Amidohydrolase GO:0016787 PhaeoP54_00986 a1d481e7176110b51dd95408bb3cc82e 388 Gene3D G3DSA:3.40.630.10 15 369 3.0E-129 T 14-10-2018 PhaeoP54_00986 a1d481e7176110b51dd95408bb3cc82e 388 SUPERFAMILY SSF53187 2 384 3.46E-82 T 14-10-2018 PhaeoP54_00986 a1d481e7176110b51dd95408bb3cc82e 388 Pfam PF01546 Peptidase family M20/M25/M40 76 382 1.2E-37 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 PhaeoP54_00609 25f4814c95a0d9f5e2affc7b5a06c38c 286 TIGRFAM TIGR01694 MTAP: methylthioadenosine phosphorylase 1 237 3.4E-92 T 14-10-2018 IPR010044 Methylthioadenosine phosphorylase (MTAP) GO:0017061 Reactome: R-HSA-1237112|Reactome: R-HSA-8950505 PhaeoP54_00609 25f4814c95a0d9f5e2affc7b5a06c38c 286 Pfam PF01048 Phosphorylase superfamily 2 238 4.3E-47 T 14-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 PhaeoP54_00609 25f4814c95a0d9f5e2affc7b5a06c38c 286 SUPERFAMILY SSF53167 1 267 4.87E-95 T 14-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 PhaeoP54_00609 25f4814c95a0d9f5e2affc7b5a06c38c 286 Hamap MF_01963 S-methyl-5'-thioadenosine phosphorylase [mtnP]. 1 267 40.288 T 14-10-2018 IPR010044 Methylthioadenosine phosphorylase (MTAP) GO:0017061 Reactome: R-HSA-1237112|Reactome: R-HSA-8950505 PhaeoP54_00609 25f4814c95a0d9f5e2affc7b5a06c38c 286 Gene3D G3DSA:3.40.50.1580 1 281 3.2E-98 T 14-10-2018 PhaeoP54_03728 8a5c3aed7f33f6d65d74f906f03ba9f8 303 SUPERFAMILY SSF53850 90 296 4.19E-50 T 14-10-2018 PhaeoP54_03728 8a5c3aed7f33f6d65d74f906f03ba9f8 303 Gene3D G3DSA:3.40.190.10 91 289 3.2E-71 T 14-10-2018 PhaeoP54_03728 8a5c3aed7f33f6d65d74f906f03ba9f8 303 Gene3D G3DSA:1.10.10.10 4 89 1.7E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_03728 8a5c3aed7f33f6d65d74f906f03ba9f8 303 Gene3D G3DSA:3.40.190.10 163 263 3.2E-71 T 14-10-2018 PhaeoP54_03728 8a5c3aed7f33f6d65d74f906f03ba9f8 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 63 5.2E-20 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PhaeoP54_03728 8a5c3aed7f33f6d65d74f906f03ba9f8 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 5.2E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PhaeoP54_03728 8a5c3aed7f33f6d65d74f906f03ba9f8 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 5.2E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PhaeoP54_03728 8a5c3aed7f33f6d65d74f906f03ba9f8 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 5.2E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PhaeoP54_03728 8a5c3aed7f33f6d65d74f906f03ba9f8 303 SUPERFAMILY SSF46785 3 111 6.31E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_03728 8a5c3aed7f33f6d65d74f906f03ba9f8 303 Pfam PF03466 LysR substrate binding domain 88 292 3.3E-50 T 14-10-2018 IPR005119 LysR, substrate-binding PhaeoP54_02358 7b07d026a80290e0e302f5fc587bf46e 355 Pfam PF02636 Putative S-adenosyl-L-methionine-dependent methyltransferase 60 283 4.2E-62 T 14-10-2018 IPR003788 Protein arginine methyltransferase NDUFAF7 Reactome: R-HSA-6799198 PhaeoP54_02358 7b07d026a80290e0e302f5fc587bf46e 355 Gene3D G3DSA:3.40.50.12710 1 350 7.2E-106 T 14-10-2018 IPR038375 Protein arginine methyltransferase NDUFAF7 superfamily Reactome: R-HSA-6799198 PhaeoP54_02358 7b07d026a80290e0e302f5fc587bf46e 355 SUPERFAMILY SSF53335 5 353 1.11E-108 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PhaeoP54_04046 0aaa8e60f700d104469e0d87d2541118 554 Pfam PF00534 Glycosyl transferases group 1 351 469 2.4E-16 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 PhaeoP54_04046 0aaa8e60f700d104469e0d87d2541118 554 SUPERFAMILY SSF53756 168 522 2.16E-34 T 14-10-2018 PhaeoP54_04046 0aaa8e60f700d104469e0d87d2541118 554 Gene3D G3DSA:3.40.50.2000 177 328 1.0E-25 T 14-10-2018 PhaeoP54_04046 0aaa8e60f700d104469e0d87d2541118 554 Gene3D G3DSA:3.40.50.2000 329 503 1.0E-25 T 14-10-2018 PhaeoP54_02892 4152a8f74a88c089b9e0afdf45bb2070 267 SUPERFAMILY SSF51735 7 258 7.7E-63 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PhaeoP54_02892 4152a8f74a88c089b9e0afdf45bb2070 267 Gene3D G3DSA:3.40.50.720 1 263 2.6E-64 T 14-10-2018 PhaeoP54_02892 4152a8f74a88c089b9e0afdf45bb2070 267 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 163 182 7.2E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_02892 4152a8f74a88c089b9e0afdf45bb2070 267 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 7.2E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_02892 4152a8f74a88c089b9e0afdf45bb2070 267 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 143 151 7.2E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_02892 4152a8f74a88c089b9e0afdf45bb2070 267 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 256 1.9E-48 T 14-10-2018 PhaeoP54_02892 4152a8f74a88c089b9e0afdf45bb2070 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 4.7E-30 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_02892 4152a8f74a88c089b9e0afdf45bb2070 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 163 182 4.7E-30 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_02892 4152a8f74a88c089b9e0afdf45bb2070 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 4.7E-30 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_02892 4152a8f74a88c089b9e0afdf45bb2070 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 137 153 4.7E-30 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_02892 4152a8f74a88c089b9e0afdf45bb2070 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 184 201 4.7E-30 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_02892 4152a8f74a88c089b9e0afdf45bb2070 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 220 240 4.7E-30 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_00495 c66f33098a1f7b54a51402b72aeb1f7d 302 Gene3D G3DSA:3.30.420.310 90 302 1.1E-33 T 14-10-2018 PhaeoP54_00495 c66f33098a1f7b54a51402b72aeb1f7d 302 Pfam PF05035 2-keto-3-deoxy-galactonokinase 89 295 7.5E-28 T 14-10-2018 IPR007729 2-keto-3-deoxy-galactonokinase GO:0008671|GO:0034194 KEGG: 00052+2.7.1.58|MetaCyc: PWY-7130 PhaeoP54_02682 1fad03024945dcff4b18066cf16977b8 554 Gene3D G3DSA:3.90.700.10 265 373 1.2E-118 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 PhaeoP54_02682 1fad03024945dcff4b18066cf16977b8 554 Pfam PF00890 FAD binding domain 37 407 1.1E-72 T 14-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 PhaeoP54_02682 1fad03024945dcff4b18066cf16977b8 554 SUPERFAMILY SSF51905 36 438 1.27E-48 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PhaeoP54_02682 1fad03024945dcff4b18066cf16977b8 554 Gene3D G3DSA:1.20.58.100 446 542 6.2E-19 T 14-10-2018 PhaeoP54_02682 1fad03024945dcff4b18066cf16977b8 554 SUPERFAMILY SSF46977 455 542 2.22E-24 T 14-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 PhaeoP54_02682 1fad03024945dcff4b18066cf16977b8 554 Pfam PF02910 Fumarate reductase flavoprotein C-term 495 538 2.6E-9 T 14-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 PhaeoP54_02682 1fad03024945dcff4b18066cf16977b8 554 Gene3D G3DSA:3.50.50.60 37 419 1.2E-118 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PhaeoP54_02682 1fad03024945dcff4b18066cf16977b8 554 SUPERFAMILY SSF56425 255 367 6.28E-34 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 PhaeoP54_02347 c9a5a6d55cd1e83e7d8014576b9f10e8 165 SMART SM00347 43 140 7.6E-17 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PhaeoP54_02347 c9a5a6d55cd1e83e7d8014576b9f10e8 165 Gene3D G3DSA:1.10.10.10 7 154 9.8E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_02347 c9a5a6d55cd1e83e7d8014576b9f10e8 165 Pfam PF01047 MarR family 64 105 4.1E-12 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PhaeoP54_02347 c9a5a6d55cd1e83e7d8014576b9f10e8 165 PRINTS PR00598 Bacterial regulatory protein MarR family signature 101 117 1.5E-10 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PhaeoP54_02347 c9a5a6d55cd1e83e7d8014576b9f10e8 165 PRINTS PR00598 Bacterial regulatory protein MarR family signature 130 150 1.5E-10 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PhaeoP54_02347 c9a5a6d55cd1e83e7d8014576b9f10e8 165 PRINTS PR00598 Bacterial regulatory protein MarR family signature 82 97 1.5E-10 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PhaeoP54_02347 c9a5a6d55cd1e83e7d8014576b9f10e8 165 PRINTS PR00598 Bacterial regulatory protein MarR family signature 65 81 1.5E-10 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PhaeoP54_02347 c9a5a6d55cd1e83e7d8014576b9f10e8 165 SUPERFAMILY SSF46785 22 155 1.26E-25 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_01796 5493729095477bf30e91485e4c98f132 75 Pfam PF01084 Ribosomal protein S18 21 70 2.1E-25 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PhaeoP54_01796 5493729095477bf30e91485e4c98f132 75 TIGRFAM TIGR00165 S18: ribosomal protein bS18 6 74 1.7E-30 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PhaeoP54_01796 5493729095477bf30e91485e4c98f132 75 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 23 72 4.0E-21 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PhaeoP54_01796 5493729095477bf30e91485e4c98f132 75 Gene3D G3DSA:4.10.640.10 1 75 4.5E-28 T 14-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PhaeoP54_01796 5493729095477bf30e91485e4c98f132 75 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 4 75 21.75 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PhaeoP54_01796 5493729095477bf30e91485e4c98f132 75 PRINTS PR00974 Ribosomal protein S18 family signature 40 47 6.8E-19 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PhaeoP54_01796 5493729095477bf30e91485e4c98f132 75 PRINTS PR00974 Ribosomal protein S18 family signature 48 62 6.8E-19 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PhaeoP54_01796 5493729095477bf30e91485e4c98f132 75 PRINTS PR00974 Ribosomal protein S18 family signature 30 40 6.8E-19 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PhaeoP54_01796 5493729095477bf30e91485e4c98f132 75 PRINTS PR00974 Ribosomal protein S18 family signature 62 72 6.8E-19 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PhaeoP54_01796 5493729095477bf30e91485e4c98f132 75 ProSitePatterns PS00057 Ribosomal protein S18 signature. 23 46 - T 14-10-2018 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PhaeoP54_01796 5493729095477bf30e91485e4c98f132 75 SUPERFAMILY SSF46911 3 75 2.62E-28 T 14-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PhaeoP54_01147 0a796b6f3b663b0f0e127682f90bed86 237 Pfam PF03796 DnaB-like helicase C terminal domain 146 210 9.7E-7 T 14-10-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 PhaeoP54_01147 0a796b6f3b663b0f0e127682f90bed86 237 Pfam PF03796 DnaB-like helicase C terminal domain 56 110 9.1E-5 T 14-10-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 PhaeoP54_01147 0a796b6f3b663b0f0e127682f90bed86 237 SUPERFAMILY SSF52540 61 208 1.1E-17 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_01147 0a796b6f3b663b0f0e127682f90bed86 237 Gene3D G3DSA:3.40.50.300 56 212 6.7E-20 T 14-10-2018 PhaeoP54_03710 6fb88f83661e37cce26d089cb5024845 246 Gene3D G3DSA:3.40.50.1820 2 246 3.3E-53 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold PhaeoP54_03710 6fb88f83661e37cce26d089cb5024845 246 Pfam PF12697 Alpha/beta hydrolase family 16 238 2.3E-18 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 PhaeoP54_03710 6fb88f83661e37cce26d089cb5024845 246 PRINTS PR00111 Alpha/beta hydrolase fold signature 39 54 6.2E-8 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 PhaeoP54_03710 6fb88f83661e37cce26d089cb5024845 246 PRINTS PR00111 Alpha/beta hydrolase fold signature 80 93 6.2E-8 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 PhaeoP54_03710 6fb88f83661e37cce26d089cb5024845 246 PRINTS PR00111 Alpha/beta hydrolase fold signature 94 107 6.2E-8 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 PhaeoP54_03710 6fb88f83661e37cce26d089cb5024845 246 SUPERFAMILY SSF53474 6 245 3.95E-52 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold PhaeoP54_03391 6d67850d8c771d400a2f618a98155912 254 SUPERFAMILY SSF47781 45 113 3.71E-8 T 14-10-2018 IPR010994 RuvA domain 2-like PhaeoP54_03391 6d67850d8c771d400a2f618a98155912 254 Pfam PF04002 RadC-like JAB domain 134 252 5.8E-43 T 14-10-2018 IPR025657 RadC-like JAB domain PhaeoP54_03391 6d67850d8c771d400a2f618a98155912 254 Gene3D G3DSA:1.10.150.20 74 116 2.2E-5 T 14-10-2018 PhaeoP54_03391 6d67850d8c771d400a2f618a98155912 254 Gene3D G3DSA:3.40.140.10 130 254 3.2E-40 T 14-10-2018 PhaeoP54_03391 6d67850d8c771d400a2f618a98155912 254 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 203 208 - T 14-10-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site PhaeoP54_03391 6d67850d8c771d400a2f618a98155912 254 TIGRFAM TIGR00608 radc: DNA repair protein RadC 41 254 8.9E-76 T 14-10-2018 IPR001405 Uncharacterised protein family UPF0758 PhaeoP54_00135 fcb9cc80d576d00f013b1e3999e948c4 279 SUPERFAMILY SSF103481 185 276 3.66E-8 T 14-10-2018 PhaeoP54_00135 fcb9cc80d576d00f013b1e3999e948c4 279 SUPERFAMILY SSF103481 39 133 1.1E-11 T 14-10-2018 PhaeoP54_00135 fcb9cc80d576d00f013b1e3999e948c4 279 Gene3D G3DSA:1.10.3730.20 46 137 6.4E-6 T 14-10-2018 PhaeoP54_00135 fcb9cc80d576d00f013b1e3999e948c4 279 Pfam PF00892 EamA-like transporter family 144 276 1.7E-6 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 PhaeoP54_00308 75a8402aa55f3a7cd7329ccb6b92d6c9 59 Gene3D G3DSA:1.20.58.660 3 57 6.4E-8 T 14-10-2018 PhaeoP54_00308 75a8402aa55f3a7cd7329ccb6b92d6c9 59 Pfam PF04325 Protein of unknown function (DUF465) 8 52 1.1E-12 T 14-10-2018 IPR007420 Protein of unknown function DUF465 PhaeoP54_02019 c8efa565563c9a34f502916ca5dabd70 307 Gene3D G3DSA:3.90.79.10 159 292 4.8E-28 T 14-10-2018 PhaeoP54_02019 c8efa565563c9a34f502916ca5dabd70 307 SMART SM00903 13 156 8.8E-60 T 14-10-2018 IPR002563 Flavin reductase like domain GO:0010181 PhaeoP54_02019 c8efa565563c9a34f502916ca5dabd70 307 Pfam PF01613 Flavin reductase like domain 14 156 1.2E-37 T 14-10-2018 IPR002563 Flavin reductase like domain GO:0010181 PhaeoP54_02019 c8efa565563c9a34f502916ca5dabd70 307 Gene3D G3DSA:2.30.110.10 1 158 1.5E-52 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 PhaeoP54_02019 c8efa565563c9a34f502916ca5dabd70 307 SUPERFAMILY SSF50475 4 155 2.21E-49 T 14-10-2018 PhaeoP54_03425 d1c6f25558d8bf2217b03e499ea2069c 423 Gene3D G3DSA:3.40.50.12740 19 189 5.1E-45 T 14-10-2018 PhaeoP54_03425 d1c6f25558d8bf2217b03e499ea2069c 423 SUPERFAMILY SSF52172 20 172 1.18E-40 T 14-10-2018 IPR011006 CheY-like superfamily PhaeoP54_03425 d1c6f25558d8bf2217b03e499ea2069c 423 Pfam PF00072 Response regulator receiver domain 21 132 2.9E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PhaeoP54_03425 d1c6f25558d8bf2217b03e499ea2069c 423 Gene3D G3DSA:3.60.40.10 190 422 9.5E-46 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 PhaeoP54_03425 d1c6f25558d8bf2217b03e499ea2069c 423 SUPERFAMILY SSF81606 270 416 7.06E-5 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 PhaeoP54_03425 d1c6f25558d8bf2217b03e499ea2069c 423 SMART SM00448 19 132 1.8E-43 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PhaeoP54_03425 d1c6f25558d8bf2217b03e499ea2069c 423 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 216 417 6.8E-37 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 PhaeoP54_03425 d1c6f25558d8bf2217b03e499ea2069c 423 SMART SM00331 188 420 2.1E-14 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 PhaeoP54_03208 d2df9c4d61e57ec4fab45416ddc03b00 380 SUPERFAMILY SSF51735 1 174 1.2E-25 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PhaeoP54_03208 d2df9c4d61e57ec4fab45416ddc03b00 380 Gene3D G3DSA:3.40.50.720 1 121 1.6E-10 T 14-10-2018 PhaeoP54_03208 d2df9c4d61e57ec4fab45416ddc03b00 380 Pfam PF03435 Saccharopine dehydrogenase NADP binding domain 21 112 4.6E-10 T 14-10-2018 IPR005097 Saccharopine dehydrogenase, NADP binding domain GO:0016491|GO:0055114 PhaeoP54_03208 d2df9c4d61e57ec4fab45416ddc03b00 380 SUPERFAMILY SSF55347 118 324 8.5E-42 T 14-10-2018 PhaeoP54_03208 d2df9c4d61e57ec4fab45416ddc03b00 380 Gene3D G3DSA:3.30.360.10 122 290 4.8E-38 T 14-10-2018 PhaeoP54_03208 d2df9c4d61e57ec4fab45416ddc03b00 380 Pfam PF16653 Saccharopine dehydrogenase C-terminal domain 117 364 8.2E-40 T 14-10-2018 IPR032095 Saccharopine dehydrogenase, C-terminal Reactome: R-HSA-71064 PhaeoP54_00087 0a4e723e4ecb233f4721f362627852d5 199 PIRSF PIRSF029557 10 198 2.6E-76 T 14-10-2018 IPR010707 Protein of unknown function DUF1285 PhaeoP54_00087 0a4e723e4ecb233f4721f362627852d5 199 Gene3D G3DSA:3.10.540.10 9 98 8.2E-35 T 14-10-2018 PhaeoP54_00087 0a4e723e4ecb233f4721f362627852d5 199 Pfam PF06938 Protein of unknown function (DUF1285) 48 188 9.8E-56 T 14-10-2018 IPR010707 Protein of unknown function DUF1285 PhaeoP54_00087 0a4e723e4ecb233f4721f362627852d5 199 Gene3D G3DSA:2.20.70.10 170 197 9.2E-6 T 14-10-2018 PhaeoP54_00087 0a4e723e4ecb233f4721f362627852d5 199 Gene3D G3DSA:2.30.270.10 99 168 2.9E-29 T 14-10-2018 IPR023361 DUF1285, beta-roll domain superfamily PhaeoP54_01625 87fa7f33a3c46957a129f948d0105a0c 232 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 8 183 1.1E-49 T 14-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 PhaeoP54_01625 87fa7f33a3c46957a129f948d0105a0c 232 Pfam PF00849 RNA pseudouridylate synthase 4 153 2.6E-13 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 PhaeoP54_01625 87fa7f33a3c46957a129f948d0105a0c 232 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 43 57 - T 14-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 PhaeoP54_01625 87fa7f33a3c46957a129f948d0105a0c 232 Gene3D G3DSA:3.30.70.1560 72 172 1.3E-40 T 14-10-2018 PhaeoP54_01625 87fa7f33a3c46957a129f948d0105a0c 232 Gene3D G3DSA:3.30.70.580 1 71 1.0E-20 T 14-10-2018 PhaeoP54_01625 87fa7f33a3c46957a129f948d0105a0c 232 SUPERFAMILY SSF55120 4 187 1.41E-40 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 PhaeoP54_00440 c7eae713b4b915190fe7ec2c1cff3b86 302 Pfam PF03466 LysR substrate binding domain 92 292 1.2E-26 T 14-10-2018 IPR005119 LysR, substrate-binding PhaeoP54_00440 c7eae713b4b915190fe7ec2c1cff3b86 302 Gene3D G3DSA:3.40.190.10 94 277 4.7E-35 T 14-10-2018 PhaeoP54_00440 c7eae713b4b915190fe7ec2c1cff3b86 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 66 5.5E-18 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PhaeoP54_00440 c7eae713b4b915190fe7ec2c1cff3b86 302 Gene3D G3DSA:3.40.190.10 163 268 4.7E-35 T 14-10-2018 PhaeoP54_00440 c7eae713b4b915190fe7ec2c1cff3b86 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 7.5E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PhaeoP54_00440 c7eae713b4b915190fe7ec2c1cff3b86 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 7.5E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PhaeoP54_00440 c7eae713b4b915190fe7ec2c1cff3b86 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 7.5E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PhaeoP54_00440 c7eae713b4b915190fe7ec2c1cff3b86 302 SUPERFAMILY SSF53850 93 296 4.25E-28 T 14-10-2018 PhaeoP54_00440 c7eae713b4b915190fe7ec2c1cff3b86 302 SUPERFAMILY SSF46785 3 113 2.72E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_00440 c7eae713b4b915190fe7ec2c1cff3b86 302 Gene3D G3DSA:1.10.10.10 3 86 2.0E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_03165 8b1c40c2d594731d8cb35b989ed9e5a7 324 SUPERFAMILY SSF52768 6 316 3.96E-92 T 14-10-2018 IPR023696 Ureohydrolase domain superfamily PhaeoP54_03165 8b1c40c2d594731d8cb35b989ed9e5a7 324 PIRSF PIRSF036979 17 320 4.6E-88 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 PhaeoP54_03165 8b1c40c2d594731d8cb35b989ed9e5a7 324 Gene3D G3DSA:3.40.800.10 6 323 1.6E-106 T 14-10-2018 PhaeoP54_03165 8b1c40c2d594731d8cb35b989ed9e5a7 324 ProSitePatterns PS01053 Arginase family signature. 245 266 - T 14-10-2018 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 PhaeoP54_03165 8b1c40c2d594731d8cb35b989ed9e5a7 324 TIGRFAM TIGR01230 agmatinase: agmatinase 35 315 8.7E-54 T 14-10-2018 IPR005925 Agmatinase-related KEGG: 00330+3.5.3.11|MetaCyc: PWY-40|MetaCyc: PWY-6305|Reactome: R-HSA-351143 PhaeoP54_03165 8b1c40c2d594731d8cb35b989ed9e5a7 324 PRINTS PR00116 Arginase signature 129 144 5.5E-10 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 PhaeoP54_03165 8b1c40c2d594731d8cb35b989ed9e5a7 324 PRINTS PR00116 Arginase signature 242 271 5.5E-10 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 PhaeoP54_03165 8b1c40c2d594731d8cb35b989ed9e5a7 324 Pfam PF00491 Arginase family 44 314 5.4E-81 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 PhaeoP54_03913 8f3c9381e1ad77f192c8e085bf53c257 400 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 344 386 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 PhaeoP54_03913 8f3c9381e1ad77f192c8e085bf53c257 400 SMART SM00342 307 390 1.0E-16 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PhaeoP54_03913 8f3c9381e1ad77f192c8e085bf53c257 400 Pfam PF12833 Helix-turn-helix domain 313 391 3.6E-15 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PhaeoP54_03913 8f3c9381e1ad77f192c8e085bf53c257 400 SUPERFAMILY SSF46689 343 392 7.62E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PhaeoP54_03913 8f3c9381e1ad77f192c8e085bf53c257 400 Gene3D G3DSA:1.10.10.60 289 339 1.7E-6 T 14-10-2018 PhaeoP54_03913 8f3c9381e1ad77f192c8e085bf53c257 400 Gene3D G3DSA:1.10.10.60 340 394 9.0E-16 T 14-10-2018 PhaeoP54_03900 65b39d95728b67bd4a94dfb90cdc5d3a 293 ProSitePatterns PS00397 Site-specific recombinases active site. 6 14 - T 14-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 PhaeoP54_03900 65b39d95728b67bd4a94dfb90cdc5d3a 293 ProSitePatterns PS00398 Site-specific recombinases signature 2. 56 68 - T 14-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 PhaeoP54_03900 65b39d95728b67bd4a94dfb90cdc5d3a 293 SMART SM00857 3 137 3.3E-52 T 14-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 PhaeoP54_03900 65b39d95728b67bd4a94dfb90cdc5d3a 293 Pfam PF00239 Resolvase, N terminal domain 4 136 7.2E-41 T 14-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 PhaeoP54_03900 65b39d95728b67bd4a94dfb90cdc5d3a 293 SUPERFAMILY SSF53041 1 136 2.88E-39 T 14-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 PhaeoP54_03900 65b39d95728b67bd4a94dfb90cdc5d3a 293 Gene3D G3DSA:3.40.50.1390 3 126 1.2E-43 T 14-10-2018 PhaeoP54_02542 7819fbd7473e3b4ae4c4e0c166c7c4fc 441 Gene3D G3DSA:1.10.10.350 359 439 1.6E-11 T 14-10-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 PhaeoP54_02542 7819fbd7473e3b4ae4c4e0c166c7c4fc 441 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 3 435 9.7E-101 T 14-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 PhaeoP54_02542 7819fbd7473e3b4ae4c4e0c166c7c4fc 441 Gene3D G3DSA:3.40.50.620 1 315 1.6E-104 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PhaeoP54_02542 7819fbd7473e3b4ae4c4e0c166c7c4fc 441 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 3 305 1.6E-74 T 14-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 PhaeoP54_02542 7819fbd7473e3b4ae4c4e0c166c7c4fc 441 SUPERFAMILY SSF48163 301 434 8.76E-26 T 14-10-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 PhaeoP54_02542 7819fbd7473e3b4ae4c4e0c166c7c4fc 441 PRINTS PR00987 Glutamyl-tRNA synthetase signature 181 191 5.7E-23 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 PhaeoP54_02542 7819fbd7473e3b4ae4c4e0c166c7c4fc 441 PRINTS PR00987 Glutamyl-tRNA synthetase signature 197 205 5.7E-23 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 PhaeoP54_02542 7819fbd7473e3b4ae4c4e0c166c7c4fc 441 PRINTS PR00987 Glutamyl-tRNA synthetase signature 34 47 5.7E-23 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 PhaeoP54_02542 7819fbd7473e3b4ae4c4e0c166c7c4fc 441 PRINTS PR00987 Glutamyl-tRNA synthetase signature 19 30 5.7E-23 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 PhaeoP54_02542 7819fbd7473e3b4ae4c4e0c166c7c4fc 441 PRINTS PR00987 Glutamyl-tRNA synthetase signature 5 17 5.7E-23 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 PhaeoP54_02542 7819fbd7473e3b4ae4c4e0c166c7c4fc 441 Hamap MF_00022 Glutamate--tRNA ligase [gltX]. 1 441 24.691 T 14-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 PhaeoP54_02542 7819fbd7473e3b4ae4c4e0c166c7c4fc 441 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 8 19 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 PhaeoP54_02542 7819fbd7473e3b4ae4c4e0c166c7c4fc 441 SUPERFAMILY SSF52374 3 299 1.93E-93 T 14-10-2018 PhaeoP54_01409 31918d6a7a6359ac65bfe7df3ec06ebd 216 Gene3D G3DSA:3.30.910.20 52 216 3.9E-21 T 14-10-2018 IPR024930 Skp domain superfamily PhaeoP54_01409 31918d6a7a6359ac65bfe7df3ec06ebd 216 Pfam PF03938 Outer membrane protein (OmpH-like) 40 198 1.4E-16 T 14-10-2018 IPR005632 Chaperone protein Skp GO:0051082 PhaeoP54_01409 31918d6a7a6359ac65bfe7df3ec06ebd 216 SMART SM00935 27 200 5.3E-24 T 14-10-2018 IPR005632 Chaperone protein Skp GO:0051082 PhaeoP54_01409 31918d6a7a6359ac65bfe7df3ec06ebd 216 SUPERFAMILY SSF111384 59 200 5.49E-19 T 14-10-2018 PhaeoP54_03952 64a580939cea1d42cb8c1c3738afc9f5 405 Gene3D G3DSA:1.20.1250.20 5 198 1.2E-16 T 14-10-2018 PhaeoP54_03952 64a580939cea1d42cb8c1c3738afc9f5 405 SUPERFAMILY SSF103473 8 403 4.84E-44 T 14-10-2018 IPR036259 MFS transporter superfamily PhaeoP54_03952 64a580939cea1d42cb8c1c3738afc9f5 405 Pfam PF05977 Transmembrane secretion effector 7 403 4.9E-33 T 14-10-2018 IPR010290 Transmembrane secretion effector PhaeoP54_03952 64a580939cea1d42cb8c1c3738afc9f5 405 Gene3D G3DSA:1.20.1250.20 211 404 2.7E-15 T 14-10-2018 PhaeoP54_01880 c85c3faad55e6f6cae350c3dab539c0f 491 PRINTS PR00481 Cytosol aminopeptidase signature 331 351 6.7E-49 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 PhaeoP54_01880 c85c3faad55e6f6cae350c3dab539c0f 491 PRINTS PR00481 Cytosol aminopeptidase signature 360 375 6.7E-49 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 PhaeoP54_01880 c85c3faad55e6f6cae350c3dab539c0f 491 PRINTS PR00481 Cytosol aminopeptidase signature 309 330 6.7E-49 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 PhaeoP54_01880 c85c3faad55e6f6cae350c3dab539c0f 491 PRINTS PR00481 Cytosol aminopeptidase signature 250 267 6.7E-49 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 PhaeoP54_01880 c85c3faad55e6f6cae350c3dab539c0f 491 PRINTS PR00481 Cytosol aminopeptidase signature 272 293 6.7E-49 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 PhaeoP54_01880 c85c3faad55e6f6cae350c3dab539c0f 491 SUPERFAMILY SSF52949 23 173 1.65E-8 T 14-10-2018 PhaeoP54_01880 c85c3faad55e6f6cae350c3dab539c0f 491 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 335 342 - T 14-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 PhaeoP54_01880 c85c3faad55e6f6cae350c3dab539c0f 491 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 9 489 32.794 T 14-10-2018 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 PhaeoP54_01880 c85c3faad55e6f6cae350c3dab539c0f 491 SUPERFAMILY SSF53187 170 487 9.21E-113 T 14-10-2018 PhaeoP54_01880 c85c3faad55e6f6cae350c3dab539c0f 491 Gene3D G3DSA:3.40.630.10 157 490 8.0E-127 T 14-10-2018 PhaeoP54_01880 c85c3faad55e6f6cae350c3dab539c0f 491 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 175 480 5.6E-120 T 14-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 PhaeoP54_01880 c85c3faad55e6f6cae350c3dab539c0f 491 Gene3D G3DSA:3.40.220.10 17 151 2.1E-7 T 14-10-2018 PhaeoP54_01880 c85c3faad55e6f6cae350c3dab539c0f 491 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 25 139 4.7E-6 T 14-10-2018 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 PhaeoP54_03096 a27d14b27b391658be9192a0c06aa8ba 117 Gene3D G3DSA:3.90.940.10 1 114 9.9E-22 T 14-10-2018 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 PhaeoP54_03096 a27d14b27b391658be9192a0c06aa8ba 117 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 1 55 1.4E-17 T 14-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PhaeoP54_03096 a27d14b27b391658be9192a0c06aa8ba 117 SUPERFAMILY SSF63562 1 80 1.7E-19 T 14-10-2018 IPR036161 RPB6/omega subunit-like superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 PhaeoP54_03096 a27d14b27b391658be9192a0c06aa8ba 117 Pfam PF01192 RNA polymerase Rpb6 8 56 1.0E-12 T 14-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 PhaeoP54_03096 a27d14b27b391658be9192a0c06aa8ba 117 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 1 61 15.32 T 14-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PhaeoP54_03096 a27d14b27b391658be9192a0c06aa8ba 117 SMART SM01409 8 60 1.4E-11 T 14-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 PhaeoP54_01377 325382fe23e67d6cd2dcf5c8e406c718 243 Gene3D G3DSA:2.40.30.130 1 92 7.8E-14 T 14-10-2018 PhaeoP54_01377 325382fe23e67d6cd2dcf5c8e406c718 243 SMART SM00863 191 238 1.7E-16 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 PhaeoP54_01377 325382fe23e67d6cd2dcf5c8e406c718 243 SUPERFAMILY SSF50447 1 92 6.36E-14 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily PhaeoP54_01377 325382fe23e67d6cd2dcf5c8e406c718 243 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 191 238 2.5E-13 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 PhaeoP54_01377 325382fe23e67d6cd2dcf5c8e406c718 243 Gene3D G3DSA:3.30.980.10 95 243 3.4E-32 T 14-10-2018 PhaeoP54_01377 325382fe23e67d6cd2dcf5c8e406c718 243 Pfam PF01411 tRNA synthetases class II (A) 18 98 2.1E-8 T 14-10-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 PhaeoP54_01377 325382fe23e67d6cd2dcf5c8e406c718 243 SUPERFAMILY SSF55186 98 241 3.66E-30 T 14-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 PhaeoP54_03451 4207cd57c2435d64c90534d5d3c30129 231 Hamap MF_00528 Septum formation protein Maf [maf]. 36 230 25.145 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 PhaeoP54_03451 4207cd57c2435d64c90534d5d3c30129 231 Pfam PF02545 Maf-like protein 36 223 2.4E-38 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 PhaeoP54_03451 4207cd57c2435d64c90534d5d3c30129 231 TIGRFAM TIGR00172 maf: septum formation protein Maf 33 223 1.3E-35 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 PhaeoP54_03451 4207cd57c2435d64c90534d5d3c30129 231 SUPERFAMILY SSF52972 34 223 3.2E-49 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like PhaeoP54_03451 4207cd57c2435d64c90534d5d3c30129 231 Gene3D G3DSA:3.90.950.10 33 228 5.2E-49 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like PhaeoP54_03451 4207cd57c2435d64c90534d5d3c30129 231 PIRSF PIRSF006305 29 229 1.2E-38 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 PhaeoP54_02382 e2f1a107238bb22defdf89c05f356759 297 SUPERFAMILY SSF56784 20 274 1.44E-43 T 14-10-2018 IPR036412 HAD-like superfamily PhaeoP54_02382 e2f1a107238bb22defdf89c05f356759 297 Gene3D G3DSA:3.40.50.1000 101 207 3.0E-42 T 14-10-2018 IPR023214 HAD superfamily PhaeoP54_02382 e2f1a107238bb22defdf89c05f356759 297 Pfam PF13344 Haloacid dehalogenase-like hydrolase 25 111 8.3E-12 T 14-10-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA PhaeoP54_02382 e2f1a107238bb22defdf89c05f356759 297 TIGRFAM TIGR01459 HAD-SF-IIA-hyp4: HAD hydrolase, TIGR01459 family 15 259 4.9E-39 T 14-10-2018 IPR006356 HAD-superfamily hydrolase, subfamily IIA, hypothetical 3 PhaeoP54_02382 e2f1a107238bb22defdf89c05f356759 297 Pfam PF13242 HAD-hyrolase-like 207 275 5.8E-12 T 14-10-2018 PhaeoP54_02382 e2f1a107238bb22defdf89c05f356759 297 Gene3D G3DSA:3.40.50.1000 23 262 3.0E-42 T 14-10-2018 IPR023214 HAD superfamily PhaeoP54_02289 add0e550242cb5d17781e8598fd6d400 95 Pfam PF08085 Entericidin EcnA/B family 68 88 2.7E-8 T 14-10-2018 IPR012556 Entericidin A/B GO:0009636|GO:0016020 PhaeoP54_03090 1a4efe92015d065a928503130f3cd74c 228 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 10 223 3.0E-68 T 14-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 PhaeoP54_03090 1a4efe92015d065a928503130f3cd74c 228 ProSitePatterns PS00517 Ribonuclease III family signature. 42 50 - T 14-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 PhaeoP54_03090 1a4efe92015d065a928503130f3cd74c 228 SMART SM00535 22 153 8.6E-46 T 14-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 PhaeoP54_03090 1a4efe92015d065a928503130f3cd74c 228 Gene3D G3DSA:1.10.1520.10 6 150 2.0E-36 T 14-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 PhaeoP54_03090 1a4efe92015d065a928503130f3cd74c 228 Gene3D G3DSA:3.30.160.20 156 227 8.1E-20 T 14-10-2018 PhaeoP54_03090 1a4efe92015d065a928503130f3cd74c 228 Pfam PF00035 Double-stranded RNA binding motif 158 221 8.1E-13 T 14-10-2018 IPR014720 Double-stranded RNA-binding domain PhaeoP54_03090 1a4efe92015d065a928503130f3cd74c 228 Hamap MF_00104 Ribonuclease 3 [rnc]. 10 221 26.075 T 14-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 PhaeoP54_03090 1a4efe92015d065a928503130f3cd74c 228 SUPERFAMILY SSF54768 115 224 2.2E-24 T 14-10-2018 PhaeoP54_03090 1a4efe92015d065a928503130f3cd74c 228 SMART SM00358 158 225 5.2E-22 T 14-10-2018 IPR014720 Double-stranded RNA-binding domain PhaeoP54_03090 1a4efe92015d065a928503130f3cd74c 228 Pfam PF14622 Ribonuclease-III-like 22 142 1.8E-30 T 14-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 PhaeoP54_03090 1a4efe92015d065a928503130f3cd74c 228 SUPERFAMILY SSF69065 4 160 7.98E-42 T 14-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 PhaeoP54_03911 f034cce18eb83aa65972732c8896a869 468 Gene3D G3DSA:2.40.30.170 157 381 8.8E-49 T 14-10-2018 PhaeoP54_03911 f034cce18eb83aa65972732c8896a869 468 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 155 451 1.1E-42 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 PhaeoP54_03911 f034cce18eb83aa65972732c8896a869 468 Gene3D G3DSA:2.40.50.100 168 296 8.8E-49 T 14-10-2018 PhaeoP54_03911 f034cce18eb83aa65972732c8896a869 468 SUPERFAMILY SSF111369 160 360 4.71E-32 T 14-10-2018 PhaeoP54_03911 f034cce18eb83aa65972732c8896a869 468 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 168 358 7.3E-20 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain PhaeoP54_03911 f034cce18eb83aa65972732c8896a869 468 Gene3D G3DSA:1.10.287.470 203 262 8.8E-49 T 14-10-2018 PhaeoP54_03911 f034cce18eb83aa65972732c8896a869 468 Gene3D G3DSA:2.40.420.20 382 448 8.8E-49 T 14-10-2018 PhaeoP54_00530 0bf4e0c76f17edb1b692e08a9f8b1b63 412 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 252 402 1.2E-34 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PhaeoP54_00530 0bf4e0c76f17edb1b692e08a9f8b1b63 412 Gene3D G3DSA:2.40.110.10 137 252 4.7E-47 T 14-10-2018 PhaeoP54_00530 0bf4e0c76f17edb1b692e08a9f8b1b63 412 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 138 235 6.1E-21 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 PhaeoP54_00530 0bf4e0c76f17edb1b692e08a9f8b1b63 412 Gene3D G3DSA:1.10.540.10 1 136 1.6E-43 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 PhaeoP54_00530 0bf4e0c76f17edb1b692e08a9f8b1b63 412 SUPERFAMILY SSF47203 250 406 1.45E-45 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 PhaeoP54_00530 0bf4e0c76f17edb1b692e08a9f8b1b63 412 SUPERFAMILY SSF56645 3 265 2.49E-63 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 PhaeoP54_00530 0bf4e0c76f17edb1b692e08a9f8b1b63 412 Gene3D G3DSA:1.20.140.10 253 409 1.4E-37 T 14-10-2018 PhaeoP54_00530 0bf4e0c76f17edb1b692e08a9f8b1b63 412 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 10 134 3.5E-14 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 PhaeoP54_01926 9103c0b78b83288e05af92df991ba40b 127 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 4 122 3.7E-15 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain PhaeoP54_01926 9103c0b78b83288e05af92df991ba40b 127 Gene3D G3DSA:3.10.180.10 1 127 2.1E-31 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PhaeoP54_01926 9103c0b78b83288e05af92df991ba40b 127 SUPERFAMILY SSF54593 2 125 1.1E-24 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PhaeoP54_00226 c69be3ddbcbbda46df5a3e3f65c11839 241 Gene3D G3DSA:2.60.130.10 2 237 2.7E-92 T 14-10-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 PhaeoP54_00226 c69be3ddbcbbda46df5a3e3f65c11839 241 Pfam PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal 7 40 2.7E-14 T 14-10-2018 IPR024756 Protocatechuate 3,4-dioxygenase beta subunit, N-terminal KEGG: 00362+1.13.11.3|KEGG: 00624+1.13.11.3|MetaCyc: PWY-6041 PhaeoP54_00226 c69be3ddbcbbda46df5a3e3f65c11839 241 TIGRFAM TIGR02422 protocat_beta: protocatechuate 3,4-dioxygenase, beta subunit 14 236 1.3E-107 T 14-10-2018 IPR012785 Protocatechuate 3,4-dioxygenase, beta subunit GO:0005506|GO:0018578|GO:0019619|GO:0055114 KEGG: 00362+1.13.11.3|KEGG: 00624+1.13.11.3|MetaCyc: PWY-6041 PhaeoP54_00226 c69be3ddbcbbda46df5a3e3f65c11839 241 SUPERFAMILY SSF49482 5 238 2.62E-79 T 14-10-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 PhaeoP54_00226 c69be3ddbcbbda46df5a3e3f65c11839 241 Pfam PF00775 Dioxygenase 44 228 1.1E-54 T 14-10-2018 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 PhaeoP54_00134 4715ee089672d99e6d43fcd2e03eb051 558 Pfam PF02690 Na+/Pi-cotransporter 143 263 1.6E-9 T 14-10-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 PhaeoP54_00134 4715ee089672d99e6d43fcd2e03eb051 558 Pfam PF02690 Na+/Pi-cotransporter 16 150 4.0E-25 T 14-10-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 PhaeoP54_00134 4715ee089672d99e6d43fcd2e03eb051 558 Gene3D G3DSA:1.20.58.220 332 543 1.0E-9 T 14-10-2018 IPR038078 PhoU-like domain superfamily PhaeoP54_00134 4715ee089672d99e6d43fcd2e03eb051 558 SUPERFAMILY SSF109755 330 538 2.72E-24 T 14-10-2018 PhaeoP54_03519 1f4768537b4d33858ecdfb69a1661535 98 Pfam PF02049 Flagellar hook-basal body complex protein FliE 26 98 1.4E-17 T 14-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 PhaeoP54_03519 1f4768537b4d33858ecdfb69a1661535 98 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 1 98 12.28 T 14-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 PhaeoP54_03290 016a72bc414ea74878301d2ab56bcffd 175 PIRSF PIRSF032064 1 169 5.1E-30 T 14-10-2018 IPR010593 Protein of unknown function DUF1159 PhaeoP54_03290 016a72bc414ea74878301d2ab56bcffd 175 Pfam PF05258 Protein of unknown function (DUF721) 14 105 1.5E-16 T 14-10-2018 IPR007922 Protein of unknown function DUF721/UPF0232 PhaeoP54_00690 1f17c4e7aa930daefd5c45770bde56e5 367 SUPERFAMILY SSF55347 136 297 1.26E-29 T 14-10-2018 PhaeoP54_00690 1f17c4e7aa930daefd5c45770bde56e5 367 SUPERFAMILY SSF51735 4 158 2.29E-40 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PhaeoP54_00690 1f17c4e7aa930daefd5c45770bde56e5 367 Gene3D G3DSA:3.30.360.10 132 364 2.7E-59 T 14-10-2018 PhaeoP54_00690 1f17c4e7aa930daefd5c45770bde56e5 367 Gene3D G3DSA:3.40.50.720 1 131 4.4E-32 T 14-10-2018 PhaeoP54_00690 1f17c4e7aa930daefd5c45770bde56e5 367 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 5 130 1.6E-22 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 PhaeoP54_00690 1f17c4e7aa930daefd5c45770bde56e5 367 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 142 258 5.7E-8 T 14-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 PhaeoP54_00317 91ddd9b19a70329fe96c1bff05cc7cd2 195 Pfam PF00578 AhpC/TSA family 60 167 7.4E-17 T 14-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 PhaeoP54_00317 91ddd9b19a70329fe96c1bff05cc7cd2 195 Gene3D G3DSA:3.40.30.10 22 194 7.1E-39 T 14-10-2018 PhaeoP54_00317 91ddd9b19a70329fe96c1bff05cc7cd2 195 SUPERFAMILY SSF52833 15 191 3.64E-33 T 14-10-2018 IPR036249 Thioredoxin-like superfamily PhaeoP54_00317 91ddd9b19a70329fe96c1bff05cc7cd2 195 ProSitePatterns PS00194 Thioredoxin family active site. 81 99 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 PhaeoP54_01446 6a8b16e7c331930c29b10a7397836f1c 300 SUPERFAMILY SSF103481 45 146 1.2E-15 T 14-10-2018 PhaeoP54_01446 6a8b16e7c331930c29b10a7397836f1c 300 SUPERFAMILY SSF103481 204 284 6.15E-8 T 14-10-2018 PhaeoP54_01446 6a8b16e7c331930c29b10a7397836f1c 300 Pfam PF00892 EamA-like transporter family 151 280 5.8E-9 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 PhaeoP54_01446 6a8b16e7c331930c29b10a7397836f1c 300 Pfam PF00892 EamA-like transporter family 11 142 4.0E-14 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 PhaeoP54_02947 79a558ac7f32fc1485b6f4b245479c84 278 SUPERFAMILY SSF46689 7 54 4.39E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PhaeoP54_02947 79a558ac7f32fc1485b6f4b245479c84 278 SUPERFAMILY SSF46689 59 111 2.37E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PhaeoP54_02947 79a558ac7f32fc1485b6f4b245479c84 278 Pfam PF12833 Helix-turn-helix domain 29 107 4.2E-17 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PhaeoP54_02947 79a558ac7f32fc1485b6f4b245479c84 278 SMART SM00342 23 106 1.1E-21 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PhaeoP54_02947 79a558ac7f32fc1485b6f4b245479c84 278 Gene3D G3DSA:3.20.80.10 128 278 2.2E-43 T 14-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily PhaeoP54_02947 79a558ac7f32fc1485b6f4b245479c84 278 Gene3D G3DSA:1.10.10.60 4 110 1.4E-22 T 14-10-2018 PhaeoP54_02947 79a558ac7f32fc1485b6f4b245479c84 278 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 60 102 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 PhaeoP54_02947 79a558ac7f32fc1485b6f4b245479c84 278 Pfam PF06445 GyrI-like small molecule binding domain 130 278 7.7E-38 T 14-10-2018 IPR029442 GyrI-like small molecule binding domain PhaeoP54_02947 79a558ac7f32fc1485b6f4b245479c84 278 SMART SM00871 126 278 1.1E-43 T 14-10-2018 IPR010499 Bacterial transcription activator, effector binding PhaeoP54_02947 79a558ac7f32fc1485b6f4b245479c84 278 SUPERFAMILY SSF55136 130 278 2.09E-39 T 14-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily PhaeoP54_03494 39af1e290e5f2290dfbd754dbac3d8be 278 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 13 66 3.4E-19 T 14-10-2018 IPR025713 Motility protein B, N-terminal domain PhaeoP54_03494 39af1e290e5f2290dfbd754dbac3d8be 278 SUPERFAMILY SSF103088 171 275 7.32E-8 T 14-10-2018 IPR036737 OmpA-like domain superfamily PhaeoP54_03494 39af1e290e5f2290dfbd754dbac3d8be 278 Gene3D G3DSA:3.30.1330.60 113 278 4.1E-26 T 14-10-2018 IPR036737 OmpA-like domain superfamily PhaeoP54_03417 dc7efbe9dab0772252eb1e1ed6e6810f 272 Pfam PF00520 Ion transport protein 25 239 3.6E-37 T 14-10-2018 IPR005821 Ion transport domain GO:0005216|GO:0006811|GO:0016020|GO:0055085 PhaeoP54_03417 dc7efbe9dab0772252eb1e1ed6e6810f 272 SUPERFAMILY SSF81324 25 234 8.63E-32 T 14-10-2018 PhaeoP54_03417 dc7efbe9dab0772252eb1e1ed6e6810f 272 Gene3D G3DSA:1.20.120.350 13 125 2.8E-26 T 14-10-2018 IPR027359 Voltage-dependent channel domain superfamily PhaeoP54_03417 dc7efbe9dab0772252eb1e1ed6e6810f 272 Gene3D G3DSA:1.10.287.70 136 232 4.2E-32 T 14-10-2018 PhaeoP54_02914 64e8a73133652ab106404ade824fb02f 277 ProSitePatterns PS00857 Prephenate dehydratase signature 1. 155 177 - T 14-10-2018 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 PhaeoP54_02914 64e8a73133652ab106404ade824fb02f 277 SUPERFAMILY SSF55021 174 272 2.04E-23 T 14-10-2018 PhaeoP54_02914 64e8a73133652ab106404ade824fb02f 277 Pfam PF00800 Prephenate dehydratase 5 181 3.7E-50 T 14-10-2018 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 PhaeoP54_02914 64e8a73133652ab106404ade824fb02f 277 Gene3D G3DSA:3.30.70.260 188 274 3.7E-20 T 14-10-2018 PhaeoP54_02914 64e8a73133652ab106404ade824fb02f 277 SUPERFAMILY SSF53850 4 184 1.95E-54 T 14-10-2018 PhaeoP54_02914 64e8a73133652ab106404ade824fb02f 277 Gene3D G3DSA:3.40.190.10 1 87 5.8E-25 T 14-10-2018 PhaeoP54_02914 64e8a73133652ab106404ade824fb02f 277 Gene3D G3DSA:3.40.190.10 88 167 2.1E-22 T 14-10-2018 PhaeoP54_01074 7525a96a04eb6989e17d02a588c170be 478 Gene3D G3DSA:1.25.40.10 321 468 7.4E-6 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 PhaeoP54_01074 7525a96a04eb6989e17d02a588c170be 478 Pfam PF11150 Protein of unknown function (DUF2927) 77 280 4.0E-53 T 14-10-2018 IPR021323 Protein of unknown function DUF2927 PhaeoP54_01397 be3e68285a6428fc1384ae3fc143308b 350 SUPERFAMILY SSF161098 126 335 3.53E-15 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_01397 be3e68285a6428fc1384ae3fc143308b 350 Gene3D G3DSA:1.10.3720.10 120 339 3.9E-20 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_01397 be3e68285a6428fc1384ae3fc143308b 350 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 150 348 3.0E-31 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PhaeoP54_02038 74b9173542a7d3f34b2184bfa30c75b7 200 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 145 162 7.3E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_02038 74b9173542a7d3f34b2184bfa30c75b7 200 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 144 7.3E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_02038 74b9173542a7d3f34b2184bfa30c75b7 200 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 2 19 7.3E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_02038 74b9173542a7d3f34b2184bfa30c75b7 200 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 54 65 7.3E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_02038 74b9173542a7d3f34b2184bfa30c75b7 200 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 29 179 9.8E-17 T 14-10-2018 PhaeoP54_02038 74b9173542a7d3f34b2184bfa30c75b7 200 SUPERFAMILY SSF51735 1 190 1.41E-26 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PhaeoP54_02038 74b9173542a7d3f34b2184bfa30c75b7 200 Gene3D G3DSA:3.40.50.720 1 196 2.9E-39 T 14-10-2018 PhaeoP54_03188 e1b57bb294a0b98fad967984fc94248e 41 Pfam PF00444 Ribosomal protein L36 1 41 5.0E-16 T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PhaeoP54_03188 e1b57bb294a0b98fad967984fc94248e 41 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 41 1.7E-7 T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PhaeoP54_03188 e1b57bb294a0b98fad967984fc94248e 41 SUPERFAMILY SSF57840 1 41 4.32E-12 T 14-10-2018 IPR035977 Ribosomal protein L36 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PhaeoP54_03188 e1b57bb294a0b98fad967984fc94248e 41 ProSitePatterns PS00828 Ribosomal protein L36 signature. 14 40 - T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PhaeoP54_03188 e1b57bb294a0b98fad967984fc94248e 41 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 41 16.662 T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PhaeoP54_01044 5a079951f8cac3d990084e29a641b1f9 322 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 9 276 15.528 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 PhaeoP54_01044 5a079951f8cac3d990084e29a641b1f9 322 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 13 40 7.6E-28 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 PhaeoP54_01044 5a079951f8cac3d990084e29a641b1f9 322 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 112 138 7.6E-28 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 PhaeoP54_01044 5a079951f8cac3d990084e29a641b1f9 322 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 94 112 7.6E-28 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 PhaeoP54_01044 5a079951f8cac3d990084e29a641b1f9 322 Pfam PF00902 Sec-independent protein translocase protein (TatC) 16 256 2.8E-61 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 PhaeoP54_03754 4d7435b5fba923d71367d7eff802656f 806 Gene3D G3DSA:2.40.30.110 715 792 8.8E-17 T 14-10-2018 PhaeoP54_03754 4d7435b5fba923d71367d7eff802656f 806 Gene3D G3DSA:3.30.70.1400 486 706 1.5E-90 T 14-10-2018 PhaeoP54_03754 4d7435b5fba923d71367d7eff802656f 806 Gene3D G3DSA:3.50.50.60 8 383 1.8E-128 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PhaeoP54_03754 4d7435b5fba923d71367d7eff802656f 806 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 699 792 5.4E-15 T 14-10-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 PhaeoP54_03754 4d7435b5fba923d71367d7eff802656f 806 SUPERFAMILY SSF101790 731 804 1.96E-17 T 14-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal PhaeoP54_03754 4d7435b5fba923d71367d7eff802656f 806 SUPERFAMILY SSF51905 6 389 3.76E-55 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PhaeoP54_03754 4d7435b5fba923d71367d7eff802656f 806 Gene3D G3DSA:3.30.1360.120 428 682 1.5E-90 T 14-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 PhaeoP54_03754 4d7435b5fba923d71367d7eff802656f 806 SUPERFAMILY SSF54373 220 324 9.81E-31 T 14-10-2018 PhaeoP54_03754 4d7435b5fba923d71367d7eff802656f 806 SUPERFAMILY SSF103025 416 710 2.51E-83 T 14-10-2018 PhaeoP54_03754 4d7435b5fba923d71367d7eff802656f 806 Pfam PF01571 Aminomethyltransferase folate-binding domain 424 692 3.4E-60 T 14-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain PhaeoP54_03754 4d7435b5fba923d71367d7eff802656f 806 Pfam PF16350 FAD dependent oxidoreductase central domain 367 419 1.2E-15 T 14-10-2018 IPR032503 FAD dependent oxidoreductase, central domain PhaeoP54_03754 4d7435b5fba923d71367d7eff802656f 806 Pfam PF01266 FAD dependent oxidoreductase 7 364 1.6E-54 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 PhaeoP54_03754 4d7435b5fba923d71367d7eff802656f 806 Gene3D G3DSA:3.30.9.10 86 325 1.8E-128 T 14-10-2018 PhaeoP54_00249 b55baf26dfa1b490a5cf0d15ec7c7f90 394 Gene3D G3DSA:2.70.70.10 235 388 5.3E-15 T 14-10-2018 IPR011055 Duplicated hybrid motif PhaeoP54_00249 b55baf26dfa1b490a5cf0d15ec7c7f90 394 SUPERFAMILY SSF51261 241 386 1.57E-8 T 14-10-2018 IPR011055 Duplicated hybrid motif PhaeoP54_00249 b55baf26dfa1b490a5cf0d15ec7c7f90 394 Pfam PF01551 Peptidase family M23 277 383 2.6E-6 T 14-10-2018 IPR016047 Peptidase M23 PhaeoP54_00898 a2b0344963a335cdf4d443741fa5eb0e 178 Pfam PF00578 AhpC/TSA family 6 140 3.2E-18 T 14-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 PhaeoP54_00898 a2b0344963a335cdf4d443741fa5eb0e 178 Gene3D G3DSA:3.40.30.10 5 168 9.5E-23 T 14-10-2018 PhaeoP54_00898 a2b0344963a335cdf4d443741fa5eb0e 178 SUPERFAMILY SSF52833 1 170 1.09E-28 T 14-10-2018 IPR036249 Thioredoxin-like superfamily PhaeoP54_00017 af0d13d4d4ce182dc477b583e72011a3 208 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 43 66 2.7E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PhaeoP54_00017 af0d13d4d4ce182dc477b583e72011a3 208 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 22 35 2.7E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PhaeoP54_00017 af0d13d4d4ce182dc477b583e72011a3 208 Pfam PF00440 Bacterial regulatory proteins, tetR family 22 68 2.5E-13 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PhaeoP54_00017 af0d13d4d4ce182dc477b583e72011a3 208 Gene3D G3DSA:1.10.357.10 5 204 5.1E-23 T 14-10-2018 PhaeoP54_00017 af0d13d4d4ce182dc477b583e72011a3 208 SUPERFAMILY SSF46689 8 92 8.98E-18 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PhaeoP54_00804 d6ad4d1f0055d59455bace26e57d1bba 405 SUPERFAMILY SSF103473 4 373 1.44E-39 T 14-10-2018 IPR036259 MFS transporter superfamily PhaeoP54_00804 d6ad4d1f0055d59455bace26e57d1bba 405 Gene3D G3DSA:1.20.1250.20 1 187 1.2E-13 T 14-10-2018 PhaeoP54_00804 d6ad4d1f0055d59455bace26e57d1bba 405 Gene3D G3DSA:1.20.1250.20 195 404 3.9E-21 T 14-10-2018 PhaeoP54_00804 d6ad4d1f0055d59455bace26e57d1bba 405 Pfam PF07690 Major Facilitator Superfamily 203 379 2.8E-21 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PhaeoP54_00804 d6ad4d1f0055d59455bace26e57d1bba 405 Pfam PF07690 Major Facilitator Superfamily 9 170 9.7E-10 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PhaeoP54_03824 57a9c19866950f1c9a4371a4ff572a5e 99 TIGRFAM TIGR02384 RelB_DinJ: addiction module antitoxin, RelB/DinJ family 5 60 1.8E-14 T 14-10-2018 IPR007337 RelB antitoxin/Antitoxin DinJ PhaeoP54_03824 57a9c19866950f1c9a4371a4ff572a5e 99 Gene3D G3DSA:1.10.1220.10 3 51 2.3E-13 T 14-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 PhaeoP54_03824 57a9c19866950f1c9a4371a4ff572a5e 99 Pfam PF04221 RelB antitoxin 5 54 1.0E-14 T 14-10-2018 IPR007337 RelB antitoxin/Antitoxin DinJ PhaeoP54_00526 041ee45b88eaac5fb1d23eab327aeefa 483 SMART SM01230 139 402 2.0E-78 T 14-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PhaeoP54_00526 041ee45b88eaac5fb1d23eab327aeefa 483 SUPERFAMILY SSF55931 144 481 6.21E-92 T 14-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 PhaeoP54_00526 041ee45b88eaac5fb1d23eab327aeefa 483 Pfam PF00120 Glutamine synthetase, catalytic domain 144 479 4.6E-82 T 14-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PhaeoP54_00526 041ee45b88eaac5fb1d23eab327aeefa 483 Gene3D G3DSA:3.30.590.10 143 483 2.2E-94 T 14-10-2018 PhaeoP54_00526 041ee45b88eaac5fb1d23eab327aeefa 483 SUPERFAMILY SSF54368 27 137 1.57E-15 T 14-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PhaeoP54_00526 041ee45b88eaac5fb1d23eab327aeefa 483 Gene3D G3DSA:3.10.20.70 21 140 9.2E-10 T 14-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PhaeoP54_01006 a6f4d06181b91c7080b3fc8b6807b530 260 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 103 123 - T 14-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 PhaeoP54_01006 a6f4d06181b91c7080b3fc8b6807b530 260 SUPERFAMILY SSF52096 1 259 4.36E-71 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily PhaeoP54_01006 a6f4d06181b91c7080b3fc8b6807b530 260 Gene3D G3DSA:1.10.12.10 204 260 1.7E-13 T 14-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal PhaeoP54_01006 a6f4d06181b91c7080b3fc8b6807b530 260 Gene3D G3DSA:3.90.226.10 2 198 4.9E-61 T 14-10-2018 PhaeoP54_01006 a6f4d06181b91c7080b3fc8b6807b530 260 Pfam PF00378 Enoyl-CoA hydratase/isomerase 12 259 6.1E-50 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 PhaeoP54_00605 249efbeabc3b7288bfb4e6fa14d91572 474 Gene3D G3DSA:3.30.70.2740 344 429 9.4E-24 T 14-10-2018 PhaeoP54_00605 249efbeabc3b7288bfb4e6fa14d91572 474 Gene3D G3DSA:3.30.70.2190 221 342 6.0E-31 T 14-10-2018 PhaeoP54_00605 249efbeabc3b7288bfb4e6fa14d91572 474 Pfam PF01565 FAD binding domain 44 181 2.4E-31 T 14-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 PhaeoP54_00605 249efbeabc3b7288bfb4e6fa14d91572 474 Pfam PF02913 FAD linked oxidases, C-terminal domain 221 469 9.9E-50 T 14-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 PhaeoP54_00605 249efbeabc3b7288bfb4e6fa14d91572 474 Gene3D G3DSA:3.30.465.10 101 219 5.4E-40 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 PhaeoP54_00605 249efbeabc3b7288bfb4e6fa14d91572 474 SUPERFAMILY SSF55103 225 471 2.13E-55 T 14-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 PhaeoP54_00605 249efbeabc3b7288bfb4e6fa14d91572 474 SUPERFAMILY SSF56176 10 221 3.57E-59 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 PhaeoP54_00605 249efbeabc3b7288bfb4e6fa14d91572 474 Gene3D G3DSA:3.30.43.10 3 97 3.7E-15 T 14-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 PhaeoP54_00605 249efbeabc3b7288bfb4e6fa14d91572 474 Gene3D G3DSA:1.10.45.10 430 470 1.9E-15 T 14-10-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 PhaeoP54_00891 49c7248a2e02dee02e6f3c44f91db211 105 Gene3D G3DSA:1.10.287.1080 1 93 1.0E-27 T 14-10-2018 PhaeoP54_00891 49c7248a2e02dee02e6f3c44f91db211 105 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 4 87 1.2E-29 T 14-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 PhaeoP54_00891 49c7248a2e02dee02e6f3c44f91db211 105 SUPERFAMILY SSF101386 4 92 2.24E-23 T 14-10-2018 PhaeoP54_00891 49c7248a2e02dee02e6f3c44f91db211 105 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 1 87 19.119 T 14-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 PhaeoP54_00891 49c7248a2e02dee02e6f3c44f91db211 105 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 4 90 1.2E-14 T 14-10-2018 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31 PhaeoP54_01709 367ab1327f543a0d29ab0bd072a569a8 237 SMART SM00382 26 212 2.4E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_01709 367ab1327f543a0d29ab0bd072a569a8 237 Pfam PF00005 ABC transporter 18 162 1.4E-19 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PhaeoP54_01709 367ab1327f543a0d29ab0bd072a569a8 237 Gene3D G3DSA:3.40.50.300 1 231 1.7E-48 T 14-10-2018 PhaeoP54_01709 367ab1327f543a0d29ab0bd072a569a8 237 SUPERFAMILY SSF52540 2 233 7.72E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_03429 d34339ed775780f086a5419f675b9eb2 408 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 10 18 - T 14-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 PhaeoP54_03429 d34339ed775780f086a5419f675b9eb2 408 Gene3D G3DSA:3.90.1260.10 180 407 3.1E-97 T 14-10-2018 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 PhaeoP54_03429 d34339ed775780f086a5419f675b9eb2 408 Pfam PF00764 Arginosuccinate synthase 8 398 3.4E-153 T 14-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 PhaeoP54_03429 d34339ed775780f086a5419f675b9eb2 408 TIGRFAM TIGR00032 argG: argininosuccinate synthase 6 400 1.5E-141 T 14-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 PhaeoP54_03429 d34339ed775780f086a5419f675b9eb2 408 SUPERFAMILY SSF69864 179 402 5.62E-92 T 14-10-2018 PhaeoP54_03429 d34339ed775780f086a5419f675b9eb2 408 Gene3D G3DSA:3.40.50.620 5 176 7.0E-68 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PhaeoP54_03429 d34339ed775780f086a5419f675b9eb2 408 SUPERFAMILY SSF52402 3 174 2.43E-47 T 14-10-2018 PhaeoP54_03429 d34339ed775780f086a5419f675b9eb2 408 Hamap MF_00005 Argininosuccinate synthase [argG]. 4 404 52.646 T 14-10-2018 IPR023434 Argininosuccinate synthase, type 1 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 PhaeoP54_03429 d34339ed775780f086a5419f675b9eb2 408 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 120 131 - T 14-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 PhaeoP54_03110 c290b7e6110ddb9fe000d57dc9c67acd 390 SUPERFAMILY SSF53383 2 388 4.4E-103 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PhaeoP54_03110 c290b7e6110ddb9fe000d57dc9c67acd 390 TIGRFAM TIGR04350 C_S_lyase_PatB: putative C-S lyase 3 386 1.8E-119 T 14-10-2018 IPR027619 Putative C-S lyase KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8 PhaeoP54_03110 c290b7e6110ddb9fe000d57dc9c67acd 390 Gene3D G3DSA:3.40.640.10 68 291 1.2E-131 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PhaeoP54_03110 c290b7e6110ddb9fe000d57dc9c67acd 390 Gene3D G3DSA:3.90.1150.10 11 382 1.2E-131 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 PhaeoP54_03110 c290b7e6110ddb9fe000d57dc9c67acd 390 Pfam PF00155 Aminotransferase class I and II 44 382 5.2E-43 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 PhaeoP54_01651 5fbded942d8a34aa5b04f1b545937147 417 Pfam PF07221 N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase) 46 392 3.1E-101 T 14-10-2018 PhaeoP54_01651 5fbded942d8a34aa5b04f1b545937147 417 SUPERFAMILY SSF48208 25 397 1.9E-95 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 PhaeoP54_01651 5fbded942d8a34aa5b04f1b545937147 417 Gene3D G3DSA:1.50.10.10 15 410 8.2E-127 T 14-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 PhaeoP54_02223 06149f32f13093b7861ed7e073a4f0a6 396 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 9 391 1.3E-128 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 PhaeoP54_02223 06149f32f13093b7861ed7e073a4f0a6 396 Hamap MF_02056 O-succinylhomoserine sulfhydrylase [metZ]. 9 392 52.491 T 14-10-2018 IPR006234 O-succinylhomoserine sulfhydrylase GO:0071268 PhaeoP54_02223 06149f32f13093b7861ed7e073a4f0a6 396 TIGRFAM TIGR01325 O_suc_HS_sulf: O-succinylhomoserine sulfhydrylase 9 391 1.7E-167 T 14-10-2018 IPR006234 O-succinylhomoserine sulfhydrylase GO:0071268 PhaeoP54_02223 06149f32f13093b7861ed7e073a4f0a6 396 Gene3D G3DSA:3.90.1150.10 260 396 1.7E-45 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 PhaeoP54_02223 06149f32f13093b7861ed7e073a4f0a6 396 Gene3D G3DSA:3.40.640.10 6 258 2.9E-85 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PhaeoP54_02223 06149f32f13093b7861ed7e073a4f0a6 396 SUPERFAMILY SSF53383 28 391 1.34E-114 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PhaeoP54_02223 06149f32f13093b7861ed7e073a4f0a6 396 PIRSF PIRSF001434 1 395 6.6E-125 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 PhaeoP54_03005 19f66f251781591af4381b53ae05cd8c 122 Gene3D G3DSA:1.10.8.50 1 72 2.1E-27 T 14-10-2018 PhaeoP54_03005 19f66f251781591af4381b53ae05cd8c 122 PIRSF PIRSF002134 1 122 4.8E-45 T 14-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PhaeoP54_03005 19f66f251781591af4381b53ae05cd8c 122 ProSitePatterns PS00646 Ribosomal protein S13 signature. 88 101 - T 14-10-2018 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PhaeoP54_03005 19f66f251781591af4381b53ae05cd8c 122 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 115 3.0E-54 T 14-10-2018 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 PhaeoP54_03005 19f66f251781591af4381b53ae05cd8c 122 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 119 27.057 T 14-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PhaeoP54_03005 19f66f251781591af4381b53ae05cd8c 122 SUPERFAMILY SSF46946 2 121 1.51E-46 T 14-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 PhaeoP54_03005 19f66f251781591af4381b53ae05cd8c 122 Gene3D G3DSA:4.10.910.10 73 122 4.8E-27 T 14-10-2018 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PhaeoP54_03005 19f66f251781591af4381b53ae05cd8c 122 Pfam PF00416 Ribosomal protein S13/S18 3 109 2.1E-31 T 14-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PhaeoP54_00404 563bb506dcc98ebdb01b06462ce8248c 380 Gene3D G3DSA:3.20.20.140 1 122 1.9E-9 T 14-10-2018 PhaeoP54_00404 563bb506dcc98ebdb01b06462ce8248c 380 TIGRFAM TIGR02318 phosphono_phnM: phosphonate metabolism protein PhnM 7 379 9.4E-129 T 14-10-2018 IPR012696 Phosphonate metabolism PhnM GO:0019700 KEGG: 00440+3.6.1.63|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 PhaeoP54_00404 563bb506dcc98ebdb01b06462ce8248c 380 SUPERFAMILY SSF51556 54 347 2.83E-11 T 14-10-2018 IPR032466 Metal-dependent hydrolase PhaeoP54_00404 563bb506dcc98ebdb01b06462ce8248c 380 Pfam PF01979 Amidohydrolase family 211 360 4.8E-5 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 PhaeoP54_00404 563bb506dcc98ebdb01b06462ce8248c 380 PIRSF PIRSF038971 3 380 1.7E-149 T 14-10-2018 IPR012696 Phosphonate metabolism PhnM GO:0019700 KEGG: 00440+3.6.1.63|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 PhaeoP54_00404 563bb506dcc98ebdb01b06462ce8248c 380 SUPERFAMILY SSF51338 4 364 6.79E-13 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 PhaeoP54_03659 295b7dc5c5d056008bbae7bc67b0fe19 291 Pfam PF01740 STAS domain 174 273 1.0E-10 T 14-10-2018 IPR002645 STAS domain PhaeoP54_03659 295b7dc5c5d056008bbae7bc67b0fe19 291 Gene3D G3DSA:3.30.750.24 164 282 8.3E-38 T 14-10-2018 IPR036513 STAS domain superfamily PhaeoP54_03659 295b7dc5c5d056008bbae7bc67b0fe19 291 SUPERFAMILY SSF52091 164 269 5.3E-19 T 14-10-2018 IPR036513 STAS domain superfamily PhaeoP54_03659 295b7dc5c5d056008bbae7bc67b0fe19 291 Pfam PF14361 RsbT co-antagonist protein rsbRD N-terminal domain 11 114 4.1E-20 T 14-10-2018 IPR025751 RsbT co-antagonist protein RsbRD, N-terminal domain PhaeoP54_03244 d02ceb00b0de6fc6373ec390ce2a58c4 137 Pfam PF12680 SnoaL-like domain 8 101 4.7E-8 T 14-10-2018 IPR037401 SnoaL-like domain PhaeoP54_03244 d02ceb00b0de6fc6373ec390ce2a58c4 137 SUPERFAMILY SSF54427 3 108 2.31E-21 T 14-10-2018 IPR032710 NTF2-like domain superfamily PhaeoP54_03244 d02ceb00b0de6fc6373ec390ce2a58c4 137 Gene3D G3DSA:3.10.450.50 1 137 3.8E-37 T 14-10-2018 PhaeoP54_02080 9bebd93fa708d49063e1d6040fb9e237 485 Gene3D G3DSA:3.40.309.10 254 483 2.0E-84 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 PhaeoP54_02080 9bebd93fa708d49063e1d6040fb9e237 485 Gene3D G3DSA:3.40.605.10 1 253 1.4E-95 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 PhaeoP54_02080 9bebd93fa708d49063e1d6040fb9e237 485 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 278 289 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 PhaeoP54_02080 9bebd93fa708d49063e1d6040fb9e237 485 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 250 257 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 PhaeoP54_02080 9bebd93fa708d49063e1d6040fb9e237 485 SUPERFAMILY SSF53720 6 480 7.98E-165 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 PhaeoP54_02080 9bebd93fa708d49063e1d6040fb9e237 485 Pfam PF00171 Aldehyde dehydrogenase family 18 474 2.2E-171 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 PhaeoP54_02080 9bebd93fa708d49063e1d6040fb9e237 485 TIGRFAM TIGR01804 BADH: betaine-aldehyde dehydrogenase 12 472 5.8E-212 T 14-10-2018 IPR011264 Betaine aldehyde dehydrogenase GO:0008802|GO:0019285|GO:0046872 KEGG: 00260+1.2.1.8|MetaCyc: PWY-3722|MetaCyc: PWY-7494 PhaeoP54_04050 190ec4cdbda54ccf0f2f2a4e63bd1662 618 TIGRFAM TIGR01842 type_I_sec_PrtD: type I secretion system ATPase 27 569 9.0E-195 T 14-10-2018 IPR010128 ATPase, type I secretion system, PrtD GO:0005524|GO:0008565|GO:0016021|GO:0030253|GO:0030256 PhaeoP54_04050 190ec4cdbda54ccf0f2f2a4e63bd1662 618 Pfam PF00664 ABC transporter transmembrane region 32 289 8.6E-11 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 PhaeoP54_04050 190ec4cdbda54ccf0f2f2a4e63bd1662 618 Pfam PF00005 ABC transporter 362 510 8.4E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PhaeoP54_04050 190ec4cdbda54ccf0f2f2a4e63bd1662 618 Gene3D G3DSA:3.40.50.300 339 595 2.8E-64 T 14-10-2018 PhaeoP54_04050 190ec4cdbda54ccf0f2f2a4e63bd1662 618 SUPERFAMILY SSF90123 23 329 4.32E-44 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 PhaeoP54_04050 190ec4cdbda54ccf0f2f2a4e63bd1662 618 Gene3D G3DSA:1.20.1560.10 19 328 6.2E-37 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 PhaeoP54_04050 190ec4cdbda54ccf0f2f2a4e63bd1662 618 SMART SM00382 371 557 1.1E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_04050 190ec4cdbda54ccf0f2f2a4e63bd1662 618 SUPERFAMILY SSF52540 358 570 6.71E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_01009 d51f72c8caa3b9f441eb8d7fb0a27bd2 201 Gene3D G3DSA:3.30.460.80 1 132 6.1E-44 T 14-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PhaeoP54_01009 d51f72c8caa3b9f441eb8d7fb0a27bd2 201 TIGRFAM TIGR01961 NuoC_fam: NADH (or F420H2) dehydrogenase, subunit C 32 151 1.9E-44 T 14-10-2018 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PhaeoP54_01009 d51f72c8caa3b9f441eb8d7fb0a27bd2 201 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 84 139 2.0E-24 T 14-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PhaeoP54_01009 d51f72c8caa3b9f441eb8d7fb0a27bd2 201 ProSitePatterns PS00542 Respiratory chain NADH dehydrogenase 30 Kd subunit signature. 113 134 - T 14-10-2018 IPR020396 NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PhaeoP54_01009 d51f72c8caa3b9f441eb8d7fb0a27bd2 201 SUPERFAMILY SSF143243 8 185 1.44E-62 T 14-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PhaeoP54_01009 d51f72c8caa3b9f441eb8d7fb0a27bd2 201 Hamap MF_01357 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic [ndhJ]. 8 160 31.58 T 14-10-2018 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PhaeoP54_01009 d51f72c8caa3b9f441eb8d7fb0a27bd2 201 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 33 153 2.4E-45 T 14-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PhaeoP54_02582 7b25a4aa97f1d755ab2d577d3f2d0748 261 Gene3D G3DSA:1.10.12.10 204 261 8.7E-22 T 14-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal PhaeoP54_02582 7b25a4aa97f1d755ab2d577d3f2d0748 261 SUPERFAMILY SSF52096 1 260 1.51E-81 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily PhaeoP54_02582 7b25a4aa97f1d755ab2d577d3f2d0748 261 Pfam PF00378 Enoyl-CoA hydratase/isomerase 14 260 7.7E-62 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 PhaeoP54_02582 7b25a4aa97f1d755ab2d577d3f2d0748 261 Gene3D G3DSA:3.90.226.10 1 203 1.5E-67 T 14-10-2018 PhaeoP54_02582 7b25a4aa97f1d755ab2d577d3f2d0748 261 TIGRFAM TIGR02280 PaaB1: phenylacetate degradation probable enoyl-CoA hydratase PaaB 6 261 2.4E-116 T 14-10-2018 IPR011968 Phenylacetate degradation probable enoyl-CoA hydratase PaaB GO:0010124 KEGG: 00360+5.3.3.18 PhaeoP54_00565 bf1c362fe9940d092de0e476a7b1ec30 169 Pfam PF00691 OmpA family 62 157 5.6E-22 T 14-10-2018 IPR006665 OmpA-like domain PhaeoP54_00565 bf1c362fe9940d092de0e476a7b1ec30 169 Hamap MF_02204 Peptidoglycan-associated lipoprotein [pal]. 2 163 28.424 T 14-10-2018 IPR039001 Peptidoglycan-associated lipoprotein GO:0009279|GO:0051301 PhaeoP54_00565 bf1c362fe9940d092de0e476a7b1ec30 169 ProSitePatterns PS01068 OmpA-like domain. 95 139 - T 14-10-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 PhaeoP54_00565 bf1c362fe9940d092de0e476a7b1ec30 169 Gene3D G3DSA:3.30.1330.60 46 163 3.0E-33 T 14-10-2018 IPR036737 OmpA-like domain superfamily PhaeoP54_00565 bf1c362fe9940d092de0e476a7b1ec30 169 TIGRFAM TIGR02802 Pal_lipo: peptidoglycan-associated lipoprotein 61 162 1.6E-41 T 14-10-2018 IPR014169 Peptidoglycan-associated lipoprotein, C-terminal GO:0009279 PhaeoP54_00565 bf1c362fe9940d092de0e476a7b1ec30 169 PRINTS PR01021 OMPA domain signature 108 124 1.8E-14 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 PhaeoP54_00565 bf1c362fe9940d092de0e476a7b1ec30 169 PRINTS PR01021 OMPA domain signature 93 108 1.8E-14 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 PhaeoP54_00565 bf1c362fe9940d092de0e476a7b1ec30 169 PRINTS PR01021 OMPA domain signature 63 85 1.8E-14 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 PhaeoP54_00565 bf1c362fe9940d092de0e476a7b1ec30 169 SUPERFAMILY SSF103088 51 161 1.57E-33 T 14-10-2018 IPR036737 OmpA-like domain superfamily PhaeoP54_02551 ae152ec66c4d9ff9cba0dd35e0641f4b 186 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 25 163 1.9E-10 T 14-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 PhaeoP54_00110 d24859a3e1954f3ef082a147b1d99def 214 Pfam PF00440 Bacterial regulatory proteins, tetR family 18 62 1.9E-15 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PhaeoP54_00110 d24859a3e1954f3ef082a147b1d99def 214 Gene3D G3DSA:1.10.10.60 12 63 1.8E-18 T 14-10-2018 PhaeoP54_00110 d24859a3e1954f3ef082a147b1d99def 214 SUPERFAMILY SSF46689 8 87 1.18E-18 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PhaeoP54_00110 d24859a3e1954f3ef082a147b1d99def 214 SUPERFAMILY SSF48498 85 195 1.33E-11 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily PhaeoP54_00110 d24859a3e1954f3ef082a147b1d99def 214 ProSitePatterns PS01081 TetR-type HTH domain signature. 29 59 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site PhaeoP54_00110 d24859a3e1954f3ef082a147b1d99def 214 Pfam PF14246 AefR-like transcriptional repressor, C-terminal region 149 203 6.4E-19 T 14-10-2018 IPR039536 Transcriptional regulator TetR, C-terminal, Proteobacteria type PhaeoP54_00110 d24859a3e1954f3ef082a147b1d99def 214 Gene3D G3DSA:1.10.357.10 70 206 5.5E-39 T 14-10-2018 PhaeoP54_00110 d24859a3e1954f3ef082a147b1d99def 214 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 38 61 6.2E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PhaeoP54_00110 d24859a3e1954f3ef082a147b1d99def 214 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 17 30 6.2E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PhaeoP54_02625 6c5dddbd119d76f24afa211ef260026c 285 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 70 2.4E-21 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PhaeoP54_02625 6c5dddbd119d76f24afa211ef260026c 285 SUPERFAMILY SSF46785 6 116 1.41E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_02625 6c5dddbd119d76f24afa211ef260026c 285 SUPERFAMILY SSF53850 95 270 1.81E-15 T 14-10-2018 PhaeoP54_02625 6c5dddbd119d76f24afa211ef260026c 285 Gene3D G3DSA:1.10.10.10 10 98 5.4E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_02625 6c5dddbd119d76f24afa211ef260026c 285 Gene3D G3DSA:3.40.190.10 164 257 1.4E-22 T 14-10-2018 PhaeoP54_02625 6c5dddbd119d76f24afa211ef260026c 285 Gene3D G3DSA:3.40.190.10 109 275 1.4E-22 T 14-10-2018 PhaeoP54_02625 6c5dddbd119d76f24afa211ef260026c 285 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 26 37 3.7E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PhaeoP54_02625 6c5dddbd119d76f24afa211ef260026c 285 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 37 47 3.7E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PhaeoP54_02625 6c5dddbd119d76f24afa211ef260026c 285 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 47 58 3.7E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PhaeoP54_02625 6c5dddbd119d76f24afa211ef260026c 285 Pfam PF03466 LysR substrate binding domain 94 270 2.1E-12 T 14-10-2018 IPR005119 LysR, substrate-binding PhaeoP54_02562 1e2a7cf91da54d5b056a1c989b936ec9 151 Hamap MF_00116 Deoxyuridine 5'-triphosphate nucleotidohydrolase [dut]. 4 150 33.314 T 14-10-2018 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|KEGG: 00983+3.6.1.23 PhaeoP54_02562 1e2a7cf91da54d5b056a1c989b936ec9 151 SUPERFAMILY SSF51283 13 149 2.88E-49 T 14-10-2018 IPR036157 dUTPase-like superfamily PhaeoP54_02562 1e2a7cf91da54d5b056a1c989b936ec9 151 Pfam PF00692 dUTPase 16 149 3.5E-32 T 14-10-2018 IPR029054 dUTPase-like PhaeoP54_02562 1e2a7cf91da54d5b056a1c989b936ec9 151 TIGRFAM TIGR00576 dut: dUTP diphosphatase 13 150 6.5E-53 T 14-10-2018 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|KEGG: 00983+3.6.1.23 PhaeoP54_02562 1e2a7cf91da54d5b056a1c989b936ec9 151 Gene3D G3DSA:2.70.40.10 6 150 7.0E-54 T 14-10-2018 IPR036157 dUTPase-like superfamily PhaeoP54_03414 06d59aef56432f26ff395f74a0ff147d 213 SUPERFAMILY SSF141523 76 212 1.57E-27 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like PhaeoP54_03414 06d59aef56432f26ff395f74a0ff147d 213 Gene3D G3DSA:2.40.440.10 38 213 6.4E-38 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like PhaeoP54_03414 06d59aef56432f26ff395f74a0ff147d 213 Pfam PF03734 L,D-transpeptidase catalytic domain 83 210 2.2E-13 T 14-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 PhaeoP54_02501 f0f85c6e6aaa4c78bef3e4571ff5fe73 148 Pfam PF08592 Domain of unknown function (DUF1772) 19 145 5.3E-14 T 14-10-2018 PhaeoP54_02288 6cb176b0865990090bf2a4d8d53abd4f 102 Gene3D G3DSA:1.20.120.910 4 102 2.8E-14 T 14-10-2018 PhaeoP54_03210 32af14aa05288c0880d91a5c62483031 433 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 242 428 5.5E-27 T 14-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 PhaeoP54_03210 32af14aa05288c0880d91a5c62483031 433 SUPERFAMILY SSF55073 239 430 3.61E-47 T 14-10-2018 IPR029787 Nucleotide cyclase PhaeoP54_03210 32af14aa05288c0880d91a5c62483031 433 Gene3D G3DSA:3.30.70.1230 236 433 9.8E-50 T 14-10-2018 IPR029787 Nucleotide cyclase PhaeoP54_03210 32af14aa05288c0880d91a5c62483031 433 SMART SM00044 209 406 2.4E-12 T 14-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 PhaeoP54_03195 1ffc293fbd101a7c125f7bad881606c8 427 Gene3D G3DSA:3.40.50.2300 141 280 2.4E-74 T 14-10-2018 PhaeoP54_03195 1ffc293fbd101a7c125f7bad881606c8 427 Pfam PF13458 Periplasmic binding protein 25 385 1.5E-70 T 14-10-2018 IPR028081 Leucine-binding protein domain PhaeoP54_03195 1ffc293fbd101a7c125f7bad881606c8 427 SUPERFAMILY SSF53822 28 388 3.73E-47 T 14-10-2018 IPR028082 Periplasmic binding protein-like I PhaeoP54_03195 1ffc293fbd101a7c125f7bad881606c8 427 Gene3D G3DSA:3.40.50.2300 32 351 2.4E-74 T 14-10-2018 PhaeoP54_02673 7da4653e1b7ee5136725b487be67f1a4 649 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 304 315 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PhaeoP54_02673 7da4653e1b7ee5136725b487be67f1a4 649 Pfam PF12838 4Fe-4S dicluster domain 276 318 1.9E-7 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PhaeoP54_02673 7da4653e1b7ee5136725b487be67f1a4 649 Gene3D G3DSA:3.30.70.20 495 568 2.4E-12 T 14-10-2018 PhaeoP54_02673 7da4653e1b7ee5136725b487be67f1a4 649 SUPERFAMILY SSF54862 250 608 7.79E-41 T 14-10-2018 PhaeoP54_02673 7da4653e1b7ee5136725b487be67f1a4 649 Pfam PF13187 4Fe-4S dicluster domain 500 547 1.7E-7 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PhaeoP54_02673 7da4653e1b7ee5136725b487be67f1a4 649 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 532 543 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PhaeoP54_02673 7da4653e1b7ee5136725b487be67f1a4 649 Gene3D G3DSA:3.30.70.20 269 338 2.2E-14 T 14-10-2018 PhaeoP54_00215 d9716988c9717a2a70e4b9d1dd4c71bd 439 SUPERFAMILY SSF56954 8 435 3.53E-41 T 14-10-2018 PhaeoP54_00215 d9716988c9717a2a70e4b9d1dd4c71bd 439 Pfam PF02321 Outer membrane efflux protein 271 429 2.8E-13 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 PhaeoP54_00215 d9716988c9717a2a70e4b9d1dd4c71bd 439 Pfam PF02321 Outer membrane efflux protein 88 248 2.6E-11 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 PhaeoP54_00215 d9716988c9717a2a70e4b9d1dd4c71bd 439 Gene3D G3DSA:1.20.1600.10 85 436 4.0E-33 T 14-10-2018 PhaeoP54_03789 06d5b454d515bc3d6275d60907ae8914 232 Gene3D G3DSA:1.10.3720.10 2 226 3.1E-53 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_03789 06d5b454d515bc3d6275d60907ae8914 232 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 27 223 4.4E-17 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PhaeoP54_03789 06d5b454d515bc3d6275d60907ae8914 232 TIGRFAM TIGR02141 modB_ABC: molybdate ABC transporter, permease protein 13 222 3.5E-66 T 14-10-2018 IPR011867 Molybdate ABC transporter, permease protein GO:0015098|GO:0015689|GO:0016021 PhaeoP54_03789 06d5b454d515bc3d6275d60907ae8914 232 SUPERFAMILY SSF161098 4 219 8.76E-45 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_01648 c9800d7229a5f9ac79e37f61473744c0 480 Pfam PF01569 PAP2 superfamily 302 436 7.5E-7 T 14-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase PhaeoP54_01648 c9800d7229a5f9ac79e37f61473744c0 480 SUPERFAMILY SSF48317 286 436 1.7E-16 T 14-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily PhaeoP54_03235 314cc4aaf999e6685d16836726750b92 538 Gene3D G3DSA:3.40.50.150 19 250 3.8E-23 T 14-10-2018 PhaeoP54_03235 314cc4aaf999e6685d16836726750b92 538 Pfam PF13847 Methyltransferase domain 42 154 5.0E-16 T 14-10-2018 IPR025714 Methyltransferase domain PhaeoP54_03235 314cc4aaf999e6685d16836726750b92 538 Pfam PF10119 Predicted methyltransferase regulatory domain 220 302 6.4E-29 T 14-10-2018 IPR018773 Methyltransferase regulatory domain, predicted PhaeoP54_03235 314cc4aaf999e6685d16836726750b92 538 SUPERFAMILY SSF53335 40 198 3.35E-27 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PhaeoP54_02956 6ad463a4a0484ad74fb8956057cc9684 302 SUPERFAMILY SSF46689 252 298 2.82E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PhaeoP54_02956 6ad463a4a0484ad74fb8956057cc9684 302 Pfam PF12833 Helix-turn-helix domain 221 298 1.2E-21 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PhaeoP54_02956 6ad463a4a0484ad74fb8956057cc9684 302 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 282 298 3.0E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PhaeoP54_02956 6ad463a4a0484ad74fb8956057cc9684 302 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 267 282 3.0E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PhaeoP54_02956 6ad463a4a0484ad74fb8956057cc9684 302 SMART SM00342 215 298 2.1E-24 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PhaeoP54_02956 6ad463a4a0484ad74fb8956057cc9684 302 Gene3D G3DSA:1.10.10.60 194 301 1.8E-25 T 14-10-2018 PhaeoP54_02956 6ad463a4a0484ad74fb8956057cc9684 302 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 252 294 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 PhaeoP54_02956 6ad463a4a0484ad74fb8956057cc9684 302 SUPERFAMILY SSF46689 202 249 1.25E-5 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PhaeoP54_02956 6ad463a4a0484ad74fb8956057cc9684 302 SUPERFAMILY SSF51182 47 125 1.13E-6 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily PhaeoP54_02559 27019b16b137d7e5ffa12d67907d345e 273 SUPERFAMILY SSF161098 48 252 6.02E-43 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_02559 27019b16b137d7e5ffa12d67907d345e 273 Gene3D G3DSA:1.10.3720.10 40 271 2.2E-54 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_02559 27019b16b137d7e5ffa12d67907d345e 273 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 72 269 5.8E-26 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PhaeoP54_02559 27019b16b137d7e5ffa12d67907d345e 273 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 47 129 9.8E-15 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 PhaeoP54_00225 6a06b79a921cbc694f16ec7f90b4a93f 214 SUPERFAMILY SSF49482 2 214 7.46E-61 T 14-10-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 PhaeoP54_00225 6a06b79a921cbc694f16ec7f90b4a93f 214 Pfam PF00775 Dioxygenase 39 204 2.9E-18 T 14-10-2018 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 PhaeoP54_00225 6a06b79a921cbc694f16ec7f90b4a93f 214 ProSitePatterns PS00083 Intradiol ring-cleavage dioxygenases signature. 50 78 - T 14-10-2018 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 PhaeoP54_00225 6a06b79a921cbc694f16ec7f90b4a93f 214 Gene3D G3DSA:2.60.130.10 1 214 1.7E-72 T 14-10-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 PhaeoP54_00225 6a06b79a921cbc694f16ec7f90b4a93f 214 TIGRFAM TIGR02423 protocat_alph: protocatechuate 3,4-dioxygenase, alpha subunit 7 214 9.4E-72 T 14-10-2018 IPR012786 Protocatechuate 3,4-dioxygenase, alpha subunit GO:0005506|GO:0018578|GO:0019439|GO:0055114 KEGG: 00362+1.13.11.3|KEGG: 00624+1.13.11.3|MetaCyc: PWY-6041 PhaeoP54_01514 65b00b81f2224ca26f0525befd441a0e 95 Gene3D G3DSA:3.30.70.100 1 94 4.2E-32 T 14-10-2018 PhaeoP54_01514 65b00b81f2224ca26f0525befd441a0e 95 Pfam PF07045 Domain of unknown function (DUF1330) 2 92 3.5E-34 T 14-10-2018 IPR010753 Domain of unknown function DUF1330 PhaeoP54_01514 65b00b81f2224ca26f0525befd441a0e 95 SUPERFAMILY SSF54909 1 92 1.68E-31 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel PhaeoP54_01562 c16cff91f56616ffe8953aebd345e72d 265 Gene3D G3DSA:3.40.50.300 17 263 1.7E-65 T 14-10-2018 PhaeoP54_01562 c16cff91f56616ffe8953aebd345e72d 265 SUPERFAMILY SSF52540 18 252 2.23E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_01562 c16cff91f56616ffe8953aebd345e72d 265 Pfam PF00005 ABC transporter 34 189 5.1E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PhaeoP54_01562 c16cff91f56616ffe8953aebd345e72d 265 SMART SM00382 42 253 7.1E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_01562 c16cff91f56616ffe8953aebd345e72d 265 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 18 265 8.1E-123 T 14-10-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 PhaeoP54_01562 c16cff91f56616ffe8953aebd345e72d 265 ProSitePatterns PS00211 ABC transporters family signature. 162 176 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PhaeoP54_03873 c7ad3ae3091735aafc683de1e15ad3c2 314 SUPERFAMILY SSF161111 15 210 9.94E-54 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily PhaeoP54_03873 c7ad3ae3091735aafc683de1e15ad3c2 314 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 17 292 6.4E-73 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 PhaeoP54_03873 c7ad3ae3091735aafc683de1e15ad3c2 314 SUPERFAMILY SSF160240 213 289 3.14E-9 T 14-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 PhaeoP54_03873 c7ad3ae3091735aafc683de1e15ad3c2 314 Gene3D G3DSA:1.20.1510.10 16 209 7.3E-47 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily PhaeoP54_03873 c7ad3ae3091735aafc683de1e15ad3c2 314 Pfam PF01545 Cation efflux family 21 202 1.0E-45 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 PhaeoP54_03363 6690ab00a602361b6a86d629bd6e15e8 294 SUPERFAMILY SSF103481 183 286 4.18E-12 T 14-10-2018 PhaeoP54_03363 6690ab00a602361b6a86d629bd6e15e8 294 Pfam PF00892 EamA-like transporter family 148 281 2.2E-12 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 PhaeoP54_03363 6690ab00a602361b6a86d629bd6e15e8 294 Pfam PF00892 EamA-like transporter family 5 137 8.7E-21 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 PhaeoP54_03363 6690ab00a602361b6a86d629bd6e15e8 294 SUPERFAMILY SSF103481 38 138 7.72E-15 T 14-10-2018 PhaeoP54_03966 e09327fefc5f8951a10587f29668c2a4 324 Gene3D G3DSA:3.90.25.10 156 281 6.6E-50 T 14-10-2018 PhaeoP54_03966 e09327fefc5f8951a10587f29668c2a4 324 SUPERFAMILY SSF51735 3 290 4.31E-39 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PhaeoP54_03966 e09327fefc5f8951a10587f29668c2a4 324 Pfam PF13460 NAD(P)H-binding 11 203 9.5E-14 T 14-10-2018 IPR016040 NAD(P)-binding domain PhaeoP54_03966 e09327fefc5f8951a10587f29668c2a4 324 Gene3D G3DSA:3.40.50.720 7 280 6.6E-50 T 14-10-2018 PhaeoP54_02220 ea4f1bae2606f7d8583d40e6432950c8 482 PIRSF PIRSF006247 1 482 2.8E-170 T 14-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 PhaeoP54_02220 ea4f1bae2606f7d8583d40e6432950c8 482 Pfam PF02386 Cation transport protein 42 471 1.0E-48 T 14-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 PhaeoP54_00930 38dcfec9f4b161f0b726a83634d5df6c 403 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 26 373 2.1E-105 T 14-10-2018 IPR013437 Probable peptidoglycan glycosyltransferase FtsW GO:0009252|GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 PhaeoP54_00930 38dcfec9f4b161f0b726a83634d5df6c 403 Pfam PF01098 Cell cycle protein 30 374 2.0E-75 T 14-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 PhaeoP54_00659 b725b56c820f45b44d304580b66a6b32 143 Pfam PF07370 Protein of unknown function (DUF1489) 7 143 4.6E-55 T 14-10-2018 IPR008320 Uncharacterised conserved protein UCP032025 PhaeoP54_00659 b725b56c820f45b44d304580b66a6b32 143 PIRSF PIRSF032025 4 143 2.9E-48 T 14-10-2018 IPR008320 Uncharacterised conserved protein UCP032025 PhaeoP54_00725 ea3f83f69d0ab116ff635abae093306d 151 Pfam PF13412 Winged helix-turn-helix DNA-binding 2 49 3.3E-12 T 14-10-2018 PhaeoP54_00725 ea3f83f69d0ab116ff635abae093306d 151 SMART SM00344 2 111 7.2E-23 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 PhaeoP54_00725 ea3f83f69d0ab116ff635abae093306d 151 Gene3D G3DSA:1.10.10.10 3 53 3.2E-15 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_00725 ea3f83f69d0ab116ff635abae093306d 151 SUPERFAMILY SSF54909 64 150 1.09E-17 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel PhaeoP54_00725 ea3f83f69d0ab116ff635abae093306d 151 Gene3D G3DSA:3.30.70.920 55 139 5.5E-24 T 14-10-2018 PhaeoP54_00725 ea3f83f69d0ab116ff635abae093306d 151 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 29 48 4.1E-7 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 PhaeoP54_00725 ea3f83f69d0ab116ff635abae093306d 151 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 18 29 4.1E-7 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 PhaeoP54_00725 ea3f83f69d0ab116ff635abae093306d 151 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 2 18 4.1E-7 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 PhaeoP54_00725 ea3f83f69d0ab116ff635abae093306d 151 SUPERFAMILY SSF46785 1 61 2.81E-12 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_00725 ea3f83f69d0ab116ff635abae093306d 151 Pfam PF01037 Lrp/AsnC ligand binding domain 68 141 1.0E-19 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain PhaeoP54_00781 cc4a17864e4e760a3616cbafdf904e64 242 SUPERFAMILY SSF53790 2 238 4.97E-43 T 14-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 PhaeoP54_00781 cc4a17864e4e760a3616cbafdf904e64 242 Gene3D G3DSA:3.30.950.10 138 240 2.9E-12 T 14-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 PhaeoP54_00781 cc4a17864e4e760a3616cbafdf904e64 242 Gene3D G3DSA:3.40.1010.10 5 136 2.4E-23 T 14-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 PhaeoP54_00781 cc4a17864e4e760a3616cbafdf904e64 242 TIGRFAM TIGR01467 cobI_cbiL: precorrin-2 C(20)-methyltransferase 6 236 2.0E-65 T 14-10-2018 IPR006364 Precorrin-2 C(20)-methyltransferase domain GO:0008757|GO:0009236 PhaeoP54_00781 cc4a17864e4e760a3616cbafdf904e64 242 PIRSF PIRSF036427 4 241 4.2E-60 T 14-10-2018 IPR012382 Precorrin-2 C(20)-methyltransferase GO:0008757|GO:0009236|GO:0030788 PhaeoP54_00781 cc4a17864e4e760a3616cbafdf904e64 242 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 7 219 1.0E-41 T 14-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 PhaeoP54_03335 2f4a8699ec26c2468870a3417c4df1c4 200 Pfam PF13417 Glutathione S-transferase, N-terminal domain 3 79 5.4E-16 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 PhaeoP54_03335 2f4a8699ec26c2468870a3417c4df1c4 200 Gene3D G3DSA:3.40.30.10 3 191 1.8E-62 T 14-10-2018 PhaeoP54_03335 2f4a8699ec26c2468870a3417c4df1c4 200 SUPERFAMILY SSF47616 73 198 6.03E-10 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily PhaeoP54_03335 2f4a8699ec26c2468870a3417c4df1c4 200 SUPERFAMILY SSF52833 1 80 1.37E-15 T 14-10-2018 IPR036249 Thioredoxin-like superfamily PhaeoP54_03335 2f4a8699ec26c2468870a3417c4df1c4 200 Gene3D G3DSA:1.20.1050.10 82 189 1.8E-62 T 14-10-2018 PhaeoP54_01820 2a47d666bc717be0f50bbabc97150cc3 99 Pfam PF03992 Antibiotic biosynthesis monooxygenase 10 71 1.2E-9 T 14-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain PhaeoP54_01820 2a47d666bc717be0f50bbabc97150cc3 99 SUPERFAMILY SSF54909 9 96 2.97E-14 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel PhaeoP54_01820 2a47d666bc717be0f50bbabc97150cc3 99 Gene3D G3DSA:3.30.70.100 2 99 4.9E-30 T 14-10-2018 PhaeoP54_01327 d0dabf338fedfda059f5d35f0188ec84 86 SUPERFAMILY SSF64307 12 85 5.89E-24 T 14-10-2018 IPR036868 TusA-like domain superfamily PhaeoP54_01327 d0dabf338fedfda059f5d35f0188ec84 86 Gene3D G3DSA:3.30.110.40 7 86 5.3E-28 T 14-10-2018 IPR036868 TusA-like domain superfamily PhaeoP54_01327 d0dabf338fedfda059f5d35f0188ec84 86 Pfam PF01206 Sulfurtransferase TusA 16 84 8.3E-22 T 14-10-2018 IPR001455 TusA-like domain PhaeoP54_01327 d0dabf338fedfda059f5d35f0188ec84 86 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 17 41 - T 14-10-2018 IPR001455 TusA-like domain PhaeoP54_02309 cac7f56f8e163060c3dec52039df35a3 202 Gene3D G3DSA:1.10.10.60 2 46 1.3E-6 T 14-10-2018 PhaeoP54_02309 cac7f56f8e163060c3dec52039df35a3 202 Pfam PF07750 GcrA cell cycle regulator 1 199 2.9E-49 T 14-10-2018 IPR011681 GcrA cell cycle regulator PhaeoP54_03093 4375140b311be9e8d0229229f21f872f 253 SUPERFAMILY SSF63892 11 251 2.09E-92 T 14-10-2018 IPR036130 Pyridoxine 5'-phosphate synthase GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 PhaeoP54_03093 4375140b311be9e8d0229229f21f872f 253 Pfam PF03740 Pyridoxal phosphate biosynthesis protein PdxJ 12 248 8.7E-97 T 14-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 PhaeoP54_03093 4375140b311be9e8d0229229f21f872f 253 TIGRFAM TIGR00559 pdxJ: pyridoxine 5'-phosphate synthase 12 249 5.4E-90 T 14-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 PhaeoP54_03093 4375140b311be9e8d0229229f21f872f 253 Hamap MF_00279 Pyridoxine 5'-phosphate synthase [pdxJ]. 1 253 118.044 T 14-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 PhaeoP54_03093 4375140b311be9e8d0229229f21f872f 253 Gene3D G3DSA:3.20.20.70 4 253 1.8E-96 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PhaeoP54_01697 5c49f18140aac55dcd4a51eabcef0d61 78 SUPERFAMILY SSF82657 1 78 3.01E-21 T 14-10-2018 IPR036065 BolA-like superfamily PhaeoP54_01697 5c49f18140aac55dcd4a51eabcef0d61 78 Gene3D G3DSA:3.30.300.90 3 78 2.6E-22 T 14-10-2018 PhaeoP54_01697 5c49f18140aac55dcd4a51eabcef0d61 78 Pfam PF01722 BolA-like protein 25 78 3.6E-12 T 14-10-2018 IPR002634 BolA protein PhaeoP54_01697 5c49f18140aac55dcd4a51eabcef0d61 78 PIRSF PIRSF003113 1 78 2.2E-17 T 14-10-2018 IPR002634 BolA protein PhaeoP54_02546 599fa823f7e3830ca4203333360e48b5 523 Pfam PF00682 HMGL-like 10 276 2.4E-92 T 14-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 PhaeoP54_02546 599fa823f7e3830ca4203333360e48b5 523 Gene3D G3DSA:3.20.20.70 6 280 5.7E-105 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PhaeoP54_02546 599fa823f7e3830ca4203333360e48b5 523 Gene3D G3DSA:3.30.160.270 397 502 2.3E-10 T 14-10-2018 PhaeoP54_02546 599fa823f7e3830ca4203333360e48b5 523 SUPERFAMILY SSF110921 392 501 5.1E-27 T 14-10-2018 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 PhaeoP54_02546 599fa823f7e3830ca4203333360e48b5 523 Hamap MF_01025 2-isopropylmalate synthase [leuA]. 7 511 40.48 T 14-10-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 PhaeoP54_02546 599fa823f7e3830ca4203333360e48b5 523 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 203 216 - T 14-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 PhaeoP54_02546 599fa823f7e3830ca4203333360e48b5 523 TIGRFAM TIGR00973 leuA_bact: 2-isopropylmalate synthase 9 499 1.3E-202 T 14-10-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 PhaeoP54_02546 599fa823f7e3830ca4203333360e48b5 523 SUPERFAMILY SSF51569 7 295 6.04E-98 T 14-10-2018 PhaeoP54_02546 599fa823f7e3830ca4203333360e48b5 523 SMART SM00917 373 502 1.2E-38 T 14-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 PhaeoP54_02546 599fa823f7e3830ca4203333360e48b5 523 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 17 33 - T 14-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 PhaeoP54_02546 599fa823f7e3830ca4203333360e48b5 523 Pfam PF08502 LeuA allosteric (dimerisation) domain 373 501 1.2E-34 T 14-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 PhaeoP54_02546 599fa823f7e3830ca4203333360e48b5 523 Gene3D G3DSA:1.10.238.260 284 396 1.1E-37 T 14-10-2018 PhaeoP54_02987 44e0c2f983f0686b8252b7ac479431a6 242 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 10 238 2.0E-51 T 14-10-2018 PhaeoP54_02987 44e0c2f983f0686b8252b7ac479431a6 242 SUPERFAMILY SSF51735 3 241 1.52E-64 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PhaeoP54_02987 44e0c2f983f0686b8252b7ac479431a6 242 Gene3D G3DSA:3.40.50.720 3 242 9.0E-73 T 14-10-2018 PhaeoP54_02987 44e0c2f983f0686b8252b7ac479431a6 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 3.2E-43 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_02987 44e0c2f983f0686b8252b7ac479431a6 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 3.2E-43 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_02987 44e0c2f983f0686b8252b7ac479431a6 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 3.2E-43 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_02987 44e0c2f983f0686b8252b7ac479431a6 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 204 224 3.2E-43 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_02987 44e0c2f983f0686b8252b7ac479431a6 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 75 86 3.2E-43 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_02987 44e0c2f983f0686b8252b7ac479431a6 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 3.2E-43 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_02987 44e0c2f983f0686b8252b7ac479431a6 242 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 141 169 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 PhaeoP54_02987 44e0c2f983f0686b8252b7ac479431a6 242 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 75 86 1.5E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_02987 44e0c2f983f0686b8252b7ac479431a6 242 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 1.5E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_02987 44e0c2f983f0686b8252b7ac479431a6 242 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 1.5E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_03612 b0e5f2cdcc6d4a279c4d57259c382f11 391 Gene3D G3DSA:3.30.390.10 38 121 1.1E-112 T 14-10-2018 IPR029017 Enolase-like, N-terminal PhaeoP54_03612 b0e5f2cdcc6d4a279c4d57259c382f11 391 Pfam PF13378 Enolase C-terminal domain-like 153 377 2.2E-45 T 14-10-2018 IPR029065 Enolase C-terminal domain-like PhaeoP54_03612 b0e5f2cdcc6d4a279c4d57259c382f11 391 SUPERFAMILY SSF54826 25 131 3.21E-20 T 14-10-2018 PhaeoP54_03612 b0e5f2cdcc6d4a279c4d57259c382f11 391 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 38 129 5.2E-11 T 14-10-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain PhaeoP54_03612 b0e5f2cdcc6d4a279c4d57259c382f11 391 SUPERFAMILY SSF51604 117 381 2.36E-62 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily PhaeoP54_03612 b0e5f2cdcc6d4a279c4d57259c382f11 391 SMART SM00922 148 253 1.4E-17 T 14-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal PhaeoP54_03612 b0e5f2cdcc6d4a279c4d57259c382f11 391 Gene3D G3DSA:3.20.20.120 122 374 1.1E-112 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily PhaeoP54_00630 67791fd14f1653bbf05ffd10d8cca12a 173 SUPERFAMILY SSF46785 23 84 1.92E-14 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_00630 67791fd14f1653bbf05ffd10d8cca12a 173 Gene3D G3DSA:3.30.70.920 78 160 3.7E-15 T 14-10-2018 PhaeoP54_00630 67791fd14f1653bbf05ffd10d8cca12a 173 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 24 40 1.3E-9 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 PhaeoP54_00630 67791fd14f1653bbf05ffd10d8cca12a 173 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 40 51 1.3E-9 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 PhaeoP54_00630 67791fd14f1653bbf05ffd10d8cca12a 173 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 51 70 1.3E-9 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 PhaeoP54_00630 67791fd14f1653bbf05ffd10d8cca12a 173 ProSitePatterns PS00519 AsnC-type HTH domain signature. 42 68 - T 14-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site PhaeoP54_00630 67791fd14f1653bbf05ffd10d8cca12a 173 Gene3D G3DSA:1.10.10.10 21 77 1.6E-14 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_00630 67791fd14f1653bbf05ffd10d8cca12a 173 Pfam PF01037 Lrp/AsnC ligand binding domain 91 159 2.6E-12 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain PhaeoP54_00630 67791fd14f1653bbf05ffd10d8cca12a 173 Pfam PF13412 Winged helix-turn-helix DNA-binding 24 70 7.0E-13 T 14-10-2018 PhaeoP54_00630 67791fd14f1653bbf05ffd10d8cca12a 173 SUPERFAMILY SSF54909 84 173 9.92E-14 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel PhaeoP54_00630 67791fd14f1653bbf05ffd10d8cca12a 173 SMART SM00344 24 133 1.5E-21 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 PhaeoP54_02916 0fa9d7954d9c46ef3941ec2939d32d15 334 Pfam PF09297 NADH pyrophosphatase zinc ribbon domain 164 194 9.2E-9 T 14-10-2018 IPR015376 Zinc ribbon, NADH pyrophosphatase GO:0016787|GO:0046872 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381|MetaCyc: PWY-7761 PhaeoP54_02916 0fa9d7954d9c46ef3941ec2939d32d15 334 Pfam PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain 37 161 5.9E-14 T 14-10-2018 IPR015375 NADH pyrophosphatase-like, N-terminal GO:0016787 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381|MetaCyc: PWY-7761 PhaeoP54_02916 0fa9d7954d9c46ef3941ec2939d32d15 334 Gene3D G3DSA:3.90.79.20 98 195 9.7E-11 T 14-10-2018 PhaeoP54_02916 0fa9d7954d9c46ef3941ec2939d32d15 334 SUPERFAMILY SSF55811 147 331 6.63E-44 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 PhaeoP54_02916 0fa9d7954d9c46ef3941ec2939d32d15 334 PRINTS PR00502 NUDIX hydrolase family signature 224 238 4.7E-5 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 PhaeoP54_02916 0fa9d7954d9c46ef3941ec2939d32d15 334 PRINTS PR00502 NUDIX hydrolase family signature 238 253 4.7E-5 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 PhaeoP54_02916 0fa9d7954d9c46ef3941ec2939d32d15 334 ProSitePatterns PS00893 Nudix box signature. 229 250 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 PhaeoP54_02916 0fa9d7954d9c46ef3941ec2939d32d15 334 Pfam PF00293 NUDIX domain 200 303 2.8E-15 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 PhaeoP54_02916 0fa9d7954d9c46ef3941ec2939d32d15 334 Gene3D G3DSA:3.90.79.10 197 333 6.4E-37 T 14-10-2018 PhaeoP54_00335 b406a6309c866b642df5a1cec6abbd9f 320 SUPERFAMILY SSF51735 5 144 9.88E-46 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PhaeoP54_00335 b406a6309c866b642df5a1cec6abbd9f 320 Hamap MF_00487 Malate dehydrogenase [mdh]. 3 313 46.144 T 14-10-2018 IPR011275 Malate dehydrogenase, type 3 GO:0016616|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 PhaeoP54_00335 b406a6309c866b642df5a1cec6abbd9f 320 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 147 306 2.8E-28 T 14-10-2018 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 PhaeoP54_00335 b406a6309c866b642df5a1cec6abbd9f 320 TIGRFAM TIGR01763 MalateDH_bact: malate dehydrogenase, NAD-dependent 3 309 3.9E-127 T 14-10-2018 IPR011275 Malate dehydrogenase, type 3 GO:0016616|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 PhaeoP54_00335 b406a6309c866b642df5a1cec6abbd9f 320 Gene3D G3DSA:3.90.110.10 146 320 4.7E-65 T 14-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 PhaeoP54_00335 b406a6309c866b642df5a1cec6abbd9f 320 SUPERFAMILY SSF56327 144 312 4.04E-55 T 14-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 PhaeoP54_00335 b406a6309c866b642df5a1cec6abbd9f 320 PRINTS PR00086 L-lactate dehydrogenase signature 171 184 1.7E-28 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 PhaeoP54_00335 b406a6309c866b642df5a1cec6abbd9f 320 PRINTS PR00086 L-lactate dehydrogenase signature 117 137 1.7E-28 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 PhaeoP54_00335 b406a6309c866b642df5a1cec6abbd9f 320 PRINTS PR00086 L-lactate dehydrogenase signature 5 29 1.7E-28 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 PhaeoP54_00335 b406a6309c866b642df5a1cec6abbd9f 320 PRINTS PR00086 L-lactate dehydrogenase signature 141 159 1.7E-28 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 PhaeoP54_00335 b406a6309c866b642df5a1cec6abbd9f 320 PRINTS PR00086 L-lactate dehydrogenase signature 29 53 1.7E-28 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 PhaeoP54_00335 b406a6309c866b642df5a1cec6abbd9f 320 PIRSF PIRSF000102 1 314 1.5E-102 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 PhaeoP54_00335 b406a6309c866b642df5a1cec6abbd9f 320 Gene3D G3DSA:3.40.50.720 1 145 8.7E-55 T 14-10-2018 PhaeoP54_00335 b406a6309c866b642df5a1cec6abbd9f 320 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 5 143 4.1E-38 T 14-10-2018 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 PhaeoP54_00270 f78bfecf1d23b255baf3ca08db0bc65a 456 PIRSF PIRSF017901 3 456 1.1E-177 T 14-10-2018 IPR035434 Glutamate--cysteine ligase, bacteria and plant GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 PhaeoP54_00270 f78bfecf1d23b255baf3ca08db0bc65a 456 SUPERFAMILY SSF55931 23 453 8.04E-68 T 14-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 PhaeoP54_00270 f78bfecf1d23b255baf3ca08db0bc65a 456 TIGRFAM TIGR01436 glu_cys_lig_pln: glutamate--cysteine ligase 10 456 1.5E-197 T 14-10-2018 IPR011556 Glutamate--cysteine ligase, plant-type GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 PhaeoP54_00270 f78bfecf1d23b255baf3ca08db0bc65a 456 Gene3D G3DSA:3.30.590.20 8 456 2.8E-184 T 14-10-2018 PhaeoP54_00270 f78bfecf1d23b255baf3ca08db0bc65a 456 Pfam PF04107 Glutamate-cysteine ligase family 2(GCS2) 58 358 2.0E-93 T 14-10-2018 IPR006336 Glutamate--cysteine ligase, GCS2 GO:0004357|GO:0042398 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 PhaeoP54_00255 93173374b9088278996312861add2d2c 253 Pfam PF01061 ABC-2 type transporter 6 216 7.2E-33 T 14-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 PhaeoP54_00255 93173374b9088278996312861add2d2c 253 PIRSF PIRSF006648 7 249 8.8E-28 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 PhaeoP54_00255 93173374b9088278996312861add2d2c 253 PRINTS PR00164 ABC-2 type transport system membrane protein signature 55 77 9.9E-19 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 PhaeoP54_00255 93173374b9088278996312861add2d2c 253 PRINTS PR00164 ABC-2 type transport system membrane protein signature 136 160 9.9E-19 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 PhaeoP54_00255 93173374b9088278996312861add2d2c 253 PRINTS PR00164 ABC-2 type transport system membrane protein signature 193 212 9.9E-19 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 PhaeoP54_00255 93173374b9088278996312861add2d2c 253 PRINTS PR00164 ABC-2 type transport system membrane protein signature 99 124 9.9E-19 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 PhaeoP54_00255 93173374b9088278996312861add2d2c 253 PRINTS PR00164 ABC-2 type transport system membrane protein signature 173 192 9.9E-19 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 PhaeoP54_00688 b4a51502d9816e9245dacf4567940461 330 Gene3D G3DSA:3.40.1190.20 15 326 2.6E-73 T 14-10-2018 IPR029056 Ribokinase-like PhaeoP54_00688 b4a51502d9816e9245dacf4567940461 330 TIGRFAM TIGR04382 myo_inos_iolC_N: 5-dehydro-2-deoxygluconokinase 15 321 3.6E-98 T 14-10-2018 IPR030830 5-Dehydro-2-deoxygluconokinase KEGG: 00562+2.7.1.92 PhaeoP54_00688 b4a51502d9816e9245dacf4567940461 330 SUPERFAMILY SSF53613 15 321 8.26E-69 T 14-10-2018 IPR029056 Ribokinase-like PhaeoP54_00688 b4a51502d9816e9245dacf4567940461 330 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 265 278 - T 14-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 PhaeoP54_00688 b4a51502d9816e9245dacf4567940461 330 Pfam PF00294 pfkB family carbohydrate kinase 17 313 2.6E-50 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB PhaeoP54_03318 dc45632b3fb98c18b013cfaaa61763f1 183 Gene3D G3DSA:3.40.50.1110 7 182 1.1E-13 T 14-10-2018 IPR036514 SGNH hydrolase superfamily PhaeoP54_03318 dc45632b3fb98c18b013cfaaa61763f1 183 SUPERFAMILY SSF52266 8 182 9.16E-19 T 14-10-2018 PhaeoP54_03318 dc45632b3fb98c18b013cfaaa61763f1 183 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 8 169 2.8E-10 T 14-10-2018 IPR013830 SGNH hydrolase-type esterase domain PhaeoP54_01399 70d65f5dba36245674f02aca1240069c 274 SUPERFAMILY SSF46689 218 267 1.22E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PhaeoP54_01399 70d65f5dba36245674f02aca1240069c 274 Pfam PF12833 Helix-turn-helix domain 187 265 5.0E-21 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PhaeoP54_01399 70d65f5dba36245674f02aca1240069c 274 Gene3D G3DSA:1.10.10.60 167 272 3.0E-23 T 14-10-2018 PhaeoP54_01399 70d65f5dba36245674f02aca1240069c 274 SMART SM00342 180 263 4.8E-23 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PhaeoP54_01399 70d65f5dba36245674f02aca1240069c 274 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 217 259 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 PhaeoP54_01399 70d65f5dba36245674f02aca1240069c 274 SUPERFAMILY SSF51215 31 127 7.72E-6 T 14-10-2018 IPR037923 Transcription regulator HTH-like PhaeoP54_00058 5d1d23dc3a5ab1af14246298cce11768 535 SUPERFAMILY SSF52540 3 248 3.09E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_00058 5d1d23dc3a5ab1af14246298cce11768 535 ProSitePatterns PS00211 ABC transporters family signature. 421 435 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PhaeoP54_00058 5d1d23dc3a5ab1af14246298cce11768 535 Pfam PF00005 ABC transporter 19 176 9.1E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PhaeoP54_00058 5d1d23dc3a5ab1af14246298cce11768 535 SUPERFAMILY SSF52540 272 519 5.85E-64 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_00058 5d1d23dc3a5ab1af14246298cce11768 535 Pfam PF00005 ABC transporter 299 448 1.2E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PhaeoP54_00058 5d1d23dc3a5ab1af14246298cce11768 535 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 228 253 8.6E-4 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 PhaeoP54_00058 5d1d23dc3a5ab1af14246298cce11768 535 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 500 527 2.4E-6 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 PhaeoP54_00058 5d1d23dc3a5ab1af14246298cce11768 535 SMART SM00382 307 498 1.7E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_00058 5d1d23dc3a5ab1af14246298cce11768 535 SMART SM00382 28 226 8.5E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_00058 5d1d23dc3a5ab1af14246298cce11768 535 Gene3D G3DSA:3.40.50.300 273 532 7.0E-80 T 14-10-2018 PhaeoP54_00058 5d1d23dc3a5ab1af14246298cce11768 535 Gene3D G3DSA:3.40.50.300 1 272 3.8E-87 T 14-10-2018 PhaeoP54_00058 5d1d23dc3a5ab1af14246298cce11768 535 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PhaeoP54_00139 a6ac10984a766db2660b0539c488c290 439 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 87 265 2.3E-12 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PhaeoP54_00139 a6ac10984a766db2660b0539c488c290 439 Gene3D G3DSA:1.10.3720.10 2 267 2.5E-37 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_00139 a6ac10984a766db2660b0539c488c290 439 SUPERFAMILY SSF161098 14 261 1.31E-43 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_03299 633a45b1619183c4a18ff5bfbe021b31 538 Gene3D G3DSA:3.30.70.1230 343 533 4.5E-41 T 14-10-2018 IPR029787 Nucleotide cyclase PhaeoP54_03299 633a45b1619183c4a18ff5bfbe021b31 538 Gene3D G3DSA:2.170.150.40 22 134 6.3E-27 T 14-10-2018 PhaeoP54_03299 633a45b1619183c4a18ff5bfbe021b31 538 SUPERFAMILY SSF55073 345 526 4.4E-41 T 14-10-2018 IPR029787 Nucleotide cyclase PhaeoP54_03299 633a45b1619183c4a18ff5bfbe021b31 538 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 353 488 4.6E-16 T 14-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 PhaeoP54_03299 633a45b1619183c4a18ff5bfbe021b31 538 SMART SM00044 317 514 1.6E-4 T 14-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 PhaeoP54_03299 633a45b1619183c4a18ff5bfbe021b31 538 Pfam PF04248 Domain of unknown function (DUF427) 36 127 3.4E-25 T 14-10-2018 IPR007361 Domain of unknown function DUF427 PhaeoP54_01640 70418c99c304cd968bae5da7417f0064 378 Pfam PF13458 Periplasmic binding protein 25 350 1.3E-70 T 14-10-2018 IPR028081 Leucine-binding protein domain PhaeoP54_01640 70418c99c304cd968bae5da7417f0064 378 Gene3D G3DSA:3.40.50.2300 25 342 8.2E-91 T 14-10-2018 PhaeoP54_01640 70418c99c304cd968bae5da7417f0064 378 SUPERFAMILY SSF53822 25 356 7.28E-80 T 14-10-2018 IPR028082 Periplasmic binding protein-like I PhaeoP54_01640 70418c99c304cd968bae5da7417f0064 378 Gene3D G3DSA:3.40.50.2300 137 348 8.2E-91 T 14-10-2018 PhaeoP54_00150 37bb306d755b3d5166485416ade51903 159 PIRSF PIRSF032146 1 159 2.4E-60 T 14-10-2018 IPR008321 Uncharacterised conserved protein UCP032146 PhaeoP54_00150 37bb306d755b3d5166485416ade51903 159 Hamap MF_00678 UPF0262 protein . 1 158 37.796 T 14-10-2018 IPR008321 Uncharacterised conserved protein UCP032146 PhaeoP54_00150 37bb306d755b3d5166485416ade51903 159 Pfam PF06793 Uncharacterised protein family (UPF0262) 2 157 6.3E-68 T 14-10-2018 IPR008321 Uncharacterised conserved protein UCP032146 PhaeoP54_00692 c8bda5c012ea3310b6e8559a7a793052 385 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 146 266 9.0E-7 T 14-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 PhaeoP54_00692 c8bda5c012ea3310b6e8559a7a793052 385 Gene3D G3DSA:3.40.50.720 9 352 1.1E-122 T 14-10-2018 PhaeoP54_00692 c8bda5c012ea3310b6e8559a7a793052 385 Gene3D G3DSA:3.30.360.10 139 377 1.1E-122 T 14-10-2018 PhaeoP54_00692 c8bda5c012ea3310b6e8559a7a793052 385 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 4 134 2.0E-23 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 PhaeoP54_00692 c8bda5c012ea3310b6e8559a7a793052 385 SUPERFAMILY SSF55347 142 316 2.78E-31 T 14-10-2018 PhaeoP54_00692 c8bda5c012ea3310b6e8559a7a793052 385 SUPERFAMILY SSF51735 3 165 2.57E-36 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PhaeoP54_00912 79528c1ee6cf75cd530709ca2566735e 401 Gene3D G3DSA:3.20.20.70 11 381 6.2E-109 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PhaeoP54_00912 79528c1ee6cf75cd530709ca2566735e 401 Pfam PF01070 FMN-dependent dehydrogenase 20 376 6.6E-115 T 14-10-2018 IPR000262 FMN-dependent dehydrogenase GO:0016491 Reactome: R-HSA-9033241 PhaeoP54_00912 79528c1ee6cf75cd530709ca2566735e 401 SUPERFAMILY SSF51395 11 377 1.05E-87 T 14-10-2018 PhaeoP54_00912 79528c1ee6cf75cd530709ca2566735e 401 PIRSF PIRSF000138 1 385 1.8E-112 T 14-10-2018 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent GO:0010181|GO:0016491|GO:0055114 Reactome: R-HSA-9033241 PhaeoP54_02246 cd785bfea684e7f43fc20aed567e0ec1 235 SUPERFAMILY SSF52833 2 80 1.65E-19 T 14-10-2018 IPR036249 Thioredoxin-like superfamily PhaeoP54_02246 cd785bfea684e7f43fc20aed567e0ec1 235 Pfam PF13417 Glutathione S-transferase, N-terminal domain 14 80 3.3E-12 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 PhaeoP54_02246 cd785bfea684e7f43fc20aed567e0ec1 235 Gene3D G3DSA:3.40.30.10 6 212 6.5E-55 T 14-10-2018 PhaeoP54_02246 cd785bfea684e7f43fc20aed567e0ec1 235 SUPERFAMILY SSF47616 85 208 2.09E-15 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily PhaeoP54_02246 cd785bfea684e7f43fc20aed567e0ec1 235 Gene3D G3DSA:1.20.1050.10 83 204 6.5E-55 T 14-10-2018 PhaeoP54_03582 e987d033367914e43577c793d2d5cc36 148 Pfam PF08818 Domain of unknown function (DU1801) 22 127 1.1E-8 T 14-10-2018 IPR014922 Domain of unknown function DUF1801 PhaeoP54_03582 e987d033367914e43577c793d2d5cc36 148 SUPERFAMILY SSF159888 11 125 9.55E-6 T 14-10-2018 PhaeoP54_00441 ea2fced86185fc338a04b273d7149bfd 265 SUPERFAMILY SSF51197 5 263 2.2E-62 T 14-10-2018 PhaeoP54_00441 ea2fced86185fc338a04b273d7149bfd 265 Gene3D G3DSA:2.60.120.620 3 264 1.7E-62 T 14-10-2018 PhaeoP54_00441 ea2fced86185fc338a04b273d7149bfd 265 Pfam PF05721 Phytanoyl-CoA dioxygenase (PhyH) 14 220 1.7E-28 T 14-10-2018 IPR008775 Phytanoyl-CoA dioxygenase PhaeoP54_02810 703b1ae709eea71ae8575bb2d7633a0f 118 SUPERFAMILY SSF54909 1 100 4.13E-29 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel PhaeoP54_02810 703b1ae709eea71ae8575bb2d7633a0f 118 Gene3D G3DSA:3.30.70.100 1 93 1.9E-23 T 14-10-2018 PhaeoP54_02810 703b1ae709eea71ae8575bb2d7633a0f 118 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 76 2.5E-15 T 14-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain PhaeoP54_00547 5367411cfa42a220ad07af074f18949f 311 Gene3D G3DSA:1.10.150.130 13 111 4.5E-16 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal PhaeoP54_00547 5367411cfa42a220ad07af074f18949f 311 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 15 311 51.376 T 14-10-2018 IPR023009 Tyrosine recombinase XerC/XerD PhaeoP54_00547 5367411cfa42a220ad07af074f18949f 311 SUPERFAMILY SSF56349 122 309 6.18E-47 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 PhaeoP54_00547 5367411cfa42a220ad07af074f18949f 311 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 17 104 6.9E-17 T 14-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 PhaeoP54_00547 5367411cfa42a220ad07af074f18949f 311 Gene3D G3DSA:1.10.443.10 119 310 2.5E-46 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 PhaeoP54_00547 5367411cfa42a220ad07af074f18949f 311 Pfam PF00589 Phage integrase family 149 296 2.8E-32 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 PhaeoP54_00547 5367411cfa42a220ad07af074f18949f 311 SUPERFAMILY SSF47823 15 105 5.1E-15 T 14-10-2018 PhaeoP54_03411 6e407f03f45fa711824e7c70f4b479db 353 Gene3D G3DSA:3.40.50.1400 25 349 3.8E-96 T 14-10-2018 PhaeoP54_03411 6e407f03f45fa711824e7c70f4b479db 353 SUPERFAMILY SSF53800 24 352 5.89E-106 T 14-10-2018 PhaeoP54_03411 6e407f03f45fa711824e7c70f4b479db 353 Hamap MF_00323 Ferrochelatase [hemH]. 24 348 36.739 T 14-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 PhaeoP54_03411 6e407f03f45fa711824e7c70f4b479db 353 Pfam PF00762 Ferrochelatase 25 347 3.0E-107 T 14-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 PhaeoP54_03411 6e407f03f45fa711824e7c70f4b479db 353 TIGRFAM TIGR00109 hemH: ferrochelatase 23 347 1.2E-86 T 14-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 PhaeoP54_03411 6e407f03f45fa711824e7c70f4b479db 353 Gene3D G3DSA:3.40.50.1400 190 329 3.8E-96 T 14-10-2018 PhaeoP54_02125 73a2c5497c0afd5beb8f3350e7e86e8c 528 Gene3D G3DSA:3.10.105.10 282 498 7.8E-93 T 14-10-2018 PhaeoP54_02125 73a2c5497c0afd5beb8f3350e7e86e8c 528 SUPERFAMILY SSF53850 47 515 5.59E-111 T 14-10-2018 PhaeoP54_02125 73a2c5497c0afd5beb8f3350e7e86e8c 528 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 18 46 5.2E-4 T 14-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal PhaeoP54_02125 73a2c5497c0afd5beb8f3350e7e86e8c 528 PIRSF PIRSF002741 14 525 3.6E-67 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 PhaeoP54_02125 73a2c5497c0afd5beb8f3350e7e86e8c 528 Gene3D G3DSA:3.90.76.10 65 206 7.8E-93 T 14-10-2018 PhaeoP54_02125 73a2c5497c0afd5beb8f3350e7e86e8c 528 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 98 447 1.0E-70 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain PhaeoP54_02125 73a2c5497c0afd5beb8f3350e7e86e8c 528 Gene3D G3DSA:3.40.190.10 207 508 7.8E-93 T 14-10-2018 PhaeoP54_01819 d2c28a5b1e85ca71aa27a1c10cfd4a4f 895 SUPERFAMILY SSF52016 634 892 7.06E-82 T 14-10-2018 PhaeoP54_01819 d2c28a5b1e85ca71aa27a1c10cfd4a4f 895 Pfam PF00330 Aconitase family (aconitate hydratase) 83 565 1.1E-178 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 PhaeoP54_01819 d2c28a5b1e85ca71aa27a1c10cfd4a4f 895 Pfam PF00694 Aconitase C-terminal domain 695 820 9.6E-43 T 14-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 PhaeoP54_01819 d2c28a5b1e85ca71aa27a1c10cfd4a4f 895 ProSitePatterns PS01244 Aconitase family signature 2. 496 509 - T 14-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 PhaeoP54_01819 d2c28a5b1e85ca71aa27a1c10cfd4a4f 895 Gene3D G3DSA:3.30.499.10 380 593 2.6E-95 T 14-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 PhaeoP54_01819 d2c28a5b1e85ca71aa27a1c10cfd4a4f 895 SUPERFAMILY SSF53732 9 630 8.63E-215 T 14-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 PhaeoP54_01819 d2c28a5b1e85ca71aa27a1c10cfd4a4f 895 ProSitePatterns PS00450 Aconitase family signature 1. 430 446 - T 14-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 PhaeoP54_01819 d2c28a5b1e85ca71aa27a1c10cfd4a4f 895 Gene3D G3DSA:3.20.19.10 657 894 2.6E-100 T 14-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 PhaeoP54_01819 d2c28a5b1e85ca71aa27a1c10cfd4a4f 895 Gene3D G3DSA:1.10.1440.20 594 654 3.7E-18 T 14-10-2018 PhaeoP54_01819 d2c28a5b1e85ca71aa27a1c10cfd4a4f 895 TIGRFAM TIGR01341 aconitase_1: aconitate hydratase 1 22 892 0.0 T 14-10-2018 IPR006249 Aconitase/Iron-responsive element-binding protein 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-917937 PhaeoP54_01819 d2c28a5b1e85ca71aa27a1c10cfd4a4f 895 PRINTS PR00415 Aconitase family signature 152 165 1.9E-41 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 PhaeoP54_01819 d2c28a5b1e85ca71aa27a1c10cfd4a4f 895 PRINTS PR00415 Aconitase family signature 496 509 1.9E-41 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 PhaeoP54_01819 d2c28a5b1e85ca71aa27a1c10cfd4a4f 895 PRINTS PR00415 Aconitase family signature 286 299 1.9E-41 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 PhaeoP54_01819 d2c28a5b1e85ca71aa27a1c10cfd4a4f 895 PRINTS PR00415 Aconitase family signature 224 239 1.9E-41 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 PhaeoP54_01819 d2c28a5b1e85ca71aa27a1c10cfd4a4f 895 PRINTS PR00415 Aconitase family signature 434 445 1.9E-41 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 PhaeoP54_01819 d2c28a5b1e85ca71aa27a1c10cfd4a4f 895 PRINTS PR00415 Aconitase family signature 379 393 1.9E-41 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 PhaeoP54_01819 d2c28a5b1e85ca71aa27a1c10cfd4a4f 895 PRINTS PR00415 Aconitase family signature 300 313 1.9E-41 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 PhaeoP54_01819 d2c28a5b1e85ca71aa27a1c10cfd4a4f 895 PRINTS PR00415 Aconitase family signature 176 184 1.9E-41 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 PhaeoP54_01819 d2c28a5b1e85ca71aa27a1c10cfd4a4f 895 PRINTS PR00415 Aconitase family signature 210 223 1.9E-41 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 PhaeoP54_01819 d2c28a5b1e85ca71aa27a1c10cfd4a4f 895 Gene3D G3DSA:3.30.499.20 8 379 5.4E-151 T 14-10-2018 PhaeoP54_03156 9da46c45d30d019cdf433a23b85d1d45 76 Pfam PF10932 Protein of unknown function (DUF2783) 11 68 1.2E-25 T 14-10-2018 IPR021233 Protein of unknown function DUF2783 PhaeoP54_01425 7a15c389181cf94138946360ab5a2ad6 262 SUPERFAMILY SSF52096 6 261 4.01E-74 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily PhaeoP54_01425 7a15c389181cf94138946360ab5a2ad6 262 Gene3D G3DSA:1.10.12.10 206 262 3.9E-23 T 14-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal PhaeoP54_01425 7a15c389181cf94138946360ab5a2ad6 262 Gene3D G3DSA:3.90.226.10 1 204 3.8E-63 T 14-10-2018 PhaeoP54_01425 7a15c389181cf94138946360ab5a2ad6 262 Pfam PF00378 Enoyl-CoA hydratase/isomerase 9 261 2.5E-52 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 PhaeoP54_00353 a964285c10ea7ed8871089effc2d8e2a 234 Pfam PF01048 Phosphorylase superfamily 16 228 1.4E-36 T 14-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 PhaeoP54_00353 a964285c10ea7ed8871089effc2d8e2a 234 Hamap MF_01627 Purine nucleoside phosphorylase DeoD-type [deoD]. 1 234 42.414 T 14-10-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 PhaeoP54_00353 a964285c10ea7ed8871089effc2d8e2a 234 TIGRFAM TIGR00107 deoD: purine nucleoside phosphorylase 4 232 1.2E-89 T 14-10-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 PhaeoP54_00353 a964285c10ea7ed8871089effc2d8e2a 234 SUPERFAMILY SSF53167 1 233 1.09E-86 T 14-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 PhaeoP54_00353 a964285c10ea7ed8871089effc2d8e2a 234 Gene3D G3DSA:3.40.50.1580 2 233 5.4E-68 T 14-10-2018 PhaeoP54_00353 a964285c10ea7ed8871089effc2d8e2a 234 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 61 76 - T 14-10-2018 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-73614|Reactome: R-HSA-73621 PhaeoP54_01181 651a4d1984ae1e62b10d9a3dbf6367d6 221 SUPERFAMILY SSF52540 7 215 2.17E-14 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_01181 651a4d1984ae1e62b10d9a3dbf6367d6 221 Pfam PF03567 Sulfotransferase family 10 101 2.5E-8 T 14-10-2018 IPR005331 Sulfotransferase GO:0008146|GO:0016021 PhaeoP54_04029 09b7be8f5c33e1e8da64d3e1fb079e1a 182 SUPERFAMILY SSF55166 64 176 1.53E-21 T 14-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 PhaeoP54_04029 09b7be8f5c33e1e8da64d3e1fb079e1a 182 Pfam PF05951 Bacterial protein of unknown function (DUF882) 45 180 5.6E-19 T 14-10-2018 IPR010275 Protein of unknown function DUF882 PhaeoP54_04029 09b7be8f5c33e1e8da64d3e1fb079e1a 182 Gene3D G3DSA:3.30.1380.10 101 182 1.6E-11 T 14-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 PhaeoP54_03746 81e75e75104f2bc39af85233892c4c1b 233 Pfam PF03473 MOSC domain 54 167 8.5E-23 T 14-10-2018 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 PhaeoP54_03746 81e75e75104f2bc39af85233892c4c1b 233 SUPERFAMILY SSF50800 7 230 2.14E-64 T 14-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily PhaeoP54_03746 81e75e75104f2bc39af85233892c4c1b 233 Gene3D G3DSA:2.40.33.20 3 233 1.1E-68 T 14-10-2018 PhaeoP54_03969 2013944479ad47fd86d8206e2fad28d7 279 SUPERFAMILY SSF53474 3 277 1.44E-93 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold PhaeoP54_03969 2013944479ad47fd86d8206e2fad28d7 279 TIGRFAM TIGR02821 fghA_ester_D: S-formylglutathione hydrolase 5 277 7.6E-125 T 14-10-2018 IPR014186 S-formylglutathione hydrolase GO:0018738|GO:0046294 KEGG: 00680+3.1.2.12|MetaCyc: PWY-1801|Reactome: R-HSA-156590 PhaeoP54_03969 2013944479ad47fd86d8206e2fad28d7 279 Pfam PF00756 Putative esterase 23 272 7.9E-67 T 14-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 PhaeoP54_03969 2013944479ad47fd86d8206e2fad28d7 279 Gene3D G3DSA:3.40.50.1820 1 279 4.9E-98 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold PhaeoP54_01098 e97f6902cae446a988aeb03119e80bf8 1132 Gene3D G3DSA:1.10.1660.10 4 78 1.8E-19 T 14-10-2018 PhaeoP54_01098 e97f6902cae446a988aeb03119e80bf8 1132 SMART SM00422 10 79 4.1E-9 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PhaeoP54_01098 e97f6902cae446a988aeb03119e80bf8 1132 SUPERFAMILY SSF46955 10 77 5.49E-15 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily PhaeoP54_01098 e97f6902cae446a988aeb03119e80bf8 1132 Pfam PF13411 MerR HTH family regulatory protein 10 78 1.9E-20 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PhaeoP54_02907 c020d7ff0698207e97b55150c9817528 279 SUPERFAMILY SSF52402 1 147 1.09E-8 T 14-10-2018 PhaeoP54_02907 c020d7ff0698207e97b55150c9817528 279 Gene3D G3DSA:3.40.50.12370 10 279 1.8E-26 T 14-10-2018 PhaeoP54_02907 c020d7ff0698207e97b55150c9817528 279 PRINTS PR01438 Universal stress protein signature 239 251 2.9E-6 T 14-10-2018 IPR006015 Universal stress protein A PhaeoP54_02907 c020d7ff0698207e97b55150c9817528 279 PRINTS PR01438 Universal stress protein signature 257 279 2.9E-6 T 14-10-2018 IPR006015 Universal stress protein A PhaeoP54_02907 c020d7ff0698207e97b55150c9817528 279 Pfam PF00582 Universal stress protein family 156 278 6.0E-11 T 14-10-2018 IPR006016 UspA PhaeoP54_02907 c020d7ff0698207e97b55150c9817528 279 SUPERFAMILY SSF52402 155 279 9.21E-21 T 14-10-2018 PhaeoP54_01132 dd918030b878f850c70ec6152c3f4390 439 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 237 252 - T 14-10-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 PhaeoP54_01132 dd918030b878f850c70ec6152c3f4390 439 SUPERFAMILY SSF55931 105 429 1.28E-101 T 14-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 PhaeoP54_01132 dd918030b878f850c70ec6152c3f4390 439 SMART SM01230 103 356 5.0E-98 T 14-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PhaeoP54_01132 dd918030b878f850c70ec6152c3f4390 439 SUPERFAMILY SSF54368 6 102 1.03E-7 T 14-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PhaeoP54_01132 dd918030b878f850c70ec6152c3f4390 439 Pfam PF00120 Glutamine synthetase, catalytic domain 104 429 7.5E-100 T 14-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PhaeoP54_01132 dd918030b878f850c70ec6152c3f4390 439 Gene3D G3DSA:3.30.590.10 100 434 9.8E-99 T 14-10-2018 PhaeoP54_00656 53edea63f6b441c879c59234d9021d41 159 Pfam PF13276 HTH-like domain 16 56 1.2E-10 T 14-10-2018 IPR025948 HTH-like domain PhaeoP54_00656 53edea63f6b441c879c59234d9021d41 159 SUPERFAMILY SSF53098 73 157 7.89E-23 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily PhaeoP54_00656 53edea63f6b441c879c59234d9021d41 159 Gene3D G3DSA:3.30.420.10 72 158 3.6E-10 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 PhaeoP54_00656 53edea63f6b441c879c59234d9021d41 159 Pfam PF00665 Integrase core domain 80 157 9.4E-20 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 PhaeoP54_01021 2b94fc1d62020a805e59209a8763edbb 200 Gene3D G3DSA:1.20.120.1200 3 166 2.1E-42 T 14-10-2018 PhaeoP54_01021 2b94fc1d62020a805e59209a8763edbb 200 Pfam PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 17 164 3.2E-37 T 14-10-2018 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PhaeoP54_03305 90dc51c5425cc0c0a5b6f1b70a177815 400 Pfam PF02653 Branched-chain amino acid transport system / permease component 43 368 1.9E-37 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 PhaeoP54_03305 90dc51c5425cc0c0a5b6f1b70a177815 400 TIGRFAM TIGR03408 urea_trans_UrtC: urea ABC transporter, permease protein UrtC 38 379 7.3E-89 T 14-10-2018 IPR017778 ABC transporter, urea, permease protein, UrtC PhaeoP54_03410 e02aa456220432c1ccd62c30816ae543 276 SUPERFAMILY SSF53335 72 197 1.53E-13 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PhaeoP54_03410 e02aa456220432c1ccd62c30816ae543 276 Gene3D G3DSA:3.40.50.150 16 240 1.8E-10 T 14-10-2018 PhaeoP54_01487 be7b61a13d8b511baf7f75c124289b57 574 Gene3D G3DSA:3.40.190.10 1 570 3.9E-208 T 14-10-2018 PhaeoP54_01487 be7b61a13d8b511baf7f75c124289b57 574 SUPERFAMILY SSF53850 20 570 2.35E-121 T 14-10-2018 PhaeoP54_01487 be7b61a13d8b511baf7f75c124289b57 574 Gene3D G3DSA:3.10.105.10 283 546 3.9E-208 T 14-10-2018 PhaeoP54_01487 be7b61a13d8b511baf7f75c124289b57 574 PIRSF PIRSF002741 5 573 9.9E-87 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 PhaeoP54_01487 be7b61a13d8b511baf7f75c124289b57 574 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 70 484 1.1E-73 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain PhaeoP54_02870 c0ca290a463002d2e4940c15ec2aec53 122 SUPERFAMILY SSF81301 9 114 1.96E-36 T 14-10-2018 PhaeoP54_02870 c0ca290a463002d2e4940c15ec2aec53 122 Pfam PF02410 Ribosomal silencing factor during starvation 16 110 1.5E-27 T 14-10-2018 PhaeoP54_02870 c0ca290a463002d2e4940c15ec2aec53 122 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 13 110 2.6E-35 T 14-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS PhaeoP54_02870 c0ca290a463002d2e4940c15ec2aec53 122 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 9 111 24.343 T 14-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS PhaeoP54_02870 c0ca290a463002d2e4940c15ec2aec53 122 Gene3D G3DSA:3.30.460.10 8 122 2.7E-39 T 14-10-2018 PhaeoP54_02435 e87033d5972e6cff9f8c93213383d40f 431 Hamap MF_01030 D-serine dehydratase [dsdA]. 1 431 181.174 T 14-10-2018 IPR011780 D-serine ammonia-lyase GO:0008721|GO:0030170|GO:0046416 KEGG: 00260+4.3.1.18 PhaeoP54_02435 e87033d5972e6cff9f8c93213383d40f 431 SUPERFAMILY SSF53686 84 420 8.64E-48 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme PhaeoP54_02435 e87033d5972e6cff9f8c93213383d40f 431 TIGRFAM TIGR02035 D_Ser_am_lyase: D-serine ammonia-lyase 3 423 2.2E-141 T 14-10-2018 IPR011780 D-serine ammonia-lyase GO:0008721|GO:0030170|GO:0046416 KEGG: 00260+4.3.1.18 PhaeoP54_02435 e87033d5972e6cff9f8c93213383d40f 431 Gene3D G3DSA:3.40.50.1100 14 422 1.3E-159 T 14-10-2018 PhaeoP54_02435 e87033d5972e6cff9f8c93213383d40f 431 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 69 377 3.6E-46 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme PhaeoP54_02435 e87033d5972e6cff9f8c93213383d40f 431 Gene3D G3DSA:3.40.50.1100 99 221 1.3E-159 T 14-10-2018 PhaeoP54_00294 28e0821a8fea9fd68f6896b543ce3e37 213 Hamap MF_00316 Molybdenum cofactor guanylyltransferase [mobA]. 4 208 26.252 T 14-10-2018 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 KEGG: 00790+2.7.7.77|MetaCyc: PWY-5964|MetaCyc: PWY-7639 PhaeoP54_00294 28e0821a8fea9fd68f6896b543ce3e37 213 SUPERFAMILY SSF53448 6 209 4.51E-29 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PhaeoP54_00294 28e0821a8fea9fd68f6896b543ce3e37 213 Gene3D G3DSA:3.90.550.10 7 210 1.0E-44 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PhaeoP54_00294 28e0821a8fea9fd68f6896b543ce3e37 213 Pfam PF12804 MobA-like NTP transferase domain 8 175 1.7E-31 T 14-10-2018 IPR025877 MobA-like NTP transferase PhaeoP54_00294 28e0821a8fea9fd68f6896b543ce3e37 213 TIGRFAM TIGR02665 molyb_mobA: molybdenum cofactor guanylyltransferase 8 206 2.8E-57 T 14-10-2018 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 KEGG: 00790+2.7.7.77|MetaCyc: PWY-5964|MetaCyc: PWY-7639 PhaeoP54_03950 d06bcba504a37df3d5c7f20b3f4b1836 374 SUPERFAMILY SSF55347 145 308 2.13E-38 T 14-10-2018 PhaeoP54_03950 d06bcba504a37df3d5c7f20b3f4b1836 374 Gene3D G3DSA:3.40.50.720 14 347 6.2E-128 T 14-10-2018 PhaeoP54_03950 d06bcba504a37df3d5c7f20b3f4b1836 374 Gene3D G3DSA:3.30.360.10 144 372 6.2E-128 T 14-10-2018 PhaeoP54_03950 d06bcba504a37df3d5c7f20b3f4b1836 374 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 10 138 4.4E-25 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 PhaeoP54_03950 d06bcba504a37df3d5c7f20b3f4b1836 374 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 151 271 4.3E-9 T 14-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 PhaeoP54_03950 d06bcba504a37df3d5c7f20b3f4b1836 374 SUPERFAMILY SSF51735 6 171 7.51E-39 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PhaeoP54_02090 25134bb3704ab1c6c3b82016ef9f21c3 246 Gene3D G3DSA:1.10.10.200 1 81 5.5E-34 T 14-10-2018 IPR017856 Integrase-like, N-terminal PhaeoP54_02090 25134bb3704ab1c6c3b82016ef9f21c3 246 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 3 238 35.117 T 14-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PhaeoP54_02090 25134bb3704ab1c6c3b82016ef9f21c3 246 Gene3D G3DSA:3.30.70.980 83 235 6.7E-53 T 14-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PhaeoP54_02090 25134bb3704ab1c6c3b82016ef9f21c3 246 SUPERFAMILY SSF75625 3 246 2.22E-95 T 14-10-2018 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PhaeoP54_02090 25134bb3704ab1c6c3b82016ef9f21c3 246 Gene3D G3DSA:3.30.70.980 132 204 6.7E-53 T 14-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PhaeoP54_02090 25134bb3704ab1c6c3b82016ef9f21c3 246 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 1 237 9.5E-97 T 14-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PhaeoP54_02090 25134bb3704ab1c6c3b82016ef9f21c3 246 Pfam PF01709 Transcriptional regulator 5 236 1.2E-96 T 14-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PhaeoP54_00424 ac37a8417c365949343eb010e60fdf55 985 Gene3D G3DSA:2.60.120.10 852 985 1.4E-22 T 14-10-2018 IPR014710 RmlC-like jelly roll fold PhaeoP54_00424 ac37a8417c365949343eb010e60fdf55 985 SUPERFAMILY SSF51206 854 980 2.23E-21 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like PhaeoP54_00424 ac37a8417c365949343eb010e60fdf55 985 SMART SM00100 861 980 2.1E-5 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain PhaeoP54_00424 ac37a8417c365949343eb010e60fdf55 985 Gene3D G3DSA:3.40.50.300 666 847 7.1E-10 T 14-10-2018 PhaeoP54_00424 ac37a8417c365949343eb010e60fdf55 985 Pfam PF00664 ABC transporter transmembrane region 23 273 1.2E-14 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 PhaeoP54_00424 ac37a8417c365949343eb010e60fdf55 985 Pfam PF00027 Cyclic nucleotide-binding domain 883 967 8.0E-15 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain PhaeoP54_00424 ac37a8417c365949343eb010e60fdf55 985 SUPERFAMILY SSF90123 7 315 1.44E-41 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 PhaeoP54_00424 ac37a8417c365949343eb010e60fdf55 985 Gene3D G3DSA:3.40.50.300 325 473 2.9E-14 T 14-10-2018 PhaeoP54_00424 ac37a8417c365949343eb010e60fdf55 985 SUPERFAMILY SSF52540 337 835 5.93E-14 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_00424 ac37a8417c365949343eb010e60fdf55 985 Gene3D G3DSA:1.20.1560.10 1 309 2.2E-36 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 PhaeoP54_02492 11da2513686c54f930da4d70715253d7 125 Pfam PF02472 Biopolymer transport protein ExbD/TolR 14 124 3.3E-17 T 14-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 PhaeoP54_04036 0a3d048612e49a4d10be019ef98590e1 375 SUPERFAMILY SSF110849 64 170 2.62E-10 T 14-10-2018 IPR036086 ParB/Sulfiredoxin superfamily PhaeoP54_04036 0a3d048612e49a4d10be019ef98590e1 375 Pfam PF02195 ParB-like nuclease domain 75 167 3.0E-5 T 14-10-2018 IPR003115 ParB/Sulfiredoxin PhaeoP54_04036 0a3d048612e49a4d10be019ef98590e1 375 SMART SM00470 67 170 0.0042 T 14-10-2018 IPR003115 ParB/Sulfiredoxin PhaeoP54_02746 9a24920fd6eeb2e4b78a6a8c07ddf974 300 Gene3D G3DSA:1.10.3720.10 85 296 6.1E-21 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_02746 9a24920fd6eeb2e4b78a6a8c07ddf974 300 SUPERFAMILY SSF161098 91 279 1.57E-27 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_02746 9a24920fd6eeb2e4b78a6a8c07ddf974 300 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 29 73 7.2E-11 T 14-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain PhaeoP54_02746 9a24920fd6eeb2e4b78a6a8c07ddf974 300 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 114 295 8.8E-28 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PhaeoP54_00870 934b5a3651fb2877d20071f55f3af848 344 Pfam PF01479 S4 domain 33 66 4.1E-5 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PhaeoP54_00870 934b5a3651fb2877d20071f55f3af848 344 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 16 339 5.1E-83 T 14-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 PhaeoP54_00870 934b5a3651fb2877d20071f55f3af848 344 SUPERFAMILY SSF55174 17 106 2.35E-7 T 14-10-2018 PhaeoP54_00870 934b5a3651fb2877d20071f55f3af848 344 SUPERFAMILY SSF55120 80 340 1.44E-69 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 PhaeoP54_00870 934b5a3651fb2877d20071f55f3af848 344 SMART SM00363 16 84 4.2E-4 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PhaeoP54_00870 934b5a3651fb2877d20071f55f3af848 344 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 140 154 - T 14-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 PhaeoP54_00870 934b5a3651fb2877d20071f55f3af848 344 Pfam PF00849 RNA pseudouridylate synthase 93 268 1.0E-31 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 PhaeoP54_00870 934b5a3651fb2877d20071f55f3af848 344 Gene3D G3DSA:3.30.2350.10 86 342 1.7E-68 T 14-10-2018 PhaeoP54_00870 934b5a3651fb2877d20071f55f3af848 344 Gene3D G3DSA:3.10.290.10 8 77 8.2E-14 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 PhaeoP54_02565 39af53dd1a3240e2b483edc7e9c3a447 292 Pfam PF04545 Sigma-70, region 4 227 278 4.9E-15 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 PhaeoP54_02565 39af53dd1a3240e2b483edc7e9c3a447 292 PRINTS PR00046 Major sigma-70 factor signature 93 101 4.7E-20 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 PhaeoP54_02565 39af53dd1a3240e2b483edc7e9c3a447 292 PRINTS PR00046 Major sigma-70 factor signature 250 265 4.7E-20 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 PhaeoP54_02565 39af53dd1a3240e2b483edc7e9c3a447 292 PRINTS PR00046 Major sigma-70 factor signature 265 276 4.7E-20 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 PhaeoP54_02565 39af53dd1a3240e2b483edc7e9c3a447 292 PRINTS PR00046 Major sigma-70 factor signature 231 243 4.7E-20 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 PhaeoP54_02565 39af53dd1a3240e2b483edc7e9c3a447 292 PRINTS PR00046 Major sigma-70 factor signature 69 82 4.7E-20 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 PhaeoP54_02565 39af53dd1a3240e2b483edc7e9c3a447 292 SUPERFAMILY SSF88946 17 113 3.66E-35 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 PhaeoP54_02565 39af53dd1a3240e2b483edc7e9c3a447 292 Gene3D G3DSA:1.20.120.1810 4 112 6.1E-31 T 14-10-2018 PhaeoP54_02565 39af53dd1a3240e2b483edc7e9c3a447 292 Pfam PF04542 Sigma-70 region 2 45 114 2.9E-19 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 PhaeoP54_02565 39af53dd1a3240e2b483edc7e9c3a447 292 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 41 280 7.3E-30 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 PhaeoP54_02565 39af53dd1a3240e2b483edc7e9c3a447 292 Gene3D G3DSA:1.20.140.160 130 282 2.8E-14 T 14-10-2018 PhaeoP54_02565 39af53dd1a3240e2b483edc7e9c3a447 292 SUPERFAMILY SSF88659 190 282 1.1E-16 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like PhaeoP54_01842 7f41c82c97409e7df2f893c5ff86d09d 180 Gene3D G3DSA:3.40.50.450 1 179 2.4E-67 T 14-10-2018 PhaeoP54_01842 7f41c82c97409e7df2f893c5ff86d09d 180 Pfam PF03641 Possible lysine decarboxylase 48 177 3.8E-37 T 14-10-2018 IPR031100 LOG family PhaeoP54_01842 7f41c82c97409e7df2f893c5ff86d09d 180 TIGRFAM TIGR00730 TIGR00730: TIGR00730 family protein 5 178 1.3E-55 T 14-10-2018 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG PhaeoP54_01842 7f41c82c97409e7df2f893c5ff86d09d 180 SUPERFAMILY SSF102405 2 178 2.29E-59 T 14-10-2018 PhaeoP54_02783 8ed0b70bc7e34ad431c187df0ebecaa0 283 Gene3D G3DSA:3.40.50.10950 63 280 1.9E-70 T 14-10-2018 PhaeoP54_02783 8ed0b70bc7e34ad431c187df0ebecaa0 283 PIRSF PIRSF000428 1 283 3.5E-72 T 14-10-2018 IPR012147 Phosphate acetyl/butyryltransferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 PhaeoP54_02783 8ed0b70bc7e34ad431c187df0ebecaa0 283 SUPERFAMILY SSF53659 1 282 1.6E-56 T 14-10-2018 PhaeoP54_02783 8ed0b70bc7e34ad431c187df0ebecaa0 283 Pfam PF01515 Phosphate acetyl/butaryl transferase 57 280 7.8E-66 T 14-10-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 PhaeoP54_02783 8ed0b70bc7e34ad431c187df0ebecaa0 283 Gene3D G3DSA:3.40.50.10950 1 52 1.3E-6 T 14-10-2018 PhaeoP54_02783 8ed0b70bc7e34ad431c187df0ebecaa0 283 Gene3D G3DSA:3.40.50.10750 112 256 1.9E-70 T 14-10-2018 PhaeoP54_01564 d0f337132d34915749719446b18b50aa 492 Gene3D G3DSA:1.10.3720.10 248 490 3.8E-35 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_01564 d0f337132d34915749719446b18b50aa 492 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 197 487 8.7E-85 T 14-10-2018 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 PhaeoP54_01564 d0f337132d34915749719446b18b50aa 492 SUPERFAMILY SSF161098 216 479 1.83E-32 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_01564 d0f337132d34915749719446b18b50aa 492 Pfam PF12501 Phosphate ATP-binding cassette transporter 7 176 6.5E-51 T 14-10-2018 IPR022182 ABC transporter phosphate permease PstC, N-terminal domain GO:0006817 PhaeoP54_01564 d0f337132d34915749719446b18b50aa 492 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 272 488 7.8E-15 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PhaeoP54_00361 f99cd0adc49f0dc321b075d9d680fa66 512 Pfam PF13538 UvrD-like helicase C-terminal domain 419 477 6.2E-21 T 14-10-2018 IPR027785 UvrD-like helicase C-terminal domain PhaeoP54_00361 f99cd0adc49f0dc321b075d9d680fa66 512 Gene3D G3DSA:3.40.50.300 2 267 3.0E-24 T 14-10-2018 PhaeoP54_00361 f99cd0adc49f0dc321b075d9d680fa66 512 Gene3D G3DSA:3.40.50.300 404 485 8.6E-11 T 14-10-2018 PhaeoP54_00361 f99cd0adc49f0dc321b075d9d680fa66 512 SUPERFAMILY SSF52540 42 477 6.51E-35 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_00361 f99cd0adc49f0dc321b075d9d680fa66 512 SMART SM00382 41 283 5.8E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_00361 f99cd0adc49f0dc321b075d9d680fa66 512 Pfam PF13604 AAA domain 44 274 6.8E-23 T 14-10-2018 PhaeoP54_03155 e0f54fdd496afa4fb2edb336f9cc79b7 539 Pfam PF01494 FAD binding domain 27 364 2.6E-59 T 14-10-2018 IPR002938 FAD-binding domain GO:0071949 PhaeoP54_03155 e0f54fdd496afa4fb2edb336f9cc79b7 539 Gene3D G3DSA:3.30.70.2450 208 293 1.1E-88 T 14-10-2018 PhaeoP54_03155 e0f54fdd496afa4fb2edb336f9cc79b7 539 Gene3D G3DSA:3.50.50.60 28 363 1.1E-88 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PhaeoP54_03155 e0f54fdd496afa4fb2edb336f9cc79b7 539 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 27 49 7.7E-35 T 14-10-2018 PhaeoP54_03155 e0f54fdd496afa4fb2edb336f9cc79b7 539 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 304 319 7.7E-35 T 14-10-2018 PhaeoP54_03155 e0f54fdd496afa4fb2edb336f9cc79b7 539 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 179 194 7.7E-35 T 14-10-2018 PhaeoP54_03155 e0f54fdd496afa4fb2edb336f9cc79b7 539 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 319 335 7.7E-35 T 14-10-2018 PhaeoP54_03155 e0f54fdd496afa4fb2edb336f9cc79b7 539 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 337 355 7.7E-35 T 14-10-2018 PhaeoP54_03155 e0f54fdd496afa4fb2edb336f9cc79b7 539 SUPERFAMILY SSF51905 27 402 9.07E-59 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PhaeoP54_03155 e0f54fdd496afa4fb2edb336f9cc79b7 539 Gene3D G3DSA:3.40.30.120 415 535 3.9E-8 T 14-10-2018 PhaeoP54_03152 20d1f94c9084ead0aea2e8beff02de1a 453 Pfam PF04209 homogentisate 1,2-dioxygenase 23 446 1.2E-196 T 14-10-2018 IPR005708 Homogentisate 1,2-dioxygenase GO:0004411|GO:0006559|GO:0006570|GO:0055114 KEGG: 00350+1.13.11.5|KEGG: 00643+1.13.11.5|Reactome: R-HSA-71182 PhaeoP54_03152 20d1f94c9084ead0aea2e8beff02de1a 453 Gene3D G3DSA:2.60.120.10 282 417 1.7E-58 T 14-10-2018 IPR014710 RmlC-like jelly roll fold PhaeoP54_03152 20d1f94c9084ead0aea2e8beff02de1a 453 SUPERFAMILY SSF51182 21 448 1.97E-158 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily PhaeoP54_03152 20d1f94c9084ead0aea2e8beff02de1a 453 TIGRFAM TIGR01015 hmgA: homogentisate 1,2-dioxygenase 22 446 6.9E-196 T 14-10-2018 IPR005708 Homogentisate 1,2-dioxygenase GO:0004411|GO:0006559|GO:0006570|GO:0055114 KEGG: 00350+1.13.11.5|KEGG: 00643+1.13.11.5|Reactome: R-HSA-71182 PhaeoP54_03716 1cf012226691bb85dcad16440cea31b4 254 SMART SM01134 74 235 1.1E-37 T 14-10-2018 PhaeoP54_03716 1cf012226691bb85dcad16440cea31b4 254 SMART SM00420 8 60 4.4E-6 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 PhaeoP54_03716 1cf012226691bb85dcad16440cea31b4 254 Gene3D G3DSA:1.10.10.10 2 70 1.9E-6 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_03716 1cf012226691bb85dcad16440cea31b4 254 Gene3D G3DSA:3.30.750.70 73 140 2.1E-6 T 14-10-2018 PhaeoP54_03716 1cf012226691bb85dcad16440cea31b4 254 SUPERFAMILY SSF46785 5 69 9.43E-9 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_03716 1cf012226691bb85dcad16440cea31b4 254 ProSitePatterns PS00894 DeoR-type HTH domain signature. 8 42 - T 14-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 PhaeoP54_03716 1cf012226691bb85dcad16440cea31b4 254 SUPERFAMILY SSF100950 77 233 2.81E-22 T 14-10-2018 IPR037171 NagB/RpiA transferase-like PhaeoP54_03716 1cf012226691bb85dcad16440cea31b4 254 Pfam PF00455 DeoR C terminal sensor domain 77 233 6.6E-34 T 14-10-2018 IPR014036 DeoR C-terminal sensor domain PhaeoP54_03716 1cf012226691bb85dcad16440cea31b4 254 Pfam PF08220 DeoR-like helix-turn-helix domain 8 61 2.6E-9 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 PhaeoP54_03878 e6d9d10ec3a53ed00529b11dccc3791e 200 Gene3D G3DSA:3.40.30.10 37 200 4.2E-47 T 14-10-2018 PhaeoP54_03878 e6d9d10ec3a53ed00529b11dccc3791e 200 SUPERFAMILY SSF52833 43 199 1.92E-46 T 14-10-2018 IPR036249 Thioredoxin-like superfamily PhaeoP54_03878 e6d9d10ec3a53ed00529b11dccc3791e 200 Pfam PF02630 SCO1/SenC 21 177 9.2E-36 T 14-10-2018 IPR003782 Copper chaperone SCO1/SenC Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PhaeoP54_02401 c42fc0290dd3d3ae9a11b39544e22937 321 Gene3D G3DSA:2.70.70.10 36 194 5.8E-33 T 14-10-2018 IPR011055 Duplicated hybrid motif PhaeoP54_02401 c42fc0290dd3d3ae9a11b39544e22937 321 SUPERFAMILY SSF51261 58 180 3.14E-26 T 14-10-2018 IPR011055 Duplicated hybrid motif PhaeoP54_02401 c42fc0290dd3d3ae9a11b39544e22937 321 Pfam PF01551 Peptidase family M23 61 179 1.7E-21 T 14-10-2018 IPR016047 Peptidase M23 PhaeoP54_02758 e4acb526fcf41e542d34f2f080412972 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 3.5E-18 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PhaeoP54_02758 e4acb526fcf41e542d34f2f080412972 294 Gene3D G3DSA:3.40.190.290 92 269 4.4E-11 T 14-10-2018 PhaeoP54_02758 e4acb526fcf41e542d34f2f080412972 294 SUPERFAMILY SSF53850 84 276 2.79E-22 T 14-10-2018 PhaeoP54_02758 e4acb526fcf41e542d34f2f080412972 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.1E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PhaeoP54_02758 e4acb526fcf41e542d34f2f080412972 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.1E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PhaeoP54_02758 e4acb526fcf41e542d34f2f080412972 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.1E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PhaeoP54_02758 e4acb526fcf41e542d34f2f080412972 294 SUPERFAMILY SSF46785 1 85 1.7E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_02758 e4acb526fcf41e542d34f2f080412972 294 Pfam PF03466 LysR substrate binding domain 88 276 5.4E-20 T 14-10-2018 IPR005119 LysR, substrate-binding PhaeoP54_02758 e4acb526fcf41e542d34f2f080412972 294 Gene3D G3DSA:1.10.10.10 1 90 4.1E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_03738 f1e5a87babe101e59fcb0f370a6a2e8c 75 TIGRFAM TIGR03980 prismane_assoc: hybrid cluster protein-associated redox disulfide domain 8 63 5.3E-21 T 14-10-2018 IPR023883 Conserved hypothetical protein CHP03980, redox-disulphide PhaeoP54_03738 f1e5a87babe101e59fcb0f370a6a2e8c 75 Gene3D G3DSA:1.10.3910.10 8 73 8.2E-15 T 14-10-2018 IPR038062 ScdA-like, N-terminal domain superfamily PhaeoP54_03738 f1e5a87babe101e59fcb0f370a6a2e8c 75 SUPERFAMILY SSF140683 10 68 2.22E-8 T 14-10-2018 IPR038062 ScdA-like, N-terminal domain superfamily PhaeoP54_03968 5478ce829cb6da3732a8b32ae7a5f3fa 165 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 93 164 1.6E-20 T 14-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 PhaeoP54_03968 5478ce829cb6da3732a8b32ae7a5f3fa 165 Gene3D G3DSA:3.10.50.30 87 165 6.8E-22 T 14-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 PhaeoP54_03968 5478ce829cb6da3732a8b32ae7a5f3fa 165 SUPERFAMILY SSF54534 90 164 1.7E-17 T 14-10-2018 PhaeoP54_03796 2711e5ad01c0b83d23d75cca81183247 759 Gene3D G3DSA:3.40.50.12740 483 626 4.0E-27 T 14-10-2018 PhaeoP54_03796 2711e5ad01c0b83d23d75cca81183247 759 Gene3D G3DSA:3.40.50.12740 628 751 4.7E-41 T 14-10-2018 PhaeoP54_03796 2711e5ad01c0b83d23d75cca81183247 759 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 351 465 1.1E-29 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PhaeoP54_03796 2711e5ad01c0b83d23d75cca81183247 759 Pfam PF00512 His Kinase A (phospho-acceptor) domain 239 304 3.0E-19 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PhaeoP54_03796 2711e5ad01c0b83d23d75cca81183247 759 SUPERFAMILY SSF55874 293 467 2.49E-48 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PhaeoP54_03796 2711e5ad01c0b83d23d75cca81183247 759 SMART SM00448 483 601 5.8E-15 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PhaeoP54_03796 2711e5ad01c0b83d23d75cca81183247 759 SMART SM00448 629 745 2.3E-36 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PhaeoP54_03796 2711e5ad01c0b83d23d75cca81183247 759 SUPERFAMILY SSF47384 224 306 1.33E-21 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 PhaeoP54_03796 2711e5ad01c0b83d23d75cca81183247 759 SMART SM00388 239 304 1.4E-24 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PhaeoP54_03796 2711e5ad01c0b83d23d75cca81183247 759 SMART SM00387 351 466 7.8E-37 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PhaeoP54_03796 2711e5ad01c0b83d23d75cca81183247 759 SUPERFAMILY SSF52172 479 606 2.42E-28 T 14-10-2018 IPR011006 CheY-like superfamily PhaeoP54_03796 2711e5ad01c0b83d23d75cca81183247 759 SUPERFAMILY SSF52172 628 749 8.82E-37 T 14-10-2018 IPR011006 CheY-like superfamily PhaeoP54_03796 2711e5ad01c0b83d23d75cca81183247 759 Gene3D G3DSA:3.30.565.10 303 469 1.3E-54 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PhaeoP54_03796 2711e5ad01c0b83d23d75cca81183247 759 Gene3D G3DSA:1.10.287.130 212 302 6.6E-30 T 14-10-2018 PhaeoP54_03796 2711e5ad01c0b83d23d75cca81183247 759 PRINTS PR00344 Bacterial sensor protein C-terminal signature 409 419 5.4E-18 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PhaeoP54_03796 2711e5ad01c0b83d23d75cca81183247 759 PRINTS PR00344 Bacterial sensor protein C-terminal signature 391 405 5.4E-18 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PhaeoP54_03796 2711e5ad01c0b83d23d75cca81183247 759 PRINTS PR00344 Bacterial sensor protein C-terminal signature 450 463 5.4E-18 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PhaeoP54_03796 2711e5ad01c0b83d23d75cca81183247 759 PRINTS PR00344 Bacterial sensor protein C-terminal signature 426 444 5.4E-18 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PhaeoP54_03796 2711e5ad01c0b83d23d75cca81183247 759 Pfam PF00072 Response regulator receiver domain 486 599 2.5E-15 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PhaeoP54_03796 2711e5ad01c0b83d23d75cca81183247 759 Pfam PF00072 Response regulator receiver domain 632 745 2.4E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PhaeoP54_01561 f192d20d8bfcc14b761b6ea75a9c47e6 236 Gene3D G3DSA:1.20.58.220 120 232 4.8E-36 T 14-10-2018 IPR038078 PhoU-like domain superfamily PhaeoP54_01561 f192d20d8bfcc14b761b6ea75a9c47e6 236 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 9 217 5.7E-69 T 14-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 PhaeoP54_01561 f192d20d8bfcc14b761b6ea75a9c47e6 236 PIRSF PIRSF003107 3 223 2.4E-65 T 14-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 PhaeoP54_01561 f192d20d8bfcc14b761b6ea75a9c47e6 236 Gene3D G3DSA:1.20.58.220 1 119 4.4E-38 T 14-10-2018 IPR038078 PhoU-like domain superfamily PhaeoP54_01561 f192d20d8bfcc14b761b6ea75a9c47e6 236 SUPERFAMILY SSF109755 8 225 1.26E-69 T 14-10-2018 PhaeoP54_01561 f192d20d8bfcc14b761b6ea75a9c47e6 236 Pfam PF01895 PhoU domain 21 109 9.2E-23 T 14-10-2018 IPR026022 PhoU domain PhaeoP54_01561 f192d20d8bfcc14b761b6ea75a9c47e6 236 Pfam PF01895 PhoU domain 126 210 6.5E-21 T 14-10-2018 IPR026022 PhoU domain PhaeoP54_03345 95537712747902bcbc55ab48d55c02c5 148 Gene3D G3DSA:1.10.10.10 14 147 1.4E-30 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_03345 95537712747902bcbc55ab48d55c02c5 148 Pfam PF01047 MarR family 40 97 1.8E-14 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PhaeoP54_03345 95537712747902bcbc55ab48d55c02c5 148 SUPERFAMILY SSF46785 4 141 1.5E-30 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_03345 95537712747902bcbc55ab48d55c02c5 148 SMART SM00347 33 131 3.2E-17 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PhaeoP54_00430 76df00b66fde089989f68dd61251e739 400 SUPERFAMILY SSF56219 3 395 1.56E-28 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily PhaeoP54_00430 76df00b66fde089989f68dd61251e739 400 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 39 261 5.4E-8 T 14-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase PhaeoP54_02663 bc27a91250a34d293c7cd50d1e6483b9 451 Pfam PF02954 Bacterial regulatory protein, Fis family 414 445 5.3E-9 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PhaeoP54_02663 bc27a91250a34d293c7cd50d1e6483b9 451 SUPERFAMILY SSF52540 161 387 1.62E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_02663 bc27a91250a34d293c7cd50d1e6483b9 451 Gene3D G3DSA:3.40.50.2300 17 150 1.4E-29 T 14-10-2018 PhaeoP54_02663 bc27a91250a34d293c7cd50d1e6483b9 451 Gene3D G3DSA:1.10.8.60 328 391 4.8E-19 T 14-10-2018 PhaeoP54_02663 bc27a91250a34d293c7cd50d1e6483b9 451 Pfam PF00158 Sigma-54 interaction domain 161 324 2.6E-51 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 PhaeoP54_02663 bc27a91250a34d293c7cd50d1e6483b9 451 SUPERFAMILY SSF46689 404 451 8.07E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PhaeoP54_02663 bc27a91250a34d293c7cd50d1e6483b9 451 Gene3D G3DSA:3.40.50.300 151 327 6.5E-54 T 14-10-2018 PhaeoP54_02663 bc27a91250a34d293c7cd50d1e6483b9 451 Gene3D G3DSA:1.10.10.60 399 448 1.7E-10 T 14-10-2018 PhaeoP54_02663 bc27a91250a34d293c7cd50d1e6483b9 451 SUPERFAMILY SSF52172 18 205 2.42E-37 T 14-10-2018 IPR011006 CheY-like superfamily PhaeoP54_02663 bc27a91250a34d293c7cd50d1e6483b9 451 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 415 432 2.1E-6 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PhaeoP54_02663 bc27a91250a34d293c7cd50d1e6483b9 451 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 432 451 2.1E-6 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PhaeoP54_02663 bc27a91250a34d293c7cd50d1e6483b9 451 SMART SM00448 19 130 3.6E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PhaeoP54_02663 bc27a91250a34d293c7cd50d1e6483b9 451 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 243 258 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 PhaeoP54_02663 bc27a91250a34d293c7cd50d1e6483b9 451 SMART SM00382 181 320 7.4E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_02663 bc27a91250a34d293c7cd50d1e6483b9 451 Pfam PF00072 Response regulator receiver domain 21 130 3.6E-21 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PhaeoP54_02663 bc27a91250a34d293c7cd50d1e6483b9 451 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 370 379 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site PhaeoP54_01802 c5c472847bbdc7e66afc79deb0f2c91e 443 Pfam PF05697 Bacterial trigger factor protein (TF) 1 146 3.9E-32 T 14-10-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 PhaeoP54_01802 c5c472847bbdc7e66afc79deb0f2c91e 443 TIGRFAM TIGR00115 tig: trigger factor 11 417 5.7E-122 T 14-10-2018 IPR005215 Trigger factor GO:0015031 PhaeoP54_01802 c5c472847bbdc7e66afc79deb0f2c91e 443 PIRSF PIRSF003095 1 439 1.0E-119 T 14-10-2018 IPR005215 Trigger factor GO:0015031 PhaeoP54_01802 c5c472847bbdc7e66afc79deb0f2c91e 443 SUPERFAMILY SSF54534 101 245 8.84E-35 T 14-10-2018 PhaeoP54_01802 c5c472847bbdc7e66afc79deb0f2c91e 443 Hamap MF_00303 Trigger factor [tig]. 1 424 20.214 T 14-10-2018 IPR005215 Trigger factor GO:0015031 PhaeoP54_01802 c5c472847bbdc7e66afc79deb0f2c91e 443 SUPERFAMILY SSF102735 1 132 4.05E-34 T 14-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 PhaeoP54_01802 c5c472847bbdc7e66afc79deb0f2c91e 443 Gene3D G3DSA:3.30.70.1050 1 117 3.3E-30 T 14-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 PhaeoP54_01802 c5c472847bbdc7e66afc79deb0f2c91e 443 Gene3D G3DSA:1.10.3120.10 118 423 3.1E-86 T 14-10-2018 IPR037041 Trigger factor, C-terminal domain superfamily GO:0006457|GO:0015031 PhaeoP54_01802 c5c472847bbdc7e66afc79deb0f2c91e 443 Gene3D G3DSA:3.10.50.40 152 250 3.1E-86 T 14-10-2018 PhaeoP54_01802 c5c472847bbdc7e66afc79deb0f2c91e 443 SUPERFAMILY SSF109998 252 433 2.94E-44 T 14-10-2018 IPR027304 Trigger factor/SurA domain superfamily PhaeoP54_01802 c5c472847bbdc7e66afc79deb0f2c91e 443 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 265 419 2.3E-35 T 14-10-2018 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 PhaeoP54_01802 c5c472847bbdc7e66afc79deb0f2c91e 443 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 162 233 8.1E-16 T 14-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain PhaeoP54_02161 a7b30e5f6274c58daa01c24d45e959c5 434 SUPERFAMILY SSF56563 133 429 1.57E-38 T 14-10-2018 PhaeoP54_02161 a7b30e5f6274c58daa01c24d45e959c5 434 Pfam PF05065 Phage capsid family 141 428 1.8E-41 T 14-10-2018 IPR024455 Phage capsid PhaeoP54_02161 a7b30e5f6274c58daa01c24d45e959c5 434 TIGRFAM TIGR01554 major_cap_HK97: phage major capsid protein, HK97 family 18 427 5.0E-48 T 14-10-2018 IPR024455 Phage capsid PhaeoP54_02161 a7b30e5f6274c58daa01c24d45e959c5 434 Gene3D G3DSA:3.30.2400.10 187 269 4.6E-6 T 14-10-2018 PhaeoP54_02161 a7b30e5f6274c58daa01c24d45e959c5 434 Gene3D G3DSA:3.30.2320.10 270 363 4.6E-6 T 14-10-2018 PhaeoP54_01391 5ccaf0c415cd41f97adcdd9f18c51a39 735 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 574 603 2.3E-32 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 PhaeoP54_01391 5ccaf0c415cd41f97adcdd9f18c51a39 735 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 622 651 2.3E-32 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 PhaeoP54_01391 5ccaf0c415cd41f97adcdd9f18c51a39 735 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 468 497 2.3E-32 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 PhaeoP54_01391 5ccaf0c415cd41f97adcdd9f18c51a39 735 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 545 572 2.3E-32 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 PhaeoP54_01391 5ccaf0c415cd41f97adcdd9f18c51a39 735 SUPERFAMILY SSF58104 418 695 1.29E-60 T 14-10-2018 PhaeoP54_01391 5ccaf0c415cd41f97adcdd9f18c51a39 735 SMART SM00283 447 694 2.5E-76 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 PhaeoP54_01391 5ccaf0c415cd41f97adcdd9f18c51a39 735 Pfam PF08376 Nitrate and nitrite sensing 57 293 2.2E-31 T 14-10-2018 IPR013587 Nitrate/nitrite sensing protein PhaeoP54_01391 5ccaf0c415cd41f97adcdd9f18c51a39 735 Gene3D G3DSA:1.20.1480.50 301 389 6.6E-10 T 14-10-2018 PhaeoP54_01391 5ccaf0c415cd41f97adcdd9f18c51a39 735 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 508 662 2.3E-40 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 PhaeoP54_01391 5ccaf0c415cd41f97adcdd9f18c51a39 735 Gene3D G3DSA:1.10.287.950 417 696 7.9E-69 T 14-10-2018 PhaeoP54_04076 8140bf2a9a5713a7d0f8ee312f996f6a 270 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 240 252 1.5E-8 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PhaeoP54_04076 8140bf2a9a5713a7d0f8ee312f996f6a 270 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 210 224 1.5E-8 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PhaeoP54_04076 8140bf2a9a5713a7d0f8ee312f996f6a 270 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 224 240 1.5E-8 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PhaeoP54_04076 8140bf2a9a5713a7d0f8ee312f996f6a 270 SMART SM00421 207 264 6.1E-19 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PhaeoP54_04076 8140bf2a9a5713a7d0f8ee312f996f6a 270 SUPERFAMILY SSF52172 2 120 8.95E-6 T 14-10-2018 IPR011006 CheY-like superfamily PhaeoP54_04076 8140bf2a9a5713a7d0f8ee312f996f6a 270 SUPERFAMILY SSF46894 197 266 2.31E-16 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PhaeoP54_04076 8140bf2a9a5713a7d0f8ee312f996f6a 270 Pfam PF00196 Bacterial regulatory proteins, luxR family 210 264 6.0E-17 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PhaeoP54_02099 825644c5f11708475e576203338c5ee9 264 SUPERFAMILY SSF56655 7 262 6.54E-68 T 14-10-2018 PhaeoP54_02099 825644c5f11708475e576203338c5ee9 264 Gene3D G3DSA:3.30.540.10 4 141 4.4E-35 T 14-10-2018 PhaeoP54_02099 825644c5f11708475e576203338c5ee9 264 PRINTS PR00377 Inositol monophosphatase superfamily signature 211 235 4.0E-19 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 PhaeoP54_02099 825644c5f11708475e576203338c5ee9 264 PRINTS PR00377 Inositol monophosphatase superfamily signature 43 63 4.0E-19 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 PhaeoP54_02099 825644c5f11708475e576203338c5ee9 264 PRINTS PR00377 Inositol monophosphatase superfamily signature 85 101 4.0E-19 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 PhaeoP54_02099 825644c5f11708475e576203338c5ee9 264 PRINTS PR00377 Inositol monophosphatase superfamily signature 65 81 4.0E-19 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 PhaeoP54_02099 825644c5f11708475e576203338c5ee9 264 Pfam PF00459 Inositol monophosphatase family 9 262 2.9E-48 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 PhaeoP54_02099 825644c5f11708475e576203338c5ee9 264 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 85 98 - T 14-10-2018 IPR020583 Inositol monophosphatase, metal-binding site PhaeoP54_02099 825644c5f11708475e576203338c5ee9 264 Gene3D G3DSA:3.40.190.80 148 261 1.7E-30 T 14-10-2018 PhaeoP54_02099 825644c5f11708475e576203338c5ee9 264 TIGRFAM TIGR02067 his_9_HisN: histidinol-phosphatase 9 260 8.8E-88 T 14-10-2018 IPR011809 Histidinol-phosphate phosphatase, putative, inositol monophosphatase GO:0004401 KEGG: 00340+3.1.3.15 PhaeoP54_00415 0be2619e5db103ac71054a831363a7c7 342 Gene3D G3DSA:1.10.3720.10 97 339 3.7E-13 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_00415 0be2619e5db103ac71054a831363a7c7 342 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 131 337 7.9E-26 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PhaeoP54_00415 0be2619e5db103ac71054a831363a7c7 342 SUPERFAMILY SSF161098 110 319 3.05E-12 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_00415 0be2619e5db103ac71054a831363a7c7 342 PRINTS PR00342 Rhesus blood group protein signature 10 28 5.1E-5 T 14-10-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 PhaeoP54_00415 0be2619e5db103ac71054a831363a7c7 342 PRINTS PR00342 Rhesus blood group protein signature 108 124 5.1E-5 T 14-10-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 PhaeoP54_00415 0be2619e5db103ac71054a831363a7c7 342 PRINTS PR00342 Rhesus blood group protein signature 314 330 5.1E-5 T 14-10-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 PhaeoP54_00415 0be2619e5db103ac71054a831363a7c7 342 PRINTS PR00342 Rhesus blood group protein signature 169 184 5.1E-5 T 14-10-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 PhaeoP54_00239 edc340ff28c876461b74ef19edbdb5b4 461 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 140 155 0.21 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_00239 edc340ff28c876461b74ef19edbdb5b4 461 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 94 110 0.065 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_00239 edc340ff28c876461b74ef19edbdb5b4 461 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 288 299 0.53 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_00239 edc340ff28c876461b74ef19edbdb5b4 461 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 120 136 0.017 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_00239 edc340ff28c876461b74ef19edbdb5b4 461 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 221 230 59.0 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_00239 edc340ff28c876461b74ef19edbdb5b4 461 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 257 273 0.013 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_00239 edc340ff28c876461b74ef19edbdb5b4 461 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 239 255 2.6 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_00239 edc340ff28c876461b74ef19edbdb5b4 461 PRINTS PR00313 NodO calcium binding signature 91 102 7.9E-8 T 14-10-2018 PhaeoP54_00239 edc340ff28c876461b74ef19edbdb5b4 461 PRINTS PR00313 NodO calcium binding signature 292 301 7.9E-8 T 14-10-2018 PhaeoP54_00239 edc340ff28c876461b74ef19edbdb5b4 461 PRINTS PR00313 NodO calcium binding signature 112 120 7.9E-8 T 14-10-2018 PhaeoP54_00239 edc340ff28c876461b74ef19edbdb5b4 461 PRINTS PR00313 NodO calcium binding signature 266 274 7.9E-8 T 14-10-2018 PhaeoP54_00239 edc340ff28c876461b74ef19edbdb5b4 461 Gene3D G3DSA:2.150.10.10 215 343 7.5E-9 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal PhaeoP54_00239 edc340ff28c876461b74ef19edbdb5b4 461 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 117 135 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site PhaeoP54_00239 edc340ff28c876461b74ef19edbdb5b4 461 Gene3D G3DSA:2.150.10.10 89 213 8.3E-14 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal PhaeoP54_00239 edc340ff28c876461b74ef19edbdb5b4 461 SUPERFAMILY SSF51120 34 208 4.06E-13 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal PhaeoP54_00239 edc340ff28c876461b74ef19edbdb5b4 461 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 253 271 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site PhaeoP54_00239 edc340ff28c876461b74ef19edbdb5b4 461 SUPERFAMILY SSF51120 193 324 5.76E-13 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal PhaeoP54_01978 76edf6e474e0b13e0b339608cd90885e 409 Pfam PF14532 Sigma-54 interaction domain 145 284 3.7E-16 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 PhaeoP54_01978 76edf6e474e0b13e0b339608cd90885e 409 SUPERFAMILY SSF46689 325 402 8.6E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PhaeoP54_01978 76edf6e474e0b13e0b339608cd90885e 409 Gene3D G3DSA:3.40.50.2300 1 138 3.8E-32 T 14-10-2018 PhaeoP54_01978 76edf6e474e0b13e0b339608cd90885e 409 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 366 383 3.1E-6 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PhaeoP54_01978 76edf6e474e0b13e0b339608cd90885e 409 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 383 403 3.1E-6 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PhaeoP54_01978 76edf6e474e0b13e0b339608cd90885e 409 Pfam PF02954 Bacterial regulatory protein, Fis family 360 400 2.3E-9 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PhaeoP54_01978 76edf6e474e0b13e0b339608cd90885e 409 SUPERFAMILY SSF52172 4 186 1.27E-35 T 14-10-2018 IPR011006 CheY-like superfamily PhaeoP54_01978 76edf6e474e0b13e0b339608cd90885e 409 Gene3D G3DSA:1.10.8.60 285 346 1.6E-10 T 14-10-2018 PhaeoP54_01978 76edf6e474e0b13e0b339608cd90885e 409 SMART SM00448 3 114 4.9E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PhaeoP54_01978 76edf6e474e0b13e0b339608cd90885e 409 SUPERFAMILY SSF52540 144 342 2.17E-30 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_01978 76edf6e474e0b13e0b339608cd90885e 409 Gene3D G3DSA:1.10.10.60 347 407 2.9E-12 T 14-10-2018 PhaeoP54_01978 76edf6e474e0b13e0b339608cd90885e 409 Gene3D G3DSA:3.40.50.300 143 284 4.4E-30 T 14-10-2018 PhaeoP54_01978 76edf6e474e0b13e0b339608cd90885e 409 Pfam PF00072 Response regulator receiver domain 5 114 2.5E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PhaeoP54_00126 f1e40ee27af3d7c78b2eac6392808cea 258 SUPERFAMILY SSF52540 4 246 1.41E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_00126 f1e40ee27af3d7c78b2eac6392808cea 258 Pfam PF00005 ABC transporter 22 177 6.4E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PhaeoP54_00126 f1e40ee27af3d7c78b2eac6392808cea 258 SMART SM00382 30 226 5.7E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_00126 f1e40ee27af3d7c78b2eac6392808cea 258 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 229 248 1.3E-4 T 14-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal PhaeoP54_00126 f1e40ee27af3d7c78b2eac6392808cea 258 Gene3D G3DSA:3.40.50.300 3 249 1.2E-58 T 14-10-2018 PhaeoP54_00126 f1e40ee27af3d7c78b2eac6392808cea 258 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PhaeoP54_00246 7d4ceba6cf2e03b79e5b1b9f56543cd2 333 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 62 280 1.6E-5 T 14-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase PhaeoP54_00246 7d4ceba6cf2e03b79e5b1b9f56543cd2 333 Gene3D G3DSA:3.60.10.10 56 333 6.5E-34 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily PhaeoP54_00246 7d4ceba6cf2e03b79e5b1b9f56543cd2 333 SUPERFAMILY SSF56219 57 330 6.67E-26 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily PhaeoP54_03450 d51de3c8aebcb29fe588da42ca135830 151 Pfam PF03653 Uncharacterised protein family (UPF0093) 8 150 8.6E-55 T 14-10-2018 IPR005265 Uncharacterised protein family UPF0093 PhaeoP54_03450 d51de3c8aebcb29fe588da42ca135830 151 PIRSF PIRSF004638 4 151 1.4E-49 T 14-10-2018 IPR005265 Uncharacterised protein family UPF0093 PhaeoP54_02390 397b0ad55e3fe512ef552500800948a1 339 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 8 129 3.6E-44 T 14-10-2018 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 PhaeoP54_02390 397b0ad55e3fe512ef552500800948a1 339 Pfam PF14572 Phosphoribosyl synthetase-associated domain 211 323 1.2E-20 T 14-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 PhaeoP54_02390 397b0ad55e3fe512ef552500800948a1 339 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 137 152 - T 14-10-2018 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 PhaeoP54_02390 397b0ad55e3fe512ef552500800948a1 339 SUPERFAMILY SSF53271 78 290 2.5E-61 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like PhaeoP54_02390 397b0ad55e3fe512ef552500800948a1 339 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 9 324 2.2E-107 T 14-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 PhaeoP54_02390 397b0ad55e3fe512ef552500800948a1 339 Gene3D G3DSA:3.40.50.2020 10 310 2.7E-113 T 14-10-2018 PhaeoP54_02390 397b0ad55e3fe512ef552500800948a1 339 SMART SM01400 7 129 4.3E-68 T 14-10-2018 PhaeoP54_02390 397b0ad55e3fe512ef552500800948a1 339 Gene3D G3DSA:3.40.50.2020 156 300 2.7E-113 T 14-10-2018 PhaeoP54_02390 397b0ad55e3fe512ef552500800948a1 339 Hamap MF_00583_B Putative ribose-phosphate pyrophosphokinase [prs]. 7 324 44.506 T 14-10-2018 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type GO:0004749 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 PhaeoP54_02114 9f89ee0ea604a2d5250db38dcc92a6bd 207 Pfam PF03352 Methyladenine glycosylase 16 187 3.7E-70 T 14-10-2018 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 PhaeoP54_02114 9f89ee0ea604a2d5250db38dcc92a6bd 207 SUPERFAMILY SSF48150 12 190 3.14E-72 T 14-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 PhaeoP54_02114 9f89ee0ea604a2d5250db38dcc92a6bd 207 Gene3D G3DSA:1.10.340.30 12 193 5.4E-74 T 14-10-2018 PhaeoP54_00555 8bc06889a22f7f6142b832572a6a512a 72 Pfam PF06568 Domain of unknown function (DUF1127) 27 62 5.3E-14 T 14-10-2018 IPR009506 Protein of unknown function DUF1127 PhaeoP54_03600 bb91606956b44c3388a570fd3c3369fd 362 Pfam PF00535 Glycosyl transferase family 2 28 199 3.7E-18 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 PhaeoP54_03600 bb91606956b44c3388a570fd3c3369fd 362 Gene3D G3DSA:3.90.550.10 14 243 3.7E-28 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PhaeoP54_03600 bb91606956b44c3388a570fd3c3369fd 362 SUPERFAMILY SSF53448 23 282 1.04E-38 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PhaeoP54_02690 8eb157024fc13e5b6078052f0399e1a9 386 Gene3D G3DSA:2.30.40.10 15 383 9.2E-108 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 PhaeoP54_02690 8eb157024fc13e5b6078052f0399e1a9 386 SUPERFAMILY SSF51556 61 355 8.85E-89 T 14-10-2018 IPR032466 Metal-dependent hydrolase PhaeoP54_02690 8eb157024fc13e5b6078052f0399e1a9 386 SUPERFAMILY SSF51338 9 60 1.14E-11 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 PhaeoP54_02690 8eb157024fc13e5b6078052f0399e1a9 386 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 10 376 6.6E-85 T 14-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 PhaeoP54_02690 8eb157024fc13e5b6078052f0399e1a9 386 Gene3D G3DSA:3.20.20.140 62 352 9.2E-108 T 14-10-2018 PhaeoP54_02690 8eb157024fc13e5b6078052f0399e1a9 386 PIRSF PIRSF038994 13 386 4.6E-94 T 14-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 PhaeoP54_02690 8eb157024fc13e5b6078052f0399e1a9 386 Pfam PF01979 Amidohydrolase family 57 370 1.1E-15 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 PhaeoP54_00037 a410f867dfc6d5d98f54eaac3e3a13b2 92 Pfam PF03050 Transposase IS66 family 1 72 2.3E-11 T 14-10-2018 IPR004291 Transposase, IS66 PhaeoP54_03587 52088c17c258a2be9e1d85de9cc19141 283 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 141 230 4.8E-23 T 14-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 PhaeoP54_03587 52088c17c258a2be9e1d85de9cc19141 283 SMART SM01232 141 233 1.2E-44 T 14-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 PhaeoP54_03587 52088c17c258a2be9e1d85de9cc19141 283 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 124 5.0E-36 T 14-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 PhaeoP54_03587 52088c17c258a2be9e1d85de9cc19141 283 SUPERFAMILY SSF46946 141 230 8.11E-29 T 14-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 PhaeoP54_03587 52088c17c258a2be9e1d85de9cc19141 283 SMART SM00898 2 125 1.4E-53 T 14-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 PhaeoP54_03587 52088c17c258a2be9e1d85de9cc19141 283 Gene3D G3DSA:1.10.8.50 143 283 6.7E-46 T 14-10-2018 PhaeoP54_03587 52088c17c258a2be9e1d85de9cc19141 283 SUPERFAMILY SSF57716 229 282 5.42E-14 T 14-10-2018 PhaeoP54_03587 52088c17c258a2be9e1d85de9cc19141 283 Pfam PF06827 Zinc finger found in FPG and IleRS 253 282 1.7E-5 T 14-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 PhaeoP54_03587 52088c17c258a2be9e1d85de9cc19141 283 SUPERFAMILY SSF81624 2 146 1.16E-37 T 14-10-2018 IPR035937 MutM-like, N-terminal PhaeoP54_03587 52088c17c258a2be9e1d85de9cc19141 283 ProSitePatterns PS01242 Zinc finger FPG-type signature. 256 282 - T 14-10-2018 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 PhaeoP54_03587 52088c17c258a2be9e1d85de9cc19141 283 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 283 43.493 T 14-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 PhaeoP54_03587 52088c17c258a2be9e1d85de9cc19141 283 Gene3D G3DSA:3.20.190.10 2 139 9.3E-40 T 14-10-2018 IPR035937 MutM-like, N-terminal PhaeoP54_03587 52088c17c258a2be9e1d85de9cc19141 283 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 282 7.1E-85 T 14-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 PhaeoP54_03140 4ca191d5d4f22b88740dab16598aed9b 119 Gene3D G3DSA:3.30.1320.10 1 119 1.6E-39 T 14-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PhaeoP54_03140 4ca191d5d4f22b88740dab16598aed9b 119 Pfam PF00886 Ribosomal protein S16 9 70 1.2E-27 T 14-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PhaeoP54_03140 4ca191d5d4f22b88740dab16598aed9b 119 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 2 80 25.55 T 14-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PhaeoP54_03140 4ca191d5d4f22b88740dab16598aed9b 119 TIGRFAM TIGR00002 S16: ribosomal protein bS16 3 82 2.0E-33 T 14-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PhaeoP54_03140 4ca191d5d4f22b88740dab16598aed9b 119 SUPERFAMILY SSF54565 3 87 1.16E-32 T 14-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PhaeoP54_01271 5e2950779764558e3f4a67fc45f0c896 415 Pfam PF13187 4Fe-4S dicluster domain 233 280 7.1E-7 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PhaeoP54_01271 5e2950779764558e3f4a67fc45f0c896 415 SUPERFAMILY SSF54862 232 291 3.27E-15 T 14-10-2018 PhaeoP54_01271 5e2950779764558e3f4a67fc45f0c896 415 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 234 245 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PhaeoP54_01271 5e2950779764558e3f4a67fc45f0c896 415 Gene3D G3DSA:3.30.70.20 230 302 1.2E-11 T 14-10-2018 PhaeoP54_02620 a7d57771ddf243e391aac213f655dfca 450 Pfam PF00120 Glutamine synthetase, catalytic domain 115 444 4.6E-99 T 14-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PhaeoP54_02620 a7d57771ddf243e391aac213f655dfca 450 Gene3D G3DSA:3.30.590.10 117 449 9.0E-100 T 14-10-2018 PhaeoP54_02620 a7d57771ddf243e391aac213f655dfca 450 SUPERFAMILY SSF55931 114 448 5.59E-106 T 14-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 PhaeoP54_02620 a7d57771ddf243e391aac213f655dfca 450 SUPERFAMILY SSF54368 4 110 4.05E-18 T 14-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PhaeoP54_02620 a7d57771ddf243e391aac213f655dfca 450 Gene3D G3DSA:3.10.20.70 4 112 3.1E-6 T 14-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PhaeoP54_02620 a7d57771ddf243e391aac213f655dfca 450 SMART SM01230 114 368 2.0E-103 T 14-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PhaeoP54_00059 b8b67a54a022cbb6e77a4ecdb437c305 271 Gene3D G3DSA:1.10.3720.10 54 262 2.6E-20 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_00059 b8b67a54a022cbb6e77a4ecdb437c305 271 SUPERFAMILY SSF161098 60 248 2.75E-22 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_00059 b8b67a54a022cbb6e77a4ecdb437c305 271 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 83 266 1.9E-28 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PhaeoP54_00079 a651fb2e1ff62b15c7df09a7cb05da55 254 Pfam PF03883 Peroxide stress protein YaaA 1 241 7.7E-84 T 14-10-2018 IPR005583 Peroxide stress protein YaaA PhaeoP54_00079 a651fb2e1ff62b15c7df09a7cb05da55 254 Hamap MF_00652 UPF0246 protein YaaA [yaaA]. 1 253 32.46 T 14-10-2018 IPR005583 Peroxide stress protein YaaA PhaeoP54_03492 92236e1572c6dfd93de2a5b4e4b5c88e 538 PIRSF PIRSF000137 2 538 5.4E-154 T 14-10-2018 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 PhaeoP54_03492 92236e1572c6dfd93de2a5b4e4b5c88e 538 Gene3D G3DSA:3.50.50.60 4 532 6.1E-180 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PhaeoP54_03492 92236e1572c6dfd93de2a5b4e4b5c88e 538 Gene3D G3DSA:3.30.560.10 42 472 6.1E-180 T 14-10-2018 PhaeoP54_03492 92236e1572c6dfd93de2a5b4e4b5c88e 538 Pfam PF05199 GMC oxidoreductase 392 527 9.4E-43 T 14-10-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 PhaeoP54_03492 92236e1572c6dfd93de2a5b4e4b5c88e 538 SUPERFAMILY SSF54373 295 477 2.16E-52 T 14-10-2018 PhaeoP54_03492 92236e1572c6dfd93de2a5b4e4b5c88e 538 ProSitePatterns PS00624 GMC oxidoreductases signature 2. 259 273 - T 14-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 PhaeoP54_03492 92236e1572c6dfd93de2a5b4e4b5c88e 538 SUPERFAMILY SSF51905 1 536 2.27E-87 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PhaeoP54_03492 92236e1572c6dfd93de2a5b4e4b5c88e 538 ProSitePatterns PS00623 GMC oxidoreductases signature 1. 82 105 - T 14-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 PhaeoP54_03492 92236e1572c6dfd93de2a5b4e4b5c88e 538 Pfam PF00732 GMC oxidoreductase 4 300 5.9E-86 T 14-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 PhaeoP54_02226 bb496a8c36da0684d59c420360447404 300 Pfam PF00892 EamA-like transporter family 162 296 1.1E-14 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 PhaeoP54_02226 bb496a8c36da0684d59c420360447404 300 Pfam PF00892 EamA-like transporter family 18 144 2.5E-6 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 PhaeoP54_02226 bb496a8c36da0684d59c420360447404 300 SUPERFAMILY SSF103481 196 299 4.84E-14 T 14-10-2018 PhaeoP54_02226 bb496a8c36da0684d59c420360447404 300 Gene3D G3DSA:1.10.3730.20 69 152 4.1E-5 T 14-10-2018 PhaeoP54_02226 bb496a8c36da0684d59c420360447404 300 SUPERFAMILY SSF103481 55 148 1.57E-14 T 14-10-2018 PhaeoP54_00003 41a9816a6b063da77600ede06f199249 365 SUPERFAMILY SSF52540 4 344 8.15E-36 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_00003 41a9816a6b063da77600ede06f199249 365 Pfam PF02463 RecF/RecN/SMC N terminal domain 4 348 2.2E-14 T 14-10-2018 IPR003395 RecF/RecN/SMC, N-terminal PhaeoP54_00003 41a9816a6b063da77600ede06f199249 365 ProSitePatterns PS00618 RecF protein signature 2. 302 320 - T 14-10-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 PhaeoP54_00003 41a9816a6b063da77600ede06f199249 365 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 365 80.555 T 14-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 PhaeoP54_00003 41a9816a6b063da77600ede06f199249 365 Gene3D G3DSA:3.40.50.300 7 336 6.1E-75 T 14-10-2018 PhaeoP54_00003 41a9816a6b063da77600ede06f199249 365 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 3 344 1.2E-48 T 14-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 PhaeoP54_00003 41a9816a6b063da77600ede06f199249 365 Gene3D G3DSA:1.20.1050.90 121 301 6.1E-75 T 14-10-2018 PhaeoP54_02344 225f42e91280ac0d121a50356a5c7fab 237 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 60 65 - T 14-10-2018 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 PhaeoP54_02344 225f42e91280ac0d121a50356a5c7fab 237 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 50 65 8.0E-6 T 14-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 PhaeoP54_02344 225f42e91280ac0d121a50356a5c7fab 237 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 115 129 8.0E-6 T 14-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 PhaeoP54_02344 225f42e91280ac0d121a50356a5c7fab 237 SMART SM00020 30 226 4.9E-4 T 14-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 PhaeoP54_02344 225f42e91280ac0d121a50356a5c7fab 237 Pfam PF00089 Trypsin 38 217 3.0E-17 T 14-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 PhaeoP54_02344 225f42e91280ac0d121a50356a5c7fab 237 Gene3D G3DSA:2.40.10.10 34 137 5.8E-24 T 14-10-2018 PhaeoP54_02344 225f42e91280ac0d121a50356a5c7fab 237 SUPERFAMILY SSF50494 1 233 1.38E-26 T 14-10-2018 IPR009003 Peptidase S1, PA clan PhaeoP54_02344 225f42e91280ac0d121a50356a5c7fab 237 Gene3D G3DSA:2.40.10.10 138 195 5.8E-24 T 14-10-2018 PhaeoP54_01004 b22af2864490f010bb1437620ac62c5f 283 Gene3D G3DSA:3.20.20.70 1 283 2.0E-121 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PhaeoP54_01004 b22af2864490f010bb1437620ac62c5f 283 Pfam PF00682 HMGL-like 5 276 1.1E-44 T 14-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 PhaeoP54_01004 b22af2864490f010bb1437620ac62c5f 283 SUPERFAMILY SSF51569 1 282 2.05E-64 T 14-10-2018 PhaeoP54_02081 34b385268637ce754d4b24560009b4bc 502 ProSitePatterns PS00149 Sulfatases signature 2. 92 102 - T 14-10-2018 IPR024607 Sulfatase, conserved site PhaeoP54_02081 34b385268637ce754d4b24560009b4bc 502 Pfam PF00884 Sulfatase 4 345 1.1E-46 T 14-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 PhaeoP54_02081 34b385268637ce754d4b24560009b4bc 502 TIGRFAM TIGR03417 chol_sulfatase: choline-sulfatase 3 499 2.5E-269 T 14-10-2018 IPR017785 Choline-sulfatase PhaeoP54_02081 34b385268637ce754d4b24560009b4bc 502 SUPERFAMILY SSF53649 4 438 7.66E-108 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 PhaeoP54_02081 34b385268637ce754d4b24560009b4bc 502 Pfam PF12411 Choline sulfatase enzyme C terminal 447 498 9.6E-23 T 14-10-2018 IPR025863 Choline sulfatase enzyme C-terminal domain PhaeoP54_02081 34b385268637ce754d4b24560009b4bc 502 Gene3D G3DSA:3.40.720.10 3 460 9.9E-104 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 PhaeoP54_03449 5c4883f1bd1c672dfa2a9db57bfbed5b 423 SMART SM00959 10 52 1.9E-15 T 14-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 PhaeoP54_03449 5c4883f1bd1c672dfa2a9db57bfbed5b 423 Gene3D G3DSA:1.10.720.10 6 51 4.4E-16 T 14-10-2018 PhaeoP54_03449 5c4883f1bd1c672dfa2a9db57bfbed5b 423 Gene3D G3DSA:2.40.50.140 52 128 3.2E-30 T 14-10-2018 PhaeoP54_03449 5c4883f1bd1c672dfa2a9db57bfbed5b 423 Pfam PF07498 Rho termination factor, N-terminal domain 10 50 8.6E-15 T 14-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 PhaeoP54_03449 5c4883f1bd1c672dfa2a9db57bfbed5b 423 TIGRFAM TIGR00767 rho: transcription termination factor Rho 7 422 4.8E-209 T 14-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 PhaeoP54_03449 5c4883f1bd1c672dfa2a9db57bfbed5b 423 Pfam PF07497 Rho termination factor, RNA-binding domain 57 130 5.5E-29 T 14-10-2018 IPR011113 Rho termination factor, RNA-binding domain GO:0003723|GO:0006353 PhaeoP54_03449 5c4883f1bd1c672dfa2a9db57bfbed5b 423 SMART SM00357 57 124 3.8E-12 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 PhaeoP54_03449 5c4883f1bd1c672dfa2a9db57bfbed5b 423 SUPERFAMILY SSF52540 96 376 1.12E-68 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_03449 5c4883f1bd1c672dfa2a9db57bfbed5b 423 Gene3D G3DSA:3.40.50.300 135 422 6.8E-126 T 14-10-2018 PhaeoP54_03449 5c4883f1bd1c672dfa2a9db57bfbed5b 423 Hamap MF_01884 Transcription termination factor Rho [rho]. 1 423 238.572 T 14-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 PhaeoP54_03449 5c4883f1bd1c672dfa2a9db57bfbed5b 423 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 164 368 4.4E-24 T 14-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 PhaeoP54_03449 5c4883f1bd1c672dfa2a9db57bfbed5b 423 SUPERFAMILY SSF68912 6 50 6.28E-11 T 14-10-2018 IPR036269 Rho termination factor, N-terminal domain superfamily PhaeoP54_03449 5c4883f1bd1c672dfa2a9db57bfbed5b 423 SUPERFAMILY SSF50249 54 130 6.85E-26 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold PhaeoP54_03449 5c4883f1bd1c672dfa2a9db57bfbed5b 423 SMART SM00382 175 360 7.1E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_02524 df0e4287c49561a74dccd6d9ad480960 282 Pfam PF00892 EamA-like transporter family 27 140 1.3E-7 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 PhaeoP54_02524 df0e4287c49561a74dccd6d9ad480960 282 Pfam PF00892 EamA-like transporter family 150 273 6.1E-7 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 PhaeoP54_02524 df0e4287c49561a74dccd6d9ad480960 282 SUPERFAMILY SSF103481 184 277 2.09E-11 T 14-10-2018 PhaeoP54_02524 df0e4287c49561a74dccd6d9ad480960 282 SUPERFAMILY SSF103481 47 143 4.84E-11 T 14-10-2018 PhaeoP54_02510 e983a930cdd50d8564b2289b85043d44 103 Pfam PF04800 ETC complex I subunit conserved region 2 98 1.1E-34 T 14-10-2018 IPR006885 NADH dehydrogenase ubiquinone Fe-S protein 4, mitochondrial GO:0016651|GO:0022900 PhaeoP54_02510 e983a930cdd50d8564b2289b85043d44 103 Gene3D G3DSA:3.30.160.190 1 80 3.8E-32 T 14-10-2018 IPR038532 NADH dehydrogenase ubiquinone Fe-S protein 4-like superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PhaeoP54_00192 66ba73572bb68ba214e724ceb7dc7f96 174 Pfam PF01161 Phosphatidylethanolamine-binding protein 41 172 8.4E-34 T 14-10-2018 IPR008914 Phosphatidylethanolamine-binding protein PhaeoP54_00192 66ba73572bb68ba214e724ceb7dc7f96 174 SUPERFAMILY SSF49777 24 173 3.01E-46 T 14-10-2018 IPR036610 PEBP-like superfamily PhaeoP54_00192 66ba73572bb68ba214e724ceb7dc7f96 174 Gene3D G3DSA:3.90.280.10 9 174 1.9E-49 T 14-10-2018 IPR036610 PEBP-like superfamily PhaeoP54_00192 66ba73572bb68ba214e724ceb7dc7f96 174 TIGRFAM TIGR00481 TIGR00481: Raf kinase inhibitor-like protein, YbhB/YbcL family 42 172 2.8E-37 T 14-10-2018 IPR005247 YbhB/YbcL PhaeoP54_03500 72e5854a8f6e57260ecdcb9be98b0ed7 98 SUPERFAMILY SSF101801 17 92 2.49E-15 T 14-10-2018 IPR036429 SpoA-like superfamily PhaeoP54_03500 72e5854a8f6e57260ecdcb9be98b0ed7 98 Gene3D G3DSA:2.30.330.10 4 96 4.3E-22 T 14-10-2018 IPR036429 SpoA-like superfamily PhaeoP54_03500 72e5854a8f6e57260ecdcb9be98b0ed7 98 PRINTS PR00956 Flagellar motor switch protein FliN signature 34 50 1.8E-11 T 14-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 PhaeoP54_03500 72e5854a8f6e57260ecdcb9be98b0ed7 98 PRINTS PR00956 Flagellar motor switch protein FliN signature 50 63 1.8E-11 T 14-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 PhaeoP54_03500 72e5854a8f6e57260ecdcb9be98b0ed7 98 PRINTS PR00956 Flagellar motor switch protein FliN signature 63 78 1.8E-11 T 14-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 PhaeoP54_03500 72e5854a8f6e57260ecdcb9be98b0ed7 98 PRINTS PR00956 Flagellar motor switch protein FliN signature 17 33 1.8E-11 T 14-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 PhaeoP54_03500 72e5854a8f6e57260ecdcb9be98b0ed7 98 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 20 91 9.2E-21 T 14-10-2018 IPR001543 Surface presentation of antigen (SpoA) PhaeoP54_02740 9e3847eaf98bd8d333722bb52a0a769a 348 Pfam PF12224 Putative amidoligase enzyme 45 298 7.7E-46 T 14-10-2018 IPR022025 Putative amidoligase enzyme PhaeoP54_02579 56d6423bb8305d18d04f16345d852e73 198 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 59 1.9E-15 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PhaeoP54_02579 56d6423bb8305d18d04f16345d852e73 198 Gene3D G3DSA:1.10.10.60 1 53 6.9E-20 T 14-10-2018 PhaeoP54_02579 56d6423bb8305d18d04f16345d852e73 198 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 7.5E-10 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PhaeoP54_02579 56d6423bb8305d18d04f16345d852e73 198 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 7.5E-10 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PhaeoP54_02579 56d6423bb8305d18d04f16345d852e73 198 SUPERFAMILY SSF46689 3 74 3.23E-19 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PhaeoP54_02579 56d6423bb8305d18d04f16345d852e73 198 Gene3D G3DSA:1.10.357.10 54 198 3.8E-28 T 14-10-2018 PhaeoP54_02579 56d6423bb8305d18d04f16345d852e73 198 SUPERFAMILY SSF48498 84 196 4.45E-10 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily PhaeoP54_02996 0a987cb895710fcc9ba9645d50f3cf7f 235 Gene3D G3DSA:1.10.3580.10 66 235 1.1E-57 T 14-10-2018 IPR023335 ATP12 orthogonal Bundle domain superfamily PhaeoP54_02996 0a987cb895710fcc9ba9645d50f3cf7f 235 Pfam PF07542 ATP12 chaperone protein 7 124 6.6E-38 T 14-10-2018 IPR011419 ATP12, ATP synthase F1-assembly protein GO:0043461 PhaeoP54_02996 0a987cb895710fcc9ba9645d50f3cf7f 235 Gene3D G3DSA:3.30.2180.30 1 65 3.9E-26 T 14-10-2018 PhaeoP54_02996 0a987cb895710fcc9ba9645d50f3cf7f 235 SUPERFAMILY SSF160909 1 231 9.81E-85 T 14-10-2018 PhaeoP54_01375 f3ac728b51ee54662e230c6ef03d4d26 344 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 8 304 1.8E-64 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme PhaeoP54_01375 f3ac728b51ee54662e230c6ef03d4d26 344 Gene3D G3DSA:3.40.50.1100 38 151 1.7E-110 T 14-10-2018 PhaeoP54_01375 f3ac728b51ee54662e230c6ef03d4d26 344 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 33 51 - T 14-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 PhaeoP54_01375 f3ac728b51ee54662e230c6ef03d4d26 344 SUPERFAMILY SSF53686 1 325 1.27E-90 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme PhaeoP54_01375 f3ac728b51ee54662e230c6ef03d4d26 344 Gene3D G3DSA:3.40.50.1100 9 310 1.7E-110 T 14-10-2018 PhaeoP54_00312 8c494395e6e66b76bfbf5994572a4570 240 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 134 162 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 PhaeoP54_00312 8c494395e6e66b76bfbf5994572a4570 240 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 178 0.0014 T 14-10-2018 PhaeoP54_00312 8c494395e6e66b76bfbf5994572a4570 240 TIGRFAM TIGR01829 AcAcCoA_reduct: acetoacetyl-CoA reductase 4 239 3.9E-103 T 14-10-2018 IPR011283 Acetoacetyl-CoA reductase GO:0005737|GO:0018454|GO:0042619|GO:0055114 KEGG: 00630+1.1.1.36|KEGG: 00650+1.1.1.36|MetaCyc: PWY-5676|MetaCyc: PWY-5741|MetaCyc: PWY-7216|MetaCyc: PWY-7948 PhaeoP54_00312 8c494395e6e66b76bfbf5994572a4570 240 Gene3D G3DSA:3.40.50.720 1 238 7.8E-76 T 14-10-2018 PhaeoP54_00312 8c494395e6e66b76bfbf5994572a4570 240 SUPERFAMILY SSF51735 3 236 7.59E-74 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PhaeoP54_00312 8c494395e6e66b76bfbf5994572a4570 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 74 85 5.3E-44 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_00312 8c494395e6e66b76bfbf5994572a4570 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 121 137 5.3E-44 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_00312 8c494395e6e66b76bfbf5994572a4570 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 147 166 5.3E-44 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_00312 8c494395e6e66b76bfbf5994572a4570 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 201 221 5.3E-44 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_00312 8c494395e6e66b76bfbf5994572a4570 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 5.3E-44 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_00312 8c494395e6e66b76bfbf5994572a4570 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 168 185 5.3E-44 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_00312 8c494395e6e66b76bfbf5994572a4570 240 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 74 85 7.0E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_00312 8c494395e6e66b76bfbf5994572a4570 240 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 127 135 7.0E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_00312 8c494395e6e66b76bfbf5994572a4570 240 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 147 166 7.0E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_00312 8c494395e6e66b76bfbf5994572a4570 240 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 11 235 3.8E-59 T 14-10-2018 PhaeoP54_03807 f01a46a05bf684fc9573858d396417fa 250 Gene3D G3DSA:1.10.3720.10 24 242 8.5E-46 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_03807 f01a46a05bf684fc9573858d396417fa 250 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 27 133 1.4E-14 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 PhaeoP54_03807 f01a46a05bf684fc9573858d396417fa 250 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 46 239 1.1E-20 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PhaeoP54_03807 f01a46a05bf684fc9573858d396417fa 250 SUPERFAMILY SSF161098 26 239 3.92E-38 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_01979 06cba7bb060072253a7b248786e15c67 596 PRINTS PR00344 Bacterial sensor protein C-terminal signature 512 526 9.6E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PhaeoP54_01979 06cba7bb060072253a7b248786e15c67 596 PRINTS PR00344 Bacterial sensor protein C-terminal signature 528 538 9.6E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PhaeoP54_01979 06cba7bb060072253a7b248786e15c67 596 PRINTS PR00344 Bacterial sensor protein C-terminal signature 566 579 9.6E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PhaeoP54_01979 06cba7bb060072253a7b248786e15c67 596 PRINTS PR00344 Bacterial sensor protein C-terminal signature 543 561 9.6E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PhaeoP54_01979 06cba7bb060072253a7b248786e15c67 596 SMART SM00387 469 582 1.4E-23 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PhaeoP54_01979 06cba7bb060072253a7b248786e15c67 596 PIRSF PIRSF036431 1 588 2.2E-149 T 14-10-2018 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) PhaeoP54_01979 06cba7bb060072253a7b248786e15c67 596 Gene3D G3DSA:3.30.450.20 47 207 3.2E-15 T 14-10-2018 PhaeoP54_01979 06cba7bb060072253a7b248786e15c67 596 SUPERFAMILY SSF47384 348 427 2.94E-13 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 PhaeoP54_01979 06cba7bb060072253a7b248786e15c67 596 SMART SM00388 359 427 2.6E-13 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PhaeoP54_01979 06cba7bb060072253a7b248786e15c67 596 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 470 579 4.3E-14 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PhaeoP54_01979 06cba7bb060072253a7b248786e15c67 596 SUPERFAMILY SSF103190 56 179 1.33E-6 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily PhaeoP54_01979 06cba7bb060072253a7b248786e15c67 596 Gene3D G3DSA:3.30.450.20 58 171 3.2E-15 T 14-10-2018 PhaeoP54_01979 06cba7bb060072253a7b248786e15c67 596 Gene3D G3DSA:1.10.287.130 335 422 1.7E-20 T 14-10-2018 PhaeoP54_01979 06cba7bb060072253a7b248786e15c67 596 Pfam PF00512 His Kinase A (phospho-acceptor) domain 359 426 5.3E-13 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PhaeoP54_01979 06cba7bb060072253a7b248786e15c67 596 SUPERFAMILY SSF55874 418 580 5.63E-30 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PhaeoP54_01979 06cba7bb060072253a7b248786e15c67 596 Gene3D G3DSA:3.30.565.10 427 585 1.5E-30 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PhaeoP54_01779 24e2f82fad50949b6ff7e81f2163c38c 397 TIGRFAM TIGR01537 portal_HK97: phage portal protein, HK97 family 51 391 5.2E-63 T 14-10-2018 IPR006427 Phage portal protein, HK97 PhaeoP54_01779 24e2f82fad50949b6ff7e81f2163c38c 397 Pfam PF04860 Phage portal protein 53 386 1.4E-86 T 14-10-2018 IPR006944 Bacteriophage/Gene transfer agent portal protein PhaeoP54_03406 2afda7c4ecded824c0aa128a068eb982 146 Pfam PF12802 MarR family 33 92 7.1E-12 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PhaeoP54_03406 2afda7c4ecded824c0aa128a068eb982 146 PRINTS PR00598 Bacterial regulatory protein MarR family signature 69 84 1.0E-5 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PhaeoP54_03406 2afda7c4ecded824c0aa128a068eb982 146 PRINTS PR00598 Bacterial regulatory protein MarR family signature 88 104 1.0E-5 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PhaeoP54_03406 2afda7c4ecded824c0aa128a068eb982 146 PRINTS PR00598 Bacterial regulatory protein MarR family signature 52 68 1.0E-5 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PhaeoP54_03406 2afda7c4ecded824c0aa128a068eb982 146 SUPERFAMILY SSF46785 3 140 1.22E-24 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_03406 2afda7c4ecded824c0aa128a068eb982 146 Gene3D G3DSA:1.10.10.10 1 142 5.5E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_03406 2afda7c4ecded824c0aa128a068eb982 146 SMART SM00347 27 128 1.3E-10 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PhaeoP54_01340 1090ca58290520ef01105b2c2563bd31 380 Pfam PF12704 MacB-like periplasmic core domain 20 228 4.6E-9 T 14-10-2018 IPR025857 MacB-like periplasmic core domain PhaeoP54_01340 1090ca58290520ef01105b2c2563bd31 380 Pfam PF02687 FtsX-like permease family 289 378 1.1E-8 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 PhaeoP54_03416 bd74647d1b639adda6c2461b7988c599 172 Gene3D G3DSA:2.40.440.10 32 170 9.7E-15 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like PhaeoP54_03416 bd74647d1b639adda6c2461b7988c599 172 SUPERFAMILY SSF141523 35 169 9.55E-23 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like PhaeoP54_03416 bd74647d1b639adda6c2461b7988c599 172 Pfam PF03734 L,D-transpeptidase catalytic domain 37 168 7.9E-18 T 14-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 PhaeoP54_02786 471b46c3c481ae34099420a2ac5d98c8 264 Pfam PF12800 4Fe-4S binding domain 19 32 0.0047 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PhaeoP54_02786 471b46c3c481ae34099420a2ac5d98c8 264 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 121 132 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PhaeoP54_02786 471b46c3c481ae34099420a2ac5d98c8 264 Pfam PF13247 4Fe-4S dicluster domain 81 182 9.9E-23 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PhaeoP54_02786 471b46c3c481ae34099420a2ac5d98c8 264 Gene3D G3DSA:3.30.70.20 2 240 2.3E-64 T 14-10-2018 PhaeoP54_02786 471b46c3c481ae34099420a2ac5d98c8 264 SUPERFAMILY SSF54862 11 220 1.67E-62 T 14-10-2018 PhaeoP54_00689 58a09097205c40bebe2f4a9f1395ed78 624 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 425 576 1.7E-25 T 14-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 PhaeoP54_00689 58a09097205c40bebe2f4a9f1395ed78 624 TIGRFAM TIGR04377 myo_inos_iolD: 3,5/4-trihydroxycyclohexa-1,2-dione hydrolase 9 621 6.7E-243 T 14-10-2018 IPR030817 3,5/4-Trihydroxycyclohexa-1,2-dione hydrolase GO:0016823|GO:0019310|GO:0030976 KEGG: 00562+3.7.1.22 PhaeoP54_00689 58a09097205c40bebe2f4a9f1395ed78 624 Gene3D G3DSA:3.40.50.970 9 204 6.7E-29 T 14-10-2018 PhaeoP54_00689 58a09097205c40bebe2f4a9f1395ed78 624 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 11 196 1.2E-35 T 14-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 PhaeoP54_00689 58a09097205c40bebe2f4a9f1395ed78 624 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 459 478 - T 14-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 PhaeoP54_00689 58a09097205c40bebe2f4a9f1395ed78 624 SUPERFAMILY SSF52467 185 384 8.28E-45 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily PhaeoP54_00689 58a09097205c40bebe2f4a9f1395ed78 624 SUPERFAMILY SSF52518 397 606 2.32E-39 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold PhaeoP54_00689 58a09097205c40bebe2f4a9f1395ed78 624 Gene3D G3DSA:3.40.50.1220 218 389 3.6E-45 T 14-10-2018 PhaeoP54_00689 58a09097205c40bebe2f4a9f1395ed78 624 SUPERFAMILY SSF52518 4 213 2.03E-30 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold PhaeoP54_00689 58a09097205c40bebe2f4a9f1395ed78 624 Gene3D G3DSA:3.40.50.970 390 585 3.7E-35 T 14-10-2018 PhaeoP54_00689 58a09097205c40bebe2f4a9f1395ed78 624 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 223 356 1.8E-37 T 14-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 PhaeoP54_01460 3b61f0ccb7692de7af14bf27a2eba62a 160 SUPERFAMILY SSF142433 6 154 1.7E-50 T 14-10-2018 IPR036653 CinA-like, C-terminal PhaeoP54_01460 3b61f0ccb7692de7af14bf27a2eba62a 160 Pfam PF02464 Competence-damaged protein 6 153 1.4E-52 T 14-10-2018 IPR008136 CinA, C-terminal PhaeoP54_01460 3b61f0ccb7692de7af14bf27a2eba62a 160 Gene3D G3DSA:3.90.950.20 2 157 4.2E-54 T 14-10-2018 IPR036653 CinA-like, C-terminal PhaeoP54_01460 3b61f0ccb7692de7af14bf27a2eba62a 160 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 8 151 2.5E-40 T 14-10-2018 IPR008136 CinA, C-terminal PhaeoP54_01771 7ff7e674d5f41a14ea2922ff6b5baacb 134 Pfam PF11836 Phage tail tube protein, GTA-gp10 20 115 1.3E-25 T 14-10-2018 IPR021791 Phage tail tube protein, GTA-gp10 PhaeoP54_02801 c4d4655ea5e4ec93e04ccd50eb1b3722 214 Gene3D G3DSA:1.10.1670.10 16 207 4.6E-68 T 14-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 PhaeoP54_02801 c4d4655ea5e4ec93e04ccd50eb1b3722 214 Gene3D G3DSA:1.10.340.30 25 136 4.6E-68 T 14-10-2018 PhaeoP54_02801 c4d4655ea5e4ec93e04ccd50eb1b3722 214 Pfam PF00633 Helix-hairpin-helix motif 104 131 4.1E-9 T 14-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 PhaeoP54_02801 c4d4655ea5e4ec93e04ccd50eb1b3722 214 PIRSF PIRSF001435 4 213 1.4E-46 T 14-10-2018 PhaeoP54_02801 c4d4655ea5e4ec93e04ccd50eb1b3722 214 TIGRFAM TIGR01083 nth: endonuclease III 10 198 1.3E-75 T 14-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 PhaeoP54_02801 c4d4655ea5e4ec93e04ccd50eb1b3722 214 Hamap MF_00942 Endonuclease III [nth]. 1 213 34.204 T 14-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 PhaeoP54_02801 c4d4655ea5e4ec93e04ccd50eb1b3722 214 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 38 171 4.0E-17 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 PhaeoP54_02801 c4d4655ea5e4ec93e04ccd50eb1b3722 214 SMART SM00478 42 189 6.5E-53 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 PhaeoP54_02801 c4d4655ea5e4ec93e04ccd50eb1b3722 214 SUPERFAMILY SSF48150 8 211 7.22E-68 T 14-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 PhaeoP54_02755 f642f467ba8deb91755cf59686aa764a 73 Gene3D G3DSA:3.30.429.10 2 71 1.8E-23 T 14-10-2018 IPR014347 Tautomerase/MIF superfamily PhaeoP54_02755 f642f467ba8deb91755cf59686aa764a 73 Pfam PF01361 Tautomerase enzyme 2 66 1.2E-19 T 14-10-2018 IPR004370 4-oxalocrotonate tautomerase GO:0006725|GO:0016853 PhaeoP54_02755 f642f467ba8deb91755cf59686aa764a 73 SUPERFAMILY SSF55331 2 71 2.11E-19 T 14-10-2018 IPR014347 Tautomerase/MIF superfamily PhaeoP54_02755 f642f467ba8deb91755cf59686aa764a 73 TIGRFAM TIGR00013 taut: 4-oxalocrotonate tautomerase family enzyme 1 70 1.2E-20 T 14-10-2018 IPR018191 4-oxalocrotonate tautomerase, Pseudomonas-type GO:0006725|GO:0016853 PhaeoP54_00358 a57d61ad7886a4bc7cbfb6f96f18f082 426 SUPERFAMILY SSF51735 181 372 1.03E-34 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PhaeoP54_00358 a57d61ad7886a4bc7cbfb6f96f18f082 426 TIGRFAM TIGR01751 crot-CoA-red: crotonyl-CoA carboxylase/reductase 31 420 9.7E-186 T 14-10-2018 IPR010085 Crotonyl-CoA reductase GO:0043880 KEGG: 00650+1.3.1.86 PhaeoP54_00358 a57d61ad7886a4bc7cbfb6f96f18f082 426 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 65 176 7.5E-14 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 PhaeoP54_00358 a57d61ad7886a4bc7cbfb6f96f18f082 426 Gene3D G3DSA:3.90.180.10 18 416 2.6E-200 T 14-10-2018 PhaeoP54_00358 a57d61ad7886a4bc7cbfb6f96f18f082 426 SUPERFAMILY SSF50129 38 216 2.59E-33 T 14-10-2018 IPR011032 GroES-like superfamily PhaeoP54_00358 a57d61ad7886a4bc7cbfb6f96f18f082 426 SMART SM00829 46 401 8.3E-8 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 PhaeoP54_00358 a57d61ad7886a4bc7cbfb6f96f18f082 426 Pfam PF00107 Zinc-binding dehydrogenase 222 372 1.1E-36 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 PhaeoP54_00358 a57d61ad7886a4bc7cbfb6f96f18f082 426 Gene3D G3DSA:3.40.50.720 198 357 2.6E-200 T 14-10-2018 PhaeoP54_02643 d4a9086181ff4832ca237708d4004a38 342 SMART SM00354 5 75 1.1E-20 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 PhaeoP54_02643 d4a9086181ff4832ca237708d4004a38 342 SUPERFAMILY SSF53822 64 333 2.75E-61 T 14-10-2018 IPR028082 Periplasmic binding protein-like I PhaeoP54_02643 d4a9086181ff4832ca237708d4004a38 342 Pfam PF00356 Bacterial regulatory proteins, lacI family 10 52 3.9E-13 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 PhaeoP54_02643 d4a9086181ff4832ca237708d4004a38 342 SUPERFAMILY SSF47413 5 63 5.63E-15 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 PhaeoP54_02643 d4a9086181ff4832ca237708d4004a38 342 Gene3D G3DSA:3.40.50.2300 157 331 2.3E-48 T 14-10-2018 PhaeoP54_02643 d4a9086181ff4832ca237708d4004a38 342 Pfam PF13377 Periplasmic binding protein-like domain 173 330 8.9E-29 T 14-10-2018 PhaeoP54_02643 d4a9086181ff4832ca237708d4004a38 342 Gene3D G3DSA:3.40.50.2300 62 153 2.7E-18 T 14-10-2018 PhaeoP54_02643 d4a9086181ff4832ca237708d4004a38 342 Gene3D G3DSA:1.10.260.40 1 61 7.0E-19 T 14-10-2018 PhaeoP54_03694 1f35e4dc9bb31ed4bf537e8811d3eeb7 307 SUPERFAMILY SSF51120 126 294 3.51E-35 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal PhaeoP54_03694 1f35e4dc9bb31ed4bf537e8811d3eeb7 307 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 177 193 0.038 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_03694 1f35e4dc9bb31ed4bf537e8811d3eeb7 307 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 159 175 0.014 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_03694 1f35e4dc9bb31ed4bf537e8811d3eeb7 307 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 141 157 0.0026 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_03694 1f35e4dc9bb31ed4bf537e8811d3eeb7 307 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 125 139 13.0 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_03694 1f35e4dc9bb31ed4bf537e8811d3eeb7 307 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 213 229 0.002 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_03694 1f35e4dc9bb31ed4bf537e8811d3eeb7 307 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 230 244 56.0 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_03694 1f35e4dc9bb31ed4bf537e8811d3eeb7 307 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 195 211 9.6E-4 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_03694 1f35e4dc9bb31ed4bf537e8811d3eeb7 307 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 200 218 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site PhaeoP54_03694 1f35e4dc9bb31ed4bf537e8811d3eeb7 307 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 209 227 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site PhaeoP54_03694 1f35e4dc9bb31ed4bf537e8811d3eeb7 307 Gene3D G3DSA:2.150.10.10 73 161 8.5E-8 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal PhaeoP54_03694 1f35e4dc9bb31ed4bf537e8811d3eeb7 307 Gene3D G3DSA:2.150.10.10 162 196 4.2E-10 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal PhaeoP54_03694 1f35e4dc9bb31ed4bf537e8811d3eeb7 307 Gene3D G3DSA:2.150.10.10 197 303 1.9E-23 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal PhaeoP54_03694 1f35e4dc9bb31ed4bf537e8811d3eeb7 307 PRINTS PR00313 NodO calcium binding signature 192 203 2.5E-11 T 14-10-2018 PhaeoP54_03694 1f35e4dc9bb31ed4bf537e8811d3eeb7 307 PRINTS PR00313 NodO calcium binding signature 231 240 2.5E-11 T 14-10-2018 PhaeoP54_03694 1f35e4dc9bb31ed4bf537e8811d3eeb7 307 PRINTS PR00313 NodO calcium binding signature 222 230 2.5E-11 T 14-10-2018 PhaeoP54_03694 1f35e4dc9bb31ed4bf537e8811d3eeb7 307 PRINTS PR00313 NodO calcium binding signature 213 221 2.5E-11 T 14-10-2018 PhaeoP54_01465 25946c2d90641771c9f602aa8b69fd67 470 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 337 346 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site PhaeoP54_01465 25946c2d90641771c9f602aa8b69fd67 470 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 425 442 2.1E-9 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PhaeoP54_01465 25946c2d90641771c9f602aa8b69fd67 470 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 442 462 2.1E-9 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PhaeoP54_01465 25946c2d90641771c9f602aa8b69fd67 470 Pfam PF00072 Response regulator receiver domain 5 113 2.5E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PhaeoP54_01465 25946c2d90641771c9f602aa8b69fd67 470 SUPERFAMILY SSF52172 4 198 2.42E-37 T 14-10-2018 IPR011006 CheY-like superfamily PhaeoP54_01465 25946c2d90641771c9f602aa8b69fd67 470 SUPERFAMILY SSF52540 153 368 1.87E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_01465 25946c2d90641771c9f602aa8b69fd67 470 SMART SM00382 173 288 2.0E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_01465 25946c2d90641771c9f602aa8b69fd67 470 Pfam PF02954 Bacterial regulatory protein, Fis family 419 456 6.1E-11 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PhaeoP54_01465 25946c2d90641771c9f602aa8b69fd67 470 Gene3D G3DSA:1.10.10.60 377 461 1.0E-19 T 14-10-2018 PhaeoP54_01465 25946c2d90641771c9f602aa8b69fd67 470 Gene3D G3DSA:3.40.50.2300 2 133 6.2E-30 T 14-10-2018 PhaeoP54_01465 25946c2d90641771c9f602aa8b69fd67 470 Gene3D G3DSA:3.40.50.300 152 295 3.3E-36 T 14-10-2018 PhaeoP54_01465 25946c2d90641771c9f602aa8b69fd67 470 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 177 190 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 PhaeoP54_01465 25946c2d90641771c9f602aa8b69fd67 470 SUPERFAMILY SSF46689 380 462 7.17E-16 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PhaeoP54_01465 25946c2d90641771c9f602aa8b69fd67 470 Gene3D G3DSA:1.10.8.60 296 373 3.4E-19 T 14-10-2018 PhaeoP54_01465 25946c2d90641771c9f602aa8b69fd67 470 SMART SM00448 3 114 1.1E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PhaeoP54_01465 25946c2d90641771c9f602aa8b69fd67 470 Pfam PF14532 Sigma-54 interaction domain 154 296 1.1E-25 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 PhaeoP54_03166 fbd33f73be41e23bdcac1192cf79bcfb 329 Gene3D G3DSA:3.40.800.10 4 328 1.8E-72 T 14-10-2018 PhaeoP54_03166 fbd33f73be41e23bdcac1192cf79bcfb 329 PIRSF PIRSF036979 8 323 1.2E-51 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 PhaeoP54_03166 fbd33f73be41e23bdcac1192cf79bcfb 329 Pfam PF00491 Arginase family 33 315 1.9E-57 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 PhaeoP54_03166 fbd33f73be41e23bdcac1192cf79bcfb 329 PRINTS PR00116 Arginase signature 241 270 5.2E-6 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 PhaeoP54_03166 fbd33f73be41e23bdcac1192cf79bcfb 329 PRINTS PR00116 Arginase signature 121 136 5.2E-6 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 PhaeoP54_03166 fbd33f73be41e23bdcac1192cf79bcfb 329 SUPERFAMILY SSF52768 8 321 6.84E-67 T 14-10-2018 IPR023696 Ureohydrolase domain superfamily PhaeoP54_01585 250ca513ea8fad1707a5fcfaf39a9d19 544 SUPERFAMILY SSF47090 206 283 4.45E-17 T 14-10-2018 IPR036365 PGBD-like superfamily PhaeoP54_01585 250ca513ea8fad1707a5fcfaf39a9d19 544 SUPERFAMILY SSF141523 302 460 9.16E-16 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like PhaeoP54_01585 250ca513ea8fad1707a5fcfaf39a9d19 544 Pfam PF01471 Putative peptidoglycan binding domain 220 274 8.0E-13 T 14-10-2018 IPR002477 Peptidoglycan binding-like PhaeoP54_01585 250ca513ea8fad1707a5fcfaf39a9d19 544 Pfam PF03734 L,D-transpeptidase catalytic domain 304 485 3.3E-27 T 14-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 PhaeoP54_01585 250ca513ea8fad1707a5fcfaf39a9d19 544 Gene3D G3DSA:2.40.440.10 248 506 3.4E-25 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like PhaeoP54_01668 987c85ff67919cb9ff0184fd25b31779 396 Pfam PF00155 Aminotransferase class I and II 38 391 1.1E-41 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 PhaeoP54_01668 987c85ff67919cb9ff0184fd25b31779 396 Gene3D G3DSA:3.40.640.10 28 396 5.0E-78 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PhaeoP54_01668 987c85ff67919cb9ff0184fd25b31779 396 SUPERFAMILY SSF53383 34 394 6.12E-81 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PhaeoP54_00521 3ac4aecf93f05c16c58c2e72a5fe55f6 346 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 164 171 - T 14-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 PhaeoP54_00521 3ac4aecf93f05c16c58c2e72a5fe55f6 346 SUPERFAMILY SSF51735 18 180 1.44E-44 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PhaeoP54_00521 3ac4aecf93f05c16c58c2e72a5fe55f6 346 Gene3D G3DSA:3.40.50.720 19 340 4.7E-106 T 14-10-2018 PhaeoP54_00521 3ac4aecf93f05c16c58c2e72a5fe55f6 346 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 171 325 2.1E-41 T 14-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 PhaeoP54_00521 3ac4aecf93f05c16c58c2e72a5fe55f6 346 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 18 118 1.8E-25 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 PhaeoP54_00521 3ac4aecf93f05c16c58c2e72a5fe55f6 346 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 125 138 8.3E-30 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 PhaeoP54_00521 3ac4aecf93f05c16c58c2e72a5fe55f6 346 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 187 203 8.3E-30 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 PhaeoP54_00521 3ac4aecf93f05c16c58c2e72a5fe55f6 346 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 243 260 8.3E-30 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 PhaeoP54_00521 3ac4aecf93f05c16c58c2e72a5fe55f6 346 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 281 296 8.3E-30 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 PhaeoP54_00521 3ac4aecf93f05c16c58c2e72a5fe55f6 346 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 160 178 8.3E-30 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 PhaeoP54_00521 3ac4aecf93f05c16c58c2e72a5fe55f6 346 SUPERFAMILY SSF55347 166 326 4.46E-50 T 14-10-2018 PhaeoP54_00521 3ac4aecf93f05c16c58c2e72a5fe55f6 346 PIRSF PIRSF000149 16 346 2.1E-107 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 PhaeoP54_00521 3ac4aecf93f05c16c58c2e72a5fe55f6 346 Gene3D G3DSA:3.30.360.10 165 327 4.7E-106 T 14-10-2018 PhaeoP54_00521 3ac4aecf93f05c16c58c2e72a5fe55f6 346 SMART SM00846 18 166 9.2E-59 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 PhaeoP54_01243 27013536f140ff76e27a3d3900823a48 251 SUPERFAMILY SSF52540 20 245 8.1E-54 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_01243 27013536f140ff76e27a3d3900823a48 251 ProSitePatterns PS00211 ABC transporters family signature. 152 166 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PhaeoP54_01243 27013536f140ff76e27a3d3900823a48 251 SMART SM00382 45 228 1.9E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_01243 27013536f140ff76e27a3d3900823a48 251 Gene3D G3DSA:3.40.50.300 17 251 3.4E-55 T 14-10-2018 PhaeoP54_01243 27013536f140ff76e27a3d3900823a48 251 Pfam PF00005 ABC transporter 37 179 8.0E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PhaeoP54_02886 30401373b995155461357ceea423329f 366 Gene3D G3DSA:3.40.50.10540 2 320 1.3E-102 T 14-10-2018 IPR023606 CoA-transferase family III domain superfamily PhaeoP54_02886 30401373b995155461357ceea423329f 366 Gene3D G3DSA:3.30.1540.10 217 305 1.3E-102 T 14-10-2018 PhaeoP54_02886 30401373b995155461357ceea423329f 366 Pfam PF02515 CoA-transferase family III 2 354 3.3E-78 T 14-10-2018 IPR003673 CoA-transferase family III GO:0003824 PhaeoP54_02886 30401373b995155461357ceea423329f 366 SUPERFAMILY SSF89796 2 361 1.7E-99 T 14-10-2018 IPR023606 CoA-transferase family III domain superfamily PhaeoP54_00427 982127264963d12c52bb28ca348444d9 363 SUPERFAMILY SSF51735 155 328 4.6E-41 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PhaeoP54_00427 982127264963d12c52bb28ca348444d9 363 SUPERFAMILY SSF50129 4 185 8.52E-51 T 14-10-2018 IPR011032 GroES-like superfamily PhaeoP54_00427 982127264963d12c52bb28ca348444d9 363 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 148 4.3E-25 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 PhaeoP54_00427 982127264963d12c52bb28ca348444d9 363 Gene3D G3DSA:3.90.180.10 7 354 2.8E-108 T 14-10-2018 PhaeoP54_00427 982127264963d12c52bb28ca348444d9 363 Pfam PF00107 Zinc-binding dehydrogenase 190 318 2.8E-25 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 PhaeoP54_00427 982127264963d12c52bb28ca348444d9 363 Gene3D G3DSA:3.40.50.720 167 304 2.8E-108 T 14-10-2018 PhaeoP54_00427 982127264963d12c52bb28ca348444d9 363 SUPERFAMILY SSF50129 311 361 1.22E-6 T 14-10-2018 IPR011032 GroES-like superfamily PhaeoP54_00427 982127264963d12c52bb28ca348444d9 363 SMART SM00829 13 359 3.8E-6 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 PhaeoP54_00427 982127264963d12c52bb28ca348444d9 363 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 61 75 - T 14-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 PhaeoP54_01682 3ebfb48232707335144bf889c885649c 298 SUPERFAMILY SSF51120 183 276 1.1E-6 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal PhaeoP54_01682 3ebfb48232707335144bf889c885649c 298 Gene3D G3DSA:2.150.10.10 179 292 2.0E-6 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal PhaeoP54_01682 3ebfb48232707335144bf889c885649c 298 Gene3D G3DSA:2.150.10.10 36 94 3.0E-10 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal PhaeoP54_01682 3ebfb48232707335144bf889c885649c 298 PRINTS PR00313 NodO calcium binding signature 79 90 2.9E-10 T 14-10-2018 PhaeoP54_01682 3ebfb48232707335144bf889c885649c 298 PRINTS PR00313 NodO calcium binding signature 136 144 2.9E-10 T 14-10-2018 PhaeoP54_01682 3ebfb48232707335144bf889c885649c 298 PRINTS PR00313 NodO calcium binding signature 208 217 2.9E-10 T 14-10-2018 PhaeoP54_01682 3ebfb48232707335144bf889c885649c 298 PRINTS PR00313 NodO calcium binding signature 100 108 2.9E-10 T 14-10-2018 PhaeoP54_01682 3ebfb48232707335144bf889c885649c 298 Gene3D G3DSA:2.150.10.10 95 178 1.7E-11 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal PhaeoP54_01682 3ebfb48232707335144bf889c885649c 298 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 45 59 0.66 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_01682 3ebfb48232707335144bf889c885649c 298 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 128 143 0.054 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_01682 3ebfb48232707335144bf889c885649c 298 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 81 97 0.053 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_01682 3ebfb48232707335144bf889c885649c 298 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 64 80 18.0 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_01682 3ebfb48232707335144bf889c885649c 298 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 108 125 0.0069 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_01682 3ebfb48232707335144bf889c885649c 298 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 187 197 4.7 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_01682 3ebfb48232707335144bf889c885649c 298 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 203 214 0.75 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_01682 3ebfb48232707335144bf889c885649c 298 SUPERFAMILY SSF51120 34 150 3.92E-20 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal PhaeoP54_00949 90f1d2115e72d86cefe23d2c969f7397 713 Pfam PF03880 DbpA RNA binding domain 463 522 2.7E-14 T 14-10-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain PhaeoP54_00949 90f1d2115e72d86cefe23d2c969f7397 713 Gene3D G3DSA:3.40.50.300 6 217 5.3E-63 T 14-10-2018 PhaeoP54_00949 90f1d2115e72d86cefe23d2c969f7397 713 Pfam PF00271 Helicase conserved C-terminal domain 244 347 3.9E-25 T 14-10-2018 IPR001650 Helicase, C-terminal PhaeoP54_00949 90f1d2115e72d86cefe23d2c969f7397 713 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 161 169 - T 14-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site PhaeoP54_00949 90f1d2115e72d86cefe23d2c969f7397 713 Pfam PF00270 DEAD/DEAH box helicase 32 201 6.9E-40 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 PhaeoP54_00949 90f1d2115e72d86cefe23d2c969f7397 713 SUPERFAMILY SSF52540 84 359 1.12E-65 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_00949 90f1d2115e72d86cefe23d2c969f7397 713 SMART SM00487 27 230 3.6E-48 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain PhaeoP54_00949 90f1d2115e72d86cefe23d2c969f7397 713 SMART SM00490 266 347 5.5E-28 T 14-10-2018 IPR001650 Helicase, C-terminal PhaeoP54_00949 90f1d2115e72d86cefe23d2c969f7397 713 Gene3D G3DSA:3.40.50.300 222 422 5.0E-42 T 14-10-2018 PhaeoP54_00949 90f1d2115e72d86cefe23d2c969f7397 713 Gene3D G3DSA:3.30.70.330 464 527 2.5E-7 T 14-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily PhaeoP54_02811 1db4ae4726864d3ca7301c1c6adb9545 107 Pfam PF07978 NIPSNAP 5 100 8.2E-26 T 14-10-2018 IPR012577 NIPSNAP PhaeoP54_02811 1db4ae4726864d3ca7301c1c6adb9545 107 SUPERFAMILY SSF54909 1 100 2.68E-20 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel PhaeoP54_03817 edab2c172bbc1cbfda41aaccaeabd09a 314 Gene3D G3DSA:1.10.443.10 97 312 1.3E-28 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 PhaeoP54_03817 edab2c172bbc1cbfda41aaccaeabd09a 314 Pfam PF00589 Phage integrase family 133 293 3.7E-17 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 PhaeoP54_03817 edab2c172bbc1cbfda41aaccaeabd09a 314 SUPERFAMILY SSF56349 3 299 3.24E-30 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 PhaeoP54_01559 59cfbd17f1a5fa181801654e56c77b6c 318 Pfam PF03466 LysR substrate binding domain 109 309 1.5E-39 T 14-10-2018 IPR005119 LysR, substrate-binding PhaeoP54_01559 59cfbd17f1a5fa181801654e56c77b6c 318 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 2.2E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PhaeoP54_01559 59cfbd17f1a5fa181801654e56c77b6c 318 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 52 62 2.2E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PhaeoP54_01559 59cfbd17f1a5fa181801654e56c77b6c 318 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 62 73 2.2E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PhaeoP54_01559 59cfbd17f1a5fa181801654e56c77b6c 318 Gene3D G3DSA:1.10.10.10 25 110 5.5E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_01559 59cfbd17f1a5fa181801654e56c77b6c 318 Gene3D G3DSA:3.40.190.10 181 279 3.8E-60 T 14-10-2018 PhaeoP54_01559 59cfbd17f1a5fa181801654e56c77b6c 318 Gene3D G3DSA:3.40.190.10 121 306 3.8E-60 T 14-10-2018 PhaeoP54_01559 59cfbd17f1a5fa181801654e56c77b6c 318 SUPERFAMILY SSF46785 18 132 5.62E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_01559 59cfbd17f1a5fa181801654e56c77b6c 318 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 28 85 5.9E-16 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PhaeoP54_01559 59cfbd17f1a5fa181801654e56c77b6c 318 SUPERFAMILY SSF53850 110 312 1.81E-42 T 14-10-2018 PhaeoP54_00285 e942c70bb6c5259da764cc4892771ac7 315 SUPERFAMILY SSF55821 11 211 3.66E-63 T 14-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily PhaeoP54_00285 e942c70bb6c5259da764cc4892771ac7 315 Pfam PF01300 Telomere recombination 22 198 8.6E-53 T 14-10-2018 IPR006070 YrdC-like domain GO:0003725 PhaeoP54_00285 e942c70bb6c5259da764cc4892771ac7 315 Pfam PF03481 Putative GTP-binding controlling metal-binding 202 313 1.0E-18 T 14-10-2018 IPR005145 Putative GTP-binding controlling metal-binding domain PhaeoP54_00285 e942c70bb6c5259da764cc4892771ac7 315 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 10 209 3.3E-54 T 14-10-2018 IPR006070 YrdC-like domain GO:0003725 PhaeoP54_00285 e942c70bb6c5259da764cc4892771ac7 315 Gene3D G3DSA:3.90.870.10 5 214 5.3E-72 T 14-10-2018 PhaeoP54_00285 e942c70bb6c5259da764cc4892771ac7 315 PIRSF PIRSF004930 3 315 2.2E-103 T 14-10-2018 IPR010923 tRNA threonylcarbamoyladenosine biosynthesis protein SUA5 PhaeoP54_00285 e942c70bb6c5259da764cc4892771ac7 315 Gene3D G3DSA:3.40.50.11030 254 315 1.8E-8 T 14-10-2018 IPR038385 Threonylcarbamoyl-AMP synthase, C-terminal domain superfamily PhaeoP54_02834 0e5c7b1e44d111a912e12f36b48567ed 758 Gene3D G3DSA:3.40.710.10 366 729 3.0E-103 T 14-10-2018 PhaeoP54_02834 0e5c7b1e44d111a912e12f36b48567ed 758 Pfam PF00905 Penicillin binding protein transpeptidase domain 434 682 7.4E-31 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 PhaeoP54_02834 0e5c7b1e44d111a912e12f36b48567ed 758 SUPERFAMILY SSF53955 143 370 6.47E-62 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily PhaeoP54_02834 0e5c7b1e44d111a912e12f36b48567ed 758 Gene3D G3DSA:1.10.3810.10 144 363 7.0E-62 T 14-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 PhaeoP54_02834 0e5c7b1e44d111a912e12f36b48567ed 758 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 164 708 1.9E-156 T 14-10-2018 PhaeoP54_02834 0e5c7b1e44d111a912e12f36b48567ed 758 Pfam PF00912 Transglycosylase 159 346 4.3E-54 T 14-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 PhaeoP54_02834 0e5c7b1e44d111a912e12f36b48567ed 758 SUPERFAMILY SSF56601 328 721 1.02E-112 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like PhaeoP54_00550 14e24b7af7a0e866e7e4086c68b64691 731 Pfam PF00270 DEAD/DEAH box helicase 201 360 8.2E-13 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 PhaeoP54_00550 14e24b7af7a0e866e7e4086c68b64691 731 SUPERFAMILY SSF52540 177 375 3.93E-36 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_00550 14e24b7af7a0e866e7e4086c68b64691 731 Gene3D G3DSA:1.10.8.630 13 113 1.4E-14 T 14-10-2018 PhaeoP54_00550 14e24b7af7a0e866e7e4086c68b64691 731 SMART SM00490 495 592 7.2E-4 T 14-10-2018 IPR001650 Helicase, C-terminal PhaeoP54_00550 14e24b7af7a0e866e7e4086c68b64691 731 Pfam PF00271 Helicase conserved C-terminal domain 507 591 8.0E-5 T 14-10-2018 IPR001650 Helicase, C-terminal PhaeoP54_00550 14e24b7af7a0e866e7e4086c68b64691 731 TIGRFAM TIGR00595 priA: primosomal protein N' 221 727 4.0E-179 T 14-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 PhaeoP54_00550 14e24b7af7a0e866e7e4086c68b64691 731 SMART SM00487 193 392 9.9E-19 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain PhaeoP54_00550 14e24b7af7a0e866e7e4086c68b64691 731 Gene3D G3DSA:3.40.50.300 191 379 1.1E-66 T 14-10-2018 PhaeoP54_00550 14e24b7af7a0e866e7e4086c68b64691 731 Hamap MF_00983 Probable primosomal protein N' [priA]. 15 730 22.799 T 14-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 PhaeoP54_00550 14e24b7af7a0e866e7e4086c68b64691 731 SUPERFAMILY SSF52540 220 622 4.62E-25 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_03942 30e2eaccd4c18a5a68d8710491cf5816 377 SUPERFAMILY SSF55347 128 293 1.05E-32 T 14-10-2018 PhaeoP54_03942 30e2eaccd4c18a5a68d8710491cf5816 377 SUPERFAMILY SSF51735 3 171 2.54E-36 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PhaeoP54_03942 30e2eaccd4c18a5a68d8710491cf5816 377 Gene3D G3DSA:3.40.50.720 2 124 8.4E-27 T 14-10-2018 PhaeoP54_03942 30e2eaccd4c18a5a68d8710491cf5816 377 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 5 118 4.1E-15 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 PhaeoP54_03942 30e2eaccd4c18a5a68d8710491cf5816 377 Gene3D G3DSA:3.30.360.10 128 357 1.9E-40 T 14-10-2018 PhaeoP54_03018 b632fe118f91141df2be9e3190da9d8d 101 ProSitePatterns PS00527 Ribosomal protein S14 signature. 63 85 - T 14-10-2018 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PhaeoP54_03018 b632fe118f91141df2be9e3190da9d8d 101 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 101 27.299 T 14-10-2018 IPR023036 Ribosomal protein S14, bacterial/plastid PhaeoP54_03018 b632fe118f91141df2be9e3190da9d8d 101 SUPERFAMILY SSF57716 2 101 3.28E-38 T 14-10-2018 PhaeoP54_03018 b632fe118f91141df2be9e3190da9d8d 101 Pfam PF00253 Ribosomal protein S14p/S29e 48 100 3.2E-24 T 14-10-2018 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PhaeoP54_03018 b632fe118f91141df2be9e3190da9d8d 101 Gene3D G3DSA:4.10.830.10 40 101 1.5E-22 T 14-10-2018 PhaeoP54_03262 da93249338e98e9c229cfa47a294299a 68 Hamap MF_01187 UPF0434 protein YcaR [ycaR]. 15 68 25.207 T 14-10-2018 IPR038053 Uncharacterised protein family UPF0434 PhaeoP54_03262 da93249338e98e9c229cfa47a294299a 68 Gene3D G3DSA:2.20.25.10 22 68 3.5E-20 T 14-10-2018 PhaeoP54_03262 da93249338e98e9c229cfa47a294299a 68 SUPERFAMILY SSF158997 14 67 6.8E-18 T 14-10-2018 PhaeoP54_03262 da93249338e98e9c229cfa47a294299a 68 Pfam PF03966 Trm112p-like protein 16 55 1.8E-5 T 14-10-2018 IPR005651 Trm112-like PhaeoP54_00984 73a070e185f379d7a7e3d889ad78a5b3 388 TIGRFAM TIGR01892 AcOrn-deacetyl: acetylornithine deacetylase (ArgE) 9 383 1.4E-112 T 14-10-2018 IPR010169 Acetylornithine deacetylase ArgE GO:0005737|GO:0006526|GO:0008777 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154 PhaeoP54_00984 73a070e185f379d7a7e3d889ad78a5b3 388 SUPERFAMILY SSF53187 8 387 2.86E-53 T 14-10-2018 PhaeoP54_00984 73a070e185f379d7a7e3d889ad78a5b3 388 Pfam PF07687 Peptidase dimerisation domain 174 286 5.1E-15 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain PhaeoP54_00984 73a070e185f379d7a7e3d889ad78a5b3 388 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 104 141 - T 14-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 PhaeoP54_00984 73a070e185f379d7a7e3d889ad78a5b3 388 Gene3D G3DSA:3.30.70.360 178 296 1.3E-85 T 14-10-2018 PhaeoP54_00984 73a070e185f379d7a7e3d889ad78a5b3 388 SUPERFAMILY SSF55031 180 290 2.24E-16 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain PhaeoP54_00984 73a070e185f379d7a7e3d889ad78a5b3 388 Pfam PF01546 Peptidase family M20/M25/M40 71 384 8.5E-32 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 PhaeoP54_00984 73a070e185f379d7a7e3d889ad78a5b3 388 Gene3D G3DSA:3.40.630.10 14 372 1.3E-85 T 14-10-2018 PhaeoP54_03126 5433ad8a77412bc0449248d9a7fba678 111 PIRSF PIRSF032126 1 111 5.2E-29 T 14-10-2018 IPR016989 ATP synthase protein I, alphaproteobacterial PhaeoP54_03126 5433ad8a77412bc0449248d9a7fba678 111 Pfam PF09527 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter 39 89 5.1E-13 T 14-10-2018 IPR032820 Putative F0F1-ATPase subunit, Ca2+/Mg2+ transporter PhaeoP54_03645 4600c6e0fa9467aa82ebca5a6de68c1b 411 SUPERFAMILY SSF47781 306 381 4.15E-11 T 14-10-2018 IPR010994 RuvA domain 2-like PhaeoP54_03645 4600c6e0fa9467aa82ebca5a6de68c1b 411 TIGRFAM TIGR03916 rSAM_link_UDG: putative DNA modification/repair radical SAM protein 7 387 8.6E-174 T 14-10-2018 IPR023874 DNA modification/repair radical SAM protein, putative PhaeoP54_03645 4600c6e0fa9467aa82ebca5a6de68c1b 411 Pfam PF04055 Radical SAM superfamily 65 195 4.9E-9 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 PhaeoP54_03645 4600c6e0fa9467aa82ebca5a6de68c1b 411 Gene3D G3DSA:3.20.20.70 54 205 2.1E-8 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PhaeoP54_03645 4600c6e0fa9467aa82ebca5a6de68c1b 411 SMART SM00729 59 286 8.4E-4 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 PhaeoP54_03645 4600c6e0fa9467aa82ebca5a6de68c1b 411 SUPERFAMILY SSF102114 48 196 7.06E-16 T 14-10-2018 PhaeoP54_00494 69bb3e21ba015ba9b96be29fa6252521 376 Gene3D G3DSA:3.30.2130.30 10 247 1.6E-100 T 14-10-2018 PhaeoP54_00494 69bb3e21ba015ba9b96be29fa6252521 376 Gene3D G3DSA:3.40.50.150 168 351 1.6E-100 T 14-10-2018 PhaeoP54_00494 69bb3e21ba015ba9b96be29fa6252521 376 SUPERFAMILY SSF53335 141 345 3.25E-36 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PhaeoP54_00494 69bb3e21ba015ba9b96be29fa6252521 376 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 300 306 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 PhaeoP54_00494 69bb3e21ba015ba9b96be29fa6252521 376 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 192 206 7.5E-5 T 14-10-2018 PhaeoP54_00494 69bb3e21ba015ba9b96be29fa6252521 376 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 297 309 7.5E-5 T 14-10-2018 PhaeoP54_00494 69bb3e21ba015ba9b96be29fa6252521 376 ProSitePatterns PS01261 Uncharacterized protein family UPF0020 signature. 194 205 - T 14-10-2018 IPR000241 Putative RNA methylase domain PhaeoP54_00494 69bb3e21ba015ba9b96be29fa6252521 376 Pfam PF01170 Putative RNA methylase family UPF0020 161 350 5.5E-39 T 14-10-2018 IPR000241 Putative RNA methylase domain PhaeoP54_00786 0113de78a7df8063bb36f8f9f1c5e769 133 Pfam PF07845 Protein of unknown function (DUF1636) 6 118 1.9E-34 T 14-10-2018 IPR012863 Protein of unknown function DUF1636 PhaeoP54_00786 0113de78a7df8063bb36f8f9f1c5e769 133 SUPERFAMILY SSF52833 3 102 2.06E-7 T 14-10-2018 IPR036249 Thioredoxin-like superfamily PhaeoP54_00428 d6507caa998c6403016dde062fc45f42 449 Gene3D G3DSA:1.20.200.30 1 359 3.7E-101 T 14-10-2018 PhaeoP54_00428 d6507caa998c6403016dde062fc45f42 449 Gene3D G3DSA:1.10.40.30 362 442 1.2E-8 T 14-10-2018 PhaeoP54_00428 d6507caa998c6403016dde062fc45f42 449 Pfam PF00206 Lyase 23 298 3.4E-32 T 14-10-2018 IPR022761 Fumarate lyase, N-terminal PhaeoP54_00428 d6507caa998c6403016dde062fc45f42 449 PRINTS PR00149 Fumarate lyase superfamily signature 275 291 3.8E-14 T 14-10-2018 IPR000362 Fumarate lyase family PhaeoP54_00428 d6507caa998c6403016dde062fc45f42 449 PRINTS PR00149 Fumarate lyase superfamily signature 148 166 3.8E-14 T 14-10-2018 IPR000362 Fumarate lyase family PhaeoP54_00428 d6507caa998c6403016dde062fc45f42 449 PRINTS PR00149 Fumarate lyase superfamily signature 103 121 3.8E-14 T 14-10-2018 IPR000362 Fumarate lyase family PhaeoP54_00428 d6507caa998c6403016dde062fc45f42 449 PRINTS PR00149 Fumarate lyase superfamily signature 233 260 3.8E-14 T 14-10-2018 IPR000362 Fumarate lyase family PhaeoP54_00428 d6507caa998c6403016dde062fc45f42 449 SUPERFAMILY SSF48557 14 441 2.2E-80 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 PhaeoP54_00428 d6507caa998c6403016dde062fc45f42 449 SMART SM00998 363 436 2.6E-7 T 14-10-2018 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 PhaeoP54_02012 179f82d12d5cb7098f3970a6776768f5 251 Pfam PF09836 Putative DNA-binding domain 5 95 7.9E-23 T 14-10-2018 IPR018640 Putative DNA-binding domain, bacteria PhaeoP54_03365 f2b8edb92285ada5302639f5c27cf735 173 Pfam PF01625 Peptide methionine sulfoxide reductase 8 154 7.4E-56 T 14-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 PhaeoP54_03365 f2b8edb92285ada5302639f5c27cf735 173 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 5 160 33.602 T 14-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 PhaeoP54_03365 f2b8edb92285ada5302639f5c27cf735 173 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 7 154 8.6E-49 T 14-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 PhaeoP54_03365 f2b8edb92285ada5302639f5c27cf735 173 SUPERFAMILY SSF55068 3 162 1.57E-63 T 14-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 PhaeoP54_03365 f2b8edb92285ada5302639f5c27cf735 173 Gene3D G3DSA:3.30.1060.10 4 171 7.1E-70 T 14-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 PhaeoP54_03330 8f926b8f4ff0ea1a884c276f46eb7f90 421 SMART SM00729 140 359 4.8E-51 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 PhaeoP54_03330 8f926b8f4ff0ea1a884c276f46eb7f90 421 Pfam PF04055 Radical SAM superfamily 145 317 2.1E-22 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 PhaeoP54_03330 8f926b8f4ff0ea1a884c276f46eb7f90 421 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 144 164 - T 14-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 PhaeoP54_03330 8f926b8f4ff0ea1a884c276f46eb7f90 421 TIGRFAM TIGR01579 MiaB-like-C: MiaB-like tRNA modifying enzyme 7 399 6.0E-134 T 14-10-2018 IPR006467 MiaB-like tRNA modifying enzyme GO:0016740 PhaeoP54_03330 8f926b8f4ff0ea1a884c276f46eb7f90 421 SUPERFAMILY SSF102114 117 359 4.71E-52 T 14-10-2018 PhaeoP54_03330 8f926b8f4ff0ea1a884c276f46eb7f90 421 Pfam PF00919 Uncharacterized protein family UPF0004 7 90 2.5E-16 T 14-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 PhaeoP54_03330 8f926b8f4ff0ea1a884c276f46eb7f90 421 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 7 410 5.4E-101 T 14-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 PhaeoP54_03330 8f926b8f4ff0ea1a884c276f46eb7f90 421 Gene3D G3DSA:3.80.30.20 138 370 5.1E-70 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe PhaeoP54_03330 8f926b8f4ff0ea1a884c276f46eb7f90 421 Gene3D G3DSA:3.40.50.12160 6 124 4.2E-14 T 14-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily PhaeoP54_03031 9ea80fe1a12a96a2ba2155b28693f42e 92 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 5.8E-19 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PhaeoP54_03031 9ea80fe1a12a96a2ba2155b28693f42e 92 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 5.8E-19 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PhaeoP54_03031 9ea80fe1a12a96a2ba2155b28693f42e 92 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 5.8E-19 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PhaeoP54_03031 9ea80fe1a12a96a2ba2155b28693f42e 92 SUPERFAMILY SSF54570 2 84 8.11E-33 T 14-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PhaeoP54_03031 9ea80fe1a12a96a2ba2155b28693f42e 92 Gene3D G3DSA:3.30.860.10 1 92 1.2E-37 T 14-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PhaeoP54_03031 9ea80fe1a12a96a2ba2155b28693f42e 92 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 23.273 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PhaeoP54_03031 9ea80fe1a12a96a2ba2155b28693f42e 92 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 14-10-2018 IPR020934 Ribosomal protein S19 conserved site GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PhaeoP54_03031 9ea80fe1a12a96a2ba2155b28693f42e 92 PIRSF PIRSF002144 1 92 3.4E-32 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PhaeoP54_03031 9ea80fe1a12a96a2ba2155b28693f42e 92 Pfam PF00203 Ribosomal protein S19 3 83 7.5E-34 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PhaeoP54_03031 9ea80fe1a12a96a2ba2155b28693f42e 92 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 91 4.9E-40 T 14-10-2018 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 PhaeoP54_03763 8f3324a22240b095c5e6dfa56f56d6d7 187 Pfam PF04268 Sarcosine oxidase, gamma subunit family 42 184 3.5E-11 T 14-10-2018 IPR007375 Sarcosine oxidase, gamma subunit KEGG: 00260+1.5.3.1|MetaCyc: PWY-3661|MetaCyc: PWY-4722 PhaeoP54_03763 8f3324a22240b095c5e6dfa56f56d6d7 187 Gene3D G3DSA:3.30.70.1520 33 110 5.7E-19 T 14-10-2018 PhaeoP54_03763 8f3324a22240b095c5e6dfa56f56d6d7 187 SUPERFAMILY SSF103025 70 183 1.51E-10 T 14-10-2018 PhaeoP54_03763 8f3324a22240b095c5e6dfa56f56d6d7 187 Gene3D G3DSA:3.30.1360.120 111 184 5.7E-19 T 14-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 PhaeoP54_01513 ef60e1c39228785250be7803afa7714f 883 Gene3D G3DSA:3.10.310.40 771 883 2.7E-25 T 14-10-2018 PhaeoP54_01513 ef60e1c39228785250be7803afa7714f 883 SUPERFAMILY SSF55681 3 244 1.76E-105 T 14-10-2018 PhaeoP54_01513 ef60e1c39228785250be7803afa7714f 883 Pfam PF02272 DHHA1 domain 741 880 1.4E-21 T 14-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 PhaeoP54_01513 ef60e1c39228785250be7803afa7714f 883 Pfam PF01411 tRNA synthetases class II (A) 6 552 1.1E-219 T 14-10-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 PhaeoP54_01513 ef60e1c39228785250be7803afa7714f 883 Gene3D G3DSA:2.40.30.130 449 547 1.3E-11 T 14-10-2018 PhaeoP54_01513 ef60e1c39228785250be7803afa7714f 883 SUPERFAMILY SSF50447 452 550 5.65E-18 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily PhaeoP54_01513 ef60e1c39228785250be7803afa7714f 883 PRINTS PR00980 Alanyl-tRNA synthetase signature 273 289 4.9E-30 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 PhaeoP54_01513 ef60e1c39228785250be7803afa7714f 883 PRINTS PR00980 Alanyl-tRNA synthetase signature 297 310 4.9E-30 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 PhaeoP54_01513 ef60e1c39228785250be7803afa7714f 883 PRINTS PR00980 Alanyl-tRNA synthetase signature 198 209 4.9E-30 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 PhaeoP54_01513 ef60e1c39228785250be7803afa7714f 883 PRINTS PR00980 Alanyl-tRNA synthetase signature 225 238 4.9E-30 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 PhaeoP54_01513 ef60e1c39228785250be7803afa7714f 883 PRINTS PR00980 Alanyl-tRNA synthetase signature 75 86 4.9E-30 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 PhaeoP54_01513 ef60e1c39228785250be7803afa7714f 883 Gene3D G3DSA:3.30.980.10 561 706 2.5E-45 T 14-10-2018 PhaeoP54_01513 ef60e1c39228785250be7803afa7714f 883 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 651 705 1.4E-17 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 PhaeoP54_01513 ef60e1c39228785250be7803afa7714f 883 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 883 194.086 T 14-10-2018 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 PhaeoP54_01513 ef60e1c39228785250be7803afa7714f 883 Gene3D G3DSA:3.30.930.10 2 240 1.5E-108 T 14-10-2018 PhaeoP54_01513 ef60e1c39228785250be7803afa7714f 883 SUPERFAMILY SSF101353 245 460 5.49E-61 T 14-10-2018 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7 PhaeoP54_01513 ef60e1c39228785250be7803afa7714f 883 SUPERFAMILY SSF55186 550 719 3.53E-45 T 14-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 PhaeoP54_01513 ef60e1c39228785250be7803afa7714f 883 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 6 864 1.8E-294 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 PhaeoP54_01513 ef60e1c39228785250be7803afa7714f 883 SMART SM00863 651 705 8.0E-21 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 PhaeoP54_01513 ef60e1c39228785250be7803afa7714f 883 Gene3D G3DSA:3.30.54.20 622 686 2.5E-45 T 14-10-2018 PhaeoP54_02441 6e9e88e4a4192ac0ba5df9262ab9aa75 507 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 67 402 9.4E-70 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain PhaeoP54_02441 6e9e88e4a4192ac0ba5df9262ab9aa75 507 Gene3D G3DSA:3.10.105.10 251 477 1.3E-98 T 14-10-2018 PhaeoP54_02441 6e9e88e4a4192ac0ba5df9262ab9aa75 507 Gene3D G3DSA:3.40.190.10 59 490 1.3E-98 T 14-10-2018 PhaeoP54_02441 6e9e88e4a4192ac0ba5df9262ab9aa75 507 SUPERFAMILY SSF53850 26 500 2.26E-102 T 14-10-2018 PhaeoP54_02441 6e9e88e4a4192ac0ba5df9262ab9aa75 507 PIRSF PIRSF002741 3 506 6.1E-68 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 PhaeoP54_03574 90950c76fce70fe8d63d975255481b05 455 Pfam PF01979 Amidohydrolase family 47 427 3.0E-30 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 PhaeoP54_03574 90950c76fce70fe8d63d975255481b05 455 SUPERFAMILY SSF51338 343 452 1.3E-9 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 PhaeoP54_03574 90950c76fce70fe8d63d975255481b05 455 SUPERFAMILY SSF51556 49 375 2.27E-63 T 14-10-2018 IPR032466 Metal-dependent hydrolase PhaeoP54_03574 90950c76fce70fe8d63d975255481b05 455 Gene3D G3DSA:2.30.40.10 9 432 2.7E-172 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 PhaeoP54_03574 90950c76fce70fe8d63d975255481b05 455 Gene3D G3DSA:3.20.20.140 51 444 2.7E-172 T 14-10-2018 PhaeoP54_03574 90950c76fce70fe8d63d975255481b05 455 TIGRFAM TIGR02022 hutF: formiminoglutamate deiminase 1 452 5.6E-172 T 14-10-2018 IPR010252 Formiminoglutamate deiminase PhaeoP54_03744 250dd270eab460b9ce60b70bfa0c7698 146 Pfam PF07883 Cupin domain 41 103 6.8E-14 T 14-10-2018 IPR013096 Cupin 2, conserved barrel PhaeoP54_03744 250dd270eab460b9ce60b70bfa0c7698 146 SUPERFAMILY SSF51182 12 120 7.01E-22 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily PhaeoP54_03744 250dd270eab460b9ce60b70bfa0c7698 146 SMART SM00835 3 130 0.0016 T 14-10-2018 IPR006045 Cupin 1 GO:0045735 PhaeoP54_03744 250dd270eab460b9ce60b70bfa0c7698 146 Gene3D G3DSA:2.60.120.10 8 143 2.1E-20 T 14-10-2018 IPR014710 RmlC-like jelly roll fold PhaeoP54_02356 18dbbdcad1d49be373ee5c03abb2d03a 82 Pfam PF04380 Membrane fusogenic activity 2 78 4.6E-26 T 14-10-2018 IPR007475 Membrane fusogenic activity PhaeoP54_02636 ffd8a421f3c9b33d0a719f5f71f7681d 408 Gene3D G3DSA:3.40.190.10 31 400 2.6E-45 T 14-10-2018 PhaeoP54_02636 ffd8a421f3c9b33d0a719f5f71f7681d 408 Pfam PF13416 Bacterial extracellular solute-binding protein 43 323 2.2E-23 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein PhaeoP54_02636 ffd8a421f3c9b33d0a719f5f71f7681d 408 SUPERFAMILY SSF53850 29 404 1.39E-50 T 14-10-2018 PhaeoP54_02074 dd18b6e67739aa321916fc9a1632594f 460 Gene3D G3DSA:2.150.10.10 365 416 1.3E-7 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal PhaeoP54_02074 dd18b6e67739aa321916fc9a1632594f 460 Gene3D G3DSA:2.150.10.10 253 364 8.3E-54 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal PhaeoP54_02074 dd18b6e67739aa321916fc9a1632594f 460 SUPERFAMILY SSF51120 253 445 1.12E-25 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal PhaeoP54_02074 dd18b6e67739aa321916fc9a1632594f 460 SUPERFAMILY SSF55486 79 249 1.85E-26 T 14-10-2018 PhaeoP54_02074 dd18b6e67739aa321916fc9a1632594f 460 PRINTS PR00313 NodO calcium binding signature 366 374 5.0E-8 T 14-10-2018 PhaeoP54_02074 dd18b6e67739aa321916fc9a1632594f 460 PRINTS PR00313 NodO calcium binding signature 318 329 5.0E-8 T 14-10-2018 PhaeoP54_02074 dd18b6e67739aa321916fc9a1632594f 460 PRINTS PR00313 NodO calcium binding signature 339 347 5.0E-8 T 14-10-2018 PhaeoP54_02074 dd18b6e67739aa321916fc9a1632594f 460 PRINTS PR00313 NodO calcium binding signature 384 393 5.0E-8 T 14-10-2018 PhaeoP54_02074 dd18b6e67739aa321916fc9a1632594f 460 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 353 371 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site PhaeoP54_02074 dd18b6e67739aa321916fc9a1632594f 460 Gene3D G3DSA:3.40.390.10 79 252 8.3E-54 T 14-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 PhaeoP54_02074 dd18b6e67739aa321916fc9a1632594f 460 SMART SM00235 72 244 1.1E-5 T 14-10-2018 IPR006026 Peptidase, metallopeptidase GO:0006508|GO:0008237|GO:0008270 PhaeoP54_02074 dd18b6e67739aa321916fc9a1632594f 460 Pfam PF08548 Peptidase M10 serralysin C terminal 264 413 3.2E-14 T 14-10-2018 IPR013858 Peptidase M10 serralysin, C-terminal GO:0005509|GO:0005615 PhaeoP54_02609 3940035d51b9f9019eb3daf5319c1fbe 181 Pfam PF04542 Sigma-70 region 2 10 74 2.2E-15 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 PhaeoP54_02609 3940035d51b9f9019eb3daf5319c1fbe 181 SUPERFAMILY SSF88659 97 156 4.8E-14 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like PhaeoP54_02609 3940035d51b9f9019eb3daf5319c1fbe 181 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 29 60 - T 14-10-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PhaeoP54_02609 3940035d51b9f9019eb3daf5319c1fbe 181 Gene3D G3DSA:1.10.1740.10 3 77 1.6E-23 T 14-10-2018 PhaeoP54_02609 3940035d51b9f9019eb3daf5319c1fbe 181 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 6 155 7.9E-26 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 PhaeoP54_02609 3940035d51b9f9019eb3daf5319c1fbe 181 SUPERFAMILY SSF88946 9 87 2.28E-22 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 PhaeoP54_02609 3940035d51b9f9019eb3daf5319c1fbe 181 Gene3D G3DSA:1.10.10.10 95 161 2.6E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_02609 3940035d51b9f9019eb3daf5319c1fbe 181 Pfam PF08281 Sigma-70, region 4 103 152 2.8E-13 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PhaeoP54_03495 6e33e939c1dd7f6ed12754663a667a91 433 Gene3D G3DSA:2.60.98.20 167 279 2.1E-7 T 14-10-2018 IPR037058 Flagellar hook protein FlgE superfamily PhaeoP54_03495 6e33e939c1dd7f6ed12754663a667a91 433 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 13 33 - T 14-10-2018 IPR019776 Flagellar basal body rod protein, conserved site PhaeoP54_03495 6e33e939c1dd7f6ed12754663a667a91 433 Pfam PF00460 Flagella basal body rod protein 7 37 2.4E-6 T 14-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 PhaeoP54_03495 6e33e939c1dd7f6ed12754663a667a91 433 SUPERFAMILY SSF117143 81 393 3.27E-57 T 14-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like PhaeoP54_03495 6e33e939c1dd7f6ed12754663a667a91 433 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 6 414 1.8E-73 T 14-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G PhaeoP54_03495 6e33e939c1dd7f6ed12754663a667a91 433 Pfam PF07559 Flagellar basal body protein FlaE 192 312 1.0E-8 T 14-10-2018 IPR011491 Flagellar hook protein FlgE PhaeoP54_03495 6e33e939c1dd7f6ed12754663a667a91 433 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 378 430 3.6E-14 T 14-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain PhaeoP54_00307 00b1eb11152520436633534728b4e299 255 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 118 124 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 PhaeoP54_00307 00b1eb11152520436633534728b4e299 255 Gene3D G3DSA:3.40.50.150 10 247 1.0E-47 T 14-10-2018 PhaeoP54_00307 00b1eb11152520436633534728b4e299 255 Pfam PF05175 Methyltransferase small domain 36 131 4.2E-12 T 14-10-2018 IPR007848 Methyltransferase small domain GO:0008168 PhaeoP54_00307 00b1eb11152520436633534728b4e299 255 SUPERFAMILY SSF53335 33 193 2.71E-28 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PhaeoP54_00432 2d9940b77c9ee4d471da5dd7e15d20fd 229 Pfam PF12697 Alpha/beta hydrolase family 3 219 2.1E-14 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 PhaeoP54_00432 2d9940b77c9ee4d471da5dd7e15d20fd 229 Gene3D G3DSA:3.40.50.1820 1 226 1.0E-49 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold PhaeoP54_00432 2d9940b77c9ee4d471da5dd7e15d20fd 229 SUPERFAMILY SSF53474 2 216 2.84E-33 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold PhaeoP54_02129 0a15747baf02dfdd2aa71966938bd906 278 SUPERFAMILY SSF53649 2 264 1.8E-39 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 PhaeoP54_02129 0a15747baf02dfdd2aa71966938bd906 278 Gene3D G3DSA:3.40.720.10 2 105 3.3E-7 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 PhaeoP54_02129 0a15747baf02dfdd2aa71966938bd906 278 Gene3D G3DSA:3.40.720.10 135 278 2.9E-14 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 PhaeoP54_02129 0a15747baf02dfdd2aa71966938bd906 278 Pfam PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase 5 86 5.0E-9 T 14-10-2018 IPR002591 Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase GO:0003824 PhaeoP54_01716 5fb717064e403ab5b0f972d62f7b59cb 276 Pfam PF12680 SnoaL-like domain 38 125 5.0E-9 T 14-10-2018 IPR037401 SnoaL-like domain PhaeoP54_01716 5fb717064e403ab5b0f972d62f7b59cb 276 Pfam PF12680 SnoaL-like domain 167 258 1.0E-9 T 14-10-2018 IPR037401 SnoaL-like domain PhaeoP54_01716 5fb717064e403ab5b0f972d62f7b59cb 276 SUPERFAMILY SSF54427 155 274 3.44E-17 T 14-10-2018 IPR032710 NTF2-like domain superfamily PhaeoP54_01716 5fb717064e403ab5b0f972d62f7b59cb 276 Gene3D G3DSA:3.10.450.50 152 276 9.0E-29 T 14-10-2018 PhaeoP54_01716 5fb717064e403ab5b0f972d62f7b59cb 276 Gene3D G3DSA:3.10.450.50 23 143 1.7E-25 T 14-10-2018 PhaeoP54_01716 5fb717064e403ab5b0f972d62f7b59cb 276 SUPERFAMILY SSF54427 26 130 5.85E-20 T 14-10-2018 IPR032710 NTF2-like domain superfamily PhaeoP54_01556 1d7f62161815be7a679ddff731fade64 257 SUPERFAMILY SSF51735 1 227 8.0E-53 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PhaeoP54_01556 1d7f62161815be7a679ddff731fade64 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 149 168 6.1E-21 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_01556 1d7f62161815be7a679ddff731fade64 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 170 187 6.1E-21 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_01556 1d7f62161815be7a679ddff731fade64 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 77 88 6.1E-21 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_01556 1d7f62161815be7a679ddff731fade64 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 123 139 6.1E-21 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_01556 1d7f62161815be7a679ddff731fade64 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 6.1E-21 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_01556 1d7f62161815be7a679ddff731fade64 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 77 88 2.8E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_01556 1d7f62161815be7a679ddff731fade64 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 129 137 2.8E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_01556 1d7f62161815be7a679ddff731fade64 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 149 168 2.8E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_01556 1d7f62161815be7a679ddff731fade64 257 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 136 164 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 PhaeoP54_01556 1d7f62161815be7a679ddff731fade64 257 Pfam PF00106 short chain dehydrogenase 6 190 1.2E-35 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_01556 1d7f62161815be7a679ddff731fade64 257 Gene3D G3DSA:3.40.50.720 1 249 9.8E-54 T 14-10-2018 PhaeoP54_03564 8e3c1c8ff34c18e80ff1a2ba8b7e65d9 413 Pfam PF00413 Matrixin 112 195 2.3E-5 T 14-10-2018 IPR001818 Peptidase M10, metallopeptidase GO:0004222|GO:0006508|GO:0008270|GO:0031012 PhaeoP54_03564 8e3c1c8ff34c18e80ff1a2ba8b7e65d9 413 SUPERFAMILY SSF55486 16 194 1.1E-28 T 14-10-2018 PhaeoP54_03564 8e3c1c8ff34c18e80ff1a2ba8b7e65d9 413 PRINTS PR00313 NodO calcium binding signature 334 343 5.0E-11 T 14-10-2018 PhaeoP54_03564 8e3c1c8ff34c18e80ff1a2ba8b7e65d9 413 PRINTS PR00313 NodO calcium binding signature 304 315 5.0E-11 T 14-10-2018 PhaeoP54_03564 8e3c1c8ff34c18e80ff1a2ba8b7e65d9 413 PRINTS PR00313 NodO calcium binding signature 316 324 5.0E-11 T 14-10-2018 PhaeoP54_03564 8e3c1c8ff34c18e80ff1a2ba8b7e65d9 413 PRINTS PR00313 NodO calcium binding signature 325 333 5.0E-11 T 14-10-2018 PhaeoP54_03564 8e3c1c8ff34c18e80ff1a2ba8b7e65d9 413 SUPERFAMILY SSF51120 195 294 3.27E-14 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal PhaeoP54_03564 8e3c1c8ff34c18e80ff1a2ba8b7e65d9 413 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 312 330 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site PhaeoP54_03564 8e3c1c8ff34c18e80ff1a2ba8b7e65d9 413 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 306 323 0.034 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_03564 8e3c1c8ff34c18e80ff1a2ba8b7e65d9 413 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 253 269 0.59 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_03564 8e3c1c8ff34c18e80ff1a2ba8b7e65d9 413 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 324 341 0.011 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_03564 8e3c1c8ff34c18e80ff1a2ba8b7e65d9 413 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 289 305 0.028 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_03564 8e3c1c8ff34c18e80ff1a2ba8b7e65d9 413 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 270 285 2.7 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_03564 8e3c1c8ff34c18e80ff1a2ba8b7e65d9 413 SMART SM00235 17 189 6.0E-5 T 14-10-2018 IPR006026 Peptidase, metallopeptidase GO:0006508|GO:0008237|GO:0008270 PhaeoP54_03564 8e3c1c8ff34c18e80ff1a2ba8b7e65d9 413 Gene3D G3DSA:3.40.390.10 6 196 1.9E-33 T 14-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 PhaeoP54_03564 8e3c1c8ff34c18e80ff1a2ba8b7e65d9 413 SUPERFAMILY SSF51120 270 392 1.7E-26 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal PhaeoP54_03564 8e3c1c8ff34c18e80ff1a2ba8b7e65d9 413 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 303 321 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site PhaeoP54_03564 8e3c1c8ff34c18e80ff1a2ba8b7e65d9 413 Gene3D G3DSA:2.150.10.10 288 413 4.9E-26 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal PhaeoP54_03564 8e3c1c8ff34c18e80ff1a2ba8b7e65d9 413 Gene3D G3DSA:2.150.10.10 216 287 5.1E-12 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal PhaeoP54_03564 8e3c1c8ff34c18e80ff1a2ba8b7e65d9 413 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 321 339 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site PhaeoP54_02754 9c004bd25ec969da4c52b570af7dbc2a 288 Pfam PF13602 Zinc-binding dehydrogenase 177 283 1.1E-13 T 14-10-2018 PhaeoP54_02754 9c004bd25ec969da4c52b570af7dbc2a 288 Gene3D G3DSA:3.90.180.10 235 282 2.6E-13 T 14-10-2018 PhaeoP54_02754 9c004bd25ec969da4c52b570af7dbc2a 288 Gene3D G3DSA:3.90.180.10 9 129 1.6E-43 T 14-10-2018 PhaeoP54_02754 9c004bd25ec969da4c52b570af7dbc2a 288 Gene3D G3DSA:3.40.50.720 130 172 1.6E-43 T 14-10-2018 PhaeoP54_02754 9c004bd25ec969da4c52b570af7dbc2a 288 Gene3D G3DSA:3.40.50.720 180 234 2.6E-13 T 14-10-2018 PhaeoP54_02754 9c004bd25ec969da4c52b570af7dbc2a 288 SUPERFAMILY SSF50129 1 151 1.07E-34 T 14-10-2018 IPR011032 GroES-like superfamily PhaeoP54_02754 9c004bd25ec969da4c52b570af7dbc2a 288 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 89 2.9E-8 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 PhaeoP54_02754 9c004bd25ec969da4c52b570af7dbc2a 288 SMART SM00829 10 283 1.1E-9 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 PhaeoP54_02754 9c004bd25ec969da4c52b570af7dbc2a 288 SUPERFAMILY SSF51735 120 256 4.55E-10 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PhaeoP54_01189 0b8ad5b42d47fda814de0454915bc3a9 133 SUPERFAMILY SSF46955 7 116 1.76E-24 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily PhaeoP54_01189 0b8ad5b42d47fda814de0454915bc3a9 133 SMART SM00422 7 73 4.9E-17 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PhaeoP54_01189 0b8ad5b42d47fda814de0454915bc3a9 133 Gene3D G3DSA:1.10.1660.10 6 133 3.8E-26 T 14-10-2018 PhaeoP54_01189 0b8ad5b42d47fda814de0454915bc3a9 133 Pfam PF09278 MerR, DNA binding 48 113 4.7E-15 T 14-10-2018 IPR015358 Transcription regulator MerR, DNA binding PhaeoP54_01189 0b8ad5b42d47fda814de0454915bc3a9 133 Pfam PF00376 MerR family regulatory protein 7 41 3.1E-9 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PhaeoP54_02905 56c25e3235353fbaced94d05c5dc1285 242 Pfam PF02433 Cytochrome C oxidase, mono-heme subunit/FixO 7 231 2.8E-94 T 14-10-2018 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO PhaeoP54_02905 56c25e3235353fbaced94d05c5dc1285 242 TIGRFAM TIGR00781 ccoO: cytochrome c oxidase, cbb3-type, subunit II 7 238 7.6E-113 T 14-10-2018 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO PhaeoP54_02905 56c25e3235353fbaced94d05c5dc1285 242 SUPERFAMILY SSF46626 19 227 6.89E-28 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PhaeoP54_02905 56c25e3235353fbaced94d05c5dc1285 242 Gene3D G3DSA:1.10.760.10 44 235 1.9E-63 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PhaeoP54_02073 be0df5c420a29c0890632b2e5ec9e7e7 510 Gene3D G3DSA:3.90.226.10 257 510 8.3E-92 T 14-10-2018 PhaeoP54_02073 be0df5c420a29c0890632b2e5ec9e7e7 510 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 93 107 9.6E-5 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 PhaeoP54_02073 be0df5c420a29c0890632b2e5ec9e7e7 510 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 163 180 9.6E-5 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 PhaeoP54_02073 be0df5c420a29c0890632b2e5ec9e7e7 510 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 127 145 9.6E-5 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 PhaeoP54_02073 be0df5c420a29c0890632b2e5ec9e7e7 510 Pfam PF01039 Carboxyl transferase domain 27 508 9.9E-194 T 14-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 PhaeoP54_02073 be0df5c420a29c0890632b2e5ec9e7e7 510 SUPERFAMILY SSF52096 3 249 8.35E-81 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily PhaeoP54_02073 be0df5c420a29c0890632b2e5ec9e7e7 510 SUPERFAMILY SSF52096 223 510 2.79E-86 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily PhaeoP54_02073 be0df5c420a29c0890632b2e5ec9e7e7 510 Gene3D G3DSA:3.90.226.10 1 256 1.4E-99 T 14-10-2018 PhaeoP54_01609 cdcd75174784fa0a95bf69e798b9e7d5 223 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 15 192 1.0E-44 T 14-10-2018 IPR001303 Class II aldolase/adducin N-terminal PhaeoP54_01609 cdcd75174784fa0a95bf69e798b9e7d5 223 SMART SM01007 14 192 2.1E-57 T 14-10-2018 IPR001303 Class II aldolase/adducin N-terminal PhaeoP54_01609 cdcd75174784fa0a95bf69e798b9e7d5 223 SUPERFAMILY SSF53639 11 220 1.35E-59 T 14-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily PhaeoP54_01609 cdcd75174784fa0a95bf69e798b9e7d5 223 Gene3D G3DSA:3.40.225.10 8 223 2.0E-66 T 14-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily PhaeoP54_03769 fcee4de159eee473b7206758dcf0b424 590 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 161 270 1.3E-15 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 PhaeoP54_03769 fcee4de159eee473b7206758dcf0b424 590 Gene3D G3DSA:1.20.140.10 286 453 4.6E-48 T 14-10-2018 PhaeoP54_03769 fcee4de159eee473b7206758dcf0b424 590 SUPERFAMILY SSF47203 278 452 1.37E-43 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 PhaeoP54_03769 fcee4de159eee473b7206758dcf0b424 590 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 464 585 1.6E-26 T 14-10-2018 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain PhaeoP54_03769 fcee4de159eee473b7206758dcf0b424 590 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 37 155 2.1E-11 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 PhaeoP54_03769 fcee4de159eee473b7206758dcf0b424 590 Gene3D G3DSA:2.40.110.10 159 285 1.9E-28 T 14-10-2018 PhaeoP54_03769 fcee4de159eee473b7206758dcf0b424 590 SUPERFAMILY SSF56645 36 278 1.83E-57 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 PhaeoP54_03769 fcee4de159eee473b7206758dcf0b424 590 Gene3D G3DSA:1.10.540.10 34 158 1.6E-15 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 PhaeoP54_03769 fcee4de159eee473b7206758dcf0b424 590 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 280 445 1.9E-28 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PhaeoP54_00969 224de49d8fb34b3c987823de331b26dd 250 SUPERFAMILY SSF51735 1 250 3.84E-68 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PhaeoP54_00969 224de49d8fb34b3c987823de331b26dd 250 Gene3D G3DSA:3.40.50.720 1 250 8.2E-71 T 14-10-2018 PhaeoP54_00969 224de49d8fb34b3c987823de331b26dd 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 148 167 3.4E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_00969 224de49d8fb34b3c987823de331b26dd 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 75 86 3.4E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_00969 224de49d8fb34b3c987823de331b26dd 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 128 136 3.4E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_00969 224de49d8fb34b3c987823de331b26dd 250 Pfam PF00106 short chain dehydrogenase 6 186 1.9E-47 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_00969 224de49d8fb34b3c987823de331b26dd 250 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 135 163 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 PhaeoP54_00969 224de49d8fb34b3c987823de331b26dd 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 169 186 1.7E-30 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_00969 224de49d8fb34b3c987823de331b26dd 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 75 86 1.7E-30 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_00969 224de49d8fb34b3c987823de331b26dd 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 122 138 1.7E-30 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_00969 224de49d8fb34b3c987823de331b26dd 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 213 233 1.7E-30 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_00969 224de49d8fb34b3c987823de331b26dd 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 1.7E-30 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_00969 224de49d8fb34b3c987823de331b26dd 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 148 167 1.7E-30 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_01199 d0a6220f4d21ab890bac25e9f2215c71 163 SUPERFAMILY SSF46785 9 146 7.74E-30 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_01199 d0a6220f4d21ab890bac25e9f2215c71 163 Pfam PF01047 MarR family 38 95 3.7E-10 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PhaeoP54_01199 d0a6220f4d21ab890bac25e9f2215c71 163 PRINTS PR00598 Bacterial regulatory protein MarR family signature 55 71 1.2E-12 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PhaeoP54_01199 d0a6220f4d21ab890bac25e9f2215c71 163 PRINTS PR00598 Bacterial regulatory protein MarR family signature 121 141 1.2E-12 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PhaeoP54_01199 d0a6220f4d21ab890bac25e9f2215c71 163 PRINTS PR00598 Bacterial regulatory protein MarR family signature 91 107 1.2E-12 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PhaeoP54_01199 d0a6220f4d21ab890bac25e9f2215c71 163 PRINTS PR00598 Bacterial regulatory protein MarR family signature 72 87 1.2E-12 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PhaeoP54_01199 d0a6220f4d21ab890bac25e9f2215c71 163 Gene3D G3DSA:1.10.10.10 4 155 1.0E-32 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_01199 d0a6220f4d21ab890bac25e9f2215c71 163 SMART SM00347 31 131 9.1E-21 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PhaeoP54_02654 6da406742ae5809392577005a3498fec 429 Pfam PF01593 Flavin containing amine oxidoreductase 20 282 5.8E-22 T 14-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 PhaeoP54_02654 6da406742ae5809392577005a3498fec 429 SUPERFAMILY SSF51905 12 421 1.12E-55 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PhaeoP54_02654 6da406742ae5809392577005a3498fec 429 Gene3D G3DSA:3.50.50.60 218 287 4.6E-6 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PhaeoP54_02654 6da406742ae5809392577005a3498fec 429 Gene3D G3DSA:3.30.9.10 288 335 4.6E-6 T 14-10-2018 PhaeoP54_02654 6da406742ae5809392577005a3498fec 429 Gene3D G3DSA:3.50.50.60 7 101 1.9E-15 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PhaeoP54_02935 172e1728d19ef592748d84411ede3066 152 SUPERFAMILY SSF54909 63 152 6.17E-22 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel PhaeoP54_02935 172e1728d19ef592748d84411ede3066 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 19 30 6.8E-16 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 PhaeoP54_02935 172e1728d19ef592748d84411ede3066 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 30 49 6.8E-16 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 PhaeoP54_02935 172e1728d19ef592748d84411ede3066 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 3 19 6.8E-16 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 PhaeoP54_02935 172e1728d19ef592748d84411ede3066 152 SUPERFAMILY SSF46785 2 93 4.06E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_02935 172e1728d19ef592748d84411ede3066 152 Pfam PF01037 Lrp/AsnC ligand binding domain 69 143 4.3E-23 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain PhaeoP54_02935 172e1728d19ef592748d84411ede3066 152 SMART SM00344 3 112 4.1E-45 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 PhaeoP54_02935 172e1728d19ef592748d84411ede3066 152 ProSitePatterns PS00519 AsnC-type HTH domain signature. 21 47 - T 14-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site PhaeoP54_02935 172e1728d19ef592748d84411ede3066 152 Gene3D G3DSA:1.10.10.10 4 55 2.4E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_02935 172e1728d19ef592748d84411ede3066 152 Gene3D G3DSA:3.30.70.920 56 140 8.8E-27 T 14-10-2018 PhaeoP54_02935 172e1728d19ef592748d84411ede3066 152 Pfam PF13412 Winged helix-turn-helix DNA-binding 3 50 9.0E-22 T 14-10-2018 PhaeoP54_03049 3dc5e2dcfe85f84a080a47124dbe52b7 311 SUPERFAMILY SSF47616 171 308 4.59E-30 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily PhaeoP54_03049 3dc5e2dcfe85f84a080a47124dbe52b7 311 Pfam PF13410 Glutathione S-transferase, C-terminal domain 198 266 4.8E-13 T 14-10-2018 PhaeoP54_03049 3dc5e2dcfe85f84a080a47124dbe52b7 311 Gene3D G3DSA:3.40.30.130 22 308 5.0E-126 T 14-10-2018 PhaeoP54_03049 3dc5e2dcfe85f84a080a47124dbe52b7 311 Gene3D G3DSA:1.20.1050.10 168 278 5.0E-126 T 14-10-2018 PhaeoP54_03049 3dc5e2dcfe85f84a080a47124dbe52b7 311 PIRSF PIRSF015753 7 311 7.9E-123 T 14-10-2018 IPR016639 Glutathione S-transferase Omega/GSH GO:0004364 PhaeoP54_03049 3dc5e2dcfe85f84a080a47124dbe52b7 311 Pfam PF13409 Glutathione S-transferase, N-terminal domain 57 152 1.1E-22 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 PhaeoP54_03049 3dc5e2dcfe85f84a080a47124dbe52b7 311 SUPERFAMILY SSF52833 32 154 5.36E-15 T 14-10-2018 IPR036249 Thioredoxin-like superfamily PhaeoP54_01756 1dd78265dea732e9aac5dcefacae4171 251 SUPERFAMILY SSF57184 73 216 2.88E-5 T 14-10-2018 IPR009030 Growth factor receptor cysteine-rich domain superfamily PhaeoP54_01756 1dd78265dea732e9aac5dcefacae4171 251 Gene3D G3DSA:2.10.25.10 52 86 5.6E-8 T 14-10-2018 PhaeoP54_01756 1dd78265dea732e9aac5dcefacae4171 251 Gene3D G3DSA:2.10.25.10 87 122 2.8E-7 T 14-10-2018 PhaeoP54_01756 1dd78265dea732e9aac5dcefacae4171 251 Gene3D G3DSA:2.10.25.10 211 251 3.2E-8 T 14-10-2018 PhaeoP54_01756 1dd78265dea732e9aac5dcefacae4171 251 Gene3D G3DSA:2.10.25.10 147 187 5.9E-6 T 14-10-2018 PhaeoP54_03505 836e225aecb685a70931865e09e99e66 215 SUPERFAMILY SSF158791 130 205 1.22E-7 T 14-10-2018 PhaeoP54_00713 df1f02918993588f884a535a0dbf41d1 315 SUPERFAMILY SSF53474 15 313 1.1E-35 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold PhaeoP54_00713 df1f02918993588f884a535a0dbf41d1 315 Pfam PF12146 Serine aminopeptidase, S33 42 294 9.6E-39 T 14-10-2018 IPR022742 Serine aminopeptidase, S33 PhaeoP54_00713 df1f02918993588f884a535a0dbf41d1 315 Gene3D G3DSA:3.40.50.1820 16 313 3.6E-45 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold PhaeoP54_02446 8339a0a2db49b556fb1964788ff0c347 260 Gene3D G3DSA:3.40.50.300 16 260 1.0E-75 T 14-10-2018 PhaeoP54_02446 8339a0a2db49b556fb1964788ff0c347 260 SMART SM00382 44 231 6.7E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_02446 8339a0a2db49b556fb1964788ff0c347 260 ProSitePatterns PS00211 ABC transporters family signature. 155 169 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PhaeoP54_02446 8339a0a2db49b556fb1964788ff0c347 260 SUPERFAMILY SSF52540 19 253 1.9E-77 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_02446 8339a0a2db49b556fb1964788ff0c347 260 PIRSF PIRSF039085 16 259 9.6E-107 T 14-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 PhaeoP54_02446 8339a0a2db49b556fb1964788ff0c347 260 Pfam PF00005 ABC transporter 35 183 1.2E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PhaeoP54_00774 7745b0f391347dae9a2294eeaf38790a 254 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 6 216 6.3E-39 T 14-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 PhaeoP54_00774 7745b0f391347dae9a2294eeaf38790a 254 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 8 22 - T 14-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 PhaeoP54_00774 7745b0f391347dae9a2294eeaf38790a 254 SUPERFAMILY SSF53790 1 238 1.83E-64 T 14-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 PhaeoP54_00774 7745b0f391347dae9a2294eeaf38790a 254 Gene3D G3DSA:3.30.950.10 119 247 1.7E-28 T 14-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 PhaeoP54_00774 7745b0f391347dae9a2294eeaf38790a 254 Gene3D G3DSA:3.40.1010.10 1 118 6.7E-35 T 14-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 PhaeoP54_00774 7745b0f391347dae9a2294eeaf38790a 254 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 83 116 - T 14-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 PhaeoP54_00774 7745b0f391347dae9a2294eeaf38790a 254 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 3 236 2.4E-69 T 14-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 PhaeoP54_02578 9dc19f50ba8441df6c2fef807585de6b 68 Gene3D G3DSA:2.40.50.140 1 65 3.8E-24 T 14-10-2018 PhaeoP54_02578 9dc19f50ba8441df6c2fef807585de6b 68 PRINTS PR00050 Cold shock protein signature 4 19 8.4E-14 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 PhaeoP54_02578 9dc19f50ba8441df6c2fef807585de6b 68 PRINTS PR00050 Cold shock protein signature 40 58 8.4E-14 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 PhaeoP54_02578 9dc19f50ba8441df6c2fef807585de6b 68 PRINTS PR00050 Cold shock protein signature 25 34 8.4E-14 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 PhaeoP54_02578 9dc19f50ba8441df6c2fef807585de6b 68 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 14-10-2018 IPR019844 Cold-shock conserved site PhaeoP54_02578 9dc19f50ba8441df6c2fef807585de6b 68 SMART SM00357 3 67 6.4E-22 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 PhaeoP54_02578 9dc19f50ba8441df6c2fef807585de6b 68 Pfam PF00313 'Cold-shock' DNA-binding domain 3 62 2.5E-23 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 PhaeoP54_02578 9dc19f50ba8441df6c2fef807585de6b 68 SUPERFAMILY SSF50249 1 61 2.08E-21 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold PhaeoP54_02578 9dc19f50ba8441df6c2fef807585de6b 68 PIRSF PIRSF002599 1 67 2.5E-22 T 14-10-2018 IPR012156 Cold shock, CspA GO:0003676 PhaeoP54_03563 ab61126ed7d1eb7484dc99cbccba0e1b 394 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 22 378 3.2E-120 T 14-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 PhaeoP54_03563 ab61126ed7d1eb7484dc99cbccba0e1b 394 PIRSF PIRSF006004 17 390 2.9E-144 T 14-10-2018 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 PhaeoP54_03563 ab61126ed7d1eb7484dc99cbccba0e1b 394 Pfam PF04055 Radical SAM superfamily 131 308 8.7E-18 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 PhaeoP54_03563 ab61126ed7d1eb7484dc99cbccba0e1b 394 Gene3D G3DSA:3.20.20.70 89 363 2.0E-104 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PhaeoP54_03563 ab61126ed7d1eb7484dc99cbccba0e1b 394 SUPERFAMILY SSF102114 124 337 1.57E-14 T 14-10-2018 PhaeoP54_03563 ab61126ed7d1eb7484dc99cbccba0e1b 394 Gene3D G3DSA:1.10.150.530 8 88 2.3E-15 T 14-10-2018 PhaeoP54_03563 ab61126ed7d1eb7484dc99cbccba0e1b 394 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 23 378 71.625 T 14-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 PhaeoP54_01018 5438b0aa292ded08c9b950d8fd0d5526 345 ProSitePatterns PS00668 Respiratory-chain NADH dehydrogenase subunit 1 signature 2. 217 230 - T 14-10-2018 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PhaeoP54_01018 5438b0aa292ded08c9b950d8fd0d5526 345 ProSitePatterns PS00667 Respiratory-chain NADH dehydrogenase subunit 1 signature 1. 57 72 - T 14-10-2018 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PhaeoP54_01018 5438b0aa292ded08c9b950d8fd0d5526 345 Hamap MF_01350 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic [ndhA]. 11 332 23.932 T 14-10-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PhaeoP54_01018 5438b0aa292ded08c9b950d8fd0d5526 345 Pfam PF00146 NADH dehydrogenase 18 325 9.9E-121 T 14-10-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PhaeoP54_01683 18a9480d8e7f2788e107418e4ecc3b42 258 Gene3D G3DSA:3.90.226.10 1 197 3.2E-60 T 14-10-2018 PhaeoP54_01683 18a9480d8e7f2788e107418e4ecc3b42 258 Pfam PF00378 Enoyl-CoA hydratase/isomerase 11 257 1.4E-69 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 PhaeoP54_01683 18a9480d8e7f2788e107418e4ecc3b42 258 SUPERFAMILY SSF52096 1 258 7.54E-78 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily PhaeoP54_01683 18a9480d8e7f2788e107418e4ecc3b42 258 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 99 119 - T 14-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 PhaeoP54_01683 18a9480d8e7f2788e107418e4ecc3b42 258 Gene3D G3DSA:1.10.12.10 201 258 1.1E-21 T 14-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal PhaeoP54_00286 e5d5217e4ed6ed3aab80d5a0ee6e6b7f 568 SUPERFAMILY SSF47203 286 454 1.93E-43 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 PhaeoP54_00286 e5d5217e4ed6ed3aab80d5a0ee6e6b7f 568 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 280 436 3.5E-26 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PhaeoP54_00286 e5d5217e4ed6ed3aab80d5a0ee6e6b7f 568 Gene3D G3DSA:1.10.540.10 44 158 2.3E-100 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 PhaeoP54_00286 e5d5217e4ed6ed3aab80d5a0ee6e6b7f 568 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 451 557 4.3E-13 T 14-10-2018 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain PhaeoP54_00286 e5d5217e4ed6ed3aab80d5a0ee6e6b7f 568 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 161 269 9.2E-17 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 PhaeoP54_00286 e5d5217e4ed6ed3aab80d5a0ee6e6b7f 568 Gene3D G3DSA:2.40.110.10 159 279 2.3E-100 T 14-10-2018 PhaeoP54_00286 e5d5217e4ed6ed3aab80d5a0ee6e6b7f 568 SUPERFAMILY SSF56645 37 277 2.09E-57 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 PhaeoP54_00286 e5d5217e4ed6ed3aab80d5a0ee6e6b7f 568 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 39 156 1.7E-13 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 PhaeoP54_00286 e5d5217e4ed6ed3aab80d5a0ee6e6b7f 568 Gene3D G3DSA:1.20.140.10 280 434 2.3E-100 T 14-10-2018 PhaeoP54_02639 317d71c8de97628ac1a3d3d289d3b9ec 178 Gene3D G3DSA:3.10.450.50 22 163 2.7E-36 T 14-10-2018 PhaeoP54_02639 317d71c8de97628ac1a3d3d289d3b9ec 178 Pfam PF07366 SnoaL-like polyketide cyclase 26 151 3.4E-20 T 14-10-2018 IPR009959 Polyketide cyclase SnoaL-like GO:0030638 MetaCyc: PWY-7352|MetaCyc: PWY-7354 PhaeoP54_02639 317d71c8de97628ac1a3d3d289d3b9ec 178 SUPERFAMILY SSF54427 21 156 4.28E-36 T 14-10-2018 IPR032710 NTF2-like domain superfamily PhaeoP54_02722 ad86ce7fa7dd9ae6d81072c56a1cced5 203 Pfam PF01066 CDP-alcohol phosphatidyltransferase 27 89 1.1E-10 T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 PhaeoP54_02722 ad86ce7fa7dd9ae6d81072c56a1cced5 203 Gene3D G3DSA:1.20.120.1760 6 200 8.3E-21 T 14-10-2018 PhaeoP54_02722 ad86ce7fa7dd9ae6d81072c56a1cced5 203 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 68 89 - T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 PhaeoP54_00295 31369a7fa365195ef485d4f686ce1033 163 Gene3D G3DSA:2.20.25.120 47 79 1.9E-55 T 14-10-2018 PhaeoP54_00295 31369a7fa365195ef485d4f686ce1033 163 SUPERFAMILY SSF52540 1 158 1.88E-21 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_00295 31369a7fa365195ef485d4f686ce1033 163 Gene3D G3DSA:3.40.50.300 5 157 1.9E-55 T 14-10-2018 PhaeoP54_00295 31369a7fa365195ef485d4f686ce1033 163 TIGRFAM TIGR00176 mobB: molybdopterin-guanine dinucleotide biosynthesis protein B 3 157 4.8E-47 T 14-10-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 PhaeoP54_00295 31369a7fa365195ef485d4f686ce1033 163 Pfam PF03205 Molybdopterin guanine dinucleotide synthesis protein B 5 135 5.9E-48 T 14-10-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 PhaeoP54_02211 243bac99c9cd15561d9fa8f38a3b618e 373 Pfam PF13704 Glycosyl transferase family 2 18 120 6.5E-20 T 14-10-2018 PhaeoP54_02211 243bac99c9cd15561d9fa8f38a3b618e 373 SUPERFAMILY SSF53448 13 156 4.87E-5 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PhaeoP54_01491 b8e5ae5e384e5a117a3116c515b93f61 304 Gene3D G3DSA:3.40.1790.10 2 304 1.3E-125 T 14-10-2018 IPR022830 Indigoidine synthase A-like GO:0016798 KEGG: 00240+4.2.1.70|MetaCyc: PWY-6019 PhaeoP54_01491 b8e5ae5e384e5a117a3116c515b93f61 304 Hamap MF_01876 Pseudouridine-5'-phosphate glycosidase [psuG]. 8 301 41.739 T 14-10-2018 IPR007342 Pseudouridine-5'-phosphate glycosidase GO:0016798 KEGG: 00240+4.2.1.70|MetaCyc: PWY-6019 PhaeoP54_01491 b8e5ae5e384e5a117a3116c515b93f61 304 Pfam PF04227 Indigoidine synthase A like protein 9 298 1.9E-122 T 14-10-2018 IPR007342 Pseudouridine-5'-phosphate glycosidase GO:0016798 KEGG: 00240+4.2.1.70|MetaCyc: PWY-6019 PhaeoP54_01491 b8e5ae5e384e5a117a3116c515b93f61 304 SUPERFAMILY SSF110581 4 299 3.01E-110 T 14-10-2018 IPR022830 Indigoidine synthase A-like GO:0016798 KEGG: 00240+4.2.1.70|MetaCyc: PWY-6019 PhaeoP54_00006 1a7a7e140aa6a3fd694153cea9eff64c 197 Gene3D G3DSA:3.40.50.360 1 196 1.9E-39 T 14-10-2018 IPR029039 Flavoprotein-like superfamily PhaeoP54_00006 1a7a7e140aa6a3fd694153cea9eff64c 197 Pfam PF02525 Flavodoxin-like fold 5 177 5.0E-32 T 14-10-2018 IPR003680 Flavodoxin-like fold PhaeoP54_00006 1a7a7e140aa6a3fd694153cea9eff64c 197 SUPERFAMILY SSF52218 5 196 2.26E-42 T 14-10-2018 IPR029039 Flavoprotein-like superfamily PhaeoP54_01347 ee539c2fe2102bc23a31475673e44d36 316 Gene3D G3DSA:3.40.50.1820 83 312 8.3E-31 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold PhaeoP54_01347 ee539c2fe2102bc23a31475673e44d36 316 SUPERFAMILY SSF53474 96 310 2.54E-37 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold PhaeoP54_01347 ee539c2fe2102bc23a31475673e44d36 316 Pfam PF12697 Alpha/beta hydrolase family 109 275 3.8E-12 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 PhaeoP54_02504 d092eac8d27683ae631306545ea0670f 252 SUPERFAMILY SSF53335 81 128 1.24E-5 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PhaeoP54_02504 d092eac8d27683ae631306545ea0670f 252 SUPERFAMILY SSF53335 23 220 4.87E-5 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PhaeoP54_02504 d092eac8d27683ae631306545ea0670f 252 Gene3D G3DSA:3.40.50.150 60 242 1.4E-5 T 14-10-2018 PhaeoP54_01701 bb37f5559cdbd2a114ec642e18140c21 201 Pfam PF00440 Bacterial regulatory proteins, tetR family 61 103 7.0E-15 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PhaeoP54_01701 bb37f5559cdbd2a114ec642e18140c21 201 Gene3D G3DSA:1.10.357.10 43 200 1.8E-22 T 14-10-2018 PhaeoP54_01701 bb37f5559cdbd2a114ec642e18140c21 201 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 57 70 1.0E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PhaeoP54_01701 bb37f5559cdbd2a114ec642e18140c21 201 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 78 101 1.0E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PhaeoP54_01701 bb37f5559cdbd2a114ec642e18140c21 201 SUPERFAMILY SSF46689 44 116 2.74E-16 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PhaeoP54_02951 956989e8c5e9ae0f4922d78b16337d99 230 Gene3D G3DSA:3.30.2010.10 135 219 1.7E-13 T 14-10-2018 PhaeoP54_02951 956989e8c5e9ae0f4922d78b16337d99 230 Pfam PF01863 Protein of unknown function DUF45 23 220 5.8E-50 T 14-10-2018 IPR002725 Protein of unknown function DUF45 PhaeoP54_03405 24da9747749d58778e38990ef8c6ef64 248 TIGRFAM TIGR01983 UbiG: 3-demethylubiquinone-9 3-O-methyltransferase 12 241 7.2E-84 T 14-10-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 PhaeoP54_03405 24da9747749d58778e38990ef8c6ef64 248 Gene3D G3DSA:3.40.50.150 12 246 1.0E-69 T 14-10-2018 PhaeoP54_03405 24da9747749d58778e38990ef8c6ef64 248 Pfam PF13489 Methyltransferase domain 61 215 7.8E-21 T 14-10-2018 PhaeoP54_03405 24da9747749d58778e38990ef8c6ef64 248 SUPERFAMILY SSF53335 18 233 2.11E-45 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PhaeoP54_03405 24da9747749d58778e38990ef8c6ef64 248 Hamap MF_00472 Ubiquinone biosynthesis O-methyltransferase [ubiG]. 12 247 37.618 T 14-10-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 PhaeoP54_02778 605210c5f649723215eacf5b92a00a6b 105 SMART SM00418 8 89 1.1E-8 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 PhaeoP54_02778 605210c5f649723215eacf5b92a00a6b 105 SUPERFAMILY SSF46785 2 93 6.59E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_02778 605210c5f649723215eacf5b92a00a6b 105 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 10 25 2.2E-8 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 PhaeoP54_02778 605210c5f649723215eacf5b92a00a6b 105 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 60 75 2.2E-8 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 PhaeoP54_02778 605210c5f649723215eacf5b92a00a6b 105 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 45 60 2.2E-8 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 PhaeoP54_02778 605210c5f649723215eacf5b92a00a6b 105 Pfam PF12840 Helix-turn-helix domain 10 69 9.2E-13 T 14-10-2018 PhaeoP54_02778 605210c5f649723215eacf5b92a00a6b 105 Gene3D G3DSA:1.10.10.10 1 99 6.5E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_01102 c4bc7eb52e491aa199eca26e593f00e4 68 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 55 3.1E-25 T 14-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PhaeoP54_01102 c4bc7eb52e491aa199eca26e593f00e4 68 Pfam PF01783 Ribosomal L32p protein family 2 55 2.8E-25 T 14-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PhaeoP54_01102 c4bc7eb52e491aa199eca26e593f00e4 68 SUPERFAMILY SSF57829 1 55 1.77E-21 T 14-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 PhaeoP54_01102 c4bc7eb52e491aa199eca26e593f00e4 68 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 55 19.676 T 14-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PhaeoP54_00575 9005c548e5c41108299e8f3ae413469f 811 PIRSF PIRSF037307 2 803 3.5E-169 T 14-10-2018 IPR017170 Lhr-like ATP-dependent RNA helicase, predicted GO:0005524|GO:0016818 PhaeoP54_00575 9005c548e5c41108299e8f3ae413469f 811 Pfam PF08494 DEAD/H associated 585 766 9.3E-41 T 14-10-2018 IPR013701 DEAD/H associated GO:0005524|GO:0016818 PhaeoP54_00575 9005c548e5c41108299e8f3ae413469f 811 SMART SM00487 15 219 8.8E-26 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain PhaeoP54_00575 9005c548e5c41108299e8f3ae413469f 811 SMART SM00490 260 345 1.2E-12 T 14-10-2018 IPR001650 Helicase, C-terminal PhaeoP54_00575 9005c548e5c41108299e8f3ae413469f 811 Pfam PF00271 Helicase conserved C-terminal domain 237 340 8.4E-15 T 14-10-2018 IPR001650 Helicase, C-terminal PhaeoP54_00575 9005c548e5c41108299e8f3ae413469f 811 Gene3D G3DSA:3.40.50.300 1 204 3.3E-44 T 14-10-2018 PhaeoP54_00575 9005c548e5c41108299e8f3ae413469f 811 TIGRFAM TIGR04121 DEXH_lig_assoc: DEXH box helicase, DNA ligase-associated 8 795 0.0 T 14-10-2018 IPR026362 DEXH box helicase, DNA ligase-associated PhaeoP54_00575 9005c548e5c41108299e8f3ae413469f 811 Pfam PF00270 DEAD/DEAH box helicase 22 187 1.1E-21 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 PhaeoP54_00575 9005c548e5c41108299e8f3ae413469f 811 Gene3D G3DSA:3.40.50.300 231 368 1.0E-23 T 14-10-2018 PhaeoP54_00575 9005c548e5c41108299e8f3ae413469f 811 SUPERFAMILY SSF52540 31 351 6.01E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_03260 2bbd311a82ea9e4cdfce7576ce13015c 311 SUPERFAMILY SSF48452 150 272 5.69E-8 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 PhaeoP54_03260 2bbd311a82ea9e4cdfce7576ce13015c 311 Pfam PF14561 Tetratricopeptide repeat 221 310 2.2E-29 T 14-10-2018 PhaeoP54_03260 2bbd311a82ea9e4cdfce7576ce13015c 311 Pfam PF14559 Tetratricopeptide repeat 150 216 5.5E-11 T 14-10-2018 PhaeoP54_03260 2bbd311a82ea9e4cdfce7576ce13015c 311 PRINTS PR00421 Thioredoxin family signature 47 56 1.6E-5 T 14-10-2018 PhaeoP54_03260 2bbd311a82ea9e4cdfce7576ce13015c 311 PRINTS PR00421 Thioredoxin family signature 39 47 1.6E-5 T 14-10-2018 PhaeoP54_03260 2bbd311a82ea9e4cdfce7576ce13015c 311 PRINTS PR00421 Thioredoxin family signature 92 103 1.6E-5 T 14-10-2018 PhaeoP54_03260 2bbd311a82ea9e4cdfce7576ce13015c 311 SUPERFAMILY SSF52833 16 129 4.59E-28 T 14-10-2018 IPR036249 Thioredoxin-like superfamily PhaeoP54_03260 2bbd311a82ea9e4cdfce7576ce13015c 311 Gene3D G3DSA:1.25.40.10 223 310 2.9E-25 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 PhaeoP54_03260 2bbd311a82ea9e4cdfce7576ce13015c 311 Gene3D G3DSA:3.40.30.10 15 129 6.2E-25 T 14-10-2018 PhaeoP54_03260 2bbd311a82ea9e4cdfce7576ce13015c 311 ProSitePatterns PS00194 Thioredoxin family active site. 40 58 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 PhaeoP54_03260 2bbd311a82ea9e4cdfce7576ce13015c 311 Pfam PF00085 Thioredoxin 18 126 2.1E-22 T 14-10-2018 IPR013766 Thioredoxin domain GO:0045454 PhaeoP54_03260 2bbd311a82ea9e4cdfce7576ce13015c 311 Gene3D G3DSA:1.25.40.10 140 222 1.5E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 PhaeoP54_02777 5cbfcd8af9f6c1802e145614908cb224 342 Pfam PF03773 Predicted permease 40 340 4.7E-38 T 14-10-2018 IPR005524 Predicted permease DUF318 PhaeoP54_03981 8e2df9317efb9d8092d061247dedfc27 961 Pfam PF12705 PD-(D/E)XK nuclease superfamily 710 950 1.3E-21 T 14-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type PhaeoP54_03981 8e2df9317efb9d8092d061247dedfc27 961 SUPERFAMILY SSF52980 707 891 8.04E-6 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 PhaeoP54_03981 8e2df9317efb9d8092d061247dedfc27 961 Pfam PF13361 UvrD-like helicase C-terminal domain 292 423 1.8E-7 T 14-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 PhaeoP54_03981 8e2df9317efb9d8092d061247dedfc27 961 Pfam PF00580 UvrD/REP helicase N-terminal domain 6 283 1.1E-69 T 14-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 PhaeoP54_03981 8e2df9317efb9d8092d061247dedfc27 961 Gene3D G3DSA:3.40.50.300 506 678 1.6E-15 T 14-10-2018 PhaeoP54_03981 8e2df9317efb9d8092d061247dedfc27 961 Gene3D G3DSA:1.10.10.160 111 201 5.5E-79 T 14-10-2018 IPR013986 DExx box DNA helicase domain superfamily PhaeoP54_03981 8e2df9317efb9d8092d061247dedfc27 961 Pfam PF13361 UvrD-like helicase C-terminal domain 546 658 6.2E-8 T 14-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 PhaeoP54_03981 8e2df9317efb9d8092d061247dedfc27 961 Gene3D G3DSA:3.40.50.300 295 420 1.1E-7 T 14-10-2018 PhaeoP54_03981 8e2df9317efb9d8092d061247dedfc27 961 Gene3D G3DSA:3.40.50.300 6 284 5.5E-79 T 14-10-2018 PhaeoP54_03981 8e2df9317efb9d8092d061247dedfc27 961 SUPERFAMILY SSF52540 4 680 1.8E-98 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_03981 8e2df9317efb9d8092d061247dedfc27 961 Gene3D G3DSA:3.90.320.10 699 956 1.1E-9 T 14-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal PhaeoP54_01684 4e8c0ef8404110ab4a0fb23ed5c3ba49 164 Pfam PF03918 Cytochrome C biogenesis protein 19 162 3.4E-45 T 14-10-2018 IPR005616 CcmH/CycL/Ccl2/NrfF family PhaeoP54_01684 4e8c0ef8404110ab4a0fb23ed5c3ba49 164 Gene3D G3DSA:1.10.8.640 25 107 1.5E-26 T 14-10-2018 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily PhaeoP54_02877 1a3c025fa784d6e4d2f6f6fd0070316c 367 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 4 363 49.568 T 14-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 PhaeoP54_02877 1a3c025fa784d6e4d2f6f6fd0070316c 367 SUPERFAMILY SSF53659 3 363 2.7E-118 T 14-10-2018 PhaeoP54_02877 1a3c025fa784d6e4d2f6f6fd0070316c 367 Gene3D G3DSA:3.40.718.10 3 367 7.6E-139 T 14-10-2018 PhaeoP54_02877 1a3c025fa784d6e4d2f6f6fd0070316c 367 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 6 359 9.0E-130 T 14-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 PhaeoP54_02877 1a3c025fa784d6e4d2f6f6fd0070316c 367 SMART SM01329 5 359 4.3E-192 T 14-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 PhaeoP54_02877 1a3c025fa784d6e4d2f6f6fd0070316c 367 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 244 263 - T 14-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 PhaeoP54_02877 1a3c025fa784d6e4d2f6f6fd0070316c 367 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 6 358 1.6E-146 T 14-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 PhaeoP54_00861 9ee6c619be175278daec6f15fb02e684 197 SUPERFAMILY SSF63380 1 93 1.36E-21 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel PhaeoP54_00861 9ee6c619be175278daec6f15fb02e684 197 Pfam PF00677 Lumazine binding domain 100 184 5.8E-23 T 14-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 PhaeoP54_00861 9ee6c619be175278daec6f15fb02e684 197 Pfam PF00677 Lumazine binding domain 3 87 2.1E-19 T 14-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 PhaeoP54_00861 9ee6c619be175278daec6f15fb02e684 197 SUPERFAMILY SSF63380 93 193 3.4E-31 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel PhaeoP54_00861 9ee6c619be175278daec6f15fb02e684 197 Gene3D G3DSA:2.40.30.20 1 89 6.9E-23 T 14-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 PhaeoP54_00861 9ee6c619be175278daec6f15fb02e684 197 Gene3D G3DSA:2.40.30.20 102 196 6.5E-34 T 14-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 PhaeoP54_00861 9ee6c619be175278daec6f15fb02e684 197 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 192 7.3E-54 T 14-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 PhaeoP54_00861 9ee6c619be175278daec6f15fb02e684 197 PIRSF PIRSF000498 1 196 1.2E-69 T 14-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 PhaeoP54_01954 a3a9f0defbe5f496ebb32a9cb04305a5 189 Gene3D G3DSA:3.40.50.1240 4 187 4.7E-40 T 14-10-2018 IPR029033 Histidine phosphatase superfamily PhaeoP54_01954 a3a9f0defbe5f496ebb32a9cb04305a5 189 SUPERFAMILY SSF53254 1 181 2.14E-42 T 14-10-2018 IPR029033 Histidine phosphatase superfamily PhaeoP54_01954 a3a9f0defbe5f496ebb32a9cb04305a5 189 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 6 180 8.4E-35 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 PhaeoP54_01954 a3a9f0defbe5f496ebb32a9cb04305a5 189 SMART SM00855 5 155 4.5E-19 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 PhaeoP54_01954 a3a9f0defbe5f496ebb32a9cb04305a5 189 PIRSF PIRSF000709 2 186 2.8E-15 T 14-10-2018 PhaeoP54_01954 a3a9f0defbe5f496ebb32a9cb04305a5 189 PRINTS PR00991 6-phosphofructo-2-kinase family signature 6 28 2.5E-5 T 14-10-2018 IPR003094 Fructose-2,6-bisphosphatase GO:0003824|GO:0005524|GO:0006003 KEGG: 00051+2.7.1.105+3.1.3.46|Reactome: R-HSA-70171 PhaeoP54_01954 a3a9f0defbe5f496ebb32a9cb04305a5 189 PRINTS PR00991 6-phosphofructo-2-kinase family signature 87 103 2.5E-5 T 14-10-2018 IPR003094 Fructose-2,6-bisphosphatase GO:0003824|GO:0005524|GO:0006003 KEGG: 00051+2.7.1.105+3.1.3.46|Reactome: R-HSA-70171 PhaeoP54_02466 13235bf604ecc768db4133cd9b95edf4 288 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 23 286 1.9E-32 T 14-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 PhaeoP54_02466 13235bf604ecc768db4133cd9b95edf4 288 SUPERFAMILY SSF56529 17 287 1.44E-34 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 PhaeoP54_02466 13235bf604ecc768db4133cd9b95edf4 288 Gene3D G3DSA:3.90.850.10 13 278 1.6E-42 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 PhaeoP54_01572 112dd4e04299167042c838238e76a7dc 456 Pfam PF01474 Class-II DAHP synthetase family 4 440 1.8E-201 T 14-10-2018 IPR002480 DAHP synthetase, class II GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 PhaeoP54_01572 112dd4e04299167042c838238e76a7dc 456 TIGRFAM TIGR01358 DAHP_synth_II: 3-deoxy-7-phosphoheptulonate synthase 4 445 1.9E-208 T 14-10-2018 IPR002480 DAHP synthetase, class II GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 PhaeoP54_01572 112dd4e04299167042c838238e76a7dc 456 SUPERFAMILY SSF51569 2 443 4.83E-195 T 14-10-2018 PhaeoP54_01766 9a7db8c0b5961ca1d8f329eb80388af9 156 Gene3D G3DSA:3.90.1720.10 6 148 5.3E-20 T 14-10-2018 PhaeoP54_01766 9a7db8c0b5961ca1d8f329eb80388af9 156 TIGRFAM TIGR02219 phage_NlpC_fam: putative phage cell wall peptidase, NlpC/P60 family 13 148 1.2E-52 T 14-10-2018 IPR011929 NlpC/P60 family, putative phage cell wall peptidase PhaeoP54_01766 9a7db8c0b5961ca1d8f329eb80388af9 156 SUPERFAMILY SSF54001 7 142 9.81E-16 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily PhaeoP54_01766 9a7db8c0b5961ca1d8f329eb80388af9 156 Pfam PF00877 NlpC/P60 family 21 142 1.0E-6 T 14-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain PhaeoP54_02481 e59411d123e80954babff79ba3a64650 407 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 88 181 9.8E-11 T 14-10-2018 PhaeoP54_02481 e59411d123e80954babff79ba3a64650 407 Gene3D G3DSA:2.70.160.11 208 367 6.0E-17 T 14-10-2018 PhaeoP54_02481 e59411d123e80954babff79ba3a64650 407 Gene3D G3DSA:3.40.50.150 62 205 1.1E-46 T 14-10-2018 PhaeoP54_02481 e59411d123e80954babff79ba3a64650 407 SUPERFAMILY SSF53335 71 348 1.49E-44 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PhaeoP54_02478 6bf4a49153878aaba31c1a6f38bb0416 325 SUPERFAMILY SSF53850 116 323 1.05E-28 T 14-10-2018 PhaeoP54_02478 6bf4a49153878aaba31c1a6f38bb0416 325 Gene3D G3DSA:3.40.190.290 118 324 2.4E-32 T 14-10-2018 PhaeoP54_02478 6bf4a49153878aaba31c1a6f38bb0416 325 Gene3D G3DSA:1.10.10.10 23 113 5.5E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_02478 6bf4a49153878aaba31c1a6f38bb0416 325 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 31 89 2.6E-17 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PhaeoP54_02478 6bf4a49153878aaba31c1a6f38bb0416 325 SUPERFAMILY SSF46785 18 132 6.81E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_02478 6bf4a49153878aaba31c1a6f38bb0416 325 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 57 67 5.4E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PhaeoP54_02478 6bf4a49153878aaba31c1a6f38bb0416 325 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 46 57 5.4E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PhaeoP54_02478 6bf4a49153878aaba31c1a6f38bb0416 325 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 67 78 5.4E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PhaeoP54_02478 6bf4a49153878aaba31c1a6f38bb0416 325 Pfam PF03466 LysR substrate binding domain 115 320 1.3E-29 T 14-10-2018 IPR005119 LysR, substrate-binding PhaeoP54_02569 39f1f59010f10720821c53e7f51e1d3d 500 Gene3D G3DSA:3.40.50.300 189 500 7.5E-58 T 14-10-2018 PhaeoP54_02569 39f1f59010f10720821c53e7f51e1d3d 500 Gene3D G3DSA:3.30.230.10 30 167 2.3E-6 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PhaeoP54_02569 39f1f59010f10720821c53e7f51e1d3d 500 Pfam PF13541 Subunit ChlI of Mg-chelatase 20 139 1.7E-40 T 14-10-2018 PhaeoP54_02569 39f1f59010f10720821c53e7f51e1d3d 500 SMART SM00382 208 390 4.5E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_02569 39f1f59010f10720821c53e7f51e1d3d 500 SUPERFAMILY SSF54211 7 168 1.56E-32 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold PhaeoP54_02569 39f1f59010f10720821c53e7f51e1d3d 500 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 6 497 3.7E-159 T 14-10-2018 IPR004482 Mg chelatase-related protein PhaeoP54_02569 39f1f59010f10720821c53e7f51e1d3d 500 Pfam PF01078 Magnesium chelatase, subunit ChlI 188 391 6.7E-93 T 14-10-2018 IPR000523 Magnesium chelatase ChlI domain PhaeoP54_02569 39f1f59010f10720821c53e7f51e1d3d 500 SUPERFAMILY SSF52540 187 497 2.42E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_02569 39f1f59010f10720821c53e7f51e1d3d 500 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 401 497 1.3E-29 T 14-10-2018 IPR025158 Mg chelatase-related protein, C-terminal domain PhaeoP54_00229 7b8c8cec16f71d6016b6560c0da75745 291 Pfam PF02653 Branched-chain amino acid transport system / permease component 7 275 5.4E-37 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 PhaeoP54_03183 61ba5ac623cd034ad9729f98ec256f3e 243 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 18 237 1.3E-37 T 14-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 PhaeoP54_03183 61ba5ac623cd034ad9729f98ec256f3e 243 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 19 237 1.4E-44 T 14-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 PhaeoP54_03183 61ba5ac623cd034ad9729f98ec256f3e 243 Gene3D G3DSA:3.20.20.70 14 242 9.5E-67 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PhaeoP54_03183 61ba5ac623cd034ad9729f98ec256f3e 243 SMART SM00934 18 237 1.7E-69 T 14-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 PhaeoP54_03183 61ba5ac623cd034ad9729f98ec256f3e 243 SUPERFAMILY SSF51366 17 239 3.46E-56 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 PhaeoP54_02412 23dbc847f6bce543bf4ceaed176412bf 206 SMART SM00363 94 158 3.9E-20 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PhaeoP54_02412 23dbc847f6bce543bf4ceaed176412bf 206 Gene3D G3DSA:1.10.1050.10 6 205 3.5E-70 T 14-10-2018 PhaeoP54_02412 23dbc847f6bce543bf4ceaed176412bf 206 SMART SM01390 3 93 1.1E-40 T 14-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 PhaeoP54_02412 23dbc847f6bce543bf4ceaed176412bf 206 SUPERFAMILY SSF55174 4 204 5.63E-63 T 14-10-2018 PhaeoP54_02412 23dbc847f6bce543bf4ceaed176412bf 206 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 5 93 9.2E-26 T 14-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 PhaeoP54_02412 23dbc847f6bce543bf4ceaed176412bf 206 Pfam PF01479 S4 domain 94 141 3.3E-20 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PhaeoP54_02412 23dbc847f6bce543bf4ceaed176412bf 206 Gene3D G3DSA:3.10.290.10 93 188 3.5E-70 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 PhaeoP54_02412 23dbc847f6bce543bf4ceaed176412bf 206 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 5 205 6.1E-72 T 14-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 PhaeoP54_02412 23dbc847f6bce543bf4ceaed176412bf 206 ProSitePatterns PS00632 Ribosomal protein S4 signature. 92 116 - T 14-10-2018 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6790901|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PhaeoP54_02412 23dbc847f6bce543bf4ceaed176412bf 206 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 205 32.722 T 14-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 PhaeoP54_01322 ab8ffbeca7796bf7a7a8d67ebb6853d2 222 Gene3D G3DSA:3.40.50.880 1 219 7.4E-70 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like PhaeoP54_01322 ab8ffbeca7796bf7a7a8d67ebb6853d2 222 TIGRFAM TIGR01737 FGAM_synth_I: phosphoribosylformylglycinamidine synthase I 1 216 2.5E-87 T 14-10-2018 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 PhaeoP54_01322 ab8ffbeca7796bf7a7a8d67ebb6853d2 222 SUPERFAMILY SSF52317 1 215 5.35E-75 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like PhaeoP54_01322 ab8ffbeca7796bf7a7a8d67ebb6853d2 222 SMART SM01211 1 219 9.1E-125 T 14-10-2018 PhaeoP54_01322 ab8ffbeca7796bf7a7a8d67ebb6853d2 222 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 2 200 1.1E-42 T 14-10-2018 PhaeoP54_01322 ab8ffbeca7796bf7a7a8d67ebb6853d2 222 PIRSF PIRSF001586 1 222 4.6E-82 T 14-10-2018 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 PhaeoP54_01322 ab8ffbeca7796bf7a7a8d67ebb6853d2 222 Hamap MF_00421 Phosphoribosylformylglycinamidine synthase subunit PurQ [purQ]. 1 217 41.341 T 14-10-2018 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 PhaeoP54_01960 dddb9d3830c1a208269b0cc5f185e371 140 Gene3D G3DSA:1.10.10.10 5 139 3.5E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_01960 dddb9d3830c1a208269b0cc5f185e371 140 SMART SM00347 25 129 1.5E-4 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PhaeoP54_01960 dddb9d3830c1a208269b0cc5f185e371 140 Pfam PF13463 Winged helix DNA-binding domain 33 107 1.0E-6 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PhaeoP54_01960 dddb9d3830c1a208269b0cc5f185e371 140 SUPERFAMILY SSF46785 8 130 4.07E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_00564 03e98c59a38346eca38a0eecdc1395c8 446 SUPERFAMILY SSF69304 167 443 2.22E-56 T 14-10-2018 PhaeoP54_00564 03e98c59a38346eca38a0eecdc1395c8 446 Pfam PF07676 WD40-like Beta Propeller Repeat 207 240 3.8E-4 T 14-10-2018 IPR011659 WD40-like Beta Propeller PhaeoP54_00564 03e98c59a38346eca38a0eecdc1395c8 446 Pfam PF07676 WD40-like Beta Propeller Repeat 294 329 4.4E-13 T 14-10-2018 IPR011659 WD40-like Beta Propeller PhaeoP54_00564 03e98c59a38346eca38a0eecdc1395c8 446 Pfam PF07676 WD40-like Beta Propeller Repeat 381 418 1.7E-6 T 14-10-2018 IPR011659 WD40-like Beta Propeller PhaeoP54_00564 03e98c59a38346eca38a0eecdc1395c8 446 Pfam PF07676 WD40-like Beta Propeller Repeat 258 285 3.5E-5 T 14-10-2018 IPR011659 WD40-like Beta Propeller PhaeoP54_00564 03e98c59a38346eca38a0eecdc1395c8 446 Pfam PF07676 WD40-like Beta Propeller Repeat 338 371 1.4E-4 T 14-10-2018 IPR011659 WD40-like Beta Propeller PhaeoP54_00564 03e98c59a38346eca38a0eecdc1395c8 446 Gene3D G3DSA:2.120.10.30 176 446 8.7E-78 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like PhaeoP54_00564 03e98c59a38346eca38a0eecdc1395c8 446 SUPERFAMILY SSF52964 38 172 1.15E-35 T 14-10-2018 PhaeoP54_00564 03e98c59a38346eca38a0eecdc1395c8 446 TIGRFAM TIGR02800 propeller_TolB: Tol-Pal system beta propeller repeat protein TolB 27 442 3.7E-130 T 14-10-2018 IPR014167 Tol-Pal system protein TolB GO:0017038|GO:0042597 PhaeoP54_00564 03e98c59a38346eca38a0eecdc1395c8 446 Gene3D G3DSA:3.40.50.10070 30 175 3.1E-31 T 14-10-2018 IPR036752 TolB, N-terminal domain superfamily GO:0015031|GO:0042597 PhaeoP54_00564 03e98c59a38346eca38a0eecdc1395c8 446 Hamap MF_00671 Tol-Pal system protein TolB [tolB]. 14 441 47.77 T 14-10-2018 IPR014167 Tol-Pal system protein TolB GO:0017038|GO:0042597 PhaeoP54_00564 03e98c59a38346eca38a0eecdc1395c8 446 Pfam PF04052 TolB amino-terminal domain 33 139 1.0E-26 T 14-10-2018 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 PhaeoP54_01105 f5b173811042ef3a5d4564df3f81952e 274 Gene3D G3DSA:3.40.630.30 50 163 2.6E-9 T 14-10-2018 PhaeoP54_01105 f5b173811042ef3a5d4564df3f81952e 274 Pfam PF13444 Acetyltransferase (GNAT) domain 61 141 2.8E-15 T 14-10-2018 PhaeoP54_01105 f5b173811042ef3a5d4564df3f81952e 274 SUPERFAMILY SSF55729 40 238 1.49E-27 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase PhaeoP54_03396 45c049de812c92c1c806a580dc81c1b8 409 Hamap MF_01106 Arginine biosynthesis bifunctional protein ArgJ [argJ]. 1 409 139.551 T 14-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 PhaeoP54_03396 45c049de812c92c1c806a580dc81c1b8 409 Gene3D G3DSA:3.10.20.340 281 409 1.9E-43 T 14-10-2018 PhaeoP54_03396 45c049de812c92c1c806a580dc81c1b8 409 Gene3D G3DSA:3.60.70.12 13 280 3.1E-83 T 14-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 PhaeoP54_03396 45c049de812c92c1c806a580dc81c1b8 409 SUPERFAMILY SSF56266 19 406 4.84E-130 T 14-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 PhaeoP54_03396 45c049de812c92c1c806a580dc81c1b8 409 Pfam PF01960 ArgJ family 24 409 4.8E-133 T 14-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 PhaeoP54_03396 45c049de812c92c1c806a580dc81c1b8 409 TIGRFAM TIGR00120 ArgJ: glutamate N-acetyltransferase/amino-acid acetyltransferase 18 409 4.3E-111 T 14-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 PhaeoP54_03396 45c049de812c92c1c806a580dc81c1b8 409 ProDom PD004193 ACETYLTRANSFERASE ORNITHINE ARGININE BIOSYNTHESIS ARGJ GLUTAMATE N-ACETYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIFUNCTIONAL 30 407 3.0E-161 T 14-10-2018 PhaeoP54_03149 42849e98bcd54352417df94a4b73c1f8 103 TIGRFAM TIGR04161 VPEID-CTERM: VPEID-CTERM protein sorting domain 70 100 2.4E-16 T 14-10-2018 IPR026422 VPEID-CTERM protein sorting domain PhaeoP54_00391 1dd35212cf24f12037d4c73f5c826de1 289 SUPERFAMILY SSF161098 87 273 4.58E-30 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_00391 1dd35212cf24f12037d4c73f5c826de1 289 Gene3D G3DSA:1.10.3720.10 82 285 9.0E-28 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_00391 1dd35212cf24f12037d4c73f5c826de1 289 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 126 277 2.7E-11 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PhaeoP54_00391 1dd35212cf24f12037d4c73f5c826de1 289 TIGRFAM TIGR01097 PhnE: phosphonate ABC transporter, permease protein PhnE 24 283 4.5E-73 T 14-10-2018 IPR005769 ABC transporter, permease PhnE/PtxC GO:0005887|GO:0015604|GO:0015716 PhaeoP54_03729 4ff0d211da7bb089aafd7fcfb6bc6d92 1725 Gene3D G3DSA:2.150.10.10 1401 1534 3.0E-11 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal PhaeoP54_03729 4ff0d211da7bb089aafd7fcfb6bc6d92 1725 SUPERFAMILY SSF51120 1538 1719 2.32E-33 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal PhaeoP54_03729 4ff0d211da7bb089aafd7fcfb6bc6d92 1725 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1618 1635 0.42 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_03729 4ff0d211da7bb089aafd7fcfb6bc6d92 1725 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1538 1554 0.052 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_03729 4ff0d211da7bb089aafd7fcfb6bc6d92 1725 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1510 1527 0.067 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_03729 4ff0d211da7bb089aafd7fcfb6bc6d92 1725 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1484 1500 0.16 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_03729 4ff0d211da7bb089aafd7fcfb6bc6d92 1725 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1636 1653 0.17 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_03729 4ff0d211da7bb089aafd7fcfb6bc6d92 1725 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1591 1608 0.11 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_03729 4ff0d211da7bb089aafd7fcfb6bc6d92 1725 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1555 1571 0.0035 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_03729 4ff0d211da7bb089aafd7fcfb6bc6d92 1725 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1573 1590 0.034 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 PhaeoP54_03729 4ff0d211da7bb089aafd7fcfb6bc6d92 1725 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1633 1651 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site PhaeoP54_03729 4ff0d211da7bb089aafd7fcfb6bc6d92 1725 PRINTS PR00313 NodO calcium binding signature 1490 1501 2.5E-11 T 14-10-2018 PhaeoP54_03729 4ff0d211da7bb089aafd7fcfb6bc6d92 1725 PRINTS PR00313 NodO calcium binding signature 1547 1555 2.5E-11 T 14-10-2018 PhaeoP54_03729 4ff0d211da7bb089aafd7fcfb6bc6d92 1725 PRINTS PR00313 NodO calcium binding signature 1646 1655 2.5E-11 T 14-10-2018 PhaeoP54_03729 4ff0d211da7bb089aafd7fcfb6bc6d92 1725 PRINTS PR00313 NodO calcium binding signature 1520 1528 2.5E-11 T 14-10-2018 PhaeoP54_03729 4ff0d211da7bb089aafd7fcfb6bc6d92 1725 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1624 1642 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site PhaeoP54_03729 4ff0d211da7bb089aafd7fcfb6bc6d92 1725 Pfam PF14252 Domain of unknown function (DUF4347) 6 169 1.9E-49 T 14-10-2018 IPR025592 Domain of unknown function DUF4347 PhaeoP54_03729 4ff0d211da7bb089aafd7fcfb6bc6d92 1725 Gene3D G3DSA:2.150.10.10 1598 1725 1.8E-25 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal PhaeoP54_03729 4ff0d211da7bb089aafd7fcfb6bc6d92 1725 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1552 1570 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site PhaeoP54_03729 4ff0d211da7bb089aafd7fcfb6bc6d92 1725 Gene3D G3DSA:2.150.10.10 1535 1585 1.5E-11 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal PhaeoP54_00193 9c7a026d5d35d3b84af125aa245440df 211 Pfam PF01161 Phosphatidylethanolamine-binding protein 27 200 4.3E-41 T 14-10-2018 IPR008914 Phosphatidylethanolamine-binding protein PhaeoP54_00193 9c7a026d5d35d3b84af125aa245440df 211 TIGRFAM TIGR00481 TIGR00481: Raf kinase inhibitor-like protein, YbhB/YbcL family 30 198 1.6E-28 T 14-10-2018 IPR005247 YbhB/YbcL PhaeoP54_00193 9c7a026d5d35d3b84af125aa245440df 211 SUPERFAMILY SSF49777 1 200 4.71E-43 T 14-10-2018 IPR036610 PEBP-like superfamily PhaeoP54_00193 9c7a026d5d35d3b84af125aa245440df 211 Gene3D G3DSA:3.90.280.10 1 202 1.0E-50 T 14-10-2018 IPR036610 PEBP-like superfamily PhaeoP54_00539 c6a9ebcc7a8bd3790c1022c44bbba574 351 TIGRFAM TIGR01620 hyp_HI0043: TIGR01620 family protein 56 340 1.8E-50 T 14-10-2018 IPR006507 Uncharacterised protein family UPF0283 PhaeoP54_00539 c6a9ebcc7a8bd3790c1022c44bbba574 351 Pfam PF05128 Domain of unknown function (DUF697) 189 346 2.5E-47 T 14-10-2018 IPR021147 Protein of unknown function DUF697 PhaeoP54_01935 ea5a0017a5855cc40035a5dcdb962ce7 268 SUPERFAMILY SSF47413 12 78 2.08E-8 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 PhaeoP54_01935 ea5a0017a5855cc40035a5dcdb962ce7 268 SMART SM00530 21 75 1.4E-4 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PhaeoP54_01935 ea5a0017a5855cc40035a5dcdb962ce7 268 Gene3D G3DSA:1.10.260.40 11 77 2.2E-8 T 14-10-2018 PhaeoP54_01935 ea5a0017a5855cc40035a5dcdb962ce7 268 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 26 79 1.5E-7 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PhaeoP54_00191 1e9db5ee82ae45b6cafc7d0537924852 260 Pfam PF12833 Helix-turn-helix domain 181 256 1.5E-18 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PhaeoP54_00191 1e9db5ee82ae45b6cafc7d0537924852 260 SUPERFAMILY SSF46689 210 256 1.25E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PhaeoP54_00191 1e9db5ee82ae45b6cafc7d0537924852 260 SMART SM00342 174 256 5.2E-24 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PhaeoP54_00191 1e9db5ee82ae45b6cafc7d0537924852 260 Gene3D G3DSA:1.10.10.60 154 260 9.1E-26 T 14-10-2018 PhaeoP54_00191 1e9db5ee82ae45b6cafc7d0537924852 260 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 210 252 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 PhaeoP54_00191 1e9db5ee82ae45b6cafc7d0537924852 260 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 225 240 8.3E-7 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PhaeoP54_00191 1e9db5ee82ae45b6cafc7d0537924852 260 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 240 256 8.3E-7 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PhaeoP54_03189 8ea03fab99137c71490ac09688deae2d 338 Gene3D G3DSA:3.40.190.10 125 336 5.7E-113 T 14-10-2018 PhaeoP54_03189 8ea03fab99137c71490ac09688deae2d 338 Pfam PF13343 Bacterial extracellular solute-binding protein 72 302 2.1E-26 T 14-10-2018 PhaeoP54_03189 8ea03fab99137c71490ac09688deae2d 338 Gene3D G3DSA:3.40.190.10 27 301 5.7E-113 T 14-10-2018 PhaeoP54_03189 8ea03fab99137c71490ac09688deae2d 338 PIRSF PIRSF002825 1 338 1.5E-83 T 14-10-2018 IPR026045 Ferric binding protein PhaeoP54_03189 8ea03fab99137c71490ac09688deae2d 338 SUPERFAMILY SSF53850 21 334 3.71E-77 T 14-10-2018 PhaeoP54_02794 d916de3d1d118d3d445316874f50af6e 354 Pfam PF01266 FAD dependent oxidoreductase 5 336 9.2E-29 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 PhaeoP54_02794 d916de3d1d118d3d445316874f50af6e 354 SUPERFAMILY SSF51971 2 343 3.18E-19 T 14-10-2018 PhaeoP54_02794 d916de3d1d118d3d445316874f50af6e 354 Gene3D G3DSA:3.30.9.10 90 296 8.0E-41 T 14-10-2018 PhaeoP54_02794 d916de3d1d118d3d445316874f50af6e 354 Gene3D G3DSA:3.50.50.60 5 337 8.0E-41 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PhaeoP54_01575 dc2bd088704987394c623e87f4274aeb 397 Pfam PF13458 Periplasmic binding protein 26 327 1.8E-33 T 14-10-2018 IPR028081 Leucine-binding protein domain PhaeoP54_01575 dc2bd088704987394c623e87f4274aeb 397 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 49 65 1.7E-5 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 PhaeoP54_01575 dc2bd088704987394c623e87f4274aeb 397 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 27 43 1.7E-5 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 PhaeoP54_01575 dc2bd088704987394c623e87f4274aeb 397 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 271 289 1.7E-5 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 PhaeoP54_01575 dc2bd088704987394c623e87f4274aeb 397 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 91 101 1.7E-5 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 PhaeoP54_01575 dc2bd088704987394c623e87f4274aeb 397 SUPERFAMILY SSF53822 20 393 8.05E-60 T 14-10-2018 IPR028082 Periplasmic binding protein-like I PhaeoP54_01575 dc2bd088704987394c623e87f4274aeb 397 Gene3D G3DSA:3.40.50.2300 149 277 1.7E-55 T 14-10-2018 PhaeoP54_01575 dc2bd088704987394c623e87f4274aeb 397 Gene3D G3DSA:3.40.50.2300 28 328 1.7E-55 T 14-10-2018 PhaeoP54_01868 03b9db1dd01301140c7512549c608a94 222 SUPERFAMILY SSF46785 152 221 4.74E-14 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_01868 03b9db1dd01301140c7512549c608a94 222 SMART SM00100 14 137 1.8E-5 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain PhaeoP54_01868 03b9db1dd01301140c7512549c608a94 222 Pfam PF00027 Cyclic nucleotide-binding domain 33 120 1.7E-11 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain PhaeoP54_01868 03b9db1dd01301140c7512549c608a94 222 Pfam PF13545 Crp-like helix-turn-helix domain 155 219 1.3E-14 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 PhaeoP54_01868 03b9db1dd01301140c7512549c608a94 222 Gene3D G3DSA:1.10.10.10 148 220 1.3E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_01868 03b9db1dd01301140c7512549c608a94 222 SUPERFAMILY SSF51206 10 149 7.86E-28 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like PhaeoP54_01868 03b9db1dd01301140c7512549c608a94 222 SMART SM00419 166 212 0.0011 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 PhaeoP54_01868 03b9db1dd01301140c7512549c608a94 222 Gene3D G3DSA:2.60.120.10 8 147 8.5E-40 T 14-10-2018 IPR014710 RmlC-like jelly roll fold PhaeoP54_00771 b4b9524d1ea80b7e8e250f54bd54b583 225 Gene3D G3DSA:1.10.1760.20 1 208 2.3E-7 T 14-10-2018 PhaeoP54_00771 b4b9524d1ea80b7e8e250f54bd54b583 225 Pfam PF01891 Cobalt uptake substrate-specific transmembrane region 2 208 3.3E-13 T 14-10-2018 IPR002751 Metal transport protein CbiM/NikMN GO:0000041|GO:0016021 PhaeoP54_01421 2ded81624ff29b0fc8fcc5c5136dc1ac 125 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 59 112 2.0E-14 T 14-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 PhaeoP54_01421 2ded81624ff29b0fc8fcc5c5136dc1ac 125 Hamap MF_01021 Phosphoribosyl-AMP cyclohydrolase [hisI]. 10 113 29.961 T 14-10-2018 IPR026660 Phosphoribosyl-AMP cyclohydrolase GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 PhaeoP54_01421 2ded81624ff29b0fc8fcc5c5136dc1ac 125 Gene3D G3DSA:3.10.20.400 3 100 2.0E-39 T 14-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 PhaeoP54_01421 2ded81624ff29b0fc8fcc5c5136dc1ac 125 SUPERFAMILY SSF141734 14 118 1.7E-47 T 14-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 PhaeoP54_01421 2ded81624ff29b0fc8fcc5c5136dc1ac 125 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 36 109 1.6E-34 T 14-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 PhaeoP54_03482 1bb4de3aeb8e6315fb1cae4cf095bca4 113 Gene3D G3DSA:1.10.238.120 1 113 4.0E-45 T 14-10-2018 IPR023154 Jann4075-like superfamily PhaeoP54_03482 1bb4de3aeb8e6315fb1cae4cf095bca4 113 SUPERFAMILY SSF158587 2 112 1.28E-48 T 14-10-2018 IPR023154 Jann4075-like superfamily PhaeoP54_03482 1bb4de3aeb8e6315fb1cae4cf095bca4 113 Pfam PF11015 Protein of unknown function (DUF2853) 10 109 4.2E-45 T 14-10-2018 IPR021274 Protein of unknown function DUF2853 PhaeoP54_03424 e375de64b00d77ba7817f40e42ca14c3 150 ProSitePatterns PS00893 Nudix box signature. 48 69 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 PhaeoP54_03424 e375de64b00d77ba7817f40e42ca14c3 150 SUPERFAMILY SSF55811 7 139 4.2E-26 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 PhaeoP54_03424 e375de64b00d77ba7817f40e42ca14c3 150 Gene3D G3DSA:3.90.79.10 3 143 9.1E-27 T 14-10-2018 PhaeoP54_03424 e375de64b00d77ba7817f40e42ca14c3 150 Pfam PF00293 NUDIX domain 16 137 1.9E-15 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 PhaeoP54_03673 4570525210956550c8ea8c078d66d80e 441 SUPERFAMILY SSF48317 25 409 2.78E-51 T 14-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily PhaeoP54_03673 4570525210956550c8ea8c078d66d80e 441 Gene3D G3DSA:1.10.606.20 31 417 3.2E-79 T 14-10-2018 PhaeoP54_02267 6b33aae1c3f17fbee3ac4d69aa7befd3 106 Pfam PF08803 Putative mono-oxygenase ydhR 6 101 8.0E-30 T 14-10-2018 IPR014910 Putative monooxygenase YdhR PhaeoP54_02267 6b33aae1c3f17fbee3ac4d69aa7befd3 106 Gene3D G3DSA:3.30.70.100 1 106 3.6E-31 T 14-10-2018 PhaeoP54_02267 6b33aae1c3f17fbee3ac4d69aa7befd3 106 SUPERFAMILY SSF54909 4 99 6.43E-25 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel PhaeoP54_03602 a3935817c64ac9fdb3dc8a95b6db61c5 393 Gene3D G3DSA:3.40.50.2000 189 356 6.0E-7 T 14-10-2018 PhaeoP54_03602 a3935817c64ac9fdb3dc8a95b6db61c5 393 SUPERFAMILY SSF53756 20 354 2.32E-13 T 14-10-2018 PhaeoP54_03706 f46ca986a76614d66728799b9f1380f5 320 SUPERFAMILY SSF161098 3 320 8.5E-61 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_03706 f46ca986a76614d66728799b9f1380f5 320 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 134 310 1.3E-22 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PhaeoP54_03727 05ca4ce3aaca3ec720520a99240e3af8 321 PIRSF PIRSF015753 9 315 3.9E-112 T 14-10-2018 IPR016639 Glutathione S-transferase Omega/GSH GO:0004364 PhaeoP54_03727 05ca4ce3aaca3ec720520a99240e3af8 321 SUPERFAMILY SSF47616 176 315 1.53E-27 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily PhaeoP54_03727 05ca4ce3aaca3ec720520a99240e3af8 321 Gene3D G3DSA:3.40.30.130 19 308 5.9E-116 T 14-10-2018 PhaeoP54_03727 05ca4ce3aaca3ec720520a99240e3af8 321 SUPERFAMILY SSF52833 29 153 4.6E-12 T 14-10-2018 IPR036249 Thioredoxin-like superfamily PhaeoP54_03727 05ca4ce3aaca3ec720520a99240e3af8 321 Gene3D G3DSA:1.20.1050.10 165 275 5.9E-116 T 14-10-2018 PhaeoP54_03727 05ca4ce3aaca3ec720520a99240e3af8 321 Pfam PF13410 Glutathione S-transferase, C-terminal domain 195 258 5.3E-9 T 14-10-2018 PhaeoP54_03727 05ca4ce3aaca3ec720520a99240e3af8 321 Pfam PF13409 Glutathione S-transferase, N-terminal domain 54 149 1.2E-17 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 PhaeoP54_03458 7146c4ef08bb03a69f822320c48a64ec 350 Gene3D G3DSA:2.40.40.10 25 112 5.5E-21 T 14-10-2018 IPR036908 RlpA-like domain superfamily PhaeoP54_03458 7146c4ef08bb03a69f822320c48a64ec 350 SUPERFAMILY SSF50685 22 344 9.42E-120 T 14-10-2018 IPR036908 RlpA-like domain superfamily PhaeoP54_03458 7146c4ef08bb03a69f822320c48a64ec 350 Gene3D G3DSA:2.40.40.10 250 345 1.2E-32 T 14-10-2018 IPR036908 RlpA-like domain superfamily PhaeoP54_03458 7146c4ef08bb03a69f822320c48a64ec 350 Pfam PF06725 3D domain 266 336 3.2E-24 T 14-10-2018 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 PhaeoP54_03458 7146c4ef08bb03a69f822320c48a64ec 350 SMART SM00925 108 243 1.9E-67 T 14-10-2018 IPR005300 Lytic transglycosylase MltA, domain B GO:0004553 PhaeoP54_03458 7146c4ef08bb03a69f822320c48a64ec 350 PIRSF PIRSF019422 7 348 1.1E-97 T 14-10-2018 IPR026044 Membrane-bound lytic murein transglycosylase A PhaeoP54_03458 7146c4ef08bb03a69f822320c48a64ec 350 Gene3D G3DSA:2.40.240.50 113 247 2.4E-45 T 14-10-2018 PhaeoP54_03458 7146c4ef08bb03a69f822320c48a64ec 350 Pfam PF03562 MltA specific insert domain 41 243 1.3E-64 T 14-10-2018 IPR005300 Lytic transglycosylase MltA, domain B GO:0004553 PhaeoP54_02413 5d04d06ffee71ad4639f9eca4e9873a2 358 SUPERFAMILY SSF51294 161 300 2.55E-19 T 14-10-2018 IPR036844 Hint domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 PhaeoP54_02413 5d04d06ffee71ad4639f9eca4e9873a2 358 Pfam PF13403 Hint domain 162 308 4.0E-50 T 14-10-2018 IPR028992 Hedgehog/Intein (Hint) domain PhaeoP54_01670 a68dc51d0466e4b00cc54707daef6ab8 503 Gene3D G3DSA:3.60.120.10 1 501 5.4E-172 T 14-10-2018 IPR005801 ADC synthase GO:0009058 PhaeoP54_01670 a68dc51d0466e4b00cc54707daef6ab8 503 Pfam PF00425 chorismate binding enzyme 230 483 7.3E-97 T 14-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal PhaeoP54_01670 a68dc51d0466e4b00cc54707daef6ab8 503 PRINTS PR00095 Anthranilate synthase component I signature 345 358 2.3E-23 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 PhaeoP54_01670 a68dc51d0466e4b00cc54707daef6ab8 503 PRINTS PR00095 Anthranilate synthase component I signature 425 439 2.3E-23 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 PhaeoP54_01670 a68dc51d0466e4b00cc54707daef6ab8 503 PRINTS PR00095 Anthranilate synthase component I signature 440 454 2.3E-23 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 PhaeoP54_01670 a68dc51d0466e4b00cc54707daef6ab8 503 PRINTS PR00095 Anthranilate synthase component I signature 331 344 2.3E-23 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 PhaeoP54_01670 a68dc51d0466e4b00cc54707daef6ab8 503 Pfam PF04715 Anthranilate synthase component I, N terminal region 29 173 9.5E-29 T 14-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 PhaeoP54_01670 a68dc51d0466e4b00cc54707daef6ab8 503 TIGRFAM TIGR00564 trpE_most: anthranilate synthase component I 29 491 7.5E-169 T 14-10-2018 IPR005256 Anthranilate synthase component I, PabB-like GO:0000162|GO:0004049 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 PhaeoP54_01670 a68dc51d0466e4b00cc54707daef6ab8 503 SUPERFAMILY SSF56322 20 490 5.36E-151 T 14-10-2018 IPR005801 ADC synthase GO:0009058 PhaeoP54_02483 9e9c0712178e307300ca3a49e2b502b2 159 Pfam PF00583 Acetyltransferase (GNAT) family 47 133 4.2E-10 T 14-10-2018 IPR000182 GNAT domain PhaeoP54_02483 9e9c0712178e307300ca3a49e2b502b2 159 Gene3D G3DSA:3.40.630.30 6 157 5.2E-35 T 14-10-2018 PhaeoP54_02483 9e9c0712178e307300ca3a49e2b502b2 159 SUPERFAMILY SSF55729 1 155 3.6E-22 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase PhaeoP54_00934 fc627b5b68abc76b41a09271d119a07c 83 Pfam PF10658 Protein of unknown function (DUF2484) 1 77 1.8E-37 T 14-10-2018 IPR018919 Protein of unknown function DUF2484 PhaeoP54_02940 9465d9a34444b9b42502ec41a8de6616 286 Gene3D G3DSA:3.30.470.10 1 120 2.2E-31 T 14-10-2018 PhaeoP54_02940 9465d9a34444b9b42502ec41a8de6616 286 Pfam PF01063 Amino-transferase class IV 31 256 2.1E-40 T 14-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 PhaeoP54_02940 9465d9a34444b9b42502ec41a8de6616 286 SUPERFAMILY SSF56752 3 280 9.16E-77 T 14-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 PhaeoP54_02940 9465d9a34444b9b42502ec41a8de6616 286 ProSitePatterns PS00770 Aminotransferases class-IV signature. 182 211 - T 14-10-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 PhaeoP54_02940 9465d9a34444b9b42502ec41a8de6616 286 Gene3D G3DSA:3.20.10.10 124 285 9.3E-54 T 14-10-2018 PhaeoP54_01338 c6b1b5ba765bf61d0f4e796869bfdf95 378 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 126 376 8.0E-28 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 PhaeoP54_01338 c6b1b5ba765bf61d0f4e796869bfdf95 378 Gene3D G3DSA:2.40.30.170 122 376 9.7E-43 T 14-10-2018 PhaeoP54_01338 c6b1b5ba765bf61d0f4e796869bfdf95 378 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 132 369 9.5E-23 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain PhaeoP54_01338 c6b1b5ba765bf61d0f4e796869bfdf95 378 Gene3D G3DSA:1.10.287.470 167 258 9.7E-43 T 14-10-2018 PhaeoP54_01338 c6b1b5ba765bf61d0f4e796869bfdf95 378 Gene3D G3DSA:2.40.50.100 133 300 9.7E-43 T 14-10-2018 PhaeoP54_01338 c6b1b5ba765bf61d0f4e796869bfdf95 378 SUPERFAMILY SSF111369 126 374 6.93E-17 T 14-10-2018 PhaeoP54_02741 b00f1fc940ea39c9485a186dd8356c09 212 Pfam PF01810 LysE type translocator 16 210 9.2E-13 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 PhaeoP54_01190 0c2715631b3a6f66266b34e80a88e574 125 SUPERFAMILY SSF46955 7 115 2.75E-21 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily PhaeoP54_01190 0c2715631b3a6f66266b34e80a88e574 125 Pfam PF09278 MerR, DNA binding 47 113 2.9E-13 T 14-10-2018 IPR015358 Transcription regulator MerR, DNA binding PhaeoP54_01190 0c2715631b3a6f66266b34e80a88e574 125 SMART SM00422 6 73 7.1E-9 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PhaeoP54_01190 0c2715631b3a6f66266b34e80a88e574 125 Gene3D G3DSA:1.10.1660.10 1 122 1.7E-21 T 14-10-2018 PhaeoP54_02893 81be48eb85903ce6705a777790d9096a 330 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 189 218 - T 14-10-2018 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 PhaeoP54_02893 81be48eb85903ce6705a777790d9096a 330 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 253 259 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 PhaeoP54_02893 81be48eb85903ce6705a777790d9096a 330 Gene3D G3DSA:3.40.50.150 143 327 5.3E-43 T 14-10-2018 PhaeoP54_02893 81be48eb85903ce6705a777790d9096a 330 Pfam PF05175 Methyltransferase small domain 158 321 3.5E-48 T 14-10-2018 IPR007848 Methyltransferase small domain GO:0008168 PhaeoP54_02893 81be48eb85903ce6705a777790d9096a 330 SUPERFAMILY SSF53335 171 322 5.48E-23 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PhaeoP54_03743 caa1a67ebd4b5405cf70ed60c0d7fc31 335 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 281 325 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 PhaeoP54_03743 caa1a67ebd4b5405cf70ed60c0d7fc31 335 SUPERFAMILY SSF46689 281 330 8.51E-5 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PhaeoP54_03743 caa1a67ebd4b5405cf70ed60c0d7fc31 335 SMART SM00342 244 329 2.2E-17 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PhaeoP54_03743 caa1a67ebd4b5405cf70ed60c0d7fc31 335 Gene3D G3DSA:1.10.10.60 229 333 9.9E-32 T 14-10-2018 PhaeoP54_03743 caa1a67ebd4b5405cf70ed60c0d7fc31 335 Pfam PF12833 Helix-turn-helix domain 250 330 3.4E-22 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PhaeoP54_03743 caa1a67ebd4b5405cf70ed60c0d7fc31 335 SUPERFAMILY SSF46689 229 277 8.87E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PhaeoP54_03743 caa1a67ebd4b5405cf70ed60c0d7fc31 335 Pfam PF14525 AraC-binding-like domain 27 207 4.0E-36 T 14-10-2018 IPR035418 Transcription regulator HTH, AraC- type, ligand binding domain-like PhaeoP54_03395 67c49e8ec9be14c7d883f6dbc1a340a4 283 Pfam PF13616 PPIC-type PPIASE domain 132 225 1.2E-23 T 14-10-2018 PhaeoP54_03395 67c49e8ec9be14c7d883f6dbc1a340a4 283 SUPERFAMILY SSF109998 30 165 4.32E-13 T 14-10-2018 IPR027304 Trigger factor/SurA domain superfamily PhaeoP54_03395 67c49e8ec9be14c7d883f6dbc1a340a4 283 SUPERFAMILY SSF54534 127 224 1.7E-32 T 14-10-2018 PhaeoP54_03395 67c49e8ec9be14c7d883f6dbc1a340a4 283 Gene3D G3DSA:3.10.50.40 131 249 8.1E-37 T 14-10-2018 PhaeoP54_03395 67c49e8ec9be14c7d883f6dbc1a340a4 283 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 164 184 - T 14-10-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 PhaeoP54_00392 ad74d3d4f3384f8c28b8b6dd7ca739bd 456 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 266 438 1.5E-12 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PhaeoP54_00392 ad74d3d4f3384f8c28b8b6dd7ca739bd 456 SUPERFAMILY SSF161098 242 429 1.96E-31 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_00392 ad74d3d4f3384f8c28b8b6dd7ca739bd 456 Gene3D G3DSA:1.10.3720.10 235 440 1.6E-28 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_00392 ad74d3d4f3384f8c28b8b6dd7ca739bd 456 TIGRFAM TIGR01097 PhnE: phosphonate ABC transporter, permease protein PhnE 220 438 2.2E-69 T 14-10-2018 IPR005769 ABC transporter, permease PhnE/PtxC GO:0005887|GO:0015604|GO:0015716 PhaeoP54_02896 d7be19007d1dd3c21fc6496ead120265 108 Gene3D G3DSA:3.30.429.10 1 103 1.4E-5 T 14-10-2018 IPR014347 Tautomerase/MIF superfamily PhaeoP54_02896 d7be19007d1dd3c21fc6496ead120265 108 SUPERFAMILY SSF55331 2 94 1.25E-5 T 14-10-2018 IPR014347 Tautomerase/MIF superfamily PhaeoP54_01093 8f0424789899ec0619f5c296ef67625b 263 Pfam PF02616 Segregation and condensation protein ScpA 42 130 1.7E-7 T 14-10-2018 IPR003768 Segregation and condensation protein A PhaeoP54_02878 c7c2c67d710f862eb04db09b5e4c4af3 318 Pfam PF00892 EamA-like transporter family 4 136 4.6E-13 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 PhaeoP54_02878 c7c2c67d710f862eb04db09b5e4c4af3 318 Pfam PF00892 EamA-like transporter family 145 275 2.0E-9 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 PhaeoP54_02878 c7c2c67d710f862eb04db09b5e4c4af3 318 SUPERFAMILY SSF103481 41 140 9.94E-12 T 14-10-2018 PhaeoP54_02878 c7c2c67d710f862eb04db09b5e4c4af3 318 SUPERFAMILY SSF103481 181 278 1.31E-11 T 14-10-2018 PhaeoP54_03611 73789cfe18fcb7f33d7f12aa534fd322 552 Pfam PF00732 GMC oxidoreductase 20 310 8.0E-77 T 14-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 PhaeoP54_03611 73789cfe18fcb7f33d7f12aa534fd322 552 Gene3D G3DSA:3.30.410.40 165 490 9.2E-153 T 14-10-2018 PhaeoP54_03611 73789cfe18fcb7f33d7f12aa534fd322 552 ProSitePatterns PS00624 GMC oxidoreductases signature 2. 269 283 - T 14-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 PhaeoP54_03611 73789cfe18fcb7f33d7f12aa534fd322 552 Gene3D G3DSA:3.50.50.60 20 548 9.2E-153 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PhaeoP54_03611 73789cfe18fcb7f33d7f12aa534fd322 552 ProSitePatterns PS00623 GMC oxidoreductases signature 1. 97 120 - T 14-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 PhaeoP54_03611 73789cfe18fcb7f33d7f12aa534fd322 552 Gene3D G3DSA:4.10.450.10 53 211 9.2E-153 T 14-10-2018 IPR027424 Glucose Oxidase, domain 2 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494|Reactome: R-HSA-6798163 PhaeoP54_03611 73789cfe18fcb7f33d7f12aa534fd322 552 PIRSF PIRSF000137 8 552 6.5E-129 T 14-10-2018 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 PhaeoP54_03611 73789cfe18fcb7f33d7f12aa534fd322 552 SUPERFAMILY SSF51905 20 550 2.59E-80 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PhaeoP54_03611 73789cfe18fcb7f33d7f12aa534fd322 552 Pfam PF05199 GMC oxidoreductase 407 544 1.3E-34 T 14-10-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 PhaeoP54_03611 73789cfe18fcb7f33d7f12aa534fd322 552 Gene3D G3DSA:1.10.1220.110 112 164 9.2E-153 T 14-10-2018 PhaeoP54_03611 73789cfe18fcb7f33d7f12aa534fd322 552 SUPERFAMILY SSF54373 305 493 2.94E-37 T 14-10-2018 PhaeoP54_01280 50163733d5795ffe7f05e05e22faf5e2 225 SMART SM00448 1 112 4.2E-34 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PhaeoP54_01280 50163733d5795ffe7f05e05e22faf5e2 225 Gene3D G3DSA:3.40.50.2300 1 121 4.2E-35 T 14-10-2018 PhaeoP54_01280 50163733d5795ffe7f05e05e22faf5e2 225 SUPERFAMILY SSF46894 127 224 9.92E-28 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PhaeoP54_01280 50163733d5795ffe7f05e05e22faf5e2 225 Gene3D G3DSA:1.10.10.10 123 225 1.4E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_01280 50163733d5795ffe7f05e05e22faf5e2 225 Pfam PF00072 Response regulator receiver domain 3 112 7.1E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PhaeoP54_01280 50163733d5795ffe7f05e05e22faf5e2 225 SUPERFAMILY SSF52172 1 118 1.57E-34 T 14-10-2018 IPR011006 CheY-like superfamily PhaeoP54_01280 50163733d5795ffe7f05e05e22faf5e2 225 Pfam PF00486 Transcriptional regulatory protein, C terminal 149 223 4.1E-24 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PhaeoP54_01280 50163733d5795ffe7f05e05e22faf5e2 225 SMART SM00862 148 223 7.0E-25 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PhaeoP54_03453 dbe203249039c1e40169178a1dbd8a39 197 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 5 180 3.1E-31 T 14-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 PhaeoP54_03453 dbe203249039c1e40169178a1dbd8a39 197 SUPERFAMILY SSF52540 1 191 3.55E-30 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_03453 dbe203249039c1e40169178a1dbd8a39 197 Pfam PF01121 Dephospho-CoA kinase 4 175 3.8E-36 T 14-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 PhaeoP54_03453 dbe203249039c1e40169178a1dbd8a39 197 Gene3D G3DSA:3.40.50.300 1 197 8.2E-52 T 14-10-2018 PhaeoP54_03453 dbe203249039c1e40169178a1dbd8a39 197 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 2 193 22.858 T 14-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 PhaeoP54_04058 96ebd4c233c14688e2300e30f782f484 184 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 1 171 5.0E-83 T 14-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 PhaeoP54_04058 96ebd4c233c14688e2300e30f782f484 184 SUPERFAMILY SSF51182 1 182 3.76E-74 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily PhaeoP54_04058 96ebd4c233c14688e2300e30f782f484 184 TIGRFAM TIGR01221 rmlC: dTDP-4-dehydrorhamnose 3,5-epimerase 3 175 8.6E-62 T 14-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 PhaeoP54_04058 96ebd4c233c14688e2300e30f782f484 184 Pfam PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase 6 175 2.1E-67 T 14-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 PhaeoP54_04058 96ebd4c233c14688e2300e30f782f484 184 Gene3D G3DSA:2.60.120.10 1 181 2.7E-67 T 14-10-2018 IPR014710 RmlC-like jelly roll fold PhaeoP54_03332 ff9cbda4703eaaf1c840f6bd6e73b310 263 Gene3D G3DSA:1.10.760.10 31 223 9.4E-68 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PhaeoP54_03332 ff9cbda4703eaaf1c840f6bd6e73b310 263 Gene3D G3DSA:1.20.5.100 224 262 1.3E-23 T 14-10-2018 PhaeoP54_03332 ff9cbda4703eaaf1c840f6bd6e73b310 263 SUPERFAMILY SSF46626 28 222 3.35E-44 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PhaeoP54_03332 ff9cbda4703eaaf1c840f6bd6e73b310 263 Pfam PF02167 Cytochrome C1 family 34 256 2.0E-68 T 14-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 PhaeoP54_03332 ff9cbda4703eaaf1c840f6bd6e73b310 263 PRINTS PR00603 Cytochrome C1 signature 173 184 1.4E-47 T 14-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 PhaeoP54_03332 ff9cbda4703eaaf1c840f6bd6e73b310 263 PRINTS PR00603 Cytochrome C1 signature 184 203 1.4E-47 T 14-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 PhaeoP54_03332 ff9cbda4703eaaf1c840f6bd6e73b310 263 PRINTS PR00603 Cytochrome C1 signature 32 51 1.4E-47 T 14-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 PhaeoP54_03332 ff9cbda4703eaaf1c840f6bd6e73b310 263 PRINTS PR00603 Cytochrome C1 signature 204 223 1.4E-47 T 14-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 PhaeoP54_03332 ff9cbda4703eaaf1c840f6bd6e73b310 263 PRINTS PR00603 Cytochrome C1 signature 52 71 1.4E-47 T 14-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 PhaeoP54_03332 ff9cbda4703eaaf1c840f6bd6e73b310 263 PRINTS PR00603 Cytochrome C1 signature 97 117 1.4E-47 T 14-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 PhaeoP54_03332 ff9cbda4703eaaf1c840f6bd6e73b310 263 PRINTS PR00603 Cytochrome C1 signature 223 238 1.4E-47 T 14-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 PhaeoP54_03332 ff9cbda4703eaaf1c840f6bd6e73b310 263 PRINTS PR00603 Cytochrome C1 signature 119 143 1.4E-47 T 14-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 PhaeoP54_00258 d10b4508017ee81851c41d47d7ceb782 314 Gene3D G3DSA:1.20.1420.30 34 307 2.1E-81 T 14-10-2018 PhaeoP54_00258 d10b4508017ee81851c41d47d7ceb782 314 TIGRFAM TIGR00367 TIGR00367: K+-dependent Na+/Ca+ exchanger homolog 9 309 9.5E-68 T 14-10-2018 IPR004481 Sodium/potassium/calcium exchanger Reactome: R-HSA-425561 PhaeoP54_00258 d10b4508017ee81851c41d47d7ceb782 314 Pfam PF01699 Sodium/calcium exchanger protein 4 139 6.9E-20 T 14-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 PhaeoP54_00258 d10b4508017ee81851c41d47d7ceb782 314 Pfam PF01699 Sodium/calcium exchanger protein 175 311 9.1E-31 T 14-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 PhaeoP54_00258 d10b4508017ee81851c41d47d7ceb782 314 Gene3D G3DSA:1.20.58.1130 9 205 2.1E-81 T 14-10-2018 PhaeoP54_03804 49c00747ded410e4add016742c4268d2 215 SUPERFAMILY SSF48498 87 206 7.56E-20 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily PhaeoP54_03804 49c00747ded410e4add016742c4268d2 215 Pfam PF00440 Bacterial regulatory proteins, tetR family 21 65 2.8E-14 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PhaeoP54_03804 49c00747ded410e4add016742c4268d2 215 SUPERFAMILY SSF46689 7 84 2.26E-18 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PhaeoP54_03804 49c00747ded410e4add016742c4268d2 215 ProSitePatterns PS01081 TetR-type HTH domain signature. 32 63 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site PhaeoP54_03804 49c00747ded410e4add016742c4268d2 215 Gene3D G3DSA:1.10.357.10 3 202 6.4E-46 T 14-10-2018 PhaeoP54_03804 49c00747ded410e4add016742c4268d2 215 Pfam PF13977 BetI-type transcriptional repressor, C-terminal 89 200 1.3E-16 T 14-10-2018 IPR039538 BetI-type transcriptional repressor, C-terminal PhaeoP54_03804 49c00747ded410e4add016742c4268d2 215 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 41 64 1.2E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PhaeoP54_03804 49c00747ded410e4add016742c4268d2 215 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 20 33 1.2E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PhaeoP54_01453 f36fa35e2c00df8cec2b92fa8db47adb 338 TIGRFAM TIGR00510 lipA: lipoyl synthase 37 328 1.2E-110 T 14-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 PhaeoP54_01453 f36fa35e2c00df8cec2b92fa8db47adb 338 SMART SM00729 92 301 4.2E-10 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 PhaeoP54_01453 f36fa35e2c00df8cec2b92fa8db47adb 338 Gene3D G3DSA:3.20.20.70 90 298 1.1E-16 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PhaeoP54_01453 f36fa35e2c00df8cec2b92fa8db47adb 338 SUPERFAMILY SSF102114 57 324 7.59E-60 T 14-10-2018 PhaeoP54_01453 f36fa35e2c00df8cec2b92fa8db47adb 338 PIRSF PIRSF005963 4 337 7.8E-131 T 14-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 PhaeoP54_01453 f36fa35e2c00df8cec2b92fa8db47adb 338 Pfam PF04055 Radical SAM superfamily 98 259 5.8E-9 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 PhaeoP54_01453 f36fa35e2c00df8cec2b92fa8db47adb 338 Pfam PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family 33 81 2.6E-7 T 14-10-2018 IPR031691 Lipoyl synthase, N-terminal KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 PhaeoP54_01453 f36fa35e2c00df8cec2b92fa8db47adb 338 Hamap MF_00206 Lipoyl synthase [lipA]. 44 332 146.809 T 14-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 PhaeoP54_01281 f29f403db81f14dbf0a6592fa5077142 476 SUPERFAMILY SSF47384 247 324 1.16E-10 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 PhaeoP54_01281 f29f403db81f14dbf0a6592fa5077142 476 SMART SM00388 263 325 6.4E-7 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PhaeoP54_01281 f29f403db81f14dbf0a6592fa5077142 476 SMART SM00387 370 476 9.4E-29 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PhaeoP54_01281 f29f403db81f14dbf0a6592fa5077142 476 Gene3D G3DSA:3.30.565.10 331 476 3.5E-28 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PhaeoP54_01281 f29f403db81f14dbf0a6592fa5077142 476 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 371 475 1.0E-16 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PhaeoP54_01281 f29f403db81f14dbf0a6592fa5077142 476 PRINTS PR00344 Bacterial sensor protein C-terminal signature 403 417 3.1E-7 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PhaeoP54_01281 f29f403db81f14dbf0a6592fa5077142 476 PRINTS PR00344 Bacterial sensor protein C-terminal signature 436 454 3.1E-7 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PhaeoP54_01281 f29f403db81f14dbf0a6592fa5077142 476 PRINTS PR00344 Bacterial sensor protein C-terminal signature 461 474 3.1E-7 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PhaeoP54_01281 f29f403db81f14dbf0a6592fa5077142 476 Gene3D G3DSA:1.10.287.130 213 326 1.7E-16 T 14-10-2018 PhaeoP54_01281 f29f403db81f14dbf0a6592fa5077142 476 SMART SM00304 209 262 3.3E-5 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 PhaeoP54_01281 f29f403db81f14dbf0a6592fa5077142 476 Pfam PF00512 His Kinase A (phospho-acceptor) domain 264 324 2.4E-7 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PhaeoP54_01281 f29f403db81f14dbf0a6592fa5077142 476 SUPERFAMILY SSF55874 317 474 9.04E-32 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PhaeoP54_01727 e7229825bee82ef095fc16d3dab60157 585 SMART SM00028 60 93 1.5 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 PhaeoP54_01727 e7229825bee82ef095fc16d3dab60157 585 SMART SM00028 26 59 130.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 PhaeoP54_01727 e7229825bee82ef095fc16d3dab60157 585 SMART SM00028 94 127 0.83 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 PhaeoP54_01727 e7229825bee82ef095fc16d3dab60157 585 Gene3D G3DSA:1.25.40.10 31 159 3.3E-18 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 PhaeoP54_01727 e7229825bee82ef095fc16d3dab60157 585 Pfam PF13844 Glycosyl transferase family 41 373 564 3.5E-56 T 14-10-2018 IPR029489 O-GlcNAc transferase, C-terminal KEGG: 00514+2.4.1.255|MetaCyc: PWY-7437|Reactome: R-HSA-3214847|Reactome: R-HSA-5689603 PhaeoP54_01727 e7229825bee82ef095fc16d3dab60157 585 Pfam PF13844 Glycosyl transferase family 41 212 365 7.5E-39 T 14-10-2018 IPR029489 O-GlcNAc transferase, C-terminal KEGG: 00514+2.4.1.255|MetaCyc: PWY-7437|Reactome: R-HSA-3214847|Reactome: R-HSA-5689603 PhaeoP54_01727 e7229825bee82ef095fc16d3dab60157 585 SUPERFAMILY SSF48452 26 164 1.87E-18 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 PhaeoP54_01727 e7229825bee82ef095fc16d3dab60157 585 Gene3D G3DSA:3.40.50.2000 369 548 2.8E-142 T 14-10-2018 PhaeoP54_01727 e7229825bee82ef095fc16d3dab60157 585 Gene3D G3DSA:3.40.50.11380 198 554 2.8E-142 T 14-10-2018 PhaeoP54_01838 966ffe47d5e65559a14d9217fa167183 1268 Gene3D G3DSA:3.30.2090.10 178 270 2.2E-132 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PhaeoP54_01838 966ffe47d5e65559a14d9217fa167183 1268 Gene3D G3DSA:3.30.70.1440 978 1019 2.3E-55 T 14-10-2018 PhaeoP54_01838 966ffe47d5e65559a14d9217fa167183 1268 SUPERFAMILY SSF82866 891 1190 3.4E-42 T 14-10-2018 PhaeoP54_01838 966ffe47d5e65559a14d9217fa167183 1268 Gene3D G3DSA:3.30.70.1440 754 917 9.9E-35 T 14-10-2018 PhaeoP54_01838 966ffe47d5e65559a14d9217fa167183 1268 Gene3D G3DSA:1.20.1640.10 495 528 2.2E-132 T 14-10-2018 PhaeoP54_01838 966ffe47d5e65559a14d9217fa167183 1268 PRINTS PR00702 Acriflavin resistance protein family signature 11 35 3.0E-27 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PhaeoP54_01838 966ffe47d5e65559a14d9217fa167183 1268 PRINTS PR00702 Acriflavin resistance protein family signature 358 379 3.0E-27 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PhaeoP54_01838 966ffe47d5e65559a14d9217fa167183 1268 PRINTS PR00702 Acriflavin resistance protein family signature 386 410 3.0E-27 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PhaeoP54_01838 966ffe47d5e65559a14d9217fa167183 1268 PRINTS PR00702 Acriflavin resistance protein family signature 439 462 3.0E-27 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PhaeoP54_01838 966ffe47d5e65559a14d9217fa167183 1268 PRINTS PR00702 Acriflavin resistance protein family signature 39 57 3.0E-27 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PhaeoP54_01838 966ffe47d5e65559a14d9217fa167183 1268 PRINTS PR00702 Acriflavin resistance protein family signature 464 487 3.0E-27 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PhaeoP54_01838 966ffe47d5e65559a14d9217fa167183 1268 Gene3D G3DSA:3.30.70.1430 41 134 2.2E-132 T 14-10-2018 PhaeoP54_01838 966ffe47d5e65559a14d9217fa167183 1268 SUPERFAMILY SSF82693 41 135 3.92E-19 T 14-10-2018 PhaeoP54_01838 966ffe47d5e65559a14d9217fa167183 1268 Gene3D G3DSA:3.30.70.1320 135 327 2.2E-132 T 14-10-2018 PhaeoP54_01838 966ffe47d5e65559a14d9217fa167183 1268 Gene3D G3DSA:1.20.1640.10 591 633 9.9E-35 T 14-10-2018 PhaeoP54_01838 966ffe47d5e65559a14d9217fa167183 1268 Gene3D G3DSA:1.20.1640.10 1020 1187 2.3E-55 T 14-10-2018 PhaeoP54_01838 966ffe47d5e65559a14d9217fa167183 1268 SUPERFAMILY SSF82693 137 318 1.08E-13 T 14-10-2018 PhaeoP54_01838 966ffe47d5e65559a14d9217fa167183 1268 SUPERFAMILY SSF82714 183 264 4.58E-11 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PhaeoP54_01838 966ffe47d5e65559a14d9217fa167183 1268 Gene3D G3DSA:1.20.1640.10 15 494 2.2E-132 T 14-10-2018 PhaeoP54_01838 966ffe47d5e65559a14d9217fa167183 1268 Pfam PF00873 AcrB/AcrD/AcrF family 996 1188 2.0E-33 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PhaeoP54_01838 966ffe47d5e65559a14d9217fa167183 1268 Pfam PF00873 AcrB/AcrD/AcrF family 14 489 1.3E-91 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PhaeoP54_01838 966ffe47d5e65559a14d9217fa167183 1268 Pfam PF00873 AcrB/AcrD/AcrF family 608 918 1.2E-17 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PhaeoP54_01838 966ffe47d5e65559a14d9217fa167183 1268 Gene3D G3DSA:3.30.2090.10 952 970 2.3E-55 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PhaeoP54_01838 966ffe47d5e65559a14d9217fa167183 1268 Gene3D G3DSA:3.30.2090.10 805 893 9.9E-35 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PhaeoP54_01838 966ffe47d5e65559a14d9217fa167183 1268 SUPERFAMILY SSF82866 288 489 1.7E-36 T 14-10-2018 PhaeoP54_01838 966ffe47d5e65559a14d9217fa167183 1268 Gene3D G3DSA:3.30.70.1430 634 753 9.9E-35 T 14-10-2018 PhaeoP54_02791 c3318be4b0c280cae2eb517b61afe653 655 SUPERFAMILY SSF53955 486 639 1.13E-36 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily PhaeoP54_02791 c3318be4b0c280cae2eb517b61afe653 655 Pfam PF01464 Transglycosylase SLT domain 491 594 6.5E-20 T 14-10-2018 IPR008258 Transglycosylase SLT domain 1 PhaeoP54_02791 c3318be4b0c280cae2eb517b61afe653 655 SUPERFAMILY SSF48435 30 469 2.09E-59 T 14-10-2018 IPR008939 Lytic transglycosylase, superhelical U-shaped GO:0004553|GO:0042597 PhaeoP54_02791 c3318be4b0c280cae2eb517b61afe653 655 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 499 527 - T 14-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 PhaeoP54_02791 c3318be4b0c280cae2eb517b61afe653 655 Gene3D G3DSA:1.10.530.10 477 637 8.4E-37 T 14-10-2018 PhaeoP54_00711 7016923f4835f67a21fb27b9bf37f9bb 89 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 37 68 4.6E-14 T 14-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 PhaeoP54_00711 7016923f4835f67a21fb27b9bf37f9bb 89 Gene3D G3DSA:1.20.120.910 1 72 1.0E-20 T 14-10-2018 PhaeoP54_00711 7016923f4835f67a21fb27b9bf37f9bb 89 SUPERFAMILY SSF57716 39 69 3.56E-7 T 14-10-2018 PhaeoP54_01654 f230bfdda9acd1d67f6fbaee32bb0419 316 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 108 312 7.4E-21 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PhaeoP54_01654 f230bfdda9acd1d67f6fbaee32bb0419 316 SUPERFAMILY SSF161098 76 304 1.83E-64 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_01654 f230bfdda9acd1d67f6fbaee32bb0419 316 Gene3D G3DSA:1.10.3720.10 72 315 3.4E-75 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_03776 b9b6ba1604ff1922d4e9f398cb78701d 166 Gene3D G3DSA:2.40.50.870 24 166 1.2E-43 T 14-10-2018 PhaeoP54_03776 b9b6ba1604ff1922d4e9f398cb78701d 166 Pfam PF11736 Protein of unknown function (DUF3299) 31 162 2.4E-36 T 14-10-2018 IPR021727 Protein of unknown function DUF3299 PhaeoP54_02105 b04b4026094679c30d5fd01d0c942daa 258 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 23 254 2.6E-61 T 14-10-2018 IPR006214 Bax inhibitor 1-related PhaeoP54_01639 a2cc1aa693781c270907e727c2ccd902 306 Pfam PF02653 Branched-chain amino acid transport system / permease component 10 294 1.0E-41 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 PhaeoP54_02228 92cd360ecc2a29543a1a19b30bebd53f 225 Pfam PF07947 YhhN family 36 222 2.4E-34 T 14-10-2018 IPR012506 YhhN-like GO:0016021 PhaeoP54_03213 2552c7a03f74e117e46e561e4f6aca96 309 Pfam PF00950 ABC 3 transport family 160 271 1.4E-18 T 14-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 PhaeoP54_03213 2552c7a03f74e117e46e561e4f6aca96 309 Pfam PF00950 ABC 3 transport family 14 131 1.7E-22 T 14-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 PhaeoP54_03213 2552c7a03f74e117e46e561e4f6aca96 309 SUPERFAMILY SSF81345 7 276 4.45E-25 T 14-10-2018 IPR037294 ABC transporter, BtuC-like PhaeoP54_03349 784fdc25ea30f684f1d31593510fb9b7 233 Gene3D G3DSA:3.40.50.2300 2 131 3.0E-36 T 14-10-2018 PhaeoP54_03349 784fdc25ea30f684f1d31593510fb9b7 233 SUPERFAMILY SSF46894 131 231 1.11E-21 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PhaeoP54_03349 784fdc25ea30f684f1d31593510fb9b7 233 Pfam PF00072 Response regulator receiver domain 9 116 1.5E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PhaeoP54_03349 784fdc25ea30f684f1d31593510fb9b7 233 Gene3D G3DSA:1.10.10.10 132 233 8.1E-29 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_03349 784fdc25ea30f684f1d31593510fb9b7 233 SUPERFAMILY SSF52172 6 125 2.42E-39 T 14-10-2018 IPR011006 CheY-like superfamily PhaeoP54_03349 784fdc25ea30f684f1d31593510fb9b7 233 Pfam PF00486 Transcriptional regulatory protein, C terminal 155 230 2.4E-21 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PhaeoP54_03349 784fdc25ea30f684f1d31593510fb9b7 233 SMART SM00862 154 230 7.3E-19 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PhaeoP54_03349 784fdc25ea30f684f1d31593510fb9b7 233 SMART SM00448 6 116 4.4E-42 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PhaeoP54_00664 371d49e648409ab27eefd578ea6cb701 121 Gene3D G3DSA:1.10.720.90 2 55 5.1E-22 T 14-10-2018 PhaeoP54_00664 371d49e648409ab27eefd578ea6cb701 121 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 117 28.214 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PhaeoP54_00664 371d49e648409ab27eefd578ea6cb701 121 PRINTS PR00062 Ribosomal protein L20 signature 12 41 1.0E-36 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PhaeoP54_00664 371d49e648409ab27eefd578ea6cb701 121 PRINTS PR00062 Ribosomal protein L20 signature 42 71 1.0E-36 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PhaeoP54_00664 371d49e648409ab27eefd578ea6cb701 121 PRINTS PR00062 Ribosomal protein L20 signature 77 103 1.0E-36 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PhaeoP54_00664 371d49e648409ab27eefd578ea6cb701 121 Gene3D G3DSA:1.10.1900.20 56 120 3.0E-27 T 14-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PhaeoP54_00664 371d49e648409ab27eefd578ea6cb701 121 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PhaeoP54_00664 371d49e648409ab27eefd578ea6cb701 121 SUPERFAMILY SSF74731 3 119 3.14E-46 T 14-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PhaeoP54_00664 371d49e648409ab27eefd578ea6cb701 121 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 115 1.3E-47 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PhaeoP54_00664 371d49e648409ab27eefd578ea6cb701 121 Pfam PF00453 Ribosomal protein L20 3 110 1.5E-46 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PhaeoP54_00664 371d49e648409ab27eefd578ea6cb701 121 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 21 72 2.0E-23 T 14-10-2018 PhaeoP54_01806 aaf14e154d3ec86638bbda34bc4243f3 556 SUPERFAMILY SSF53613 282 552 3.79E-59 T 14-10-2018 IPR029056 Ribokinase-like PhaeoP54_01806 aaf14e154d3ec86638bbda34bc4243f3 556 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 282 551 1.7E-52 T 14-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 PhaeoP54_01806 aaf14e154d3ec86638bbda34bc4243f3 556 Pfam PF03853 YjeF-related protein N-terminus 27 218 8.5E-32 T 14-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 PhaeoP54_01806 aaf14e154d3ec86638bbda34bc4243f3 556 TIGRFAM TIGR00197 yjeF_nterm: YjeF family N-terminal domain 5 238 4.3E-32 T 14-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 PhaeoP54_01806 aaf14e154d3ec86638bbda34bc4243f3 556 SUPERFAMILY SSF64153 4 245 1.27E-50 T 14-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 PhaeoP54_01806 aaf14e154d3ec86638bbda34bc4243f3 556 Pfam PF01256 Carbohydrate kinase 295 533 4.0E-49 T 14-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 PhaeoP54_01806 aaf14e154d3ec86638bbda34bc4243f3 556 PIRSF PIRSF017184 2 554 1.0E-93 T 14-10-2018 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 PhaeoP54_01806 aaf14e154d3ec86638bbda34bc4243f3 556 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 271 555 18.165 T 14-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 PhaeoP54_01806 aaf14e154d3ec86638bbda34bc4243f3 556 Gene3D G3DSA:3.40.1190.20 277 555 4.1E-67 T 14-10-2018 IPR029056 Ribokinase-like PhaeoP54_01806 aaf14e154d3ec86638bbda34bc4243f3 556 Hamap MF_01966 NAD(P)H-hydrate epimerase [nnrE]. 6 239 23.681 T 14-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 PhaeoP54_01806 aaf14e154d3ec86638bbda34bc4243f3 556 ProSitePatterns PS01050 YjeF C-terminal domain signature 2. 495 505 - T 14-10-2018 IPR017953 Carbohydrate kinase, predicted, conserved site PhaeoP54_01806 aaf14e154d3ec86638bbda34bc4243f3 556 Gene3D G3DSA:3.40.50.10260 2 241 2.0E-52 T 14-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 PhaeoP54_00962 05e80378cd8c989c6bfee09578561fd5 259 Gene3D G3DSA:3.40.50.880 1 250 1.9E-58 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like PhaeoP54_00962 05e80378cd8c989c6bfee09578561fd5 259 Pfam PF07722 Peptidase C26 6 223 2.8E-58 T 14-10-2018 IPR011697 Peptidase C26 GO:0016787 Reactome: R-HSA-6798695 PhaeoP54_00962 05e80378cd8c989c6bfee09578561fd5 259 SUPERFAMILY SSF52317 4 247 2.45E-37 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like PhaeoP54_00892 4bbc18091d1ae9d2bab62a5c58e86f1c 253 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 1 251 46.58 T 14-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 PhaeoP54_00892 4bbc18091d1ae9d2bab62a5c58e86f1c 253 Pfam PF00977 Histidine biosynthesis protein 5 235 9.9E-89 T 14-10-2018 IPR006062 Histidine biosynthesis GO:0000105 PhaeoP54_00892 4bbc18091d1ae9d2bab62a5c58e86f1c 253 Gene3D G3DSA:3.20.20.70 1 253 1.4E-108 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PhaeoP54_00892 4bbc18091d1ae9d2bab62a5c58e86f1c 253 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 1 251 4.8E-105 T 14-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 PhaeoP54_00892 4bbc18091d1ae9d2bab62a5c58e86f1c 253 SUPERFAMILY SSF51366 1 251 5.49E-87 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 PhaeoP54_00114 b167a3f0f02c92d6a37085fefe90c2c9 282 Pfam PF00877 NlpC/P60 family 167 251 1.3E-15 T 14-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain PhaeoP54_00114 b167a3f0f02c92d6a37085fefe90c2c9 282 SUPERFAMILY SSF54001 144 280 1.54E-32 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily PhaeoP54_00114 b167a3f0f02c92d6a37085fefe90c2c9 282 Gene3D G3DSA:3.90.1720.10 73 268 8.9E-25 T 14-10-2018 PhaeoP54_01999 55bd67d202c2a616f9031a6537e95b2e 340 Pfam PF13478 XdhC Rossmann domain 190 331 6.0E-41 T 14-10-2018 IPR027051 XdhC Rossmann domain PhaeoP54_01999 55bd67d202c2a616f9031a6537e95b2e 340 Pfam PF02625 XdhC and CoxI family 33 98 2.5E-24 T 14-10-2018 IPR003777 XdhC- CoxI PhaeoP54_01999 55bd67d202c2a616f9031a6537e95b2e 340 Gene3D G3DSA:3.40.50.720 189 337 4.2E-49 T 14-10-2018 PhaeoP54_00253 af5ffc8921315c6b34b1d84f12710142 218 SUPERFAMILY SSF51735 1 213 2.84E-24 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PhaeoP54_00253 af5ffc8921315c6b34b1d84f12710142 218 Pfam PF13460 NAD(P)H-binding 7 193 4.2E-21 T 14-10-2018 IPR016040 NAD(P)-binding domain PhaeoP54_00253 af5ffc8921315c6b34b1d84f12710142 218 Gene3D G3DSA:3.40.50.720 3 216 3.0E-37 T 14-10-2018 PhaeoP54_02002 296ef3a6d7f6c48b982a67364768e9b2 609 Pfam PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus 113 285 4.8E-74 T 14-10-2018 IPR010941 Poly-beta-hydroxybutyrate polymerase, N-terminal domain GO:0042619 PhaeoP54_02002 296ef3a6d7f6c48b982a67364768e9b2 609 TIGRFAM TIGR01838 PHA_synth_I: poly(R)-hydroxyalkanoic acid synthase, class I 66 600 1.1E-220 T 14-10-2018 IPR010963 Poly(R)-hydroxyalkanoic acid synthase, class I GO:0005737|GO:0016746|GO:0042619 PhaeoP54_02002 296ef3a6d7f6c48b982a67364768e9b2 609 SUPERFAMILY SSF53474 241 533 4.86E-34 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold PhaeoP54_01215 7919a8b8fe1b5319828b9aaa5df11ad7 552 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 14 177 8.4E-41 T 14-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 PhaeoP54_01215 7919a8b8fe1b5319828b9aaa5df11ad7 552 Gene3D G3DSA:3.40.50.1220 189 345 9.2E-30 T 14-10-2018 PhaeoP54_01215 7919a8b8fe1b5319828b9aaa5df11ad7 552 Gene3D G3DSA:3.40.50.970 5 184 8.8E-48 T 14-10-2018 PhaeoP54_01215 7919a8b8fe1b5319828b9aaa5df11ad7 552 Gene3D G3DSA:3.40.50.970 370 549 2.1E-42 T 14-10-2018 PhaeoP54_01215 7919a8b8fe1b5319828b9aaa5df11ad7 552 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 395 540 3.0E-29 T 14-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 PhaeoP54_01215 7919a8b8fe1b5319828b9aaa5df11ad7 552 SUPERFAMILY SSF52518 374 546 2.64E-43 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold PhaeoP54_01215 7919a8b8fe1b5319828b9aaa5df11ad7 552 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 198 334 1.8E-19 T 14-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 PhaeoP54_01215 7919a8b8fe1b5319828b9aaa5df11ad7 552 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 432 451 - T 14-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 PhaeoP54_01215 7919a8b8fe1b5319828b9aaa5df11ad7 552 SUPERFAMILY SSF52467 163 336 2.62E-29 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily PhaeoP54_01215 7919a8b8fe1b5319828b9aaa5df11ad7 552 SUPERFAMILY SSF52518 13 189 4.98E-40 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold PhaeoP54_01216 fd1f83a4665e972f5a408654c3bc0764 179 SUPERFAMILY SSF103247 49 172 1.18E-22 T 14-10-2018 IPR035923 TT1751-like domain superfamily PhaeoP54_01216 fd1f83a4665e972f5a408654c3bc0764 179 Pfam PF03625 Domain of unknown function DUF302 84 138 4.7E-8 T 14-10-2018 IPR005180 Domain of unknown function DUF302 PhaeoP54_01216 fd1f83a4665e972f5a408654c3bc0764 179 Gene3D G3DSA:3.30.310.70 50 173 5.6E-7 T 14-10-2018 IPR035923 TT1751-like domain superfamily PhaeoP54_02901 baafadcec75f7c88e78e73bcc0e02984 479 Pfam PF13746 4Fe-4S dicluster domain 210 313 3.0E-39 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PhaeoP54_02901 baafadcec75f7c88e78e73bcc0e02984 479 Gene3D G3DSA:3.30.70.20 210 281 5.4E-5 T 14-10-2018 PhaeoP54_02901 baafadcec75f7c88e78e73bcc0e02984 479 Gene3D G3DSA:2.60.40.10 356 473 3.2E-8 T 14-10-2018 IPR013783 Immunoglobulin-like fold PhaeoP54_02901 baafadcec75f7c88e78e73bcc0e02984 479 TIGRFAM TIGR02745 ccoG_rdxA_fixG: cytochrome c oxidase accessory protein CcoG 26 471 1.2E-168 T 14-10-2018 IPR014116 Cytochrome c oxidase cbb3 type, accessory protein FixG GO:0016021|GO:0055114 PhaeoP54_02901 baafadcec75f7c88e78e73bcc0e02984 479 SUPERFAMILY SSF54862 95 361 6.11E-31 T 14-10-2018 PhaeoP54_02901 baafadcec75f7c88e78e73bcc0e02984 479 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 262 273 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PhaeoP54_02901 baafadcec75f7c88e78e73bcc0e02984 479 Pfam PF12801 4Fe-4S binding domain 87 124 3.6E-8 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PhaeoP54_02901 baafadcec75f7c88e78e73bcc0e02984 479 Pfam PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase 353 474 2.8E-24 T 14-10-2018 IPR032879 FixG, C-terminal immunoglobulin-like domain PhaeoP54_00001 4c5fc6089fe78c0d27501558f644526f 475 SMART SM00760 383 452 3.8E-43 T 14-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 PhaeoP54_00001 4c5fc6089fe78c0d27501558f644526f 475 SUPERFAMILY SSF52540 134 351 2.17E-40 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_00001 4c5fc6089fe78c0d27501558f644526f 475 Pfam PF00308 Bacterial dnaA protein 135 356 9.7E-86 T 14-10-2018 IPR013317 Chromosomal replication initiator protein DnaA PhaeoP54_00001 4c5fc6089fe78c0d27501558f644526f 475 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 3 474 31.074 T 14-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 PhaeoP54_00001 4c5fc6089fe78c0d27501558f644526f 475 Gene3D G3DSA:1.10.8.60 301 375 3.2E-17 T 14-10-2018 PhaeoP54_00001 4c5fc6089fe78c0d27501558f644526f 475 Gene3D G3DSA:3.40.50.300 119 299 1.7E-50 T 14-10-2018 PhaeoP54_00001 4c5fc6089fe78c0d27501558f644526f 475 Pfam PF11638 DnaA N-terminal domain 5 62 2.0E-13 T 14-10-2018 IPR024633 DnaA N-terminal domain PhaeoP54_00001 4c5fc6089fe78c0d27501558f644526f 475 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 6 473 4.3E-161 T 14-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 PhaeoP54_00001 4c5fc6089fe78c0d27501558f644526f 475 SMART SM00382 167 297 6.6E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_00001 4c5fc6089fe78c0d27501558f644526f 475 SUPERFAMILY SSF48295 372 474 7.59E-37 T 14-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 PhaeoP54_00001 4c5fc6089fe78c0d27501558f644526f 475 ProSitePatterns PS01008 DnaA protein signature. 433 452 - T 14-10-2018 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 PhaeoP54_00001 4c5fc6089fe78c0d27501558f644526f 475 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 168 188 1.6E-45 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like PhaeoP54_00001 4c5fc6089fe78c0d27501558f644526f 475 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 232 246 1.6E-45 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like PhaeoP54_00001 4c5fc6089fe78c0d27501558f644526f 475 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 200 214 1.6E-45 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like PhaeoP54_00001 4c5fc6089fe78c0d27501558f644526f 475 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 433 452 1.6E-45 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like PhaeoP54_00001 4c5fc6089fe78c0d27501558f644526f 475 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 266 293 1.6E-45 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like PhaeoP54_00001 4c5fc6089fe78c0d27501558f644526f 475 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 384 452 1.9E-30 T 14-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 PhaeoP54_00001 4c5fc6089fe78c0d27501558f644526f 475 Gene3D G3DSA:1.10.1750.10 376 474 8.9E-35 T 14-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 PhaeoP54_00001 4c5fc6089fe78c0d27501558f644526f 475 Gene3D G3DSA:3.30.300.180 3 100 3.3E-10 T 14-10-2018 IPR038454 DnaA, N-terminal domain superfamily PhaeoP54_01579 12825ed40bda88f423d539fb2cdf6bf5 440 Pfam PF02653 Branched-chain amino acid transport system / permease component 166 429 5.7E-30 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 PhaeoP54_02234 00fb75c8bddc5cc783b1ed412c763878 591 SUPERFAMILY SSF158837 289 358 1.57E-11 T 14-10-2018 IPR023157 AGR-C-984p-like superfamily PhaeoP54_02234 00fb75c8bddc5cc783b1ed412c763878 591 SUPERFAMILY SSF158837 129 211 4.71E-19 T 14-10-2018 IPR023157 AGR-C-984p-like superfamily PhaeoP54_02234 00fb75c8bddc5cc783b1ed412c763878 591 SUPERFAMILY SSF158837 224 286 3.4E-12 T 14-10-2018 IPR023157 AGR-C-984p-like superfamily PhaeoP54_02234 00fb75c8bddc5cc783b1ed412c763878 591 Pfam PF06748 Protein of unknown function (DUF1217) 68 121 2.1E-15 T 14-10-2018 IPR010626 Protein of unknown function DUF1217 PhaeoP54_02234 00fb75c8bddc5cc783b1ed412c763878 591 Pfam PF06748 Protein of unknown function (DUF1217) 153 210 5.7E-11 T 14-10-2018 IPR010626 Protein of unknown function DUF1217 PhaeoP54_02234 00fb75c8bddc5cc783b1ed412c763878 591 Pfam PF06748 Protein of unknown function (DUF1217) 320 356 5.6E-5 T 14-10-2018 IPR010626 Protein of unknown function DUF1217 PhaeoP54_02234 00fb75c8bddc5cc783b1ed412c763878 591 Pfam PF06748 Protein of unknown function (DUF1217) 248 288 1.3E-6 T 14-10-2018 IPR010626 Protein of unknown function DUF1217 PhaeoP54_02234 00fb75c8bddc5cc783b1ed412c763878 591 Pfam PF06748 Protein of unknown function (DUF1217) 398 544 2.4E-31 T 14-10-2018 IPR010626 Protein of unknown function DUF1217 PhaeoP54_02234 00fb75c8bddc5cc783b1ed412c763878 591 Gene3D G3DSA:1.10.3700.10 222 288 2.6E-12 T 14-10-2018 IPR023157 AGR-C-984p-like superfamily PhaeoP54_02234 00fb75c8bddc5cc783b1ed412c763878 591 Gene3D G3DSA:1.10.3700.10 289 371 4.9E-11 T 14-10-2018 IPR023157 AGR-C-984p-like superfamily PhaeoP54_02234 00fb75c8bddc5cc783b1ed412c763878 591 Gene3D G3DSA:1.10.3700.10 130 216 1.9E-18 T 14-10-2018 IPR023157 AGR-C-984p-like superfamily PhaeoP54_02234 00fb75c8bddc5cc783b1ed412c763878 591 Gene3D G3DSA:1.10.3700.10 373 575 1.9E-40 T 14-10-2018 IPR023157 AGR-C-984p-like superfamily PhaeoP54_02234 00fb75c8bddc5cc783b1ed412c763878 591 Gene3D G3DSA:1.10.3700.10 4 129 1.1E-34 T 14-10-2018 IPR023157 AGR-C-984p-like superfamily PhaeoP54_02234 00fb75c8bddc5cc783b1ed412c763878 591 SUPERFAMILY SSF158837 10 124 5.1E-37 T 14-10-2018 IPR023157 AGR-C-984p-like superfamily PhaeoP54_02234 00fb75c8bddc5cc783b1ed412c763878 591 SUPERFAMILY SSF158837 381 574 7.59E-35 T 14-10-2018 IPR023157 AGR-C-984p-like superfamily PhaeoP54_01325 49373525ed1e655654a9001bf6ce733e 974 SUPERFAMILY SSF50249 36 310 5.15E-16 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold PhaeoP54_01325 49373525ed1e655654a9001bf6ce733e 974 Gene3D G3DSA:3.40.1260.20 586 691 1.2E-30 T 14-10-2018 PhaeoP54_01325 49373525ed1e655654a9001bf6ce733e 974 Gene3D G3DSA:2.40.50.140 214 304 2.2E-13 T 14-10-2018 PhaeoP54_01325 49373525ed1e655654a9001bf6ce733e 974 Gene3D G3DSA:2.40.50.140 32 133 4.9E-25 T 14-10-2018 PhaeoP54_01325 49373525ed1e655654a9001bf6ce733e 974 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 10 610 1.5E-155 T 14-10-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 PhaeoP54_01325 49373525ed1e655654a9001bf6ce733e 974 Pfam PF00575 S1 RNA binding domain 35 78 2.0E-4 T 14-10-2018 IPR003029 S1 domain GO:0003676 PhaeoP54_01325 49373525ed1e655654a9001bf6ce733e 974 Hamap MF_00970 Ribonuclease E [rne]. 1 973 32.812 T 14-10-2018 IPR028878 Ribonuclease E GO:0006396|GO:0008995 PhaeoP54_01325 49373525ed1e655654a9001bf6ce733e 974 Pfam PF10150 Ribonuclease E/G family 306 576 1.3E-92 T 14-10-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 PhaeoP54_02999 355f38c25935dd2057db03007995aa89 126 TIGRFAM TIGR00494 crcB: protein CrcB 6 119 1.6E-24 T 14-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 PhaeoP54_02999 355f38c25935dd2057db03007995aa89 126 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 6 117 5.4E-22 T 14-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 PhaeoP54_02999 355f38c25935dd2057db03007995aa89 126 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 5 122 19.141 T 14-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 PhaeoP54_03653 e3d5ca202d4494f376da11481a0968ce 349 Pfam PF04235 Protein of unknown function (DUF418) 242 348 2.7E-13 T 14-10-2018 IPR007349 Domain of unknown function DUF418 PhaeoP54_03653 e3d5ca202d4494f376da11481a0968ce 349 Pfam PF07786 Protein of unknown function (DUF1624) 8 199 8.7E-10 T 14-10-2018 IPR012429 Domain of unknown function DUF1624 Reactome: R-HSA-2024096|Reactome: R-HSA-2206291|Reactome: R-HSA-6798695 PhaeoP54_02536 afe70da618cbf4f7f851fe9df8afc69e 213 Gene3D G3DSA:3.40.50.1110 23 212 7.3E-61 T 14-10-2018 IPR036514 SGNH hydrolase superfamily PhaeoP54_02536 afe70da618cbf4f7f851fe9df8afc69e 213 SUPERFAMILY SSF52266 20 207 1.4E-44 T 14-10-2018 PhaeoP54_02536 afe70da618cbf4f7f851fe9df8afc69e 213 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 26 192 1.1E-20 T 14-10-2018 IPR013830 SGNH hydrolase-type esterase domain PhaeoP54_00591 ccdc61ad7ee75bcbb721bb91e7c74ca8 209 TIGRFAM TIGR02428 pcaJ_scoB_fam: 3-oxoacid CoA-transferase, B subunit 3 207 1.3E-98 T 14-10-2018 IPR012791 3-oxoacid CoA-transferase, subunit B GO:0008410 Reactome: R-HSA-77108 PhaeoP54_00591 ccdc61ad7ee75bcbb721bb91e7c74ca8 209 Gene3D G3DSA:3.40.1080.10 2 208 1.3E-95 T 14-10-2018 PhaeoP54_00591 ccdc61ad7ee75bcbb721bb91e7c74ca8 209 Pfam PF01144 Coenzyme A transferase 7 184 7.4E-39 T 14-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 PhaeoP54_00591 ccdc61ad7ee75bcbb721bb91e7c74ca8 209 SUPERFAMILY SSF100950 3 206 1.65E-69 T 14-10-2018 IPR037171 NagB/RpiA transferase-like PhaeoP54_00591 ccdc61ad7ee75bcbb721bb91e7c74ca8 209 SMART SM00882 6 202 5.0E-76 T 14-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 PhaeoP54_01852 c28117a2b1346d0a01179f1c72ee4b4f 418 SUPERFAMILY SSF48452 175 291 8.59E-5 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 PhaeoP54_01852 c28117a2b1346d0a01179f1c72ee4b4f 418 Gene3D G3DSA:1.25.40.10 163 298 2.0E-9 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 PhaeoP54_01852 c28117a2b1346d0a01179f1c72ee4b4f 418 TIGRFAM TIGR03142 cytochro_ccmI: cytochrome c-type biogenesis protein CcmI 2 118 1.1E-22 T 14-10-2018 IPR017560 Cytochrome c-type biogenesis protein CcmI PhaeoP54_01326 e338ce9c2ca1ba6514dc6d872ba1fa8a 144 Gene3D G3DSA:3.10.450.50 7 133 1.0E-16 T 14-10-2018 PhaeoP54_01326 e338ce9c2ca1ba6514dc6d872ba1fa8a 144 SUPERFAMILY SSF54427 12 131 2.39E-21 T 14-10-2018 IPR032710 NTF2-like domain superfamily PhaeoP54_01326 e338ce9c2ca1ba6514dc6d872ba1fa8a 144 Pfam PF14534 Domain of unknown function (DUF4440) 20 124 1.8E-13 T 14-10-2018 IPR027843 Domain of unknown function DUF4440 PhaeoP54_01149 74ebf17260060a575415122bd44627ea 289 Pfam PF02219 Methylenetetrahydrofolate reductase 5 277 6.6E-82 T 14-10-2018 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 PhaeoP54_01149 74ebf17260060a575415122bd44627ea 289 TIGRFAM TIGR00676 fadh2: methylenetetrahydrofolate reductase [NAD(P)H] 6 276 5.5E-90 T 14-10-2018 IPR004620 5,10-methylenetetrahydrofolate reductase GO:0004489|GO:0005829|GO:0009086|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841 PhaeoP54_01149 74ebf17260060a575415122bd44627ea 289 Gene3D G3DSA:3.20.20.220 1 288 2.0E-88 T 14-10-2018 PhaeoP54_01149 74ebf17260060a575415122bd44627ea 289 SUPERFAMILY SSF51730 4 280 5.1E-87 T 14-10-2018 IPR029041 FAD-linked oxidoreductase-like PhaeoP54_03150 81143e89fbcc0eb9ae166c98d15bfb73 404 SMART SM00044 169 385 1.9E-4 T 14-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 PhaeoP54_03150 81143e89fbcc0eb9ae166c98d15bfb73 404 SUPERFAMILY SSF55073 215 402 1.88E-44 T 14-10-2018 IPR029787 Nucleotide cyclase PhaeoP54_03150 81143e89fbcc0eb9ae166c98d15bfb73 404 Gene3D G3DSA:3.30.70.1230 211 403 1.1E-43 T 14-10-2018 IPR029787 Nucleotide cyclase PhaeoP54_03150 81143e89fbcc0eb9ae166c98d15bfb73 404 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 223 397 9.3E-21 T 14-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 PhaeoP54_02823 508f045bb4471d2035562cf69669a745 403 Gene3D G3DSA:3.30.390.30 318 403 7.0E-29 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 PhaeoP54_02823 508f045bb4471d2035562cf69669a745 403 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 145 163 6.3E-22 T 14-10-2018 PhaeoP54_02823 508f045bb4471d2035562cf69669a745 403 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 99 117 6.3E-22 T 14-10-2018 PhaeoP54_02823 508f045bb4471d2035562cf69669a745 403 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 256 278 6.3E-22 T 14-10-2018 PhaeoP54_02823 508f045bb4471d2035562cf69669a745 403 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 231 247 6.3E-22 T 14-10-2018 PhaeoP54_02823 508f045bb4471d2035562cf69669a745 403 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 6.3E-22 T 14-10-2018 PhaeoP54_02823 508f045bb4471d2035562cf69669a745 403 SUPERFAMILY SSF51905 146 334 3.24E-34 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PhaeoP54_02823 508f045bb4471d2035562cf69669a745 403 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 299 4.5E-61 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PhaeoP54_02823 508f045bb4471d2035562cf69669a745 403 SUPERFAMILY SSF55424 311 402 1.14E-26 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 PhaeoP54_02823 508f045bb4471d2035562cf69669a745 403 Pfam PF14759 Reductase C-terminal 318 401 9.8E-30 T 14-10-2018 IPR028202 Reductase, C-terminal PhaeoP54_02823 508f045bb4471d2035562cf69669a745 403 Gene3D G3DSA:3.50.50.60 5 307 2.4E-109 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PhaeoP54_02823 508f045bb4471d2035562cf69669a745 403 SUPERFAMILY SSF51905 2 191 4.49E-45 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PhaeoP54_02823 508f045bb4471d2035562cf69669a745 403 Gene3D G3DSA:3.50.50.60 112 238 2.4E-109 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PhaeoP54_02823 508f045bb4471d2035562cf69669a745 403 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 3 25 6.8E-16 T 14-10-2018 PhaeoP54_02823 508f045bb4471d2035562cf69669a745 403 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 145 170 6.8E-16 T 14-10-2018 PhaeoP54_02823 508f045bb4471d2035562cf69669a745 403 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 271 278 6.8E-16 T 14-10-2018 PhaeoP54_02823 508f045bb4471d2035562cf69669a745 403 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 232 246 6.8E-16 T 14-10-2018 PhaeoP54_01365 1f7cb90a2c9328de100d736588cab2f1 151 Pfam PF07366 SnoaL-like polyketide cyclase 8 122 1.6E-9 T 14-10-2018 IPR009959 Polyketide cyclase SnoaL-like GO:0030638 MetaCyc: PWY-7352|MetaCyc: PWY-7354 PhaeoP54_01365 1f7cb90a2c9328de100d736588cab2f1 151 SUPERFAMILY SSF54427 5 137 9.21E-16 T 14-10-2018 IPR032710 NTF2-like domain superfamily PhaeoP54_01365 1f7cb90a2c9328de100d736588cab2f1 151 Gene3D G3DSA:3.10.450.50 2 131 6.9E-15 T 14-10-2018 PhaeoP54_02403 ca29a68e822e9aad7b9b9e35b8640e52 655 SUPERFAMILY SSF103088 527 652 6.93E-28 T 14-10-2018 IPR036737 OmpA-like domain superfamily PhaeoP54_02403 ca29a68e822e9aad7b9b9e35b8640e52 655 Pfam PF00691 OmpA family 538 646 5.9E-20 T 14-10-2018 IPR006665 OmpA-like domain PhaeoP54_02403 ca29a68e822e9aad7b9b9e35b8640e52 655 Gene3D G3DSA:3.30.1330.60 484 655 1.1E-44 T 14-10-2018 IPR036737 OmpA-like domain superfamily PhaeoP54_02063 8c68dc6f6d2d2cac52766ecb47984aee 200 Pfam PF13468 Glyoxalase-like domain 3 170 2.7E-40 T 14-10-2018 IPR025870 Glyoxalase-like domain PhaeoP54_02063 8c68dc6f6d2d2cac52766ecb47984aee 200 Gene3D G3DSA:3.10.180.10 1 144 3.4E-6 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PhaeoP54_04001 d3f302e8772492130aec7535ffbafd16 909 Pfam PF03432 Relaxase/Mobilisation nuclease domain 115 211 1.2E-8 T 14-10-2018 IPR005094 Endonuclease relaxase, MobA/VirD2 PhaeoP54_01568 40a5f226b25b687e2ef11134a7171388 173 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 88 122 2.6E-11 T 14-10-2018 IPR001451 Hexapeptide repeat PhaeoP54_01568 40a5f226b25b687e2ef11134a7171388 173 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 60 81 0.05 T 14-10-2018 IPR001451 Hexapeptide repeat PhaeoP54_01568 40a5f226b25b687e2ef11134a7171388 173 SUPERFAMILY SSF51161 2 169 2.5E-50 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily PhaeoP54_01568 40a5f226b25b687e2ef11134a7171388 173 Gene3D G3DSA:2.160.10.10 1 173 1.1E-66 T 14-10-2018 PhaeoP54_00155 70cdfa5c32644e216ff971889edb8429 72 Gene3D G3DSA:2.40.50.140 1 72 1.1E-34 T 14-10-2018 PhaeoP54_00155 70cdfa5c32644e216ff971889edb8429 72 SMART SM00316 4 72 0.0028 T 14-10-2018 IPR022967 RNA-binding domain, S1 PhaeoP54_00155 70cdfa5c32644e216ff971889edb8429 72 Pfam PF01176 Translation initiation factor 1A / IF-1 8 70 9.9E-27 T 14-10-2018 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 PhaeoP54_00155 70cdfa5c32644e216ff971889edb8429 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 26.625 T 14-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 PhaeoP54_00155 70cdfa5c32644e216ff971889edb8429 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 70 3.1E-32 T 14-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 PhaeoP54_00155 70cdfa5c32644e216ff971889edb8429 72 SUPERFAMILY SSF50249 1 71 1.32E-26 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold PhaeoP54_02421 33b672fa4af9649b1757520e09638961 151 Pfam PF02082 Transcriptional regulator 1 80 2.6E-22 T 14-10-2018 IPR000944 Transcription regulator Rrf2-type PhaeoP54_02421 33b672fa4af9649b1757520e09638961 151 SUPERFAMILY SSF46785 2 133 9.1E-34 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_02421 33b672fa4af9649b1757520e09638961 151 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 131 7.8E-29 T 14-10-2018 IPR000944 Transcription regulator Rrf2-type PhaeoP54_02421 33b672fa4af9649b1757520e09638961 151 Gene3D G3DSA:1.10.10.10 1 142 1.7E-33 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_02857 167626ad15ce3b0ece7aa245c92dcd0d 402 Gene3D G3DSA:3.90.230.10 159 401 1.1E-50 T 14-10-2018 PhaeoP54_02857 167626ad15ce3b0ece7aa245c92dcd0d 402 Pfam PF01321 Creatinase/Prolidase N-terminal domain 28 157 6.5E-11 T 14-10-2018 IPR000587 Creatinase, N-terminal GO:0016787 PhaeoP54_02857 167626ad15ce3b0ece7aa245c92dcd0d 402 Gene3D G3DSA:3.40.350.10 4 156 1.1E-45 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal PhaeoP54_02857 167626ad15ce3b0ece7aa245c92dcd0d 402 Pfam PF00557 Metallopeptidase family M24 166 382 6.2E-25 T 14-10-2018 IPR000994 Peptidase M24 PhaeoP54_02857 167626ad15ce3b0ece7aa245c92dcd0d 402 SUPERFAMILY SSF53092 4 156 2.09E-44 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal PhaeoP54_02857 167626ad15ce3b0ece7aa245c92dcd0d 402 SUPERFAMILY SSF55920 159 397 3.4E-58 T 14-10-2018 IPR036005 Creatinase/aminopeptidase-like PhaeoP54_01994 4de4ca0eec2a8eef4074c3ca05d176a1 213 Gene3D G3DSA:1.10.287.950 24 211 5.3E-18 T 14-10-2018 PhaeoP54_01994 4de4ca0eec2a8eef4074c3ca05d176a1 213 SUPERFAMILY SSF58104 136 210 2.09E-19 T 14-10-2018 PhaeoP54_01994 4de4ca0eec2a8eef4074c3ca05d176a1 213 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 150 202 2.6E-13 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 PhaeoP54_01994 4de4ca0eec2a8eef4074c3ca05d176a1 213 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 157 184 9.7E-9 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 PhaeoP54_01994 4de4ca0eec2a8eef4074c3ca05d176a1 213 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 186 213 9.7E-9 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 PhaeoP54_02966 ede6a6aba91e9e3da7a718f6921180df 252 Gene3D G3DSA:3.40.630.40 13 251 4.4E-78 T 14-10-2018 PhaeoP54_02966 ede6a6aba91e9e3da7a718f6921180df 252 PIRSF PIRSF029730 1 252 4.1E-86 T 14-10-2018 IPR011227 Uncharacterised conserved protein UCP029730 PhaeoP54_02966 ede6a6aba91e9e3da7a718f6921180df 252 Pfam PF05013 N-formylglutamate amidohydrolase 24 227 4.7E-38 T 14-10-2018 IPR007709 N-formylglutamate amidohydrolase PhaeoP54_02966 ede6a6aba91e9e3da7a718f6921180df 252 SUPERFAMILY SSF53187 8 249 3.77E-69 T 14-10-2018 PhaeoP54_01284 32439bbe2508194e184d188d359c566f 304 Pfam PF00753 Metallo-beta-lactamase superfamily 35 216 1.3E-16 T 14-10-2018 IPR001279 Metallo-beta-lactamase PhaeoP54_01284 32439bbe2508194e184d188d359c566f 304 SUPERFAMILY SSF56281 16 285 2.94E-54 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like PhaeoP54_01284 32439bbe2508194e184d188d359c566f 304 Gene3D G3DSA:3.60.15.10 13 221 6.7E-41 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like PhaeoP54_01284 32439bbe2508194e184d188d359c566f 304 Gene3D G3DSA:1.10.10.10 223 296 2.7E-9 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_01284 32439bbe2508194e184d188d359c566f 304 SMART SM00849 36 216 1.4E-26 T 14-10-2018 IPR001279 Metallo-beta-lactamase PhaeoP54_00205 cfbec3dfd51e098a6f61de5c51202cea 279 Gene3D G3DSA:1.20.1080.10 31 277 2.1E-36 T 14-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 PhaeoP54_00205 cfbec3dfd51e098a6f61de5c51202cea 279 Pfam PF01226 Formate/nitrite transporter 32 269 5.0E-44 T 14-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 PhaeoP54_00396 8c467cca9d088ff5938ee2445163f0f4 198 TIGRFAM TIGR03292 PhnH_redo: phosphonate C-P lyase system protein PhnH 14 188 1.2E-43 T 14-10-2018 IPR008772 Bacterial phosphonate metabolism, PhnH GO:0019634 PhaeoP54_00396 8c467cca9d088ff5938ee2445163f0f4 198 SUPERFAMILY SSF159709 20 190 8.76E-51 T 14-10-2018 IPR038058 PhnH-like superfamily PhaeoP54_00396 8c467cca9d088ff5938ee2445163f0f4 198 PIRSF PIRSF020680 4 196 4.6E-40 T 14-10-2018 IPR008772 Bacterial phosphonate metabolism, PhnH GO:0019634 PhaeoP54_00396 8c467cca9d088ff5938ee2445163f0f4 198 Gene3D G3DSA:3.40.50.11310 9 191 1.8E-43 T 14-10-2018 IPR038058 PhnH-like superfamily PhaeoP54_00396 8c467cca9d088ff5938ee2445163f0f4 198 Pfam PF05845 Bacterial phosphonate metabolism protein (PhnH) 13 190 1.1E-49 T 14-10-2018 IPR008772 Bacterial phosphonate metabolism, PhnH GO:0019634 PhaeoP54_00935 706ab29165208a5034e1354fdcb2a19b 307 Gene3D G3DSA:3.30.465.10 82 206 5.2E-31 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 PhaeoP54_00935 706ab29165208a5034e1354fdcb2a19b 307 SUPERFAMILY SSF56194 191 302 2.09E-34 T 14-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 PhaeoP54_00935 706ab29165208a5034e1354fdcb2a19b 307 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 192 300 1.2E-26 T 14-10-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 PhaeoP54_00935 706ab29165208a5034e1354fdcb2a19b 307 Gene3D G3DSA:3.90.78.10 207 306 1.7E-27 T 14-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 PhaeoP54_00935 706ab29165208a5034e1354fdcb2a19b 307 SUPERFAMILY SSF56176 15 199 4.91E-40 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 PhaeoP54_00935 706ab29165208a5034e1354fdcb2a19b 307 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 21 299 1.3E-49 T 14-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 PhaeoP54_00935 706ab29165208a5034e1354fdcb2a19b 307 Gene3D G3DSA:3.30.43.10 4 78 2.4E-20 T 14-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 PhaeoP54_00935 706ab29165208a5034e1354fdcb2a19b 307 Pfam PF01565 FAD binding domain 29 156 6.1E-19 T 14-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 PhaeoP54_00935 706ab29165208a5034e1354fdcb2a19b 307 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 307 83.934 T 14-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 PhaeoP54_03177 c76bc8bd07a74641bad88d66b10c9417 198 Pfam PF01794 Ferric reductase like transmembrane component 49 159 1.4E-17 T 14-10-2018 IPR013130 Ferric reductase transmembrane component-like domain PhaeoP54_03177 c76bc8bd07a74641bad88d66b10c9417 198 Hamap MF_01207 Protein-methionine-sulfoxide reductase heme-binding subunit MsrQ [msrQ]. 8 194 20.992 T 14-10-2018 IPR022837 Protein-methionine-sulfoxide reductase subunit MsrQ GO:0005887|GO:0030091 PhaeoP54_01665 f7f4f0c656db52c4836ce7323939acca 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 236 9.2E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_01665 f7f4f0c656db52c4836ce7323939acca 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 160 179 9.2E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_01665 f7f4f0c656db52c4836ce7323939acca 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 85 96 9.2E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_01665 f7f4f0c656db52c4836ce7323939acca 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 181 198 9.2E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_01665 f7f4f0c656db52c4836ce7323939acca 272 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 253 1.9E-92 T 14-10-2018 PhaeoP54_01665 f7f4f0c656db52c4836ce7323939acca 272 PIRSF PIRSF000094 3 261 1.0E-113 T 14-10-2018 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 PhaeoP54_01665 f7f4f0c656db52c4836ce7323939acca 272 SUPERFAMILY SSF51735 8 256 1.2E-69 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PhaeoP54_01665 f7f4f0c656db52c4836ce7323939acca 272 Gene3D G3DSA:3.40.50.720 2 272 1.4E-62 T 14-10-2018 PhaeoP54_01765 95fb97f530b62fb5781b3e00565ba7ec 1330 Pfam PF13550 Putative phage tail protein 802 951 4.9E-32 T 14-10-2018 IPR032876 Tip attachment protein J PhaeoP54_01765 95fb97f530b62fb5781b3e00565ba7ec 1330 Pfam PF13547 GTA TIM-barrel-like domain 446 741 7.2E-147 T 14-10-2018 IPR025195 GTA TIM-barrel-like domain PhaeoP54_01765 95fb97f530b62fb5781b3e00565ba7ec 1330 SUPERFAMILY SSF51445 409 733 4.44E-9 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily PhaeoP54_00403 f139bb2df13ce36d175694b566b1b7fd 227 Pfam PF06299 Protein of unknown function (DUF1045) 61 217 4.0E-52 T 14-10-2018 IPR009389 Protein of unknown function DUF1045 KEGG: 00030+2.7.4.23|MetaCyc: PWY-7805|MetaCyc: PWY-7807 PhaeoP54_00403 f139bb2df13ce36d175694b566b1b7fd 227 PIRSF PIRSF033328 4 227 2.2E-50 T 14-10-2018 IPR009389 Protein of unknown function DUF1045 KEGG: 00030+2.7.4.23|MetaCyc: PWY-7805|MetaCyc: PWY-7807 PhaeoP54_02383 cc12b81758b4a26821260c49b5b98452 147 Gene3D G3DSA:3.10.129.10 3 145 7.2E-43 T 14-10-2018 PhaeoP54_02383 cc12b81758b4a26821260c49b5b98452 147 SUPERFAMILY SSF54637 10 144 7.48E-42 T 14-10-2018 IPR029069 HotDog domain superfamily PhaeoP54_02383 cc12b81758b4a26821260c49b5b98452 147 Pfam PF01575 MaoC like domain 23 118 2.2E-25 T 14-10-2018 IPR002539 MaoC-like dehydratase domain PhaeoP54_04022 b8a62a01aaf03b42a74f03c12abf7158 160 SUPERFAMILY SSF50199 49 155 2.88E-20 T 14-10-2018 PhaeoP54_04022 b8a62a01aaf03b42a74f03c12abf7158 160 Gene3D G3DSA:2.40.50.90 46 147 7.6E-19 T 14-10-2018 IPR035437 SNase-like, OB-fold superfamily PhaeoP54_04022 b8a62a01aaf03b42a74f03c12abf7158 160 SMART SM00318 51 160 2.8E-4 T 14-10-2018 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold Reactome: R-HSA-6802952 PhaeoP54_04022 b8a62a01aaf03b42a74f03c12abf7158 160 Pfam PF00565 Staphylococcal nuclease homologue 74 151 3.3E-9 T 14-10-2018 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold Reactome: R-HSA-6802952 PhaeoP54_03272 fd566072100730ef1f478d7b60ca83dc 163 Pfam PF03734 L,D-transpeptidase catalytic domain 14 158 7.7E-13 T 14-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 PhaeoP54_03272 fd566072100730ef1f478d7b60ca83dc 163 SUPERFAMILY SSF141523 13 158 6.28E-9 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like PhaeoP54_00948 12bcc660fb03d0df40ae4fbb19b1dce1 328 Pfam PF08406 CbbQ/NirQ/NorQ C-terminal 242 293 8.1E-5 T 14-10-2018 IPR013615 CbbQ/NirQ/NorQ, C-terminal PhaeoP54_00948 12bcc660fb03d0df40ae4fbb19b1dce1 328 Pfam PF07728 AAA domain (dynein-related subfamily) 67 191 4.3E-14 T 14-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 PhaeoP54_00948 12bcc660fb03d0df40ae4fbb19b1dce1 328 TIGRFAM TIGR01650 PD_CobS: cobaltochelatase, CobS subunit 9 325 4.8E-178 T 14-10-2018 IPR006537 Cobaltochelatase subunit CobS KEGG: 00860+6.6.1.2|MetaCyc: PWY-7376 PhaeoP54_00948 12bcc660fb03d0df40ae4fbb19b1dce1 328 Gene3D G3DSA:3.40.50.300 51 230 2.8E-22 T 14-10-2018 PhaeoP54_00948 12bcc660fb03d0df40ae4fbb19b1dce1 328 SUPERFAMILY SSF52540 56 289 3.11E-30 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_00948 12bcc660fb03d0df40ae4fbb19b1dce1 328 Pfam PF12556 Cobaltochelatase CobS subunit N terminal 8 40 1.1E-14 T 14-10-2018 IPR025865 Cobaltochelatase subunit CobS N-terminal domain KEGG: 00860+6.6.1.2|MetaCyc: PWY-7376 PhaeoP54_00039 7abd1bc7315dc9d5bf1603e2d5e9d14a 269 Pfam PF01614 Bacterial transcriptional regulator 128 241 1.5E-20 T 14-10-2018 IPR014757 Transcription regulator IclR, C-terminal PhaeoP54_00039 7abd1bc7315dc9d5bf1603e2d5e9d14a 269 Pfam PF09339 IclR helix-turn-helix domain 3 54 1.1E-10 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 PhaeoP54_00039 7abd1bc7315dc9d5bf1603e2d5e9d14a 269 SUPERFAMILY SSF55781 59 244 1.63E-32 T 14-10-2018 PhaeoP54_00039 7abd1bc7315dc9d5bf1603e2d5e9d14a 269 Gene3D G3DSA:1.10.10.10 1 73 1.6E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_00039 7abd1bc7315dc9d5bf1603e2d5e9d14a 269 SMART SM00346 1 91 7.7E-11 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 PhaeoP54_00039 7abd1bc7315dc9d5bf1603e2d5e9d14a 269 SUPERFAMILY SSF46785 2 71 1.91E-14 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_00039 7abd1bc7315dc9d5bf1603e2d5e9d14a 269 Gene3D G3DSA:3.30.450.40 81 256 1.3E-39 T 14-10-2018 IPR029016 GAF-like domain superfamily PhaeoP54_03916 b1467d8ec911dc101311fd84783b943f 99 Pfam PF09981 Uncharacterized protein conserved in bacteria (DUF2218) 6 92 6.4E-31 T 14-10-2018 IPR014543 Uncharacterised conserved protein UCP028291 PhaeoP54_03916 b1467d8ec911dc101311fd84783b943f 99 Gene3D G3DSA:3.30.310.50 1 96 7.7E-31 T 14-10-2018 PhaeoP54_03916 b1467d8ec911dc101311fd84783b943f 99 PIRSF PIRSF028291 1 97 1.0E-26 T 14-10-2018 IPR014543 Uncharacterised conserved protein UCP028291 PhaeoP54_00454 b9bf8d3632a84e617e2fb53081fd5975 449 ProSitePatterns PS00104 EPSP synthase signature 1. 95 109 - T 14-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 PhaeoP54_00454 b9bf8d3632a84e617e2fb53081fd5975 449 Gene3D G3DSA:3.65.10.10 28 241 1.9E-136 T 14-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 PhaeoP54_00454 b9bf8d3632a84e617e2fb53081fd5975 449 Gene3D G3DSA:3.65.10.10 19 436 1.9E-136 T 14-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 PhaeoP54_00454 b9bf8d3632a84e617e2fb53081fd5975 449 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 16 444 30.427 T 14-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 PhaeoP54_00454 b9bf8d3632a84e617e2fb53081fd5975 449 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 20 443 4.8E-118 T 14-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 PhaeoP54_00454 b9bf8d3632a84e617e2fb53081fd5975 449 PIRSF PIRSF000505 7 448 5.1E-115 T 14-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 PhaeoP54_00454 b9bf8d3632a84e617e2fb53081fd5975 449 SUPERFAMILY SSF55205 13 444 2.45E-115 T 14-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 PhaeoP54_00454 b9bf8d3632a84e617e2fb53081fd5975 449 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 16 435 4.7E-98 T 14-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 PhaeoP54_00454 b9bf8d3632a84e617e2fb53081fd5975 449 ProSitePatterns PS00885 EPSP synthase signature 2. 352 370 - T 14-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 PhaeoP54_00345 949f36acff5a1946c03df40667ccdc9d 123 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 6 110 2.1E-12 T 14-10-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 PhaeoP54_00345 949f36acff5a1946c03df40667ccdc9d 123 SUPERFAMILY SSF81343 12 117 1.07E-21 T 14-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 PhaeoP54_00345 949f36acff5a1946c03df40667ccdc9d 123 Gene3D G3DSA:1.20.1300.10 11 120 2.5E-17 T 14-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 PhaeoP54_00345 949f36acff5a1946c03df40667ccdc9d 123 TIGRFAM TIGR02968 succ_dehyd_anc: succinate dehydrogenase, hydrophobic membrane anchor protein 16 116 3.1E-13 T 14-10-2018 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 PhaeoP54_02963 f615b890f938614729483851c6743e85 385 Gene3D G3DSA:3.40.50.2300 143 271 4.9E-69 T 14-10-2018 PhaeoP54_02963 f615b890f938614729483851c6743e85 385 Gene3D G3DSA:3.40.50.2300 25 340 4.9E-69 T 14-10-2018 PhaeoP54_02963 f615b890f938614729483851c6743e85 385 Pfam PF13458 Periplasmic binding protein 24 364 6.1E-59 T 14-10-2018 IPR028081 Leucine-binding protein domain PhaeoP54_02963 f615b890f938614729483851c6743e85 385 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 46 62 4.4E-6 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 PhaeoP54_02963 f615b890f938614729483851c6743e85 385 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 253 271 4.4E-6 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 PhaeoP54_02963 f615b890f938614729483851c6743e85 385 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 24 40 4.4E-6 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 PhaeoP54_02963 f615b890f938614729483851c6743e85 385 SUPERFAMILY SSF53822 23 370 9.59E-70 T 14-10-2018 IPR028082 Periplasmic binding protein-like I PhaeoP54_02068 2b58c28d7ebb512a89acb5acdce484a7 696 SUPERFAMILY SSF51246 346 480 2.04E-37 T 14-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 PhaeoP54_02068 2b58c28d7ebb512a89acb5acdce484a7 696 Pfam PF00289 Biotin carboxylase, N-terminal domain 16 124 4.2E-44 T 14-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 PhaeoP54_02068 2b58c28d7ebb512a89acb5acdce484a7 696 SUPERFAMILY SSF56059 98 363 3.71E-70 T 14-10-2018 PhaeoP54_02068 2b58c28d7ebb512a89acb5acdce484a7 696 SUPERFAMILY SSF52440 12 128 7.91E-49 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily PhaeoP54_02068 2b58c28d7ebb512a89acb5acdce484a7 696 Gene3D G3DSA:3.30.1490.20 146 217 1.8E-30 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 PhaeoP54_02068 2b58c28d7ebb512a89acb5acdce484a7 696 Gene3D G3DSA:2.40.50.100 628 696 8.5E-22 T 14-10-2018 PhaeoP54_02068 2b58c28d7ebb512a89acb5acdce484a7 696 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 652 669 - T 14-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 PhaeoP54_02068 2b58c28d7ebb512a89acb5acdce484a7 696 Gene3D G3DSA:3.30.470.20 218 473 6.1E-109 T 14-10-2018 PhaeoP54_02068 2b58c28d7ebb512a89acb5acdce484a7 696 SUPERFAMILY SSF51230 617 696 2.09E-20 T 14-10-2018 IPR011053 Single hybrid motif PhaeoP54_02068 2b58c28d7ebb512a89acb5acdce484a7 696 SMART SM00878 351 477 4.6E-57 T 14-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 PhaeoP54_02068 2b58c28d7ebb512a89acb5acdce484a7 696 Pfam PF02785 Biotin carboxylase C-terminal domain 351 478 1.4E-32 T 14-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 PhaeoP54_02068 2b58c28d7ebb512a89acb5acdce484a7 696 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 301 308 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 PhaeoP54_02068 2b58c28d7ebb512a89acb5acdce484a7 696 Gene3D G3DSA:3.30.700.30 484 616 1.7E-55 T 14-10-2018 PhaeoP54_02068 2b58c28d7ebb512a89acb5acdce484a7 696 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 130 337 9.4E-82 T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 PhaeoP54_02068 2b58c28d7ebb512a89acb5acdce484a7 696 Gene3D G3DSA:3.40.50.20 16 145 8.6E-55 T 14-10-2018 PhaeoP54_02068 2b58c28d7ebb512a89acb5acdce484a7 696 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 168 182 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 PhaeoP54_02068 2b58c28d7ebb512a89acb5acdce484a7 696 Pfam PF00364 Biotin-requiring enzyme 632 694 1.8E-17 T 14-10-2018 IPR000089 Biotin/lipoyl attachment PhaeoP54_00029 02278c21643618580d077bfc1a39ecf5 359 SUPERFAMILY SSF53850 115 351 1.59E-26 T 14-10-2018 PhaeoP54_00029 02278c21643618580d077bfc1a39ecf5 359 SMART SM00257 28 78 0.005 T 14-10-2018 IPR018392 LysM domain PhaeoP54_00029 02278c21643618580d077bfc1a39ecf5 359 Gene3D G3DSA:3.10.350.10 27 76 2.6E-6 T 14-10-2018 IPR036779 LysM domain superfamily PhaeoP54_00029 02278c21643618580d077bfc1a39ecf5 359 SMART SM00062 116 355 0.0058 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PhaeoP54_00029 02278c21643618580d077bfc1a39ecf5 359 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 193 350 8.5E-16 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PhaeoP54_00029 02278c21643618580d077bfc1a39ecf5 359 Gene3D G3DSA:3.40.190.10 123 349 3.8E-17 T 14-10-2018 PhaeoP54_00029 02278c21643618580d077bfc1a39ecf5 359 Gene3D G3DSA:3.40.190.10 210 310 3.8E-17 T 14-10-2018 PhaeoP54_00029 02278c21643618580d077bfc1a39ecf5 359 Pfam PF01476 LysM domain 29 76 5.2E-5 T 14-10-2018 IPR018392 LysM domain PhaeoP54_01532 844371016f010aa772012329ecab5e40 552 Gene3D G3DSA:3.40.50.2000 346 525 2.0E-125 T 14-10-2018 PhaeoP54_01532 844371016f010aa772012329ecab5e40 552 Pfam PF13844 Glycosyl transferase family 41 189 335 1.2E-32 T 14-10-2018 IPR029489 O-GlcNAc transferase, C-terminal KEGG: 00514+2.4.1.255|MetaCyc: PWY-7437|Reactome: R-HSA-3214847|Reactome: R-HSA-5689603 PhaeoP54_01532 844371016f010aa772012329ecab5e40 552 Pfam PF13844 Glycosyl transferase family 41 348 543 1.0E-40 T 14-10-2018 IPR029489 O-GlcNAc transferase, C-terminal KEGG: 00514+2.4.1.255|MetaCyc: PWY-7437|Reactome: R-HSA-3214847|Reactome: R-HSA-5689603 PhaeoP54_01532 844371016f010aa772012329ecab5e40 552 Gene3D G3DSA:1.25.40.10 13 148 9.8E-13 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 PhaeoP54_01532 844371016f010aa772012329ecab5e40 552 SUPERFAMILY SSF48452 13 133 4.81E-10 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 PhaeoP54_01532 844371016f010aa772012329ecab5e40 552 Gene3D G3DSA:3.40.50.11380 174 531 2.0E-125 T 14-10-2018 PhaeoP54_01290 d7c5c26cbd02ff63ef4ecea6c7b5c52b 173 SMART SM00903 26 168 8.1E-51 T 14-10-2018 IPR002563 Flavin reductase like domain GO:0010181 PhaeoP54_01290 d7c5c26cbd02ff63ef4ecea6c7b5c52b 173 Gene3D G3DSA:2.30.110.10 3 172 4.7E-43 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 PhaeoP54_01290 d7c5c26cbd02ff63ef4ecea6c7b5c52b 173 Pfam PF01613 Flavin reductase like domain 27 169 1.2E-29 T 14-10-2018 IPR002563 Flavin reductase like domain GO:0010181 PhaeoP54_01290 d7c5c26cbd02ff63ef4ecea6c7b5c52b 173 SUPERFAMILY SSF50475 19 167 8.34E-42 T 14-10-2018 PhaeoP54_00639 daa7f6bfc754ada1b2b7e379033e6f5b 157 SUPERFAMILY SSF89095 1 151 2.09E-38 T 14-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 PhaeoP54_00639 daa7f6bfc754ada1b2b7e379033e6f5b 157 Pfam PF09424 Yqey-like protein 5 151 5.1E-49 T 14-10-2018 IPR019004 Uncharacterised protein YqeY/AIM41 PhaeoP54_00639 daa7f6bfc754ada1b2b7e379033e6f5b 157 Gene3D G3DSA:1.10.1510.10 1 95 2.2E-24 T 14-10-2018 PhaeoP54_00639 daa7f6bfc754ada1b2b7e379033e6f5b 157 Gene3D G3DSA:1.10.10.410 96 152 1.5E-17 T 14-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal PhaeoP54_02048 f70e3bc72ae6937e712ce82f170413c4 271 Gene3D G3DSA:1.20.120.330 17 151 1.6E-6 T 14-10-2018 PhaeoP54_02048 f70e3bc72ae6937e712ce82f170413c4 271 SUPERFAMILY SSF81593 19 81 5.49E-5 T 14-10-2018 PhaeoP54_01853 431d27ecd0b649055cdf8be617ee4c0c 157 SUPERFAMILY SSF53098 19 152 1.02E-42 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily PhaeoP54_01853 431d27ecd0b649055cdf8be617ee4c0c 157 SMART SM00732 17 117 2.3E-36 T 14-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 PhaeoP54_01853 431d27ecd0b649055cdf8be617ee4c0c 157 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 17 152 25.692 T 14-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 PhaeoP54_01853 431d27ecd0b649055cdf8be617ee4c0c 157 Gene3D G3DSA:3.30.420.140 17 156 2.3E-46 T 14-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 PhaeoP54_01853 431d27ecd0b649055cdf8be617ee4c0c 157 Pfam PF03652 Holliday junction resolvase 19 149 7.4E-43 T 14-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 PhaeoP54_01853 431d27ecd0b649055cdf8be617ee4c0c 157 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 21 149 4.3E-39 T 14-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 PhaeoP54_02112 ebfab4b9dc47db298f0121c088e5bce1 95 SUPERFAMILY SSF141000 2 93 1.57E-27 T 14-10-2018 IPR036113 Glu-tRNAGln amidotransferase superfamily, subunit C GO:0006450 PhaeoP54_02112 ebfab4b9dc47db298f0121c088e5bce1 95 TIGRFAM TIGR00135 gatC: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit 3 95 1.7E-26 T 14-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 PhaeoP54_02112 ebfab4b9dc47db298f0121c088e5bce1 95 Pfam PF02686 Glu-tRNAGln amidotransferase C subunit 20 90 1.8E-20 T 14-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 PhaeoP54_02112 ebfab4b9dc47db298f0121c088e5bce1 95 Gene3D G3DSA:1.10.20.60 1 93 9.4E-28 T 14-10-2018 PhaeoP54_02112 ebfab4b9dc47db298f0121c088e5bce1 95 Hamap MF_00122 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C [gatC]. 2 95 23.544 T 14-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 PhaeoP54_00371 d6c665f670509d521c75a666a478e170 187 SUPERFAMILY SSF110836 1 91 3.66E-32 T 14-10-2018 IPR036498 Scaffold protein Nfu/NifU, N-terminal domain superfamily PhaeoP54_00371 d6c665f670509d521c75a666a478e170 187 SMART SM00932 3 89 1.6E-51 T 14-10-2018 IPR014824 Scaffold protein Nfu/NifU, N-terminal PhaeoP54_00371 d6c665f670509d521c75a666a478e170 187 PIRSF PIRSF036773 1 186 1.0E-79 T 14-10-2018 IPR035433 NFU1-like PhaeoP54_00371 d6c665f670509d521c75a666a478e170 187 Gene3D G3DSA:3.30.300.130 111 185 5.2E-32 T 14-10-2018 IPR034904 Fe-S cluster assembly domain superfamily PhaeoP54_00371 d6c665f670509d521c75a666a478e170 187 Pfam PF01106 NifU-like domain 117 182 1.2E-29 T 14-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 PhaeoP54_00371 d6c665f670509d521c75a666a478e170 187 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 121 185 1.0E-32 T 14-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 PhaeoP54_00371 d6c665f670509d521c75a666a478e170 187 Pfam PF08712 Scaffold protein Nfu/NifU N terminal 3 89 5.3E-33 T 14-10-2018 IPR014824 Scaffold protein Nfu/NifU, N-terminal PhaeoP54_00371 d6c665f670509d521c75a666a478e170 187 SUPERFAMILY SSF117916 107 185 7.41E-28 T 14-10-2018 IPR034904 Fe-S cluster assembly domain superfamily PhaeoP54_00371 d6c665f670509d521c75a666a478e170 187 Gene3D G3DSA:3.30.1370.70 1 96 5.6E-38 T 14-10-2018 IPR036498 Scaffold protein Nfu/NifU, N-terminal domain superfamily PhaeoP54_02819 ffe9e0c1d9ad2fd8b87c9138cc741d65 308 Gene3D G3DSA:2.30.30.60 133 182 1.1E-16 T 14-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily PhaeoP54_02819 ffe9e0c1d9ad2fd8b87c9138cc741d65 308 Gene3D G3DSA:3.30.70.100 185 276 8.0E-23 T 14-10-2018 PhaeoP54_02819 ffe9e0c1d9ad2fd8b87c9138cc741d65 308 Pfam PF00924 Mechanosensitive ion channel 75 272 3.5E-49 T 14-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 PhaeoP54_02819 ffe9e0c1d9ad2fd8b87c9138cc741d65 308 SUPERFAMILY SSF50182 118 183 5.56E-18 T 14-10-2018 IPR010920 LSM domain superfamily PhaeoP54_02819 ffe9e0c1d9ad2fd8b87c9138cc741d65 308 SUPERFAMILY SSF82861 33 116 1.15E-16 T 14-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 PhaeoP54_02819 ffe9e0c1d9ad2fd8b87c9138cc741d65 308 SUPERFAMILY SSF82689 185 280 4.45E-28 T 14-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 PhaeoP54_02982 e12d9666e7fa81b1564068456fd7405b 295 Hamap MF_01850 tRNA-cytidine(32) 2-sulfurtransferase [ttcA]. 17 283 51.418 T 14-10-2018 IPR012089 tRNA-cytidine(32) 2-sulfurtransferase GO:0008033 PhaeoP54_02982 e12d9666e7fa81b1564068456fd7405b 295 Gene3D G3DSA:3.40.50.620 20 271 4.0E-43 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PhaeoP54_02982 e12d9666e7fa81b1564068456fd7405b 295 PIRSF PIRSF004976 12 286 9.5E-62 T 14-10-2018 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type GO:0008033 Reactome: R-HSA-6782315 PhaeoP54_02982 e12d9666e7fa81b1564068456fd7405b 295 Pfam PF01171 PP-loop family 54 215 3.1E-14 T 14-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 PhaeoP54_02982 e12d9666e7fa81b1564068456fd7405b 295 SUPERFAMILY SSF52402 49 268 1.5E-48 T 14-10-2018 PhaeoP54_02217 c0b6e89b3dcb9eadbf02ea9368fa18e4 764 Gene3D G3DSA:3.20.20.70 395 744 2.1E-113 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PhaeoP54_02217 c0b6e89b3dcb9eadbf02ea9368fa18e4 764 SUPERFAMILY SSF51905 1 342 4.1E-36 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PhaeoP54_02217 c0b6e89b3dcb9eadbf02ea9368fa18e4 764 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 397 726 1.0E-61 T 14-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 PhaeoP54_02217 c0b6e89b3dcb9eadbf02ea9368fa18e4 764 Gene3D G3DSA:3.50.50.60 3 339 2.0E-123 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PhaeoP54_02217 c0b6e89b3dcb9eadbf02ea9368fa18e4 764 SUPERFAMILY SSF51395 395 749 1.27E-110 T 14-10-2018 PhaeoP54_02217 c0b6e89b3dcb9eadbf02ea9368fa18e4 764 Gene3D G3DSA:3.30.9.20 40 255 2.0E-123 T 14-10-2018 PhaeoP54_02406 3fd921ea1141609b29ebc42accabe357 333 Pfam PF09898 Uncharacterized protein conserved in bacteria (DUF2125) 19 328 5.1E-77 T 14-10-2018 IPR018666 Protein of unknown function DUF2125 PhaeoP54_02969 4ccb93e605d389b8328d3813c03c7243 347 PIRSF PIRSF039012 1 324 3.6E-82 T 14-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 PhaeoP54_02969 4ccb93e605d389b8328d3813c03c7243 347 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 48 317 1.1E-51 T 14-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 PhaeoP54_02969 4ccb93e605d389b8328d3813c03c7243 347 Gene3D G3DSA:3.40.630.10 13 319 4.2E-85 T 14-10-2018 PhaeoP54_02969 4ccb93e605d389b8328d3813c03c7243 347 SUPERFAMILY SSF53187 20 317 2.98E-70 T 14-10-2018 PhaeoP54_03598 c78fca57744f41d6f968d2e4cad43393 255 SUPERFAMILY SSF52540 33 122 2.94E-5 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_00635 5ff8467ce0afd4fba9c59d83dfde8f6a 213 Gene3D G3DSA:1.10.150.450 22 89 2.2E-30 T 14-10-2018 PhaeoP54_00635 5ff8467ce0afd4fba9c59d83dfde8f6a 213 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 11 189 4.8E-10 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 PhaeoP54_00635 5ff8467ce0afd4fba9c59d83dfde8f6a 213 Pfam PF13419 Haloacid dehalogenase-like hydrolase 13 189 2.4E-8 T 14-10-2018 PhaeoP54_00635 5ff8467ce0afd4fba9c59d83dfde8f6a 213 SUPERFAMILY SSF56784 5 213 8.72E-30 T 14-10-2018 IPR036412 HAD-like superfamily PhaeoP54_00635 5ff8467ce0afd4fba9c59d83dfde8f6a 213 Gene3D G3DSA:3.40.50.1000 14 194 2.2E-30 T 14-10-2018 IPR023214 HAD superfamily PhaeoP54_00635 5ff8467ce0afd4fba9c59d83dfde8f6a 213 TIGRFAM TIGR01993 Pyr-5-nucltdase: pyrimidine 5'-nucleotidase 11 188 1.8E-58 T 14-10-2018 IPR010237 Pyrimidine 5-nucleotidase PhaeoP54_02573 bdfee3d313d0bb8055f13123694e88e9 378 Gene3D G3DSA:3.40.50.2300 45 346 1.4E-30 T 14-10-2018 PhaeoP54_02573 bdfee3d313d0bb8055f13123694e88e9 378 Gene3D G3DSA:3.40.50.2300 142 278 1.4E-30 T 14-10-2018 PhaeoP54_02573 bdfee3d313d0bb8055f13123694e88e9 378 SUPERFAMILY SSF53822 32 366 3.83E-46 T 14-10-2018 IPR028082 Periplasmic binding protein-like I PhaeoP54_02573 bdfee3d313d0bb8055f13123694e88e9 378 Pfam PF13458 Periplasmic binding protein 31 360 2.8E-38 T 14-10-2018 IPR028081 Leucine-binding protein domain PhaeoP54_02983 399a4fa3924df2f36030ecedfe2455ba 514 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 72 231 4.9E-17 T 14-10-2018 IPR000160 GGDEF domain PhaeoP54_02983 399a4fa3924df2f36030ecedfe2455ba 514 Gene3D G3DSA:3.20.20.450 245 499 1.3E-78 T 14-10-2018 IPR035919 EAL domain superfamily PhaeoP54_02983 399a4fa3924df2f36030ecedfe2455ba 514 SUPERFAMILY SSF55073 75 236 3.14E-27 T 14-10-2018 IPR029787 Nucleotide cyclase PhaeoP54_02983 399a4fa3924df2f36030ecedfe2455ba 514 SMART SM00052 244 491 1.4E-78 T 14-10-2018 IPR001633 EAL domain PhaeoP54_02983 399a4fa3924df2f36030ecedfe2455ba 514 Gene3D G3DSA:3.30.70.270 71 240 1.1E-29 T 14-10-2018 PhaeoP54_02983 399a4fa3924df2f36030ecedfe2455ba 514 SMART SM00267 61 234 1.1E-16 T 14-10-2018 IPR000160 GGDEF domain PhaeoP54_02983 399a4fa3924df2f36030ecedfe2455ba 514 Pfam PF00563 EAL domain 251 486 1.3E-61 T 14-10-2018 IPR001633 EAL domain PhaeoP54_02983 399a4fa3924df2f36030ecedfe2455ba 514 SUPERFAMILY SSF141868 250 498 1.7E-71 T 14-10-2018 IPR035919 EAL domain superfamily PhaeoP54_02983 399a4fa3924df2f36030ecedfe2455ba 514 Pfam PF00990 Diguanylate cyclase, GGDEF domain 72 227 7.0E-25 T 14-10-2018 IPR000160 GGDEF domain PhaeoP54_01946 da21c7412e9ca1144d206d9bad4edb17 407 Pfam PF13464 Domain of unknown function (DUF4115) 289 362 9.3E-17 T 14-10-2018 IPR025194 Domain of unknown function DUF4115 PhaeoP54_01946 da21c7412e9ca1144d206d9bad4edb17 407 Gene3D G3DSA:1.10.260.40 23 119 6.9E-17 T 14-10-2018 PhaeoP54_01946 da21c7412e9ca1144d206d9bad4edb17 407 Pfam PF13413 Helix-turn-helix domain 33 91 5.7E-15 T 14-10-2018 PhaeoP54_00917 c6e4efbcaa42fe625e0501808c59a855 356 SUPERFAMILY SSF52540 111 351 3.02E-55 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_00917 c6e4efbcaa42fe625e0501808c59a855 356 SUPERFAMILY SSF117916 1 84 3.11E-12 T 14-10-2018 IPR034904 Fe-S cluster assembly domain superfamily PhaeoP54_00917 c6e4efbcaa42fe625e0501808c59a855 356 Gene3D G3DSA:3.40.50.300 104 346 3.2E-80 T 14-10-2018 PhaeoP54_00917 c6e4efbcaa42fe625e0501808c59a855 356 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 110 349 3.2E-96 T 14-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 PhaeoP54_00917 c6e4efbcaa42fe625e0501808c59a855 356 Hamap MF_02040 Iron-sulfur cluster carrier protein. 103 351 36.395 T 14-10-2018 IPR019591 Mrp/NBP35 ATP-binding protein PhaeoP54_00917 c6e4efbcaa42fe625e0501808c59a855 356 ProSitePatterns PS01215 Mrp family signature. 216 232 - T 14-10-2018 IPR000808 Mrp, conserved site GO:0005524 PhaeoP54_00917 c6e4efbcaa42fe625e0501808c59a855 356 Pfam PF01883 Iron-sulfur cluster assembly protein 6 76 3.8E-16 T 14-10-2018 IPR002744 MIP18 family-like PhaeoP54_01777 483f1bdf6351e30ee4bd6adae0aca82e 206 SUPERFAMILY SSF50789 27 147 1.31E-8 T 14-10-2018 PhaeoP54_01777 483f1bdf6351e30ee4bd6adae0aca82e 206 Pfam PF04586 Caudovirus prohead serine protease 24 169 8.2E-28 T 14-10-2018 IPR006433 Prohead protease PhaeoP54_01777 483f1bdf6351e30ee4bd6adae0aca82e 206 TIGRFAM TIGR01543 proheadase_HK97: phage prohead protease, HK97 family 30 163 5.3E-28 T 14-10-2018 IPR006433 Prohead protease PhaeoP54_03394 fe5c46dc19092d0f0e040e75970005bb 899 Gene3D G3DSA:1.10.3060.10 616 825 1.3E-71 T 14-10-2018 PhaeoP54_03394 fe5c46dc19092d0f0e040e75970005bb 899 Gene3D G3DSA:3.40.50.300 407 614 8.0E-85 T 14-10-2018 PhaeoP54_03394 fe5c46dc19092d0f0e040e75970005bb 899 ProSitePatterns PS01312 SecA family signature. 490 505 - T 14-10-2018 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 PhaeoP54_03394 fe5c46dc19092d0f0e040e75970005bb 899 Pfam PF07516 SecA Wing and Scaffold domain 613 823 1.6E-64 T 14-10-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 PhaeoP54_03394 fe5c46dc19092d0f0e040e75970005bb 899 SUPERFAMILY SSF52540 406 613 6.47E-54 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_03394 fe5c46dc19092d0f0e040e75970005bb 899 PRINTS PR00906 SecA protein signature 119 129 1.3E-69 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 PhaeoP54_03394 fe5c46dc19092d0f0e040e75970005bb 899 PRINTS PR00906 SecA protein signature 366 383 1.3E-69 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 PhaeoP54_03394 fe5c46dc19092d0f0e040e75970005bb 899 PRINTS PR00906 SecA protein signature 103 117 1.3E-69 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 PhaeoP54_03394 fe5c46dc19092d0f0e040e75970005bb 899 PRINTS PR00906 SecA protein signature 172 192 1.3E-69 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 PhaeoP54_03394 fe5c46dc19092d0f0e040e75970005bb 899 PRINTS PR00906 SecA protein signature 65 89 1.3E-69 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 PhaeoP54_03394 fe5c46dc19092d0f0e040e75970005bb 899 PRINTS PR00906 SecA protein signature 329 351 1.3E-69 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 PhaeoP54_03394 fe5c46dc19092d0f0e040e75970005bb 899 PRINTS PR00906 SecA protein signature 403 416 1.3E-69 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 PhaeoP54_03394 fe5c46dc19092d0f0e040e75970005bb 899 Pfam PF07517 SecA DEAD-like domain 9 391 1.2E-126 T 14-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 PhaeoP54_03394 fe5c46dc19092d0f0e040e75970005bb 899 SUPERFAMILY SSF52540 9 405 2.28E-80 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_03394 fe5c46dc19092d0f0e040e75970005bb 899 SUPERFAMILY SSF81767 229 358 1.57E-43 T 14-10-2018 IPR036670 SecA, preprotein cross-linking domain superfamily GO:0016020|GO:0017038 PhaeoP54_03394 fe5c46dc19092d0f0e040e75970005bb 899 Hamap MF_01382 Protein translocase subunit SecA [secA]. 7 826 19.939 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 PhaeoP54_03394 fe5c46dc19092d0f0e040e75970005bb 899 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 30 811 0.0 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 PhaeoP54_03394 fe5c46dc19092d0f0e040e75970005bb 899 Gene3D G3DSA:3.90.1440.10 231 358 9.8E-173 T 14-10-2018 PhaeoP54_03394 fe5c46dc19092d0f0e040e75970005bb 899 SUPERFAMILY SSF81886 615 887 1.07E-78 T 14-10-2018 IPR036266 SecA, Wing/Scaffold superfamily PhaeoP54_03394 fe5c46dc19092d0f0e040e75970005bb 899 Pfam PF02810 SEC-C motif 879 896 4.8E-9 T 14-10-2018 IPR004027 SEC-C motif PhaeoP54_03394 fe5c46dc19092d0f0e040e75970005bb 899 SMART SM00957 8 392 1.8E-282 T 14-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 PhaeoP54_03394 fe5c46dc19092d0f0e040e75970005bb 899 SMART SM00958 230 348 1.2E-71 T 14-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 PhaeoP54_03394 fe5c46dc19092d0f0e040e75970005bb 899 Pfam PF01043 SecA preprotein cross-linking domain 234 348 1.1E-36 T 14-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 PhaeoP54_03394 fe5c46dc19092d0f0e040e75970005bb 899 Gene3D G3DSA:3.40.50.300 25 405 9.8E-173 T 14-10-2018 PhaeoP54_03879 0eb7cdf441a03f1a73f02a701eb0b659 140 Pfam PF02600 Disulfide bond formation protein DsbB 9 132 2.2E-11 T 14-10-2018 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 PhaeoP54_03879 0eb7cdf441a03f1a73f02a701eb0b659 140 SUPERFAMILY SSF158442 11 133 1.31E-24 T 14-10-2018 IPR023380 DsbB-like superfamily PhaeoP54_03879 0eb7cdf441a03f1a73f02a701eb0b659 140 Gene3D G3DSA:1.20.1550.10 3 103 2.8E-9 T 14-10-2018 IPR023380 DsbB-like superfamily PhaeoP54_03879 0eb7cdf441a03f1a73f02a701eb0b659 140 PIRSF PIRSF036659 1 140 4.3E-39 T 14-10-2018 IPR012187 Disulphide bond formation protein BdbC PhaeoP54_02980 c12b629112cc30fc4973b1430cb3a653 100 TIGRFAM TIGR00278 TIGR00278: putative membrane protein insertion efficiency factor 22 89 8.0E-25 T 14-10-2018 IPR002696 Putative membrane protein insertion efficiency factor PhaeoP54_02980 c12b629112cc30fc4973b1430cb3a653 100 ProDom PD004225 UPF0161 ALPHA-HEMOLYSIN YIDD UNCHARACTERIZED CYTOSOLIC PRECURSOR SIGNAL YTJA RNPA SIMILAR 28 81 1.0E-24 T 14-10-2018 IPR002696 Putative membrane protein insertion efficiency factor PhaeoP54_02980 c12b629112cc30fc4973b1430cb3a653 100 Pfam PF01809 Haemolytic domain 17 81 7.6E-27 T 14-10-2018 IPR002696 Putative membrane protein insertion efficiency factor PhaeoP54_02980 c12b629112cc30fc4973b1430cb3a653 100 Hamap MF_00386 Putative membrane protein insertion efficiency factor [yidD]. 14 82 22.064 T 14-10-2018 IPR002696 Putative membrane protein insertion efficiency factor PhaeoP54_02980 c12b629112cc30fc4973b1430cb3a653 100 SMART SM01234 14 81 6.7E-39 T 14-10-2018 IPR002696 Putative membrane protein insertion efficiency factor PhaeoP54_02158 1af40610e8250b5e222ea3b024eccaf2 111 TIGRFAM TIGR01563 gp16_SPP1: putative phage head-tail adaptor 28 95 8.7E-7 T 14-10-2018 IPR008767 Bacteriophage SPP1, head-tail adaptor PhaeoP54_02158 1af40610e8250b5e222ea3b024eccaf2 111 Gene3D G3DSA:2.40.10.270 1 106 1.6E-11 T 14-10-2018 IPR038666 Bacteriophage SPP1, head-tail adaptor superfamily PhaeoP54_02158 1af40610e8250b5e222ea3b024eccaf2 111 Pfam PF05521 Phage head-tail joining protein 7 102 9.2E-16 T 14-10-2018 IPR008767 Bacteriophage SPP1, head-tail adaptor PhaeoP54_00819 df4f82ea7a69eacfc292465ab6592667 167 ProSitePatterns PS00018 EF-hand calcium-binding domain. 68 80 - T 14-10-2018 IPR018247 EF-Hand 1, calcium-binding site PhaeoP54_00819 df4f82ea7a69eacfc292465ab6592667 167 ProSitePatterns PS00018 EF-hand calcium-binding domain. 126 138 - T 14-10-2018 IPR018247 EF-Hand 1, calcium-binding site PhaeoP54_00819 df4f82ea7a69eacfc292465ab6592667 167 SMART SM00054 35 63 5.1 T 14-10-2018 IPR002048 EF-hand domain GO:0005509 PhaeoP54_00819 df4f82ea7a69eacfc292465ab6592667 167 SMART SM00054 117 145 0.29 T 14-10-2018 IPR002048 EF-hand domain GO:0005509 PhaeoP54_00819 df4f82ea7a69eacfc292465ab6592667 167 SMART SM00054 64 87 22.0 T 14-10-2018 IPR002048 EF-hand domain GO:0005509 PhaeoP54_00819 df4f82ea7a69eacfc292465ab6592667 167 SUPERFAMILY SSF47473 38 143 1.46E-19 T 14-10-2018 IPR011992 EF-hand domain pair PhaeoP54_00819 df4f82ea7a69eacfc292465ab6592667 167 Gene3D G3DSA:1.10.238.10 88 146 1.8E-11 T 14-10-2018 PhaeoP54_00819 df4f82ea7a69eacfc292465ab6592667 167 Gene3D G3DSA:1.10.238.10 36 87 1.9E-11 T 14-10-2018 PhaeoP54_00819 df4f82ea7a69eacfc292465ab6592667 167 Pfam PF13202 EF hand 40 57 2.2E-4 T 14-10-2018 IPR002048 EF-hand domain GO:0005509 PhaeoP54_00819 df4f82ea7a69eacfc292465ab6592667 167 Pfam PF13202 EF hand 95 112 0.0025 T 14-10-2018 IPR002048 EF-hand domain GO:0005509 PhaeoP54_00819 df4f82ea7a69eacfc292465ab6592667 167 Pfam PF13202 EF hand 63 81 0.0013 T 14-10-2018 IPR002048 EF-hand domain GO:0005509 PhaeoP54_00819 df4f82ea7a69eacfc292465ab6592667 167 Pfam PF13202 EF hand 120 139 5.8E-6 T 14-10-2018 IPR002048 EF-hand domain GO:0005509 PhaeoP54_02522 410f1b38f2d81b0ef4a679cd7f6c01c5 173 Pfam PF13302 Acetyltransferase (GNAT) domain 14 150 7.9E-23 T 14-10-2018 IPR000182 GNAT domain PhaeoP54_02522 410f1b38f2d81b0ef4a679cd7f6c01c5 173 SUPERFAMILY SSF55729 6 166 1.01E-31 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase PhaeoP54_02522 410f1b38f2d81b0ef4a679cd7f6c01c5 173 Gene3D G3DSA:3.40.630.30 2 170 1.1E-36 T 14-10-2018 PhaeoP54_03604 da06d3b26cc7f0c1b0bde971a84cae66 386 Gene3D G3DSA:3.40.50.2300 33 367 1.7E-105 T 14-10-2018 PhaeoP54_03604 da06d3b26cc7f0c1b0bde971a84cae66 386 SUPERFAMILY SSF53822 30 380 1.94E-77 T 14-10-2018 IPR028082 Periplasmic binding protein-like I PhaeoP54_03604 da06d3b26cc7f0c1b0bde971a84cae66 386 Pfam PF13458 Periplasmic binding protein 31 372 3.0E-66 T 14-10-2018 IPR028081 Leucine-binding protein domain PhaeoP54_03604 da06d3b26cc7f0c1b0bde971a84cae66 386 Gene3D G3DSA:3.40.50.2300 150 370 1.7E-105 T 14-10-2018 PhaeoP54_03604 da06d3b26cc7f0c1b0bde971a84cae66 386 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 31 47 1.8E-11 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 PhaeoP54_03604 da06d3b26cc7f0c1b0bde971a84cae66 386 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 260 278 1.8E-11 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 PhaeoP54_03604 da06d3b26cc7f0c1b0bde971a84cae66 386 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 53 69 1.8E-11 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 PhaeoP54_03604 da06d3b26cc7f0c1b0bde971a84cae66 386 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 72 90 1.8E-11 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 PhaeoP54_02883 435bf98de74a3a0a5ac96e356c55b259 495 PIRSF PIRSF001549 10 473 6.1E-116 T 14-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 PhaeoP54_02883 435bf98de74a3a0a5ac96e356c55b259 495 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 14 460 1.3E-117 T 14-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 PhaeoP54_02883 435bf98de74a3a0a5ac96e356c55b259 495 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 10 489 25.87 T 14-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 PhaeoP54_02883 435bf98de74a3a0a5ac96e356c55b259 495 Pfam PF03129 Anticodon binding domain 384 488 1.6E-8 T 14-10-2018 IPR004154 Anticodon-binding PhaeoP54_02883 435bf98de74a3a0a5ac96e356c55b259 495 Pfam PF13393 Histidyl-tRNA synthetase 17 366 6.3E-39 T 14-10-2018 PhaeoP54_02883 435bf98de74a3a0a5ac96e356c55b259 495 Gene3D G3DSA:3.40.50.800 381 492 4.5E-20 T 14-10-2018 IPR036621 Anticodon-binding domain superfamily PhaeoP54_02883 435bf98de74a3a0a5ac96e356c55b259 495 Gene3D G3DSA:3.30.930.10 2 379 1.7E-101 T 14-10-2018 PhaeoP54_02883 435bf98de74a3a0a5ac96e356c55b259 495 SUPERFAMILY SSF52954 383 491 7.36E-17 T 14-10-2018 PhaeoP54_02883 435bf98de74a3a0a5ac96e356c55b259 495 SUPERFAMILY SSF55681 14 376 2.99E-68 T 14-10-2018 PhaeoP54_03844 e35ca953976a9110c4156ec09e3e1fc1 326 Pfam PF07751 Abi-like protein 34 236 2.2E-43 T 14-10-2018 IPR011664 Abortive infection system protein AbiD/AbiF-like PhaeoP54_01580 405aa6666ab11033897fe6cad37d4c4c 514 Gene3D G3DSA:3.40.50.300 3 93 2.4E-10 T 14-10-2018 PhaeoP54_01580 405aa6666ab11033897fe6cad37d4c4c 514 SUPERFAMILY SSF52540 20 376 4.99E-54 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_01580 405aa6666ab11033897fe6cad37d4c4c 514 Pfam PF05872 Bacterial protein of unknown function (DUF853) 14 510 2.9E-223 T 14-10-2018 IPR033186 Helicase HerA-like C-terminal PhaeoP54_01580 405aa6666ab11033897fe6cad37d4c4c 514 Gene3D G3DSA:3.40.50.300 212 384 2.0E-18 T 14-10-2018 PhaeoP54_03805 e4bee9ab9b19ecaf9c92edb52816318c 281 Gene3D G3DSA:3.40.50.300 31 280 2.8E-74 T 14-10-2018 PhaeoP54_03805 e4bee9ab9b19ecaf9c92edb52816318c 281 PIRSF PIRSF039085 32 281 3.0E-115 T 14-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 PhaeoP54_03805 e4bee9ab9b19ecaf9c92edb52816318c 281 SMART SM00382 60 261 2.5E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_03805 e4bee9ab9b19ecaf9c92edb52816318c 281 Pfam PF00005 ABC transporter 51 206 7.3E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PhaeoP54_03805 e4bee9ab9b19ecaf9c92edb52816318c 281 SUPERFAMILY SSF52540 36 276 2.54E-74 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_03805 e4bee9ab9b19ecaf9c92edb52816318c 281 ProSitePatterns PS00211 ABC transporters family signature. 178 192 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PhaeoP54_02389 5f1875571937764da6ced19b2a868759 285 Pfam PF12697 Alpha/beta hydrolase family 27 271 1.6E-18 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 PhaeoP54_02389 5f1875571937764da6ced19b2a868759 285 Gene3D G3DSA:3.40.50.1820 10 276 4.4E-39 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold PhaeoP54_02389 5f1875571937764da6ced19b2a868759 285 SUPERFAMILY SSF53474 14 277 1.54E-36 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold PhaeoP54_00778 e2c15a59d9a5239a25826cdaf923b29f 394 Gene3D G3DSA:3.40.1010.10 5 100 1.4E-11 T 14-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 PhaeoP54_00778 e2c15a59d9a5239a25826cdaf923b29f 394 TIGRFAM TIGR02467 CbiE: precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit 8 188 3.2E-32 T 14-10-2018 IPR012818 Cobalamin (vitamin B12) biosynthesis CbiE, precorrin-6Y methyltransferase GO:0008276|GO:0009236 PhaeoP54_00778 e2c15a59d9a5239a25826cdaf923b29f 394 Gene3D G3DSA:3.40.50.150 210 394 1.4E-64 T 14-10-2018 PhaeoP54_00778 e2c15a59d9a5239a25826cdaf923b29f 394 PIRSF PIRSF036428 1 394 1.2E-120 T 14-10-2018 IPR006365 Cobalamin (vitamin B12) biosynthesis CobL/Precorrin-6Y C(5,15)-methyltransferase GO:0008276|GO:0009236 KEGG: 00860+2.1.1.132 PhaeoP54_00778 e2c15a59d9a5239a25826cdaf923b29f 394 TIGRFAM TIGR02469 CbiT: precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit 225 345 3.7E-26 T 14-10-2018 IPR014008 Cobalamin biosynthesis, precorrin-6Y methyltransferase, CbiT subunit GO:0008276|GO:0009236 KEGG: 00860+2.1.1.196|MetaCyc: PWY-7377 PhaeoP54_00778 e2c15a59d9a5239a25826cdaf923b29f 394 SUPERFAMILY SSF53335 214 390 4.8E-25 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PhaeoP54_00778 e2c15a59d9a5239a25826cdaf923b29f 394 SUPERFAMILY SSF53790 5 202 3.79E-34 T 14-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 PhaeoP54_00778 e2c15a59d9a5239a25826cdaf923b29f 394 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 6 187 5.8E-14 T 14-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 PhaeoP54_01423 2056d1b8723b716d298ff018e06f3c9c 204 Pfam PF13489 Methyltransferase domain 48 174 1.7E-11 T 14-10-2018 PhaeoP54_01423 2056d1b8723b716d298ff018e06f3c9c 204 SUPERFAMILY SSF53335 1 161 6.43E-23 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PhaeoP54_01423 2056d1b8723b716d298ff018e06f3c9c 204 Gene3D G3DSA:3.40.50.150 9 172 6.2E-20 T 14-10-2018 PhaeoP54_00274 777380a07f2c32500c8131c8b4663a0c 436 Pfam PF01979 Amidohydrolase family 65 432 8.5E-14 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 PhaeoP54_00274 777380a07f2c32500c8131c8b4663a0c 436 Gene3D G3DSA:3.20.20.140 68 379 2.4E-111 T 14-10-2018 PhaeoP54_00274 777380a07f2c32500c8131c8b4663a0c 436 SUPERFAMILY SSF51338 1 435 2.02E-25 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 PhaeoP54_00274 777380a07f2c32500c8131c8b4663a0c 436 SUPERFAMILY SSF51556 67 376 4.3E-86 T 14-10-2018 IPR032466 Metal-dependent hydrolase PhaeoP54_00274 777380a07f2c32500c8131c8b4663a0c 436 Gene3D G3DSA:2.30.40.10 9 430 2.4E-111 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 PhaeoP54_00274 777380a07f2c32500c8131c8b4663a0c 436 TIGRFAM TIGR00857 pyrC_multi: dihydroorotase, multifunctional complex type 22 434 6.3E-93 T 14-10-2018 PhaeoP54_03558 77644e0aeee6d214c5df713284ffa3bc 142 Gene3D G3DSA:3.30.530.20 1 142 2.8E-39 T 14-10-2018 IPR023393 START-like domain superfamily PhaeoP54_03558 77644e0aeee6d214c5df713284ffa3bc 142 SUPERFAMILY SSF55961 3 139 5.04E-38 T 14-10-2018 PhaeoP54_03558 77644e0aeee6d214c5df713284ffa3bc 142 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 12 139 5.7E-25 T 14-10-2018 IPR013538 Activator of Hsp90 ATPase homologue 1-like PhaeoP54_03377 2fe6885c7a9e4fa4166bc6f9adc26713 228 SMART SM00345 24 82 0.0018 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PhaeoP54_03377 2fe6885c7a9e4fa4166bc6f9adc26713 228 SUPERFAMILY SSF48008 88 222 1.6E-25 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal PhaeoP54_03377 2fe6885c7a9e4fa4166bc6f9adc26713 228 SMART SM00895 92 215 1.9E-18 T 14-10-2018 IPR011711 GntR, C-terminal PhaeoP54_03377 2fe6885c7a9e4fa4166bc6f9adc26713 228 SUPERFAMILY SSF46785 14 108 1.99E-13 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_03377 2fe6885c7a9e4fa4166bc6f9adc26713 228 Gene3D G3DSA:1.10.10.10 17 83 2.4E-14 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_03377 2fe6885c7a9e4fa4166bc6f9adc26713 228 Pfam PF00392 Bacterial regulatory proteins, gntR family 22 81 5.0E-12 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PhaeoP54_03377 2fe6885c7a9e4fa4166bc6f9adc26713 228 Gene3D G3DSA:1.20.120.530 86 223 6.4E-26 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal PhaeoP54_03377 2fe6885c7a9e4fa4166bc6f9adc26713 228 Pfam PF07729 FCD domain 92 213 1.8E-22 T 14-10-2018 IPR011711 GntR, C-terminal PhaeoP54_00583 4ff9c21ca56c6bf2e4acdb59c7c0cf62 410 SUPERFAMILY SSF52540 157 401 2.8E-36 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_00583 4ff9c21ca56c6bf2e4acdb59c7c0cf62 410 Pfam PF13614 AAA domain 157 314 7.7E-10 T 14-10-2018 IPR025669 AAA domain PhaeoP54_00583 4ff9c21ca56c6bf2e4acdb59c7c0cf62 410 SUPERFAMILY SSF52172 62 141 9.05E-5 T 14-10-2018 IPR011006 CheY-like superfamily PhaeoP54_00583 4ff9c21ca56c6bf2e4acdb59c7c0cf62 410 Gene3D G3DSA:3.40.50.300 155 401 8.2E-45 T 14-10-2018 PhaeoP54_03735 44eba62ea78fc003a8a820760f52ddb3 264 SUPERFAMILY SSF52540 24 231 8.33E-36 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_03735 44eba62ea78fc003a8a820760f52ddb3 264 SMART SM00382 28 140 0.0017 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_03735 44eba62ea78fc003a8a820760f52ddb3 264 Pfam PF07728 AAA domain (dynein-related subfamily) 31 165 3.5E-39 T 14-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 PhaeoP54_03735 44eba62ea78fc003a8a820760f52ddb3 264 Gene3D G3DSA:3.40.50.300 16 183 5.1E-32 T 14-10-2018 PhaeoP54_03735 44eba62ea78fc003a8a820760f52ddb3 264 Pfam PF08406 CbbQ/NirQ/NorQ C-terminal 178 261 5.3E-30 T 14-10-2018 IPR013615 CbbQ/NirQ/NorQ, C-terminal PhaeoP54_01065 ff36a58fb6265c8ad1e094a3ffbd4223 346 TIGRFAM TIGR00856 pyrC_dimer: dihydroorotase, homodimeric type 5 345 1.2E-130 T 14-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 PhaeoP54_01065 ff36a58fb6265c8ad1e094a3ffbd4223 346 Hamap MF_00219 Dihydroorotase [pyrC]. 3 346 45.825 T 14-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 PhaeoP54_01065 ff36a58fb6265c8ad1e094a3ffbd4223 346 PIRSF PIRSF001237 1 346 2.9E-138 T 14-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 PhaeoP54_01065 ff36a58fb6265c8ad1e094a3ffbd4223 346 Pfam PF01979 Amidohydrolase family 12 321 2.2E-18 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 PhaeoP54_01065 ff36a58fb6265c8ad1e094a3ffbd4223 346 ProSitePatterns PS00482 Dihydroorotase signature 1. 12 20 - T 14-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 PhaeoP54_01065 ff36a58fb6265c8ad1e094a3ffbd4223 346 Gene3D G3DSA:3.20.20.140 3 346 1.6E-101 T 14-10-2018 PhaeoP54_01065 ff36a58fb6265c8ad1e094a3ffbd4223 346 SUPERFAMILY SSF51556 4 345 1.24E-140 T 14-10-2018 IPR032466 Metal-dependent hydrolase PhaeoP54_01065 ff36a58fb6265c8ad1e094a3ffbd4223 346 ProSitePatterns PS00483 Dihydroorotase signature 2. 246 257 - T 14-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 PhaeoP54_00338 b6fde4130c85e482d5d6efa526c249c9 284 Gene3D G3DSA:3.20.20.60 1 284 1.3E-86 T 14-10-2018 PhaeoP54_00338 b6fde4130c85e482d5d6efa526c249c9 284 SUPERFAMILY SSF51621 5 228 4.28E-65 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 PhaeoP54_00338 b6fde4130c85e482d5d6efa526c249c9 284 PIRSF PIRSF015582 2 284 1.2E-73 T 14-10-2018 IPR011206 Citrate lyase beta subunit-like PhaeoP54_00338 b6fde4130c85e482d5d6efa526c249c9 284 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 9 216 4.0E-41 T 14-10-2018 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 PhaeoP54_03352 d857549048c15803619d1f90a30c4ffa 299 Gene3D G3DSA:1.10.600.10 16 299 3.1E-95 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily PhaeoP54_03352 d857549048c15803619d1f90a30c4ffa 299 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 218 230 - T 14-10-2018 IPR033749 Polyprenyl synthetase, conserved site PhaeoP54_03352 d857549048c15803619d1f90a30c4ffa 299 Pfam PF00348 Polyprenyl synthetase 41 272 6.5E-54 T 14-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 PhaeoP54_03352 d857549048c15803619d1f90a30c4ffa 299 SUPERFAMILY SSF48576 34 287 9.25E-74 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily PhaeoP54_03352 d857549048c15803619d1f90a30c4ffa 299 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 90 106 - T 14-10-2018 IPR033749 Polyprenyl synthetase, conserved site PhaeoP54_01972 e80e323bd7d835e58e27089bf9b17583 419 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 76 407 7.6E-19 T 14-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 PhaeoP54_01972 e80e323bd7d835e58e27089bf9b17583 419 Gene3D G3DSA:3.20.20.190 70 415 3.6E-37 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 PhaeoP54_01972 e80e323bd7d835e58e27089bf9b17583 419 SUPERFAMILY SSF51695 74 414 5.23E-61 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 PhaeoP54_01136 df23496b2d5cc0b7faabd7e2d29c8c27 259 SMART SM00382 32 229 5.0E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_01136 df23496b2d5cc0b7faabd7e2d29c8c27 259 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PhaeoP54_01136 df23496b2d5cc0b7faabd7e2d29c8c27 259 Gene3D G3DSA:3.40.50.300 4 257 6.3E-71 T 14-10-2018 PhaeoP54_01136 df23496b2d5cc0b7faabd7e2d29c8c27 259 PIRSF PIRSF039085 4 257 2.3E-113 T 14-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 PhaeoP54_01136 df23496b2d5cc0b7faabd7e2d29c8c27 259 Pfam PF00005 ABC transporter 24 181 2.0E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PhaeoP54_01136 df23496b2d5cc0b7faabd7e2d29c8c27 259 SUPERFAMILY SSF52540 7 250 5.57E-71 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_03617 463242a54bd75993d0e2841226d1f181 222 SMART SM00895 84 208 1.5E-16 T 14-10-2018 IPR011711 GntR, C-terminal PhaeoP54_03617 463242a54bd75993d0e2841226d1f181 222 SUPERFAMILY SSF46785 7 78 1.95E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_03617 463242a54bd75993d0e2841226d1f181 222 SMART SM00345 16 74 7.2E-18 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PhaeoP54_03617 463242a54bd75993d0e2841226d1f181 222 Gene3D G3DSA:1.20.120.530 78 222 1.0E-26 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal PhaeoP54_03617 463242a54bd75993d0e2841226d1f181 222 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 34 48 9.5E-6 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PhaeoP54_03617 463242a54bd75993d0e2841226d1f181 222 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 48 64 9.5E-6 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PhaeoP54_03617 463242a54bd75993d0e2841226d1f181 222 Gene3D G3DSA:1.10.10.10 7 75 1.1E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_03617 463242a54bd75993d0e2841226d1f181 222 SUPERFAMILY SSF48008 80 215 3.14E-25 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal PhaeoP54_03617 463242a54bd75993d0e2841226d1f181 222 Pfam PF00392 Bacterial regulatory proteins, gntR family 15 74 1.5E-19 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PhaeoP54_03617 463242a54bd75993d0e2841226d1f181 222 Pfam PF07729 FCD domain 84 207 3.1E-23 T 14-10-2018 IPR011711 GntR, C-terminal PhaeoP54_00376 23d5669a9b80b5310931fbd0cbe499a9 157 Gene3D G3DSA:3.30.300.130 4 103 2.7E-25 T 14-10-2018 IPR034904 Fe-S cluster assembly domain superfamily PhaeoP54_00376 23d5669a9b80b5310931fbd0cbe499a9 157 TIGRFAM TIGR02159 PA_CoA_Oxy4: phenylacetate-CoA oxygenase, PaaJ subunit 20 157 7.9E-55 T 14-10-2018 IPR011883 Phenylacetate-CoA oxygenase, PaaJ subunit PhaeoP54_00376 23d5669a9b80b5310931fbd0cbe499a9 157 SUPERFAMILY SSF117916 9 102 4.9E-25 T 14-10-2018 IPR034904 Fe-S cluster assembly domain superfamily PhaeoP54_00376 23d5669a9b80b5310931fbd0cbe499a9 157 Pfam PF01883 Iron-sulfur cluster assembly protein 12 72 6.7E-14 T 14-10-2018 IPR002744 MIP18 family-like PhaeoP54_03832 a681d047674b4b3541bc0263ef834dfa 108 Pfam PF02694 Uncharacterised BCR, YnfA/UPF0060 family 1 107 1.3E-34 T 14-10-2018 IPR003844 Uncharacterised protein family UPF0060 GO:0016020 PhaeoP54_03832 a681d047674b4b3541bc0263ef834dfa 108 SUPERFAMILY SSF103481 7 106 2.75E-9 T 14-10-2018 PhaeoP54_03832 a681d047674b4b3541bc0263ef834dfa 108 Hamap MF_00010 UPF0060 membrane protein YnfA [ynfA]. 1 106 25.118 T 14-10-2018 IPR003844 Uncharacterised protein family UPF0060 GO:0016020 PhaeoP54_03120 9885ce17be51781aab4f8a62c8c96e54 297 SMART SM00345 56 115 1.2E-21 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PhaeoP54_03120 9885ce17be51781aab4f8a62c8c96e54 297 SMART SM00895 140 268 2.2E-19 T 14-10-2018 IPR011711 GntR, C-terminal PhaeoP54_03120 9885ce17be51781aab4f8a62c8c96e54 297 SUPERFAMILY SSF46785 47 119 1.14E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_03120 9885ce17be51781aab4f8a62c8c96e54 297 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 89 105 1.2E-10 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PhaeoP54_03120 9885ce17be51781aab4f8a62c8c96e54 297 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 75 89 1.2E-10 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PhaeoP54_03120 9885ce17be51781aab4f8a62c8c96e54 297 Pfam PF07729 FCD domain 142 267 8.2E-22 T 14-10-2018 IPR011711 GntR, C-terminal PhaeoP54_03120 9885ce17be51781aab4f8a62c8c96e54 297 SUPERFAMILY SSF48008 137 276 1.33E-26 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal PhaeoP54_03120 9885ce17be51781aab4f8a62c8c96e54 297 Gene3D G3DSA:1.10.10.10 40 115 9.0E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_03120 9885ce17be51781aab4f8a62c8c96e54 297 Gene3D G3DSA:1.20.120.530 139 277 1.0E-27 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal PhaeoP54_03120 9885ce17be51781aab4f8a62c8c96e54 297 Pfam PF00392 Bacterial regulatory proteins, gntR family 53 115 5.5E-20 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PhaeoP54_01354 155fcf0d1c1015d9db8cda6c52e23b77 87 Pfam PF00550 Phosphopantetheine attachment site 8 76 8.9E-5 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain PhaeoP54_01354 155fcf0d1c1015d9db8cda6c52e23b77 87 Gene3D G3DSA:1.10.1200.10 1 80 1.4E-11 T 14-10-2018 IPR036736 ACP-like superfamily PhaeoP54_01354 155fcf0d1c1015d9db8cda6c52e23b77 87 SUPERFAMILY SSF47336 2 83 7.59E-11 T 14-10-2018 IPR036736 ACP-like superfamily PhaeoP54_03200 f247984be34d21bafb2921ca958bb88c 269 Gene3D G3DSA:3.40.50.300 8 264 9.1E-63 T 14-10-2018 PhaeoP54_03200 f247984be34d21bafb2921ca958bb88c 269 SMART SM00382 42 243 1.5E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_03200 f247984be34d21bafb2921ca958bb88c 269 Pfam PF00005 ABC transporter 34 194 9.3E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PhaeoP54_03200 f247984be34d21bafb2921ca958bb88c 269 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 243 265 3.2E-10 T 14-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal PhaeoP54_03200 f247984be34d21bafb2921ca958bb88c 269 SUPERFAMILY SSF52540 17 265 2.88E-64 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_00707 eadcde23d7d300860486e26156a60f6a 263 Pfam PF01614 Bacterial transcriptional regulator 134 253 1.0E-30 T 14-10-2018 IPR014757 Transcription regulator IclR, C-terminal PhaeoP54_00707 eadcde23d7d300860486e26156a60f6a 263 SUPERFAMILY SSF55781 78 254 7.85E-45 T 14-10-2018 PhaeoP54_00707 eadcde23d7d300860486e26156a60f6a 263 SUPERFAMILY SSF46785 14 86 5.35E-15 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_00707 eadcde23d7d300860486e26156a60f6a 263 Pfam PF09339 IclR helix-turn-helix domain 15 64 8.3E-14 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 PhaeoP54_00707 eadcde23d7d300860486e26156a60f6a 263 Gene3D G3DSA:1.10.10.10 13 85 3.9E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_00707 eadcde23d7d300860486e26156a60f6a 263 Gene3D G3DSA:3.30.450.40 86 259 1.4E-49 T 14-10-2018 IPR029016 GAF-like domain superfamily PhaeoP54_00707 eadcde23d7d300860486e26156a60f6a 263 SMART SM00346 12 102 1.1E-11 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 PhaeoP54_02450 5e9c7df4497e1f127fd1b9b7029bf637 306 Pfam PF03466 LysR substrate binding domain 94 292 1.1E-34 T 14-10-2018 IPR005119 LysR, substrate-binding PhaeoP54_02450 5e9c7df4497e1f127fd1b9b7029bf637 306 SUPERFAMILY SSF46785 4 84 2.41E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_02450 5e9c7df4497e1f127fd1b9b7029bf637 306 Gene3D G3DSA:1.10.10.10 5 93 4.7E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_02450 5e9c7df4497e1f127fd1b9b7029bf637 306 Gene3D G3DSA:3.40.190.290 94 298 4.3E-33 T 14-10-2018 PhaeoP54_02450 5e9c7df4497e1f127fd1b9b7029bf637 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 5.3E-16 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PhaeoP54_02450 5e9c7df4497e1f127fd1b9b7029bf637 306 SUPERFAMILY SSF53850 94 298 1.15E-33 T 14-10-2018 PhaeoP54_01150 7f74b96ffd293a83eac85672f87d0f61 301 Gene3D G3DSA:3.40.190.10 164 269 1.5E-69 T 14-10-2018 PhaeoP54_01150 7f74b96ffd293a83eac85672f87d0f61 301 Gene3D G3DSA:3.40.190.10 92 291 1.5E-69 T 14-10-2018 PhaeoP54_01150 7f74b96ffd293a83eac85672f87d0f61 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 4.7E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PhaeoP54_01150 7f74b96ffd293a83eac85672f87d0f61 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 4.7E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PhaeoP54_01150 7f74b96ffd293a83eac85672f87d0f61 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 4.7E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PhaeoP54_01150 7f74b96ffd293a83eac85672f87d0f61 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 4.3E-18 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PhaeoP54_01150 7f74b96ffd293a83eac85672f87d0f61 301 Pfam PF03466 LysR substrate binding domain 89 292 9.3E-34 T 14-10-2018 IPR005119 LysR, substrate-binding PhaeoP54_01150 7f74b96ffd293a83eac85672f87d0f61 301 Gene3D G3DSA:1.10.10.10 2 91 1.7E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_01150 7f74b96ffd293a83eac85672f87d0f61 301 SUPERFAMILY SSF53850 90 298 5.27E-35 T 14-10-2018 PhaeoP54_01150 7f74b96ffd293a83eac85672f87d0f61 301 SUPERFAMILY SSF46785 2 112 9.7E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_00262 32f84eb9745b31703ead5222f1d1489f 81 Pfam PF02597 ThiS family 3 81 6.7E-15 T 14-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 PhaeoP54_00262 32f84eb9745b31703ead5222f1d1489f 81 SUPERFAMILY SSF54285 1 81 1.7E-17 T 14-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp PhaeoP54_00262 32f84eb9745b31703ead5222f1d1489f 81 TIGRFAM TIGR01682 moaD: molybdopterin converting factor, subunit 1 1 81 9.4E-22 T 14-10-2018 PhaeoP54_00262 32f84eb9745b31703ead5222f1d1489f 81 Gene3D G3DSA:3.10.20.30 1 81 5.5E-19 T 14-10-2018 IPR012675 Beta-grasp domain superfamily PhaeoP54_00983 4389b95c7a3b5dc77562b3cbf0bdb89e 669 Gene3D G3DSA:3.40.50.300 361 660 4.5E-83 T 14-10-2018 PhaeoP54_00983 4389b95c7a3b5dc77562b3cbf0bdb89e 669 Gene3D G3DSA:3.40.50.300 68 360 6.3E-82 T 14-10-2018 PhaeoP54_00983 4389b95c7a3b5dc77562b3cbf0bdb89e 669 SMART SM00382 400 592 1.0E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_00983 4389b95c7a3b5dc77562b3cbf0bdb89e 669 SMART SM00382 98 303 1.4E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_00983 4389b95c7a3b5dc77562b3cbf0bdb89e 669 SUPERFAMILY SSF52540 71 325 4.14E-65 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_00983 4389b95c7a3b5dc77562b3cbf0bdb89e 669 Pfam PF00005 ABC transporter 392 542 1.6E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PhaeoP54_00983 4389b95c7a3b5dc77562b3cbf0bdb89e 669 ProSitePatterns PS00211 ABC transporters family signature. 226 240 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PhaeoP54_00983 4389b95c7a3b5dc77562b3cbf0bdb89e 669 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 305 336 8.5E-6 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 PhaeoP54_00983 4389b95c7a3b5dc77562b3cbf0bdb89e 669 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 594 629 4.5E-8 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 PhaeoP54_00983 4389b95c7a3b5dc77562b3cbf0bdb89e 669 Pfam PF00005 ABC transporter 89 253 2.7E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PhaeoP54_00983 4389b95c7a3b5dc77562b3cbf0bdb89e 669 SUPERFAMILY SSF52540 364 614 3.77E-71 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_00983 4389b95c7a3b5dc77562b3cbf0bdb89e 669 ProSitePatterns PS00211 ABC transporters family signature. 515 529 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PhaeoP54_00883 c6e0204dfd8e4fa835d7b21a5a3f18a7 234 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 5 153 7.7E-34 T 14-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 PhaeoP54_00883 c6e0204dfd8e4fa835d7b21a5a3f18a7 234 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 1 186 24.506 T 14-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 PhaeoP54_00883 c6e0204dfd8e4fa835d7b21a5a3f18a7 234 SUPERFAMILY SSF52540 1 190 2.76E-37 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_00883 c6e0204dfd8e4fa835d7b21a5a3f18a7 234 Pfam PF13500 AAA domain 3 187 1.4E-48 T 14-10-2018 PhaeoP54_00883 c6e0204dfd8e4fa835d7b21a5a3f18a7 234 PIRSF PIRSF006755 1 196 1.0E-44 T 14-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 PhaeoP54_00883 c6e0204dfd8e4fa835d7b21a5a3f18a7 234 Gene3D G3DSA:3.40.50.300 3 193 2.9E-44 T 14-10-2018 PhaeoP54_03016 38da2bfe4ccf516833528399bcef14a0 177 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 176 3.8E-74 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 PhaeoP54_03016 38da2bfe4ccf516833528399bcef14a0 177 Pfam PF00347 Ribosomal protein L6 91 164 4.6E-20 T 14-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PhaeoP54_03016 38da2bfe4ccf516833528399bcef14a0 177 Pfam PF00347 Ribosomal protein L6 12 82 1.1E-14 T 14-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PhaeoP54_03016 38da2bfe4ccf516833528399bcef14a0 177 PIRSF PIRSF002162 1 177 3.6E-45 T 14-10-2018 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PhaeoP54_03016 38da2bfe4ccf516833528399bcef14a0 177 Gene3D G3DSA:3.90.930.12 1 82 1.1E-26 T 14-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PhaeoP54_03016 38da2bfe4ccf516833528399bcef14a0 177 PRINTS PR00059 Ribosomal protein L6 signature 99 115 1.4E-32 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 PhaeoP54_03016 38da2bfe4ccf516833528399bcef14a0 177 PRINTS PR00059 Ribosomal protein L6 signature 71 96 1.4E-32 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 PhaeoP54_03016 38da2bfe4ccf516833528399bcef14a0 177 PRINTS PR00059 Ribosomal protein L6 signature 141 162 1.4E-32 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 PhaeoP54_03016 38da2bfe4ccf516833528399bcef14a0 177 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 154 162 - T 14-10-2018 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 PhaeoP54_03016 38da2bfe4ccf516833528399bcef14a0 177 Gene3D G3DSA:3.90.930.12 83 177 3.1E-40 T 14-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PhaeoP54_03016 38da2bfe4ccf516833528399bcef14a0 177 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 176 37.088 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 PhaeoP54_03016 38da2bfe4ccf516833528399bcef14a0 177 SUPERFAMILY SSF56053 1 82 1.34E-22 T 14-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PhaeoP54_03016 38da2bfe4ccf516833528399bcef14a0 177 SUPERFAMILY SSF56053 83 177 6.91E-37 T 14-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PhaeoP54_00394 6f19da4e05857792496fd9c2aa521203 244 Pfam PF07702 UTRA domain 91 229 2.3E-28 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 PhaeoP54_00394 6f19da4e05857792496fd9c2aa521203 244 Gene3D G3DSA:1.10.10.10 1 76 6.2E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_00394 6f19da4e05857792496fd9c2aa521203 244 Pfam PF00392 Bacterial regulatory proteins, gntR family 9 69 1.5E-19 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PhaeoP54_00394 6f19da4e05857792496fd9c2aa521203 244 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 29 43 2.8E-8 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PhaeoP54_00394 6f19da4e05857792496fd9c2aa521203 244 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 43 59 2.8E-8 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PhaeoP54_00394 6f19da4e05857792496fd9c2aa521203 244 TIGRFAM TIGR02325 C_P_lyase_phnF: phosphonate metabolism transcriptional regulator PhnF 4 233 1.5E-67 T 14-10-2018 IPR012702 Phosphonate C-P lyase system, transcriptional regulator PhnF PhaeoP54_00394 6f19da4e05857792496fd9c2aa521203 244 Gene3D G3DSA:3.40.1410.10 80 236 3.7E-37 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily PhaeoP54_00394 6f19da4e05857792496fd9c2aa521203 244 SUPERFAMILY SSF46785 4 81 1.41E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_00394 6f19da4e05857792496fd9c2aa521203 244 SUPERFAMILY SSF64288 57 233 7.22E-42 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily PhaeoP54_00394 6f19da4e05857792496fd9c2aa521203 244 SMART SM00345 10 69 2.2E-20 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PhaeoP54_00394 6f19da4e05857792496fd9c2aa521203 244 SMART SM00866 90 230 1.7E-29 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 PhaeoP54_03591 7dcf2983c5291b02743a07d7306cd6a8 434 Gene3D G3DSA:3.40.50.300 110 426 1.0E-56 T 14-10-2018 PhaeoP54_03591 7dcf2983c5291b02743a07d7306cd6a8 434 SUPERFAMILY SSF52540 104 395 8.22E-37 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_03591 7dcf2983c5291b02743a07d7306cd6a8 434 Pfam PF13614 AAA domain 110 317 7.5E-26 T 14-10-2018 IPR025669 AAA domain PhaeoP54_00572 dd47962ce7ce5fb5a365315fb2acb3c5 300 ProSitePatterns PS00766 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 1. 76 101 - T 14-10-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 PhaeoP54_00572 dd47962ce7ce5fb5a365315fb2acb3c5 300 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 267 275 - T 14-10-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 PhaeoP54_00572 dd47962ce7ce5fb5a365315fb2acb3c5 300 Hamap MF_01576 Bifunctional protein FolD [folD]. 3 290 38.17 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 PhaeoP54_00572 dd47962ce7ce5fb5a365315fb2acb3c5 300 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 5 121 3.6E-40 T 14-10-2018 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 PhaeoP54_00572 dd47962ce7ce5fb5a365315fb2acb3c5 300 SUPERFAMILY SSF53223 1 122 3.26E-41 T 14-10-2018 PhaeoP54_00572 dd47962ce7ce5fb5a365315fb2acb3c5 300 Gene3D G3DSA:3.40.50.10860 8 283 1.3E-107 T 14-10-2018 PhaeoP54_00572 dd47962ce7ce5fb5a365315fb2acb3c5 300 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 110 131 2.6E-82 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 PhaeoP54_00572 dd47962ce7ce5fb5a365315fb2acb3c5 300 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 204 233 2.6E-82 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 PhaeoP54_00572 dd47962ce7ce5fb5a365315fb2acb3c5 300 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 75 102 2.6E-82 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 PhaeoP54_00572 dd47962ce7ce5fb5a365315fb2acb3c5 300 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 155 175 2.6E-82 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 PhaeoP54_00572 dd47962ce7ce5fb5a365315fb2acb3c5 300 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 246 262 2.6E-82 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 PhaeoP54_00572 dd47962ce7ce5fb5a365315fb2acb3c5 300 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 34 56 2.6E-82 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 PhaeoP54_00572 dd47962ce7ce5fb5a365315fb2acb3c5 300 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 263 281 2.6E-82 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 PhaeoP54_00572 dd47962ce7ce5fb5a365315fb2acb3c5 300 SUPERFAMILY SSF51735 123 287 1.4E-50 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PhaeoP54_00572 dd47962ce7ce5fb5a365315fb2acb3c5 300 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 125 288 4.6E-66 T 14-10-2018 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0004488 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 PhaeoP54_00572 dd47962ce7ce5fb5a365315fb2acb3c5 300 Gene3D G3DSA:3.40.50.720 6 266 1.3E-107 T 14-10-2018 PhaeoP54_02955 97f95ba4df2f4893f20fae2b01ca025f 96 Gene3D G3DSA:3.30.70.100 1 93 3.0E-23 T 14-10-2018 PhaeoP54_02955 97f95ba4df2f4893f20fae2b01ca025f 96 Pfam PF03992 Antibiotic biosynthesis monooxygenase 3 66 7.4E-7 T 14-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain PhaeoP54_02955 97f95ba4df2f4893f20fae2b01ca025f 96 SUPERFAMILY SSF54909 1 93 6.19E-13 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel PhaeoP54_01722 ff0ad72438e54b590b5f535911bde2fe 144 Gene3D G3DSA:3.10.580.10 1 143 2.5E-41 T 14-10-2018 PhaeoP54_01722 ff0ad72438e54b590b5f535911bde2fe 144 SUPERFAMILY SSF54631 12 142 2.27E-32 T 14-10-2018 PhaeoP54_01722 ff0ad72438e54b590b5f535911bde2fe 144 SMART SM00116 80 127 1.8E-9 T 14-10-2018 IPR000644 CBS domain PhaeoP54_01722 ff0ad72438e54b590b5f535911bde2fe 144 SMART SM00116 14 62 0.004 T 14-10-2018 IPR000644 CBS domain PhaeoP54_01722 ff0ad72438e54b590b5f535911bde2fe 144 Pfam PF00571 CBS domain 74 126 5.5E-15 T 14-10-2018 IPR000644 CBS domain PhaeoP54_01722 ff0ad72438e54b590b5f535911bde2fe 144 Pfam PF00571 CBS domain 13 62 1.2E-9 T 14-10-2018 IPR000644 CBS domain PhaeoP54_00963 e20bd95cd17ed68a919eabf687624a74 746 SMART SM01008 237 315 3.1E-22 T 14-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead PhaeoP54_00963 e20bd95cd17ed68a919eabf687624a74 746 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 607 693 1.2E-10 T 14-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PhaeoP54_00963 e20bd95cd17ed68a919eabf687624a74 746 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 336 572 1.5E-32 T 14-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PhaeoP54_00963 e20bd95cd17ed68a919eabf687624a74 746 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 48 206 3.3E-8 T 14-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PhaeoP54_00963 e20bd95cd17ed68a919eabf687624a74 746 Gene3D G3DSA:3.90.1170.50 209 289 2.4E-12 T 14-10-2018 PhaeoP54_00963 e20bd95cd17ed68a919eabf687624a74 746 Gene3D G3DSA:3.30.365.10 50 110 3.1E-6 T 14-10-2018 PhaeoP54_00963 e20bd95cd17ed68a919eabf687624a74 746 Gene3D G3DSA:3.30.365.10 132 208 9.3E-7 T 14-10-2018 PhaeoP54_00963 e20bd95cd17ed68a919eabf687624a74 746 SUPERFAMILY SSF54665 238 315 6.8E-14 T 14-10-2018 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily PhaeoP54_00963 e20bd95cd17ed68a919eabf687624a74 746 Gene3D G3DSA:3.30.365.10 347 571 4.7E-57 T 14-10-2018 PhaeoP54_00963 e20bd95cd17ed68a919eabf687624a74 746 PIRSF PIRSF036389 1 744 1.7E-225 T 14-10-2018 IPR012368 Oxidoreductase molybdopterin-binding subunit, IorB-related PhaeoP54_00963 e20bd95cd17ed68a919eabf687624a74 746 Gene3D G3DSA:3.30.365.10 366 458 4.7E-57 T 14-10-2018 PhaeoP54_00963 e20bd95cd17ed68a919eabf687624a74 746 SUPERFAMILY SSF56003 340 740 1.2E-103 T 14-10-2018 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GO:0016491|GO:0055114 PhaeoP54_00963 e20bd95cd17ed68a919eabf687624a74 746 SUPERFAMILY SSF56003 17 262 3.82E-34 T 14-10-2018 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GO:0016491|GO:0055114 PhaeoP54_00963 e20bd95cd17ed68a919eabf687624a74 746 Gene3D G3DSA:3.30.365.10 586 742 2.4E-32 T 14-10-2018 PhaeoP54_01678 b04b0e1a3a8f77489acb753f8b10e318 227 Pfam PF01726 LexA DNA binding domain 2 63 1.5E-14 T 14-10-2018 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 PhaeoP54_01678 b04b0e1a3a8f77489acb753f8b10e318 227 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 140 150 1.1E-8 T 14-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 PhaeoP54_01678 b04b0e1a3a8f77489acb753f8b10e318 227 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 151 162 1.1E-8 T 14-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 PhaeoP54_01678 b04b0e1a3a8f77489acb753f8b10e318 227 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 180 192 1.1E-8 T 14-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 PhaeoP54_01678 b04b0e1a3a8f77489acb753f8b10e318 227 SUPERFAMILY SSF46785 2 68 3.93E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_01678 b04b0e1a3a8f77489acb753f8b10e318 227 SUPERFAMILY SSF51306 103 225 5.23E-32 T 14-10-2018 IPR036286 LexA/Signal peptidase-like superfamily PhaeoP54_01678 b04b0e1a3a8f77489acb753f8b10e318 227 Pfam PF00717 Peptidase S24-like 143 209 9.1E-15 T 14-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C PhaeoP54_01678 b04b0e1a3a8f77489acb753f8b10e318 227 Gene3D G3DSA:2.10.109.10 108 226 5.8E-40 T 14-10-2018 PhaeoP54_01678 b04b0e1a3a8f77489acb753f8b10e318 227 Hamap MF_00015 LexA repressor [lexA]. 1 227 33.709 T 14-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 PhaeoP54_01678 b04b0e1a3a8f77489acb753f8b10e318 227 Gene3D G3DSA:1.10.10.10 1 68 4.5E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_01678 b04b0e1a3a8f77489acb753f8b10e318 227 TIGRFAM TIGR00498 lexA: repressor LexA 2 226 3.9E-55 T 14-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 PhaeoP54_03749 e2390add4f6121176e70ad12ff6f5676 320 Pfam PF00970 Oxidoreductase FAD-binding domain 12 104 3.4E-7 T 14-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 PhaeoP54_03749 e2390add4f6121176e70ad12ff6f5676 320 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 269 277 - T 14-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 PhaeoP54_03749 e2390add4f6121176e70ad12ff6f5676 320 SUPERFAMILY SSF63380 6 102 4.48E-21 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel PhaeoP54_03749 e2390add4f6121176e70ad12ff6f5676 320 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 238 311 1.6E-11 T 14-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 PhaeoP54_03749 e2390add4f6121176e70ad12ff6f5676 320 Gene3D G3DSA:3.40.50.80 104 221 1.7E-22 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain PhaeoP54_03749 e2390add4f6121176e70ad12ff6f5676 320 SUPERFAMILY SSF54292 214 318 6.29E-24 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 PhaeoP54_03749 e2390add4f6121176e70ad12ff6f5676 320 Gene3D G3DSA:2.40.30.10 3 103 1.5E-18 T 14-10-2018 PhaeoP54_03749 e2390add4f6121176e70ad12ff6f5676 320 SUPERFAMILY SSF52343 100 224 8.25E-24 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain PhaeoP54_03749 e2390add4f6121176e70ad12ff6f5676 320 Gene3D G3DSA:3.10.20.30 224 320 3.7E-23 T 14-10-2018 IPR012675 Beta-grasp domain superfamily PhaeoP54_03749 e2390add4f6121176e70ad12ff6f5676 320 PRINTS PR00409 Phthalate dioxygenase reductase family signature 139 148 7.6E-23 T 14-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 PhaeoP54_03749 e2390add4f6121176e70ad12ff6f5676 320 PRINTS PR00409 Phthalate dioxygenase reductase family signature 92 106 7.6E-23 T 14-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 PhaeoP54_03749 e2390add4f6121176e70ad12ff6f5676 320 PRINTS PR00409 Phthalate dioxygenase reductase family signature 114 133 7.6E-23 T 14-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 PhaeoP54_03749 e2390add4f6121176e70ad12ff6f5676 320 PRINTS PR00409 Phthalate dioxygenase reductase family signature 55 69 7.6E-23 T 14-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 PhaeoP54_03749 e2390add4f6121176e70ad12ff6f5676 320 PRINTS PR00409 Phthalate dioxygenase reductase family signature 191 199 7.6E-23 T 14-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 PhaeoP54_03749 e2390add4f6121176e70ad12ff6f5676 320 PRINTS PR00409 Phthalate dioxygenase reductase family signature 43 55 7.6E-23 T 14-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 PhaeoP54_00222 832b68b18d39d14e5f47c19deaeea043 838 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 276 779 7.5E-84 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 PhaeoP54_00222 832b68b18d39d14e5f47c19deaeea043 838 Gene3D G3DSA:3.30.70.100 74 143 1.2E-20 T 14-10-2018 PhaeoP54_00222 832b68b18d39d14e5f47c19deaeea043 838 Gene3D G3DSA:3.30.70.100 7 73 4.3E-15 T 14-10-2018 PhaeoP54_00222 832b68b18d39d14e5f47c19deaeea043 838 SUPERFAMILY SSF55008 4 72 5.24E-15 T 14-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 PhaeoP54_00222 832b68b18d39d14e5f47c19deaeea043 838 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 219 812 2.8E-171 T 14-10-2018 PhaeoP54_00222 832b68b18d39d14e5f47c19deaeea043 838 ProSitePatterns PS01047 Heavy-metal-associated domain. 80 109 - T 14-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 PhaeoP54_00222 832b68b18d39d14e5f47c19deaeea043 838 Gene3D G3DSA:3.40.1110.10 517 634 1.2E-82 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 PhaeoP54_00222 832b68b18d39d14e5f47c19deaeea043 838 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 237 811 3.6E-179 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 PhaeoP54_00222 832b68b18d39d14e5f47c19deaeea043 838 Pfam PF00403 Heavy-metal-associated domain 12 69 1.7E-10 T 14-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 PhaeoP54_00222 832b68b18d39d14e5f47c19deaeea043 838 Pfam PF00403 Heavy-metal-associated domain 78 137 4.1E-13 T 14-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 PhaeoP54_00222 832b68b18d39d14e5f47c19deaeea043 838 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 76 138 4.9E-10 T 14-10-2018 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 Reactome: R-HSA-936837 PhaeoP54_00222 832b68b18d39d14e5f47c19deaeea043 838 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 702 721 6.2E-30 T 14-10-2018 PhaeoP54_00222 832b68b18d39d14e5f47c19deaeea043 838 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 354 368 6.2E-30 T 14-10-2018 PhaeoP54_00222 832b68b18d39d14e5f47c19deaeea043 838 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 627 638 6.2E-30 T 14-10-2018 PhaeoP54_00222 832b68b18d39d14e5f47c19deaeea043 838 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 725 737 6.2E-30 T 14-10-2018 PhaeoP54_00222 832b68b18d39d14e5f47c19deaeea043 838 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 506 520 6.2E-30 T 14-10-2018 PhaeoP54_00222 832b68b18d39d14e5f47c19deaeea043 838 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 649 659 6.2E-30 T 14-10-2018 PhaeoP54_00222 832b68b18d39d14e5f47c19deaeea043 838 SUPERFAMILY SSF56784 504 809 8.71E-60 T 14-10-2018 IPR036412 HAD-like superfamily PhaeoP54_00222 832b68b18d39d14e5f47c19deaeea043 838 SUPERFAMILY SSF81665 261 790 2.62E-13 T 14-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 PhaeoP54_00222 832b68b18d39d14e5f47c19deaeea043 838 PRINTS PR00943 Copper-transporting ATPase signature 274 293 7.5E-12 T 14-10-2018 PhaeoP54_00222 832b68b18d39d14e5f47c19deaeea043 838 PRINTS PR00943 Copper-transporting ATPase signature 736 750 7.5E-12 T 14-10-2018 PhaeoP54_00222 832b68b18d39d14e5f47c19deaeea043 838 PRINTS PR00943 Copper-transporting ATPase signature 222 241 7.5E-12 T 14-10-2018 PhaeoP54_00222 832b68b18d39d14e5f47c19deaeea043 838 PRINTS PR00943 Copper-transporting ATPase signature 427 441 7.5E-12 T 14-10-2018 PhaeoP54_00222 832b68b18d39d14e5f47c19deaeea043 838 PRINTS PR00943 Copper-transporting ATPase signature 294 312 7.5E-12 T 14-10-2018 PhaeoP54_00222 832b68b18d39d14e5f47c19deaeea043 838 PRINTS PR00943 Copper-transporting ATPase signature 679 696 7.5E-12 T 14-10-2018 PhaeoP54_00222 832b68b18d39d14e5f47c19deaeea043 838 SUPERFAMILY SSF81653 307 404 3.53E-25 T 14-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 PhaeoP54_00222 832b68b18d39d14e5f47c19deaeea043 838 SUPERFAMILY SSF55008 74 143 2.88E-20 T 14-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 PhaeoP54_00222 832b68b18d39d14e5f47c19deaeea043 838 Pfam PF00122 E1-E2 ATPase 305 485 4.0E-51 T 14-10-2018 PhaeoP54_00222 832b68b18d39d14e5f47c19deaeea043 838 Gene3D G3DSA:3.40.50.1000 487 754 1.2E-82 T 14-10-2018 IPR023214 HAD superfamily PhaeoP54_00222 832b68b18d39d14e5f47c19deaeea043 838 Gene3D G3DSA:2.70.150.20 293 408 1.7E-36 T 14-10-2018 PhaeoP54_00222 832b68b18d39d14e5f47c19deaeea043 838 Pfam PF00702 haloacid dehalogenase-like hydrolase 503 716 2.6E-36 T 14-10-2018 PhaeoP54_00222 832b68b18d39d14e5f47c19deaeea043 838 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 508 514 - T 14-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 PhaeoP54_02627 2f9d99775296720b3eccc0b58628f423 223 Gene3D G3DSA:3.40.50.2300 3 145 2.5E-20 T 14-10-2018 PhaeoP54_02627 2f9d99775296720b3eccc0b58628f423 223 SMART SM00448 13 129 1.3E-12 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PhaeoP54_02627 2f9d99775296720b3eccc0b58628f423 223 Pfam PF00072 Response regulator receiver domain 15 119 4.8E-14 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PhaeoP54_02627 2f9d99775296720b3eccc0b58628f423 223 SUPERFAMILY SSF52172 12 140 2.28E-21 T 14-10-2018 IPR011006 CheY-like superfamily PhaeoP54_00412 94a5cd7e067b8c0d81244823989fa03e 780 Gene3D G3DSA:3.30.70.100 643 730 3.1E-19 T 14-10-2018 PhaeoP54_00412 94a5cd7e067b8c0d81244823989fa03e 780 Gene3D G3DSA:2.30.30.60 590 639 4.6E-15 T 14-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily PhaeoP54_00412 94a5cd7e067b8c0d81244823989fa03e 780 SUPERFAMILY SSF50182 575 638 6.87E-10 T 14-10-2018 IPR010920 LSM domain superfamily PhaeoP54_00412 94a5cd7e067b8c0d81244823989fa03e 780 SUPERFAMILY SSF82861 477 573 7.19E-9 T 14-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 PhaeoP54_00412 94a5cd7e067b8c0d81244823989fa03e 780 Pfam PF00924 Mechanosensitive ion channel 533 732 1.2E-42 T 14-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 PhaeoP54_00412 94a5cd7e067b8c0d81244823989fa03e 780 SUPERFAMILY SSF82689 638 741 2.88E-16 T 14-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 PhaeoP54_02489 60da241815d98e33e612be564d884dd2 350 Gene3D G3DSA:2.40.30.10 100 231 8.9E-26 T 14-10-2018 PhaeoP54_02489 60da241815d98e33e612be564d884dd2 350 Pfam PF04954 Siderophore-interacting protein 237 349 1.2E-19 T 14-10-2018 IPR007037 Siderophore-interacting protein, C-terminal domain PhaeoP54_02489 60da241815d98e33e612be564d884dd2 350 SUPERFAMILY SSF63380 142 233 5.91E-10 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel PhaeoP54_02489 60da241815d98e33e612be564d884dd2 350 Gene3D G3DSA:3.40.50.80 233 350 1.7E-24 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain PhaeoP54_02489 60da241815d98e33e612be564d884dd2 350 Pfam PF08021 Siderophore-interacting FAD-binding domain 119 230 8.2E-20 T 14-10-2018 IPR013113 FAD-binding 9, siderophore-interacting PhaeoP54_00567 89b982cc70c321f942e99e9cfe4c6281 386 SUPERFAMILY SSF52402 1 179 1.95E-43 T 14-10-2018 PhaeoP54_00567 89b982cc70c321f942e99e9cfe4c6281 386 Pfam PF01171 PP-loop family 1 171 3.5E-46 T 14-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 PhaeoP54_00567 89b982cc70c321f942e99e9cfe4c6281 386 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 1 172 2.5E-45 T 14-10-2018 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 PhaeoP54_00567 89b982cc70c321f942e99e9cfe4c6281 386 Gene3D G3DSA:3.40.50.620 1 202 1.6E-54 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PhaeoP54_00567 89b982cc70c321f942e99e9cfe4c6281 386 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 3 279 15.121 T 14-10-2018 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 PhaeoP54_00671 55d69a7159793e9b268ab50647055251 175 Pfam PF13302 Acetyltransferase (GNAT) domain 10 153 6.8E-30 T 14-10-2018 IPR000182 GNAT domain PhaeoP54_00671 55d69a7159793e9b268ab50647055251 175 Gene3D G3DSA:3.40.630.30 2 173 1.3E-49 T 14-10-2018 PhaeoP54_00671 55d69a7159793e9b268ab50647055251 175 SUPERFAMILY SSF55729 4 155 8.02E-38 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase PhaeoP54_02431 6bbdad9fb3a0ad2815b6075629f0962b 151 Pfam PF01047 MarR family 36 94 6.6E-17 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PhaeoP54_02431 6bbdad9fb3a0ad2815b6075629f0962b 151 SUPERFAMILY SSF46785 9 142 1.89E-31 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_02431 6bbdad9fb3a0ad2815b6075629f0962b 151 Gene3D G3DSA:1.10.10.10 5 144 3.4E-32 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_02431 6bbdad9fb3a0ad2815b6075629f0962b 151 PRINTS PR00598 Bacterial regulatory protein MarR family signature 53 69 8.3E-7 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PhaeoP54_02431 6bbdad9fb3a0ad2815b6075629f0962b 151 PRINTS PR00598 Bacterial regulatory protein MarR family signature 89 105 8.3E-7 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PhaeoP54_02431 6bbdad9fb3a0ad2815b6075629f0962b 151 PRINTS PR00598 Bacterial regulatory protein MarR family signature 70 85 8.3E-7 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PhaeoP54_02431 6bbdad9fb3a0ad2815b6075629f0962b 151 SMART SM00347 29 129 3.5E-22 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PhaeoP54_01472 52fcd93fa3c16d378e986ea65fa2d3dc 423 PIRSF PIRSF006809 1 422 7.2E-133 T 14-10-2018 IPR016496 GTPase HflX GO:0005525 PhaeoP54_01472 52fcd93fa3c16d378e986ea65fa2d3dc 423 SUPERFAMILY SSF52540 203 368 4.37E-40 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_01472 52fcd93fa3c16d378e986ea65fa2d3dc 423 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 10 367 3.2E-131 T 14-10-2018 IPR016496 GTPase HflX GO:0005525 PhaeoP54_01472 52fcd93fa3c16d378e986ea65fa2d3dc 423 Hamap MF_00900 GTPase HflX [hflX]. 30 397 45.341 T 14-10-2018 IPR016496 GTPase HflX GO:0005525 PhaeoP54_01472 52fcd93fa3c16d378e986ea65fa2d3dc 423 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 272 290 3.1E-8 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 PhaeoP54_01472 52fcd93fa3c16d378e986ea65fa2d3dc 423 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 205 225 3.1E-8 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 PhaeoP54_01472 52fcd93fa3c16d378e986ea65fa2d3dc 423 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 226 244 3.1E-8 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 PhaeoP54_01472 52fcd93fa3c16d378e986ea65fa2d3dc 423 Pfam PF16360 GTP-binding GTPase Middle Region 118 197 1.2E-26 T 14-10-2018 IPR032305 GTP-binding protein, middle domain PhaeoP54_01472 52fcd93fa3c16d378e986ea65fa2d3dc 423 Pfam PF01926 50S ribosome-binding GTPase 205 308 3.0E-20 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 PhaeoP54_01472 52fcd93fa3c16d378e986ea65fa2d3dc 423 Gene3D G3DSA:3.40.50.11060 24 142 9.3E-33 T 14-10-2018 PhaeoP54_01472 52fcd93fa3c16d378e986ea65fa2d3dc 423 Pfam PF13167 GTP-binding GTPase N-terminal 30 115 1.1E-22 T 14-10-2018 IPR025121 GTPase HflX, N-terminal PhaeoP54_01472 52fcd93fa3c16d378e986ea65fa2d3dc 423 Gene3D G3DSA:3.40.50.300 202 375 1.3E-39 T 14-10-2018 PhaeoP54_03578 c0f0114e5d838d21e9373ee4462ed50c 375 Pfam PF13403 Hint domain 183 328 5.6E-14 T 14-10-2018 IPR028992 Hedgehog/Intein (Hint) domain PhaeoP54_00284 a7692bc56ecb1bc559ba8a3eebb7f95a 185 Gene3D G3DSA:3.40.1740.10 1 185 7.2E-65 T 14-10-2018 PhaeoP54_00284 a7692bc56ecb1bc559ba8a3eebb7f95a 185 SUPERFAMILY SSF143456 2 185 3.53E-61 T 14-10-2018 PhaeoP54_00284 a7692bc56ecb1bc559ba8a3eebb7f95a 185 Pfam PF02622 Uncharacterized ACR, COG1678 12 172 1.2E-46 T 14-10-2018 IPR003774 Protein of unknown function UPF0301 PhaeoP54_00284 a7692bc56ecb1bc559ba8a3eebb7f95a 185 Hamap MF_00758 UPF0301 protein YqgE [yqgE]. 1 185 37.424 T 14-10-2018 IPR003774 Protein of unknown function UPF0301 PhaeoP54_02499 369569cd7a80c06fd0688367b16b2c69 164 SUPERFAMILY SSF47473 47 152 6.1E-13 T 14-10-2018 IPR011992 EF-hand domain pair PhaeoP54_02499 369569cd7a80c06fd0688367b16b2c69 164 Gene3D G3DSA:1.10.238.10 26 155 3.1E-11 T 14-10-2018 PhaeoP54_02499 369569cd7a80c06fd0688367b16b2c69 164 ProSitePatterns PS00018 EF-hand calcium-binding domain. 111 123 - T 14-10-2018 IPR018247 EF-Hand 1, calcium-binding site PhaeoP54_02499 369569cd7a80c06fd0688367b16b2c69 164 ProSitePatterns PS00018 EF-hand calcium-binding domain. 67 79 - T 14-10-2018 IPR018247 EF-Hand 1, calcium-binding site PhaeoP54_00043 fb5b6d5140551d8e326837794fd79f55 494 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 263 270 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 PhaeoP54_00043 fb5b6d5140551d8e326837794fd79f55 494 Gene3D G3DSA:3.40.605.10 21 488 1.2E-161 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 PhaeoP54_00043 fb5b6d5140551d8e326837794fd79f55 494 SUPERFAMILY SSF53720 12 493 1.57E-151 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 PhaeoP54_00043 fb5b6d5140551d8e326837794fd79f55 494 Gene3D G3DSA:3.40.309.10 268 460 1.2E-161 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 PhaeoP54_00043 fb5b6d5140551d8e326837794fd79f55 494 Pfam PF00171 Aldehyde dehydrogenase family 29 489 8.7E-155 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 PhaeoP54_00043 fb5b6d5140551d8e326837794fd79f55 494 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 292 303 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 PhaeoP54_02349 2bb1324cf81568f9a0f9eab5ead17b8e 249 SUPERFAMILY SSF52218 38 237 2.67E-61 T 14-10-2018 IPR029039 Flavoprotein-like superfamily PhaeoP54_02349 2bb1324cf81568f9a0f9eab5ead17b8e 249 Gene3D G3DSA:3.40.50.360 10 249 2.4E-72 T 14-10-2018 IPR029039 Flavoprotein-like superfamily PhaeoP54_02349 2bb1324cf81568f9a0f9eab5ead17b8e 249 Pfam PF03358 NADPH-dependent FMN reductase 43 189 1.7E-26 T 14-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 PhaeoP54_02349 2bb1324cf81568f9a0f9eab5ead17b8e 249 TIGRFAM TIGR02690 resist_ArsH: arsenical resistance protein ArsH 17 237 7.6E-110 T 14-10-2018 IPR014063 Arsenate resistance ArsH PhaeoP54_02396 471cd0e1344a27089c8e74dcbd7a585f 512 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 149 374 2.9E-73 T 14-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 PhaeoP54_02396 471cd0e1344a27089c8e74dcbd7a585f 512 SUPERFAMILY SSF52540 96 380 1.56E-98 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_02396 471cd0e1344a27089c8e74dcbd7a585f 512 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 381 507 9.3E-44 T 14-10-2018 IPR000793 ATP synthase, alpha subunit, C-terminal GO:0015986 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 PhaeoP54_02396 471cd0e1344a27089c8e74dcbd7a585f 512 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 25 92 5.0E-20 T 14-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 PhaeoP54_02396 471cd0e1344a27089c8e74dcbd7a585f 512 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 1 512 50.781 T 14-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 PhaeoP54_02396 471cd0e1344a27089c8e74dcbd7a585f 512 SUPERFAMILY SSF50615 10 94 4.45E-31 T 14-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 PhaeoP54_02396 471cd0e1344a27089c8e74dcbd7a585f 512 Gene3D G3DSA:2.40.30.20 1 93 1.4E-40 T 14-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 PhaeoP54_02396 471cd0e1344a27089c8e74dcbd7a585f 512 SUPERFAMILY SSF47917 382 511 3.14E-43 T 14-10-2018 PhaeoP54_02396 471cd0e1344a27089c8e74dcbd7a585f 512 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 3 511 2.6E-242 T 14-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 PhaeoP54_02396 471cd0e1344a27089c8e74dcbd7a585f 512 PIRSF PIRSF039088 1 512 3.3E-276 T 14-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 PhaeoP54_02396 471cd0e1344a27089c8e74dcbd7a585f 512 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 365 374 - T 14-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 PhaeoP54_02396 471cd0e1344a27089c8e74dcbd7a585f 512 Gene3D G3DSA:1.20.150.20 382 512 2.0E-51 T 14-10-2018 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 PhaeoP54_02396 471cd0e1344a27089c8e74dcbd7a585f 512 Gene3D G3DSA:3.40.50.300 94 381 9.8E-130 T 14-10-2018 PhaeoP54_02660 36561208bca1b6baf75c30f35f42bcd4 243 Pfam PF00106 short chain dehydrogenase 8 186 2.4E-42 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_02660 36561208bca1b6baf75c30f35f42bcd4 243 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 132 160 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 PhaeoP54_02660 36561208bca1b6baf75c30f35f42bcd4 243 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 5 181 0.0052 T 14-10-2018 PhaeoP54_02660 36561208bca1b6baf75c30f35f42bcd4 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 183 2.3E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_02660 36561208bca1b6baf75c30f35f42bcd4 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 2.3E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_02660 36561208bca1b6baf75c30f35f42bcd4 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 145 164 2.3E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_02660 36561208bca1b6baf75c30f35f42bcd4 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 119 135 2.3E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_02660 36561208bca1b6baf75c30f35f42bcd4 243 SUPERFAMILY SSF51735 3 238 1.24E-58 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PhaeoP54_02660 36561208bca1b6baf75c30f35f42bcd4 243 Gene3D G3DSA:3.40.50.720 1 239 9.0E-55 T 14-10-2018 PhaeoP54_03368 f51b32b857d7c93e30f62040a2c6aaba 348 SUPERFAMILY SSF51735 147 312 3.67E-34 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PhaeoP54_03368 f51b32b857d7c93e30f62040a2c6aaba 348 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 31 141 2.9E-24 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 PhaeoP54_03368 f51b32b857d7c93e30f62040a2c6aaba 348 Gene3D G3DSA:3.40.50.720 159 293 6.1E-107 T 14-10-2018 PhaeoP54_03368 f51b32b857d7c93e30f62040a2c6aaba 348 SUPERFAMILY SSF50129 3 179 1.11E-48 T 14-10-2018 IPR011032 GroES-like superfamily PhaeoP54_03368 f51b32b857d7c93e30f62040a2c6aaba 348 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 68 82 - T 14-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 PhaeoP54_03368 f51b32b857d7c93e30f62040a2c6aaba 348 SMART SM00829 18 345 1.3E-4 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 PhaeoP54_03368 f51b32b857d7c93e30f62040a2c6aaba 348 Pfam PF00107 Zinc-binding dehydrogenase 180 305 3.2E-23 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 PhaeoP54_03368 f51b32b857d7c93e30f62040a2c6aaba 348 Gene3D G3DSA:3.90.180.10 27 335 6.1E-107 T 14-10-2018 PhaeoP54_01119 b0324f7c85ad02193b5fa96cc75d9f68 298 SUPERFAMILY SSF103481 44 141 4.05E-12 T 14-10-2018 PhaeoP54_01119 b0324f7c85ad02193b5fa96cc75d9f68 298 SUPERFAMILY SSF103481 186 283 4.18E-12 T 14-10-2018 PhaeoP54_01119 b0324f7c85ad02193b5fa96cc75d9f68 298 Pfam PF00892 EamA-like transporter family 146 276 3.1E-7 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 PhaeoP54_01119 b0324f7c85ad02193b5fa96cc75d9f68 298 Pfam PF00892 EamA-like transporter family 5 137 1.0E-13 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 PhaeoP54_00765 311d1eb232631c996bd53f46c44d5d77 373 SUPERFAMILY SSF52540 25 245 1.99E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_00765 311d1eb232631c996bd53f46c44d5d77 373 Gene3D G3DSA:3.40.50.300 25 206 5.6E-46 T 14-10-2018 PhaeoP54_00765 311d1eb232631c996bd53f46c44d5d77 373 SMART SM00382 44 206 0.0027 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_00765 311d1eb232631c996bd53f46c44d5d77 373 Pfam PF13177 DNA polymerase III, delta subunit 27 207 9.7E-35 T 14-10-2018 PhaeoP54_00541 9704b1b07245342fdc1af3c8062c7d8d 521 Gene3D G3DSA:2.160.20.100 292 426 2.1E-15 T 14-10-2018 PhaeoP54_00541 9704b1b07245342fdc1af3c8062c7d8d 521 Pfam PF13599 Pentapeptide repeats (9 copies) 324 394 4.2E-7 T 14-10-2018 IPR001646 Pentapeptide repeat PhaeoP54_00541 9704b1b07245342fdc1af3c8062c7d8d 521 SUPERFAMILY SSF141571 304 397 1.01E-15 T 14-10-2018 PhaeoP54_00384 49d1168fb8879e2ee71989559f16c8b7 399 Gene3D G3DSA:1.10.540.10 2 120 8.9E-30 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 PhaeoP54_00384 49d1168fb8879e2ee71989559f16c8b7 399 SUPERFAMILY SSF47203 231 396 3.63E-27 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 PhaeoP54_00384 49d1168fb8879e2ee71989559f16c8b7 399 SUPERFAMILY SSF56645 2 244 6.15E-80 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 PhaeoP54_00384 49d1168fb8879e2ee71989559f16c8b7 399 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 125 216 1.7E-20 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 PhaeoP54_00384 49d1168fb8879e2ee71989559f16c8b7 399 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 231 394 1.4E-26 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PhaeoP54_00384 49d1168fb8879e2ee71989559f16c8b7 399 Gene3D G3DSA:2.40.110.10 124 234 6.2E-39 T 14-10-2018 PhaeoP54_00384 49d1168fb8879e2ee71989559f16c8b7 399 Gene3D G3DSA:1.20.140.10 235 398 2.1E-37 T 14-10-2018 PhaeoP54_00384 49d1168fb8879e2ee71989559f16c8b7 399 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 7 121 1.3E-21 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 PhaeoP54_01988 0c007342d337ff6686c7e2b7441d7ec4 291 Pfam PF00175 Oxidoreductase NAD-binding domain 143 257 4.0E-5 T 14-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 PhaeoP54_01988 0c007342d337ff6686c7e2b7441d7ec4 291 Gene3D G3DSA:3.40.50.80 130 288 2.8E-32 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain PhaeoP54_01988 0c007342d337ff6686c7e2b7441d7ec4 291 SUPERFAMILY SSF63380 30 129 1.25E-20 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel PhaeoP54_01988 0c007342d337ff6686c7e2b7441d7ec4 291 Gene3D G3DSA:2.40.30.10 26 125 4.8E-25 T 14-10-2018 PhaeoP54_01988 0c007342d337ff6686c7e2b7441d7ec4 291 SUPERFAMILY SSF52343 133 289 1.83E-29 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain PhaeoP54_00866 1e1a7cb4513a943fa689c8ae4f510bb9 151 SUPERFAMILY SSF52980 8 85 8.04E-8 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 PhaeoP54_00866 1e1a7cb4513a943fa689c8ae4f510bb9 151 Gene3D G3DSA:3.40.1350.10 1 146 1.3E-61 T 14-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 PhaeoP54_00866 1e1a7cb4513a943fa689c8ae4f510bb9 151 PIRSF PIRSF031796 7 146 1.7E-42 T 14-10-2018 IPR009394 DNA repair protein MmcB-like PhaeoP54_00866 1e1a7cb4513a943fa689c8ae4f510bb9 151 Pfam PF06319 DNA repair protein MmcB-like 11 141 3.0E-48 T 14-10-2018 IPR009394 DNA repair protein MmcB-like PhaeoP54_02960 f4a7fadb6399872a6c29a5d3d798073c 437 SUPERFAMILY SSF55931 100 433 8.44E-73 T 14-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 PhaeoP54_02960 f4a7fadb6399872a6c29a5d3d798073c 437 Pfam PF00120 Glutamine synthetase, catalytic domain 101 422 3.0E-63 T 14-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PhaeoP54_02960 f4a7fadb6399872a6c29a5d3d798073c 437 Gene3D G3DSA:3.30.590.10 96 437 1.7E-88 T 14-10-2018 PhaeoP54_02960 f4a7fadb6399872a6c29a5d3d798073c 437 Pfam PF16952 Glutamine synthetase N-terminal domain 7 98 7.3E-17 T 14-10-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 PhaeoP54_02960 f4a7fadb6399872a6c29a5d3d798073c 437 Gene3D G3DSA:3.10.20.70 2 95 2.1E-29 T 14-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PhaeoP54_02960 f4a7fadb6399872a6c29a5d3d798073c 437 SMART SM01230 99 347 3.4E-58 T 14-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PhaeoP54_04075 d2801d418e4dacf6729de867b388e51c 414 SUPERFAMILY SSF53756 15 389 3.14E-40 T 14-10-2018 PhaeoP54_04075 d2801d418e4dacf6729de867b388e51c 414 Gene3D G3DSA:3.40.50.2000 188 384 5.7E-33 T 14-10-2018 PhaeoP54_04075 d2801d418e4dacf6729de867b388e51c 414 Gene3D G3DSA:3.40.50.2000 15 389 5.7E-33 T 14-10-2018 PhaeoP54_04075 d2801d418e4dacf6729de867b388e51c 414 Pfam PF00534 Glycosyl transferases group 1 213 382 9.8E-16 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 PhaeoP54_04075 d2801d418e4dacf6729de867b388e51c 414 Pfam PF12000 Gkycosyl transferase family 4 group 26 192 2.4E-55 T 14-10-2018 IPR022623 Domain of unknown function DUF3495 PhaeoP54_03989 cb2a2dada9d6d626d398cb9e4052dd20 787 Pfam PF03135 CagE, TrbE, VirB family, component of type IV transporter system 186 377 1.1E-28 T 14-10-2018 IPR018145 CagE, TrbE, VirB component of type IV transporter system, central domain GO:0005524 PhaeoP54_03989 cb2a2dada9d6d626d398cb9e4052dd20 787 SUPERFAMILY SSF52540 400 717 1.08E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_03989 cb2a2dada9d6d626d398cb9e4052dd20 787 SMART SM00382 438 709 3.2E-4 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_03989 cb2a2dada9d6d626d398cb9e4052dd20 787 Gene3D G3DSA:3.40.50.300 593 757 7.7E-17 T 14-10-2018 PhaeoP54_03989 cb2a2dada9d6d626d398cb9e4052dd20 787 Gene3D G3DSA:3.40.50.300 432 592 2.3E-8 T 14-10-2018 PhaeoP54_02589 3f5e55773dcc50ddb89a9bb78322c31d 363 Gene3D G3DSA:1.10.3470.10 23 363 1.1E-95 T 14-10-2018 IPR037294 ABC transporter, BtuC-like PhaeoP54_02589 3f5e55773dcc50ddb89a9bb78322c31d 363 Pfam PF01032 FecCD transport family 36 362 9.9E-92 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 PhaeoP54_02589 3f5e55773dcc50ddb89a9bb78322c31d 363 SUPERFAMILY SSF81345 19 363 3.27E-80 T 14-10-2018 IPR037294 ABC transporter, BtuC-like PhaeoP54_03511 45b096a8ad269e33617cee76447b1cd5 359 Gene3D G3DSA:3.40.1690.10 219 358 3.2E-47 T 14-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal PhaeoP54_03511 45b096a8ad269e33617cee76447b1cd5 359 SUPERFAMILY SSF160544 245 352 2.62E-34 T 14-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal PhaeoP54_03511 45b096a8ad269e33617cee76447b1cd5 359 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 273 288 1.1E-31 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 PhaeoP54_03511 45b096a8ad269e33617cee76447b1cd5 359 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 9 31 1.1E-31 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 PhaeoP54_03511 45b096a8ad269e33617cee76447b1cd5 359 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 209 227 1.1E-31 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 PhaeoP54_03511 45b096a8ad269e33617cee76447b1cd5 359 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 229 246 1.1E-31 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 PhaeoP54_03511 45b096a8ad269e33617cee76447b1cd5 359 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 303 324 1.1E-31 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 PhaeoP54_03511 45b096a8ad269e33617cee76447b1cd5 359 Pfam PF01312 FlhB HrpN YscU SpaS Family 7 347 5.5E-107 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 PhaeoP54_02303 85396788efaa947314ac7107f5acb4d2 152 Pfam PF00293 NUDIX domain 23 149 1.2E-9 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 PhaeoP54_02303 85396788efaa947314ac7107f5acb4d2 152 SUPERFAMILY SSF55811 15 152 1.49E-19 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 PhaeoP54_02303 85396788efaa947314ac7107f5acb4d2 152 Gene3D G3DSA:3.90.79.10 21 152 2.2E-23 T 14-10-2018 PhaeoP54_00461 d36c210ff49af497ebb9c0f96d4f655a 127 Pfam PF09996 Uncharacterized protein conserved in bacteria (DUF2237) 8 121 1.3E-50 T 14-10-2018 IPR018714 Protein of unknown function DUF2237 PhaeoP54_00461 d36c210ff49af497ebb9c0f96d4f655a 127 Gene3D G3DSA:3.30.56.110 4 127 5.1E-50 T 14-10-2018 PhaeoP54_00047 3660c3db4fd73c483a40d17f5d0d42a3 327 Gene3D G3DSA:3.10.180.10 3 147 2.0E-41 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PhaeoP54_00047 3660c3db4fd73c483a40d17f5d0d42a3 327 Gene3D G3DSA:3.10.180.10 149 308 8.0E-48 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PhaeoP54_00047 3660c3db4fd73c483a40d17f5d0d42a3 327 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 149 266 5.2E-17 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain PhaeoP54_00047 3660c3db4fd73c483a40d17f5d0d42a3 327 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 17 125 1.8E-10 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain PhaeoP54_00047 3660c3db4fd73c483a40d17f5d0d42a3 327 ProSitePatterns PS00934 Glyoxalase I signature 1. 19 40 - T 14-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 PhaeoP54_00047 3660c3db4fd73c483a40d17f5d0d42a3 327 SUPERFAMILY SSF54593 7 273 3.35E-47 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PhaeoP54_00047 3660c3db4fd73c483a40d17f5d0d42a3 327 ProSitePatterns PS00082 Extradiol ring-cleavage dioxygenases signature. 244 265 - T 14-10-2018 IPR000486 Extradiol ring-cleavage dioxygenase, class I /II GO:0003824|GO:0006725|GO:0008198|GO:0055114 PhaeoP54_00047 3660c3db4fd73c483a40d17f5d0d42a3 327 TIGRFAM TIGR02295 HpaD: 3,4-dihydroxyphenylacetate 2,3-dioxygenase 13 307 9.2E-125 T 14-10-2018 IPR011981 3,4-dihydroxyphenylacetate 2,3-dioxygenase, Mn/Fe-type PhaeoP54_00776 63816f3d0a52e77457220515ec134e3b 264 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 3 208 1.7E-43 T 14-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 PhaeoP54_00776 63816f3d0a52e77457220515ec134e3b 264 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 76 109 - T 14-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 PhaeoP54_00776 63816f3d0a52e77457220515ec134e3b 264 TIGRFAM TIGR01465 cobM_cbiF: precorrin-4 C11-methyltransferase 3 248 3.0E-95 T 14-10-2018 IPR006362 Cobalamin (vitamin B12) biosynthesis CobM/CbiF, precorrin-4 C11-methyltransferase GO:0009236|GO:0046026 PhaeoP54_00776 63816f3d0a52e77457220515ec134e3b 264 Gene3D G3DSA:3.40.1010.10 1 110 4.7E-28 T 14-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 PhaeoP54_00776 63816f3d0a52e77457220515ec134e3b 264 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 6 20 - T 14-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 PhaeoP54_00776 63816f3d0a52e77457220515ec134e3b 264 Gene3D G3DSA:3.30.950.10 111 230 2.6E-42 T 14-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 PhaeoP54_00776 63816f3d0a52e77457220515ec134e3b 264 SUPERFAMILY SSF53790 2 247 2.36E-62 T 14-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 PhaeoP54_01048 ac25fec825fdf20040415a474f128fa6 215 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 11 209 1.8E-57 T 14-10-2018 PhaeoP54_01048 ac25fec825fdf20040415a474f128fa6 215 Hamap MF_00090 Protein-L-isoaspartate O-methyltransferase [pcm]. 2 213 35.183 T 14-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 PhaeoP54_01048 ac25fec825fdf20040415a474f128fa6 215 ProSitePatterns PS01279 Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 133 148 - T 14-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 PhaeoP54_01048 ac25fec825fdf20040415a474f128fa6 215 Gene3D G3DSA:3.40.50.150 2 214 1.2E-72 T 14-10-2018 PhaeoP54_01048 ac25fec825fdf20040415a474f128fa6 215 SUPERFAMILY SSF53335 16 211 3.56E-47 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PhaeoP54_01048 ac25fec825fdf20040415a474f128fa6 215 TIGRFAM TIGR00080 pimt: protein-L-isoaspartate O-methyltransferase 7 211 6.4E-59 T 14-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 PhaeoP54_02928 afa482d47b8db33f2bf5442a996f2fcb 221 SUPERFAMILY SSF55895 34 217 4.84E-40 T 14-10-2018 IPR036430 Ribonuclease T2-like superfamily GO:0003723|GO:0033897 Reactome: R-HSA-6798695 PhaeoP54_02928 afa482d47b8db33f2bf5442a996f2fcb 221 Gene3D G3DSA:3.90.730.10 28 216 1.4E-34 T 14-10-2018 IPR036430 Ribonuclease T2-like superfamily GO:0003723|GO:0033897 Reactome: R-HSA-6798695 PhaeoP54_02928 afa482d47b8db33f2bf5442a996f2fcb 221 Pfam PF00445 Ribonuclease T2 family 38 200 9.0E-13 T 14-10-2018 IPR001568 Ribonuclease T2-like GO:0003723|GO:0033897 Reactome: R-HSA-6798695 PhaeoP54_02928 afa482d47b8db33f2bf5442a996f2fcb 221 ProSitePatterns PS00530 Ribonuclease T2 family histidine active site 1. 70 77 - T 14-10-2018 IPR018188 Ribonuclease T2, His active site 1 GO:0003723|GO:0033897 Reactome: R-HSA-6798695 PhaeoP54_02928 afa482d47b8db33f2bf5442a996f2fcb 221 ProSitePatterns PS00531 Ribonuclease T2 family histidine active site 2. 111 122 - T 14-10-2018 IPR033130 Ribonuclease T2, His active site 2 Reactome: R-HSA-6798695 PhaeoP54_00492 b4a6891ef09959f983ccfdf67d17eb3b 358 Gene3D G3DSA:2.40.50.940 222 351 3.0E-9 T 14-10-2018 PhaeoP54_00492 b4a6891ef09959f983ccfdf67d17eb3b 358 SMART SM00382 27 212 4.9E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_00492 b4a6891ef09959f983ccfdf67d17eb3b 358 Gene3D G3DSA:2.40.50.140 281 342 3.0E-9 T 14-10-2018 PhaeoP54_00492 b4a6891ef09959f983ccfdf67d17eb3b 358 SUPERFAMILY SSF52540 3 242 2.07E-64 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_00492 b4a6891ef09959f983ccfdf67d17eb3b 358 Pfam PF00005 ABC transporter 19 160 3.7E-26 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PhaeoP54_00492 b4a6891ef09959f983ccfdf67d17eb3b 358 SUPERFAMILY SSF50331 236 357 1.62E-16 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal PhaeoP54_00492 b4a6891ef09959f983ccfdf67d17eb3b 358 Gene3D G3DSA:3.40.50.300 3 221 1.3E-51 T 14-10-2018 PhaeoP54_03373 1888f00233f16c6db260704a280e4d20 423 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 221 412 1.7E-17 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PhaeoP54_03373 1888f00233f16c6db260704a280e4d20 423 Gene3D G3DSA:1.10.3720.10 176 422 3.4E-50 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_03373 1888f00233f16c6db260704a280e4d20 423 SUPERFAMILY SSF161098 197 411 2.09E-47 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_00996 8fb38656febb2582ee97b7a5c7804c14 411 PIRSF PIRSF000390 16 406 9.1E-58 T 14-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase PhaeoP54_00996 8fb38656febb2582ee97b7a5c7804c14 411 Gene3D G3DSA:3.90.1150.10 267 405 3.9E-11 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 PhaeoP54_00996 8fb38656febb2582ee97b7a5c7804c14 411 SUPERFAMILY SSF53383 23 400 1.29E-71 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PhaeoP54_00996 8fb38656febb2582ee97b7a5c7804c14 411 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 26 398 9.4E-60 T 14-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase PhaeoP54_00996 8fb38656febb2582ee97b7a5c7804c14 411 Gene3D G3DSA:3.40.640.10 11 266 4.9E-52 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PhaeoP54_01622 b3b7ba61ac6c11a3bd60b21d6025b538 309 PIRSF PIRSF028188 1 304 4.8E-116 T 14-10-2018 IPR014541 Predicted amidinotransferase, FN0238 type PhaeoP54_01622 b3b7ba61ac6c11a3bd60b21d6025b538 309 Pfam PF02274 Amidinotransferase 12 300 9.5E-73 T 14-10-2018 PhaeoP54_01622 b3b7ba61ac6c11a3bd60b21d6025b538 309 Gene3D G3DSA:3.75.10.10 10 296 4.0E-42 T 14-10-2018 PhaeoP54_01622 b3b7ba61ac6c11a3bd60b21d6025b538 309 SUPERFAMILY SSF55909 9 297 3.01E-41 T 14-10-2018 PhaeoP54_03313 35bb603ebedb022442612c7d85ccef84 160 SUPERFAMILY SSF69287 13 69 1.09E-9 T 14-10-2018 IPR036118 UreE urease accessory, N-terminal domain superfamily PhaeoP54_03313 35bb603ebedb022442612c7d85ccef84 160 SUPERFAMILY SSF69737 72 135 2.49E-19 T 14-10-2018 IPR036675 UreE, C-terminal domain superfamily GO:0016151|GO:0019627|GO:0065003 PhaeoP54_03313 35bb603ebedb022442612c7d85ccef84 160 SMART SM00988 3 65 5.2E-11 T 14-10-2018 IPR004029 UreE urease accessory, N-terminal PhaeoP54_03313 35bb603ebedb022442612c7d85ccef84 160 Pfam PF05194 UreE urease accessory protein, C-terminal domain 74 158 5.2E-27 T 14-10-2018 IPR007864 Urease accessory protein UreE, C-terminal domain GO:0016151|GO:0019627|GO:0065003 PhaeoP54_03313 35bb603ebedb022442612c7d85ccef84 160 Pfam PF02814 UreE urease accessory protein, N-terminal domain 13 63 8.9E-14 T 14-10-2018 IPR004029 UreE urease accessory, N-terminal PhaeoP54_03313 35bb603ebedb022442612c7d85ccef84 160 Gene3D G3DSA:2.60.260.20 3 70 6.9E-7 T 14-10-2018 PhaeoP54_03313 35bb603ebedb022442612c7d85ccef84 160 PIRSF PIRSF036402 2 160 6.2E-35 T 14-10-2018 IPR012406 Urease accessory protein UreE GO:0005737|GO:0006457|GO:0016151|GO:0018307 PhaeoP54_03313 35bb603ebedb022442612c7d85ccef84 160 Gene3D G3DSA:3.30.70.790 72 139 3.0E-25 T 14-10-2018 IPR036675 UreE, C-terminal domain superfamily GO:0016151|GO:0019627|GO:0065003 PhaeoP54_03313 35bb603ebedb022442612c7d85ccef84 160 Hamap MF_00822 Urease accessory protein UreE [ureE]. 5 136 20.036 T 14-10-2018 IPR012406 Urease accessory protein UreE GO:0005737|GO:0006457|GO:0016151|GO:0018307 PhaeoP54_00706 1727fa9ea991a1befe7c814a3c663635 416 Gene3D G3DSA:3.40.190.10 44 359 5.6E-111 T 14-10-2018 PhaeoP54_00706 1727fa9ea991a1befe7c814a3c663635 416 SUPERFAMILY SSF53850 27 414 5.43E-66 T 14-10-2018 PhaeoP54_00706 1727fa9ea991a1befe7c814a3c663635 416 Pfam PF01547 Bacterial extracellular solute-binding protein 43 330 4.6E-31 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein PhaeoP54_00706 1727fa9ea991a1befe7c814a3c663635 416 Gene3D G3DSA:3.40.190.10 141 396 5.6E-111 T 14-10-2018 PhaeoP54_03592 b2b0a1078472dab91b27d9c67e533810 380 Gene3D G3DSA:3.90.1530.30 111 164 2.7E-9 T 14-10-2018 PhaeoP54_03592 b2b0a1078472dab91b27d9c67e533810 380 Pfam PF02195 ParB-like nuclease domain 100 160 2.3E-8 T 14-10-2018 IPR003115 ParB/Sulfiredoxin PhaeoP54_03592 b2b0a1078472dab91b27d9c67e533810 380 SUPERFAMILY SSF110849 92 198 5.58E-13 T 14-10-2018 IPR036086 ParB/Sulfiredoxin superfamily PhaeoP54_03592 b2b0a1078472dab91b27d9c67e533810 380 SMART SM00470 101 195 0.0079 T 14-10-2018 IPR003115 ParB/Sulfiredoxin PhaeoP54_02621 af11469a49f072b8037860d3ef19f85a 460 Pfam PF00171 Aldehyde dehydrogenase family 3 452 1.6E-115 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 PhaeoP54_02621 af11469a49f072b8037860d3ef19f85a 460 Gene3D G3DSA:3.40.605.10 2 451 5.9E-131 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 PhaeoP54_02621 af11469a49f072b8037860d3ef19f85a 460 Gene3D G3DSA:3.40.309.10 234 423 5.9E-131 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 PhaeoP54_02621 af11469a49f072b8037860d3ef19f85a 460 SUPERFAMILY SSF53720 2 456 4.32E-127 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 PhaeoP54_02201 af11469a49f072b8037860d3ef19f85a 460 Pfam PF00171 Aldehyde dehydrogenase family 3 452 1.6E-115 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 PhaeoP54_02201 af11469a49f072b8037860d3ef19f85a 460 Gene3D G3DSA:3.40.605.10 2 451 5.9E-131 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 PhaeoP54_02201 af11469a49f072b8037860d3ef19f85a 460 Gene3D G3DSA:3.40.309.10 234 423 5.9E-131 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 PhaeoP54_02201 af11469a49f072b8037860d3ef19f85a 460 SUPERFAMILY SSF53720 2 456 4.32E-127 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 PhaeoP54_01570 b1db7b4a9fa047252fe6a0c0f2d96aac 298 Pfam PF03755 YicC-like family, N-terminal region 3 161 2.3E-35 T 14-10-2018 IPR013527 YicC-like, N-terminal PhaeoP54_01570 b1db7b4a9fa047252fe6a0c0f2d96aac 298 TIGRFAM TIGR00255 TIGR00255: TIGR00255 family protein 3 298 2.9E-72 T 14-10-2018 IPR005229 Conserved hypothetical protein CHP00255 PhaeoP54_01570 b1db7b4a9fa047252fe6a0c0f2d96aac 298 Pfam PF08340 Domain of unknown function (DUF1732) 214 298 4.9E-34 T 14-10-2018 IPR013551 Domain of unknown function DUF1732 PhaeoP54_02437 e017236ff44e0a13a8bfcbe026a45393 339 Gene3D G3DSA:3.40.640.10 5 245 8.4E-80 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PhaeoP54_02437 e017236ff44e0a13a8bfcbe026a45393 339 PIRSF PIRSF017617 1 339 1.5E-122 T 14-10-2018 IPR023603 Threonine aldolase PhaeoP54_02437 e017236ff44e0a13a8bfcbe026a45393 339 SUPERFAMILY SSF53383 1 335 1.05E-104 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PhaeoP54_02437 e017236ff44e0a13a8bfcbe026a45393 339 Pfam PF01212 Beta-eliminating lyase 3 287 1.6E-83 T 14-10-2018 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 PhaeoP54_02437 e017236ff44e0a13a8bfcbe026a45393 339 Gene3D G3DSA:3.90.1150.10 247 339 2.2E-22 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 PhaeoP54_00832 be4bdb2e7637511f63c14c76a80cb3f7 580 Pfam PF02272 DHHA1 domain 328 451 1.9E-20 T 14-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 PhaeoP54_00832 be4bdb2e7637511f63c14c76a80cb3f7 580 SUPERFAMILY SSF64182 65 455 2.75E-110 T 14-10-2018 IPR038763 DHH phosphoesterase superfamily PhaeoP54_00832 be4bdb2e7637511f63c14c76a80cb3f7 580 Gene3D G3DSA:3.90.1640.30 66 332 1.3E-77 T 14-10-2018 PhaeoP54_00832 be4bdb2e7637511f63c14c76a80cb3f7 580 Pfam PF01368 DHH family 91 218 1.8E-6 T 14-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 PhaeoP54_00832 be4bdb2e7637511f63c14c76a80cb3f7 580 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 38 576 1.8E-145 T 14-10-2018 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 PhaeoP54_00832 be4bdb2e7637511f63c14c76a80cb3f7 580 Gene3D G3DSA:3.10.310.30 333 456 4.2E-28 T 14-10-2018 PhaeoP54_00979 38c72dabce17e151412dc886c912dc72 357 Pfam PF04143 Sulphur transport 35 331 3.7E-51 T 14-10-2018 IPR007272 Sulphur transport domain PhaeoP54_02131 624bdba5a90816bb8fef537019af5e87 308 ProSitePatterns PS01174 Lipolytic enzymes "G-D-X-G" family, putative serine active site. 143 155 - T 14-10-2018 IPR033140 Lipase, GDXG, putative serine active site PhaeoP54_02131 624bdba5a90816bb8fef537019af5e87 308 Pfam PF07859 alpha/beta hydrolase fold 77 277 3.4E-55 T 14-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 PhaeoP54_02131 624bdba5a90816bb8fef537019af5e87 308 SUPERFAMILY SSF53474 29 292 4.09E-50 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold PhaeoP54_02131 624bdba5a90816bb8fef537019af5e87 308 Gene3D G3DSA:3.40.50.1820 4 299 4.3E-66 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold PhaeoP54_02433 0bf276f53fa3744f0a86f959c0f88204 317 Pfam PF00199 Catalase 43 314 4.7E-8 T 14-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 PhaeoP54_02433 0bf276f53fa3744f0a86f959c0f88204 317 SUPERFAMILY SSF56634 33 313 1.09E-47 T 14-10-2018 IPR020835 Catalase superfamily GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 PhaeoP54_02433 0bf276f53fa3744f0a86f959c0f88204 317 Gene3D G3DSA:1.20.1280.120 31 307 1.1E-68 T 14-10-2018 PhaeoP54_02433 0bf276f53fa3744f0a86f959c0f88204 317 Gene3D G3DSA:2.40.180.20 49 295 1.1E-68 T 14-10-2018 PhaeoP54_03114 4dd0fb78762369d08218512decb860cc 303 Pfam PF03186 CobD/Cbib protein 8 284 1.0E-93 T 14-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 PhaeoP54_03114 4dd0fb78762369d08218512decb860cc 303 Hamap MF_00024 Cobalamin biosynthesis protein CbiB [cbiB]. 1 303 93.077 T 14-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 PhaeoP54_03114 4dd0fb78762369d08218512decb860cc 303 TIGRFAM TIGR00380 cobD: cobalamin biosynthesis protein CobD 5 259 1.3E-59 T 14-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 PhaeoP54_00741 ee7f67cd8aff045779b0f4f1807232fb 442 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 20 432 6.5E-87 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit PhaeoP54_00741 ee7f67cd8aff045779b0f4f1807232fb 442 PIRSF PIRSF006066 16 442 6.7E-102 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 PhaeoP54_00741 ee7f67cd8aff045779b0f4f1807232fb 442 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 30 436 1.3E-90 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 PhaeoP54_00129 02483c5270791f0922716bca969933f4 470 SUPERFAMILY SSF53383 1 469 1.24E-131 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PhaeoP54_00129 02483c5270791f0922716bca969933f4 470 PRINTS PR00800 Aromatic-L-amino-acid decarboxylase signature 342 357 2.3E-37 T 14-10-2018 IPR010977 Aromatic-L-amino-acid decarboxylase GO:0006520|GO:0016831 PhaeoP54_00129 02483c5270791f0922716bca969933f4 470 PRINTS PR00800 Aromatic-L-amino-acid decarboxylase signature 6 25 2.3E-37 T 14-10-2018 IPR010977 Aromatic-L-amino-acid decarboxylase GO:0006520|GO:0016831 PhaeoP54_00129 02483c5270791f0922716bca969933f4 470 PRINTS PR00800 Aromatic-L-amino-acid decarboxylase signature 94 112 2.3E-37 T 14-10-2018 IPR010977 Aromatic-L-amino-acid decarboxylase GO:0006520|GO:0016831 PhaeoP54_00129 02483c5270791f0922716bca969933f4 470 PRINTS PR00800 Aromatic-L-amino-acid decarboxylase signature 73 92 2.3E-37 T 14-10-2018 IPR010977 Aromatic-L-amino-acid decarboxylase GO:0006520|GO:0016831 PhaeoP54_00129 02483c5270791f0922716bca969933f4 470 PRINTS PR00800 Aromatic-L-amino-acid decarboxylase signature 385 404 2.3E-37 T 14-10-2018 IPR010977 Aromatic-L-amino-acid decarboxylase GO:0006520|GO:0016831 PhaeoP54_00129 02483c5270791f0922716bca969933f4 470 PRINTS PR00800 Aromatic-L-amino-acid decarboxylase signature 113 132 2.3E-37 T 14-10-2018 IPR010977 Aromatic-L-amino-acid decarboxylase GO:0006520|GO:0016831 PhaeoP54_00129 02483c5270791f0922716bca969933f4 470 PRINTS PR00800 Aromatic-L-amino-acid decarboxylase signature 29 46 2.3E-37 T 14-10-2018 IPR010977 Aromatic-L-amino-acid decarboxylase GO:0006520|GO:0016831 PhaeoP54_00129 02483c5270791f0922716bca969933f4 470 PRINTS PR00800 Aromatic-L-amino-acid decarboxylase signature 47 66 2.3E-37 T 14-10-2018 IPR010977 Aromatic-L-amino-acid decarboxylase GO:0006520|GO:0016831 PhaeoP54_00129 02483c5270791f0922716bca969933f4 470 Gene3D G3DSA:1.20.1340.10 1 81 4.8E-26 T 14-10-2018 PhaeoP54_00129 02483c5270791f0922716bca969933f4 470 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 35 403 6.8E-99 T 14-10-2018 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 PhaeoP54_00129 02483c5270791f0922716bca969933f4 470 Gene3D G3DSA:3.90.1150.10 370 470 7.8E-18 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 PhaeoP54_00129 02483c5270791f0922716bca969933f4 470 Gene3D G3DSA:3.40.640.10 83 369 1.3E-91 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PhaeoP54_02936 d828215ceb57e8e39988304c503911ea 371 PIRSF PIRSF000183 1 371 1.1E-152 T 14-10-2018 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1 PhaeoP54_02936 d828215ceb57e8e39988304c503911ea 371 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 137 5.0E-46 T 14-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal PhaeoP54_02936 d828215ceb57e8e39988304c503911ea 371 TIGRFAM TIGR00518 alaDH: alanine dehydrogenase 1 367 2.6E-157 T 14-10-2018 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1 PhaeoP54_02936 d828215ceb57e8e39988304c503911ea 371 SUPERFAMILY SSF52283 1 360 2.72E-67 T 14-10-2018 PhaeoP54_02936 d828215ceb57e8e39988304c503911ea 371 Gene3D G3DSA:3.40.50.720 3 351 8.0E-138 T 14-10-2018 PhaeoP54_02936 d828215ceb57e8e39988304c503911ea 371 SMART SM01002 149 297 1.9E-88 T 14-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain PhaeoP54_02936 d828215ceb57e8e39988304c503911ea 371 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 141 352 3.6E-84 T 14-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain PhaeoP54_02936 d828215ceb57e8e39988304c503911ea 371 SUPERFAMILY SSF51735 137 303 1.53E-50 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PhaeoP54_02936 d828215ceb57e8e39988304c503911ea 371 SMART SM01003 4 137 2.2E-77 T 14-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal PhaeoP54_02936 d828215ceb57e8e39988304c503911ea 371 Gene3D G3DSA:3.40.50.720 130 305 8.0E-138 T 14-10-2018 PhaeoP54_02936 d828215ceb57e8e39988304c503911ea 371 ProSitePatterns PS00837 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 2. 173 198 - T 14-10-2018 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 GO:0016491|GO:0055114 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|Reactome: R-HSA-71403 PhaeoP54_03665 ad0fdb0a01f78ac99cf5468e81e28718 341 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 21 333 1.7E-54 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme PhaeoP54_03665 ad0fdb0a01f78ac99cf5468e81e28718 341 SUPERFAMILY SSF53686 17 337 4.85E-56 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme PhaeoP54_03665 ad0fdb0a01f78ac99cf5468e81e28718 341 Gene3D G3DSA:3.40.50.1100 52 169 1.9E-84 T 14-10-2018 PhaeoP54_03665 ad0fdb0a01f78ac99cf5468e81e28718 341 Gene3D G3DSA:3.40.50.1100 15 321 1.9E-84 T 14-10-2018 PhaeoP54_01368 61bdf7d26971e6d861b5532332814c98 545 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 85 542 5.6E-140 T 14-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 PhaeoP54_01368 61bdf7d26971e6d861b5532332814c98 545 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 46 542 4.5E-181 T 14-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 PhaeoP54_03518 7b9bf4cc6cb8895743277a6b5236f425 90 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 19 40 1.8E-18 T 14-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 PhaeoP54_03518 7b9bf4cc6cb8895743277a6b5236f425 90 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 55 77 1.8E-18 T 14-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 PhaeoP54_03518 7b9bf4cc6cb8895743277a6b5236f425 90 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 40 55 1.8E-18 T 14-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 PhaeoP54_03518 7b9bf4cc6cb8895743277a6b5236f425 90 Pfam PF01313 Bacterial export proteins, family 3 8 78 7.8E-27 T 14-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 PhaeoP54_03518 7b9bf4cc6cb8895743277a6b5236f425 90 PIRSF PIRSF004669 2 87 6.0E-26 T 14-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 PhaeoP54_00393 192aa3dbd5d57ac20394d76eabdfed6b 204 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 109 143 2.1E-7 T 14-10-2018 IPR001451 Hexapeptide repeat PhaeoP54_00393 192aa3dbd5d57ac20394d76eabdfed6b 204 SUPERFAMILY SSF51161 9 199 1.14E-33 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily PhaeoP54_00393 192aa3dbd5d57ac20394d76eabdfed6b 204 Gene3D G3DSA:2.160.10.10 7 204 4.5E-42 T 14-10-2018 PhaeoP54_00393 192aa3dbd5d57ac20394d76eabdfed6b 204 TIGRFAM TIGR03308 phn_thr-fam: phosphonate metabolim protein, transferase hexapeptide repeat family 3 204 5.7E-94 T 14-10-2018 IPR017694 Phosphonate metabolism protein, transferase hexapeptide repeat family PhaeoP54_00393 192aa3dbd5d57ac20394d76eabdfed6b 204 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 117 145 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 PhaeoP54_01775 4cd568f0f562634b79bfaea1a1b9233a 215 TIGRFAM TIGR02215 phage_chp_gp8: phage conserved hypothetical protein, phiE125 gp8 family 1 192 3.8E-56 T 14-10-2018 IPR011738 Phage conserved hypothetical protein PhaeoP54_01569 6f47506accbc322c20799928077523ff 213 SMART SM00072 5 189 1.8E-56 T 14-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit PhaeoP54_01569 6f47506accbc322c20799928077523ff 213 Gene3D G3DSA:3.40.50.300 10 185 1.8E-61 T 14-10-2018 PhaeoP54_01569 6f47506accbc322c20799928077523ff 213 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 6 186 3.9E-66 T 14-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 PhaeoP54_01569 6f47506accbc322c20799928077523ff 213 Hamap MF_00328 Guanylate kinase [gmk]. 4 189 34.321 T 14-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 PhaeoP54_01569 6f47506accbc322c20799928077523ff 213 Pfam PF00625 Guanylate kinase 8 187 9.4E-44 T 14-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit PhaeoP54_01569 6f47506accbc322c20799928077523ff 213 ProSitePatterns PS00856 Guanylate kinase-like signature. 40 57 - T 14-10-2018 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 PhaeoP54_01569 6f47506accbc322c20799928077523ff 213 SUPERFAMILY SSF52540 3 197 3.43E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_01569 6f47506accbc322c20799928077523ff 213 Gene3D G3DSA:3.30.63.10 37 96 1.8E-61 T 14-10-2018 PhaeoP54_01540 abcfe9d23a08a7061bf8bde5d9d2ecb8 421 Pfam PF00171 Aldehyde dehydrogenase family 16 288 2.3E-13 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 PhaeoP54_01540 abcfe9d23a08a7061bf8bde5d9d2ecb8 421 PIRSF PIRSF000151 3 421 2.1E-164 T 14-10-2018 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922 PhaeoP54_01540 abcfe9d23a08a7061bf8bde5d9d2ecb8 421 Gene3D G3DSA:3.40.605.10 23 415 1.9E-150 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 PhaeoP54_01540 abcfe9d23a08a7061bf8bde5d9d2ecb8 421 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 10 420 38.964 T 14-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 PhaeoP54_01540 abcfe9d23a08a7061bf8bde5d9d2ecb8 421 Gene3D G3DSA:3.40.309.10 231 378 1.9E-150 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 PhaeoP54_01540 abcfe9d23a08a7061bf8bde5d9d2ecb8 421 SUPERFAMILY SSF53720 11 420 9.03E-107 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 PhaeoP54_01540 abcfe9d23a08a7061bf8bde5d9d2ecb8 421 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 18 410 3.5E-133 T 14-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 PhaeoP54_00408 ff1e28b8c7896bddbfdad58104415f1e 196 PIRSF PIRSF000709 3 180 4.4E-12 T 14-10-2018 PhaeoP54_00408 ff1e28b8c7896bddbfdad58104415f1e 196 Gene3D G3DSA:3.40.50.1240 2 177 3.9E-41 T 14-10-2018 IPR029033 Histidine phosphatase superfamily PhaeoP54_00408 ff1e28b8c7896bddbfdad58104415f1e 196 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 5 179 7.8E-41 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 PhaeoP54_00408 ff1e28b8c7896bddbfdad58104415f1e 196 SUPERFAMILY SSF53254 3 178 7.5E-43 T 14-10-2018 IPR029033 Histidine phosphatase superfamily PhaeoP54_00408 ff1e28b8c7896bddbfdad58104415f1e 196 SMART SM00855 3 148 2.2E-18 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 PhaeoP54_01114 227a643b31d1142036d1a4730a2fe773 479 Hamap MF_00692 UPF0061 protein YdiU [ydiU]. 3 465 42.656 T 14-10-2018 IPR003846 Uncharacterised protein family UPF0061 PhaeoP54_01114 227a643b31d1142036d1a4730a2fe773 479 Pfam PF02696 Uncharacterized ACR, YdiU/UPF0061 family 4 448 2.4E-106 T 14-10-2018 IPR003846 Uncharacterised protein family UPF0061 PhaeoP54_00837 a572dc1918e0b4d59b055f03cd08a453 303 Gene3D G3DSA:2.60.120.10 17 295 8.6E-99 T 14-10-2018 IPR014710 RmlC-like jelly roll fold PhaeoP54_00837 a572dc1918e0b4d59b055f03cd08a453 303 SUPERFAMILY SSF51182 4 300 6.37E-82 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily PhaeoP54_00837 a572dc1918e0b4d59b055f03cd08a453 303 PIRSF PIRSF006232 2 303 1.6E-93 T 14-10-2018 IPR012093 Pirin Reactome: R-HSA-8935690 PhaeoP54_00837 a572dc1918e0b4d59b055f03cd08a453 303 Pfam PF02678 Pirin 21 121 1.8E-34 T 14-10-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 PhaeoP54_00837 a572dc1918e0b4d59b055f03cd08a453 303 Pfam PF05726 Pirin C-terminal cupin domain 177 299 1.6E-27 T 14-10-2018 IPR008778 Pirin, C-terminal domain Reactome: R-HSA-8935690 PhaeoP54_00837 a572dc1918e0b4d59b055f03cd08a453 303 Gene3D G3DSA:2.60.120.10 144 268 8.6E-99 T 14-10-2018 IPR014710 RmlC-like jelly roll fold PhaeoP54_00642 3e893b38b525de634869f9e69f99e33a 557 Gene3D G3DSA:1.20.210.10 16 557 5.0E-240 T 14-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PhaeoP54_00642 3e893b38b525de634869f9e69f99e33a 557 TIGRFAM TIGR02891 CtaD_CoxA: cytochrome c oxidase, subunit I 21 547 6.8E-203 T 14-10-2018 IPR014241 Cytochrome c oxidase, subunit I bacterial type GO:0004129|GO:0005886|GO:0015990|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 PhaeoP54_00642 3e893b38b525de634869f9e69f99e33a 557 PRINTS PR01165 Cytochrome c oxidase subunit I signature 159 171 6.1E-136 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PhaeoP54_00642 3e893b38b525de634869f9e69f99e33a 557 PRINTS PR01165 Cytochrome c oxidase subunit I signature 452 473 6.1E-136 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PhaeoP54_00642 3e893b38b525de634869f9e69f99e33a 557 PRINTS PR01165 Cytochrome c oxidase subunit I signature 84 107 6.1E-136 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PhaeoP54_00642 3e893b38b525de634869f9e69f99e33a 557 PRINTS PR01165 Cytochrome c oxidase subunit I signature 339 360 6.1E-136 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PhaeoP54_00642 3e893b38b525de634869f9e69f99e33a 557 PRINTS PR01165 Cytochrome c oxidase subunit I signature 315 330 6.1E-136 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PhaeoP54_00642 3e893b38b525de634869f9e69f99e33a 557 PRINTS PR01165 Cytochrome c oxidase subunit I signature 269 290 6.1E-136 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PhaeoP54_00642 3e893b38b525de634869f9e69f99e33a 557 PRINTS PR01165 Cytochrome c oxidase subunit I signature 112 136 6.1E-136 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PhaeoP54_00642 3e893b38b525de634869f9e69f99e33a 557 PRINTS PR01165 Cytochrome c oxidase subunit I signature 189 207 6.1E-136 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PhaeoP54_00642 3e893b38b525de634869f9e69f99e33a 557 PRINTS PR01165 Cytochrome c oxidase subunit I signature 402 421 6.1E-136 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PhaeoP54_00642 3e893b38b525de634869f9e69f99e33a 557 PRINTS PR01165 Cytochrome c oxidase subunit I signature 20 45 6.1E-136 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PhaeoP54_00642 3e893b38b525de634869f9e69f99e33a 557 PRINTS PR01165 Cytochrome c oxidase subunit I signature 374 392 6.1E-136 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PhaeoP54_00642 3e893b38b525de634869f9e69f99e33a 557 PRINTS PR01165 Cytochrome c oxidase subunit I signature 218 237 6.1E-136 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PhaeoP54_00642 3e893b38b525de634869f9e69f99e33a 557 SUPERFAMILY SSF81442 17 548 1.96E-203 T 14-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PhaeoP54_00642 3e893b38b525de634869f9e69f99e33a 557 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 271 325 - T 14-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PhaeoP54_00642 3e893b38b525de634869f9e69f99e33a 557 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 29 494 1.7E-145 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PhaeoP54_00052 009cf29dcee9dc926bada66d6e706ef3 304 Gene3D G3DSA:3.30.70.100 1 94 3.5E-31 T 14-10-2018 PhaeoP54_00052 009cf29dcee9dc926bada66d6e706ef3 304 Gene3D G3DSA:3.40.250.10 95 247 4.1E-47 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily PhaeoP54_00052 009cf29dcee9dc926bada66d6e706ef3 304 Hamap MF_00469 UPF0176 protein YceA [yceA]. 1 252 42.715 T 14-10-2018 IPR020936 Uncharacterised protein family UPF0176 PhaeoP54_00052 009cf29dcee9dc926bada66d6e706ef3 304 SMART SM00450 111 212 1.9E-17 T 14-10-2018 IPR001763 Rhodanese-like domain PhaeoP54_00052 009cf29dcee9dc926bada66d6e706ef3 304 Pfam PF00581 Rhodanese-like domain 113 207 3.6E-6 T 14-10-2018 IPR001763 Rhodanese-like domain PhaeoP54_00052 009cf29dcee9dc926bada66d6e706ef3 304 SUPERFAMILY SSF52821 88 223 4.25E-29 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily PhaeoP54_00735 a55d24667edc41073de1f8249b75bf0c 184 SUPERFAMILY SSF52518 7 166 9.76E-25 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold PhaeoP54_00735 a55d24667edc41073de1f8249b75bf0c 184 TIGRFAM TIGR03846 sulfopy_beta: sulfopyruvate decarboxylase, beta subunit 3 182 1.2E-71 T 14-10-2018 IPR022494 Sulfopyruvate decarboxylase, beta subunit GO:0003824|GO:0030976 KEGG: 00680+4.1.1.79|MetaCyc: PWY-6637|MetaCyc: PWY-6643 PhaeoP54_00735 a55d24667edc41073de1f8249b75bf0c 184 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 39 154 3.2E-19 T 14-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 PhaeoP54_00735 a55d24667edc41073de1f8249b75bf0c 184 Gene3D G3DSA:3.40.50.970 2 171 2.5E-23 T 14-10-2018 PhaeoP54_00624 5c8ca86d4303e7bfc04c0cb7d24c03aa 306 SMART SM00905 28 136 1.1E-24 T 14-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 PhaeoP54_00624 5c8ca86d4303e7bfc04c0cb7d24c03aa 306 SUPERFAMILY SSF55620 24 137 2.95E-22 T 14-10-2018 PhaeoP54_00624 5c8ca86d4303e7bfc04c0cb7d24c03aa 306 TIGRFAM TIGR00526 folB_dom: FolB domain 26 124 1.8E-13 T 14-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 PhaeoP54_00624 5c8ca86d4303e7bfc04c0cb7d24c03aa 306 Gene3D G3DSA:3.30.1130.10 8 142 2.4E-33 T 14-10-2018 PhaeoP54_00624 5c8ca86d4303e7bfc04c0cb7d24c03aa 306 Pfam PF02152 Dihydroneopterin aldolase 28 134 5.8E-18 T 14-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 PhaeoP54_02753 a6378eaff290dbe2212c68bf0671346c 196 Gene3D G3DSA:1.10.10.60 1 65 6.0E-27 T 14-10-2018 PhaeoP54_02753 a6378eaff290dbe2212c68bf0671346c 196 SUPERFAMILY SSF48498 81 192 8.31E-25 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily PhaeoP54_02753 a6378eaff290dbe2212c68bf0671346c 196 SUPERFAMILY SSF46689 3 80 1.18E-15 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PhaeoP54_02753 a6378eaff290dbe2212c68bf0671346c 196 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 57 1.9E-12 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PhaeoP54_02753 a6378eaff290dbe2212c68bf0671346c 196 Gene3D G3DSA:1.10.357.10 67 195 4.4E-28 T 14-10-2018 PhaeoP54_02753 a6378eaff290dbe2212c68bf0671346c 196 ProSitePatterns PS01081 TetR-type HTH domain signature. 24 54 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site PhaeoP54_03705 8e94ff21fe882baa61efff040b9e0fdc 327 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 100 322 2.8E-13 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PhaeoP54_03705 8e94ff21fe882baa61efff040b9e0fdc 327 SUPERFAMILY SSF161098 70 315 6.93E-43 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_03705 8e94ff21fe882baa61efff040b9e0fdc 327 SUPERFAMILY SSF160964 23 63 1.96E-6 T 14-10-2018 PhaeoP54_03705 8e94ff21fe882baa61efff040b9e0fdc 327 Gene3D G3DSA:1.10.3720.10 65 325 3.1E-59 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_02515 6dbd4bb3d46ed030dfbf254d8f236a11 135 Pfam PF00582 Universal stress protein family 1 135 1.4E-22 T 14-10-2018 IPR006016 UspA PhaeoP54_02515 6dbd4bb3d46ed030dfbf254d8f236a11 135 SUPERFAMILY SSF52402 1 135 1.26E-23 T 14-10-2018 PhaeoP54_02515 6dbd4bb3d46ed030dfbf254d8f236a11 135 Gene3D G3DSA:3.40.50.620 1 135 2.3E-25 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PhaeoP54_03372 609c28d1586a566287d4c6c72f1e2f0c 391 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 202 381 5.5E-15 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PhaeoP54_03372 609c28d1586a566287d4c6c72f1e2f0c 391 Gene3D G3DSA:1.10.3720.10 118 388 1.1E-51 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_03372 609c28d1586a566287d4c6c72f1e2f0c 391 SUPERFAMILY SSF161098 122 385 1.01E-55 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_01687 b88f9ed69f0066f0adea5a2cc9c0390b 203 Gene3D G3DSA:1.20.141.10 1 184 8.8E-41 T 14-10-2018 PhaeoP54_01687 b88f9ed69f0066f0adea5a2cc9c0390b 203 Pfam PF09374 Predicted Peptidoglycan domain 99 181 4.2E-21 T 14-10-2018 IPR018537 Peptidoglycan binding domain PhaeoP54_01687 b88f9ed69f0066f0adea5a2cc9c0390b 203 Pfam PF05838 Glycosyl hydrolase 108 9 97 3.2E-24 T 14-10-2018 IPR008565 Protein of unknown function DUF847 PhaeoP54_01687 b88f9ed69f0066f0adea5a2cc9c0390b 203 SUPERFAMILY SSF53955 1 184 1.8E-50 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily PhaeoP54_03285 2bdb8d019e833e8b50add7352c9d9857 448 Pfam PF01523 Putative modulator of DNA gyrase 24 317 1.1E-58 T 14-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 PhaeoP54_03285 2bdb8d019e833e8b50add7352c9d9857 448 Gene3D G3DSA:3.30.2290.10 2 226 1.3E-65 T 14-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal PhaeoP54_03285 2bdb8d019e833e8b50add7352c9d9857 448 SUPERFAMILY SSF111283 3 448 1.57E-124 T 14-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 PhaeoP54_01884 0940d4f092881896414229a802ba8e77 421 SUPERFAMILY SSF54534 195 278 2.29E-14 T 14-10-2018 PhaeoP54_01884 0940d4f092881896414229a802ba8e77 421 Gene3D G3DSA:3.10.50.40 177 282 2.3E-16 T 14-10-2018 PhaeoP54_01884 0940d4f092881896414229a802ba8e77 421 SUPERFAMILY SSF109998 47 205 1.77E-26 T 14-10-2018 IPR027304 Trigger factor/SurA domain superfamily PhaeoP54_01884 0940d4f092881896414229a802ba8e77 421 Pfam PF00639 PPIC-type PPIASE domain 196 274 1.4E-9 T 14-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 PhaeoP54_01884 0940d4f092881896414229a802ba8e77 421 Gene3D G3DSA:1.10.4030.10 48 156 1.2E-10 T 14-10-2018 PhaeoP54_02486 2ac0241fc8f1fe6c84dc4a9139be4348 343 SUPERFAMILY SSF81345 18 338 6.93E-71 T 14-10-2018 IPR037294 ABC transporter, BtuC-like PhaeoP54_02486 2ac0241fc8f1fe6c84dc4a9139be4348 343 Pfam PF01032 FecCD transport family 29 337 9.0E-80 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 PhaeoP54_02486 2ac0241fc8f1fe6c84dc4a9139be4348 343 Gene3D G3DSA:1.10.3470.10 16 341 1.2E-84 T 14-10-2018 IPR037294 ABC transporter, BtuC-like PhaeoP54_00847 0f530d91070104477602d04b6ff80e39 181 Gene3D G3DSA:3.30.70.1520 28 99 1.5E-26 T 14-10-2018 PhaeoP54_00847 0f530d91070104477602d04b6ff80e39 181 SUPERFAMILY SSF103025 90 175 4.91E-7 T 14-10-2018 PhaeoP54_00847 0f530d91070104477602d04b6ff80e39 181 Gene3D G3DSA:3.30.1360.120 22 175 1.5E-26 T 14-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 PhaeoP54_00847 0f530d91070104477602d04b6ff80e39 181 Pfam PF04268 Sarcosine oxidase, gamma subunit family 43 173 1.8E-16 T 14-10-2018 IPR007375 Sarcosine oxidase, gamma subunit KEGG: 00260+1.5.3.1|MetaCyc: PWY-3661|MetaCyc: PWY-4722 PhaeoP54_02837 35ac93aaf132e19a8250aa7d4faa042c 394 SUPERFAMILY SSF53383 1 392 2.12E-100 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PhaeoP54_02837 35ac93aaf132e19a8250aa7d4faa042c 394 Gene3D G3DSA:3.90.1150.10 11 389 7.5E-136 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 PhaeoP54_02837 35ac93aaf132e19a8250aa7d4faa042c 394 PRINTS PR00799 Aspartate aminotransferase signature 270 295 3.1E-29 T 14-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 PhaeoP54_02837 35ac93aaf132e19a8250aa7d4faa042c 394 PRINTS PR00799 Aspartate aminotransferase signature 203 215 3.1E-29 T 14-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 PhaeoP54_02837 35ac93aaf132e19a8250aa7d4faa042c 394 PRINTS PR00799 Aspartate aminotransferase signature 338 356 3.1E-29 T 14-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 PhaeoP54_02837 35ac93aaf132e19a8250aa7d4faa042c 394 PRINTS PR00799 Aspartate aminotransferase signature 172 191 3.1E-29 T 14-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 PhaeoP54_02837 35ac93aaf132e19a8250aa7d4faa042c 394 Pfam PF00155 Aminotransferase class I and II 28 389 1.8E-64 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 PhaeoP54_02837 35ac93aaf132e19a8250aa7d4faa042c 394 Gene3D G3DSA:3.40.640.10 45 312 7.5E-136 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PhaeoP54_02865 c4c4989f799ac88d17575153e8a168a2 366 Gene3D G3DSA:3.30.465.10 44 170 1.6E-30 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 PhaeoP54_02865 c4c4989f799ac88d17575153e8a168a2 366 SUPERFAMILY SSF56176 2 170 1.5E-29 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 PhaeoP54_02865 c4c4989f799ac88d17575153e8a168a2 366 SUPERFAMILY SSF55103 176 366 1.32E-20 T 14-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 PhaeoP54_02865 c4c4989f799ac88d17575153e8a168a2 366 Pfam PF01565 FAD binding domain 2 132 1.3E-14 T 14-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 PhaeoP54_00836 7631d04a73d636119b1bce3b9fc0c14f 205 Gene3D G3DSA:1.10.357.10 4 205 3.9E-55 T 14-10-2018 PhaeoP54_00836 7631d04a73d636119b1bce3b9fc0c14f 205 SUPERFAMILY SSF46689 3 82 4.04E-17 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PhaeoP54_00836 7631d04a73d636119b1bce3b9fc0c14f 205 SUPERFAMILY SSF48498 94 204 5.34E-25 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily PhaeoP54_00836 7631d04a73d636119b1bce3b9fc0c14f 205 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 60 9.7E-15 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PhaeoP54_00836 7631d04a73d636119b1bce3b9fc0c14f 205 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 1.6E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PhaeoP54_00836 7631d04a73d636119b1bce3b9fc0c14f 205 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 1.6E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PhaeoP54_00532 692cc1e17b0e46da0b443a1326db51c0 117 SUPERFAMILY SSF55620 1 116 8.34E-36 T 14-10-2018 PhaeoP54_00532 692cc1e17b0e46da0b443a1326db51c0 117 Gene3D G3DSA:3.30.479.10 1 117 2.9E-35 T 14-10-2018 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily Reactome: R-HSA-1474151 PhaeoP54_00532 692cc1e17b0e46da0b443a1326db51c0 117 PIRSF PIRSF006113 1 117 4.7E-22 T 14-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 PhaeoP54_00532 692cc1e17b0e46da0b443a1326db51c0 117 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 3 116 2.5E-31 T 14-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 PhaeoP54_00532 692cc1e17b0e46da0b443a1326db51c0 117 TIGRFAM TIGR03367 queuosine_QueD: queuosine biosynthesis protein QueD 3 93 2.9E-27 T 14-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 PhaeoP54_01442 95a3e39049774ae8f743e8ede4bd8c52 343 PRINTS PR00111 Alpha/beta hydrolase fold signature 151 164 1.8E-11 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 PhaeoP54_01442 95a3e39049774ae8f743e8ede4bd8c52 343 PRINTS PR00111 Alpha/beta hydrolase fold signature 106 121 1.8E-11 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 PhaeoP54_01442 95a3e39049774ae8f743e8ede4bd8c52 343 PRINTS PR00111 Alpha/beta hydrolase fold signature 165 178 1.8E-11 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 PhaeoP54_01442 95a3e39049774ae8f743e8ede4bd8c52 343 PRINTS PR00111 Alpha/beta hydrolase fold signature 278 292 1.8E-11 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 PhaeoP54_01442 95a3e39049774ae8f743e8ede4bd8c52 343 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 109 120 4.0E-5 T 14-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 PhaeoP54_01442 95a3e39049774ae8f743e8ede4bd8c52 343 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 82 90 4.0E-5 T 14-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 PhaeoP54_01442 95a3e39049774ae8f743e8ede4bd8c52 343 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 151 165 4.0E-5 T 14-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 PhaeoP54_01442 95a3e39049774ae8f743e8ede4bd8c52 343 SUPERFAMILY SSF53474 47 331 3.98E-43 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold PhaeoP54_01442 95a3e39049774ae8f743e8ede4bd8c52 343 Pfam PF00561 alpha/beta hydrolase fold 82 193 4.0E-19 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 PhaeoP54_01442 95a3e39049774ae8f743e8ede4bd8c52 343 Gene3D G3DSA:3.40.50.1820 37 335 2.8E-46 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold PhaeoP54_03970 3c5d267149215c5119b25816d2351f7c 375 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 65 79 - T 14-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 PhaeoP54_03970 3c5d267149215c5119b25816d2351f7c 375 SUPERFAMILY SSF51735 164 337 1.71E-48 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PhaeoP54_03970 3c5d267149215c5119b25816d2351f7c 375 Gene3D G3DSA:3.40.50.720 178 316 9.0E-156 T 14-10-2018 PhaeoP54_03970 3c5d267149215c5119b25816d2351f7c 375 SMART SM00829 14 371 0.0015 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 PhaeoP54_03970 3c5d267149215c5119b25816d2351f7c 375 Gene3D G3DSA:3.90.180.10 10 368 9.0E-156 T 14-10-2018 PhaeoP54_03970 3c5d267149215c5119b25816d2351f7c 375 SUPERFAMILY SSF50129 4 188 6.49E-76 T 14-10-2018 IPR011032 GroES-like superfamily PhaeoP54_03970 3c5d267149215c5119b25816d2351f7c 375 TIGRFAM TIGR02818 adh_III_F_hyde: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 6 373 2.0E-227 T 14-10-2018 IPR014183 Alcohol dehydrogenase class III GO:0006069|GO:0008270|GO:0051903|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00680+1.1.1.284|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-1801|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396|MetaCyc: PWY-7798|Reactome: R-HSA-71384 PhaeoP54_03970 3c5d267149215c5119b25816d2351f7c 375 SUPERFAMILY SSF50129 322 373 1.11E-12 T 14-10-2018 IPR011032 GroES-like superfamily PhaeoP54_03970 3c5d267149215c5119b25816d2351f7c 375 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 32 158 2.4E-25 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 PhaeoP54_03970 3c5d267149215c5119b25816d2351f7c 375 Pfam PF00107 Zinc-binding dehydrogenase 201 329 4.4E-25 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 PhaeoP54_03641 da4bf21066ef8bbe8a5f37b5e1e63c23 337 Gene3D G3DSA:3.60.15.10 21 174 2.8E-16 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like PhaeoP54_03641 da4bf21066ef8bbe8a5f37b5e1e63c23 337 TIGRFAM TIGR04122 Xnuc_lig_assoc: putative exonuclease, DNA ligase-associated 10 335 8.3E-141 T 14-10-2018 IPR026360 Putative exonuclease, DNA ligase-associated PhaeoP54_03641 da4bf21066ef8bbe8a5f37b5e1e63c23 337 SUPERFAMILY SSF56281 11 318 5.08E-57 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like PhaeoP54_03626 852dd4ac37288e38b0706d64c27bc9e7 716 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 512 661 4.1E-43 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 PhaeoP54_03626 852dd4ac37288e38b0706d64c27bc9e7 716 Gene3D G3DSA:1.10.287.950 398 697 2.1E-72 T 14-10-2018 PhaeoP54_03626 852dd4ac37288e38b0706d64c27bc9e7 716 SMART SM00283 449 696 6.4E-76 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 PhaeoP54_03626 852dd4ac37288e38b0706d64c27bc9e7 716 Gene3D G3DSA:3.30.450.20 57 299 3.1E-34 T 14-10-2018 PhaeoP54_03626 852dd4ac37288e38b0706d64c27bc9e7 716 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 576 605 1.0E-42 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 PhaeoP54_03626 852dd4ac37288e38b0706d64c27bc9e7 716 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 547 574 1.0E-42 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 PhaeoP54_03626 852dd4ac37288e38b0706d64c27bc9e7 716 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 470 499 1.0E-42 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 PhaeoP54_03626 852dd4ac37288e38b0706d64c27bc9e7 716 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 624 653 1.0E-42 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 PhaeoP54_03626 852dd4ac37288e38b0706d64c27bc9e7 716 SUPERFAMILY SSF158472 335 382 3.14E-7 T 14-10-2018 PhaeoP54_03626 852dd4ac37288e38b0706d64c27bc9e7 716 SUPERFAMILY SSF58104 418 697 4.45E-60 T 14-10-2018 PhaeoP54_03626 852dd4ac37288e38b0706d64c27bc9e7 716 SMART SM00304 333 386 1.8E-4 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 PhaeoP54_03626 852dd4ac37288e38b0706d64c27bc9e7 716 SMART SM00304 396 448 1.5 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 PhaeoP54_03626 852dd4ac37288e38b0706d64c27bc9e7 716 Pfam PF02743 Cache domain 38 293 1.2E-22 T 14-10-2018 IPR033479 Double Cache domain 1 PhaeoP54_03626 852dd4ac37288e38b0706d64c27bc9e7 716 Gene3D G3DSA:3.30.450.20 64 206 3.1E-34 T 14-10-2018 PhaeoP54_03626 852dd4ac37288e38b0706d64c27bc9e7 716 Gene3D G3DSA:1.20.1480.50 303 391 3.8E-10 T 14-10-2018 PhaeoP54_03520 db7c784523e4729d4e9b18ea2ee2e20a 130 Pfam PF00460 Flagella basal body rod protein 8 38 1.0E-7 T 14-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 PhaeoP54_03520 db7c784523e4729d4e9b18ea2ee2e20a 130 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 82 126 7.3E-11 T 14-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain PhaeoP54_03930 cfc3feb1cd14a4c5d7b9b2ef4efd3abf 210 Gene3D G3DSA:1.10.10.10 141 209 8.4E-9 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_03930 cfc3feb1cd14a4c5d7b9b2ef4efd3abf 210 Gene3D G3DSA:2.60.120.10 3 128 3.8E-16 T 14-10-2018 IPR014710 RmlC-like jelly roll fold PhaeoP54_03930 cfc3feb1cd14a4c5d7b9b2ef4efd3abf 210 Pfam PF00027 Cyclic nucleotide-binding domain 28 108 2.5E-12 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain PhaeoP54_03930 cfc3feb1cd14a4c5d7b9b2ef4efd3abf 210 Pfam PF13545 Crp-like helix-turn-helix domain 147 204 2.4E-6 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 PhaeoP54_03930 cfc3feb1cd14a4c5d7b9b2ef4efd3abf 210 SUPERFAMILY SSF51206 8 135 7.86E-21 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like PhaeoP54_03930 cfc3feb1cd14a4c5d7b9b2ef4efd3abf 210 SUPERFAMILY SSF46785 145 206 6.7E-8 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_03930 cfc3feb1cd14a4c5d7b9b2ef4efd3abf 210 SMART SM00100 9 130 8.7E-7 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain PhaeoP54_01469 9f766776da18830626202b4b96b01103 458 PRINTS PR00335 TrkA potassium uptake protein signature 60 70 4.7E-23 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 PhaeoP54_01469 9f766776da18830626202b4b96b01103 458 PRINTS PR00335 TrkA potassium uptake protein signature 19 33 4.7E-23 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 PhaeoP54_01469 9f766776da18830626202b4b96b01103 458 PRINTS PR00335 TrkA potassium uptake protein signature 2 16 4.7E-23 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 PhaeoP54_01469 9f766776da18830626202b4b96b01103 458 PRINTS PR00335 TrkA potassium uptake protein signature 49 59 4.7E-23 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 PhaeoP54_01469 9f766776da18830626202b4b96b01103 458 PRINTS PR00335 TrkA potassium uptake protein signature 73 87 4.7E-23 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 PhaeoP54_01469 9f766776da18830626202b4b96b01103 458 Pfam PF02254 TrkA-N domain 3 126 2.9E-26 T 14-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 PhaeoP54_01469 9f766776da18830626202b4b96b01103 458 Pfam PF02254 TrkA-N domain 236 354 3.1E-21 T 14-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 PhaeoP54_01469 9f766776da18830626202b4b96b01103 458 SUPERFAMILY SSF116726 364 451 9.81E-15 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 PhaeoP54_01469 9f766776da18830626202b4b96b01103 458 SUPERFAMILY SSF51735 1 149 2.46E-33 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PhaeoP54_01469 9f766776da18830626202b4b96b01103 458 Pfam PF02080 TrkA-C domain 159 227 3.6E-9 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 PhaeoP54_01469 9f766776da18830626202b4b96b01103 458 Pfam PF02080 TrkA-C domain 384 451 4.1E-13 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 PhaeoP54_01469 9f766776da18830626202b4b96b01103 458 Gene3D G3DSA:3.30.70.1450 141 239 1.1E-13 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 PhaeoP54_01469 9f766776da18830626202b4b96b01103 458 Gene3D G3DSA:3.40.50.720 240 370 1.3E-32 T 14-10-2018 PhaeoP54_01469 9f766776da18830626202b4b96b01103 458 Gene3D G3DSA:3.40.50.720 2 139 9.9E-42 T 14-10-2018 PhaeoP54_01469 9f766776da18830626202b4b96b01103 458 SUPERFAMILY SSF116726 137 227 9.94E-14 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 PhaeoP54_01469 9f766776da18830626202b4b96b01103 458 Gene3D G3DSA:3.30.70.1450 371 458 1.3E-18 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 PhaeoP54_01469 9f766776da18830626202b4b96b01103 458 SUPERFAMILY SSF51735 232 379 7.88E-32 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PhaeoP54_03323 220b12a61e990187fca6ed1bbf1e7d91 146 Gene3D G3DSA:3.10.129.10 1 141 1.1E-36 T 14-10-2018 PhaeoP54_03323 220b12a61e990187fca6ed1bbf1e7d91 146 SUPERFAMILY SSF54637 7 142 2.4E-38 T 14-10-2018 IPR029069 HotDog domain superfamily PhaeoP54_03323 220b12a61e990187fca6ed1bbf1e7d91 146 Pfam PF03061 Thioesterase superfamily 48 106 6.5E-9 T 14-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 PhaeoP54_02425 e59d2135c25432dfb0eddbb7d2dce0a4 243 SUPERFAMILY SSF46626 17 227 1.62E-25 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PhaeoP54_02425 e59d2135c25432dfb0eddbb7d2dce0a4 243 Pfam PF02433 Cytochrome C oxidase, mono-heme subunit/FixO 5 231 1.8E-93 T 14-10-2018 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO PhaeoP54_02425 e59d2135c25432dfb0eddbb7d2dce0a4 243 TIGRFAM TIGR00781 ccoO: cytochrome c oxidase, cbb3-type, subunit II 6 237 1.4E-96 T 14-10-2018 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO PhaeoP54_02961 ab907bd34b39fe36ac05989fb9a70aea 284 Pfam PF01380 SIS domain 126 253 1.3E-20 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 PhaeoP54_02961 ab907bd34b39fe36ac05989fb9a70aea 284 Gene3D G3DSA:1.10.10.10 1 77 6.4E-15 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_02961 ab907bd34b39fe36ac05989fb9a70aea 284 Gene3D G3DSA:3.40.50.10490 94 276 5.9E-22 T 14-10-2018 PhaeoP54_02961 ab907bd34b39fe36ac05989fb9a70aea 284 Pfam PF01418 Helix-turn-helix domain, rpiR family 1 76 7.1E-13 T 14-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 PhaeoP54_02961 ab907bd34b39fe36ac05989fb9a70aea 284 SUPERFAMILY SSF46689 1 78 6.27E-16 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PhaeoP54_02961 ab907bd34b39fe36ac05989fb9a70aea 284 SUPERFAMILY SSF53697 98 259 1.2E-11 T 14-10-2018 PhaeoP54_03676 2cdd0b1007dab52a2f2098230aa5ad57 533 Gene3D G3DSA:3.40.190.10 67 509 1.3E-89 T 14-10-2018 PhaeoP54_03676 2cdd0b1007dab52a2f2098230aa5ad57 533 Gene3D G3DSA:3.90.76.10 78 193 1.3E-89 T 14-10-2018 PhaeoP54_03676 2cdd0b1007dab52a2f2098230aa5ad57 533 SUPERFAMILY SSF53850 54 512 2.35E-94 T 14-10-2018 PhaeoP54_03676 2cdd0b1007dab52a2f2098230aa5ad57 533 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 91 432 5.6E-63 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain PhaeoP54_03676 2cdd0b1007dab52a2f2098230aa5ad57 533 PIRSF PIRSF002741 7 521 8.4E-68 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 PhaeoP54_03676 2cdd0b1007dab52a2f2098230aa5ad57 533 Gene3D G3DSA:3.10.105.10 284 498 1.3E-89 T 14-10-2018 PhaeoP54_01582 df6a80fb45144e3102b0fa45364db171 402 SUPERFAMILY SSF53901 209 401 1.9E-65 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 PhaeoP54_01582 df6a80fb45144e3102b0fa45364db171 402 SUPERFAMILY SSF53901 1 244 1.65E-65 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 PhaeoP54_01582 df6a80fb45144e3102b0fa45364db171 402 Gene3D G3DSA:3.40.47.10 1 247 1.2E-73 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 PhaeoP54_01582 df6a80fb45144e3102b0fa45364db171 402 SMART SM00825 Beta-ketoacyl synthase 4 402 1.9E-13 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain PhaeoP54_01582 df6a80fb45144e3102b0fa45364db171 402 Gene3D G3DSA:3.40.47.10 249 391 8.5E-48 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 PhaeoP54_01582 df6a80fb45144e3102b0fa45364db171 402 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 1 239 6.4E-49 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal PhaeoP54_01582 df6a80fb45144e3102b0fa45364db171 402 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 153 169 - T 14-10-2018 IPR018201 Beta-ketoacyl synthase, active site PhaeoP54_01582 df6a80fb45144e3102b0fa45364db171 402 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 248 359 3.7E-33 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal PhaeoP54_01849 d36049f272beaf81bcb53a296f9a0d69 1010 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 173 192 1.5E-5 T 14-10-2018 PhaeoP54_01849 d36049f272beaf81bcb53a296f9a0d69 1010 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 280 298 1.5E-5 T 14-10-2018 PhaeoP54_01849 d36049f272beaf81bcb53a296f9a0d69 1010 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 283 292 8.3E-6 T 14-10-2018 PhaeoP54_01849 d36049f272beaf81bcb53a296f9a0d69 1010 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 172 194 8.3E-6 T 14-10-2018 PhaeoP54_01849 d36049f272beaf81bcb53a296f9a0d69 1010 Gene3D G3DSA:3.10.20.440 10 104 9.4E-7 T 14-10-2018 PhaeoP54_01849 d36049f272beaf81bcb53a296f9a0d69 1010 TIGRFAM TIGR01372 soxA: sarcosine oxidase, alpha subunit family 4 1009 0.0 T 14-10-2018 IPR006277 Sarcosine oxidase, alpha subunit GO:0008115|GO:0046653 KEGG: 00260+1.5.3.1|MetaCyc: PWY-3661|MetaCyc: PWY-4722 PhaeoP54_01849 d36049f272beaf81bcb53a296f9a0d69 1010 SUPERFAMILY SSF51905 172 492 7.13E-34 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PhaeoP54_01849 d36049f272beaf81bcb53a296f9a0d69 1010 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 897 997 5.0E-14 T 14-10-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 PhaeoP54_01849 d36049f272beaf81bcb53a296f9a0d69 1010 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 172 421 3.5E-12 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PhaeoP54_01849 d36049f272beaf81bcb53a296f9a0d69 1010 Gene3D G3DSA:3.50.50.60 172 596 2.5E-93 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PhaeoP54_01849 d36049f272beaf81bcb53a296f9a0d69 1010 SUPERFAMILY SSF101790 909 1008 1.96E-16 T 14-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal PhaeoP54_01849 d36049f272beaf81bcb53a296f9a0d69 1010 Gene3D G3DSA:1.10.10.1100 510 589 2.5E-93 T 14-10-2018 PhaeoP54_01849 d36049f272beaf81bcb53a296f9a0d69 1010 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 16 101 2.1E-23 T 14-10-2018 PhaeoP54_01849 d36049f272beaf81bcb53a296f9a0d69 1010 Pfam PF01571 Aminomethyltransferase folate-binding domain 621 891 1.1E-70 T 14-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain PhaeoP54_01849 d36049f272beaf81bcb53a296f9a0d69 1010 Gene3D G3DSA:3.50.50.60 292 416 2.5E-93 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PhaeoP54_01849 d36049f272beaf81bcb53a296f9a0d69 1010 Gene3D G3DSA:3.30.1360.120 611 1000 1.1E-95 T 14-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 PhaeoP54_01849 d36049f272beaf81bcb53a296f9a0d69 1010 PIRSF PIRSF037980 1 1010 0.0 T 14-10-2018 IPR006277 Sarcosine oxidase, alpha subunit GO:0008115|GO:0046653 KEGG: 00260+1.5.3.1|MetaCyc: PWY-3661|MetaCyc: PWY-4722 PhaeoP54_01849 d36049f272beaf81bcb53a296f9a0d69 1010 SUPERFAMILY SSF103025 615 908 1.88E-92 T 14-10-2018 PhaeoP54_01966 e97dda7de33841e2ee060c844d027186 376 Pfam PF01702 Queuine tRNA-ribosyltransferase 131 364 1.1E-84 T 14-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 PhaeoP54_01966 e97dda7de33841e2ee060c844d027186 376 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 7 366 5.3E-149 T 14-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 PhaeoP54_01966 e97dda7de33841e2ee060c844d027186 376 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 7 366 2.6E-143 T 14-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 PhaeoP54_01966 e97dda7de33841e2ee060c844d027186 376 SUPERFAMILY SSF51713 5 366 3.53E-152 T 14-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 PhaeoP54_01966 e97dda7de33841e2ee060c844d027186 376 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 5 367 54.66 T 14-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 PhaeoP54_01966 e97dda7de33841e2ee060c844d027186 376 Gene3D G3DSA:3.20.20.105 1 371 8.9E-163 T 14-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 PhaeoP54_02933 cdc80d3108228f6a6317411636b273ea 305 PIRSF PIRSF028756 14 305 6.3E-131 T 14-10-2018 IPR016898 Polyphosphate kinase 2 KEGG: 00190+2.7.4.1 PhaeoP54_02933 cdc80d3108228f6a6317411636b273ea 305 TIGRFAM TIGR03707 PPK2_P_aer: polyphosphate kinase 2 51 275 1.6E-109 T 14-10-2018 IPR022486 Polyphosphate kinase 2, PA0141 GO:0006793|GO:0008976 KEGG: 00190+2.7.4.1 PhaeoP54_02933 cdc80d3108228f6a6317411636b273ea 305 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 50 274 5.5E-109 T 14-10-2018 IPR022488 Polyphosphate kinase-2-related PhaeoP54_02933 cdc80d3108228f6a6317411636b273ea 305 Gene3D G3DSA:3.40.50.300 15 289 1.3E-94 T 14-10-2018 PhaeoP54_02933 cdc80d3108228f6a6317411636b273ea 305 SUPERFAMILY SSF52540 81 269 2.18E-29 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_03703 00105fdd4148c7d4c294877763d4a633 287 Gene3D G3DSA:3.40.190.290 89 287 3.6E-28 T 14-10-2018 PhaeoP54_03703 00105fdd4148c7d4c294877763d4a633 287 SUPERFAMILY SSF46785 2 98 3.72E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_03703 00105fdd4148c7d4c294877763d4a633 287 SUPERFAMILY SSF53850 104 284 1.04E-28 T 14-10-2018 PhaeoP54_03703 00105fdd4148c7d4c294877763d4a633 287 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 5.6E-18 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PhaeoP54_03703 00105fdd4148c7d4c294877763d4a633 287 Gene3D G3DSA:1.10.10.10 2 85 4.6E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_03703 00105fdd4148c7d4c294877763d4a633 287 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 1.0E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PhaeoP54_03703 00105fdd4148c7d4c294877763d4a633 287 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 1.0E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PhaeoP54_03703 00105fdd4148c7d4c294877763d4a633 287 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 1.0E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PhaeoP54_03703 00105fdd4148c7d4c294877763d4a633 287 Pfam PF03466 LysR substrate binding domain 106 284 6.2E-28 T 14-10-2018 IPR005119 LysR, substrate-binding PhaeoP54_02119 37e3a8e191ab07a700b8a07cb6ffb2a7 324 Pfam PF11150 Protein of unknown function (DUF2927) 96 313 6.9E-70 T 14-10-2018 IPR021323 Protein of unknown function DUF2927 PhaeoP54_01357 e2cf35aa21de35120784920cea91f589 523 ProSitePatterns PS00455 Putative AMP-binding domain signature. 142 153 - T 14-10-2018 IPR020845 AMP-binding, conserved site PhaeoP54_01357 e2cf35aa21de35120784920cea91f589 523 Pfam PF00501 AMP-binding enzyme 16 402 2.4E-60 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 PhaeoP54_01357 e2cf35aa21de35120784920cea91f589 523 SUPERFAMILY SSF56801 4 500 1.31E-96 T 14-10-2018 PhaeoP54_01357 e2cf35aa21de35120784920cea91f589 523 Gene3D G3DSA:3.30.300.30 398 499 8.7E-16 T 14-10-2018 PhaeoP54_01357 e2cf35aa21de35120784920cea91f589 523 Gene3D G3DSA:3.40.50.12780 5 396 1.6E-82 T 14-10-2018 PhaeoP54_00887 61112c2bd3b098304910a078ba2844ff 179 Pfam PF10649 Protein of unknown function (DUF2478) 4 163 1.3E-52 T 14-10-2018 IPR018912 Protein of unknown function DUF2478 PhaeoP54_03586 c600d541d568d9d66f5aaddd5b9e65b8 250 Gene3D G3DSA:3.40.50.150 31 250 3.0E-79 T 14-10-2018 PhaeoP54_03586 c600d541d568d9d66f5aaddd5b9e65b8 250 SUPERFAMILY SSF53335 16 246 8.83E-50 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PhaeoP54_03586 c600d541d568d9d66f5aaddd5b9e65b8 250 ProSitePatterns PS01184 ubiE/COQ5 methyltransferase family signature 2. 157 171 - T 14-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 PhaeoP54_03586 c600d541d568d9d66f5aaddd5b9e65b8 250 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 16 249 39.097 T 14-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 PhaeoP54_03586 c600d541d568d9d66f5aaddd5b9e65b8 250 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 25 249 5.2E-87 T 14-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 PhaeoP54_03586 c600d541d568d9d66f5aaddd5b9e65b8 250 Pfam PF01209 ubiE/COQ5 methyltransferase family 21 249 3.3E-95 T 14-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 PhaeoP54_03586 c600d541d568d9d66f5aaddd5b9e65b8 250 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 36 51 - T 14-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 PhaeoP54_02256 516a5d337ad0f38d05298ea1baaa7d22 280 Gene3D G3DSA:3.40.50.720 8 259 1.5E-54 T 14-10-2018 PhaeoP54_02256 516a5d337ad0f38d05298ea1baaa7d22 280 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 140 148 9.4E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_02256 516a5d337ad0f38d05298ea1baaa7d22 280 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 160 179 9.4E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_02256 516a5d337ad0f38d05298ea1baaa7d22 280 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 87 98 9.4E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_02256 516a5d337ad0f38d05298ea1baaa7d22 280 Pfam PF00106 short chain dehydrogenase 12 204 1.9E-41 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_02256 516a5d337ad0f38d05298ea1baaa7d22 280 SUPERFAMILY SSF51735 8 232 5.2E-51 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PhaeoP54_02256 516a5d337ad0f38d05298ea1baaa7d22 280 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 147 175 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 PhaeoP54_02256 516a5d337ad0f38d05298ea1baaa7d22 280 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 160 179 2.3E-18 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_02256 516a5d337ad0f38d05298ea1baaa7d22 280 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 2.3E-18 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_02256 516a5d337ad0f38d05298ea1baaa7d22 280 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 87 98 2.3E-18 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_02256 516a5d337ad0f38d05298ea1baaa7d22 280 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 183 200 2.3E-18 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_02256 516a5d337ad0f38d05298ea1baaa7d22 280 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 134 150 2.3E-18 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_01034 db1874cb86554dc2f57143157c450abf 189 SUPERFAMILY SSF54427 45 171 4.91E-20 T 14-10-2018 IPR032710 NTF2-like domain superfamily PhaeoP54_01034 db1874cb86554dc2f57143157c450abf 189 Gene3D G3DSA:3.10.450.50 43 173 7.4E-17 T 14-10-2018 PhaeoP54_01034 db1874cb86554dc2f57143157c450abf 189 Pfam PF07366 SnoaL-like polyketide cyclase 52 169 1.9E-8 T 14-10-2018 IPR009959 Polyketide cyclase SnoaL-like GO:0030638 MetaCyc: PWY-7352|MetaCyc: PWY-7354 PhaeoP54_03407 5934266b51811bb7ebc340dc04e7b465 276 Pfam PF00795 Carbon-nitrogen hydrolase 2 262 6.9E-55 T 14-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 PhaeoP54_03407 5934266b51811bb7ebc340dc04e7b465 276 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 151 171 - T 14-10-2018 IPR001110 Uncharacterised protein family UPF0012, conserved site PhaeoP54_03407 5934266b51811bb7ebc340dc04e7b465 276 SUPERFAMILY SSF56317 1 269 1.26E-79 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily PhaeoP54_03407 5934266b51811bb7ebc340dc04e7b465 276 Gene3D G3DSA:3.60.110.10 1 273 2.8E-88 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily PhaeoP54_03882 8381059428127200134d389c74c7ff17 208 Pfam PF02630 SCO1/SenC 47 182 4.7E-36 T 14-10-2018 IPR003782 Copper chaperone SCO1/SenC Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PhaeoP54_03882 8381059428127200134d389c74c7ff17 208 Gene3D G3DSA:3.40.30.10 43 199 1.1E-48 T 14-10-2018 PhaeoP54_03882 8381059428127200134d389c74c7ff17 208 SUPERFAMILY SSF52833 44 200 3.57E-46 T 14-10-2018 IPR036249 Thioredoxin-like superfamily PhaeoP54_00411 8310bcfa31e9c44db6144844fe2015d1 403 SUPERFAMILY SSF53756 160 369 4.85E-15 T 14-10-2018 PhaeoP54_00411 8310bcfa31e9c44db6144844fe2015d1 403 Gene3D G3DSA:3.40.50.2000 207 375 3.0E-17 T 14-10-2018 PhaeoP54_00411 8310bcfa31e9c44db6144844fe2015d1 403 PIRSF PIRSF017085 4 403 1.1E-153 T 14-10-2018 IPR016683 Glycosyl transferase, family 28, RedA, predicted PhaeoP54_00411 8310bcfa31e9c44db6144844fe2015d1 403 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 270 368 1.3E-4 T 14-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 PhaeoP54_02973 ea71e9b1fa9c9413fb3ef92720ea8985 433 Gene3D G3DSA:1.20.1250.20 4 193 8.2E-12 T 14-10-2018 PhaeoP54_02973 ea71e9b1fa9c9413fb3ef92720ea8985 433 Gene3D G3DSA:1.20.1250.20 198 384 2.1E-18 T 14-10-2018 PhaeoP54_02973 ea71e9b1fa9c9413fb3ef92720ea8985 433 Pfam PF07690 Major Facilitator Superfamily 205 388 2.1E-17 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PhaeoP54_02973 ea71e9b1fa9c9413fb3ef92720ea8985 433 SUPERFAMILY SSF103473 6 383 2.22E-38 T 14-10-2018 IPR036259 MFS transporter superfamily PhaeoP54_01213 f83701acafd1e8b0d476cb8c53af42c7 454 SUPERFAMILY SSF48452 90 292 1.99E-9 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 PhaeoP54_01213 f83701acafd1e8b0d476cb8c53af42c7 454 Gene3D G3DSA:1.25.40.10 89 271 1.3E-9 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 PhaeoP54_03106 ba8c10569dcc2763ca5dddf40879a264 311 Pfam PF00551 Formyl transferase 11 190 2.6E-45 T 14-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 PhaeoP54_03106 ba8c10569dcc2763ca5dddf40879a264 311 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 11 302 6.6E-86 T 14-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 PhaeoP54_03106 ba8c10569dcc2763ca5dddf40879a264 311 SUPERFAMILY SSF53328 11 214 1.7E-65 T 14-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 PhaeoP54_03106 ba8c10569dcc2763ca5dddf40879a264 311 Pfam PF02911 Formyl transferase, C-terminal domain 211 303 1.6E-24 T 14-10-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 PhaeoP54_03106 ba8c10569dcc2763ca5dddf40879a264 311 SUPERFAMILY SSF50486 212 311 2.67E-27 T 14-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 PhaeoP54_03106 ba8c10569dcc2763ca5dddf40879a264 311 Gene3D G3DSA:3.40.50.170 9 213 1.9E-76 T 14-10-2018 PhaeoP54_03106 ba8c10569dcc2763ca5dddf40879a264 311 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 11 306 35.329 T 14-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 PhaeoP54_03106 ba8c10569dcc2763ca5dddf40879a264 311 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 142 165 - T 14-10-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 PhaeoP54_03106 ba8c10569dcc2763ca5dddf40879a264 311 Gene3D G3DSA:3.10.25.10 214 309 2.0E-22 T 14-10-2018 IPR037022 Formyl transferase, C-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 PhaeoP54_03408 5b4385d46f788a73b3d69e1dffb0d64d 85 Gene3D G3DSA:3.40.30.10 1 84 2.3E-28 T 14-10-2018 PhaeoP54_03408 5b4385d46f788a73b3d69e1dffb0d64d 85 TIGRFAM TIGR02181 GRX_bact: glutaredoxin 3 4 83 2.4E-36 T 14-10-2018 IPR011900 Glutaredoxin, GrxC GO:0045454 PhaeoP54_03408 5b4385d46f788a73b3d69e1dffb0d64d 85 Pfam PF00462 Glutaredoxin 4 64 4.2E-22 T 14-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 PhaeoP54_03408 5b4385d46f788a73b3d69e1dffb0d64d 85 SUPERFAMILY SSF52833 1 84 1.94E-29 T 14-10-2018 IPR036249 Thioredoxin-like superfamily PhaeoP54_03408 5b4385d46f788a73b3d69e1dffb0d64d 85 PRINTS PR00160 Glutaredoxin signature 47 60 1.2E-14 T 14-10-2018 IPR014025 Glutaredoxin subgroup PhaeoP54_03408 5b4385d46f788a73b3d69e1dffb0d64d 85 PRINTS PR00160 Glutaredoxin signature 4 22 1.2E-14 T 14-10-2018 IPR014025 Glutaredoxin subgroup PhaeoP54_03408 5b4385d46f788a73b3d69e1dffb0d64d 85 PRINTS PR00160 Glutaredoxin signature 61 74 1.2E-14 T 14-10-2018 IPR014025 Glutaredoxin subgroup PhaeoP54_03168 ee01c170430da5bbe1ea68890a9bae2a 350 TIGRFAM TIGR01186 proV: glycine betaine/L-proline transport ATP binding subunit 42 281 2.4E-102 T 14-10-2018 IPR005892 Glycine betaine transport ATP-binding subunit GO:0005524|GO:0016020|GO:0031460 PhaeoP54_03168 ee01c170430da5bbe1ea68890a9bae2a 350 SMART SM00382 56 245 6.2E-18 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_03168 ee01c170430da5bbe1ea68890a9bae2a 350 Pfam PF00005 ABC transporter 49 195 2.0E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PhaeoP54_03168 ee01c170430da5bbe1ea68890a9bae2a 350 SUPERFAMILY SSF52540 46 272 2.89E-73 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_03168 ee01c170430da5bbe1ea68890a9bae2a 350 ProSitePatterns PS00211 ABC transporters family signature. 168 182 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PhaeoP54_03168 ee01c170430da5bbe1ea68890a9bae2a 350 Gene3D G3DSA:3.40.50.300 26 296 3.5E-75 T 14-10-2018 PhaeoP54_00675 939d1d2a10155553d71eca6edd41dda4 514 PRINTS PR00175 Sodium/alanine symporter signature 256 275 8.4E-48 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 PhaeoP54_00675 939d1d2a10155553d71eca6edd41dda4 514 PRINTS PR00175 Sodium/alanine symporter signature 130 152 8.4E-48 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 PhaeoP54_00675 939d1d2a10155553d71eca6edd41dda4 514 PRINTS PR00175 Sodium/alanine symporter signature 346 364 8.4E-48 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 PhaeoP54_00675 939d1d2a10155553d71eca6edd41dda4 514 PRINTS PR00175 Sodium/alanine symporter signature 228 246 8.4E-48 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 PhaeoP54_00675 939d1d2a10155553d71eca6edd41dda4 514 PRINTS PR00175 Sodium/alanine symporter signature 470 490 8.4E-48 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 PhaeoP54_00675 939d1d2a10155553d71eca6edd41dda4 514 PRINTS PR00175 Sodium/alanine symporter signature 409 431 8.4E-48 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 PhaeoP54_00675 939d1d2a10155553d71eca6edd41dda4 514 Pfam PF01235 Sodium:alanine symporter family 96 510 1.2E-130 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 PhaeoP54_00675 939d1d2a10155553d71eca6edd41dda4 514 TIGRFAM TIGR00835 agcS: amino acid carrier protein 58 501 3.4E-119 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 PhaeoP54_02814 37cf9726a1a2e8650cd8351a5b03e4d9 326 SUPERFAMILY SSF103088 217 323 2.22E-26 T 14-10-2018 IPR036737 OmpA-like domain superfamily PhaeoP54_02814 37cf9726a1a2e8650cd8351a5b03e4d9 326 PRINTS PR01021 OMPA domain signature 252 267 3.2E-8 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 PhaeoP54_02814 37cf9726a1a2e8650cd8351a5b03e4d9 326 PRINTS PR01021 OMPA domain signature 267 283 3.2E-8 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 PhaeoP54_02814 37cf9726a1a2e8650cd8351a5b03e4d9 326 PRINTS PR01021 OMPA domain signature 222 244 3.2E-8 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 PhaeoP54_02814 37cf9726a1a2e8650cd8351a5b03e4d9 326 Pfam PF00691 OmpA family 222 317 1.2E-13 T 14-10-2018 IPR006665 OmpA-like domain PhaeoP54_02814 37cf9726a1a2e8650cd8351a5b03e4d9 326 Gene3D G3DSA:3.30.1330.60 205 326 2.7E-27 T 14-10-2018 IPR036737 OmpA-like domain superfamily PhaeoP54_01710 bddd519e36c7a892a1707eed54cb5a90 426 Gene3D G3DSA:3.40.50.2300 183 320 1.9E-12 T 14-10-2018 PhaeoP54_01710 bddd519e36c7a892a1707eed54cb5a90 426 Gene3D G3DSA:3.40.50.2300 33 182 4.5E-19 T 14-10-2018 PhaeoP54_01710 bddd519e36c7a892a1707eed54cb5a90 426 Pfam PF13458 Periplasmic binding protein 36 376 4.9E-41 T 14-10-2018 IPR028081 Leucine-binding protein domain PhaeoP54_01710 bddd519e36c7a892a1707eed54cb5a90 426 SUPERFAMILY SSF53822 35 393 1.35E-41 T 14-10-2018 IPR028082 Periplasmic binding protein-like I PhaeoP54_00827 3731e65349763060743af21de839176a 596 Pfam PF13687 Domain of unknown function (DUF4153) 154 381 4.1E-15 T 14-10-2018 IPR025291 Protein of unknown function DUF4153 PhaeoP54_01535 0e908f91de2481ddfd017759c9b297f7 197 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 101 2.0E-31 T 14-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PhaeoP54_01535 0e908f91de2481ddfd017759c9b297f7 197 Gene3D G3DSA:1.10.150.20 139 196 1.2E-9 T 14-10-2018 PhaeoP54_01535 0e908f91de2481ddfd017759c9b297f7 197 Pfam PF14520 Helix-hairpin-helix domain 140 178 5.3E-6 T 14-10-2018 PhaeoP54_01535 0e908f91de2481ddfd017759c9b297f7 197 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 101 2.1E-35 T 14-10-2018 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PhaeoP54_01535 0e908f91de2481ddfd017759c9b297f7 197 SUPERFAMILY SSF141091 1 101 7.59E-34 T 14-10-2018 IPR036164 L21-like superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PhaeoP54_01535 0e908f91de2481ddfd017759c9b297f7 197 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 103 25.648 T 14-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PhaeoP54_01535 0e908f91de2481ddfd017759c9b297f7 197 SUPERFAMILY SSF47794 140 181 3.77E-5 T 14-10-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 PhaeoP54_02773 8d14b729770e016cee9371422bc2cefe 440 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 237 274 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PhaeoP54_02773 8d14b729770e016cee9371422bc2cefe 440 PIRSF PIRSF000521 1 374 1.2E-25 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PhaeoP54_02773 8d14b729770e016cee9371422bc2cefe 440 SUPERFAMILY SSF53383 10 437 1.55E-120 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PhaeoP54_02773 8d14b729770e016cee9371422bc2cefe 440 Gene3D G3DSA:3.40.640.10 48 326 3.3E-152 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PhaeoP54_02773 8d14b729770e016cee9371422bc2cefe 440 Gene3D G3DSA:3.90.1150.10 17 435 3.3E-152 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 PhaeoP54_02773 8d14b729770e016cee9371422bc2cefe 440 Pfam PF00202 Aminotransferase class-III 14 435 5.5E-97 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PhaeoP54_00755 50abe7eade70e2278abb76304157417c 363 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PhaeoP54_00755 50abe7eade70e2278abb76304157417c 363 Pfam PF08402 TOBE domain 282 354 6.7E-6 T 14-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 PhaeoP54_00755 50abe7eade70e2278abb76304157417c 363 SUPERFAMILY SSF52540 4 243 2.01E-78 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_00755 50abe7eade70e2278abb76304157417c 363 Gene3D G3DSA:2.40.50.140 289 346 1.6E-32 T 14-10-2018 PhaeoP54_00755 50abe7eade70e2278abb76304157417c 363 SMART SM00382 29 213 5.9E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_00755 50abe7eade70e2278abb76304157417c 363 Gene3D G3DSA:3.40.50.300 3 223 2.7E-62 T 14-10-2018 PhaeoP54_00755 50abe7eade70e2278abb76304157417c 363 SUPERFAMILY SSF50331 238 360 1.48E-25 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal PhaeoP54_00755 50abe7eade70e2278abb76304157417c 363 Gene3D G3DSA:2.40.50.940 224 355 1.6E-32 T 14-10-2018 PhaeoP54_00755 50abe7eade70e2278abb76304157417c 363 Pfam PF00005 ABC transporter 20 162 1.3E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PhaeoP54_02444 8fd7450c8debb18ef4b63b605404af56 476 SMART SM00382 27 213 9.2E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_02444 8fd7450c8debb18ef4b63b605404af56 476 SMART SM00382 283 467 1.7E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_02444 8fd7450c8debb18ef4b63b605404af56 476 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PhaeoP54_02444 8fd7450c8debb18ef4b63b605404af56 476 Gene3D G3DSA:3.40.50.300 3 255 5.0E-52 T 14-10-2018 PhaeoP54_02444 8fd7450c8debb18ef4b63b605404af56 476 Gene3D G3DSA:3.40.50.300 256 475 3.2E-46 T 14-10-2018 PhaeoP54_02444 8fd7450c8debb18ef4b63b605404af56 476 ProSitePatterns PS00211 ABC transporters family signature. 390 404 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PhaeoP54_02444 8fd7450c8debb18ef4b63b605404af56 476 SUPERFAMILY SSF52540 251 470 7.01E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_02444 8fd7450c8debb18ef4b63b605404af56 476 Pfam PF00005 ABC transporter 275 417 1.3E-22 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PhaeoP54_02444 8fd7450c8debb18ef4b63b605404af56 476 Pfam PF00005 ABC transporter 22 164 4.7E-20 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PhaeoP54_02444 8fd7450c8debb18ef4b63b605404af56 476 SUPERFAMILY SSF52540 5 227 5.84E-41 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_00458 498e15020e13d73d42901fc55fa458a3 116 Pfam PF06305 Lipopolysaccharide assembly protein A domain 44 94 3.4E-8 T 14-10-2018 IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 PhaeoP54_02028 75ad9d9497dc67f6bc186d4c6207d8e5 277 PRINTS PR00108 Thymidylate synthase family signature 172 198 2.1E-46 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 PhaeoP54_02028 75ad9d9497dc67f6bc186d4c6207d8e5 277 PRINTS PR00108 Thymidylate synthase family signature 42 63 2.1E-46 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 PhaeoP54_02028 75ad9d9497dc67f6bc186d4c6207d8e5 277 PRINTS PR00108 Thymidylate synthase family signature 128 147 2.1E-46 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 PhaeoP54_02028 75ad9d9497dc67f6bc186d4c6207d8e5 277 PRINTS PR00108 Thymidylate synthase family signature 210 227 2.1E-46 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 PhaeoP54_02028 75ad9d9497dc67f6bc186d4c6207d8e5 277 PRINTS PR00108 Thymidylate synthase family signature 154 169 2.1E-46 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 PhaeoP54_02028 75ad9d9497dc67f6bc186d4c6207d8e5 277 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 84 277 1.1E-81 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 PhaeoP54_02028 75ad9d9497dc67f6bc186d4c6207d8e5 277 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 3 85 4.9E-36 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 PhaeoP54_02028 75ad9d9497dc67f6bc186d4c6207d8e5 277 Gene3D G3DSA:3.30.572.10 1 277 5.8E-122 T 14-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 PhaeoP54_02028 75ad9d9497dc67f6bc186d4c6207d8e5 277 Pfam PF00303 Thymidylate synthase 3 277 9.2E-116 T 14-10-2018 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 PhaeoP54_02028 75ad9d9497dc67f6bc186d4c6207d8e5 277 SUPERFAMILY SSF55831 1 277 2.88E-120 T 14-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 PhaeoP54_02028 75ad9d9497dc67f6bc186d4c6207d8e5 277 Hamap MF_00008 Thymidylate synthase [thyA]. 1 277 38.752 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 PhaeoP54_03945 5843dc619495d9eea84ef9da95cd345d 309 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 124 299 1.7E-15 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PhaeoP54_03945 5843dc619495d9eea84ef9da95cd345d 309 Gene3D G3DSA:1.10.3720.10 24 300 2.7E-51 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_03945 5843dc619495d9eea84ef9da95cd345d 309 SUPERFAMILY SSF161098 31 309 1.96E-59 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_00597 7a1b4715666f4bb83d2b325d1655bf8e 313 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 71 93 - T 14-10-2018 IPR030470 UbiA prenyltransferase conserved site PhaeoP54_00597 7a1b4715666f4bb83d2b325d1655bf8e 313 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 17 304 19.093 T 14-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 PhaeoP54_00597 7a1b4715666f4bb83d2b325d1655bf8e 313 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 20 302 3.0E-98 T 14-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 PhaeoP54_00597 7a1b4715666f4bb83d2b325d1655bf8e 313 Pfam PF01040 UbiA prenyltransferase family 33 285 3.2E-59 T 14-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 PhaeoP54_00597 7a1b4715666f4bb83d2b325d1655bf8e 313 Gene3D G3DSA:1.10.357.140 25 195 6.8E-17 T 14-10-2018 PhaeoP54_00603 b83072e06855e26d2bf65e72877fc638 402 Pfam PF05193 Peptidase M16 inactive domain 149 319 7.9E-36 T 14-10-2018 IPR007863 Peptidase M16, C-terminal PhaeoP54_00603 b83072e06855e26d2bf65e72877fc638 402 SUPERFAMILY SSF63411 204 389 4.5E-46 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 PhaeoP54_00603 b83072e06855e26d2bf65e72877fc638 402 Pfam PF00675 Insulinase (Peptidase family M16) 5 142 2.2E-40 T 14-10-2018 IPR011765 Peptidase M16, N-terminal PhaeoP54_00603 b83072e06855e26d2bf65e72877fc638 402 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 16 39 - T 14-10-2018 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 PhaeoP54_00603 b83072e06855e26d2bf65e72877fc638 402 Gene3D G3DSA:3.30.830.10 1 199 2.2E-67 T 14-10-2018 PhaeoP54_00603 b83072e06855e26d2bf65e72877fc638 402 SUPERFAMILY SSF63411 3 198 2.87E-58 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 PhaeoP54_00603 b83072e06855e26d2bf65e72877fc638 402 Gene3D G3DSA:3.30.830.10 204 395 2.2E-54 T 14-10-2018 PhaeoP54_02243 790a3147ea6578e4786341dea403a57c 170 SUPERFAMILY SSF52540 7 157 7.33E-17 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_02243 790a3147ea6578e4786341dea403a57c 170 Gene3D G3DSA:3.40.50.300 2 169 8.4E-25 T 14-10-2018 PhaeoP54_02243 790a3147ea6578e4786341dea403a57c 170 Pfam PF13671 AAA domain 13 154 1.9E-26 T 14-10-2018 PhaeoP54_02789 30629ab24dcf99d36494b9f196f54a2f 289 SUPERFAMILY SSF88659 74 157 2.43E-11 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like PhaeoP54_02789 30629ab24dcf99d36494b9f196f54a2f 289 SUPERFAMILY SSF54427 170 282 1.3E-11 T 14-10-2018 IPR032710 NTF2-like domain superfamily PhaeoP54_02789 30629ab24dcf99d36494b9f196f54a2f 289 Gene3D G3DSA:1.10.1740.10 2 76 4.2E-9 T 14-10-2018 PhaeoP54_02789 30629ab24dcf99d36494b9f196f54a2f 289 Pfam PF08281 Sigma-70, region 4 102 153 1.4E-12 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PhaeoP54_02789 30629ab24dcf99d36494b9f196f54a2f 289 SUPERFAMILY SSF88946 10 90 3.69E-12 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 PhaeoP54_02789 30629ab24dcf99d36494b9f196f54a2f 289 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 11 155 5.2E-14 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 PhaeoP54_02789 30629ab24dcf99d36494b9f196f54a2f 289 Gene3D G3DSA:1.10.10.10 96 158 3.3E-10 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_02789 30629ab24dcf99d36494b9f196f54a2f 289 Pfam PF04542 Sigma-70 region 2 13 73 5.8E-12 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 PhaeoP54_00186 f104efe5f9626550597fb2af396df1e9 213 Pfam PF00392 Bacterial regulatory proteins, gntR family 6 66 4.4E-18 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PhaeoP54_00186 f104efe5f9626550597fb2af396df1e9 213 Pfam PF07729 FCD domain 76 199 1.0E-24 T 14-10-2018 IPR011711 GntR, C-terminal PhaeoP54_00186 f104efe5f9626550597fb2af396df1e9 213 Gene3D G3DSA:1.10.10.10 2 67 1.1E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_00186 f104efe5f9626550597fb2af396df1e9 213 SMART SM00895 76 200 4.0E-16 T 14-10-2018 IPR011711 GntR, C-terminal PhaeoP54_00186 f104efe5f9626550597fb2af396df1e9 213 SUPERFAMILY SSF46785 5 70 6.87E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_00186 f104efe5f9626550597fb2af396df1e9 213 Gene3D G3DSA:1.20.120.530 70 202 4.1E-28 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal PhaeoP54_00186 f104efe5f9626550597fb2af396df1e9 213 SUPERFAMILY SSF48008 72 206 3.66E-29 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal PhaeoP54_00186 f104efe5f9626550597fb2af396df1e9 213 SMART SM00345 8 66 6.8E-20 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PhaeoP54_01736 253dc48c0bf7f4f29a9363ba5704f9e9 356 Pfam PF02547 Queuosine biosynthesis protein 3 346 1.3E-123 T 14-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 PhaeoP54_01736 253dc48c0bf7f4f29a9363ba5704f9e9 356 SUPERFAMILY SSF111337 1 346 4.97E-124 T 14-10-2018 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 PhaeoP54_01736 253dc48c0bf7f4f29a9363ba5704f9e9 356 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 1 347 43.868 T 14-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 PhaeoP54_01736 253dc48c0bf7f4f29a9363ba5704f9e9 356 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1 346 9.8E-114 T 14-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 PhaeoP54_01736 253dc48c0bf7f4f29a9363ba5704f9e9 356 Gene3D G3DSA:3.40.1780.10 15 345 3.5E-108 T 14-10-2018 PhaeoP54_01736 253dc48c0bf7f4f29a9363ba5704f9e9 356 Gene3D G3DSA:2.40.10.240 62 169 3.5E-108 T 14-10-2018 PhaeoP54_02863 21fc01bae6bb0a83533aaadb1fee5e95 284 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 76 81 - T 14-10-2018 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 PhaeoP54_02863 21fc01bae6bb0a83533aaadb1fee5e95 284 Pfam PF00089 Trypsin 48 182 8.6E-16 T 14-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 PhaeoP54_02863 21fc01bae6bb0a83533aaadb1fee5e95 284 SMART SM00020 43 224 0.0036 T 14-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 PhaeoP54_02863 21fc01bae6bb0a83533aaadb1fee5e95 284 Gene3D G3DSA:2.40.10.10 36 226 3.2E-27 T 14-10-2018 PhaeoP54_02863 21fc01bae6bb0a83533aaadb1fee5e95 284 Gene3D G3DSA:2.40.10.10 48 153 3.2E-27 T 14-10-2018 PhaeoP54_02863 21fc01bae6bb0a83533aaadb1fee5e95 284 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 66 81 2.7E-8 T 14-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 PhaeoP54_02863 21fc01bae6bb0a83533aaadb1fee5e95 284 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 199 211 2.7E-8 T 14-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 PhaeoP54_02863 21fc01bae6bb0a83533aaadb1fee5e95 284 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 132 146 2.7E-8 T 14-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 PhaeoP54_02863 21fc01bae6bb0a83533aaadb1fee5e95 284 SUPERFAMILY SSF50494 37 236 9.56E-30 T 14-10-2018 IPR009003 Peptidase S1, PA clan PhaeoP54_00718 5db82fc7d795ba530025e65e5a4b8280 112 Gene3D G3DSA:3.30.70.20 2 102 9.5E-30 T 14-10-2018 PhaeoP54_00718 5db82fc7d795ba530025e65e5a4b8280 112 Pfam PF11953 Domain of unknown function (DUF3470) 65 105 2.6E-17 T 14-10-2018 IPR022569 Ferredoxin, C-terminal PhaeoP54_00718 5db82fc7d795ba530025e65e5a4b8280 112 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 40 51 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PhaeoP54_00718 5db82fc7d795ba530025e65e5a4b8280 112 Pfam PF00037 4Fe-4S binding domain 34 56 1.3E-7 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PhaeoP54_00718 5db82fc7d795ba530025e65e5a4b8280 112 SUPERFAMILY SSF54862 3 106 5.09E-24 T 14-10-2018 PhaeoP54_00718 5db82fc7d795ba530025e65e5a4b8280 112 PRINTS PR00354 7Fe ferredoxin signature 9 19 9.0E-19 T 14-10-2018 IPR000813 7Fe ferredoxin GO:0009055 PhaeoP54_00718 5db82fc7d795ba530025e65e5a4b8280 112 PRINTS PR00354 7Fe ferredoxin signature 19 29 9.0E-19 T 14-10-2018 IPR000813 7Fe ferredoxin GO:0009055 PhaeoP54_00718 5db82fc7d795ba530025e65e5a4b8280 112 PRINTS PR00354 7Fe ferredoxin signature 35 52 9.0E-19 T 14-10-2018 IPR000813 7Fe ferredoxin GO:0009055 PhaeoP54_00200 3387ed1c249e240698210430f3064d2c 258 Gene3D G3DSA:3.90.550.10 1 254 5.8E-33 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PhaeoP54_00200 3387ed1c249e240698210430f3064d2c 258 SUPERFAMILY SSF53448 5 228 5.63E-40 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PhaeoP54_00200 3387ed1c249e240698210430f3064d2c 258 Pfam PF00535 Glycosyl transferase family 2 6 167 7.5E-24 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 PhaeoP54_00988 01e7985aa5fe7468799f0cabf61bdd57 347 SUPERFAMILY SSF53756 6 343 9.42E-49 T 14-10-2018 PhaeoP54_00988 01e7985aa5fe7468799f0cabf61bdd57 347 Gene3D G3DSA:3.40.50.2000 138 323 2.8E-41 T 14-10-2018 PhaeoP54_00988 01e7985aa5fe7468799f0cabf61bdd57 347 Pfam PF00534 Glycosyl transferases group 1 162 320 1.6E-24 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 PhaeoP54_00988 01e7985aa5fe7468799f0cabf61bdd57 347 Gene3D G3DSA:3.40.50.2000 52 340 2.8E-41 T 14-10-2018 PhaeoP54_03914 b929b66a71d781398b7e4682eda76c35 265 Pfam PF00196 Bacterial regulatory proteins, luxR family 197 249 2.8E-17 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PhaeoP54_03914 b929b66a71d781398b7e4682eda76c35 265 Gene3D G3DSA:1.10.10.10 192 262 6.6E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_03914 b929b66a71d781398b7e4682eda76c35 265 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 198 212 5.4E-9 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PhaeoP54_03914 b929b66a71d781398b7e4682eda76c35 265 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 212 228 5.4E-9 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PhaeoP54_03914 b929b66a71d781398b7e4682eda76c35 265 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 228 240 5.4E-9 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PhaeoP54_03914 b929b66a71d781398b7e4682eda76c35 265 SUPERFAMILY SSF46894 186 251 1.39E-18 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PhaeoP54_03914 b929b66a71d781398b7e4682eda76c35 265 SMART SM00421 195 252 2.9E-18 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PhaeoP54_03914 b929b66a71d781398b7e4682eda76c35 265 Pfam PF03472 Autoinducer binding domain 15 159 2.6E-12 T 14-10-2018 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain PhaeoP54_03914 b929b66a71d781398b7e4682eda76c35 265 SUPERFAMILY SSF75516 6 164 1.7E-17 T 14-10-2018 IPR036693 Transcription factor LuxR-like, autoinducer-binding domain superfamily PhaeoP54_03914 b929b66a71d781398b7e4682eda76c35 265 Gene3D G3DSA:3.30.450.80 4 165 7.1E-11 T 14-10-2018 IPR036693 Transcription factor LuxR-like, autoinducer-binding domain superfamily PhaeoP54_01224 687724520313f6cfa250e8f8092c3c18 109 TIGRFAM TIGR04490 SoxZ_true: thiosulfate oxidation carrier complex protein SoxZ 13 106 7.7E-32 T 14-10-2018 IPR030995 Thiosulfate oxidation carrier complex protein SoxZ PhaeoP54_01224 687724520313f6cfa250e8f8092c3c18 109 Pfam PF08770 Sulphur oxidation protein SoxZ 14 103 3.6E-29 T 14-10-2018 IPR014880 Sulphur oxidation protein SoxZ PhaeoP54_01224 687724520313f6cfa250e8f8092c3c18 109 Gene3D G3DSA:2.60.40.10 2 109 7.8E-43 T 14-10-2018 IPR013783 Immunoglobulin-like fold PhaeoP54_01224 687724520313f6cfa250e8f8092c3c18 109 SUPERFAMILY SSF81296 6 106 6.3E-33 T 14-10-2018 IPR014756 Immunoglobulin E-set PhaeoP54_00179 3babc47526c8a0ca42af4174a2c36517 339 SMART SM00244 21 213 2.1E-14 T 14-10-2018 IPR001107 Band 7 domain PhaeoP54_00179 3babc47526c8a0ca42af4174a2c36517 339 PIRSF PIRSF005651 1 323 4.6E-92 T 14-10-2018 IPR010200 HflC GO:0016021|GO:0052547 PhaeoP54_00179 3babc47526c8a0ca42af4174a2c36517 339 SUPERFAMILY SSF117892 54 218 1.83E-19 T 14-10-2018 IPR036013 Band 7/SPFH domain superfamily PhaeoP54_00179 3babc47526c8a0ca42af4174a2c36517 339 Pfam PF01145 SPFH domain / Band 7 family 25 223 2.6E-25 T 14-10-2018 IPR001107 Band 7 domain PhaeoP54_00179 3babc47526c8a0ca42af4174a2c36517 339 TIGRFAM TIGR01932 hflC: HflC protein 9 315 1.0E-69 T 14-10-2018 IPR010200 HflC GO:0016021|GO:0052547 PhaeoP54_00179 3babc47526c8a0ca42af4174a2c36517 339 Gene3D G3DSA:3.30.479.30 51 214 1.4E-12 T 14-10-2018 PhaeoP54_01289 33b06ea31ac777b1d2f737b51d2f3479 296 Gene3D G3DSA:3.20.20.100 3 296 1.2E-85 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily PhaeoP54_01289 33b06ea31ac777b1d2f737b51d2f3479 296 Pfam PF00248 Aldo/keto reductase family 14 286 5.9E-54 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain PhaeoP54_01289 33b06ea31ac777b1d2f737b51d2f3479 296 SUPERFAMILY SSF51430 4 291 9.17E-71 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily PhaeoP54_00237 b6189e92df8f48aa8f8c34ed8952fb86 329 SUPERFAMILY SSF51735 121 293 5.83E-36 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PhaeoP54_00237 b6189e92df8f48aa8f8c34ed8952fb86 329 SUPERFAMILY SSF50129 1 155 4.72E-26 T 14-10-2018 IPR011032 GroES-like superfamily PhaeoP54_00237 b6189e92df8f48aa8f8c34ed8952fb86 329 Gene3D G3DSA:3.90.180.10 8 322 1.3E-70 T 14-10-2018 PhaeoP54_00237 b6189e92df8f48aa8f8c34ed8952fb86 329 SMART SM00829 10 326 1.3E-9 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 PhaeoP54_00237 b6189e92df8f48aa8f8c34ed8952fb86 329 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 92 2.2E-5 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 PhaeoP54_00237 b6189e92df8f48aa8f8c34ed8952fb86 329 Pfam PF00107 Zinc-binding dehydrogenase 160 273 1.0E-17 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 PhaeoP54_00237 b6189e92df8f48aa8f8c34ed8952fb86 329 Gene3D G3DSA:3.40.50.720 129 296 1.3E-70 T 14-10-2018 PhaeoP54_02993 d05988269d40cdfe428adc44fce0b187 440 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 248 390 8.2E-17 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PhaeoP54_02993 d05988269d40cdfe428adc44fce0b187 440 Gene3D G3DSA:1.10.3720.10 220 438 2.0E-41 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_02993 d05988269d40cdfe428adc44fce0b187 440 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 232 326 1.6E-15 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 PhaeoP54_02993 d05988269d40cdfe428adc44fce0b187 440 SUPERFAMILY SSF161098 230 421 1.31E-33 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_02455 a43fac80223e3154da6d54975b4a3236 505 Pfam PF01593 Flavin containing amine oxidoreductase 14 494 2.5E-17 T 14-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 PhaeoP54_02455 a43fac80223e3154da6d54975b4a3236 505 Gene3D G3DSA:3.50.50.60 4 97 7.6E-15 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PhaeoP54_02455 a43fac80223e3154da6d54975b4a3236 505 SUPERFAMILY SSF51905 1 497 9.48E-51 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PhaeoP54_02455 a43fac80223e3154da6d54975b4a3236 505 Gene3D G3DSA:3.50.50.60 205 318 7.3E-15 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PhaeoP54_00873 2e5044c9aaf78168c3a667438ea0fff8 265 Gene3D G3DSA:3.40.1190.20 1 265 1.0E-61 T 14-10-2018 IPR029056 Ribokinase-like PhaeoP54_00873 2e5044c9aaf78168c3a667438ea0fff8 265 Pfam PF08543 Phosphomethylpyrimidine kinase 11 263 1.3E-49 T 14-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 PhaeoP54_00873 2e5044c9aaf78168c3a667438ea0fff8 265 SUPERFAMILY SSF53613 2 262 1.8E-44 T 14-10-2018 IPR029056 Ribokinase-like PhaeoP54_00088 1332dd3711006c402db9ce9038d9f768 250 SUPERFAMILY SSF51658 1 249 7.46E-67 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily PhaeoP54_00088 1332dd3711006c402db9ce9038d9f768 250 PIRSF PIRSF006241 1 250 5.1E-75 T 14-10-2018 IPR026040 Hydroxypyruvate isomerase-like PhaeoP54_00088 1332dd3711006c402db9ce9038d9f768 250 Gene3D G3DSA:3.20.20.150 1 250 6.2E-67 T 14-10-2018 PhaeoP54_00088 1332dd3711006c402db9ce9038d9f768 250 Pfam PF01261 Xylose isomerase-like TIM barrel 21 211 3.2E-25 T 14-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain PhaeoP54_00680 b2f11d806efa42463467c0435efc3e65 436 Pfam PF05694 56kDa selenium binding protein (SBP56) 26 428 1.9E-45 T 14-10-2018 IPR008826 Selenium-binding protein GO:0008430 PhaeoP54_00680 b2f11d806efa42463467c0435efc3e65 436 SUPERFAMILY SSF50969 72 411 1.8E-14 T 14-10-2018 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like PhaeoP54_01204 f08cd3557da35181f23156a95fa9f5e7 165 PIRSF PIRSF019239 4 165 2.5E-45 T 14-10-2018 IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 PhaeoP54_01204 f08cd3557da35181f23156a95fa9f5e7 165 Pfam PF01899 Na+/H+ ion antiporter subunit 15 163 7.4E-45 T 14-10-2018 IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 PhaeoP54_01616 d80ea9b77a3c6a3c32abcdc107a45b46 492 Gene3D G3DSA:1.10.3210.10 293 478 3.1E-57 T 14-10-2018 PhaeoP54_01616 d80ea9b77a3c6a3c32abcdc107a45b46 492 SUPERFAMILY SSF109604 302 474 2.16E-34 T 14-10-2018 PhaeoP54_01616 d80ea9b77a3c6a3c32abcdc107a45b46 492 Pfam PF01966 HD domain 314 436 3.1E-18 T 14-10-2018 IPR006674 HD domain PhaeoP54_01616 d80ea9b77a3c6a3c32abcdc107a45b46 492 TIGRFAM TIGR00277 HDIG: HDIG domain 314 404 2.1E-9 T 14-10-2018 IPR006675 HDIG domain PhaeoP54_01616 d80ea9b77a3c6a3c32abcdc107a45b46 492 Pfam PF13487 HD domain 166 218 4.6E-9 T 14-10-2018 PhaeoP54_01616 d80ea9b77a3c6a3c32abcdc107a45b46 492 SUPERFAMILY SSF109604 49 261 1.44E-8 T 14-10-2018 PhaeoP54_01616 d80ea9b77a3c6a3c32abcdc107a45b46 492 SMART SM00471 310 445 1.6E-12 T 14-10-2018 IPR003607 HD/PDEase domain PhaeoP54_00942 4f31eb2aa880d980bc4d73ad04796d97 548 PIRSF PIRSF003128 1 548 3.1E-151 T 14-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 PhaeoP54_00942 4f31eb2aa880d980bc4d73ad04796d97 548 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 546 3.3E-143 T 14-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 PhaeoP54_00942 4f31eb2aa880d980bc4d73ad04796d97 548 SUPERFAMILY SSF52540 1 216 2.66E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_00942 4f31eb2aa880d980bc4d73ad04796d97 548 Gene3D G3DSA:3.40.50.300 1 273 1.8E-39 T 14-10-2018 PhaeoP54_00942 4f31eb2aa880d980bc4d73ad04796d97 548 Gene3D G3DSA:3.40.50.300 283 548 7.3E-51 T 14-10-2018 PhaeoP54_00942 4f31eb2aa880d980bc4d73ad04796d97 548 Pfam PF02463 RecF/RecN/SMC N terminal domain 14 502 2.4E-14 T 14-10-2018 IPR003395 RecF/RecN/SMC, N-terminal PhaeoP54_00942 4f31eb2aa880d980bc4d73ad04796d97 548 SUPERFAMILY SSF52540 6 500 7.79E-27 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_00828 1fc85d943f39857b4e9fabfe8e65e0bc 195 SUPERFAMILY SSF111126 1 172 1.94E-22 T 14-10-2018 IPR024096 NO signalling/Golgi transport ligand-binding domain superfamily PhaeoP54_00828 1fc85d943f39857b4e9fabfe8e65e0bc 195 Pfam PF07700 Haem-NO-binding 2 155 4.5E-23 T 14-10-2018 IPR011644 Heme NO-binding GO:0020037 KEGG: 00230+4.6.1.2|Reactome: R-HSA-392154 PhaeoP54_00828 1fc85d943f39857b4e9fabfe8e65e0bc 195 Gene3D G3DSA:3.90.1520.10 1 184 1.9E-36 T 14-10-2018 IPR038158 H-NOX domain superfamily GO:0020037 KEGG: 00230+4.6.1.2|Reactome: R-HSA-392154 PhaeoP54_02062 a8fdc2084f7d0480223987f5b32288c8 174 SUPERFAMILY SSF55729 1 160 3.14E-32 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase PhaeoP54_02062 a8fdc2084f7d0480223987f5b32288c8 174 Gene3D G3DSA:3.40.630.30 1 163 5.6E-46 T 14-10-2018 PhaeoP54_02062 a8fdc2084f7d0480223987f5b32288c8 174 Pfam PF13420 Acetyltransferase (GNAT) domain 3 152 7.7E-20 T 14-10-2018 PhaeoP54_03445 e32ff6b0dd078886aeeef51f332aff8e 269 SUPERFAMILY SSF52540 10 265 4.7E-67 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_03445 e32ff6b0dd078886aeeef51f332aff8e 269 Gene3D G3DSA:3.40.50.300 6 268 1.4E-79 T 14-10-2018 PhaeoP54_03445 e32ff6b0dd078886aeeef51f332aff8e 269 Pfam PF13614 AAA domain 11 189 1.5E-61 T 14-10-2018 IPR025669 AAA domain PhaeoP54_00464 6d056717b0da315ad621a50175735468 209 SUPERFAMILY SSF50715 6 195 6.8E-53 T 14-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 PhaeoP54_00464 6d056717b0da315ad621a50175735468 209 Pfam PF01386 Ribosomal L25p family 8 96 7.3E-22 T 14-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 PhaeoP54_00464 6d056717b0da315ad621a50175735468 209 Pfam PF14693 Ribosomal protein TL5, C-terminal domain 104 188 6.6E-25 T 14-10-2018 IPR020057 Ribosomal protein L25, beta domain PhaeoP54_00464 6d056717b0da315ad621a50175735468 209 TIGRFAM TIGR00731 bL25_bact_ctc: ribosomal protein bL25, Ctc-form 8 186 2.5E-41 T 14-10-2018 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 PhaeoP54_00464 6d056717b0da315ad621a50175735468 209 Hamap MF_01334 50S ribosomal protein L25 [rplY]. 6 189 26.296 T 14-10-2018 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 PhaeoP54_00464 6d056717b0da315ad621a50175735468 209 Gene3D G3DSA:2.40.240.10 5 99 9.4E-24 T 14-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 PhaeoP54_00464 6d056717b0da315ad621a50175735468 209 Gene3D G3DSA:2.170.120.20 102 195 2.6E-21 T 14-10-2018 IPR037121 Ribosomal protein L25, C-terminal PhaeoP54_00464 6d056717b0da315ad621a50175735468 209 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 10 99 1.0E-34 T 14-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 PhaeoP54_00987 a1f526ad634e65ca2934477d9f0ac4a6 387 Gene3D G3DSA:3.30.70.360 184 299 1.0E-134 T 14-10-2018 PhaeoP54_00987 a1f526ad634e65ca2934477d9f0ac4a6 387 Gene3D G3DSA:3.40.630.10 15 369 1.0E-134 T 14-10-2018 PhaeoP54_00987 a1f526ad634e65ca2934477d9f0ac4a6 387 SUPERFAMILY SSF55031 187 295 5.76E-28 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain PhaeoP54_00987 a1f526ad634e65ca2934477d9f0ac4a6 387 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 15 372 4.5E-104 T 14-10-2018 IPR017439 Amidohydrolase GO:0016787 PhaeoP54_00987 a1f526ad634e65ca2934477d9f0ac4a6 387 SUPERFAMILY SSF53187 2 383 1.2E-87 T 14-10-2018 PhaeoP54_00987 a1f526ad634e65ca2934477d9f0ac4a6 387 PIRSF PIRSF005962 2 386 2.1E-126 T 14-10-2018 IPR017439 Amidohydrolase GO:0016787 PhaeoP54_00987 a1f526ad634e65ca2934477d9f0ac4a6 387 Pfam PF01546 Peptidase family M20/M25/M40 76 381 9.7E-38 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 PhaeoP54_00987 a1f526ad634e65ca2934477d9f0ac4a6 387 Pfam PF07687 Peptidase dimerisation domain 189 283 3.0E-8 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain PhaeoP54_02523 62142b2111714d969f3a6c72267873e5 494 Gene3D G3DSA:3.50.80.20 105 223 6.7E-14 T 14-10-2018 PhaeoP54_02523 62142b2111714d969f3a6c72267873e5 494 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 81 100 4.3E-16 T 14-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 PhaeoP54_02523 62142b2111714d969f3a6c72267873e5 494 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 357 371 4.3E-16 T 14-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 PhaeoP54_02523 62142b2111714d969f3a6c72267873e5 494 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 429 442 4.3E-16 T 14-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 PhaeoP54_02523 62142b2111714d969f3a6c72267873e5 494 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 372 386 4.3E-16 T 14-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 PhaeoP54_02523 62142b2111714d969f3a6c72267873e5 494 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 300 322 4.3E-16 T 14-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 PhaeoP54_02523 62142b2111714d969f3a6c72267873e5 494 SUPERFAMILY SSF56601 57 461 1.52E-81 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like PhaeoP54_02523 62142b2111714d969f3a6c72267873e5 494 Gene3D G3DSA:3.40.710.10 270 479 5.6E-42 T 14-10-2018 PhaeoP54_02523 62142b2111714d969f3a6c72267873e5 494 Pfam PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family 55 456 4.0E-60 T 14-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 PhaeoP54_02523 62142b2111714d969f3a6c72267873e5 494 TIGRFAM TIGR00666 PBP4: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 82 450 1.7E-52 T 14-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 PhaeoP54_01168 2e02d7485c0b6d364bf192e26d699e03 432 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 15 430 52.365 T 14-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 PhaeoP54_01168 2e02d7485c0b6d364bf192e26d699e03 432 Gene3D G3DSA:3.40.640.10 45 296 1.2E-181 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PhaeoP54_01168 2e02d7485c0b6d364bf192e26d699e03 432 SUPERFAMILY SSF53383 11 430 1.95E-183 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PhaeoP54_01168 2e02d7485c0b6d364bf192e26d699e03 432 PIRSF PIRSF000412 4 432 3.1E-170 T 14-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 PhaeoP54_01168 2e02d7485c0b6d364bf192e26d699e03 432 Gene3D G3DSA:3.90.1150.10 18 401 1.2E-181 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 PhaeoP54_01168 2e02d7485c0b6d364bf192e26d699e03 432 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 230 246 - T 14-10-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 PhaeoP54_01168 2e02d7485c0b6d364bf192e26d699e03 432 Pfam PF00464 Serine hydroxymethyltransferase 16 393 1.6E-176 T 14-10-2018 IPR039429 Serine hydroxymethyltransferase-like domain KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 PhaeoP54_00183 54953ecb30c519f883bcd43208bae96e 1206 Gene3D G3DSA:1.10.510.10 30 213 1.9E-13 T 14-10-2018 PhaeoP54_00183 54953ecb30c519f883bcd43208bae96e 1206 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 53 77 - T 14-10-2018 IPR017441 Protein kinase, ATP binding site GO:0005524 PhaeoP54_00183 54953ecb30c519f883bcd43208bae96e 1206 SUPERFAMILY SSF56112 39 190 4.51E-16 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily PhaeoP54_00183 54953ecb30c519f883bcd43208bae96e 1206 SMART SM00220 47 292 2.1E-4 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 PhaeoP54_00183 54953ecb30c519f883bcd43208bae96e 1206 Pfam PF00069 Protein kinase domain 47 189 1.2E-6 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 PhaeoP54_02452 0cd195fdd989c3c4b424b9e472daf443 79 SUPERFAMILY SSF46689 1 79 1.22E-6 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PhaeoP54_02452 0cd195fdd989c3c4b424b9e472daf443 79 Pfam PF01527 Transposase 6 70 9.0E-6 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 PhaeoP54_03633 d7f682a641dfe5305b5f472a250603ea 341 SUPERFAMILY SSF53822 22 315 3.7E-68 T 14-10-2018 IPR028082 Periplasmic binding protein-like I PhaeoP54_03633 d7f682a641dfe5305b5f472a250603ea 341 TIGRFAM TIGR02634 xylF: D-xylose ABC transporter, D-xylose-binding protein 26 329 5.9E-145 T 14-10-2018 IPR013456 D-xylose ABC transporter, substrate-binding protein GO:0015753|GO:0048029 PhaeoP54_03633 d7f682a641dfe5305b5f472a250603ea 341 Gene3D G3DSA:3.40.50.2300 27 305 6.9E-94 T 14-10-2018 PhaeoP54_03633 d7f682a641dfe5305b5f472a250603ea 341 Gene3D G3DSA:3.40.50.2300 126 316 6.9E-94 T 14-10-2018 PhaeoP54_03633 d7f682a641dfe5305b5f472a250603ea 341 Pfam PF13407 Periplasmic binding protein domain 26 280 2.5E-62 T 14-10-2018 IPR025997 Periplasmic binding protein PhaeoP54_04021 fd09e3b9cacfb72c3a14741093228529 116 PIRSF PIRSF002070 1 116 4.6E-12 T 14-10-2018 PhaeoP54_04021 fd09e3b9cacfb72c3a14741093228529 116 Pfam PF00436 Single-strand binding protein family 7 100 1.5E-11 T 14-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 PhaeoP54_04021 fd09e3b9cacfb72c3a14741093228529 116 Gene3D G3DSA:2.40.50.140 1 109 5.4E-15 T 14-10-2018 PhaeoP54_04021 fd09e3b9cacfb72c3a14741093228529 116 SUPERFAMILY SSF50249 3 100 2.2E-14 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold PhaeoP54_01610 dcc7b64e88e3fc48e057ac08a3be8c2b 356 ProSitePatterns PS00869 Renal dipeptidase active site. 130 152 - T 14-10-2018 IPR000180 Membrane dipeptidase, active site GO:0006508|GO:0008235|GO:0008239|GO:0016805 MetaCyc: PWY-7533|Reactome: R-HSA-2142691|Reactome: R-HSA-5423646 PhaeoP54_01610 dcc7b64e88e3fc48e057ac08a3be8c2b 356 Gene3D G3DSA:3.20.20.140 2 354 7.0E-117 T 14-10-2018 PhaeoP54_01610 dcc7b64e88e3fc48e057ac08a3be8c2b 356 Pfam PF01244 Membrane dipeptidase (Peptidase family M19) 5 344 6.6E-97 T 14-10-2018 IPR008257 Peptidase M19 GO:0006508|GO:0016805 MetaCyc: PWY-7533|Reactome: R-HSA-2142691|Reactome: R-HSA-5423646 PhaeoP54_01610 dcc7b64e88e3fc48e057ac08a3be8c2b 356 SUPERFAMILY SSF51556 2 348 1.7E-86 T 14-10-2018 IPR032466 Metal-dependent hydrolase PhaeoP54_02166 b634a4f384434fd854af90078145b034 132 Pfam PF01844 HNH endonuclease 73 121 8.8E-12 T 14-10-2018 IPR002711 HNH endonuclease GO:0003676|GO:0004519 PhaeoP54_02166 b634a4f384434fd854af90078145b034 132 SMART SM00507 62 116 3.8E-9 T 14-10-2018 IPR003615 HNH nuclease PhaeoP54_02667 2936d287f5b017138e7effd3953c9401 197 Gene3D G3DSA:3.30.70.20 6 168 7.9E-35 T 14-10-2018 PhaeoP54_02667 2936d287f5b017138e7effd3953c9401 197 SUPERFAMILY SSF54862 1 180 2.93E-49 T 14-10-2018 PhaeoP54_02667 2936d287f5b017138e7effd3953c9401 197 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 87 98 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PhaeoP54_02667 2936d287f5b017138e7effd3953c9401 197 Gene3D G3DSA:3.30.70.20 61 118 7.9E-35 T 14-10-2018 PhaeoP54_02667 2936d287f5b017138e7effd3953c9401 197 Pfam PF13247 4Fe-4S dicluster domain 52 124 5.6E-10 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PhaeoP54_02667 2936d287f5b017138e7effd3953c9401 197 PRINTS PR00354 7Fe ferredoxin signature 55 65 8.6E-6 T 14-10-2018 IPR000813 7Fe ferredoxin GO:0009055 PhaeoP54_02667 2936d287f5b017138e7effd3953c9401 197 PRINTS PR00354 7Fe ferredoxin signature 65 75 8.6E-6 T 14-10-2018 IPR000813 7Fe ferredoxin GO:0009055 PhaeoP54_02667 2936d287f5b017138e7effd3953c9401 197 PRINTS PR00354 7Fe ferredoxin signature 82 99 8.6E-6 T 14-10-2018 IPR000813 7Fe ferredoxin GO:0009055 PhaeoP54_03737 c83b9f8b88a93e55c9708e196936b1cd 150 Gene3D G3DSA:1.10.760.10 1 150 2.4E-37 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PhaeoP54_03737 c83b9f8b88a93e55c9708e196936b1cd 150 Pfam PF00034 Cytochrome c 51 134 8.0E-7 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PhaeoP54_03737 c83b9f8b88a93e55c9708e196936b1cd 150 SUPERFAMILY SSF46626 34 149 8.92E-17 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PhaeoP54_02890 23bc646aacad02ef78ce0fce11b24097 279 SUPERFAMILY SSF51445 72 278 1.19E-65 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily PhaeoP54_02890 23bc646aacad02ef78ce0fce11b24097 279 Gene3D G3DSA:3.20.20.80 66 277 1.2E-67 T 14-10-2018 PhaeoP54_02890 23bc646aacad02ef78ce0fce11b24097 279 SMART SM00641 75 179 1.8E-21 T 14-10-2018 IPR018077 Glycoside hydrolase, family 25 subgroup PhaeoP54_02890 23bc646aacad02ef78ce0fce11b24097 279 Pfam PF01183 Glycosyl hydrolases family 25 78 256 1.5E-53 T 14-10-2018 IPR002053 Glycoside hydrolase, family 25 GO:0003796|GO:0009253|GO:0016998 PhaeoP54_02890 23bc646aacad02ef78ce0fce11b24097 279 ProSitePatterns PS00953 Glycosyl hydrolases family 25 active sites signature. 79 112 - T 14-10-2018 IPR008270 Glycoside hydrolase, family 25, active site GO:0003796|GO:0009253|GO:0016998 PhaeoP54_01823 4fc85d4ee3c123a07ffb67a9dd598e37 243 TIGRFAM TIGR01191 ccmC: heme exporter protein CcmC 43 227 4.1E-78 T 14-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 PhaeoP54_01823 4fc85d4ee3c123a07ffb67a9dd598e37 243 Pfam PF01578 Cytochrome C assembly protein 13 183 1.6E-30 T 14-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 PhaeoP54_01823 4fc85d4ee3c123a07ffb67a9dd598e37 243 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 154 180 7.7E-54 T 14-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 PhaeoP54_01823 4fc85d4ee3c123a07ffb67a9dd598e37 243 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 119 139 7.7E-54 T 14-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 PhaeoP54_01823 4fc85d4ee3c123a07ffb67a9dd598e37 243 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 98 118 7.7E-54 T 14-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 PhaeoP54_01823 4fc85d4ee3c123a07ffb67a9dd598e37 243 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 43 60 7.7E-54 T 14-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 PhaeoP54_01823 4fc85d4ee3c123a07ffb67a9dd598e37 243 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 60 80 7.7E-54 T 14-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 PhaeoP54_01823 4fc85d4ee3c123a07ffb67a9dd598e37 243 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 203 227 7.7E-54 T 14-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 PhaeoP54_01822 6644ed30b76a7471161a55061369cca8 57 TIGRFAM TIGR03141 cytochro_ccmD: heme exporter protein CcmD 4 47 3.9E-12 T 14-10-2018 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 PhaeoP54_01822 6644ed30b76a7471161a55061369cca8 57 Pfam PF04995 Heme exporter protein D (CcmD) 6 49 6.9E-14 T 14-10-2018 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 PhaeoP54_01541 16c4901301d13874af2bc94b87528024 198 Gene3D G3DSA:3.30.565.10 73 197 3.8E-25 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PhaeoP54_01541 16c4901301d13874af2bc94b87528024 198 Gene3D G3DSA:1.10.287.130 1 72 3.7E-30 T 14-10-2018 PhaeoP54_01541 16c4901301d13874af2bc94b87528024 198 Pfam PF10090 Histidine phosphotransferase C-terminal domain 77 191 1.1E-28 T 14-10-2018 IPR018762 Histidine phosphotransferase ChpT, C-terminal PhaeoP54_01782 85b3d95523e4aee7540cea5b8887baf3 384 Gene3D G3DSA:3.30.160.60 346 384 1.7E-16 T 14-10-2018 PhaeoP54_01782 85b3d95523e4aee7540cea5b8887baf3 384 Gene3D G3DSA:1.10.8.1150 38 110 2.1E-12 T 14-10-2018 PhaeoP54_01782 85b3d95523e4aee7540cea5b8887baf3 384 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 10 374 4.8E-70 T 14-10-2018 IPR003770 Endolytic murein transglycosylase PhaeoP54_01782 85b3d95523e4aee7540cea5b8887baf3 384 Hamap MF_02065 Endolytic murein transglycosylase [mltG]. 10 376 31.539 T 14-10-2018 IPR003770 Endolytic murein transglycosylase PhaeoP54_01782 85b3d95523e4aee7540cea5b8887baf3 384 Pfam PF02618 YceG-like family 44 373 7.2E-81 T 14-10-2018 IPR003770 Endolytic murein transglycosylase PhaeoP54_02440 0cbf71a009435d7581b5ee596bac2758 341 Gene3D G3DSA:3.90.1150.10 247 340 1.8E-16 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 PhaeoP54_02440 0cbf71a009435d7581b5ee596bac2758 341 Gene3D G3DSA:3.40.640.10 4 246 1.0E-78 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PhaeoP54_02440 0cbf71a009435d7581b5ee596bac2758 341 PIRSF PIRSF017617 1 341 1.1E-110 T 14-10-2018 IPR023603 Threonine aldolase PhaeoP54_02440 0cbf71a009435d7581b5ee596bac2758 341 Pfam PF01212 Beta-eliminating lyase 4 285 1.8E-79 T 14-10-2018 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 PhaeoP54_02440 0cbf71a009435d7581b5ee596bac2758 341 SUPERFAMILY SSF53383 1 339 5.3E-101 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PhaeoP54_02308 238eb637f609461a91b6ca2b0b6d1717 278 Pfam PF01061 ABC-2 type transporter 31 239 5.5E-30 T 14-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 PhaeoP54_02308 238eb637f609461a91b6ca2b0b6d1717 278 PIRSF PIRSF006648 1 275 2.3E-24 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 PhaeoP54_02308 238eb637f609461a91b6ca2b0b6d1717 278 PRINTS PR00164 ABC-2 type transport system membrane protein signature 80 102 5.3E-11 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 PhaeoP54_02308 238eb637f609461a91b6ca2b0b6d1717 278 PRINTS PR00164 ABC-2 type transport system membrane protein signature 161 185 5.3E-11 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 PhaeoP54_02308 238eb637f609461a91b6ca2b0b6d1717 278 PRINTS PR00164 ABC-2 type transport system membrane protein signature 124 149 5.3E-11 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 PhaeoP54_02308 238eb637f609461a91b6ca2b0b6d1717 278 PRINTS PR00164 ABC-2 type transport system membrane protein signature 198 217 5.3E-11 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 PhaeoP54_00745 f5a3311533813edd58985213d0c16fea 341 SUPERFAMILY SSF47413 7 65 1.5E-17 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 PhaeoP54_00745 f5a3311533813edd58985213d0c16fea 341 Gene3D G3DSA:1.10.260.40 2 65 1.5E-23 T 14-10-2018 PhaeoP54_00745 f5a3311533813edd58985213d0c16fea 341 SUPERFAMILY SSF53822 67 338 1.6E-64 T 14-10-2018 IPR028082 Periplasmic binding protein-like I PhaeoP54_00745 f5a3311533813edd58985213d0c16fea 341 SMART SM00354 7 77 1.5E-30 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 PhaeoP54_00745 f5a3311533813edd58985213d0c16fea 341 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 19 29 1.5E-5 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 PhaeoP54_00745 f5a3311533813edd58985213d0c16fea 341 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 9 19 1.5E-5 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 PhaeoP54_00745 f5a3311533813edd58985213d0c16fea 341 Gene3D G3DSA:3.40.50.2300 166 296 4.7E-73 T 14-10-2018 PhaeoP54_00745 f5a3311533813edd58985213d0c16fea 341 Pfam PF13377 Periplasmic binding protein-like domain 177 334 1.0E-36 T 14-10-2018 PhaeoP54_00745 f5a3311533813edd58985213d0c16fea 341 Gene3D G3DSA:3.40.50.2300 67 312 4.7E-73 T 14-10-2018 PhaeoP54_00745 f5a3311533813edd58985213d0c16fea 341 Pfam PF00356 Bacterial regulatory proteins, lacI family 9 54 5.1E-20 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 PhaeoP54_00410 1570806c9300d5c1c8ad859c72d6ce2d 419 Gene3D G3DSA:3.40.50.2000 74 215 2.9E-47 T 14-10-2018 PhaeoP54_00410 1570806c9300d5c1c8ad859c72d6ce2d 419 Pfam PF00534 Glycosyl transferases group 1 226 391 2.7E-27 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 PhaeoP54_00410 1570806c9300d5c1c8ad859c72d6ce2d 419 SUPERFAMILY SSF53756 25 413 1.3E-59 T 14-10-2018 PhaeoP54_00410 1570806c9300d5c1c8ad859c72d6ce2d 419 Gene3D G3DSA:3.40.50.2000 216 399 2.9E-47 T 14-10-2018 PhaeoP54_02000 5ea267e776ec6e8d87e520db86c7cbf0 186 TIGRFAM TIGR01848 PHA_reg_PhaR: polyhydroxyalkanoate synthesis repressor PhaR 9 113 5.6E-44 T 14-10-2018 IPR010134 Polyhydroxyalkanoate synthesis repressor PhaR GO:0006355 PhaeoP54_02000 5ea267e776ec6e8d87e520db86c7cbf0 186 Pfam PF07879 PHB/PHA accumulation regulator DNA-binding domain 9 68 2.4E-27 T 14-10-2018 IPR012909 PHA accumulation regulator DNA-binding, N-terminal PhaeoP54_02000 5ea267e776ec6e8d87e520db86c7cbf0 186 Pfam PF05233 PHB accumulation regulatory domain 73 111 2.8E-10 T 14-10-2018 IPR007897 PHB accumulation regulatory PhaeoP54_01735 ecc64c5c753adcbeea62c3a7707a1f46 424 SUPERFAMILY SSF103473 7 374 6.67E-44 T 14-10-2018 IPR036259 MFS transporter superfamily PhaeoP54_01735 ecc64c5c753adcbeea62c3a7707a1f46 424 Gene3D G3DSA:1.20.1250.20 198 386 2.5E-18 T 14-10-2018 PhaeoP54_01735 ecc64c5c753adcbeea62c3a7707a1f46 424 Pfam PF07690 Major Facilitator Superfamily 206 380 3.3E-18 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PhaeoP54_01735 ecc64c5c753adcbeea62c3a7707a1f46 424 Pfam PF07690 Major Facilitator Superfamily 17 177 2.4E-8 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PhaeoP54_01735 ecc64c5c753adcbeea62c3a7707a1f46 424 Gene3D G3DSA:1.20.1250.20 2 197 7.0E-15 T 14-10-2018 PhaeoP54_01863 ea82d4f459231d46048888d7c735c901 174 SUPERFAMILY SSF56524 49 172 7.85E-22 T 14-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 PhaeoP54_01863 ea82d4f459231d46048888d7c735c901 174 Pfam PF00174 Oxidoreductase molybdopterin binding domain 72 147 1.2E-7 T 14-10-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 PhaeoP54_01863 ea82d4f459231d46048888d7c735c901 174 Gene3D G3DSA:3.90.420.10 21 148 4.7E-7 T 14-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 PhaeoP54_02737 8109e559a7450b5243c80faaccdc1add 283 SUPERFAMILY SSF161098 85 266 2.35E-27 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_02737 8109e559a7450b5243c80faaccdc1add 283 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 109 278 3.2E-20 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PhaeoP54_02737 8109e559a7450b5243c80faaccdc1add 283 Gene3D G3DSA:1.10.3720.10 82 280 1.5E-20 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_01592 573074d3042f2626d4c9c9c223f1db0c 251 SUPERFAMILY SSF53335 33 243 4.34E-37 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PhaeoP54_01592 573074d3042f2626d4c9c9c223f1db0c 251 PIRSF PIRSF005461 23 250 4.5E-68 T 14-10-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 PhaeoP54_01592 573074d3042f2626d4c9c9c223f1db0c 251 Hamap MF_01547 Ribosomal RNA large subunit methyltransferase E [rlmE]. 42 242 28.147 T 14-10-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 PhaeoP54_01592 573074d3042f2626d4c9c9c223f1db0c 251 Pfam PF01728 FtsJ-like methyltransferase 58 241 9.7E-53 T 14-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 PhaeoP54_01592 573074d3042f2626d4c9c9c223f1db0c 251 Gene3D G3DSA:3.40.50.150 57 248 3.0E-57 T 14-10-2018 PhaeoP54_01138 5606ec43007ec09e54bc92ed7bfe46c5 146 SUPERFAMILY SSF158682 7 141 3.79E-30 T 14-10-2018 IPR029024 TerB-like PhaeoP54_01138 5606ec43007ec09e54bc92ed7bfe46c5 146 Gene3D G3DSA:1.10.3680.10 10 135 1.9E-15 T 14-10-2018 IPR029024 TerB-like PhaeoP54_01138 5606ec43007ec09e54bc92ed7bfe46c5 146 Pfam PF05099 Tellurite resistance protein TerB 5 139 1.4E-35 T 14-10-2018 IPR007791 Co-chaperone DjlA, N-terminal PhaeoP54_00578 f11b191b87fffc0ae62d876ea278e376 282 SUPERFAMILY SSF48452 54 276 1.77E-15 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 PhaeoP54_00578 f11b191b87fffc0ae62d876ea278e376 282 Gene3D G3DSA:1.25.40.10 26 281 6.0E-24 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 PhaeoP54_00578 f11b191b87fffc0ae62d876ea278e376 282 Pfam PF13432 Tetratricopeptide repeat 52 94 0.005 T 14-10-2018 PhaeoP54_00578 f11b191b87fffc0ae62d876ea278e376 282 SMART SM00028 235 268 38.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 PhaeoP54_00578 f11b191b87fffc0ae62d876ea278e376 282 SMART SM00028 172 205 12.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 PhaeoP54_00578 f11b191b87fffc0ae62d876ea278e376 282 SMART SM00028 71 104 210.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 PhaeoP54_02178 8f188779044037f0338351cf06d30e94 378 SUPERFAMILY SSF55979 14 130 3.14E-12 T 14-10-2018 PhaeoP54_02178 8f188779044037f0338351cf06d30e94 378 Gene3D G3DSA:3.10.150.10 17 259 1.9E-55 T 14-10-2018 PhaeoP54_02178 8f188779044037f0338351cf06d30e94 378 Pfam PF02767 DNA polymerase III beta subunit, central domain 144 260 1.7E-17 T 14-10-2018 IPR022637 DNA polymerase III, beta sliding clamp, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 PhaeoP54_02178 8f188779044037f0338351cf06d30e94 378 SUPERFAMILY SSF55979 142 261 3.45E-14 T 14-10-2018 PhaeoP54_02178 8f188779044037f0338351cf06d30e94 378 Gene3D G3DSA:3.70.10.10 151 376 1.9E-55 T 14-10-2018 PhaeoP54_02178 8f188779044037f0338351cf06d30e94 378 SMART SM00480 30 374 7.2E-11 T 14-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 PhaeoP54_02178 8f188779044037f0338351cf06d30e94 378 SUPERFAMILY SSF55979 263 378 1.67E-9 T 14-10-2018 PhaeoP54_02178 8f188779044037f0338351cf06d30e94 378 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 20 132 2.8E-7 T 14-10-2018 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 PhaeoP54_01948 d1bd3bb7c6ed8b31b23fd45dd1d4dd62 463 SUPERFAMILY SSF53187 4 460 9.95E-65 T 14-10-2018 PhaeoP54_01948 d1bd3bb7c6ed8b31b23fd45dd1d4dd62 463 Pfam PF01546 Peptidase family M20/M25/M40 84 458 1.7E-35 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 PhaeoP54_01948 d1bd3bb7c6ed8b31b23fd45dd1d4dd62 463 Gene3D G3DSA:3.40.630.10 19 453 1.8E-147 T 14-10-2018 PhaeoP54_01948 d1bd3bb7c6ed8b31b23fd45dd1d4dd62 463 Pfam PF07687 Peptidase dimerisation domain 209 360 5.0E-21 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain PhaeoP54_01948 d1bd3bb7c6ed8b31b23fd45dd1d4dd62 463 Gene3D G3DSA:3.30.70.360 208 380 1.8E-147 T 14-10-2018 PhaeoP54_02006 e79c9c7384549c1318005d4822d977b4 147 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 122 5.7E-9 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain PhaeoP54_02006 e79c9c7384549c1318005d4822d977b4 147 SUPERFAMILY SSF54593 3 127 7.38E-26 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PhaeoP54_02006 e79c9c7384549c1318005d4822d977b4 147 Gene3D G3DSA:3.10.180.10 2 144 4.0E-47 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PhaeoP54_00261 3375d3956746c57feffb2ff187af690a 223 PIRSF PIRSF000847 1 223 2.8E-41 T 14-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 PhaeoP54_00261 3375d3956746c57feffb2ff187af690a 223 Gene3D G3DSA:1.20.120.1760 1 170 1.8E-14 T 14-10-2018 PhaeoP54_00261 3375d3956746c57feffb2ff187af690a 223 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 50 72 - T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 PhaeoP54_00261 3375d3956746c57feffb2ff187af690a 223 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 5 221 1.5E-40 T 14-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 PhaeoP54_00261 3375d3956746c57feffb2ff187af690a 223 Pfam PF01066 CDP-alcohol phosphatidyltransferase 5 72 4.3E-16 T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 PhaeoP54_03765 bd660daaecd1834afbbc424fdbe4759b 102 Pfam PF04267 Sarcosine oxidase, delta subunit family 2 83 5.2E-30 T 14-10-2018 IPR006279 Sarcosine oxidase, delta subunit, heterotetrameric GO:0008115|GO:0046653 KEGG: 00260+1.5.3.1|MetaCyc: PWY-3661|MetaCyc: PWY-4722 PhaeoP54_03765 bd660daaecd1834afbbc424fdbe4759b 102 Gene3D G3DSA:3.30.2270.10 1 99 2.7E-28 T 14-10-2018 IPR038561 Sarcosine oxidase subunit delta superfamily KEGG: 00260+1.5.3.1|MetaCyc: PWY-3661|MetaCyc: PWY-4722 PhaeoP54_00356 fda242cf4eeb698b021c45d2a7165cb5 420 Pfam PF01757 Acyltransferase family 11 331 3.5E-26 T 14-10-2018 IPR002656 Acyltransferase 3 GO:0016747 PhaeoP54_01083 0b5b646c900ae8574ef6f81612748b9c 268 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 265 6.3E-72 T 14-10-2018 PhaeoP54_01083 0b5b646c900ae8574ef6f81612748b9c 268 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 27 36 - T 14-10-2018 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 PhaeoP54_01083 0b5b646c900ae8574ef6f81612748b9c 268 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 267 2.9E-67 T 14-10-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 PhaeoP54_01083 0b5b646c900ae8574ef6f81612748b9c 268 SUPERFAMILY SSF56219 1 268 1.96E-77 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily PhaeoP54_01083 0b5b646c900ae8574ef6f81612748b9c 268 ProSitePatterns PS00728 AP endonucleases family 1 signature 3. 223 234 - T 14-10-2018 IPR020848 AP endonuclease 1, conserved site GO:0003677|GO:0004519|GO:0005622|GO:0006281 Reactome: R-HSA-110357|Reactome: R-HSA-110362|Reactome: R-HSA-110373|Reactome: R-HSA-5651801|Reactome: R-HSA-73930|Reactome: R-HSA-73933 PhaeoP54_01083 0b5b646c900ae8574ef6f81612748b9c 268 Gene3D G3DSA:3.60.10.10 1 268 8.2E-70 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily PhaeoP54_01083 0b5b646c900ae8574ef6f81612748b9c 268 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 4 259 1.8E-22 T 14-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase PhaeoP54_00791 9b7d47d0a3e8b1f3bf9116fbd897dadd 181 SUPERFAMILY SSF46785 97 166 1.85E-10 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_00791 9b7d47d0a3e8b1f3bf9116fbd897dadd 181 Gene3D G3DSA:1.10.10.10 96 176 4.3E-14 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_00791 9b7d47d0a3e8b1f3bf9116fbd897dadd 181 Pfam PF01638 HxlR-like helix-turn-helix 100 173 2.3E-8 T 14-10-2018 IPR002577 Helix-turn-helix, HxlR type PhaeoP54_00791 9b7d47d0a3e8b1f3bf9116fbd897dadd 181 Gene3D G3DSA:1.10.10.10 2 95 1.3E-8 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_00791 9b7d47d0a3e8b1f3bf9116fbd897dadd 181 SUPERFAMILY SSF46785 4 88 1.63E-9 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_00075 d48412ed370f3d5b4247817f8e7bc1b2 454 Pfam PF11700 Vacuole effluxer Atg22 like 154 450 4.4E-24 T 14-10-2018 IPR024671 Autophagy-related protein 22-like PhaeoP54_00075 d48412ed370f3d5b4247817f8e7bc1b2 454 Gene3D G3DSA:1.20.1250.20 5 183 3.2E-10 T 14-10-2018 PhaeoP54_00075 d48412ed370f3d5b4247817f8e7bc1b2 454 Gene3D G3DSA:1.20.1250.20 248 453 6.6E-12 T 14-10-2018 PhaeoP54_00075 d48412ed370f3d5b4247817f8e7bc1b2 454 SUPERFAMILY SSF103473 28 447 1.7E-28 T 14-10-2018 IPR036259 MFS transporter superfamily PhaeoP54_03686 7c185e96ec69f5da3bee3260338a40fe 230 SUPERFAMILY SSF47616 144 217 2.23E-8 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily PhaeoP54_03686 7c185e96ec69f5da3bee3260338a40fe 230 Pfam PF13417 Glutathione S-transferase, N-terminal domain 17 83 7.3E-12 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 PhaeoP54_03686 7c185e96ec69f5da3bee3260338a40fe 230 Pfam PF13410 Glutathione S-transferase, C-terminal domain 153 213 4.0E-6 T 14-10-2018 PhaeoP54_03686 7c185e96ec69f5da3bee3260338a40fe 230 Gene3D G3DSA:1.20.1050.10 90 221 3.2E-20 T 14-10-2018 PhaeoP54_03686 7c185e96ec69f5da3bee3260338a40fe 230 SUPERFAMILY SSF52833 16 107 6.77E-14 T 14-10-2018 IPR036249 Thioredoxin-like superfamily PhaeoP54_03686 7c185e96ec69f5da3bee3260338a40fe 230 Gene3D G3DSA:3.40.30.10 7 84 2.1E-14 T 14-10-2018 PhaeoP54_03455 a3e0d8c684e72850f152b0b984228c36 164 Gene3D G3DSA:3.10.420.10 2 164 2.2E-53 T 14-10-2018 IPR035958 SecB-like superfamily PhaeoP54_03455 a3e0d8c684e72850f152b0b984228c36 164 TIGRFAM TIGR00809 secB: protein-export chaperone SecB 14 157 1.4E-32 T 14-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 PhaeoP54_03455 a3e0d8c684e72850f152b0b984228c36 164 SUPERFAMILY SSF54611 10 150 3.27E-51 T 14-10-2018 IPR035958 SecB-like superfamily PhaeoP54_03455 a3e0d8c684e72850f152b0b984228c36 164 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 82 102 8.7E-23 T 14-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 PhaeoP54_03455 a3e0d8c684e72850f152b0b984228c36 164 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 132 150 8.7E-23 T 14-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 PhaeoP54_03455 a3e0d8c684e72850f152b0b984228c36 164 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 106 128 8.7E-23 T 14-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 PhaeoP54_03455 a3e0d8c684e72850f152b0b984228c36 164 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 19 36 8.7E-23 T 14-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 PhaeoP54_03455 a3e0d8c684e72850f152b0b984228c36 164 Hamap MF_00821 Protein-export protein SecB [secB]. 1 154 27.578 T 14-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 PhaeoP54_03455 a3e0d8c684e72850f152b0b984228c36 164 Pfam PF02556 Preprotein translocase subunit SecB 11 152 5.0E-49 T 14-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 PhaeoP54_01486 089737d55edb96aedc927771be4e4f26 277 SMART SM00226 115 253 9.3E-40 T 14-10-2018 IPR023485 Phosphotyrosine protein phosphatase I PhaeoP54_01486 089737d55edb96aedc927771be4e4f26 277 SMART SM00418 7 88 6.5E-7 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 PhaeoP54_01486 089737d55edb96aedc927771be4e4f26 277 SUPERFAMILY SSF46785 3 92 5.69E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_01486 089737d55edb96aedc927771be4e4f26 277 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 9 24 5.1E-5 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 PhaeoP54_01486 089737d55edb96aedc927771be4e4f26 277 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 44 59 5.1E-5 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 PhaeoP54_01486 089737d55edb96aedc927771be4e4f26 277 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 59 74 5.1E-5 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 PhaeoP54_01486 089737d55edb96aedc927771be4e4f26 277 Gene3D G3DSA:1.10.10.10 3 97 9.1E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_01486 089737d55edb96aedc927771be4e4f26 277 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 117 250 4.5E-18 T 14-10-2018 IPR023485 Phosphotyrosine protein phosphatase I PhaeoP54_01486 089737d55edb96aedc927771be4e4f26 277 Gene3D G3DSA:3.40.50.2300 114 253 2.2E-38 T 14-10-2018 PhaeoP54_01486 089737d55edb96aedc927771be4e4f26 277 Pfam PF12840 Helix-turn-helix domain 8 67 4.6E-10 T 14-10-2018 PhaeoP54_01486 089737d55edb96aedc927771be4e4f26 277 SUPERFAMILY SSF52788 115 253 2.88E-37 T 14-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily PhaeoP54_03924 768b6fc549b53fadce91a8a163b5c825 327 SUPERFAMILY SSF53807 39 314 6.67E-50 T 14-10-2018 PhaeoP54_03924 768b6fc549b53fadce91a8a163b5c825 327 Pfam PF01497 Periplasmic binding protein 53 299 5.0E-23 T 14-10-2018 IPR002491 ABC transporter periplasmic binding domain PhaeoP54_03924 768b6fc549b53fadce91a8a163b5c825 327 Gene3D G3DSA:3.40.50.1980 45 312 8.3E-74 T 14-10-2018 PhaeoP54_03924 768b6fc549b53fadce91a8a163b5c825 327 Gene3D G3DSA:3.40.50.12260 180 299 8.3E-74 T 14-10-2018 PhaeoP54_00627 5bcac1a4b0edf4d5c1b2ac3e9d95a6b0 302 Pfam PF00892 EamA-like transporter family 8 141 9.6E-21 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 PhaeoP54_00627 5bcac1a4b0edf4d5c1b2ac3e9d95a6b0 302 Pfam PF00892 EamA-like transporter family 159 287 7.2E-17 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 PhaeoP54_00627 5bcac1a4b0edf4d5c1b2ac3e9d95a6b0 302 SUPERFAMILY SSF103481 44 144 1.44E-11 T 14-10-2018 PhaeoP54_00627 5bcac1a4b0edf4d5c1b2ac3e9d95a6b0 302 SUPERFAMILY SSF103481 191 290 6.8E-11 T 14-10-2018 PhaeoP54_02547 8277cc68d8eaad006d80e89010fe788d 266 SUPERFAMILY SSF53335 9 264 8.55E-81 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PhaeoP54_02547 8277cc68d8eaad006d80e89010fe788d 266 Gene3D G3DSA:3.40.50.150 1 266 9.4E-87 T 14-10-2018 PhaeoP54_02547 8277cc68d8eaad006d80e89010fe788d 266 Hamap MF_00934 Ribosomal RNA large subunit methyltransferase J [rlmJ]. 2 264 35.559 T 14-10-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 PhaeoP54_02547 8277cc68d8eaad006d80e89010fe788d 266 Pfam PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ 33 261 1.1E-59 T 14-10-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 PhaeoP54_03535 1a38f8d0ea1f424c80ba8c37a90e86f5 187 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 95 2.0E-20 T 14-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 PhaeoP54_03535 1a38f8d0ea1f424c80ba8c37a90e86f5 187 Gene3D G3DSA:3.30.160.100 1 105 1.2E-22 T 14-10-2018 IPR036567 Ribosome hibernation promotion factor-like PhaeoP54_03535 1a38f8d0ea1f424c80ba8c37a90e86f5 187 Hamap MF_00839 Ribosome hibernation promoting factor [hpf]. 1 187 19.933 T 14-10-2018 IPR034694 Ribosome hibernation promoting factor, long/plastid PhaeoP54_03535 1a38f8d0ea1f424c80ba8c37a90e86f5 187 Pfam PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus 130 183 4.2E-17 T 14-10-2018 IPR032528 Sigma 54 modulation/S30EA ribosomal protein, C-terminal PhaeoP54_03535 1a38f8d0ea1f424c80ba8c37a90e86f5 187 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 100 4.9E-21 T 14-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 PhaeoP54_03535 1a38f8d0ea1f424c80ba8c37a90e86f5 187 SUPERFAMILY SSF69754 1 104 3.27E-29 T 14-10-2018 IPR036567 Ribosome hibernation promotion factor-like PhaeoP54_03535 1a38f8d0ea1f424c80ba8c37a90e86f5 187 Gene3D G3DSA:3.30.505.50 143 187 1.5E-12 T 14-10-2018 IPR038416 Sigma 54 modulation/S30EA ribosomal protein, C-terminal domain superfamily PhaeoP54_01471 1da8045f560240c74dee3a3585602ad1 79 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 1 66 29.735 T 14-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 PhaeoP54_01471 1da8045f560240c74dee3a3585602ad1 79 Pfam PF17209 Hfq protein 8 70 3.0E-34 T 14-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 PhaeoP54_01471 1da8045f560240c74dee3a3585602ad1 79 SUPERFAMILY SSF50182 7 72 2.05E-26 T 14-10-2018 IPR010920 LSM domain superfamily PhaeoP54_01471 1da8045f560240c74dee3a3585602ad1 79 Gene3D G3DSA:2.30.30.100 1 78 4.9E-35 T 14-10-2018 PhaeoP54_01471 1da8045f560240c74dee3a3585602ad1 79 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 6 66 7.0E-34 T 14-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 PhaeoP54_02314 baf5f5e8f26fb1384d42bfcf7aef3afa 219 Pfam PF00005 ABC transporter 21 148 3.1E-12 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PhaeoP54_02314 baf5f5e8f26fb1384d42bfcf7aef3afa 219 SUPERFAMILY SSF52540 2 214 1.2E-33 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_02314 baf5f5e8f26fb1384d42bfcf7aef3afa 219 SMART SM00382 30 207 4.0E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_02314 baf5f5e8f26fb1384d42bfcf7aef3afa 219 Gene3D G3DSA:3.40.50.300 1 217 9.7E-33 T 14-10-2018 PhaeoP54_02314 baf5f5e8f26fb1384d42bfcf7aef3afa 219 ProSitePatterns PS00211 ABC transporters family signature. 123 137 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PhaeoP54_02297 28f631a8e843a6ba1ad5044c3bda2014 146 SMART SM00226 3 144 2.8E-48 T 14-10-2018 IPR023485 Phosphotyrosine protein phosphatase I PhaeoP54_02297 28f631a8e843a6ba1ad5044c3bda2014 146 SUPERFAMILY SSF52788 2 145 6.15E-46 T 14-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily PhaeoP54_02297 28f631a8e843a6ba1ad5044c3bda2014 146 Gene3D G3DSA:3.40.50.2300 1 146 7.2E-51 T 14-10-2018 PhaeoP54_02297 28f631a8e843a6ba1ad5044c3bda2014 146 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 76 91 6.3E-15 T 14-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 PhaeoP54_02297 28f631a8e843a6ba1ad5044c3bda2014 146 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 42 58 6.3E-15 T 14-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 PhaeoP54_02297 28f631a8e843a6ba1ad5044c3bda2014 146 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 5 22 6.3E-15 T 14-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 PhaeoP54_02297 28f631a8e843a6ba1ad5044c3bda2014 146 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 118 133 6.3E-15 T 14-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 PhaeoP54_02297 28f631a8e843a6ba1ad5044c3bda2014 146 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 5 141 2.5E-35 T 14-10-2018 IPR023485 Phosphotyrosine protein phosphatase I PhaeoP54_00400 0e58a6ef6807aecf4d2c08940f09af7e 256 Gene3D G3DSA:3.40.50.300 2 256 1.5E-68 T 14-10-2018 PhaeoP54_00400 0e58a6ef6807aecf4d2c08940f09af7e 256 Pfam PF00005 ABC transporter 21 177 2.0E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PhaeoP54_00400 0e58a6ef6807aecf4d2c08940f09af7e 256 PIRSF PIRSF037116 1 256 1.6E-142 T 14-10-2018 IPR012700 Phosphonate C-P lyase system, PhnK PhaeoP54_00400 0e58a6ef6807aecf4d2c08940f09af7e 256 TIGRFAM TIGR02323 CP_lyasePhnK: phosphonate C-P lyase system protein PhnK 3 254 1.3E-117 T 14-10-2018 IPR012700 Phosphonate C-P lyase system, PhnK PhaeoP54_00400 0e58a6ef6807aecf4d2c08940f09af7e 256 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PhaeoP54_00400 0e58a6ef6807aecf4d2c08940f09af7e 256 SMART SM00382 29 227 9.0E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_00400 0e58a6ef6807aecf4d2c08940f09af7e 256 SUPERFAMILY SSF52540 3 252 9.43E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_03826 bb7a5b05d5b1261ed1c63caf5268285f 1420 Gene3D G3DSA:3.40.50.150 104 251 2.6E-13 T 14-10-2018 PhaeoP54_03826 bb7a5b05d5b1261ed1c63caf5268285f 1420 Pfam PF13871 C-terminal domain on Strawberry notch homologue 887 1141 6.1E-85 T 14-10-2018 IPR026937 Strawberry notch, helicase C domain PhaeoP54_03826 bb7a5b05d5b1261ed1c63caf5268285f 1420 SUPERFAMILY SSF52540 422 655 1.11E-11 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_03826 bb7a5b05d5b1261ed1c63caf5268285f 1420 Pfam PF05175 Methyltransferase small domain 130 234 1.3E-4 T 14-10-2018 IPR007848 Methyltransferase small domain GO:0008168 PhaeoP54_03826 bb7a5b05d5b1261ed1c63caf5268285f 1420 SUPERFAMILY SSF53335 109 292 6.92E-21 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PhaeoP54_03826 bb7a5b05d5b1261ed1c63caf5268285f 1420 Pfam PF13872 P-loop containing NTP hydrolase pore-1 390 717 2.1E-110 T 14-10-2018 IPR039187 Strawberry notch, AAA domain PhaeoP54_03826 bb7a5b05d5b1261ed1c63caf5268285f 1420 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 191 203 2.9E-6 T 14-10-2018 PhaeoP54_03826 bb7a5b05d5b1261ed1c63caf5268285f 1420 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 211 235 2.9E-6 T 14-10-2018 PhaeoP54_03826 bb7a5b05d5b1261ed1c63caf5268285f 1420 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 107 123 2.9E-6 T 14-10-2018 PhaeoP54_03826 bb7a5b05d5b1261ed1c63caf5268285f 1420 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 131 145 2.9E-6 T 14-10-2018 PhaeoP54_00379 ba8b780ba7495568209dd306cdc91065 325 SUPERFAMILY SSF47240 41 284 3.08E-83 T 14-10-2018 IPR009078 Ferritin-like superfamily PhaeoP54_00379 ba8b780ba7495568209dd306cdc91065 325 Pfam PF05138 Phenylacetic acid catabolic protein 31 305 6.0E-100 T 14-10-2018 IPR007814 1,2-phenylacetyl-CoA epoxidase, subunit A/C GO:0010124 PhaeoP54_00379 ba8b780ba7495568209dd306cdc91065 325 TIGRFAM TIGR02156 PA_CoA_Oxy1: phenylacetate-CoA oxygenase, PaaG subunit 21 308 5.3E-158 T 14-10-2018 IPR011881 1,2-phenylacetyl-CoA epoxidase, subunit A GO:0010124|GO:0097266 KEGG: 00360+1.14.13.149 PhaeoP54_00379 ba8b780ba7495568209dd306cdc91065 325 Gene3D G3DSA:1.20.1260.10 14 323 6.4E-131 T 14-10-2018 IPR012347 Ferritin-like PhaeoP54_03779 b617928c438664ebc25bad0c80f3f2be 128 Gene3D G3DSA:3.40.50.2300 1 127 3.3E-28 T 14-10-2018 PhaeoP54_03779 b617928c438664ebc25bad0c80f3f2be 128 SUPERFAMILY SSF52172 6 126 6.69E-29 T 14-10-2018 IPR011006 CheY-like superfamily PhaeoP54_03779 b617928c438664ebc25bad0c80f3f2be 128 SMART SM00448 7 121 2.2E-19 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PhaeoP54_03779 b617928c438664ebc25bad0c80f3f2be 128 Pfam PF00072 Response regulator receiver domain 9 122 3.4E-20 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PhaeoP54_01883 c83f104ae2af4947d4db5e239251ceb0 729 Pfam PF04453 Organic solvent tolerance protein 287 653 3.2E-43 T 14-10-2018 IPR007543 Organic solvent tolerance protein, C-terminal GO:0010033|GO:0019867|GO:0061024 PhaeoP54_01883 c83f104ae2af4947d4db5e239251ceb0 729 Hamap MF_01411 LPS-assembly protein LptD [lptD]. 14 715 14.09 T 14-10-2018 IPR020889 LPS-assembly protein LptD GO:0009279|GO:0010033|GO:0015920|GO:0043165 PhaeoP54_01725 6c0ce358a834ad4b9d9cb41de580fe95 342 Pfam PF00487 Fatty acid desaturase 60 312 4.5E-36 T 14-10-2018 IPR005804 Fatty acid desaturase domain GO:0006629 PhaeoP54_02831 dfb3bb3bc00e94e1dcd9f274ab147895 259 PRINTS PR01805 VacJ lipoprotein signature 142 159 6.9E-24 T 14-10-2018 IPR007428 MlaA lipoprotein GO:0016020 PhaeoP54_02831 dfb3bb3bc00e94e1dcd9f274ab147895 259 PRINTS PR01805 VacJ lipoprotein signature 106 123 6.9E-24 T 14-10-2018 IPR007428 MlaA lipoprotein GO:0016020 PhaeoP54_02831 dfb3bb3bc00e94e1dcd9f274ab147895 259 PRINTS PR01805 VacJ lipoprotein signature 38 51 6.9E-24 T 14-10-2018 IPR007428 MlaA lipoprotein GO:0016020 PhaeoP54_02831 dfb3bb3bc00e94e1dcd9f274ab147895 259 PRINTS PR01805 VacJ lipoprotein signature 55 71 6.9E-24 T 14-10-2018 IPR007428 MlaA lipoprotein GO:0016020 PhaeoP54_02831 dfb3bb3bc00e94e1dcd9f274ab147895 259 Pfam PF04333 MlaA lipoprotein 37 232 1.5E-64 T 14-10-2018 IPR007428 MlaA lipoprotein GO:0016020 PhaeoP54_00122 bee058803b2b6e653f86895a69b9d3ae 557 Pfam PF13598 Domain of unknown function (DUF4139) 243 552 4.3E-41 T 14-10-2018 IPR037291 Domain of unknown function DUF4139 PhaeoP54_00122 bee058803b2b6e653f86895a69b9d3ae 557 TIGRFAM TIGR02231 TIGR02231: conserved hypothetical protein 34 553 3.1E-61 T 14-10-2018 IPR011935 Conserved hypothetical protein CHP02231 PhaeoP54_00122 bee058803b2b6e653f86895a69b9d3ae 557 Pfam PF13600 N-terminal domain of unknown function (DUF4140) 38 132 1.6E-18 T 14-10-2018 IPR025554 Domain of unknown function DUF4140 PhaeoP54_03675 3246ed1a68cde929d116a6a81241153b 152 ProSitePatterns PS01318 TsaA-like domain signature. 91 102 - T 14-10-2018 IPR023368 Uncharacterised protein family UPF0066, conserved site PhaeoP54_03675 3246ed1a68cde929d116a6a81241153b 152 Gene3D G3DSA:2.40.30.70 2 141 7.6E-44 T 14-10-2018 IPR036414 YaeB, N-terminal domain superfamily PhaeoP54_03675 3246ed1a68cde929d116a6a81241153b 152 Pfam PF01980 Uncharacterised protein family UPF0066 34 143 2.0E-34 T 14-10-2018 IPR023370 YaeB-like, N-terminal domain PhaeoP54_03675 3246ed1a68cde929d116a6a81241153b 152 TIGRFAM TIGR00104 tRNA_TsaA: tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA 15 148 5.8E-38 T 14-10-2018 IPR023370 YaeB-like, N-terminal domain PhaeoP54_03675 3246ed1a68cde929d116a6a81241153b 152 SUPERFAMILY SSF118196 14 152 8.37E-46 T 14-10-2018 IPR036413 YaeB-like superfamily PhaeoP54_00651 945b6ed39cf3feb0d36b55d292e56e78 304 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 110 304 5.2E-26 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PhaeoP54_00651 945b6ed39cf3feb0d36b55d292e56e78 304 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 7 51 1.1E-9 T 14-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain PhaeoP54_00651 945b6ed39cf3feb0d36b55d292e56e78 304 SUPERFAMILY SSF161098 87 284 7.72E-25 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_00651 945b6ed39cf3feb0d36b55d292e56e78 304 Gene3D G3DSA:1.10.3720.10 80 300 1.5E-23 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_00136 52af89411724a1b9141ec8df64812388 374 Gene3D G3DSA:3.40.190.10 40 342 9.0E-69 T 14-10-2018 PhaeoP54_00136 52af89411724a1b9141ec8df64812388 374 Pfam PF13416 Bacterial extracellular solute-binding protein 51 336 1.3E-19 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein PhaeoP54_00136 52af89411724a1b9141ec8df64812388 374 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 84 98 2.5E-21 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PhaeoP54_00136 52af89411724a1b9141ec8df64812388 374 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 274 293 2.5E-21 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PhaeoP54_00136 52af89411724a1b9141ec8df64812388 374 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 135 151 2.5E-21 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PhaeoP54_00136 52af89411724a1b9141ec8df64812388 374 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 162 176 2.5E-21 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PhaeoP54_00136 52af89411724a1b9141ec8df64812388 374 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 40 56 2.5E-21 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PhaeoP54_00136 52af89411724a1b9141ec8df64812388 374 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 56 77 2.5E-21 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PhaeoP54_00136 52af89411724a1b9141ec8df64812388 374 Gene3D G3DSA:3.40.190.10 144 343 9.0E-69 T 14-10-2018 PhaeoP54_00136 52af89411724a1b9141ec8df64812388 374 SUPERFAMILY SSF53850 35 372 2.74E-55 T 14-10-2018 PhaeoP54_01128 2c7d618157ad07333c9ed4548c29a174 406 PIRSF PIRSF000390 7 400 2.2E-62 T 14-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase PhaeoP54_01128 2c7d618157ad07333c9ed4548c29a174 406 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 22 392 1.5E-62 T 14-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase PhaeoP54_01128 2c7d618157ad07333c9ed4548c29a174 406 Gene3D G3DSA:3.40.640.10 4 268 1.4E-65 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PhaeoP54_01128 2c7d618157ad07333c9ed4548c29a174 406 SUPERFAMILY SSF53383 16 397 1.75E-71 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PhaeoP54_03931 9805c393fb5f217e2dec9bdbd4d534d5 347 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 271 313 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 PhaeoP54_03931 9805c393fb5f217e2dec9bdbd4d534d5 347 SUPERFAMILY SSF46689 270 321 5.38E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PhaeoP54_03931 9805c393fb5f217e2dec9bdbd4d534d5 347 Gene3D G3DSA:1.10.10.60 213 322 4.1E-23 T 14-10-2018 PhaeoP54_03931 9805c393fb5f217e2dec9bdbd4d534d5 347 SUPERFAMILY SSF46689 218 265 3.05E-5 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PhaeoP54_03931 9805c393fb5f217e2dec9bdbd4d534d5 347 Pfam PF12833 Helix-turn-helix domain 240 318 5.2E-20 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PhaeoP54_03931 9805c393fb5f217e2dec9bdbd4d534d5 347 SMART SM00342 234 317 6.2E-21 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PhaeoP54_01321 d928c673960f2f68e31a3171957166d3 77 TIGRFAM TIGR00302 TIGR00302: phosphoribosylformylglycinamidine synthase, purS protein 1 76 4.0E-27 T 14-10-2018 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 PhaeoP54_01321 d928c673960f2f68e31a3171957166d3 77 SUPERFAMILY SSF82697 1 74 2.96E-26 T 14-10-2018 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 PhaeoP54_01321 d928c673960f2f68e31a3171957166d3 77 Gene3D G3DSA:3.30.1280.10 1 77 1.8E-29 T 14-10-2018 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 PhaeoP54_01321 d928c673960f2f68e31a3171957166d3 77 Pfam PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase 2 74 1.5E-29 T 14-10-2018 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 PhaeoP54_01321 d928c673960f2f68e31a3171957166d3 77 Hamap MF_01926 Phosphoribosylformylglycinamidine synthase subunit PurS [purS]. 1 75 20.309 T 14-10-2018 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 PhaeoP54_01321 d928c673960f2f68e31a3171957166d3 77 ProDom PD010362 PHOSPHORIBOSYLFORMYLGLYCINAMIDINE PURS SYNTHETASE SYNTHASE COMPONENT SYNTHASE LIGASE FGAM UPF0062 I 9 75 3.0E-21 T 14-10-2018 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 PhaeoP54_02709 7c6567306c2bf07b7a4b623182876cca 338 Gene3D G3DSA:3.40.50.2300 30 294 2.6E-65 T 14-10-2018 PhaeoP54_02709 7c6567306c2bf07b7a4b623182876cca 338 SUPERFAMILY SSF53822 12 321 8.44E-61 T 14-10-2018 IPR028082 Periplasmic binding protein-like I PhaeoP54_02709 7c6567306c2bf07b7a4b623182876cca 338 Pfam PF13407 Periplasmic binding protein domain 29 293 9.4E-44 T 14-10-2018 IPR025997 Periplasmic binding protein PhaeoP54_02709 7c6567306c2bf07b7a4b623182876cca 338 Gene3D G3DSA:3.40.50.2300 130 277 2.6E-65 T 14-10-2018 PhaeoP54_03588 9b0250a601a7a969bc591dc96f3b300f 258 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 99 119 - T 14-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 PhaeoP54_03588 9b0250a601a7a969bc591dc96f3b300f 258 Gene3D G3DSA:3.90.226.10 2 200 2.1E-74 T 14-10-2018 PhaeoP54_03588 9b0250a601a7a969bc591dc96f3b300f 258 SUPERFAMILY SSF52096 1 257 1.14E-89 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily PhaeoP54_03588 9b0250a601a7a969bc591dc96f3b300f 258 Pfam PF00378 Enoyl-CoA hydratase/isomerase 10 258 2.3E-82 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 PhaeoP54_03588 9b0250a601a7a969bc591dc96f3b300f 258 Gene3D G3DSA:1.10.12.10 201 257 3.8E-26 T 14-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal PhaeoP54_03030 8e7bd96b56427787b9ab4b1db9075d7f 126 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 13 122 24.45 T 14-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PhaeoP54_03030 8e7bd96b56427787b9ab4b1db9075d7f 126 SUPERFAMILY SSF54843 11 124 7.33E-41 T 14-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 PhaeoP54_03030 8e7bd96b56427787b9ab4b1db9075d7f 126 Pfam PF00237 Ribosomal protein L22p/L17e 17 119 5.2E-33 T 14-10-2018 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 PhaeoP54_03030 8e7bd96b56427787b9ab4b1db9075d7f 126 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 17 119 3.7E-32 T 14-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PhaeoP54_03030 8e7bd96b56427787b9ab4b1db9075d7f 126 Gene3D G3DSA:3.90.470.10 3 126 1.3E-40 T 14-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 PhaeoP54_03227 ed29ccacee300510e6a20599de99cd9b 119 SUPERFAMILY SSF54909 6 102 2.18E-16 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel PhaeoP54_03227 ed29ccacee300510e6a20599de99cd9b 119 Pfam PF07978 NIPSNAP 12 102 1.7E-6 T 14-10-2018 IPR012577 NIPSNAP PhaeoP54_03227 ed29ccacee300510e6a20599de99cd9b 119 Gene3D G3DSA:3.30.70.100 1 109 3.5E-12 T 14-10-2018 PhaeoP54_03892 1669b55fcedeb7585f351ca77965d90d 626 Gene3D G3DSA:1.10.760.10 400 556 6.3E-17 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PhaeoP54_03892 1669b55fcedeb7585f351ca77965d90d 626 Gene3D G3DSA:1.10.760.10 258 389 1.2E-9 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PhaeoP54_03892 1669b55fcedeb7585f351ca77965d90d 626 SUPERFAMILY SSF46626 261 382 5.38E-10 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PhaeoP54_03892 1669b55fcedeb7585f351ca77965d90d 626 SUPERFAMILY SSF46626 380 514 6.12E-23 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PhaeoP54_03892 1669b55fcedeb7585f351ca77965d90d 626 Pfam PF03150 Di-haem cytochrome c peroxidase 409 489 7.1E-7 T 14-10-2018 IPR004852 Di-haem cytochrome c peroxidase GO:0016491|GO:0055114 PhaeoP54_00413 ae13816858e17f256e5cbd341ddbe930 458 SUPERFAMILY SSF89796 188 392 3.01E-52 T 14-10-2018 IPR023606 CoA-transferase family III domain superfamily PhaeoP54_00413 ae13816858e17f256e5cbd341ddbe930 458 Pfam PF02515 CoA-transferase family III 190 390 1.1E-43 T 14-10-2018 IPR003673 CoA-transferase family III GO:0003824 PhaeoP54_00413 ae13816858e17f256e5cbd341ddbe930 458 Gene3D G3DSA:3.40.50.10540 188 451 1.8E-53 T 14-10-2018 IPR023606 CoA-transferase family III domain superfamily PhaeoP54_00413 ae13816858e17f256e5cbd341ddbe930 458 SUPERFAMILY SSF89796 14 178 4.84E-19 T 14-10-2018 IPR023606 CoA-transferase family III domain superfamily PhaeoP54_01413 c66d3ecc50a575ce12e9d10fdedbbe5f 393 Pfam PF02684 Lipid-A-disaccharide synthetase 5 350 3.0E-88 T 14-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 PhaeoP54_01413 c66d3ecc50a575ce12e9d10fdedbbe5f 393 TIGRFAM TIGR00215 lpxB: lipid-A-disaccharide synthase 5 383 1.3E-75 T 14-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 PhaeoP54_01413 c66d3ecc50a575ce12e9d10fdedbbe5f 393 SUPERFAMILY SSF53756 4 369 8.16E-34 T 14-10-2018 PhaeoP54_00607 2af5d3fe17ad99d8a4d3df1ee9ea968c 158 Pfam PF02469 Fasciclin domain 37 158 6.4E-39 T 14-10-2018 IPR000782 FAS1 domain PhaeoP54_00607 2af5d3fe17ad99d8a4d3df1ee9ea968c 158 SUPERFAMILY SSF82153 26 158 9.81E-44 T 14-10-2018 IPR036378 FAS1 domain superfamily PhaeoP54_00607 2af5d3fe17ad99d8a4d3df1ee9ea968c 158 Gene3D G3DSA:2.30.180.10 24 158 1.5E-55 T 14-10-2018 IPR036378 FAS1 domain superfamily PhaeoP54_00607 2af5d3fe17ad99d8a4d3df1ee9ea968c 158 SMART SM00554 61 158 9.2E-32 T 14-10-2018 IPR000782 FAS1 domain PhaeoP54_02846 7bf9ef165ca01a58eb2f9beaf2e929d7 272 Pfam PF03567 Sulfotransferase family 6 248 4.7E-38 T 14-10-2018 IPR005331 Sulfotransferase GO:0008146|GO:0016021 PhaeoP54_03219 fe96d20a0ffdaa41c89350a1732862ca 439 SUPERFAMILY SSF63411 248 437 6.33E-48 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 PhaeoP54_03219 fe96d20a0ffdaa41c89350a1732862ca 439 Gene3D G3DSA:3.30.830.10 28 235 3.3E-40 T 14-10-2018 PhaeoP54_03219 fe96d20a0ffdaa41c89350a1732862ca 439 SUPERFAMILY SSF63411 19 242 2.33E-45 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 PhaeoP54_03219 fe96d20a0ffdaa41c89350a1732862ca 439 Gene3D G3DSA:3.30.830.10 242 435 4.5E-49 T 14-10-2018 PhaeoP54_03219 fe96d20a0ffdaa41c89350a1732862ca 439 Pfam PF00675 Insulinase (Peptidase family M16) 39 153 5.8E-7 T 14-10-2018 IPR011765 Peptidase M16, N-terminal PhaeoP54_03219 fe96d20a0ffdaa41c89350a1732862ca 439 Pfam PF05193 Peptidase M16 inactive domain 190 364 2.4E-27 T 14-10-2018 IPR007863 Peptidase M16, C-terminal PhaeoP54_00419 c0a92565c94b26962adc19f65a0f4001 209 Gene3D G3DSA:3.40.30.10 4 206 8.2E-58 T 14-10-2018 PhaeoP54_00419 c0a92565c94b26962adc19f65a0f4001 209 Pfam PF13417 Glutathione S-transferase, N-terminal domain 4 81 4.9E-14 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 PhaeoP54_00419 c0a92565c94b26962adc19f65a0f4001 209 SUPERFAMILY SSF52833 1 89 2.57E-21 T 14-10-2018 IPR036249 Thioredoxin-like superfamily PhaeoP54_00419 c0a92565c94b26962adc19f65a0f4001 209 Gene3D G3DSA:1.20.1050.10 82 204 8.2E-58 T 14-10-2018 PhaeoP54_00419 c0a92565c94b26962adc19f65a0f4001 209 Pfam PF00043 Glutathione S-transferase, C-terminal domain 133 205 1.8E-9 T 14-10-2018 IPR004046 Glutathione S-transferase, C-terminal PhaeoP54_00419 c0a92565c94b26962adc19f65a0f4001 209 SUPERFAMILY SSF47616 78 207 1.81E-19 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily PhaeoP54_02735 d80efc7dabb729eb385b31928fd233b8 339 SUPERFAMILY SSF53850 30 252 6.62E-25 T 14-10-2018 PhaeoP54_02735 d80efc7dabb729eb385b31928fd233b8 339 Gene3D G3DSA:3.40.190.10 150 335 8.9E-17 T 14-10-2018 PhaeoP54_02735 d80efc7dabb729eb385b31928fd233b8 339 Pfam PF09084 NMT1/THI5 like 41 250 4.6E-21 T 14-10-2018 IPR015168 SsuA/THI5-like PhaeoP54_02735 d80efc7dabb729eb385b31928fd233b8 339 Gene3D G3DSA:3.40.190.10 27 137 2.8E-13 T 14-10-2018 PhaeoP54_01115 1a0b43f75b893875dda9ce11b2f39afc 290 SUPERFAMILY SSF103481 31 146 5.36E-15 T 14-10-2018 PhaeoP54_01115 1a0b43f75b893875dda9ce11b2f39afc 290 Pfam PF00892 EamA-like transporter family 153 288 1.2E-17 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 PhaeoP54_01115 1a0b43f75b893875dda9ce11b2f39afc 290 Pfam PF00892 EamA-like transporter family 8 142 7.5E-15 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 PhaeoP54_01115 1a0b43f75b893875dda9ce11b2f39afc 290 SUPERFAMILY SSF103481 188 289 6.02E-13 T 14-10-2018 PhaeoP54_00254 84a94c5fded427fc3c729fcb2a5ed64d 309 Gene3D G3DSA:3.40.50.300 1 241 1.3E-65 T 14-10-2018 PhaeoP54_00254 84a94c5fded427fc3c729fcb2a5ed64d 309 Pfam PF00005 ABC transporter 21 163 1.9E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PhaeoP54_00254 84a94c5fded427fc3c729fcb2a5ed64d 309 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PhaeoP54_00254 84a94c5fded427fc3c729fcb2a5ed64d 309 SUPERFAMILY SSF52540 3 226 2.15E-62 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_00254 84a94c5fded427fc3c729fcb2a5ed64d 309 SMART SM00382 30 211 4.0E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_02362 0e52be8d64c3d4d05ad2feec023de267 166 Pfam PF01037 Lrp/AsnC ligand binding domain 73 145 3.0E-18 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain PhaeoP54_02362 0e52be8d64c3d4d05ad2feec023de267 166 Pfam PF13412 Winged helix-turn-helix DNA-binding 6 53 5.7E-21 T 14-10-2018 PhaeoP54_02362 0e52be8d64c3d4d05ad2feec023de267 166 Gene3D G3DSA:1.10.10.10 1 59 5.6E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_02362 0e52be8d64c3d4d05ad2feec023de267 166 SUPERFAMILY SSF46785 5 66 1.91E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_02362 0e52be8d64c3d4d05ad2feec023de267 166 SMART SM00344 6 115 1.1E-40 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 PhaeoP54_02362 0e52be8d64c3d4d05ad2feec023de267 166 Gene3D G3DSA:3.30.70.920 60 143 5.4E-20 T 14-10-2018 PhaeoP54_02362 0e52be8d64c3d4d05ad2feec023de267 166 SUPERFAMILY SSF54909 69 154 6.97E-17 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel PhaeoP54_02362 0e52be8d64c3d4d05ad2feec023de267 166 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 6 22 2.4E-18 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 PhaeoP54_02362 0e52be8d64c3d4d05ad2feec023de267 166 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 22 33 2.4E-18 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 PhaeoP54_02362 0e52be8d64c3d4d05ad2feec023de267 166 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 33 52 2.4E-18 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 PhaeoP54_02362 0e52be8d64c3d4d05ad2feec023de267 166 ProSitePatterns PS00519 AsnC-type HTH domain signature. 24 50 - T 14-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site PhaeoP54_00672 335e98cf310f9cb323d4278cf8c247f3 268 SUPERFAMILY SSF50182 102 167 1.93E-16 T 14-10-2018 IPR010920 LSM domain superfamily PhaeoP54_00672 335e98cf310f9cb323d4278cf8c247f3 268 Gene3D G3DSA:3.30.70.100 168 260 1.8E-27 T 14-10-2018 PhaeoP54_00672 335e98cf310f9cb323d4278cf8c247f3 268 SUPERFAMILY SSF82861 16 100 7.72E-15 T 14-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 PhaeoP54_00672 335e98cf310f9cb323d4278cf8c247f3 268 SUPERFAMILY SSF82689 169 261 3.53E-30 T 14-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 PhaeoP54_00672 335e98cf310f9cb323d4278cf8c247f3 268 Pfam PF00924 Mechanosensitive ion channel 60 256 7.5E-49 T 14-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 PhaeoP54_00672 335e98cf310f9cb323d4278cf8c247f3 268 Gene3D G3DSA:2.30.30.60 117 166 2.7E-18 T 14-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily PhaeoP54_00974 43f1e48b97db1ce451276ecb6d2bc3f9 477 Gene3D G3DSA:3.40.50.1220 299 477 1.2E-85 T 14-10-2018 PhaeoP54_00974 43f1e48b97db1ce451276ecb6d2bc3f9 477 SUPERFAMILY SSF52467 307 476 5.14E-73 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily PhaeoP54_00974 43f1e48b97db1ce451276ecb6d2bc3f9 477 Pfam PF02233 NAD(P) transhydrogenase beta subunit 7 473 4.5E-188 T 14-10-2018 IPR034300 NADP transhydrogenase beta-like domain KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 PhaeoP54_00974 43f1e48b97db1ce451276ecb6d2bc3f9 477 PIRSF PIRSF000204 1 477 3.4E-206 T 14-10-2018 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 PhaeoP54_00198 810fe9cd5ba461b0955d1c7ae5370fd4 316 SUPERFAMILY SSF53448 8 249 2.36E-8 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PhaeoP54_02538 f19ec70b81c60dd4100cd96f5fb4be8c 841 Pfam PF02687 FtsX-like permease family 292 379 1.2E-6 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 PhaeoP54_02538 f19ec70b81c60dd4100cd96f5fb4be8c 841 Pfam PF02687 FtsX-like permease family 744 829 9.4E-8 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 PhaeoP54_01563 310f1ac27b911c72c0bcb79f45d69f8b 456 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 207 453 1.2E-62 T 14-10-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 PhaeoP54_01563 310f1ac27b911c72c0bcb79f45d69f8b 456 SUPERFAMILY SSF161098 228 443 2.09E-33 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_01563 310f1ac27b911c72c0bcb79f45d69f8b 456 Gene3D G3DSA:1.10.3720.10 228 456 3.2E-32 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_01563 310f1ac27b911c72c0bcb79f45d69f8b 456 Pfam PF11812 Domain of unknown function (DUF3333) 29 181 1.7E-49 T 14-10-2018 IPR024573 Domain of unknown function DUF3333 PhaeoP54_01563 310f1ac27b911c72c0bcb79f45d69f8b 456 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 251 455 1.1E-21 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PhaeoP54_01873 879bc364b15e797050bd58445e6f16b6 56 Pfam PF01679 Proteolipid membrane potential modulator 2 49 3.3E-23 T 14-10-2018 IPR000612 Proteolipid membrane potential modulator GO:0016021 PhaeoP54_01873 879bc364b15e797050bd58445e6f16b6 56 ProSitePatterns PS01309 Uncharacterized protein family UPF0057 signature. 7 22 - T 14-10-2018 IPR000612 Proteolipid membrane potential modulator GO:0016021 PhaeoP54_01110 b6f0f4193d56e25f2b2ce0cedc8166b2 339 Pfam PF13480 Acetyltransferase (GNAT) domain 158 286 5.8E-13 T 14-10-2018 IPR038740 BioF2-like, acetyltransferase domain KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 PhaeoP54_01110 b6f0f4193d56e25f2b2ce0cedc8166b2 339 Gene3D G3DSA:3.40.630.30 123 308 1.9E-19 T 14-10-2018 PhaeoP54_01110 b6f0f4193d56e25f2b2ce0cedc8166b2 339 SUPERFAMILY SSF55729 148 313 7.21E-27 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase PhaeoP54_03938 e1bacb2841c12f0a572207774d3750d4 203 Gene3D G3DSA:1.10.260.40 22 95 4.9E-16 T 14-10-2018 PhaeoP54_03938 e1bacb2841c12f0a572207774d3750d4 203 Pfam PF07883 Cupin domain 142 200 6.2E-12 T 14-10-2018 IPR013096 Cupin 2, conserved barrel PhaeoP54_03938 e1bacb2841c12f0a572207774d3750d4 203 SUPERFAMILY SSF51182 92 200 1.03E-23 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily PhaeoP54_03938 e1bacb2841c12f0a572207774d3750d4 203 SMART SM00530 27 82 7.4E-13 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PhaeoP54_03938 e1bacb2841c12f0a572207774d3750d4 203 Gene3D G3DSA:2.60.120.10 96 201 3.5E-23 T 14-10-2018 IPR014710 RmlC-like jelly roll fold PhaeoP54_03938 e1bacb2841c12f0a572207774d3750d4 203 SUPERFAMILY SSF47413 23 84 6.97E-15 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 PhaeoP54_03938 e1bacb2841c12f0a572207774d3750d4 203 Pfam PF01381 Helix-turn-helix 28 78 9.6E-14 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PhaeoP54_01294 251192c11a5b28387f543f89026c99d4 168 SMART SM00671 95 131 0.12 T 14-10-2018 IPR006597 Sel1-like repeat PhaeoP54_01294 251192c11a5b28387f543f89026c99d4 168 SMART SM00671 59 94 3.3E-8 T 14-10-2018 IPR006597 Sel1-like repeat PhaeoP54_01294 251192c11a5b28387f543f89026c99d4 168 Pfam PF08238 Sel1 repeat 60 94 1.0E-7 T 14-10-2018 IPR006597 Sel1-like repeat PhaeoP54_01294 251192c11a5b28387f543f89026c99d4 168 Pfam PF08238 Sel1 repeat 97 130 0.0033 T 14-10-2018 IPR006597 Sel1-like repeat PhaeoP54_01294 251192c11a5b28387f543f89026c99d4 168 Gene3D G3DSA:1.25.40.10 31 161 4.7E-30 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 PhaeoP54_01294 251192c11a5b28387f543f89026c99d4 168 SUPERFAMILY SSF81901 33 137 1.44E-17 T 14-10-2018 PhaeoP54_03444 5153714c68c4d8837d9285238724f444 297 SUPERFAMILY SSF109709 121 226 6.02E-33 T 14-10-2018 PhaeoP54_03444 5153714c68c4d8837d9285238724f444 297 Pfam PF02195 ParB-like nuclease domain 40 129 4.0E-28 T 14-10-2018 IPR003115 ParB/Sulfiredoxin PhaeoP54_03444 5153714c68c4d8837d9285238724f444 297 Gene3D G3DSA:3.90.1530.30 52 115 5.3E-27 T 14-10-2018 PhaeoP54_03444 5153714c68c4d8837d9285238724f444 297 SUPERFAMILY SSF110849 39 131 4.45E-28 T 14-10-2018 IPR036086 ParB/Sulfiredoxin superfamily PhaeoP54_03444 5153714c68c4d8837d9285238724f444 297 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 38 209 1.6E-60 T 14-10-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 PhaeoP54_03444 5153714c68c4d8837d9285238724f444 297 SMART SM00470 39 129 6.7E-37 T 14-10-2018 IPR003115 ParB/Sulfiredoxin PhaeoP54_03444 5153714c68c4d8837d9285238724f444 297 Gene3D G3DSA:1.10.10.2830 116 227 5.7E-37 T 14-10-2018 PhaeoP54_01276 2a8380ff1fb1497115c356e3f89a432d 216 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 39 172 8.3E-21 T 14-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ PhaeoP54_03692 4edd783ac51f66773cb8b589f709a841 326 Gene3D G3DSA:1.10.3720.10 83 315 8.2E-20 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_03692 4edd783ac51f66773cb8b589f709a841 326 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 319 1.2E-37 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PhaeoP54_03692 4edd783ac51f66773cb8b589f709a841 326 SUPERFAMILY SSF161098 89 303 6.76E-16 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_00879 2b338be9c280650678e268b04c0c98b9 602 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 123 569 2.0E-212 T 14-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 PhaeoP54_00879 2b338be9c280650678e268b04c0c98b9 602 Gene3D G3DSA:3.20.20.540 190 502 2.4E-154 T 14-10-2018 IPR038521 ThiC/Bza superfamily KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 PhaeoP54_00879 2b338be9c280650678e268b04c0c98b9 602 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 123 571 98.375 T 14-10-2018 IPR037509 Phosphomethylpyrimidine synthase GO:0009228|GO:0016830 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 PhaeoP54_00879 2b338be9c280650678e268b04c0c98b9 602 Pfam PF01964 Radical SAM ThiC family 124 566 4.0E-200 T 14-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 PhaeoP54_00879 2b338be9c280650678e268b04c0c98b9 602 Pfam PF13667 ThiC-associated domain 13 84 1.8E-27 T 14-10-2018 IPR025747 ThiC-associated domain KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 PhaeoP54_03928 00505fbeed9c9a21a17260a1f679d0bb 445 Gene3D G3DSA:3.50.50.60 42 402 4.0E-72 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PhaeoP54_03928 00505fbeed9c9a21a17260a1f679d0bb 445 Pfam PF01266 FAD dependent oxidoreductase 42 401 4.7E-46 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 PhaeoP54_03928 00505fbeed9c9a21a17260a1f679d0bb 445 SUPERFAMILY SSF51905 42 429 1.81E-42 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PhaeoP54_03928 00505fbeed9c9a21a17260a1f679d0bb 445 Gene3D G3DSA:3.30.9.10 135 362 4.0E-72 T 14-10-2018 PhaeoP54_00623 3f07d3d30cb57a1ad730ea8499eb3f86 215 Pfam PF07486 Cell Wall Hydrolase 95 204 3.9E-25 T 14-10-2018 IPR011105 Cell wall hydrolase, SleB GO:0016787 PhaeoP54_00623 3f07d3d30cb57a1ad730ea8499eb3f86 215 Gene3D G3DSA:1.10.10.2520 80 167 4.7E-21 T 14-10-2018 PhaeoP54_00684 77c3d08a156d0a587a7d918feb3421c8 394 SUPERFAMILY SSF51197 80 361 1.65E-47 T 14-10-2018 PhaeoP54_00684 77c3d08a156d0a587a7d918feb3421c8 394 Gene3D G3DSA:2.60.120.620 78 331 1.7E-36 T 14-10-2018 PhaeoP54_00684 77c3d08a156d0a587a7d918feb3421c8 394 Pfam PF05721 Phytanoyl-CoA dioxygenase (PhyH) 80 288 1.0E-29 T 14-10-2018 IPR008775 Phytanoyl-CoA dioxygenase PhaeoP54_00161 137798d4cfcfd1b0d6a835e3e70774f4 179 Pfam PF07690 Major Facilitator Superfamily 16 138 1.4E-9 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PhaeoP54_00161 137798d4cfcfd1b0d6a835e3e70774f4 179 SUPERFAMILY SSF103473 6 170 2.49E-16 T 14-10-2018 IPR036259 MFS transporter superfamily PhaeoP54_00161 137798d4cfcfd1b0d6a835e3e70774f4 179 Gene3D G3DSA:1.20.1250.20 4 179 2.3E-16 T 14-10-2018 PhaeoP54_01185 04a66c84b3013bf6027c9179e0952fa1 212 Gene3D G3DSA:3.40.30.10 1 79 4.2E-16 T 14-10-2018 PhaeoP54_01185 04a66c84b3013bf6027c9179e0952fa1 212 SUPERFAMILY SSF52833 2 81 1.19E-16 T 14-10-2018 IPR036249 Thioredoxin-like superfamily PhaeoP54_01185 04a66c84b3013bf6027c9179e0952fa1 212 SUPERFAMILY SSF47616 74 204 5.15E-28 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily PhaeoP54_01185 04a66c84b3013bf6027c9179e0952fa1 212 Gene3D G3DSA:1.20.1050.10 85 198 5.4E-27 T 14-10-2018 PhaeoP54_01185 04a66c84b3013bf6027c9179e0952fa1 212 Pfam PF00043 Glutathione S-transferase, C-terminal domain 118 195 1.9E-9 T 14-10-2018 IPR004046 Glutathione S-transferase, C-terminal PhaeoP54_01185 04a66c84b3013bf6027c9179e0952fa1 212 Pfam PF02798 Glutathione S-transferase, N-terminal domain 1 76 9.7E-8 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 PhaeoP54_04045 a4c0772f912a73bfa99baadd9f7e4c01 305 SUPERFAMILY SSF53448 4 226 1.69E-38 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PhaeoP54_04045 a4c0772f912a73bfa99baadd9f7e4c01 305 Pfam PF00535 Glycosyl transferase family 2 9 118 8.2E-24 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 PhaeoP54_04045 a4c0772f912a73bfa99baadd9f7e4c01 305 Gene3D G3DSA:3.90.550.10 2 227 6.7E-31 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PhaeoP54_01524 1246b0a1c75742bcb348f63adf64466c 507 Pfam PF01458 Uncharacterized protein family (UPF0051) 245 478 6.8E-71 T 14-10-2018 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 PhaeoP54_01524 1246b0a1c75742bcb348f63adf64466c 507 SUPERFAMILY SSF101960 48 504 3.92E-139 T 14-10-2018 IPR037284 SUF system FeS cluster assembly, SufBD superfamily PhaeoP54_01524 1246b0a1c75742bcb348f63adf64466c 507 TIGRFAM TIGR01980 sufB: FeS assembly protein SufB 28 498 7.2E-190 T 14-10-2018 IPR010231 SUF system FeS cluster assembly, SufB GO:0016226 PhaeoP54_03787 d791373761775166f30b700c4550fc58 184 Pfam PF03975 CheD chemotactic sensory transduction 57 148 6.0E-26 T 14-10-2018 IPR005659 Chemoreceptor glutamine deamidase CheD GO:0006935|GO:0050568 PhaeoP54_03787 d791373761775166f30b700c4550fc58 184 Hamap MF_01440 Chemoreceptor glutamine deamidase CheD [cheD]. 5 155 26.763 T 14-10-2018 IPR005659 Chemoreceptor glutamine deamidase CheD GO:0006935|GO:0050568 PhaeoP54_03787 d791373761775166f30b700c4550fc58 184 Gene3D G3DSA:3.30.1330.200 7 161 1.4E-47 T 14-10-2018 IPR038592 CheD-like superfamily PhaeoP54_03787 d791373761775166f30b700c4550fc58 184 SUPERFAMILY SSF64438 10 154 1.46E-46 T 14-10-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic PhaeoP54_02428 486a9c8574e1f25dc98e79453835ea99 245 Pfam PF09955 Predicted integral membrane protein (DUF2189) 95 177 1.9E-17 T 14-10-2018 IPR018692 Predicted integral membrane protein DUF2189 PhaeoP54_00844 bbdfbe1bde3da8611537cd097297f4b0 417 TIGRFAM TIGR01373 soxB: sarcosine oxidase, beta subunit family 2 406 4.2E-200 T 14-10-2018 IPR006278 Sarcosine oxidase subunit beta GO:0008115|GO:0046653|GO:0055114 KEGG: 00260+1.5.3.1|MetaCyc: PWY-3661|MetaCyc: PWY-4722 PhaeoP54_00844 bbdfbe1bde3da8611537cd097297f4b0 417 SUPERFAMILY SSF51905 31 402 3.79E-55 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PhaeoP54_00844 bbdfbe1bde3da8611537cd097297f4b0 417 Gene3D G3DSA:3.30.9.10 114 344 3.9E-107 T 14-10-2018 PhaeoP54_00844 bbdfbe1bde3da8611537cd097297f4b0 417 Gene3D G3DSA:3.50.50.60 33 387 3.9E-107 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PhaeoP54_00844 bbdfbe1bde3da8611537cd097297f4b0 417 SUPERFAMILY SSF54373 270 342 3.34E-7 T 14-10-2018 PhaeoP54_00844 bbdfbe1bde3da8611537cd097297f4b0 417 Pfam PF01266 FAD dependent oxidoreductase 33 379 5.6E-59 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 PhaeoP54_02895 2d47ae422e2aed00ade4c8dd0414ea3d 203 Gene3D G3DSA:3.40.50.1000 71 179 2.0E-64 T 14-10-2018 IPR023214 HAD superfamily PhaeoP54_02895 2d47ae422e2aed00ade4c8dd0414ea3d 203 SUPERFAMILY SSF56784 11 201 4.85E-22 T 14-10-2018 IPR036412 HAD-like superfamily PhaeoP54_02895 2d47ae422e2aed00ade4c8dd0414ea3d 203 Gene3D G3DSA:1.10.150.240 8 70 2.0E-64 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 PhaeoP54_03722 9a1d25542f2e00fb8fb5ce09a1fc7342 154 SUPERFAMILY SSF56784 6 153 2.67E-23 T 14-10-2018 IPR036412 HAD-like superfamily PhaeoP54_03722 9a1d25542f2e00fb8fb5ce09a1fc7342 154 Pfam PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) 8 131 2.6E-7 T 14-10-2018 IPR005519 Acid phosphatase, class B-like PhaeoP54_03722 9a1d25542f2e00fb8fb5ce09a1fc7342 154 Gene3D G3DSA:3.40.50.1000 8 154 9.7E-37 T 14-10-2018 IPR023214 HAD superfamily PhaeoP54_02222 61c8390a139a852e6fd1bb072542ed68 367 Gene3D G3DSA:3.10.270.10 91 348 1.8E-64 T 14-10-2018 PhaeoP54_02222 61c8390a139a852e6fd1bb072542ed68 367 Hamap MF_01527_B GTP cyclohydrolase FolE2 [folE2]. 76 347 30.291 T 14-10-2018 IPR022838 GTP cyclohydrolase FolE2 GO:0003934|GO:0035998 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852 PhaeoP54_02222 61c8390a139a852e6fd1bb072542ed68 367 Pfam PF02649 Type I GTP cyclohydrolase folE2 76 341 1.0E-67 T 14-10-2018 IPR003801 GTP cyclohydrolase FolE2/MptA GO:0003933 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852 PhaeoP54_03621 8e7ef505f402b181690ade4740df91a6 313 Gene3D G3DSA:1.10.3720.10 86 308 8.9E-31 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_03621 8e7ef505f402b181690ade4740df91a6 313 SUPERFAMILY SSF161098 93 294 8.11E-25 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_03621 8e7ef505f402b181690ade4740df91a6 313 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 117 311 1.5E-43 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PhaeoP54_02482 31658c85815403a56f6438794019c8a8 505 Pfam PF00005 ABC transporter 20 152 1.4E-19 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PhaeoP54_02482 31658c85815403a56f6438794019c8a8 505 SMART SM00382 322 495 6.6E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_02482 31658c85815403a56f6438794019c8a8 505 SMART SM00382 27 199 5.3E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_02482 31658c85815403a56f6438794019c8a8 505 SUPERFAMILY SSF52540 16 204 1.43E-35 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_02482 31658c85815403a56f6438794019c8a8 505 Gene3D G3DSA:3.40.50.300 2 241 1.3E-41 T 14-10-2018 PhaeoP54_02482 31658c85815403a56f6438794019c8a8 505 Gene3D G3DSA:3.40.50.300 261 501 4.1E-34 T 14-10-2018 PhaeoP54_02482 31658c85815403a56f6438794019c8a8 505 SUPERFAMILY SSF52540 292 500 2.02E-32 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_02482 31658c85815403a56f6438794019c8a8 505 Pfam PF00005 ABC transporter 320 442 1.3E-13 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PhaeoP54_02656 fb42e50d5cbd5aa5298c3f524288f95c 385 SUPERFAMILY SSF53335 127 380 1.1E-64 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PhaeoP54_02656 fb42e50d5cbd5aa5298c3f524288f95c 385 Gene3D G3DSA:3.40.50.150 125 385 6.0E-85 T 14-10-2018 PhaeoP54_02656 fb42e50d5cbd5aa5298c3f524288f95c 385 PIRSF PIRSF003085 5 385 4.0E-116 T 14-10-2018 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 PhaeoP54_02656 fb42e50d5cbd5aa5298c3f524288f95c 385 Pfam PF02353 Mycolic acid cyclopropane synthetase 120 380 4.5E-74 T 14-10-2018 PhaeoP54_00456 4583a1c647f2d66f621ac745e5e4a36e 559 SUPERFAMILY SSF50249 454 538 4.03E-17 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold PhaeoP54_00456 4583a1c647f2d66f621ac745e5e4a36e 559 PRINTS PR00681 Ribosomal protein S1 signature 131 148 2.6E-80 T 14-10-2018 PhaeoP54_00456 4583a1c647f2d66f621ac745e5e4a36e 559 PRINTS PR00681 Ribosomal protein S1 signature 26 44 2.6E-80 T 14-10-2018 PhaeoP54_00456 4583a1c647f2d66f621ac745e5e4a36e 559 PRINTS PR00681 Ribosomal protein S1 signature 295 314 2.6E-80 T 14-10-2018 PhaeoP54_00456 4583a1c647f2d66f621ac745e5e4a36e 559 PRINTS PR00681 Ribosomal protein S1 signature 335 353 2.6E-80 T 14-10-2018 PhaeoP54_00456 4583a1c647f2d66f621ac745e5e4a36e 559 PRINTS PR00681 Ribosomal protein S1 signature 217 238 2.6E-80 T 14-10-2018 PhaeoP54_00456 4583a1c647f2d66f621ac745e5e4a36e 559 PRINTS PR00681 Ribosomal protein S1 signature 113 129 2.6E-80 T 14-10-2018 PhaeoP54_00456 4583a1c647f2d66f621ac745e5e4a36e 559 PRINTS PR00681 Ribosomal protein S1 signature 160 180 2.6E-80 T 14-10-2018 PhaeoP54_00456 4583a1c647f2d66f621ac745e5e4a36e 559 PRINTS PR00681 Ribosomal protein S1 signature 44 58 2.6E-80 T 14-10-2018 PhaeoP54_00456 4583a1c647f2d66f621ac745e5e4a36e 559 PRINTS PR00681 Ribosomal protein S1 signature 89 108 2.6E-80 T 14-10-2018 PhaeoP54_00456 4583a1c647f2d66f621ac745e5e4a36e 559 SUPERFAMILY SSF50249 110 189 6.47E-12 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold PhaeoP54_00456 4583a1c647f2d66f621ac745e5e4a36e 559 Gene3D G3DSA:2.40.50.140 11 105 6.5E-17 T 14-10-2018 PhaeoP54_00456 4583a1c647f2d66f621ac745e5e4a36e 559 SUPERFAMILY SSF50249 12 117 1.04E-17 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold PhaeoP54_00456 4583a1c647f2d66f621ac745e5e4a36e 559 SUPERFAMILY SSF50249 352 441 2.24E-21 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold PhaeoP54_00456 4583a1c647f2d66f621ac745e5e4a36e 559 Gene3D G3DSA:2.40.50.140 193 273 4.3E-28 T 14-10-2018 PhaeoP54_00456 4583a1c647f2d66f621ac745e5e4a36e 559 TIGRFAM TIGR00717 rpsA: ribosomal protein bS1 8 524 4.8E-191 T 14-10-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 PhaeoP54_00456 4583a1c647f2d66f621ac745e5e4a36e 559 SUPERFAMILY SSF50249 195 279 6.01E-26 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold PhaeoP54_00456 4583a1c647f2d66f621ac745e5e4a36e 559 PIRSF PIRSF002111 1 538 5.9E-196 T 14-10-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 PhaeoP54_00456 4583a1c647f2d66f621ac745e5e4a36e 559 SUPERFAMILY SSF50249 279 374 1.57E-23 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold PhaeoP54_00456 4583a1c647f2d66f621ac745e5e4a36e 559 Pfam PF00575 S1 RNA binding domain 23 91 1.0E-9 T 14-10-2018 IPR003029 S1 domain GO:0003676 PhaeoP54_00456 4583a1c647f2d66f621ac745e5e4a36e 559 Pfam PF00575 S1 RNA binding domain 284 352 9.7E-18 T 14-10-2018 IPR003029 S1 domain GO:0003676 PhaeoP54_00456 4583a1c647f2d66f621ac745e5e4a36e 559 Pfam PF00575 S1 RNA binding domain 454 524 4.9E-15 T 14-10-2018 IPR003029 S1 domain GO:0003676 PhaeoP54_00456 4583a1c647f2d66f621ac745e5e4a36e 559 Pfam PF00575 S1 RNA binding domain 366 439 8.8E-21 T 14-10-2018 IPR003029 S1 domain GO:0003676 PhaeoP54_00456 4583a1c647f2d66f621ac745e5e4a36e 559 Pfam PF00575 S1 RNA binding domain 109 176 4.5E-9 T 14-10-2018 IPR003029 S1 domain GO:0003676 PhaeoP54_00456 4583a1c647f2d66f621ac745e5e4a36e 559 Pfam PF00575 S1 RNA binding domain 196 265 2.5E-20 T 14-10-2018 IPR003029 S1 domain GO:0003676 PhaeoP54_00456 4583a1c647f2d66f621ac745e5e4a36e 559 SMART SM00316 108 176 2.9E-4 T 14-10-2018 IPR022967 RNA-binding domain, S1 PhaeoP54_00456 4583a1c647f2d66f621ac745e5e4a36e 559 SMART SM00316 195 265 3.1E-26 T 14-10-2018 IPR022967 RNA-binding domain, S1 PhaeoP54_00456 4583a1c647f2d66f621ac745e5e4a36e 559 SMART SM00316 454 524 1.9E-15 T 14-10-2018 IPR022967 RNA-binding domain, S1 PhaeoP54_00456 4583a1c647f2d66f621ac745e5e4a36e 559 SMART SM00316 24 92 1.4E-9 T 14-10-2018 IPR022967 RNA-binding domain, S1 PhaeoP54_00456 4583a1c647f2d66f621ac745e5e4a36e 559 SMART SM00316 367 439 3.7E-20 T 14-10-2018 IPR022967 RNA-binding domain, S1 PhaeoP54_00456 4583a1c647f2d66f621ac745e5e4a36e 559 SMART SM00316 280 352 1.4E-22 T 14-10-2018 IPR022967 RNA-binding domain, S1 PhaeoP54_00456 4583a1c647f2d66f621ac745e5e4a36e 559 Gene3D G3DSA:2.40.50.140 274 362 6.5E-26 T 14-10-2018 PhaeoP54_00456 4583a1c647f2d66f621ac745e5e4a36e 559 Gene3D G3DSA:2.40.50.140 363 449 8.0E-22 T 14-10-2018 PhaeoP54_00456 4583a1c647f2d66f621ac745e5e4a36e 559 Gene3D G3DSA:2.40.50.140 450 532 1.1E-14 T 14-10-2018 PhaeoP54_03476 4d81dd0bc8a36cbb75c1ed398e3b75d5 206 Gene3D G3DSA:3.40.30.10 35 205 6.8E-51 T 14-10-2018 PhaeoP54_03476 4d81dd0bc8a36cbb75c1ed398e3b75d5 206 SUPERFAMILY SSF52833 46 204 1.85E-46 T 14-10-2018 IPR036249 Thioredoxin-like superfamily PhaeoP54_03476 4d81dd0bc8a36cbb75c1ed398e3b75d5 206 Pfam PF02630 SCO1/SenC 36 186 8.2E-40 T 14-10-2018 IPR003782 Copper chaperone SCO1/SenC Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PhaeoP54_00107 94771abd899389bafd957e1f291dbbb9 497 Gene3D G3DSA:3.50.50.60 158 276 4.9E-89 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PhaeoP54_00107 94771abd899389bafd957e1f291dbbb9 497 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 347 452 9.2E-27 T 14-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 PhaeoP54_00107 94771abd899389bafd957e1f291dbbb9 497 SUPERFAMILY SSF55424 345 462 7.04E-31 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 PhaeoP54_00107 94771abd899389bafd957e1f291dbbb9 497 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 327 2.9E-55 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PhaeoP54_00107 94771abd899389bafd957e1f291dbbb9 497 Gene3D G3DSA:3.50.50.60 6 331 4.9E-89 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PhaeoP54_00107 94771abd899389bafd957e1f291dbbb9 497 PIRSF PIRSF000350 1 462 4.4E-65 T 14-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 PhaeoP54_00107 94771abd899389bafd957e1f291dbbb9 497 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 178 203 3.6E-48 T 14-10-2018 PhaeoP54_00107 94771abd899389bafd957e1f291dbbb9 497 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 342 363 3.6E-48 T 14-10-2018 PhaeoP54_00107 94771abd899389bafd957e1f291dbbb9 497 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 263 277 3.6E-48 T 14-10-2018 PhaeoP54_00107 94771abd899389bafd957e1f291dbbb9 497 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 407 422 3.6E-48 T 14-10-2018 PhaeoP54_00107 94771abd899389bafd957e1f291dbbb9 497 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 3.6E-48 T 14-10-2018 PhaeoP54_00107 94771abd899389bafd957e1f291dbbb9 497 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 40 55 3.6E-48 T 14-10-2018 PhaeoP54_00107 94771abd899389bafd957e1f291dbbb9 497 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 307 314 3.6E-48 T 14-10-2018 PhaeoP54_00107 94771abd899389bafd957e1f291dbbb9 497 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 429 449 3.6E-48 T 14-10-2018 PhaeoP54_00107 94771abd899389bafd957e1f291dbbb9 497 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 142 151 3.6E-48 T 14-10-2018 PhaeoP54_00107 94771abd899389bafd957e1f291dbbb9 497 SUPERFAMILY SSF51905 6 380 1.38E-55 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PhaeoP54_00107 94771abd899389bafd957e1f291dbbb9 497 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 262 278 4.8E-27 T 14-10-2018 PhaeoP54_00107 94771abd899389bafd957e1f291dbbb9 497 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 292 314 4.8E-27 T 14-10-2018 PhaeoP54_00107 94771abd899389bafd957e1f291dbbb9 497 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 4.8E-27 T 14-10-2018 PhaeoP54_00107 94771abd899389bafd957e1f291dbbb9 497 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 139 157 4.8E-27 T 14-10-2018 PhaeoP54_00107 94771abd899389bafd957e1f291dbbb9 497 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 178 196 4.8E-27 T 14-10-2018 PhaeoP54_00107 94771abd899389bafd957e1f291dbbb9 497 Gene3D G3DSA:3.30.390.30 346 463 3.6E-29 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 PhaeoP54_03486 c7cf2d813b77cdb08aba9066f56ca2b2 320 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 5 22 2.4E-33 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 PhaeoP54_03486 c7cf2d813b77cdb08aba9066f56ca2b2 320 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 192 216 2.4E-33 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 PhaeoP54_03486 c7cf2d813b77cdb08aba9066f56ca2b2 320 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 167 191 2.4E-33 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 PhaeoP54_03486 c7cf2d813b77cdb08aba9066f56ca2b2 320 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 232 249 2.4E-33 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 PhaeoP54_03486 c7cf2d813b77cdb08aba9066f56ca2b2 320 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 53 80 2.4E-33 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 PhaeoP54_03486 c7cf2d813b77cdb08aba9066f56ca2b2 320 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 127 147 2.4E-33 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 PhaeoP54_03486 c7cf2d813b77cdb08aba9066f56ca2b2 320 PIRSF PIRSF000114 1 320 3.0E-88 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 PhaeoP54_03486 c7cf2d813b77cdb08aba9066f56ca2b2 320 SUPERFAMILY SSF48179 173 320 1.14E-43 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 PhaeoP54_03486 c7cf2d813b77cdb08aba9066f56ca2b2 320 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 2 153 1.7E-39 T 14-10-2018 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 PhaeoP54_03486 c7cf2d813b77cdb08aba9066f56ca2b2 320 Gene3D G3DSA:3.40.50.720 1 181 1.1E-49 T 14-10-2018 PhaeoP54_03486 c7cf2d813b77cdb08aba9066f56ca2b2 320 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 174 308 1.3E-39 T 14-10-2018 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 PhaeoP54_03486 c7cf2d813b77cdb08aba9066f56ca2b2 320 SUPERFAMILY SSF51735 1 174 2.16E-40 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PhaeoP54_03486 c7cf2d813b77cdb08aba9066f56ca2b2 320 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 182 203 - T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 PhaeoP54_03486 c7cf2d813b77cdb08aba9066f56ca2b2 320 Gene3D G3DSA:1.10.1040.10 183 320 1.8E-38 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 PhaeoP54_03486 c7cf2d813b77cdb08aba9066f56ca2b2 320 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 1 311 31.511 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 PhaeoP54_02331 b1378aa163b7be4572fad011060866c1 91 Pfam PF07330 Protein of unknown function (DUF1467) 1 82 9.3E-31 T 14-10-2018 IPR009935 Protein of unknown function DUF1467 PhaeoP54_03214 3e86c89a17efe8e3ef9c4fa4bb41e068 401 Gene3D G3DSA:1.10.3470.10 18 285 1.0E-7 T 14-10-2018 IPR037294 ABC transporter, BtuC-like PhaeoP54_03214 3e86c89a17efe8e3ef9c4fa4bb41e068 401 SUPERFAMILY SSF81345 18 279 1.83E-28 T 14-10-2018 IPR037294 ABC transporter, BtuC-like PhaeoP54_03214 3e86c89a17efe8e3ef9c4fa4bb41e068 401 Pfam PF00950 ABC 3 transport family 17 280 1.7E-56 T 14-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 PhaeoP54_02558 3cde2e45dd72aaeb1558deb001cb047b 671 Gene3D G3DSA:1.10.1370.40 17 664 3.4E-212 T 14-10-2018 PhaeoP54_02558 3cde2e45dd72aaeb1558deb001cb047b 671 Gene3D G3DSA:1.10.1370.10 144 599 3.4E-212 T 14-10-2018 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 PhaeoP54_02558 3cde2e45dd72aaeb1558deb001cb047b 671 Pfam PF01432 Peptidase family M3 226 667 4.9E-111 T 14-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 PhaeoP54_02558 3cde2e45dd72aaeb1558deb001cb047b 671 SUPERFAMILY SSF55486 1 667 9.16E-180 T 14-10-2018 PhaeoP54_01692 8b419fa2ae7579ab4d243ca232df3493 1139 Gene3D G3DSA:3.40.50.970 441 591 1.1E-5 T 14-10-2018 PhaeoP54_01692 8b419fa2ae7579ab4d243ca232df3493 1139 Gene3D G3DSA:3.40.920.10 711 913 7.8E-22 T 14-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 PhaeoP54_01692 8b419fa2ae7579ab4d243ca232df3493 1139 SUPERFAMILY SSF52518 18 225 3.0E-15 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold PhaeoP54_01692 8b419fa2ae7579ab4d243ca232df3493 1139 SUPERFAMILY SSF53323 713 912 1.7E-27 T 14-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 PhaeoP54_01692 8b419fa2ae7579ab4d243ca232df3493 1139 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 723 909 3.4E-21 T 14-10-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 PhaeoP54_01692 8b419fa2ae7579ab4d243ca232df3493 1139 SUPERFAMILY SSF52518 434 619 2.3E-14 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold PhaeoP54_01692 8b419fa2ae7579ab4d243ca232df3493 1139 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 455 560 3.1E-6 T 14-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 PhaeoP54_01692 8b419fa2ae7579ab4d243ca232df3493 1139 SUPERFAMILY SSF52922 265 350 8.48E-5 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 PhaeoP54_01692 8b419fa2ae7579ab4d243ca232df3493 1139 Gene3D G3DSA:3.40.50.970 5 223 9.7E-24 T 14-10-2018 PhaeoP54_01544 8dbc0401edc3891868b414c3a8803739 287 SUPERFAMILY SSF69593 38 271 2.75E-22 T 14-10-2018 PhaeoP54_01544 8dbc0401edc3891868b414c3a8803739 287 SMART SM00563 89 204 7.1E-22 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 PhaeoP54_01544 8dbc0401edc3891868b414c3a8803739 287 Pfam PF01553 Acyltransferase 90 201 2.6E-19 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 PhaeoP54_03118 8def24ea1934baf5c1f1d6e6791c1c4f 1151 Pfam PF02463 RecF/RecN/SMC N terminal domain 4 1136 1.6E-56 T 14-10-2018 IPR003395 RecF/RecN/SMC, N-terminal PhaeoP54_03118 8def24ea1934baf5c1f1d6e6791c1c4f 1151 SUPERFAMILY SSF52540 3 1139 1.49E-62 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_03118 8def24ea1934baf5c1f1d6e6791c1c4f 1151 Hamap MF_01894 Chromosome partition protein Smc [smc]. 1 1145 20.333 T 14-10-2018 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 PhaeoP54_03118 8def24ea1934baf5c1f1d6e6791c1c4f 1151 SUPERFAMILY SSF75553 468 621 3.53E-6 T 14-10-2018 IPR036277 SMCs flexible hinge superfamily GO:0005515|GO:0005524|GO:0005694|GO:0051276 PhaeoP54_03118 8def24ea1934baf5c1f1d6e6791c1c4f 1151 PIRSF PIRSF005719 575 1150 9.9E-110 T 14-10-2018 IPR024704 Structural maintenance of chromosomes protein PhaeoP54_03118 8def24ea1934baf5c1f1d6e6791c1c4f 1151 PIRSF PIRSF005719 1 541 3.7E-93 T 14-10-2018 IPR024704 Structural maintenance of chromosomes protein PhaeoP54_03118 8def24ea1934baf5c1f1d6e6791c1c4f 1151 Gene3D G3DSA:3.40.50.300 873 1151 1.0E-45 T 14-10-2018 PhaeoP54_03118 8def24ea1934baf5c1f1d6e6791c1c4f 1151 Gene3D G3DSA:3.40.50.300 1 253 3.0E-42 T 14-10-2018 PhaeoP54_00552 34409314ffdc0d6a5779f5750b5df0ea 430 Pfam PF07690 Major Facilitator Superfamily 45 376 1.6E-9 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PhaeoP54_00552 34409314ffdc0d6a5779f5750b5df0ea 430 Gene3D G3DSA:1.20.1250.20 227 416 7.3E-16 T 14-10-2018 PhaeoP54_00552 34409314ffdc0d6a5779f5750b5df0ea 430 SUPERFAMILY SSF103473 36 412 4.05E-31 T 14-10-2018 IPR036259 MFS transporter superfamily PhaeoP54_02671 9273f94127509df899792d15be6786b3 236 Pfam PF11748 Protein of unknown function (DUF3306) 7 106 3.0E-18 T 14-10-2018 IPR021735 Protein of unknown function DUF3306 PhaeoP54_01855 7a0685fb42aa7d5d315e688ff2c21c88 220 Gene3D G3DSA:3.30.40.60 128 218 2.6E-7 T 14-10-2018 PhaeoP54_01855 7a0685fb42aa7d5d315e688ff2c21c88 220 SMART SM00507 152 210 7.1E-7 T 14-10-2018 IPR003615 HNH nuclease PhaeoP54_01855 7a0685fb42aa7d5d315e688ff2c21c88 220 Pfam PF01844 HNH endonuclease 165 214 7.1E-13 T 14-10-2018 IPR002711 HNH endonuclease GO:0003676|GO:0004519 PhaeoP54_01501 9ee955591896a4353ad0f1857c615a8b 89 Pfam PF06233 Usg-like family 9 88 1.7E-40 T 14-10-2018 IPR009354 Usg-like PhaeoP54_02852 536ae567c2c2b88a043fdb1114e2eb47 644 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 321 454 1.7E-10 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 PhaeoP54_02852 536ae567c2c2b88a043fdb1114e2eb47 644 Gene3D G3DSA:3.40.50.300 269 469 1.1E-15 T 14-10-2018 PhaeoP54_02852 536ae567c2c2b88a043fdb1114e2eb47 644 SUPERFAMILY SSF52540 321 563 2.51E-16 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_02815 edc468715aea283b398424a85e41208a 191 Pfam PF02627 Carboxymuconolactone decarboxylase family 52 99 2.9E-10 T 14-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 PhaeoP54_02815 edc468715aea283b398424a85e41208a 191 Gene3D G3DSA:1.20.1290.10 68 191 9.3E-44 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 PhaeoP54_02815 edc468715aea283b398424a85e41208a 191 SUPERFAMILY SSF69118 9 186 2.62E-55 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 PhaeoP54_02815 edc468715aea283b398424a85e41208a 191 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 66 111 1.6E-11 T 14-10-2018 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 PhaeoP54_02815 edc468715aea283b398424a85e41208a 191 Gene3D G3DSA:1.20.5.810 16 66 1.0E-25 T 14-10-2018 PhaeoP54_02815 edc468715aea283b398424a85e41208a 191 TIGRFAM TIGR01926 peroxid_rel: uncharacterized peroxidase-related enzyme 10 184 6.4E-65 T 14-10-2018 IPR010195 Uncharacterised peroxidase-related PhaeoP54_00863 3cb1b9121e4f0a1811824a42248d6cc7 183 Gene3D G3DSA:3.40.50.960 11 157 2.6E-42 T 14-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 PhaeoP54_00863 3cb1b9121e4f0a1811824a42248d6cc7 183 SUPERFAMILY SSF52121 10 156 3.4E-45 T 14-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 PhaeoP54_00863 3cb1b9121e4f0a1811824a42248d6cc7 183 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 19 150 9.2E-27 T 14-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 PhaeoP54_00863 3cb1b9121e4f0a1811824a42248d6cc7 183 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 19 152 2.3E-37 T 14-10-2018 IPR002180 Lumazine/riboflavin synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 PhaeoP54_00863 3cb1b9121e4f0a1811824a42248d6cc7 183 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 14 155 20.326 T 14-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 PhaeoP54_02113 5f2d68a026c9eb25be991bbcda905401 230 SUPERFAMILY SSF56281 1 217 1.82E-32 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like PhaeoP54_02113 5f2d68a026c9eb25be991bbcda905401 230 Gene3D G3DSA:3.60.15.10 1 228 4.7E-49 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like PhaeoP54_02113 5f2d68a026c9eb25be991bbcda905401 230 Hamap MF_00457 UPF0173 metal-dependent hydrolase . 1 230 31.046 T 14-10-2018 IPR022877 Protein of unknown funcion UPF0173 PhaeoP54_02113 5f2d68a026c9eb25be991bbcda905401 230 SMART SM00849 7 196 5.4E-11 T 14-10-2018 IPR001279 Metallo-beta-lactamase PhaeoP54_02113 5f2d68a026c9eb25be991bbcda905401 230 Pfam PF13483 Beta-lactamase superfamily domain 2 185 2.4E-15 T 14-10-2018 PhaeoP54_00109 a7938bc9981131c69c4adc61d8812c56 312 Pfam PF03547 Membrane transport protein 7 145 2.6E-13 T 14-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 PhaeoP54_00109 a7938bc9981131c69c4adc61d8812c56 312 Pfam PF03547 Membrane transport protein 158 302 2.3E-17 T 14-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 PhaeoP54_00966 325720c3c861ffd863cc2984d6469bda 277 SUPERFAMILY SSF140959 21 277 1.96E-99 T 14-10-2018 IPR037217 Tryptophan/Indoleamine 2,3-dioxygenase-like GO:0019441|GO:0020037|GO:0046872 KEGG: 00380+1.13.11.11|Reactome: R-HSA-71240 PhaeoP54_00966 325720c3c861ffd863cc2984d6469bda 277 Gene3D G3DSA:1.20.58.480 19 277 2.0E-94 T 14-10-2018 PhaeoP54_00966 325720c3c861ffd863cc2984d6469bda 277 Hamap MF_01972 Tryptophan 2,3-dioxygenase [kynA]. 15 277 40.086 T 14-10-2018 IPR004981 Tryptophan 2,3-dioxygenase GO:0004833|GO:0019441|GO:0020037 KEGG: 00380+1.13.11.11|Reactome: R-HSA-71240 PhaeoP54_00966 325720c3c861ffd863cc2984d6469bda 277 TIGRFAM TIGR03036 trp_2_3_diox: tryptophan 2,3-dioxygenase 15 277 2.4E-123 T 14-10-2018 IPR017485 Tryptophan 2,3-dioxygenase, bacterial GO:0004833|GO:0019441 KEGG: 00380+1.13.11.11 PhaeoP54_00966 325720c3c861ffd863cc2984d6469bda 277 Pfam PF03301 Tryptophan 2,3-dioxygenase 13 277 1.0E-65 T 14-10-2018 IPR004981 Tryptophan 2,3-dioxygenase GO:0004833|GO:0019441|GO:0020037 KEGG: 00380+1.13.11.11|Reactome: R-HSA-71240 PhaeoP54_03949 c0fa463da89905b9cf958644e0fa6a6f 351 Pfam PF01261 Xylose isomerase-like TIM barrel 30 280 5.4E-34 T 14-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain PhaeoP54_03949 c0fa463da89905b9cf958644e0fa6a6f 351 Gene3D G3DSA:3.20.20.150 19 326 1.3E-65 T 14-10-2018 PhaeoP54_03949 c0fa463da89905b9cf958644e0fa6a6f 351 SUPERFAMILY SSF51658 9 324 2.88E-56 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily PhaeoP54_03949 c0fa463da89905b9cf958644e0fa6a6f 351 Pfam PF07582 AP endonuclease family 2 C terminus 281 335 3.9E-22 T 14-10-2018 IPR011418 AP endonuclease, family 2, C-terminal PhaeoP54_00081 23b20436207009b08b1fdd13c190ef76 1822 Pfam PF11974 Alpha-2-macroglobulin MG1 domain 487 592 4.8E-25 T 14-10-2018 PhaeoP54_00081 23b20436207009b08b1fdd13c190ef76 1822 SUPERFAMILY SSF48239 1362 1611 6.28E-45 T 14-10-2018 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid PhaeoP54_00081 23b20436207009b08b1fdd13c190ef76 1822 PIRSF PIRSF038980 52 1822 0.0 T 14-10-2018 IPR026284 Alpha-2-macroglobulin domain protein, bacteria PhaeoP54_00081 23b20436207009b08b1fdd13c190ef76 1822 Gene3D G3DSA:1.50.10.20 1362 1615 2.2E-21 T 14-10-2018 PhaeoP54_00081 23b20436207009b08b1fdd13c190ef76 1822 Pfam PF01835 MG2 domain 600 694 2.1E-15 T 14-10-2018 IPR002890 Alpha-2-macroglobulin, N-terminal GO:0004866 PhaeoP54_00081 23b20436207009b08b1fdd13c190ef76 1822 SMART SM01360 1164 1252 1.7E-23 T 14-10-2018 IPR001599 Alpha-2-macroglobulin GO:0004866 PhaeoP54_00081 23b20436207009b08b1fdd13c190ef76 1822 Gene3D G3DSA:3.50.4.10 33 104 2.5E-8 T 14-10-2018 PhaeoP54_00081 23b20436207009b08b1fdd13c190ef76 1822 Pfam PF00207 Alpha-2-macroglobulin family 1171 1238 1.6E-6 T 14-10-2018 IPR001599 Alpha-2-macroglobulin GO:0004866 PhaeoP54_00081 23b20436207009b08b1fdd13c190ef76 1822 SMART SM01359 957 1101 3.2E-31 T 14-10-2018 IPR011625 Alpha-2-macroglobulin, N-terminal 2 PhaeoP54_00081 23b20436207009b08b1fdd13c190ef76 1822 Pfam PF07703 Alpha-2-macroglobulin family N-terminal region 957 1101 9.8E-13 T 14-10-2018 IPR011625 Alpha-2-macroglobulin, N-terminal 2 PhaeoP54_01133 e8d952b4163cd5072197c6967e5eb66a 268 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 60 248 4.7E-16 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PhaeoP54_01133 e8d952b4163cd5072197c6967e5eb66a 268 SUPERFAMILY SSF161098 37 234 6.28E-30 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_01133 e8d952b4163cd5072197c6967e5eb66a 268 Gene3D G3DSA:1.10.3720.10 28 251 3.9E-39 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_01133 e8d952b4163cd5072197c6967e5eb66a 268 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 35 135 1.1E-12 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 PhaeoP54_02123 483199707af439ca33cfda51475793eb 223 Pfam PF00881 Nitroreductase family 13 198 4.8E-29 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 PhaeoP54_02123 483199707af439ca33cfda51475793eb 223 Gene3D G3DSA:3.40.109.10 2 219 3.7E-60 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 PhaeoP54_02123 483199707af439ca33cfda51475793eb 223 SUPERFAMILY SSF55469 8 221 5.63E-39 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 PhaeoP54_04078 74dec02e4622ef1cac3138509fc94be7 399 SMART SM00421 332 389 2.5E-8 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PhaeoP54_04078 74dec02e4622ef1cac3138509fc94be7 399 Gene3D G3DSA:1.10.10.10 275 395 3.6E-11 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_04078 74dec02e4622ef1cac3138509fc94be7 399 Pfam PF00196 Bacterial regulatory proteins, luxR family 335 387 4.3E-8 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PhaeoP54_04078 74dec02e4622ef1cac3138509fc94be7 399 SUPERFAMILY SSF46894 325 389 4.42E-11 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PhaeoP54_00339 dfb42b60bdf75d0dcf4684894a4fae08 182 Pfam PF07298 NnrU protein 4 177 8.8E-36 T 14-10-2018 IPR009915 NnrU domain PhaeoP54_01069 5ae059574fe786b093cb4991b2318659 421 PIRSF PIRSF010256 6 405 4.6E-121 T 14-10-2018 IPR011195 Uncharacterised conserved protein UCP010256 PhaeoP54_01069 5ae059574fe786b093cb4991b2318659 421 SMART SM00327 227 396 0.0076 T 14-10-2018 IPR002035 von Willebrand factor, type A PhaeoP54_01069 5ae059574fe786b093cb4991b2318659 421 Gene3D G3DSA:3.40.50.410 228 358 2.6E-7 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily PhaeoP54_01069 5ae059574fe786b093cb4991b2318659 421 SUPERFAMILY SSF53300 228 360 3.94E-16 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily PhaeoP54_01069 5ae059574fe786b093cb4991b2318659 421 Pfam PF05762 VWA domain containing CoxE-like protein 173 394 8.2E-71 T 14-10-2018 IPR008912 Uncharacterised protein family CoxE-like PhaeoP54_01986 31e28a075da93425d3a9d3da1b303007 259 Gene3D G3DSA:3.40.50.620 18 255 1.5E-62 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PhaeoP54_01986 31e28a075da93425d3a9d3da1b303007 259 SUPERFAMILY SSF52402 27 213 2.81E-46 T 14-10-2018 PhaeoP54_01986 31e28a075da93425d3a9d3da1b303007 259 PIRSF PIRSF000857 6 254 2.4E-80 T 14-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 PhaeoP54_01986 31e28a075da93425d3a9d3da1b303007 259 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 53 225 7.2E-38 T 14-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 PhaeoP54_01986 31e28a075da93425d3a9d3da1b303007 259 TIGRFAM TIGR00434 cysH: phosophoadenylyl-sulfate reductase 46 248 1.5E-49 T 14-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 PhaeoP54_00825 50f7ba9df65bd3d43b2db0229c87899b 229 Gene3D G3DSA:1.10.150.240 18 97 3.3E-32 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 PhaeoP54_00825 50f7ba9df65bd3d43b2db0229c87899b 229 Pfam PF13419 Haloacid dehalogenase-like hydrolase 6 199 4.5E-18 T 14-10-2018 PhaeoP54_00825 50f7ba9df65bd3d43b2db0229c87899b 229 Gene3D G3DSA:3.40.50.1000 7 216 3.3E-32 T 14-10-2018 IPR023214 HAD superfamily PhaeoP54_00825 50f7ba9df65bd3d43b2db0229c87899b 229 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 94 193 2.8E-8 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 PhaeoP54_00825 50f7ba9df65bd3d43b2db0229c87899b 229 SUPERFAMILY SSF56784 1 228 4.07E-43 T 14-10-2018 IPR036412 HAD-like superfamily PhaeoP54_02041 7597f3ba76f2d75d9d91d48036cc1c3e 294 SUPERFAMILY SSF53850 94 289 3.72E-27 T 14-10-2018 PhaeoP54_02041 7597f3ba76f2d75d9d91d48036cc1c3e 294 Gene3D G3DSA:3.40.190.290 96 286 3.9E-24 T 14-10-2018 PhaeoP54_02041 7597f3ba76f2d75d9d91d48036cc1c3e 294 Gene3D G3DSA:1.10.10.10 7 90 1.1E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_02041 7597f3ba76f2d75d9d91d48036cc1c3e 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 14 67 5.6E-16 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PhaeoP54_02041 7597f3ba76f2d75d9d91d48036cc1c3e 294 SUPERFAMILY SSF46785 6 109 1.03E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_02041 7597f3ba76f2d75d9d91d48036cc1c3e 294 Pfam PF03466 LysR substrate binding domain 94 285 2.6E-22 T 14-10-2018 IPR005119 LysR, substrate-binding PhaeoP54_00484 e571c3120b0dc7a6856638c39cf8bda4 416 SUPERFAMILY SSF51905 3 416 2.46E-40 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PhaeoP54_00484 e571c3120b0dc7a6856638c39cf8bda4 416 Gene3D G3DSA:3.50.50.60 114 399 3.5E-46 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PhaeoP54_00484 e571c3120b0dc7a6856638c39cf8bda4 416 SUPERFAMILY SSF54373 274 359 1.19E-11 T 14-10-2018 PhaeoP54_00484 e571c3120b0dc7a6856638c39cf8bda4 416 Pfam PF01266 FAD dependent oxidoreductase 5 398 9.6E-54 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 PhaeoP54_00484 e571c3120b0dc7a6856638c39cf8bda4 416 Gene3D G3DSA:3.50.50.60 5 53 1.3E-7 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PhaeoP54_00484 e571c3120b0dc7a6856638c39cf8bda4 416 Gene3D G3DSA:3.30.9.10 139 358 3.5E-46 T 14-10-2018 PhaeoP54_01317 60635c6782f3dc68f71a344268374b4d 338 Pfam PF02574 Homocysteine S-methyltransferase 15 293 1.6E-48 T 14-10-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 PhaeoP54_01317 60635c6782f3dc68f71a344268374b4d 338 Gene3D G3DSA:3.20.20.330 2 303 1.2E-75 T 14-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 PhaeoP54_01317 60635c6782f3dc68f71a344268374b4d 338 PIRSF PIRSF037505 29 335 9.2E-11 T 14-10-2018 IPR017226 Betaine-homocysteine S-methyltransferase, BHMT GO:0005737|GO:0008270|GO:0009086|GO:0047150 Reactome: R-HSA-1614635 PhaeoP54_01317 60635c6782f3dc68f71a344268374b4d 338 SUPERFAMILY SSF82282 5 322 1.96E-90 T 14-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 PhaeoP54_01125 524e7ff6e87c8cb9066c65847616ae21 149 SUPERFAMILY SSF55729 7 144 1.8E-20 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase PhaeoP54_01125 524e7ff6e87c8cb9066c65847616ae21 149 Pfam PF00583 Acetyltransferase (GNAT) family 59 134 9.1E-9 T 14-10-2018 IPR000182 GNAT domain PhaeoP54_01125 524e7ff6e87c8cb9066c65847616ae21 149 Gene3D G3DSA:3.40.630.30 1 148 2.8E-27 T 14-10-2018 PhaeoP54_03138 88b6ea7593d5df6ca836d8ad5d84a288 200 Pfam PF13302 Acetyltransferase (GNAT) domain 12 147 9.3E-20 T 14-10-2018 IPR000182 GNAT domain PhaeoP54_03138 88b6ea7593d5df6ca836d8ad5d84a288 200 Gene3D G3DSA:3.40.630.30 1 170 1.2E-33 T 14-10-2018 PhaeoP54_03138 88b6ea7593d5df6ca836d8ad5d84a288 200 SUPERFAMILY SSF55729 5 150 8.69E-28 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase PhaeoP54_00231 526301f237bcb2b84bb30875304fcf7e 255 SUPERFAMILY SSF52540 3 251 2.83E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_00231 526301f237bcb2b84bb30875304fcf7e 255 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 230 251 6.0E-13 T 14-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal PhaeoP54_00231 526301f237bcb2b84bb30875304fcf7e 255 SMART SM00382 28 229 9.2E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_00231 526301f237bcb2b84bb30875304fcf7e 255 Gene3D G3DSA:3.40.50.300 2 253 1.5E-60 T 14-10-2018 PhaeoP54_00231 526301f237bcb2b84bb30875304fcf7e 255 Pfam PF00005 ABC transporter 20 179 3.0E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PhaeoP54_02571 9ce32092e3f041605e60c7ac6c81e8d0 134 SUPERFAMILY SSF52980 23 130 7.29E-16 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 PhaeoP54_02571 9ce32092e3f041605e60c7ac6c81e8d0 134 Gene3D G3DSA:3.40.1350.10 28 133 8.0E-26 T 14-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 PhaeoP54_02571 9ce32092e3f041605e60c7ac6c81e8d0 134 Pfam PF02021 Uncharacterised protein family UPF0102 29 118 8.6E-19 T 14-10-2018 IPR003509 Uncharacterised protein family UPF0102 PhaeoP54_02571 9ce32092e3f041605e60c7ac6c81e8d0 134 Hamap MF_00048 UPF0102 protein YraN [yraN]. 22 131 16.617 T 14-10-2018 IPR003509 Uncharacterised protein family UPF0102 PhaeoP54_02874 f3ebc923894a41f279de05943b8b7c24 325 Pfam PF10094 Uncharacterized protein conserved in bacteria (DUF2332) 6 319 1.0E-72 T 14-10-2018 IPR011200 Uncharacterised conserved protein UCP012608 PhaeoP54_02564 f9fce3dd36d3d384afbec528dd199a24 312 Gene3D G3DSA:1.10.8.760 163 228 7.0E-18 T 14-10-2018 PhaeoP54_02564 f9fce3dd36d3d384afbec528dd199a24 312 Gene3D G3DSA:3.40.50.11550 69 276 7.0E-18 T 14-10-2018 PhaeoP54_02564 f9fce3dd36d3d384afbec528dd199a24 312 SUPERFAMILY SSF159501 62 297 3.66E-51 T 14-10-2018 PhaeoP54_02564 f9fce3dd36d3d384afbec528dd199a24 312 Pfam PF04187 Haem-binding uptake, Tiki superfamily, ChaN 70 268 4.6E-41 T 14-10-2018 IPR007314 Haem-binding uptake, Tiki superfamily, ChaN PhaeoP54_01721 7fc02033f3e4a22235105ea1325cc3d7 164 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 4 161 1.6E-57 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 PhaeoP54_01721 7fc02033f3e4a22235105ea1325cc3d7 164 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 117 139 1.3E-32 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 PhaeoP54_01721 7fc02033f3e4a22235105ea1325cc3d7 164 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 2 20 1.3E-32 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 PhaeoP54_01721 7fc02033f3e4a22235105ea1325cc3d7 164 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 90 106 1.3E-32 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 PhaeoP54_01721 7fc02033f3e4a22235105ea1325cc3d7 164 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 20 41 1.3E-32 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 PhaeoP54_01721 7fc02033f3e4a22235105ea1325cc3d7 164 SUPERFAMILY SSF52374 1 160 2.2E-41 T 14-10-2018 PhaeoP54_01721 7fc02033f3e4a22235105ea1325cc3d7 164 Pfam PF01467 Cytidylyltransferase-like 5 138 1.1E-17 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 PhaeoP54_01721 7fc02033f3e4a22235105ea1325cc3d7 164 Gene3D G3DSA:3.40.50.620 1 164 3.2E-52 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PhaeoP54_01721 7fc02033f3e4a22235105ea1325cc3d7 164 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 3 57 8.0E-19 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 PhaeoP54_01721 7fc02033f3e4a22235105ea1325cc3d7 164 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 2 163 32.654 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 PhaeoP54_00318 2b4fee19ed230b44095a682e6d6f6b4a 456 TIGRFAM TIGR00838 argH: argininosuccinate lyase 1 452 1.4E-181 T 14-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 PhaeoP54_00318 2b4fee19ed230b44095a682e6d6f6b4a 456 SUPERFAMILY SSF48557 4 455 3.93E-146 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 PhaeoP54_00318 2b4fee19ed230b44095a682e6d6f6b4a 456 Pfam PF00206 Lyase 4 298 1.5E-80 T 14-10-2018 IPR022761 Fumarate lyase, N-terminal PhaeoP54_00318 2b4fee19ed230b44095a682e6d6f6b4a 456 Gene3D G3DSA:1.20.200.10 117 447 6.3E-186 T 14-10-2018 PhaeoP54_00318 2b4fee19ed230b44095a682e6d6f6b4a 456 ProSitePatterns PS00163 Fumarate lyases signature. 273 282 - T 14-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 PhaeoP54_00318 2b4fee19ed230b44095a682e6d6f6b4a 456 Pfam PF14698 Argininosuccinate lyase C-terminal 361 430 7.9E-24 T 14-10-2018 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 PhaeoP54_00318 2b4fee19ed230b44095a682e6d6f6b4a 456 PRINTS PR00145 Argininosuccinate lyase family signature 99 121 1.1E-68 T 14-10-2018 PhaeoP54_00318 2b4fee19ed230b44095a682e6d6f6b4a 456 PRINTS PR00145 Argininosuccinate lyase family signature 191 207 1.1E-68 T 14-10-2018 PhaeoP54_00318 2b4fee19ed230b44095a682e6d6f6b4a 456 PRINTS PR00145 Argininosuccinate lyase family signature 273 289 1.1E-68 T 14-10-2018 PhaeoP54_00318 2b4fee19ed230b44095a682e6d6f6b4a 456 PRINTS PR00145 Argininosuccinate lyase family signature 308 327 1.1E-68 T 14-10-2018 PhaeoP54_00318 2b4fee19ed230b44095a682e6d6f6b4a 456 PRINTS PR00145 Argininosuccinate lyase family signature 229 253 1.1E-68 T 14-10-2018 PhaeoP54_00318 2b4fee19ed230b44095a682e6d6f6b4a 456 PRINTS PR00145 Argininosuccinate lyase family signature 140 160 1.1E-68 T 14-10-2018 PhaeoP54_00318 2b4fee19ed230b44095a682e6d6f6b4a 456 Gene3D G3DSA:1.10.275.10 23 227 6.3E-186 T 14-10-2018 IPR024083 Fumarase/histidase, N-terminal PhaeoP54_00318 2b4fee19ed230b44095a682e6d6f6b4a 456 Gene3D G3DSA:1.10.40.30 358 431 6.3E-186 T 14-10-2018 PhaeoP54_00318 2b4fee19ed230b44095a682e6d6f6b4a 456 Hamap MF_00006 Argininosuccinate lyase [argH]. 1 452 41.252 T 14-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 PhaeoP54_00318 2b4fee19ed230b44095a682e6d6f6b4a 456 PRINTS PR00149 Fumarate lyase superfamily signature 100 118 1.3E-29 T 14-10-2018 IPR000362 Fumarate lyase family PhaeoP54_00318 2b4fee19ed230b44095a682e6d6f6b4a 456 PRINTS PR00149 Fumarate lyase superfamily signature 273 289 1.3E-29 T 14-10-2018 IPR000362 Fumarate lyase family PhaeoP54_00318 2b4fee19ed230b44095a682e6d6f6b4a 456 PRINTS PR00149 Fumarate lyase superfamily signature 229 256 1.3E-29 T 14-10-2018 IPR000362 Fumarate lyase family PhaeoP54_00318 2b4fee19ed230b44095a682e6d6f6b4a 456 PRINTS PR00149 Fumarate lyase superfamily signature 145 163 1.3E-29 T 14-10-2018 IPR000362 Fumarate lyase family PhaeoP54_00925 d47281bbb5f1c7a163d92f892a52866f 304 Pfam PF04960 Glutaminase 23 304 1.1E-106 T 14-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 PhaeoP54_00925 d47281bbb5f1c7a163d92f892a52866f 304 Gene3D G3DSA:3.40.710.10 1 304 3.4E-103 T 14-10-2018 PhaeoP54_00925 d47281bbb5f1c7a163d92f892a52866f 304 Hamap MF_00313 Glutaminase [glsA]. 5 304 43.102 T 14-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 PhaeoP54_00925 d47281bbb5f1c7a163d92f892a52866f 304 SUPERFAMILY SSF56601 4 304 5.06E-102 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like PhaeoP54_00925 d47281bbb5f1c7a163d92f892a52866f 304 TIGRFAM TIGR03814 Gln_ase: glutaminase A 9 304 4.4E-116 T 14-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 PhaeoP54_01624 d07c69329dee7880867113fdcf5a50c7 188 Pfam PF14279 HNH endonuclease 92 137 2.2E-14 T 14-10-2018 IPR029471 HNH endonuclease 5 PhaeoP54_01624 d07c69329dee7880867113fdcf5a50c7 188 SMART SM00507 80 132 5.1E-9 T 14-10-2018 IPR003615 HNH nuclease PhaeoP54_01624 d07c69329dee7880867113fdcf5a50c7 188 Gene3D G3DSA:3.30.40.60 58 161 1.1E-20 T 14-10-2018 PhaeoP54_02526 4e4d70d1b4961b0ba4fb175e1fa68072 555 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PhaeoP54_02526 4e4d70d1b4961b0ba4fb175e1fa68072 555 Gene3D G3DSA:3.40.50.300 3 285 1.6E-76 T 14-10-2018 PhaeoP54_02526 4e4d70d1b4961b0ba4fb175e1fa68072 555 SMART SM00382 348 517 6.3E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_02526 4e4d70d1b4961b0ba4fb175e1fa68072 555 SMART SM00382 33 242 4.7E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_02526 4e4d70d1b4961b0ba4fb175e1fa68072 555 TIGRFAM TIGR03719 ABC_ABC_ChvD: ATP-binding cassette protein, ChvD family 5 552 1.0E-286 T 14-10-2018 IPR022374 Energy-dependent translational throttle protein EttA GO:0045900 PhaeoP54_02526 4e4d70d1b4961b0ba4fb175e1fa68072 555 Pfam PF12848 ABC transporter 230 297 1.7E-12 T 14-10-2018 IPR032781 ABC-transporter extension domain PhaeoP54_02526 4e4d70d1b4961b0ba4fb175e1fa68072 555 Pfam PF00005 ABC transporter 340 473 3.6E-23 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PhaeoP54_02526 4e4d70d1b4961b0ba4fb175e1fa68072 555 SUPERFAMILY SSF52540 308 522 2.49E-46 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_02526 4e4d70d1b4961b0ba4fb175e1fa68072 555 SUPERFAMILY SSF52540 17 242 6.09E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_02526 4e4d70d1b4961b0ba4fb175e1fa68072 555 Gene3D G3DSA:3.40.50.300 286 555 3.0E-72 T 14-10-2018 PhaeoP54_02526 4e4d70d1b4961b0ba4fb175e1fa68072 555 Pfam PF00005 ABC transporter 25 191 5.8E-26 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PhaeoP54_01749 188b8f39ac81be937135f9fc42063693 337 Pfam PF00676 Dehydrogenase E1 component 23 320 3.9E-103 T 14-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 PhaeoP54_01749 188b8f39ac81be937135f9fc42063693 337 TIGRFAM TIGR03182 PDH_E1_alph_y: pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit 15 329 6.1E-157 T 14-10-2018 IPR017597 Pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit, subgroup y GO:0004739|GO:0006086|GO:0043231 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-70268 PhaeoP54_01749 188b8f39ac81be937135f9fc42063693 337 Gene3D G3DSA:3.40.50.970 2 337 1.6E-138 T 14-10-2018 PhaeoP54_01749 188b8f39ac81be937135f9fc42063693 337 SUPERFAMILY SSF52518 10 330 4.57E-110 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold PhaeoP54_00141 b2278c7d5902726940cc52713ec57933 797 Pfam PF11329 Protein of unknown function (DUF3131) 432 793 9.2E-81 T 14-10-2018 IPR021478 Protein of unknown function DUF3131 PhaeoP54_03758 2148579f1541ddcb43c51718a35dbdf3 514 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 20 505 2.1E-140 T 14-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 PhaeoP54_04003 57e9b01d3e9eeaccbe0e2db984dc07e9 235 PIRSF PIRSF009320 6 226 1.0E-29 T 14-10-2018 PhaeoP54_04003 57e9b01d3e9eeaccbe0e2db984dc07e9 235 Pfam PF07015 VirC1 protein 6 231 2.2E-24 T 14-10-2018 IPR009744 VirC1 PhaeoP54_04003 57e9b01d3e9eeaccbe0e2db984dc07e9 235 ProDom PD023318 PLASMID VIRC1 CROWN TUMOR GALL TIORF154 RIORF166 78 228 4.0E-5 T 14-10-2018 PhaeoP54_04003 57e9b01d3e9eeaccbe0e2db984dc07e9 235 Gene3D G3DSA:3.40.50.300 6 227 6.8E-28 T 14-10-2018 PhaeoP54_04003 57e9b01d3e9eeaccbe0e2db984dc07e9 235 SUPERFAMILY SSF52540 6 206 9.15E-22 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_02617 251443d647ed7e34b71f21338eeef191 198 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 31 190 1.1E-15 T 14-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ PhaeoP54_02997 d7a157587a3183ba9f0d920aed6907e6 222 Pfam PF13419 Haloacid dehalogenase-like hydrolase 8 190 9.4E-29 T 14-10-2018 PhaeoP54_02997 d7a157587a3183ba9f0d920aed6907e6 222 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 132 190 7.0E-9 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 PhaeoP54_02997 d7a157587a3183ba9f0d920aed6907e6 222 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 89 184 3.4E-8 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 PhaeoP54_02997 d7a157587a3183ba9f0d920aed6907e6 222 Gene3D G3DSA:1.10.150.240 20 88 7.8E-47 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 PhaeoP54_02997 d7a157587a3183ba9f0d920aed6907e6 222 Gene3D G3DSA:3.40.50.1000 8 206 7.8E-47 T 14-10-2018 IPR023214 HAD superfamily PhaeoP54_02997 d7a157587a3183ba9f0d920aed6907e6 222 SUPERFAMILY SSF56784 5 219 6.96E-51 T 14-10-2018 IPR036412 HAD-like superfamily PhaeoP54_01869 c19da0bce71ba781ecc8ad788e896607 70 Pfam PF11127 Protein of unknown function (DUF2892) 1 69 3.6E-18 T 14-10-2018 IPR021309 Protein of unknown function DUF2892 PhaeoP54_02416 b687d502129011a421972f3e40a15949 275 ProSitePatterns PS01006 Formate and nitrite transporters signature 2. 160 170 - T 14-10-2018 IPR024002 Formate/nitrite transporter, conserved site PhaeoP54_02416 b687d502129011a421972f3e40a15949 275 Pfam PF01226 Formate/nitrite transporter 11 250 2.2E-58 T 14-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 PhaeoP54_02416 b687d502129011a421972f3e40a15949 275 Gene3D G3DSA:1.20.1080.10 2 264 2.3E-73 T 14-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 PhaeoP54_03937 b71d8c5bc9d600a46a2e14bb20ca9e95 460 SUPERFAMILY SSF51905 4 368 6.91E-66 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PhaeoP54_03937 b71d8c5bc9d600a46a2e14bb20ca9e95 460 PIRSF PIRSF000350 1 456 1.7E-87 T 14-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 PhaeoP54_03937 b71d8c5bc9d600a46a2e14bb20ca9e95 460 SUPERFAMILY SSF55424 338 459 1.34E-37 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 PhaeoP54_03937 b71d8c5bc9d600a46a2e14bb20ca9e95 460 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 170 188 1.3E-40 T 14-10-2018 PhaeoP54_03937 b71d8c5bc9d600a46a2e14bb20ca9e95 460 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 1.3E-40 T 14-10-2018 PhaeoP54_03937 b71d8c5bc9d600a46a2e14bb20ca9e95 460 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 131 149 1.3E-40 T 14-10-2018 PhaeoP54_03937 b71d8c5bc9d600a46a2e14bb20ca9e95 460 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 259 275 1.3E-40 T 14-10-2018 PhaeoP54_03937 b71d8c5bc9d600a46a2e14bb20ca9e95 460 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 288 310 1.3E-40 T 14-10-2018 PhaeoP54_03937 b71d8c5bc9d600a46a2e14bb20ca9e95 460 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 342 449 1.3E-33 T 14-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 PhaeoP54_03937 b71d8c5bc9d600a46a2e14bb20ca9e95 460 Gene3D G3DSA:3.30.390.30 341 460 1.5E-40 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 PhaeoP54_03937 b71d8c5bc9d600a46a2e14bb20ca9e95 460 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 4 459 4.8E-163 T 14-10-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 PhaeoP54_03937 b71d8c5bc9d600a46a2e14bb20ca9e95 460 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 170 195 5.0E-79 T 14-10-2018 PhaeoP54_03937 b71d8c5bc9d600a46a2e14bb20ca9e95 460 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 260 274 5.0E-79 T 14-10-2018 PhaeoP54_03937 b71d8c5bc9d600a46a2e14bb20ca9e95 460 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 5.0E-79 T 14-10-2018 PhaeoP54_03937 b71d8c5bc9d600a46a2e14bb20ca9e95 460 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 424 444 5.0E-79 T 14-10-2018 PhaeoP54_03937 b71d8c5bc9d600a46a2e14bb20ca9e95 460 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 38 53 5.0E-79 T 14-10-2018 PhaeoP54_03937 b71d8c5bc9d600a46a2e14bb20ca9e95 460 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 303 310 5.0E-79 T 14-10-2018 PhaeoP54_03937 b71d8c5bc9d600a46a2e14bb20ca9e95 460 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 338 359 5.0E-79 T 14-10-2018 PhaeoP54_03937 b71d8c5bc9d600a46a2e14bb20ca9e95 460 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 134 143 5.0E-79 T 14-10-2018 PhaeoP54_03937 b71d8c5bc9d600a46a2e14bb20ca9e95 460 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 402 417 5.0E-79 T 14-10-2018 PhaeoP54_03937 b71d8c5bc9d600a46a2e14bb20ca9e95 460 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 39 49 - T 14-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 PhaeoP54_03937 b71d8c5bc9d600a46a2e14bb20ca9e95 460 Gene3D G3DSA:3.50.50.60 146 269 1.2E-118 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PhaeoP54_03937 b71d8c5bc9d600a46a2e14bb20ca9e95 460 Gene3D G3DSA:3.50.50.60 4 328 1.2E-118 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PhaeoP54_03937 b71d8c5bc9d600a46a2e14bb20ca9e95 460 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 4 323 2.7E-73 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PhaeoP54_00594 639c5791b5b0264ccae72d3981ddaf23 412 Gene3D G3DSA:1.10.10.10 322 394 2.2E-9 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_00594 639c5791b5b0264ccae72d3981ddaf23 412 Pfam PF02481 DNA recombination-mediator protein A 83 286 4.7E-72 T 14-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 PhaeoP54_00594 639c5791b5b0264ccae72d3981ddaf23 412 SUPERFAMILY SSF102405 91 295 3.82E-44 T 14-10-2018 PhaeoP54_00594 639c5791b5b0264ccae72d3981ddaf23 412 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 82 295 1.7E-68 T 14-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 PhaeoP54_00594 639c5791b5b0264ccae72d3981ddaf23 412 Gene3D G3DSA:3.40.50.450 6 298 5.0E-103 T 14-10-2018 PhaeoP54_01975 3e3bd09910df0753eac1e1e17088e11b 467 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 17 260 3.8E-82 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 PhaeoP54_01975 3e3bd09910df0753eac1e1e17088e11b 467 PIRSF PIRSF006066 1 269 6.7E-85 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 PhaeoP54_01975 3e3bd09910df0753eac1e1e17088e11b 467 PIRSF PIRSF006066 285 461 3.8E-49 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 PhaeoP54_01975 3e3bd09910df0753eac1e1e17088e11b 467 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 8 451 1.5E-104 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit PhaeoP54_00537 daa4f8c4ed141531f5eac2308f5ea3d6 481 Pfam PF04317 YcjX-like family, DUF463 40 481 3.1E-166 T 14-10-2018 IPR007413 Protein of unknown function DUF463, YcjX-like protein PhaeoP54_00537 daa4f8c4ed141531f5eac2308f5ea3d6 481 PIRSF PIRSF019381 15 481 5.6E-164 T 14-10-2018 IPR007413 Protein of unknown function DUF463, YcjX-like protein PhaeoP54_01637 7c35c09fbe8a6291fa56c48b9f9a7066 256 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 229 251 1.6E-9 T 14-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal PhaeoP54_01637 7c35c09fbe8a6291fa56c48b9f9a7066 256 SMART SM00382 35 229 8.1E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_01637 7c35c09fbe8a6291fa56c48b9f9a7066 256 Gene3D G3DSA:3.40.50.300 1 254 9.7E-58 T 14-10-2018 PhaeoP54_01637 7c35c09fbe8a6291fa56c48b9f9a7066 256 SUPERFAMILY SSF52540 9 252 2.27E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_01637 7c35c09fbe8a6291fa56c48b9f9a7066 256 Pfam PF00005 ABC transporter 27 182 1.1E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PhaeoP54_00330 2814ede1208f185077b729f40fb93cf4 516 SUPERFAMILY SSF51230 1 94 1.44E-29 T 14-10-2018 IPR011053 Single hybrid motif PhaeoP54_00330 2814ede1208f185077b729f40fb93cf4 516 Pfam PF00364 Biotin-requiring enzyme 108 179 8.7E-21 T 14-10-2018 IPR000089 Biotin/lipoyl attachment PhaeoP54_00330 2814ede1208f185077b729f40fb93cf4 516 Pfam PF00364 Biotin-requiring enzyme 4 76 2.6E-23 T 14-10-2018 IPR000089 Biotin/lipoyl attachment PhaeoP54_00330 2814ede1208f185077b729f40fb93cf4 516 SUPERFAMILY SSF47005 215 255 1.28E-8 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 PhaeoP54_00330 2814ede1208f185077b729f40fb93cf4 516 SUPERFAMILY SSF52777 286 515 1.29E-90 T 14-10-2018 PhaeoP54_00330 2814ede1208f185077b729f40fb93cf4 516 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 286 514 1.9E-80 T 14-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 PhaeoP54_00330 2814ede1208f185077b729f40fb93cf4 516 SUPERFAMILY SSF51230 106 194 3.01E-25 T 14-10-2018 IPR011053 Single hybrid motif PhaeoP54_00330 2814ede1208f185077b729f40fb93cf4 516 Gene3D G3DSA:3.30.559.10 284 516 3.9E-95 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 PhaeoP54_00330 2814ede1208f185077b729f40fb93cf4 516 TIGRFAM TIGR01347 sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 108 515 3.0E-169 T 14-10-2018 IPR006255 Dihydrolipoamide succinyltransferase GO:0004149|GO:0006099|GO:0045252 KEGG: 00020+2.3.1.61|KEGG: 00310+2.3.1.61|MetaCyc: PWY-5084|Reactome: R-HSA-389661|Reactome: R-HSA-71064|Reactome: R-HSA-71403 PhaeoP54_00330 2814ede1208f185077b729f40fb93cf4 516 Gene3D G3DSA:2.40.50.100 1 101 4.9E-28 T 14-10-2018 PhaeoP54_00330 2814ede1208f185077b729f40fb93cf4 516 Gene3D G3DSA:2.40.50.100 102 201 6.8E-23 T 14-10-2018 PhaeoP54_00330 2814ede1208f185077b729f40fb93cf4 516 Gene3D G3DSA:4.10.320.10 214 258 1.0E-9 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 PhaeoP54_00330 2814ede1208f185077b729f40fb93cf4 516 Pfam PF02817 e3 binding domain 221 251 6.0E-8 T 14-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 PhaeoP54_00327 9816f99162fbc312f8f334ca376da0eb 104 Pfam PF07110 EthD domain 19 90 4.4E-5 T 14-10-2018 IPR009799 EthD domain PhaeoP54_00327 9816f99162fbc312f8f334ca376da0eb 104 Gene3D G3DSA:3.30.70.100 3 100 1.0E-26 T 14-10-2018 PhaeoP54_00327 9816f99162fbc312f8f334ca376da0eb 104 SUPERFAMILY SSF54909 1 101 9.65E-17 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel PhaeoP54_00327 9816f99162fbc312f8f334ca376da0eb 104 TIGRFAM TIGR02118 TIGR02118: conserved hypothetical protein 5 101 3.0E-15 T 14-10-2018 IPR009799 EthD domain PhaeoP54_02550 02444d157dcd205e8e286a66db175227 311 Gene3D G3DSA:2.40.10.350 186 256 2.6E-24 T 14-10-2018 PhaeoP54_02550 02444d157dcd205e8e286a66db175227 311 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 69 268 3.4E-28 T 14-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 PhaeoP54_02550 02444d157dcd205e8e286a66db175227 311 Gene3D G3DSA:2.40.10.340 129 264 2.6E-24 T 14-10-2018 PhaeoP54_02550 02444d157dcd205e8e286a66db175227 311 Pfam PF04085 rod shape-determining protein MreC 129 268 8.9E-29 T 14-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 PhaeoP54_01495 37790407450390549ba11763678f6a13 211 SUPERFAMILY SSF51391 9 209 6.28E-38 T 14-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 PhaeoP54_01495 37790407450390549ba11763678f6a13 211 Pfam PF02581 Thiamine monophosphate synthase 14 179 2.3E-23 T 14-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 PhaeoP54_01495 37790407450390549ba11763678f6a13 211 Gene3D G3DSA:3.20.20.70 4 210 1.2E-30 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PhaeoP54_01023 7362795df21aa7bece13d9e3cc60db54 709 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 324 336 3.8E-63 T 14-10-2018 PhaeoP54_01023 7362795df21aa7bece13d9e3cc60db54 709 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 77 102 3.8E-63 T 14-10-2018 PhaeoP54_01023 7362795df21aa7bece13d9e3cc60db54 709 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 256 282 3.8E-63 T 14-10-2018 PhaeoP54_01023 7362795df21aa7bece13d9e3cc60db54 709 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 234 255 3.8E-63 T 14-10-2018 PhaeoP54_01023 7362795df21aa7bece13d9e3cc60db54 709 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 432 451 3.8E-63 T 14-10-2018 PhaeoP54_01023 7362795df21aa7bece13d9e3cc60db54 709 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 159 180 3.8E-63 T 14-10-2018 PhaeoP54_01023 7362795df21aa7bece13d9e3cc60db54 709 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 112 132 3.8E-63 T 14-10-2018 PhaeoP54_01023 7362795df21aa7bece13d9e3cc60db54 709 Pfam PF00361 Proton-conducting membrane transporter 135 439 6.7E-95 T 14-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PhaeoP54_01023 7362795df21aa7bece13d9e3cc60db54 709 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 60 123 6.6E-22 T 14-10-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PhaeoP54_01023 7362795df21aa7bece13d9e3cc60db54 709 TIGRFAM TIGR01974 NDH_I_L: proton-translocating NADH-quinone oxidoreductase, chain L 3 498 9.6E-213 T 14-10-2018 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PhaeoP54_01023 7362795df21aa7bece13d9e3cc60db54 709 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 431 453 2.7E-6 T 14-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 PhaeoP54_01023 7362795df21aa7bece13d9e3cc60db54 709 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 34 53 2.7E-6 T 14-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 PhaeoP54_01023 7362795df21aa7bece13d9e3cc60db54 709 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 274 296 2.7E-6 T 14-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 PhaeoP54_02827 daf358a63e270ab5f181fc14497ee400 257 Gene3D G3DSA:3.20.20.190 13 256 5.0E-39 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 PhaeoP54_02827 daf358a63e270ab5f181fc14497ee400 257 SUPERFAMILY SSF51695 14 235 5.49E-47 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 PhaeoP54_02827 daf358a63e270ab5f181fc14497ee400 257 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 26 234 3.2E-19 T 14-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 PhaeoP54_01459 d76af468db6329e458858b10767a415b 393 SUPERFAMILY SSF111352 2 370 6.93E-113 T 14-10-2018 PhaeoP54_01459 d76af468db6329e458858b10767a415b 393 TIGRFAM TIGR00836 amt: ammonium transporter 5 389 3.5E-111 T 14-10-2018 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 PhaeoP54_01459 d76af468db6329e458858b10767a415b 393 ProSitePatterns PS01219 Ammonium transporters signature. 163 188 - T 14-10-2018 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 PhaeoP54_01459 d76af468db6329e458858b10767a415b 393 Gene3D G3DSA:1.10.3430.10 1 393 8.0E-124 T 14-10-2018 IPR029020 Ammonium/urea transporter PhaeoP54_01459 d76af468db6329e458858b10767a415b 393 Pfam PF00909 Ammonium Transporter Family 7 389 3.6E-100 T 14-10-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 PhaeoP54_01237 5729d282c8ffa10e650a428d57478d20 150 TIGRFAM TIGR04430 OM_asym_MlaD: outer membrane lipid asymmetry maintenance protein MlaD 3 144 6.0E-42 T 14-10-2018 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD GO:0015914 PhaeoP54_01237 5729d282c8ffa10e650a428d57478d20 150 Pfam PF02470 MlaD protein 37 114 1.2E-17 T 14-10-2018 IPR003399 Mce/MlaD PhaeoP54_01923 1132c693ded9d92c125110eeb27c5b52 156 Pfam PF11014 Protein of unknown function (DUF2852) 24 129 6.8E-39 T 14-10-2018 IPR021273 Protein of unknown function DUF2852 PhaeoP54_03340 75546277930ecd047257864abb0a0f21 325 TIGRFAM TIGR01254 sfuA: ABC transporter periplasmic binding protein, thiB subfamily 21 319 4.7E-103 T 14-10-2018 IPR005948 Thiamine/thiamin pyrophosphate-binding periplasmic protein, ABC transporter GO:0015888|GO:0030975 PhaeoP54_03340 75546277930ecd047257864abb0a0f21 325 SUPERFAMILY SSF53850 22 319 1.71E-55 T 14-10-2018 PhaeoP54_03340 75546277930ecd047257864abb0a0f21 325 Gene3D G3DSA:3.40.190.10 123 319 9.2E-99 T 14-10-2018 PhaeoP54_03340 75546277930ecd047257864abb0a0f21 325 TIGRFAM TIGR01276 thiB: thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein 11 325 1.6E-106 T 14-10-2018 IPR005967 Thiamin/thiamin pyrophosphate ABC transporter, substrate-binding protein, Proteobacteria GO:0015888|GO:0030288|GO:0030975 PhaeoP54_03340 75546277930ecd047257864abb0a0f21 325 Gene3D G3DSA:3.40.190.10 25 295 9.2E-99 T 14-10-2018 PhaeoP54_03340 75546277930ecd047257864abb0a0f21 325 Pfam PF13531 Bacterial extracellular solute-binding protein 42 270 3.1E-14 T 14-10-2018 PhaeoP54_00859 3e519a1d8a7210aa6d39ef575edeaaa5 378 Pfam PF02563 Polysaccharide biosynthesis/export protein 81 161 4.1E-17 T 14-10-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 PhaeoP54_00859 3e519a1d8a7210aa6d39ef575edeaaa5 378 Gene3D G3DSA:3.30.1950.10 86 166 1.0E-57 T 14-10-2018 PhaeoP54_00859 3e519a1d8a7210aa6d39ef575edeaaa5 378 Gene3D G3DSA:3.10.560.10 248 346 1.0E-57 T 14-10-2018 PhaeoP54_00859 3e519a1d8a7210aa6d39ef575edeaaa5 378 Gene3D G3DSA:3.10.560.10 172 247 1.0E-57 T 14-10-2018 PhaeoP54_01936 8e21fab8cbd59df5065068d0ac19d3f7 256 Pfam PF09955 Predicted integral membrane protein (DUF2189) 65 189 6.2E-35 T 14-10-2018 IPR018692 Predicted integral membrane protein DUF2189 PhaeoP54_03205 e111c01b24cff74776a6e9c82725e85b 216 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 199 1.8E-21 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 PhaeoP54_03205 e111c01b24cff74776a6e9c82725e85b 216 Gene3D G3DSA:3.40.50.1240 2 198 6.9E-30 T 14-10-2018 IPR029033 Histidine phosphatase superfamily PhaeoP54_03205 e111c01b24cff74776a6e9c82725e85b 216 SMART SM00855 3 159 3.9E-10 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 PhaeoP54_03205 e111c01b24cff74776a6e9c82725e85b 216 SUPERFAMILY SSF53254 1 207 1.7E-33 T 14-10-2018 IPR029033 Histidine phosphatase superfamily PhaeoP54_00277 550103a4118d8479aec9d3778ed93937 331 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 16 158 9.6E-40 T 14-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 PhaeoP54_00277 550103a4118d8479aec9d3778ed93937 331 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 167 312 3.1E-21 T 14-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 PhaeoP54_00277 550103a4118d8479aec9d3778ed93937 331 SUPERFAMILY SSF53671 12 316 2.23E-92 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 PhaeoP54_00277 550103a4118d8479aec9d3778ed93937 331 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 15 316 38.516 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 PhaeoP54_00277 550103a4118d8479aec9d3778ed93937 331 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 16 313 6.9E-89 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 PhaeoP54_00277 550103a4118d8479aec9d3778ed93937 331 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 62 69 - T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 PhaeoP54_00277 550103a4118d8479aec9d3778ed93937 331 Gene3D G3DSA:3.40.50.1370 146 293 6.2E-89 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 PhaeoP54_00277 550103a4118d8479aec9d3778ed93937 331 Gene3D G3DSA:3.40.50.1370 21 308 6.2E-89 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 PhaeoP54_00277 550103a4118d8479aec9d3778ed93937 331 PRINTS PR00101 Aspartate carbamoyltransferase signature 145 162 1.8E-28 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 PhaeoP54_00277 550103a4118d8479aec9d3778ed93937 331 PRINTS PR00101 Aspartate carbamoyltransferase signature 295 309 1.8E-28 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 PhaeoP54_00277 550103a4118d8479aec9d3778ed93937 331 PRINTS PR00101 Aspartate carbamoyltransferase signature 52 74 1.8E-28 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 PhaeoP54_00277 550103a4118d8479aec9d3778ed93937 331 PRINTS PR00101 Aspartate carbamoyltransferase signature 229 238 1.8E-28 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 PhaeoP54_00277 550103a4118d8479aec9d3778ed93937 331 PRINTS PR00101 Aspartate carbamoyltransferase signature 270 275 1.8E-28 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 PhaeoP54_00277 550103a4118d8479aec9d3778ed93937 331 PRINTS PR00101 Aspartate carbamoyltransferase signature 90 99 1.8E-28 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 PhaeoP54_00277 550103a4118d8479aec9d3778ed93937 331 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 146 157 2.1E-13 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 PhaeoP54_00277 550103a4118d8479aec9d3778ed93937 331 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 266 275 2.1E-13 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 PhaeoP54_00277 550103a4118d8479aec9d3778ed93937 331 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 62 81 2.1E-13 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 PhaeoP54_00067 8dc02e203faeb38fd39145e89f982955 182 TIGRFAM TIGR02150 IPP_isom_1: isopentenyl-diphosphate delta-isomerase 17 161 1.6E-33 T 14-10-2018 IPR011876 Isopentenyl-diphosphate delta-isomerase, type 1 GO:0004452|GO:0008299 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922|Reactome: R-HSA-191273 PhaeoP54_00067 8dc02e203faeb38fd39145e89f982955 182 PIRSF PIRSF018427 1 174 4.5E-45 T 14-10-2018 IPR011876 Isopentenyl-diphosphate delta-isomerase, type 1 GO:0004452|GO:0008299 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922|Reactome: R-HSA-191273 PhaeoP54_00067 8dc02e203faeb38fd39145e89f982955 182 SUPERFAMILY SSF55811 10 166 4.33E-42 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 PhaeoP54_00067 8dc02e203faeb38fd39145e89f982955 182 Hamap MF_00202 Isopentenyl-diphosphate Delta-isomerase [idi]. 1 173 31.166 T 14-10-2018 IPR011876 Isopentenyl-diphosphate delta-isomerase, type 1 GO:0004452|GO:0008299 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922|Reactome: R-HSA-191273 PhaeoP54_00067 8dc02e203faeb38fd39145e89f982955 182 Pfam PF00293 NUDIX domain 27 158 1.9E-19 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 PhaeoP54_00067 8dc02e203faeb38fd39145e89f982955 182 Gene3D G3DSA:3.90.79.10 10 171 2.4E-42 T 14-10-2018 PhaeoP54_03687 9b6bdeb65deecade06684e729437c11e 296 Gene3D G3DSA:3.40.190.290 91 293 1.3E-24 T 14-10-2018 PhaeoP54_03687 9b6bdeb65deecade06684e729437c11e 296 SUPERFAMILY SSF53850 88 289 1.52E-29 T 14-10-2018 PhaeoP54_03687 9b6bdeb65deecade06684e729437c11e 296 SUPERFAMILY SSF46785 1 110 5.2E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_03687 9b6bdeb65deecade06684e729437c11e 296 Gene3D G3DSA:1.10.10.10 1 89 5.9E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_03687 9b6bdeb65deecade06684e729437c11e 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.0E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PhaeoP54_03687 9b6bdeb65deecade06684e729437c11e 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.0E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PhaeoP54_03687 9b6bdeb65deecade06684e729437c11e 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.0E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PhaeoP54_03687 9b6bdeb65deecade06684e729437c11e 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 5.4E-21 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PhaeoP54_03687 9b6bdeb65deecade06684e729437c11e 296 Pfam PF03466 LysR substrate binding domain 87 288 1.7E-31 T 14-10-2018 IPR005119 LysR, substrate-binding PhaeoP54_00820 ee05de64fef69fcadc76796753918d58 243 Pfam PF04542 Sigma-70 region 2 80 145 3.1E-21 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 PhaeoP54_00820 ee05de64fef69fcadc76796753918d58 243 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 74 228 6.8E-29 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 PhaeoP54_00820 ee05de64fef69fcadc76796753918d58 243 Gene3D G3DSA:1.10.1740.10 60 142 1.6E-24 T 14-10-2018 PhaeoP54_00820 ee05de64fef69fcadc76796753918d58 243 Pfam PF08281 Sigma-70, region 4 175 227 1.6E-14 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PhaeoP54_00820 ee05de64fef69fcadc76796753918d58 243 Gene3D G3DSA:1.10.10.10 155 234 2.1E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_00820 ee05de64fef69fcadc76796753918d58 243 SUPERFAMILY SSF88946 58 153 1.19E-25 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 PhaeoP54_00820 ee05de64fef69fcadc76796753918d58 243 SUPERFAMILY SSF88659 150 233 1.05E-14 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like PhaeoP54_00752 a69090fb8f8406fc07a47c1ffe4cb7af 335 Gene3D G3DSA:1.10.3720.10 90 334 1.7E-56 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_00752 a69090fb8f8406fc07a47c1ffe4cb7af 335 SUPERFAMILY SSF161098 94 322 2.35E-48 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_00752 a69090fb8f8406fc07a47c1ffe4cb7af 335 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 126 324 1.1E-12 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PhaeoP54_02897 8d471052d2069a5ee1ba9b18bb61d955 529 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 48 267 2.6E-63 T 14-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 PhaeoP54_02897 8d471052d2069a5ee1ba9b18bb61d955 529 Gene3D G3DSA:3.40.710.10 32 298 1.3E-79 T 14-10-2018 PhaeoP54_02897 8d471052d2069a5ee1ba9b18bb61d955 529 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 126 143 1.1E-11 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 PhaeoP54_02897 8d471052d2069a5ee1ba9b18bb61d955 529 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 153 166 1.1E-11 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 PhaeoP54_02897 8d471052d2069a5ee1ba9b18bb61d955 529 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 73 84 1.1E-11 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 PhaeoP54_02897 8d471052d2069a5ee1ba9b18bb61d955 529 SUPERFAMILY SSF56601 27 285 2.34E-73 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like PhaeoP54_02380 57f6bcfc9ca815df76918d7650a664e2 306 Pfam PF01368 DHH family 3 146 2.2E-18 T 14-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 PhaeoP54_02380 57f6bcfc9ca815df76918d7650a664e2 306 SUPERFAMILY SSF64182 2 304 4.06E-66 T 14-10-2018 IPR038763 DHH phosphoesterase superfamily PhaeoP54_02380 57f6bcfc9ca815df76918d7650a664e2 306 Pfam PF02833 DHHA2 domain 183 304 3.8E-18 T 14-10-2018 IPR004097 DHHA2 domain GO:0005737|GO:0016462 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 PhaeoP54_02380 57f6bcfc9ca815df76918d7650a664e2 306 SMART SM01131 181 306 2.9E-40 T 14-10-2018 IPR004097 DHHA2 domain GO:0005737|GO:0016462 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 PhaeoP54_02380 57f6bcfc9ca815df76918d7650a664e2 306 Gene3D G3DSA:3.10.310.20 191 306 6.0E-30 T 14-10-2018 IPR038222 DHHA2 domain superfamily KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 PhaeoP54_02380 57f6bcfc9ca815df76918d7650a664e2 306 Gene3D G3DSA:3.90.1640.10 1 189 7.0E-59 T 14-10-2018 PhaeoP54_00715 4306b891c734792c59774d0507f512db 189 SMART SM00028 69 102 260.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 PhaeoP54_00715 4306b891c734792c59774d0507f512db 189 SMART SM00028 137 170 0.067 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 PhaeoP54_00715 4306b891c734792c59774d0507f512db 189 SMART SM00028 103 136 0.015 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 PhaeoP54_00715 4306b891c734792c59774d0507f512db 189 Pfam PF13432 Tetratricopeptide repeat 73 126 9.0E-7 T 14-10-2018 PhaeoP54_00715 4306b891c734792c59774d0507f512db 189 SUPERFAMILY SSF48452 69 178 7.17E-20 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 PhaeoP54_00715 4306b891c734792c59774d0507f512db 189 Gene3D G3DSA:1.25.40.10 25 188 3.3E-19 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 PhaeoP54_03551 c50f416584d19428f296dd15c841624b 246 SUPERFAMILY SSF56300 5 224 5.77E-48 T 14-10-2018 PhaeoP54_03551 c50f416584d19428f296dd15c841624b 246 Pfam PF00149 Calcineurin-like phosphoesterase 8 207 5.4E-15 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 PhaeoP54_03551 c50f416584d19428f296dd15c841624b 246 Gene3D G3DSA:3.60.21.10 2 243 2.8E-56 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like PhaeoP54_03551 c50f416584d19428f296dd15c841624b 246 PRINTS PR00114 Serine/threonine phosphatase family signature 39 66 4.5E-5 T 14-10-2018 IPR006186 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase GO:0016787 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 PhaeoP54_03551 c50f416584d19428f296dd15c841624b 246 PRINTS PR00114 Serine/threonine phosphatase family signature 8 35 4.5E-5 T 14-10-2018 IPR006186 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase GO:0016787 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 PhaeoP54_03011 7364b1afa856d95d9a7b9b185fd1f4bc 470 Pfam PF00155 Aminotransferase class I and II 102 452 8.3E-20 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 PhaeoP54_03011 7364b1afa856d95d9a7b9b185fd1f4bc 470 Gene3D G3DSA:3.40.640.10 136 351 1.3E-61 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PhaeoP54_03011 7364b1afa856d95d9a7b9b185fd1f4bc 470 Gene3D G3DSA:3.90.1150.10 102 456 1.3E-61 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 PhaeoP54_03011 7364b1afa856d95d9a7b9b185fd1f4bc 470 SUPERFAMILY SSF53383 97 461 2.61E-66 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PhaeoP54_03011 7364b1afa856d95d9a7b9b185fd1f4bc 470 SUPERFAMILY SSF46785 11 82 2.22E-15 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_03011 7364b1afa856d95d9a7b9b185fd1f4bc 470 Gene3D G3DSA:1.10.10.10 7 79 1.8E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_03011 7364b1afa856d95d9a7b9b185fd1f4bc 470 Pfam PF00392 Bacterial regulatory proteins, gntR family 16 78 5.8E-13 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PhaeoP54_03011 7364b1afa856d95d9a7b9b185fd1f4bc 470 SMART SM00345 19 78 1.1E-11 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PhaeoP54_00259 a2da0a8d0927fb333942f57cf6d1c2e8 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 2 19 8.9E-19 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_00259 a2da0a8d0927fb333942f57cf6d1c2e8 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 8.9E-19 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_00259 a2da0a8d0927fb333942f57cf6d1c2e8 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 160 179 8.9E-19 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_00259 a2da0a8d0927fb333942f57cf6d1c2e8 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 8.9E-19 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_00259 a2da0a8d0927fb333942f57cf6d1c2e8 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 211 231 8.9E-19 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_00259 a2da0a8d0927fb333942f57cf6d1c2e8 258 SUPERFAMILY SSF51735 2 247 3.01E-50 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PhaeoP54_00259 a2da0a8d0927fb333942f57cf6d1c2e8 258 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 7 246 3.6E-32 T 14-10-2018 PhaeoP54_00259 a2da0a8d0927fb333942f57cf6d1c2e8 258 Gene3D G3DSA:3.40.50.720 1 258 5.3E-55 T 14-10-2018 PhaeoP54_03066 3bee90323a8b8245df95d4dcffdbdb9d 805 Gene3D G3DSA:1.10.268.10 404 511 4.8E-181 T 14-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 PhaeoP54_03066 3bee90323a8b8245df95d4dcffdbdb9d 805 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 65 517 1.1E-139 T 14-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 PhaeoP54_03066 3bee90323a8b8245df95d4dcffdbdb9d 805 Gene3D G3DSA:2.120.10.90 562 742 2.7E-16 T 14-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal PhaeoP54_03066 3bee90323a8b8245df95d4dcffdbdb9d 805 SUPERFAMILY SSF101904 559 803 2.09E-49 T 14-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal PhaeoP54_03066 3bee90323a8b8245df95d4dcffdbdb9d 805 Hamap MF_00936 DNA topoisomerase 4 subunit A [parC]. 37 805 32.772 T 14-10-2018 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 PhaeoP54_03066 3bee90323a8b8245df95d4dcffdbdb9d 805 TIGRFAM TIGR01062 parC_Gneg: DNA topoisomerase IV, A subunit 45 804 3.5E-247 T 14-10-2018 PhaeoP54_03066 3bee90323a8b8245df95d4dcffdbdb9d 805 SUPERFAMILY SSF56719 64 535 3.53E-155 T 14-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 PhaeoP54_03066 3bee90323a8b8245df95d4dcffdbdb9d 805 SMART SM00434 44 518 1.3E-219 T 14-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 PhaeoP54_03066 3bee90323a8b8245df95d4dcffdbdb9d 805 Gene3D G3DSA:3.30.1360.40 270 366 4.8E-181 T 14-10-2018 PhaeoP54_03066 3bee90323a8b8245df95d4dcffdbdb9d 805 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 606 653 0.078 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 PhaeoP54_03066 3bee90323a8b8245df95d4dcffdbdb9d 805 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 659 694 5.2E-4 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 PhaeoP54_03066 3bee90323a8b8245df95d4dcffdbdb9d 805 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 704 737 0.0012 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 PhaeoP54_03066 3bee90323a8b8245df95d4dcffdbdb9d 805 Gene3D G3DSA:3.90.199.10 65 535 4.8E-181 T 14-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 PhaeoP54_00510 dac937411f109e60685f61cfc2a54d54 327 SUPERFAMILY SSF53448 10 222 8.04E-39 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PhaeoP54_00510 dac937411f109e60685f61cfc2a54d54 327 Pfam PF00535 Glycosyl transferase family 2 19 140 7.3E-19 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 PhaeoP54_00510 dac937411f109e60685f61cfc2a54d54 327 Pfam PF13632 Glycosyl transferase family group 2 153 280 2.5E-6 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 PhaeoP54_00510 dac937411f109e60685f61cfc2a54d54 327 Gene3D G3DSA:3.90.550.10 11 221 4.3E-30 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PhaeoP54_01337 8e43c1424742c33ba3393a7e70289a3f 128 Gene3D G3DSA:3.10.450.50 1 102 1.8E-12 T 14-10-2018 PhaeoP54_01337 8e43c1424742c33ba3393a7e70289a3f 128 SUPERFAMILY SSF54427 2 110 1.16E-14 T 14-10-2018 IPR032710 NTF2-like domain superfamily PhaeoP54_01337 8e43c1424742c33ba3393a7e70289a3f 128 Pfam PF12680 SnoaL-like domain 3 84 2.3E-6 T 14-10-2018 IPR037401 SnoaL-like domain PhaeoP54_03752 cc70b5c14ef0b95ef5cf1d879c7938c0 483 Gene3D G3DSA:3.40.605.10 15 475 3.1E-154 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 PhaeoP54_03752 cc70b5c14ef0b95ef5cf1d879c7938c0 483 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 282 293 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 PhaeoP54_03752 cc70b5c14ef0b95ef5cf1d879c7938c0 483 SUPERFAMILY SSF53720 11 480 2.62E-142 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 PhaeoP54_03752 cc70b5c14ef0b95ef5cf1d879c7938c0 483 Gene3D G3DSA:3.40.309.10 259 447 3.1E-154 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 PhaeoP54_03752 cc70b5c14ef0b95ef5cf1d879c7938c0 483 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 254 261 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 PhaeoP54_03752 cc70b5c14ef0b95ef5cf1d879c7938c0 483 Pfam PF00171 Aldehyde dehydrogenase family 18 477 1.1E-145 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 PhaeoP54_03549 02bb43494932499588018ccc268b1462 256 Gene3D G3DSA:1.10.3810.10 71 247 5.6E-48 T 14-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 PhaeoP54_03549 02bb43494932499588018ccc268b1462 256 Pfam PF00912 Transglycosylase 81 239 4.1E-47 T 14-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 PhaeoP54_03549 02bb43494932499588018ccc268b1462 256 SUPERFAMILY SSF53955 77 242 5.62E-54 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily PhaeoP54_03549 02bb43494932499588018ccc268b1462 256 Hamap MF_00766 Biosynthetic peptidoglycan transglycosylase [mtgA]. 38 248 39.396 T 14-10-2018 IPR011812 Biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 PhaeoP54_03549 02bb43494932499588018ccc268b1462 256 TIGRFAM TIGR02070 mono_pep_trsgly: monofunctional biosynthetic peptidoglycan transglycosylase 41 243 2.4E-65 T 14-10-2018 IPR011812 Biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 PhaeoP54_02034 fd5acd6cd6773d8c943acc31095ba236 131 Pfam PF01381 Helix-turn-helix 21 74 1.2E-13 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PhaeoP54_02034 fd5acd6cd6773d8c943acc31095ba236 131 SUPERFAMILY SSF47413 15 79 3.38E-16 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 PhaeoP54_02034 fd5acd6cd6773d8c943acc31095ba236 131 Gene3D G3DSA:1.10.260.40 12 78 5.5E-18 T 14-10-2018 PhaeoP54_02034 fd5acd6cd6773d8c943acc31095ba236 131 SMART SM00530 19 74 2.0E-13 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PhaeoP54_02329 1b13da401b959afd7e60f68274f57c27 192 Pfam PF00881 Nitroreductase family 22 168 7.6E-17 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 PhaeoP54_02329 1b13da401b959afd7e60f68274f57c27 192 SUPERFAMILY SSF55469 5 191 2.22E-31 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 PhaeoP54_02329 1b13da401b959afd7e60f68274f57c27 192 PIRSF PIRSF000232 3 192 1.8E-46 T 14-10-2018 IPR026021 Putative NAD(P)H nitroreductase YdjA-like PhaeoP54_02329 1b13da401b959afd7e60f68274f57c27 192 Gene3D G3DSA:3.40.109.10 9 170 2.0E-27 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 PhaeoP54_03147 c0fcefefa6cbd14ebb16259a930ee0a4 271 Pfam PF09140 ATPase MipZ 5 265 1.7E-115 T 14-10-2018 IPR015223 ATPase MipZ PhaeoP54_03147 c0fcefefa6cbd14ebb16259a930ee0a4 271 SUPERFAMILY SSF52540 5 237 5.55E-29 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_03147 c0fcefefa6cbd14ebb16259a930ee0a4 271 Gene3D G3DSA:3.40.50.300 1 270 4.6E-62 T 14-10-2018 PhaeoP54_03112 1882f511064f64649b7386d8139cbe75 324 Pfam PF13410 Glutathione S-transferase, C-terminal domain 204 275 7.0E-13 T 14-10-2018 PhaeoP54_03112 1882f511064f64649b7386d8139cbe75 324 SUPERFAMILY SSF52833 41 162 4.03E-15 T 14-10-2018 IPR036249 Thioredoxin-like superfamily PhaeoP54_03112 1882f511064f64649b7386d8139cbe75 324 SUPERFAMILY SSF47616 182 323 6.26E-36 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily PhaeoP54_03112 1882f511064f64649b7386d8139cbe75 324 Gene3D G3DSA:1.20.1050.10 180 324 7.4E-66 T 14-10-2018 PhaeoP54_03112 1882f511064f64649b7386d8139cbe75 324 Pfam PF13409 Glutathione S-transferase, N-terminal domain 62 158 1.7E-22 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 PhaeoP54_03112 1882f511064f64649b7386d8139cbe75 324 Gene3D G3DSA:3.40.30.130 1 179 2.9E-75 T 14-10-2018 PhaeoP54_03112 1882f511064f64649b7386d8139cbe75 324 PIRSF PIRSF015753 5 324 2.1E-131 T 14-10-2018 IPR016639 Glutathione S-transferase Omega/GSH GO:0004364 PhaeoP54_03337 0bfb7e79a07506dd8d2a42fd91ec2a42 145 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 1 142 19.856 T 14-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 PhaeoP54_03337 0bfb7e79a07506dd8d2a42fd91ec2a42 145 SUPERFAMILY SSF52121 2 140 1.57E-40 T 14-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 PhaeoP54_03337 0bfb7e79a07506dd8d2a42fd91ec2a42 145 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 4 138 4.6E-32 T 14-10-2018 IPR002180 Lumazine/riboflavin synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 PhaeoP54_03337 0bfb7e79a07506dd8d2a42fd91ec2a42 145 Gene3D G3DSA:3.40.50.960 1 143 4.0E-45 T 14-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 PhaeoP54_03050 07dbce462afa6b625e95d55b67197a54 180 SUPERFAMILY SSF54909 5 88 4.02E-14 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel PhaeoP54_03050 07dbce462afa6b625e95d55b67197a54 180 Pfam PF03992 Antibiotic biosynthesis monooxygenase 12 77 2.7E-8 T 14-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain PhaeoP54_03050 07dbce462afa6b625e95d55b67197a54 180 Gene3D G3DSA:3.30.70.100 2 98 1.3E-11 T 14-10-2018 PhaeoP54_01526 3dfd470d4a03758754d57feb5b2d3529 104 Hamap MF_00338 UPF0145 protein YbjQ [ybjQ]. 1 103 25.328 T 14-10-2018 IPR002765 Uncharacterised protein family UPF0145 PhaeoP54_01526 3dfd470d4a03758754d57feb5b2d3529 104 SUPERFAMILY SSF117782 1 103 3.66E-38 T 14-10-2018 IPR035439 UPF0145 domain superfamily PhaeoP54_01526 3dfd470d4a03758754d57feb5b2d3529 104 Gene3D G3DSA:3.30.110.70 1 104 2.3E-43 T 14-10-2018 PhaeoP54_01526 3dfd470d4a03758754d57feb5b2d3529 104 Pfam PF01906 Putative heavy-metal-binding 1 103 8.4E-41 T 14-10-2018 IPR002765 Uncharacterised protein family UPF0145 PhaeoP54_02270 d97bc9c896658c4dbbe02cc45f19528c 235 SUPERFAMILY SSF50090 1 235 2.24E-73 T 14-10-2018 IPR008990 Electron transport accessory-like domain superfamily PhaeoP54_02270 d97bc9c896658c4dbbe02cc45f19528c 235 TIGRFAM TIGR03888 nitrile_beta: nitrile hydratase, beta subunit 1 235 7.4E-75 T 14-10-2018 IPR003168 Nitrile hydratase, beta subunit GO:0006807|GO:0018822|GO:0046914 KEGG: 00364+4.2.1.84|KEGG: 00380+4.2.1.84|KEGG: 00627+4.2.1.84|KEGG: 00643+4.2.1.84|MetaCyc: PWY-5025|MetaCyc: PWY-581|MetaCyc: PWY-7308 PhaeoP54_02270 d97bc9c896658c4dbbe02cc45f19528c 235 Pfam PF02211 Nitrile hydratase beta subunit 1 234 7.9E-78 T 14-10-2018 IPR024690 Nitrile hydratase beta subunit domain GO:0018822 KEGG: 00364+4.2.1.84|KEGG: 00380+4.2.1.84|KEGG: 00627+4.2.1.84|KEGG: 00643+4.2.1.84|MetaCyc: PWY-5025|MetaCyc: PWY-581|MetaCyc: PWY-7308 PhaeoP54_02270 d97bc9c896658c4dbbe02cc45f19528c 235 Gene3D G3DSA:1.10.472.20 1 130 1.5E-36 T 14-10-2018 PhaeoP54_02270 d97bc9c896658c4dbbe02cc45f19528c 235 PIRSF PIRSF001427 1 235 7.4E-52 T 14-10-2018 IPR003168 Nitrile hydratase, beta subunit GO:0006807|GO:0018822|GO:0046914 KEGG: 00364+4.2.1.84|KEGG: 00380+4.2.1.84|KEGG: 00627+4.2.1.84|KEGG: 00643+4.2.1.84|MetaCyc: PWY-5025|MetaCyc: PWY-581|MetaCyc: PWY-7308 PhaeoP54_02270 d97bc9c896658c4dbbe02cc45f19528c 235 Gene3D G3DSA:2.30.30.50 134 235 1.8E-31 T 14-10-2018 PhaeoP54_02130 f219e883d268922753b37ab8330709fc 187 Pfam PF14627 Domain of unknown function (DUF4453) 81 187 1.0E-49 T 14-10-2018 IPR027920 Domain of unknown function DUF4453 PhaeoP54_02130 f219e883d268922753b37ab8330709fc 187 SMART SM01324 6 78 1.6E-16 T 14-10-2018 IPR025582 YARHG domain PhaeoP54_02130 f219e883d268922753b37ab8330709fc 187 Pfam PF13308 YARHG domain 18 73 1.8E-11 T 14-10-2018 IPR025582 YARHG domain PhaeoP54_00409 a9a9958e50f73790af287209b7231dd6 344 Pfam PF13692 Glycosyl transferases group 1 166 304 7.3E-21 T 14-10-2018 PhaeoP54_00409 a9a9958e50f73790af287209b7231dd6 344 SUPERFAMILY SSF53756 52 333 1.03E-38 T 14-10-2018 PhaeoP54_00409 a9a9958e50f73790af287209b7231dd6 344 Gene3D G3DSA:3.40.50.2000 57 331 6.1E-31 T 14-10-2018 PhaeoP54_00409 a9a9958e50f73790af287209b7231dd6 344 Gene3D G3DSA:3.40.50.2000 145 323 6.1E-31 T 14-10-2018 PhaeoP54_02162 0a2d3360da4c900c955489e3b26ccba1 307 Gene3D G3DSA:3.90.226.10 65 277 1.5E-28 T 14-10-2018 PhaeoP54_02162 0a2d3360da4c900c955489e3b26ccba1 307 Gene3D G3DSA:3.40.1750.20 170 233 1.5E-28 T 14-10-2018 PhaeoP54_02162 0a2d3360da4c900c955489e3b26ccba1 307 SUPERFAMILY SSF52096 58 270 2.18E-27 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily PhaeoP54_02162 0a2d3360da4c900c955489e3b26ccba1 307 Pfam PF01343 Peptidase family S49 131 279 8.8E-17 T 14-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 PhaeoP54_01555 4ad5ea8c947c2f5bd4b206a7c4a1d981 288 Pfam PF13622 Thioesterase-like superfamily 33 282 6.8E-60 T 14-10-2018 PhaeoP54_01555 4ad5ea8c947c2f5bd4b206a7c4a1d981 288 SUPERFAMILY SSF54637 117 285 3.78E-51 T 14-10-2018 IPR029069 HotDog domain superfamily PhaeoP54_01555 4ad5ea8c947c2f5bd4b206a7c4a1d981 288 Gene3D G3DSA:3.10.129.90 3 285 1.7E-95 T 14-10-2018 PhaeoP54_01555 4ad5ea8c947c2f5bd4b206a7c4a1d981 288 SUPERFAMILY SSF54637 8 114 4.73E-35 T 14-10-2018 IPR029069 HotDog domain superfamily PhaeoP54_02637 fbdb32b92999bd60f40af6c7a90ba6ff 341 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 133 275 4.9E-19 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PhaeoP54_02637 fbdb32b92999bd60f40af6c7a90ba6ff 341 SUPERFAMILY SSF161098 109 325 9.81E-39 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_02637 fbdb32b92999bd60f40af6c7a90ba6ff 341 Gene3D G3DSA:1.10.3720.10 100 335 1.8E-39 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_00864 2a9722304da91656f1b09e227fe7e73c 163 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 20 157 1.5E-34 T 14-10-2018 IPR011605 NusB antitermination factor GO:0006353 PhaeoP54_00864 2a9722304da91656f1b09e227fe7e73c 163 Gene3D G3DSA:1.10.940.10 17 162 3.5E-31 T 14-10-2018 IPR035926 NusB-like superfamily PhaeoP54_00864 2a9722304da91656f1b09e227fe7e73c 163 Hamap MF_00073 Transcription antitermination protein NusB [nusB]. 18 159 17.284 T 14-10-2018 IPR011605 NusB antitermination factor GO:0006353 PhaeoP54_00864 2a9722304da91656f1b09e227fe7e73c 163 Pfam PF01029 NusB family 22 156 3.1E-27 T 14-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 PhaeoP54_00864 2a9722304da91656f1b09e227fe7e73c 163 SUPERFAMILY SSF48013 19 153 3.14E-29 T 14-10-2018 IPR035926 NusB-like superfamily PhaeoP54_01263 f9944067bf474d9330be29268e0624d0 228 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 38 51 8.6E-10 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PhaeoP54_01263 f9944067bf474d9330be29268e0624d0 228 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 59 82 8.6E-10 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PhaeoP54_01263 f9944067bf474d9330be29268e0624d0 228 Pfam PF08362 YcdC-like protein, C-terminal region 85 222 4.9E-48 T 14-10-2018 IPR013573 Transcription regulator YcdC, C-terminal GO:0045892 PhaeoP54_01263 f9944067bf474d9330be29268e0624d0 228 SUPERFAMILY SSF46689 27 109 2.14E-20 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PhaeoP54_01263 f9944067bf474d9330be29268e0624d0 228 SUPERFAMILY SSF48498 102 222 9.45E-40 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily PhaeoP54_01263 f9944067bf474d9330be29268e0624d0 228 Pfam PF00440 Bacterial regulatory proteins, tetR family 38 84 4.9E-16 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PhaeoP54_01263 f9944067bf474d9330be29268e0624d0 228 Gene3D G3DSA:1.10.357.10 85 222 6.4E-39 T 14-10-2018 PhaeoP54_01263 f9944067bf474d9330be29268e0624d0 228 Gene3D G3DSA:1.10.10.60 18 83 5.7E-23 T 14-10-2018 PhaeoP54_02806 1d2960289f3f820c9f51e6b13cdd8698 160 ProSitePatterns PS00893 Nudix box signature. 44 65 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 PhaeoP54_02806 1d2960289f3f820c9f51e6b13cdd8698 160 SUPERFAMILY SSF55811 8 160 1.62E-33 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 PhaeoP54_02806 1d2960289f3f820c9f51e6b13cdd8698 160 Pfam PF00293 NUDIX domain 11 151 4.2E-30 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 PhaeoP54_02806 1d2960289f3f820c9f51e6b13cdd8698 160 Gene3D G3DSA:3.90.79.10 6 160 2.7E-44 T 14-10-2018 PhaeoP54_02806 1d2960289f3f820c9f51e6b13cdd8698 160 PRINTS PR00502 NUDIX hydrolase family signature 53 68 1.4E-6 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 PhaeoP54_02806 1d2960289f3f820c9f51e6b13cdd8698 160 PRINTS PR00502 NUDIX hydrolase family signature 39 53 1.4E-6 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 PhaeoP54_02806 1d2960289f3f820c9f51e6b13cdd8698 160 Hamap MF_00298 RNA pyrophosphohydrolase [rppH]. 5 160 33.922 T 14-10-2018 IPR022927 RNA pyrophosphohydrolase RppH PhaeoP54_01193 ed0a4b8caabc5ed119cfce7d33905664 443 TIGRFAM TIGR00797 matE: MATE efflux family protein 23 416 4.0E-68 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 PhaeoP54_01193 ed0a4b8caabc5ed119cfce7d33905664 443 Pfam PF01554 MatE 246 399 4.9E-12 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 PhaeoP54_01193 ed0a4b8caabc5ed119cfce7d33905664 443 Pfam PF01554 MatE 23 183 1.5E-14 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 PhaeoP54_00535 1c8032d77f9ce08bedb9f57f0a168e9a 223 Pfam PF13426 PAS domain 24 107 2.6E-6 T 14-10-2018 IPR000014 PAS domain PhaeoP54_00535 1c8032d77f9ce08bedb9f57f0a168e9a 223 SUPERFAMILY SSF55785 26 100 1.29E-9 T 14-10-2018 IPR035965 PAS domain superfamily PhaeoP54_00535 1c8032d77f9ce08bedb9f57f0a168e9a 223 Gene3D G3DSA:3.30.450.20 15 179 3.0E-16 T 14-10-2018 PhaeoP54_03858 46666a53bafe3d5c2f6fb026cf3929d7 459 Gene3D G3DSA:1.10.1200.160 406 437 4.6E-51 T 14-10-2018 PhaeoP54_03858 46666a53bafe3d5c2f6fb026cf3929d7 459 Pfam PF03743 Bacterial conjugation TrbI-like protein 282 457 6.0E-52 T 14-10-2018 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI PhaeoP54_03858 46666a53bafe3d5c2f6fb026cf3929d7 459 Gene3D G3DSA:2.40.128.260 285 456 4.6E-51 T 14-10-2018 PhaeoP54_00946 17c74ee4fa3553a39dcc5abeb9cb16ab 600 Gene3D G3DSA:3.40.350.10 12 154 5.2E-38 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal PhaeoP54_00946 17c74ee4fa3553a39dcc5abeb9cb16ab 600 SUPERFAMILY SSF55920 312 566 7.46E-51 T 14-10-2018 IPR036005 Creatinase/aminopeptidase-like PhaeoP54_00946 17c74ee4fa3553a39dcc5abeb9cb16ab 600 Pfam PF16188 C-terminal region of peptidase_M24 541 600 3.4E-19 T 14-10-2018 IPR032416 Peptidase M24, C-terminal domain PhaeoP54_00946 17c74ee4fa3553a39dcc5abeb9cb16ab 600 Pfam PF01321 Creatinase/Prolidase N-terminal domain 17 153 5.5E-19 T 14-10-2018 IPR000587 Creatinase, N-terminal GO:0016787 PhaeoP54_00946 17c74ee4fa3553a39dcc5abeb9cb16ab 600 Gene3D G3DSA:3.40.350.10 155 296 4.8E-28 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal PhaeoP54_00946 17c74ee4fa3553a39dcc5abeb9cb16ab 600 Gene3D G3DSA:3.90.230.10 307 600 8.0E-87 T 14-10-2018 PhaeoP54_00946 17c74ee4fa3553a39dcc5abeb9cb16ab 600 Pfam PF16189 Creatinase/Prolidase N-terminal domain 156 313 1.4E-33 T 14-10-2018 PhaeoP54_00946 17c74ee4fa3553a39dcc5abeb9cb16ab 600 SUPERFAMILY SSF53092 17 154 3.49E-13 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal PhaeoP54_00946 17c74ee4fa3553a39dcc5abeb9cb16ab 600 Pfam PF00557 Metallopeptidase family M24 320 527 7.8E-43 T 14-10-2018 IPR000994 Peptidase M24 PhaeoP54_02739 ba6f2eb8f22fb6d2cf1c4801ad85dc5d 232 Gene3D G3DSA:3.40.50.880 1 225 2.9E-57 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like PhaeoP54_02739 ba6f2eb8f22fb6d2cf1c4801ad85dc5d 232 SUPERFAMILY SSF52317 3 221 3.67E-39 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like PhaeoP54_02739 ba6f2eb8f22fb6d2cf1c4801ad85dc5d 232 Pfam PF07722 Peptidase C26 42 198 1.5E-45 T 14-10-2018 IPR011697 Peptidase C26 GO:0016787 Reactome: R-HSA-6798695 PhaeoP54_03799 f45adee626364f506c984cd7d5418072 302 SUPERFAMILY SSF53697 111 266 6.67E-14 T 14-10-2018 PhaeoP54_03799 f45adee626364f506c984cd7d5418072 302 SUPERFAMILY SSF46689 12 86 1.97E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PhaeoP54_03799 f45adee626364f506c984cd7d5418072 302 Gene3D G3DSA:1.10.10.10 8 86 2.9E-9 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_03799 f45adee626364f506c984cd7d5418072 302 Gene3D G3DSA:3.40.50.10490 109 290 3.1E-22 T 14-10-2018 PhaeoP54_03799 f45adee626364f506c984cd7d5418072 302 Pfam PF01380 SIS domain 139 227 8.5E-9 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 PhaeoP54_00829 ce817f2779005de7f4c2759b6ab37b09 334 Pfam PF00990 Diguanylate cyclase, GGDEF domain 165 319 1.4E-40 T 14-10-2018 IPR000160 GGDEF domain PhaeoP54_00829 ce817f2779005de7f4c2759b6ab37b09 334 Gene3D G3DSA:3.30.70.270 160 334 3.1E-49 T 14-10-2018 PhaeoP54_00829 ce817f2779005de7f4c2759b6ab37b09 334 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 162 322 1.3E-38 T 14-10-2018 IPR000160 GGDEF domain PhaeoP54_00829 ce817f2779005de7f4c2759b6ab37b09 334 SUPERFAMILY SSF55073 170 326 3.37E-44 T 14-10-2018 IPR029787 Nucleotide cyclase PhaeoP54_00829 ce817f2779005de7f4c2759b6ab37b09 334 SMART SM00267 154 324 3.3E-50 T 14-10-2018 IPR000160 GGDEF domain PhaeoP54_00504 856be04d068366cc93a08fb9ba76d96b 237 PRINTS PR01399 Enterobactin synthetase component D signature 53 73 3.3E-18 T 14-10-2018 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 PhaeoP54_00504 856be04d068366cc93a08fb9ba76d96b 237 PRINTS PR01399 Enterobactin synthetase component D signature 157 173 3.3E-18 T 14-10-2018 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 PhaeoP54_00504 856be04d068366cc93a08fb9ba76d96b 237 PRINTS PR01399 Enterobactin synthetase component D signature 83 101 3.3E-18 T 14-10-2018 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 PhaeoP54_00504 856be04d068366cc93a08fb9ba76d96b 237 SUPERFAMILY SSF56214 115 185 1.13E-10 T 14-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 PhaeoP54_00504 856be04d068366cc93a08fb9ba76d96b 237 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 117 185 7.6E-10 T 14-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 PhaeoP54_00504 856be04d068366cc93a08fb9ba76d96b 237 Gene3D G3DSA:3.90.470.20 41 131 8.8E-6 T 14-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 PhaeoP54_00875 fea51e82ac1f3c2e1f31ae473eeb2b3b 197 Gene3D G3DSA:3.20.20.70 2 196 2.5E-56 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PhaeoP54_00875 fea51e82ac1f3c2e1f31ae473eeb2b3b 197 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 11 189 9.9E-46 T 14-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 PhaeoP54_00875 fea51e82ac1f3c2e1f31ae473eeb2b3b 197 Pfam PF02581 Thiamine monophosphate synthase 11 178 1.7E-48 T 14-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 PhaeoP54_00875 fea51e82ac1f3c2e1f31ae473eeb2b3b 197 SUPERFAMILY SSF51391 3 194 1.31E-59 T 14-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 PhaeoP54_03350 d9c03e96c8ff9c3d96ad165cdf5821b4 308 SUPERFAMILY SSF52768 2 305 9.11E-99 T 14-10-2018 IPR023696 Ureohydrolase domain superfamily PhaeoP54_03350 d9c03e96c8ff9c3d96ad165cdf5821b4 308 PRINTS PR01270 Histone deacetylase superfamily signature 233 243 3.8E-16 T 14-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 PhaeoP54_03350 d9c03e96c8ff9c3d96ad165cdf5821b4 308 PRINTS PR01270 Histone deacetylase superfamily signature 118 141 3.8E-16 T 14-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 PhaeoP54_03350 d9c03e96c8ff9c3d96ad165cdf5821b4 308 PRINTS PR01270 Histone deacetylase superfamily signature 152 167 3.8E-16 T 14-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 PhaeoP54_03350 d9c03e96c8ff9c3d96ad165cdf5821b4 308 Pfam PF00850 Histone deacetylase domain 20 302 3.5E-77 T 14-10-2018 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 PhaeoP54_03350 d9c03e96c8ff9c3d96ad165cdf5821b4 308 Gene3D G3DSA:3.40.800.20 1 306 8.0E-108 T 14-10-2018 IPR037138 Histone deacetylase domain superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 PhaeoP54_00652 1c1c92168a6187680ba926e115f6c2d1 326 Pfam PF00005 ABC transporter 26 183 2.6E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PhaeoP54_00652 1c1c92168a6187680ba926e115f6c2d1 326 Gene3D G3DSA:3.40.50.300 3 324 5.6E-96 T 14-10-2018 PhaeoP54_00652 1c1c92168a6187680ba926e115f6c2d1 326 SMART SM00382 34 233 1.1E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_00652 1c1c92168a6187680ba926e115f6c2d1 326 SUPERFAMILY SSF52540 34 307 7.03E-65 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_00652 1c1c92168a6187680ba926e115f6c2d1 326 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 234 317 7.3E-23 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 PhaeoP54_00652 1c1c92168a6187680ba926e115f6c2d1 326 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 236 299 5.0E-18 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 PhaeoP54_00652 1c1c92168a6187680ba926e115f6c2d1 326 ProSitePatterns PS00211 ABC transporters family signature. 156 170 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PhaeoP54_01879 0409f7c2f18505d249464785454bf2b7 157 Pfam PF04364 DNA polymerase III chi subunit, HolC 1 136 4.6E-28 T 14-10-2018 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 PhaeoP54_01879 0409f7c2f18505d249464785454bf2b7 157 Gene3D G3DSA:3.40.50.10110 1 139 9.4E-16 T 14-10-2018 IPR036768 DNA polymerase III subunit chi superfamily PhaeoP54_01879 0409f7c2f18505d249464785454bf2b7 157 SUPERFAMILY SSF102400 1 140 3.53E-35 T 14-10-2018 IPR036768 DNA polymerase III subunit chi superfamily PhaeoP54_03936 dd5d617787d9787478b7f14279388f60 322 TIGRFAM TIGR00510 lipA: lipoyl synthase 12 304 9.3E-111 T 14-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 PhaeoP54_03936 dd5d617787d9787478b7f14279388f60 322 SUPERFAMILY SSF102114 40 299 1.83E-60 T 14-10-2018 PhaeoP54_03936 dd5d617787d9787478b7f14279388f60 322 Hamap MF_00206 Lipoyl synthase [lipA]. 1 308 147.762 T 14-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 PhaeoP54_03936 dd5d617787d9787478b7f14279388f60 322 SMART SM00729 70 278 9.6E-13 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 PhaeoP54_03936 dd5d617787d9787478b7f14279388f60 322 PIRSF PIRSF005963 3 317 2.1E-129 T 14-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 PhaeoP54_03936 dd5d617787d9787478b7f14279388f60 322 Pfam PF04055 Radical SAM superfamily 76 236 1.4E-10 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 PhaeoP54_03936 dd5d617787d9787478b7f14279388f60 322 Gene3D G3DSA:3.20.20.70 68 287 2.9E-19 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PhaeoP54_04030 878350ff9308b6b059ab920881734854 612 SUPERFAMILY SSF110849 14 108 2.79E-12 T 14-10-2018 IPR036086 ParB/Sulfiredoxin superfamily PhaeoP54_04030 878350ff9308b6b059ab920881734854 612 Gene3D G3DSA:3.90.1530.30 25 88 5.0E-7 T 14-10-2018 PhaeoP54_04030 878350ff9308b6b059ab920881734854 612 Gene3D G3DSA:1.10.10.2830 93 198 3.8E-16 T 14-10-2018 PhaeoP54_04030 878350ff9308b6b059ab920881734854 612 SMART SM00470 12 106 1.6E-5 T 14-10-2018 IPR003115 ParB/Sulfiredoxin PhaeoP54_04030 878350ff9308b6b059ab920881734854 612 SUPERFAMILY SSF109709 100 194 4.97E-17 T 14-10-2018 PhaeoP54_04030 878350ff9308b6b059ab920881734854 612 Pfam PF02195 ParB-like nuclease domain 15 105 2.0E-8 T 14-10-2018 IPR003115 ParB/Sulfiredoxin PhaeoP54_03158 23e2952b0670abc7ab614c3801566684 228 Pfam PF02798 Glutathione S-transferase, N-terminal domain 3 77 5.5E-18 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 PhaeoP54_03158 23e2952b0670abc7ab614c3801566684 228 SUPERFAMILY SSF52833 2 79 1.91E-23 T 14-10-2018 IPR036249 Thioredoxin-like superfamily PhaeoP54_03158 23e2952b0670abc7ab614c3801566684 228 Gene3D G3DSA:3.40.30.10 6 80 5.2E-25 T 14-10-2018 PhaeoP54_03158 23e2952b0670abc7ab614c3801566684 228 Gene3D G3DSA:1.20.1050.10 85 223 1.9E-34 T 14-10-2018 PhaeoP54_03158 23e2952b0670abc7ab614c3801566684 228 SUPERFAMILY SSF47616 82 217 1.42E-22 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily PhaeoP54_03158 23e2952b0670abc7ab614c3801566684 228 TIGRFAM TIGR01262 maiA: maleylacetoacetate isomerase 5 216 4.7E-68 T 14-10-2018 IPR005955 Glutathione S-transferases, class Zeta GO:0003824|GO:0005737|GO:0009072 Reactome: R-HSA-156590|Reactome: R-HSA-204174|Reactome: R-HSA-71182 PhaeoP54_01741 447f7b1803c8359f27477c170bf8f1ff 180 Pfam PF04519 Polymer-forming cytoskeletal 48 141 4.4E-24 T 14-10-2018 IPR007607 Bactofilin A/B PhaeoP54_00045 813f395924f3a91878aa027c9f1d9fc9 129 Pfam PF02962 5-carboxymethyl-2-hydroxymuconate isomerase 2 113 5.8E-16 T 14-10-2018 IPR004220 5-carboxymethyl-2-hydroxymuconate isomerase GO:0008704|GO:0019439 KEGG: 00350+5.3.3.10 PhaeoP54_00045 813f395924f3a91878aa027c9f1d9fc9 129 Gene3D G3DSA:3.30.429.10 1 128 2.3E-39 T 14-10-2018 IPR014347 Tautomerase/MIF superfamily PhaeoP54_00045 813f395924f3a91878aa027c9f1d9fc9 129 SUPERFAMILY SSF55331 2 125 2.6E-35 T 14-10-2018 IPR014347 Tautomerase/MIF superfamily PhaeoP54_01064 3fa6b8ed47277e5c4c3343f241b6a862 226 Pfam PF00156 Phosphoribosyl transferase domain 76 163 6.0E-11 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 PhaeoP54_01064 3fa6b8ed47277e5c4c3343f241b6a862 226 Gene3D G3DSA:3.40.50.2020 5 226 1.7E-62 T 14-10-2018 PhaeoP54_01064 3fa6b8ed47277e5c4c3343f241b6a862 226 SUPERFAMILY SSF53271 18 223 6.42E-46 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like PhaeoP54_01064 3fa6b8ed47277e5c4c3343f241b6a862 226 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 226 28.082 T 14-10-2018 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 PhaeoP54_01381 2495517c513315bf4c79459ca5930288 478 TIGRFAM TIGR01312 XylB: xylulokinase 3 469 8.6E-162 T 14-10-2018 IPR006000 Xylulokinase GO:0004856|GO:0005997 KEGG: 00040+2.7.1.17 PhaeoP54_01381 2495517c513315bf4c79459ca5930288 478 Gene3D G3DSA:3.30.420.40 242 478 9.7E-71 T 14-10-2018 PhaeoP54_01381 2495517c513315bf4c79459ca5930288 478 SUPERFAMILY SSF53067 242 472 2.19E-56 T 14-10-2018 PhaeoP54_01381 2495517c513315bf4c79459ca5930288 478 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 346 366 - T 14-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 PhaeoP54_01381 2495517c513315bf4c79459ca5930288 478 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 251 434 8.7E-35 T 14-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 PhaeoP54_01381 2495517c513315bf4c79459ca5930288 478 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 125 137 - T 14-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 PhaeoP54_01381 2495517c513315bf4c79459ca5930288 478 SUPERFAMILY SSF53067 2 243 1.3E-67 T 14-10-2018 PhaeoP54_01381 2495517c513315bf4c79459ca5930288 478 Gene3D G3DSA:3.30.420.40 1 241 4.1E-79 T 14-10-2018 PhaeoP54_01381 2495517c513315bf4c79459ca5930288 478 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 1 240 1.5E-64 T 14-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 PhaeoP54_01381 2495517c513315bf4c79459ca5930288 478 PIRSF PIRSF000538 1 477 9.7E-124 T 14-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 PhaeoP54_01817 d1d627a654e44c76cc7768355386e2e0 311 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 22 293 1.7E-43 T 14-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 PhaeoP54_00005 fd3b88256b65cc4398114f2c7fb43598 199 SUPERFAMILY SSF46689 3 77 4.98E-16 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PhaeoP54_00005 fd3b88256b65cc4398114f2c7fb43598 199 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 62 2.6E-13 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PhaeoP54_00005 fd3b88256b65cc4398114f2c7fb43598 199 Gene3D G3DSA:1.10.357.10 1 189 8.4E-28 T 14-10-2018 PhaeoP54_00005 fd3b88256b65cc4398114f2c7fb43598 199 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 2.5E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PhaeoP54_00005 fd3b88256b65cc4398114f2c7fb43598 199 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 2.5E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PhaeoP54_00214 2e4f197e349a6b9d2e716292b79f9868 788 Pfam PF00005 ABC transporter 578 722 1.2E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PhaeoP54_00214 2e4f197e349a6b9d2e716292b79f9868 788 SUPERFAMILY SSF90123 229 535 2.88E-45 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 PhaeoP54_00214 2e4f197e349a6b9d2e716292b79f9868 788 SMART SM00382 582 775 8.4E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_00214 2e4f197e349a6b9d2e716292b79f9868 788 Gene3D G3DSA:3.40.50.300 547 787 1.8E-63 T 14-10-2018 PhaeoP54_00214 2e4f197e349a6b9d2e716292b79f9868 788 Pfam PF00664 ABC transporter transmembrane region 244 502 2.6E-19 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 PhaeoP54_00214 2e4f197e349a6b9d2e716292b79f9868 788 SUPERFAMILY SSF52540 548 780 1.46E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_00214 2e4f197e349a6b9d2e716292b79f9868 788 Gene3D G3DSA:1.20.1560.10 229 541 4.5E-43 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 PhaeoP54_02829 c769e630e7e49abf078dae1ba6f4667b 438 Gene3D G3DSA:2.40.30.170 326 415 1.6E-10 T 14-10-2018 PhaeoP54_02829 c769e630e7e49abf078dae1ba6f4667b 438 Gene3D G3DSA:2.40.50.100 58 123 3.7E-7 T 14-10-2018 PhaeoP54_02829 c769e630e7e49abf078dae1ba6f4667b 438 Pfam PF13533 Biotin-lipoyl like 62 101 8.7E-6 T 14-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain PhaeoP54_02829 c769e630e7e49abf078dae1ba6f4667b 438 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 67 87 4.8E-45 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 PhaeoP54_02829 c769e630e7e49abf078dae1ba6f4667b 438 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 358 381 4.8E-45 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 PhaeoP54_02829 c769e630e7e49abf078dae1ba6f4667b 438 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 25 48 4.8E-45 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 PhaeoP54_02829 c769e630e7e49abf078dae1ba6f4667b 438 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 402 417 4.8E-45 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 PhaeoP54_02829 c769e630e7e49abf078dae1ba6f4667b 438 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 417 437 4.8E-45 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 PhaeoP54_02829 c769e630e7e49abf078dae1ba6f4667b 438 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 301 322 4.8E-45 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 PhaeoP54_02829 c769e630e7e49abf078dae1ba6f4667b 438 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 334 358 4.8E-45 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 PhaeoP54_02829 c769e630e7e49abf078dae1ba6f4667b 438 Gene3D G3DSA:2.40.50.100 289 325 1.6E-10 T 14-10-2018 PhaeoP54_02829 c769e630e7e49abf078dae1ba6f4667b 438 Pfam PF13437 HlyD family secretion protein 289 395 3.8E-13 T 14-10-2018 PhaeoP54_02829 c769e630e7e49abf078dae1ba6f4667b 438 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 16 437 8.0E-106 T 14-10-2018 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 PhaeoP54_02829 c769e630e7e49abf078dae1ba6f4667b 438 Gene3D G3DSA:1.10.287.470 163 288 1.6E-10 T 14-10-2018 PhaeoP54_03921 dbde10b274e188cb1103019ae32275d8 581 Pfam PF04183 IucA / IucC family 140 373 1.8E-68 T 14-10-2018 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal GO:0019290 PhaeoP54_03921 dbde10b274e188cb1103019ae32275d8 581 Pfam PF06276 Ferric iron reductase FhuF-like transporter 395 555 9.0E-28 T 14-10-2018 IPR022770 Ferric iron reductase FhuF domain PhaeoP54_03921 dbde10b274e188cb1103019ae32275d8 581 Gene3D G3DSA:1.10.510.40 365 574 8.0E-54 T 14-10-2018 PhaeoP54_00748 feb36f4b8ae799caede9ab80ddea7b6a 384 Gene3D G3DSA:3.30.70.360 175 292 1.2E-98 T 14-10-2018 PhaeoP54_00748 feb36f4b8ae799caede9ab80ddea7b6a 384 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 101 138 - T 14-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 PhaeoP54_00748 feb36f4b8ae799caede9ab80ddea7b6a 384 TIGRFAM TIGR01892 AcOrn-deacetyl: acetylornithine deacetylase (ArgE) 8 378 4.8E-116 T 14-10-2018 IPR010169 Acetylornithine deacetylase ArgE GO:0005737|GO:0006526|GO:0008777 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154 PhaeoP54_00748 feb36f4b8ae799caede9ab80ddea7b6a 384 Pfam PF01546 Peptidase family M20/M25/M40 68 379 6.1E-37 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 PhaeoP54_00748 feb36f4b8ae799caede9ab80ddea7b6a 384 Pfam PF07687 Peptidase dimerisation domain 172 281 2.2E-18 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain PhaeoP54_00748 feb36f4b8ae799caede9ab80ddea7b6a 384 Gene3D G3DSA:3.40.630.10 12 368 1.2E-98 T 14-10-2018 PhaeoP54_00748 feb36f4b8ae799caede9ab80ddea7b6a 384 SUPERFAMILY SSF53187 2 383 1.89E-62 T 14-10-2018 PhaeoP54_00748 feb36f4b8ae799caede9ab80ddea7b6a 384 SUPERFAMILY SSF55031 175 281 6.43E-19 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain PhaeoP54_01123 ace8cb83c6cc1630e36f09074dfb86f0 91 Pfam PF05433 Glycine zipper 2TM domain 31 70 1.4E-5 T 14-10-2018 IPR008816 Glycine zipper 2TM domain GO:0019867 PhaeoP54_00210 6987c66f7b4a28097f8f32e621e73beb 134 SUPERFAMILY SSF46955 4 123 5.49E-25 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily PhaeoP54_00210 6987c66f7b4a28097f8f32e621e73beb 134 Gene3D G3DSA:1.10.1660.10 1 121 2.1E-25 T 14-10-2018 PhaeoP54_00210 6987c66f7b4a28097f8f32e621e73beb 134 Pfam PF13411 MerR HTH family regulatory protein 4 69 1.5E-13 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PhaeoP54_00210 6987c66f7b4a28097f8f32e621e73beb 134 SMART SM00422 4 72 8.8E-13 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PhaeoP54_00210 6987c66f7b4a28097f8f32e621e73beb 134 ProSitePatterns PS00552 MerR-type HTH domain signature. 7 29 - T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PhaeoP54_00387 a4a8dad48d04bac6770bf5c858c9d7f4 499 SUPERFAMILY SSF56801 3 496 1.27E-127 T 14-10-2018 PhaeoP54_00387 a4a8dad48d04bac6770bf5c858c9d7f4 499 Pfam PF00501 AMP-binding enzyme 9 400 1.2E-88 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 PhaeoP54_00387 a4a8dad48d04bac6770bf5c858c9d7f4 499 Gene3D G3DSA:3.30.300.30 395 497 1.9E-24 T 14-10-2018 PhaeoP54_00387 a4a8dad48d04bac6770bf5c858c9d7f4 499 ProSitePatterns PS00455 Putative AMP-binding domain signature. 155 166 - T 14-10-2018 IPR020845 AMP-binding, conserved site PhaeoP54_00387 a4a8dad48d04bac6770bf5c858c9d7f4 499 Pfam PF13193 AMP-binding enzyme C-terminal domain 410 484 9.7E-14 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain PhaeoP54_00387 a4a8dad48d04bac6770bf5c858c9d7f4 499 Gene3D G3DSA:3.40.50.12780 1 394 2.0E-99 T 14-10-2018 PhaeoP54_00387 a4a8dad48d04bac6770bf5c858c9d7f4 499 ProSitePatterns PS00414 Profilin signature. 1 9 - T 14-10-2018 IPR027310 Profilin conserved site GO:0003779 Reactome: R-HSA-376176|Reactome: R-HSA-5663220 PhaeoP54_03515 4b5c03a68b62fef3a17431d3c8145ca3 138 TIGRFAM TIGR03170 flgA_cterm: flagella basal body P-ring formation protein FlgA 15 138 5.8E-33 T 14-10-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal PhaeoP54_03515 4b5c03a68b62fef3a17431d3c8145ca3 138 Pfam PF13144 Chaperone for flagella basal body P-ring formation 17 137 1.0E-26 T 14-10-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal PhaeoP54_03515 4b5c03a68b62fef3a17431d3c8145ca3 138 Gene3D G3DSA:2.30.30.760 79 138 2.2E-10 T 14-10-2018 PhaeoP54_03515 4b5c03a68b62fef3a17431d3c8145ca3 138 SMART SM00858 18 76 3.4E-7 T 14-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 PhaeoP54_01767 a2b33067a3ce047ecba31ba7086e55eb 316 Pfam PF09931 Uncharacterized conserved protein (DUF2163) 1 170 1.5E-63 T 14-10-2018 IPR019228 Bacteriophage phiJL001, Gp84, N-terminal PhaeoP54_01767 a2b33067a3ce047ecba31ba7086e55eb 316 Pfam PF09356 Phage conserved hypothetical protein BR0599 203 298 3.5E-33 T 14-10-2018 IPR018964 Bacteriophage phiJL001, Gp84, C-terminal PhaeoP54_01767 a2b33067a3ce047ecba31ba7086e55eb 316 TIGRFAM TIGR02218 phg_TIGR02218: phage conserved hypothetical protein BR0599 23 314 1.6E-89 T 14-10-2018 IPR011928 Bacteriophage phiJL001, Gp84 PhaeoP54_03903 20a2082b8c242aef331c0cce32c33cf3 360 SUPERFAMILY SSF110849 82 185 1.01E-16 T 14-10-2018 IPR036086 ParB/Sulfiredoxin superfamily PhaeoP54_03903 20a2082b8c242aef331c0cce32c33cf3 360 SMART SM00470 88 184 7.3E-10 T 14-10-2018 IPR003115 ParB/Sulfiredoxin PhaeoP54_03903 20a2082b8c242aef331c0cce32c33cf3 360 Gene3D G3DSA:3.90.1530.30 102 168 1.1E-9 T 14-10-2018 PhaeoP54_03903 20a2082b8c242aef331c0cce32c33cf3 360 Pfam PF02195 ParB-like nuclease domain 90 181 9.8E-12 T 14-10-2018 IPR003115 ParB/Sulfiredoxin PhaeoP54_02121 e743d18ccbae35cd9e83c0977051fd8d 175 Pfam PF01292 Prokaryotic cytochrome b561 6 168 1.1E-10 T 14-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 PhaeoP54_02121 e743d18ccbae35cd9e83c0977051fd8d 175 SUPERFAMILY SSF81342 7 168 3.61E-11 T 14-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 PhaeoP54_00444 213721c32dfa878acc9da29f44375689 187 Gene3D G3DSA:3.30.1330.60 64 187 2.6E-28 T 14-10-2018 IPR036737 OmpA-like domain superfamily PhaeoP54_00444 213721c32dfa878acc9da29f44375689 187 SUPERFAMILY SSF103088 79 184 1.96E-27 T 14-10-2018 IPR036737 OmpA-like domain superfamily PhaeoP54_00444 213721c32dfa878acc9da29f44375689 187 Pfam PF00691 OmpA family 89 179 8.1E-16 T 14-10-2018 IPR006665 OmpA-like domain PhaeoP54_02018 aa6eb0c845c7012b64935817fa2cb6aa 345 Pfam PF00296 Luciferase-like monooxygenase 1 314 8.3E-48 T 14-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 PhaeoP54_02018 aa6eb0c845c7012b64935817fa2cb6aa 345 SUPERFAMILY SSF51679 1 344 9.42E-73 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 PhaeoP54_02018 aa6eb0c845c7012b64935817fa2cb6aa 345 Gene3D G3DSA:3.20.20.30 1 345 2.6E-74 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 PhaeoP54_02016 5bc999fbdc78f0c3bec23e7410772cd5 68 PIRSF PIRSF002599 1 67 2.6E-22 T 14-10-2018 IPR012156 Cold shock, CspA GO:0003676 PhaeoP54_02016 5bc999fbdc78f0c3bec23e7410772cd5 68 PRINTS PR00050 Cold shock protein signature 25 34 4.4E-14 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 PhaeoP54_02016 5bc999fbdc78f0c3bec23e7410772cd5 68 PRINTS PR00050 Cold shock protein signature 40 58 4.4E-14 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 PhaeoP54_02016 5bc999fbdc78f0c3bec23e7410772cd5 68 PRINTS PR00050 Cold shock protein signature 4 19 4.4E-14 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 PhaeoP54_02016 5bc999fbdc78f0c3bec23e7410772cd5 68 Gene3D G3DSA:2.40.50.140 1 65 1.8E-23 T 14-10-2018 PhaeoP54_02016 5bc999fbdc78f0c3bec23e7410772cd5 68 Pfam PF00313 'Cold-shock' DNA-binding domain 3 65 2.0E-23 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 PhaeoP54_02016 5bc999fbdc78f0c3bec23e7410772cd5 68 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 14-10-2018 IPR019844 Cold-shock conserved site PhaeoP54_02016 5bc999fbdc78f0c3bec23e7410772cd5 68 SUPERFAMILY SSF50249 1 66 2.1E-21 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold PhaeoP54_02016 5bc999fbdc78f0c3bec23e7410772cd5 68 SMART SM00357 3 68 1.3E-20 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 PhaeoP54_03534 56d9e5d6294e0218b4ca33aad061e578 154 Gene3D G3DSA:3.40.930.10 1 152 1.3E-43 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 PhaeoP54_03534 56d9e5d6294e0218b4ca33aad061e578 154 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 51 67 - T 14-10-2018 IPR002178 PTS EIIA type-2 domain PhaeoP54_03534 56d9e5d6294e0218b4ca33aad061e578 154 SUPERFAMILY SSF55804 1 147 2.75E-35 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 PhaeoP54_03534 56d9e5d6294e0218b4ca33aad061e578 154 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 6 147 3.4E-28 T 14-10-2018 IPR002178 PTS EIIA type-2 domain PhaeoP54_00453 55525a1c33c39dd17c3617c04f502fd9 254 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 34 254 27.104 T 14-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 PhaeoP54_00453 55525a1c33c39dd17c3617c04f502fd9 254 Pfam PF02390 Putative methyltransferase 83 245 1.9E-38 T 14-10-2018 PhaeoP54_00453 55525a1c33c39dd17c3617c04f502fd9 254 SUPERFAMILY SSF53335 79 252 5.63E-32 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PhaeoP54_00453 55525a1c33c39dd17c3617c04f502fd9 254 Gene3D G3DSA:3.40.50.150 54 254 1.4E-54 T 14-10-2018 PhaeoP54_01509 7ab92ff108318a492e1307e145b8f57c 403 SUPERFAMILY SSF53335 126 399 4.56E-62 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PhaeoP54_01509 7ab92ff108318a492e1307e145b8f57c 403 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 236 246 3.3E-22 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase PhaeoP54_01509 7ab92ff108318a492e1307e145b8f57c 403 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 296 308 3.3E-22 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase PhaeoP54_01509 7ab92ff108318a492e1307e145b8f57c 403 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 382 399 3.3E-22 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase PhaeoP54_01509 7ab92ff108318a492e1307e145b8f57c 403 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 207 221 3.3E-22 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase PhaeoP54_01509 7ab92ff108318a492e1307e145b8f57c 403 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 346 362 3.3E-22 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase PhaeoP54_01509 7ab92ff108318a492e1307e145b8f57c 403 Pfam PF01189 16S rRNA methyltransferase RsmB/F 226 380 3.1E-31 T 14-10-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 PhaeoP54_01509 7ab92ff108318a492e1307e145b8f57c 403 Gene3D G3DSA:3.40.50.150 124 399 3.9E-64 T 14-10-2018 PhaeoP54_00074 83ded9496917647431529bf7eb1fea44 307 SUPERFAMILY SSF55166 44 306 5.65E-97 T 14-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 PhaeoP54_00074 83ded9496917647431529bf7eb1fea44 307 Pfam PF03411 Penicillin-insensitive murein endopeptidase 60 305 3.7E-100 T 14-10-2018 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase GO:0004252|GO:0006508|GO:0030288 PhaeoP54_00074 83ded9496917647431529bf7eb1fea44 307 PIRSF PIRSF018455 10 307 1.5E-103 T 14-10-2018 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase GO:0004252|GO:0006508|GO:0030288 PhaeoP54_00074 83ded9496917647431529bf7eb1fea44 307 Gene3D G3DSA:3.30.1380.10 46 307 6.3E-89 T 14-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 PhaeoP54_03775 d1558bd8cd43decf179b976648250ee4 416 Pfam PF02687 FtsX-like permease family 314 407 2.0E-10 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 PhaeoP54_03775 d1558bd8cd43decf179b976648250ee4 416 Pfam PF12704 MacB-like periplasmic core domain 19 208 5.6E-14 T 14-10-2018 IPR025857 MacB-like periplasmic core domain PhaeoP54_01148 2046282a8ac21c48a66e2f676a529ce8 175 SUPERFAMILY SSF54637 22 168 4.98E-38 T 14-10-2018 IPR029069 HotDog domain superfamily PhaeoP54_01148 2046282a8ac21c48a66e2f676a529ce8 175 Pfam PF03061 Thioesterase superfamily 82 152 2.2E-13 T 14-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 PhaeoP54_01148 2046282a8ac21c48a66e2f676a529ce8 175 Gene3D G3DSA:3.10.129.10 33 172 1.1E-33 T 14-10-2018 PhaeoP54_01148 2046282a8ac21c48a66e2f676a529ce8 175 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 55 168 2.4E-15 T 14-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 PhaeoP54_01620 db57faa25f8cf79b154e611f0e716b3d 141 SMART SM00344 1 107 2.0E-14 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 PhaeoP54_01620 db57faa25f8cf79b154e611f0e716b3d 141 Gene3D G3DSA:1.10.10.10 1 52 5.5E-15 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_01620 db57faa25f8cf79b154e611f0e716b3d 141 SUPERFAMILY SSF46785 1 57 2.78E-10 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_01620 db57faa25f8cf79b154e611f0e716b3d 141 Gene3D G3DSA:3.30.70.920 53 141 1.4E-12 T 14-10-2018 PhaeoP54_01620 db57faa25f8cf79b154e611f0e716b3d 141 Pfam PF13404 AsnC-type helix-turn-helix domain 1 42 5.5E-13 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 PhaeoP54_01620 db57faa25f8cf79b154e611f0e716b3d 141 Pfam PF01037 Lrp/AsnC ligand binding domain 69 136 1.3E-9 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain PhaeoP54_01620 db57faa25f8cf79b154e611f0e716b3d 141 SUPERFAMILY SSF54909 63 140 3.89E-12 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel PhaeoP54_01620 db57faa25f8cf79b154e611f0e716b3d 141 ProSitePatterns PS00519 AsnC-type HTH domain signature. 19 45 - T 14-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site PhaeoP54_01620 db57faa25f8cf79b154e611f0e716b3d 141 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 1 17 4.3E-10 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 PhaeoP54_01620 db57faa25f8cf79b154e611f0e716b3d 141 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 47 4.3E-10 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 PhaeoP54_01620 db57faa25f8cf79b154e611f0e716b3d 141 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 17 28 4.3E-10 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 PhaeoP54_00728 e1e5937495c6d398d6d7ed56be23fdc7 238 Gene3D G3DSA:3.30.110.170 33 230 2.2E-61 T 14-10-2018 PhaeoP54_00728 e1e5937495c6d398d6d7ed56be23fdc7 238 Pfam PF04402 Protein of unknown function (DUF541) 31 230 4.3E-50 T 14-10-2018 IPR007497 Protein of unknown function DUF541 PhaeoP54_00728 e1e5937495c6d398d6d7ed56be23fdc7 238 Gene3D G3DSA:3.30.70.2970 43 153 2.2E-61 T 14-10-2018 PhaeoP54_02555 71b277decaef761ac1fefde585f557f0 136 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 3 124 5.8E-6 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain PhaeoP54_02555 71b277decaef761ac1fefde585f557f0 136 SUPERFAMILY SSF54593 1 126 8.46E-24 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PhaeoP54_02555 71b277decaef761ac1fefde585f557f0 136 Gene3D G3DSA:3.10.180.10 1 132 4.5E-34 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PhaeoP54_03859 12cf796ef0976c24a64edc23b85124c0 231 Pfam PF03524 Conjugal transfer protein 31 222 2.1E-49 T 14-10-2018 IPR010258 Conjugal transfer, TrbG/VirB9/CagX PhaeoP54_03859 12cf796ef0976c24a64edc23b85124c0 231 Gene3D G3DSA:2.60.40.2500 126 229 4.4E-26 T 14-10-2018 IPR038161 VirB9/CagX/TrbG, C-terminal domain superfamily PhaeoP54_02475 ebfb4243f7edb0db07e27f09754fc033 93 SUPERFAMILY SSF54909 2 91 1.84E-18 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel PhaeoP54_02475 ebfb4243f7edb0db07e27f09754fc033 93 Gene3D G3DSA:3.30.70.100 1 92 1.4E-21 T 14-10-2018 PhaeoP54_02475 ebfb4243f7edb0db07e27f09754fc033 93 Pfam PF07045 Domain of unknown function (DUF1330) 2 91 2.2E-19 T 14-10-2018 IPR010753 Domain of unknown function DUF1330 PhaeoP54_02032 80df19dd8decf5efc156f030f60c4b1d 165 Pfam PF13463 Winged helix DNA-binding domain 50 114 7.4E-16 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PhaeoP54_02032 80df19dd8decf5efc156f030f60c4b1d 165 SMART SM00347 42 146 2.7E-11 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PhaeoP54_02032 80df19dd8decf5efc156f030f60c4b1d 165 Gene3D G3DSA:1.10.10.10 18 157 1.8E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_02032 80df19dd8decf5efc156f030f60c4b1d 165 SUPERFAMILY SSF46785 14 157 1.18E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_01895 28a2e78dc3cc5b44b460341c03e5ea5d 397 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 17 375 5.0E-105 T 14-10-2018 IPR017439 Amidohydrolase GO:0016787 PhaeoP54_01895 28a2e78dc3cc5b44b460341c03e5ea5d 397 Pfam PF01546 Peptidase family M20/M25/M40 78 385 2.1E-33 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 PhaeoP54_01895 28a2e78dc3cc5b44b460341c03e5ea5d 397 PIRSF PIRSF005962 3 390 2.3E-121 T 14-10-2018 IPR017439 Amidohydrolase GO:0016787 PhaeoP54_01895 28a2e78dc3cc5b44b460341c03e5ea5d 397 Gene3D G3DSA:3.30.70.360 186 300 3.1E-132 T 14-10-2018 PhaeoP54_01895 28a2e78dc3cc5b44b460341c03e5ea5d 397 SUPERFAMILY SSF55031 189 296 7.33E-32 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain PhaeoP54_01895 28a2e78dc3cc5b44b460341c03e5ea5d 397 Gene3D G3DSA:3.40.630.10 17 371 3.1E-132 T 14-10-2018 PhaeoP54_01895 28a2e78dc3cc5b44b460341c03e5ea5d 397 Pfam PF07687 Peptidase dimerisation domain 190 287 8.9E-12 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain PhaeoP54_01895 28a2e78dc3cc5b44b460341c03e5ea5d 397 SUPERFAMILY SSF53187 2 386 5.54E-79 T 14-10-2018 PhaeoP54_00562 82177afcf48418c974128677cfc9feec 162 TIGRFAM TIGR02801 tolR: protein TolR 25 146 9.4E-40 T 14-10-2018 IPR014168 Tol-Pal system protein TolR GO:0015031|GO:0016021 PhaeoP54_00562 82177afcf48418c974128677cfc9feec 162 Gene3D G3DSA:3.30.420.270 74 143 2.4E-20 T 14-10-2018 PhaeoP54_00562 82177afcf48418c974128677cfc9feec 162 Pfam PF02472 Biopolymer transport protein ExbD/TolR 22 146 6.9E-27 T 14-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 PhaeoP54_01850 79e5b9d1014e4856b178292bfdf6aee1 109 Pfam PF04267 Sarcosine oxidase, delta subunit family 4 82 5.6E-29 T 14-10-2018 IPR006279 Sarcosine oxidase, delta subunit, heterotetrameric GO:0008115|GO:0046653 KEGG: 00260+1.5.3.1|MetaCyc: PWY-3661|MetaCyc: PWY-4722 PhaeoP54_01850 79e5b9d1014e4856b178292bfdf6aee1 109 Gene3D G3DSA:3.30.2270.10 1 98 6.9E-31 T 14-10-2018 IPR038561 Sarcosine oxidase subunit delta superfamily KEGG: 00260+1.5.3.1|MetaCyc: PWY-3661|MetaCyc: PWY-4722 PhaeoP54_01155 6468afc1aacdb8ee4c7725b0290a36f6 157 Gene3D G3DSA:1.10.10.10 2 61 1.7E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_01155 6468afc1aacdb8ee4c7725b0290a36f6 157 ProSitePatterns PS00519 AsnC-type HTH domain signature. 26 52 - T 14-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site PhaeoP54_01155 6468afc1aacdb8ee4c7725b0290a36f6 157 SUPERFAMILY SSF46785 4 99 2.49E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_01155 6468afc1aacdb8ee4c7725b0290a36f6 157 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 8 24 2.1E-16 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 PhaeoP54_01155 6468afc1aacdb8ee4c7725b0290a36f6 157 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 24 35 2.1E-16 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 PhaeoP54_01155 6468afc1aacdb8ee4c7725b0290a36f6 157 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 35 54 2.1E-16 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 PhaeoP54_01155 6468afc1aacdb8ee4c7725b0290a36f6 157 Pfam PF13412 Winged helix-turn-helix DNA-binding 8 55 5.4E-16 T 14-10-2018 PhaeoP54_01155 6468afc1aacdb8ee4c7725b0290a36f6 157 SUPERFAMILY SSF54909 68 153 5.5E-18 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel PhaeoP54_01155 6468afc1aacdb8ee4c7725b0290a36f6 157 Pfam PF01037 Lrp/AsnC ligand binding domain 74 147 2.7E-19 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain PhaeoP54_01155 6468afc1aacdb8ee4c7725b0290a36f6 157 Gene3D G3DSA:3.30.70.920 62 144 2.1E-22 T 14-10-2018 PhaeoP54_01155 6468afc1aacdb8ee4c7725b0290a36f6 157 SMART SM00344 8 117 5.2E-45 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 PhaeoP54_00405 b411c05df7a8695941f203fd562702da 159 SUPERFAMILY SSF53335 4 132 1.22E-8 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PhaeoP54_00405 b411c05df7a8695941f203fd562702da 159 Gene3D G3DSA:3.40.50.150 1 158 1.7E-55 T 14-10-2018 PhaeoP54_00405 b411c05df7a8695941f203fd562702da 159 Pfam PF12692 S-adenosyl-L-methionine methyltransferase 1 157 7.4E-69 T 14-10-2018 IPR025690 Methyltransferase, putative PhaeoP54_00342 fd236d189276089087ba0c9334d5afcf 209 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 25 172 3.3E-14 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 PhaeoP54_00342 fd236d189276089087ba0c9334d5afcf 209 SUPERFAMILY SSF53254 25 182 1.16E-20 T 14-10-2018 IPR029033 Histidine phosphatase superfamily PhaeoP54_00342 fd236d189276089087ba0c9334d5afcf 209 Gene3D G3DSA:3.40.50.1240 2 192 1.5E-32 T 14-10-2018 IPR029033 Histidine phosphatase superfamily PhaeoP54_01974 1ca31d6763ce0eb0a4ff14ab1dfb4c3e 250 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 7 236 9.5E-55 T 14-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 PhaeoP54_01974 1ca31d6763ce0eb0a4ff14ab1dfb4c3e 250 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 2 245 56.134 T 14-10-2018 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 PhaeoP54_01974 1ca31d6763ce0eb0a4ff14ab1dfb4c3e 250 Pfam PF00121 Triosephosphate isomerase 5 243 3.0E-82 T 14-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 PhaeoP54_01974 1ca31d6763ce0eb0a4ff14ab1dfb4c3e 250 Gene3D G3DSA:3.20.20.70 1 248 2.8E-92 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PhaeoP54_01974 1ca31d6763ce0eb0a4ff14ab1dfb4c3e 250 ProSitePatterns PS00171 Triosephosphate isomerase active site. 161 171 - T 14-10-2018 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 PhaeoP54_01974 1ca31d6763ce0eb0a4ff14ab1dfb4c3e 250 SUPERFAMILY SSF51351 1 245 1.07E-87 T 14-10-2018 IPR035990 Triosephosphate isomerase superfamily GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 PhaeoP54_03517 e22a7fb7f4e837461ca650e61225b86c 238 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 168 232 6.0E-14 T 14-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain PhaeoP54_03517 e22a7fb7f4e837461ca650e61225b86c 238 SUPERFAMILY SSF117143 77 196 2.09E-19 T 14-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like PhaeoP54_03517 e22a7fb7f4e837461ca650e61225b86c 238 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 14-10-2018 IPR019776 Flagellar basal body rod protein, conserved site PhaeoP54_03517 e22a7fb7f4e837461ca650e61225b86c 238 TIGRFAM TIGR02490 flgF: flagellar basal-body rod protein FlgF 6 215 7.8E-57 T 14-10-2018 IPR012836 Flagellar basal-body rod FlgF GO:0030694|GO:0071973 PhaeoP54_03517 e22a7fb7f4e837461ca650e61225b86c 238 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 6 120 7.5E-36 T 14-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G PhaeoP54_03517 e22a7fb7f4e837461ca650e61225b86c 238 Pfam PF00460 Flagella basal body rod protein 10 35 4.7E-6 T 14-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 PhaeoP54_01942 e78ad9eb7687825e489273cf316d8442 454 Pfam PF01435 Peptidase family M48 47 232 3.2E-26 T 14-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 PhaeoP54_01942 e78ad9eb7687825e489273cf316d8442 454 SUPERFAMILY SSF48452 281 431 4.01E-16 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 PhaeoP54_01942 e78ad9eb7687825e489273cf316d8442 454 Gene3D G3DSA:3.30.2010.10 40 123 2.5E-8 T 14-10-2018 PhaeoP54_01942 e78ad9eb7687825e489273cf316d8442 454 Gene3D G3DSA:1.25.40.10 221 452 1.1E-17 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 PhaeoP54_01942 e78ad9eb7687825e489273cf316d8442 454 SMART SM00028 279 312 100.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 PhaeoP54_01942 e78ad9eb7687825e489273cf316d8442 454 SMART SM00028 313 346 21.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 PhaeoP54_01942 e78ad9eb7687825e489273cf316d8442 454 SMART SM00028 347 380 46.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 PhaeoP54_01673 fa3fa652dfa1091f570f3abcd10c16b8 342 Gene3D G3DSA:1.20.970.10 7 70 1.5E-19 T 14-10-2018 PhaeoP54_01673 fa3fa652dfa1091f570f3abcd10c16b8 342 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 13 334 2.1E-110 T 14-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 PhaeoP54_01673 fa3fa652dfa1091f570f3abcd10c16b8 342 Pfam PF00591 Glycosyl transferase family, a/b domain 76 325 4.4E-89 T 14-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 PhaeoP54_01673 fa3fa652dfa1091f570f3abcd10c16b8 342 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 6 335 36.335 T 14-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 PhaeoP54_01673 fa3fa652dfa1091f570f3abcd10c16b8 342 SUPERFAMILY SSF52418 76 336 3.53E-92 T 14-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 PhaeoP54_01673 fa3fa652dfa1091f570f3abcd10c16b8 342 Pfam PF02885 Glycosyl transferase family, helical bundle domain 16 66 1.2E-14 T 14-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 PhaeoP54_01673 fa3fa652dfa1091f570f3abcd10c16b8 342 SUPERFAMILY SSF47648 13 69 4.06E-15 T 14-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 PhaeoP54_01673 fa3fa652dfa1091f570f3abcd10c16b8 342 Gene3D G3DSA:3.40.1030.10 72 341 1.7E-100 T 14-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 PhaeoP54_02330 bc124d3a03585c70a183af3a8e957693 234 Pfam PF07264 Etoposide-induced protein 2.4 (EI24) 6 212 5.1E-25 T 14-10-2018 PhaeoP54_02457 7bf46a5b9fae6409dec3984ade6058fc 288 Pfam PF01758 Sodium Bile acid symporter family 14 192 1.6E-28 T 14-10-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 PhaeoP54_02457 7bf46a5b9fae6409dec3984ade6058fc 288 Gene3D G3DSA:1.20.1530.20 2 285 1.5E-60 T 14-10-2018 IPR038770 Sodium/solute symporter superfamily PhaeoP54_00108 25faa003417a7184b36c818f2605b922 277 SUPERFAMILY SSF53474 1 274 7.24E-85 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold PhaeoP54_00108 25faa003417a7184b36c818f2605b922 277 TIGRFAM TIGR02821 fghA_ester_D: S-formylglutathione hydrolase 2 274 1.2E-124 T 14-10-2018 IPR014186 S-formylglutathione hydrolase GO:0018738|GO:0046294 KEGG: 00680+3.1.2.12|MetaCyc: PWY-1801|Reactome: R-HSA-156590 PhaeoP54_00108 25faa003417a7184b36c818f2605b922 277 Gene3D G3DSA:3.40.50.1820 1 276 2.5E-80 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold PhaeoP54_00108 25faa003417a7184b36c818f2605b922 277 Pfam PF00756 Putative esterase 21 267 6.5E-55 T 14-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 PhaeoP54_03326 9537dc0455e5f7ef80d0eabccced26cd 348 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 49 316 2.8E-47 T 14-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 PhaeoP54_03326 9537dc0455e5f7ef80d0eabccced26cd 348 Gene3D G3DSA:3.40.190.170 28 346 1.3E-104 T 14-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily PhaeoP54_02921 0c109287f62360a341d2a05a588abb16 183 Pfam PF00782 Dual specificity phosphatase, catalytic domain 87 169 4.8E-6 T 14-10-2018 IPR000340 Dual specificity phosphatase, catalytic domain GO:0008138|GO:0016311 PhaeoP54_02921 0c109287f62360a341d2a05a588abb16 183 Gene3D G3DSA:3.90.190.10 18 177 3.2E-28 T 14-10-2018 IPR029021 Protein-tyrosine phosphatase-like PhaeoP54_02921 0c109287f62360a341d2a05a588abb16 183 ProSitePatterns PS00383 Tyrosine specific protein phosphatases active site. 124 134 - T 14-10-2018 IPR016130 Protein-tyrosine phosphatase, active site GO:0004725|GO:0016311 PhaeoP54_02921 0c109287f62360a341d2a05a588abb16 183 SUPERFAMILY SSF52799 33 173 3.54E-31 T 14-10-2018 IPR029021 Protein-tyrosine phosphatase-like PhaeoP54_03498 deb18fc3b6b1c8dee2aef1ee68914074 367 Pfam PF02119 Flagellar P-ring protein 24 366 1.5E-132 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 PhaeoP54_03498 deb18fc3b6b1c8dee2aef1ee68914074 367 PRINTS PR01010 Flagellar P-ring protein signature 163 181 3.4E-76 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 PhaeoP54_03498 deb18fc3b6b1c8dee2aef1ee68914074 367 PRINTS PR01010 Flagellar P-ring protein signature 189 207 3.4E-76 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 PhaeoP54_03498 deb18fc3b6b1c8dee2aef1ee68914074 367 PRINTS PR01010 Flagellar P-ring protein signature 106 123 3.4E-76 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 PhaeoP54_03498 deb18fc3b6b1c8dee2aef1ee68914074 367 PRINTS PR01010 Flagellar P-ring protein signature 24 39 3.4E-76 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 PhaeoP54_03498 deb18fc3b6b1c8dee2aef1ee68914074 367 PRINTS PR01010 Flagellar P-ring protein signature 84 103 3.4E-76 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 PhaeoP54_03498 deb18fc3b6b1c8dee2aef1ee68914074 367 PRINTS PR01010 Flagellar P-ring protein signature 39 54 3.4E-76 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 PhaeoP54_03498 deb18fc3b6b1c8dee2aef1ee68914074 367 PRINTS PR01010 Flagellar P-ring protein signature 253 265 3.4E-76 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 PhaeoP54_03498 deb18fc3b6b1c8dee2aef1ee68914074 367 PRINTS PR01010 Flagellar P-ring protein signature 59 74 3.4E-76 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 PhaeoP54_03498 deb18fc3b6b1c8dee2aef1ee68914074 367 PRINTS PR01010 Flagellar P-ring protein signature 123 141 3.4E-76 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 PhaeoP54_03498 deb18fc3b6b1c8dee2aef1ee68914074 367 Hamap MF_00416 Flagellar P-ring protein [flgI]. 4 367 35.066 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 PhaeoP54_01835 85a558f3921fc6df2b0611f195fc9f06 439 SUPERFAMILY SSF50998 69 431 5.05E-69 T 14-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily PhaeoP54_01835 85a558f3921fc6df2b0611f195fc9f06 439 Pfam PF13570 PQQ-like domain 408 438 8.8E-4 T 14-10-2018 IPR025666 Pyrrolo-quinoline quinone-like domain PhaeoP54_01835 85a558f3921fc6df2b0611f195fc9f06 439 SMART SM00564 326 358 130.0 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat PhaeoP54_01835 85a558f3921fc6df2b0611f195fc9f06 439 SMART SM00564 192 224 37.0 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat PhaeoP54_01835 85a558f3921fc6df2b0611f195fc9f06 439 SMART SM00564 152 184 0.0018 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat PhaeoP54_01835 85a558f3921fc6df2b0611f195fc9f06 439 SMART SM00564 379 410 11.0 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat PhaeoP54_01835 85a558f3921fc6df2b0611f195fc9f06 439 SMART SM00564 106 137 18.0 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat PhaeoP54_01835 85a558f3921fc6df2b0611f195fc9f06 439 SMART SM00564 289 320 0.19 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat PhaeoP54_01835 85a558f3921fc6df2b0611f195fc9f06 439 Pfam PF13360 PQQ-like domain 121 356 4.1E-49 T 14-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat PhaeoP54_01835 85a558f3921fc6df2b0611f195fc9f06 439 Gene3D G3DSA:2.130.10.10 78 439 4.9E-76 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 PhaeoP54_03662 c5b7bb6fbabf9b5bc7f2e6e490af30d1 337 Gene3D G3DSA:3.60.40.10 137 332 3.4E-30 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 PhaeoP54_03662 c5b7bb6fbabf9b5bc7f2e6e490af30d1 337 Pfam PF13581 Histidine kinase-like ATPase domain 8 124 1.2E-13 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PhaeoP54_03662 c5b7bb6fbabf9b5bc7f2e6e490af30d1 337 SUPERFAMILY SSF55874 31 128 3.87E-11 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PhaeoP54_03662 c5b7bb6fbabf9b5bc7f2e6e490af30d1 337 SUPERFAMILY SSF81606 139 333 1.2E-16 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 PhaeoP54_03662 c5b7bb6fbabf9b5bc7f2e6e490af30d1 337 SMART SM00331 140 333 2.7E-7 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 PhaeoP54_03662 c5b7bb6fbabf9b5bc7f2e6e490af30d1 337 Gene3D G3DSA:3.30.565.10 5 136 1.0E-19 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PhaeoP54_03662 c5b7bb6fbabf9b5bc7f2e6e490af30d1 337 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 168 301 3.0E-11 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 PhaeoP54_01489 8461b4aa00b4f9f327df008424ed97a7 342 Gene3D G3DSA:3.40.1090.10 1 64 2.7E-11 T 14-10-2018 PhaeoP54_01489 8461b4aa00b4f9f327df008424ed97a7 342 Gene3D G3DSA:3.40.1090.10 133 265 5.5E-10 T 14-10-2018 PhaeoP54_01489 8461b4aa00b4f9f327df008424ed97a7 342 Pfam PF01734 Patatin-like phospholipase 7 207 5.3E-10 T 14-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 PhaeoP54_01489 8461b4aa00b4f9f327df008424ed97a7 342 SUPERFAMILY SSF52151 3 325 1.07E-44 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase PhaeoP54_03055 575f13c0adcb1449174420451cd982fb 191 Gene3D G3DSA:3.30.70.1730 20 150 9.3E-37 T 14-10-2018 PhaeoP54_03055 575f13c0adcb1449174420451cd982fb 191 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 20 177 24.588 T 14-10-2018 IPR022973 Ribosomal protein L10 PhaeoP54_03055 575f13c0adcb1449174420451cd982fb 191 ProSitePatterns PS01109 Ribosomal protein L10 signature. 25 59 - T 14-10-2018 IPR002363 Ribosomal protein L10, eubacterial, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 PhaeoP54_03055 575f13c0adcb1449174420451cd982fb 191 SUPERFAMILY SSF160369 22 187 9.68E-52 T 14-10-2018 PhaeoP54_03055 575f13c0adcb1449174420451cd982fb 191 Pfam PF00466 Ribosomal protein L10 22 117 6.8E-24 T 14-10-2018 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 PhaeoP54_03055 575f13c0adcb1449174420451cd982fb 191 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 14 156 4.0E-4 T 14-10-2018 PhaeoP54_02561 bf58bdf25b91463b52edb094d4f1a21a 378 Pfam PF00899 ThiF family 109 341 5.2E-61 T 14-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 PhaeoP54_02561 bf58bdf25b91463b52edb094d4f1a21a 378 SUPERFAMILY SSF69572 99 350 6.15E-84 T 14-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 PhaeoP54_02561 bf58bdf25b91463b52edb094d4f1a21a 378 Gene3D G3DSA:3.40.50.720 101 351 3.0E-86 T 14-10-2018 PhaeoP54_01685 63d0d07b26fa8eac70f4777c96570630 654 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 315 635 1.2E-113 T 14-10-2018 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal PhaeoP54_01685 63d0d07b26fa8eac70f4777c96570630 654 Pfam PF01578 Cytochrome C assembly protein 89 297 7.6E-53 T 14-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 PhaeoP54_01685 63d0d07b26fa8eac70f4777c96570630 654 TIGRFAM TIGR00353 nrfE: cytochrome c-type biogenesis protein CcmF 53 638 2.5E-184 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 PhaeoP54_01685 63d0d07b26fa8eac70f4777c96570630 654 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 4 28 1.3E-60 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 PhaeoP54_01685 63d0d07b26fa8eac70f4777c96570630 654 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 113 136 1.3E-60 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 PhaeoP54_01685 63d0d07b26fa8eac70f4777c96570630 654 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 313 328 1.3E-60 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 PhaeoP54_01685 63d0d07b26fa8eac70f4777c96570630 654 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 189 204 1.3E-60 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 PhaeoP54_01685 63d0d07b26fa8eac70f4777c96570630 654 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 394 413 1.3E-60 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 PhaeoP54_01685 63d0d07b26fa8eac70f4777c96570630 654 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 628 641 1.3E-60 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 PhaeoP54_01685 63d0d07b26fa8eac70f4777c96570630 654 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 351 368 1.3E-60 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 PhaeoP54_01685 63d0d07b26fa8eac70f4777c96570630 654 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 210 236 3.7E-93 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 PhaeoP54_01685 63d0d07b26fa8eac70f4777c96570630 654 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 274 294 3.7E-93 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 PhaeoP54_01685 63d0d07b26fa8eac70f4777c96570630 654 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 159 181 3.7E-93 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 PhaeoP54_01685 63d0d07b26fa8eac70f4777c96570630 654 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 80 106 3.7E-93 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 PhaeoP54_01685 63d0d07b26fa8eac70f4777c96570630 654 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 310 329 3.7E-93 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 PhaeoP54_01685 63d0d07b26fa8eac70f4777c96570630 654 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 294 310 3.7E-93 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 PhaeoP54_01685 63d0d07b26fa8eac70f4777c96570630 654 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 132 149 3.7E-93 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 PhaeoP54_01685 63d0d07b26fa8eac70f4777c96570630 654 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 244 264 3.7E-93 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 PhaeoP54_02101 537845f5d14791220171277570f7eec5 323 Gene3D G3DSA:3.90.180.10 15 312 2.2E-93 T 14-10-2018 PhaeoP54_02101 537845f5d14791220171277570f7eec5 323 Pfam PF00107 Zinc-binding dehydrogenase 149 272 2.1E-27 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 PhaeoP54_02101 537845f5d14791220171277570f7eec5 323 SUPERFAMILY SSF50129 1 138 4.26E-36 T 14-10-2018 IPR011032 GroES-like superfamily PhaeoP54_02101 537845f5d14791220171277570f7eec5 323 Gene3D G3DSA:3.40.50.720 121 261 2.2E-93 T 14-10-2018 PhaeoP54_02101 537845f5d14791220171277570f7eec5 323 SMART SM00829 7 316 6.2E-39 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 PhaeoP54_02101 537845f5d14791220171277570f7eec5 323 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 85 1.1E-11 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 PhaeoP54_02101 537845f5d14791220171277570f7eec5 323 SUPERFAMILY SSF51735 110 283 2.53E-43 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PhaeoP54_00608 75408679c8da3cfa297ced314fc11be9 179 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 7 175 1.9E-68 T 14-10-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 PhaeoP54_00608 75408679c8da3cfa297ced314fc11be9 179 SUPERFAMILY SSF53271 6 176 9.28E-55 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like PhaeoP54_00608 75408679c8da3cfa297ced314fc11be9 179 Gene3D G3DSA:3.40.50.2020 2 179 9.7E-66 T 14-10-2018 PhaeoP54_00608 75408679c8da3cfa297ced314fc11be9 179 Pfam PF00156 Phosphoribosyl transferase domain 48 157 6.4E-18 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 PhaeoP54_00608 75408679c8da3cfa297ced314fc11be9 179 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 7 176 37.911 T 14-10-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 PhaeoP54_02861 116611173f47d295bdeffe4fa21b2d78 152 Pfam PF00011 Hsp20/alpha crystallin family 45 139 3.1E-19 T 14-10-2018 IPR002068 Alpha crystallin/Hsp20 domain PhaeoP54_02861 116611173f47d295bdeffe4fa21b2d78 152 Gene3D G3DSA:2.60.40.790 35 139 1.8E-23 T 14-10-2018 IPR008978 HSP20-like chaperone PhaeoP54_02861 116611173f47d295bdeffe4fa21b2d78 152 SUPERFAMILY SSF49764 31 138 1.29E-21 T 14-10-2018 IPR008978 HSP20-like chaperone PhaeoP54_00053 f3cd5119ca49cdbbaf78b46af97d46f2 201 Pfam PF00857 Isochorismatase family 4 197 2.8E-30 T 14-10-2018 IPR000868 Isochorismatase-like GO:0003824 PhaeoP54_00053 f3cd5119ca49cdbbaf78b46af97d46f2 201 SUPERFAMILY SSF52499 2 197 2.22E-46 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 PhaeoP54_00053 f3cd5119ca49cdbbaf78b46af97d46f2 201 Gene3D G3DSA:3.40.50.850 1 199 2.3E-67 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 PhaeoP54_00283 a0ca31f5507b5e674c458621dcb4f795 284 Pfam PF11412 Disulphide bond corrector protein DsbC 57 160 1.7E-18 T 14-10-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain PhaeoP54_03268 4510b3aa9599aebbe6fc408343340f04 195 Gene3D G3DSA:1.10.530.10 33 190 9.5E-18 T 14-10-2018 PhaeoP54_03268 4510b3aa9599aebbe6fc408343340f04 195 SUPERFAMILY SSF53955 24 184 4.22E-22 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily PhaeoP54_01178 32ff61c3a2f8e16924d26d2eb4adf555 440 SUPERFAMILY SSF110997 369 437 4.45E-9 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 PhaeoP54_01178 32ff61c3a2f8e16924d26d2eb4adf555 440 Pfam PF05036 Sporulation related domain 369 436 3.6E-7 T 14-10-2018 IPR007730 Sporulation-like domain GO:0042834 PhaeoP54_03193 6b7e5077134dc407d9c22f030ebdfef4 405 SUPERFAMILY SSF56801 47 363 5.23E-25 T 14-10-2018 PhaeoP54_03193 6b7e5077134dc407d9c22f030ebdfef4 405 Gene3D G3DSA:3.30.300.30 313 403 1.4E-8 T 14-10-2018 PhaeoP54_03193 6b7e5077134dc407d9c22f030ebdfef4 405 Gene3D G3DSA:3.40.50.12780 1 312 4.2E-62 T 14-10-2018 PhaeoP54_03193 6b7e5077134dc407d9c22f030ebdfef4 405 Pfam PF00501 AMP-binding enzyme 138 273 3.7E-5 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 PhaeoP54_00125 88a8b25063f37741722feff1132167b8 249 SUPERFAMILY SSF52540 12 239 2.82E-53 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_00125 88a8b25063f37741722feff1132167b8 249 SMART SM00382 39 210 2.3E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_00125 88a8b25063f37741722feff1132167b8 249 Gene3D G3DSA:3.40.50.300 10 245 7.9E-54 T 14-10-2018 PhaeoP54_00125 88a8b25063f37741722feff1132167b8 249 Pfam PF00005 ABC transporter 30 172 4.1E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PhaeoP54_00125 88a8b25063f37741722feff1132167b8 249 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PhaeoP54_02832 012a0be56c96ce6e8d3f64c0ad314ad3 202 Gene3D G3DSA:3.10.450.710 34 201 9.1E-23 T 14-10-2018 PhaeoP54_02832 012a0be56c96ce6e8d3f64c0ad314ad3 202 Pfam PF05494 MlaC protein 48 199 2.1E-30 T 14-10-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC PhaeoP54_00098 aa40512df5dc6ef542c00f0de7573987 306 Pfam PF02517 CAAX protease self-immunity 158 252 1.2E-14 T 14-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 PhaeoP54_03614 5553f11b025be47be2d9a9caf97627ba 94 Pfam PF06945 Protein of unknown function (DUF1289) 19 61 2.8E-10 T 14-10-2018 IPR010710 Protein of unknown function DUF1289 PhaeoP54_02024 7f887eac7bf352bb14ebfb76106e04f9 140 Gene3D G3DSA:1.20.1290.10 18 139 2.5E-28 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 PhaeoP54_02024 7f887eac7bf352bb14ebfb76106e04f9 140 Pfam PF02627 Carboxymuconolactone decarboxylase family 50 132 5.6E-18 T 14-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 PhaeoP54_02024 7f887eac7bf352bb14ebfb76106e04f9 140 SUPERFAMILY SSF69118 16 138 1.6E-30 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 PhaeoP54_02769 d7c65918dc1ef559237de1e18f5b53b0 351 SMART SM00797 25 303 9.9E-70 T 14-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B PhaeoP54_02769 d7c65918dc1ef559237de1e18f5b53b0 351 Pfam PF02626 Carboxyltransferase domain, subdomain A and B 27 286 1.5E-55 T 14-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B PhaeoP54_02769 d7c65918dc1ef559237de1e18f5b53b0 351 Gene3D G3DSA:2.40.100.10 174 310 3.8E-29 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily PhaeoP54_00435 d01bd1e5f071cb4e6a6c32571248fa4b 354 SUPERFAMILY SSF51412 2 343 1.08E-56 T 14-10-2018 PhaeoP54_00435 d01bd1e5f071cb4e6a6c32571248fa4b 354 Gene3D G3DSA:3.20.20.70 1 344 1.2E-104 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PhaeoP54_00435 d01bd1e5f071cb4e6a6c32571248fa4b 354 Pfam PF03060 Nitronate monooxygenase 4 341 8.0E-70 T 14-10-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 PhaeoP54_01312 b953e03a5b5633d57880e37ef337ca87 236 SUPERFAMILY SSF46785 1 62 2.08E-9 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_01312 b953e03a5b5633d57880e37ef337ca87 236 Pfam PF13280 WYL domain 139 228 2.2E-15 T 14-10-2018 IPR026881 WYL domain PhaeoP54_01312 b953e03a5b5633d57880e37ef337ca87 236 Pfam PF08279 HTH domain 6 59 5.0E-16 T 14-10-2018 IPR013196 Helix-turn-helix, type 11 PhaeoP54_01312 b953e03a5b5633d57880e37ef337ca87 236 Gene3D G3DSA:1.10.10.10 1 62 9.8E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_00924 8ec1c2166b0f82fc4af17e063e6f97c2 360 ProSitePatterns PS01347 MraY family signature 1. 68 80 - T 14-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 PhaeoP54_00924 8ec1c2166b0f82fc4af17e063e6f97c2 360 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 68 80 1.3E-5 T 14-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 PhaeoP54_00924 8ec1c2166b0f82fc4af17e063e6f97c2 360 Pfam PF00953 Glycosyl transferase family 4 99 284 4.3E-35 T 14-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 PhaeoP54_00924 8ec1c2166b0f82fc4af17e063e6f97c2 360 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 24 358 24.296 T 14-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 PhaeoP54_00924 8ec1c2166b0f82fc4af17e063e6f97c2 360 ProSitePatterns PS01348 MraY family signature 2. 189 200 - T 14-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 PhaeoP54_00924 8ec1c2166b0f82fc4af17e063e6f97c2 360 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 38 360 2.5E-124 T 14-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 PhaeoP54_03103 ce339f01ea8194e57414db8effb7c3da 155 Gene3D G3DSA:3.30.420.10 1 150 1.6E-57 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 PhaeoP54_03103 ce339f01ea8194e57414db8effb7c3da 155 SUPERFAMILY SSF53098 4 145 1.24E-55 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily PhaeoP54_03103 ce339f01ea8194e57414db8effb7c3da 155 Pfam PF00075 RNase H 4 145 1.1E-49 T 14-10-2018 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 PhaeoP54_03103 ce339f01ea8194e57414db8effb7c3da 155 Hamap MF_00042 Ribonuclease H [rnhA]. 1 154 34.924 T 14-10-2018 IPR022892 Ribonuclease HI GO:0004523 PhaeoP54_03204 06081b95946df91f6446af537da7e348 75 SUPERFAMILY SSF142921 13 73 3.27E-9 T 14-10-2018 IPR036930 WGR domain superfamily PhaeoP54_03204 06081b95946df91f6446af537da7e348 75 Pfam PF05406 WGR domain 15 74 3.0E-7 T 14-10-2018 IPR008893 WGR domain PhaeoP54_00577 2f4bb4dd84b52ca55a653b938ad538ae 168 Pfam PF01478 Type IV leader peptidase family 16 114 1.2E-7 T 14-10-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 PhaeoP54_02083 1e302048d57a4ad55118f84748af4a6e 191 Pfam PF13977 BetI-type transcriptional repressor, C-terminal 82 190 5.4E-25 T 14-10-2018 IPR039538 BetI-type transcriptional repressor, C-terminal PhaeoP54_02083 1e302048d57a4ad55118f84748af4a6e 191 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 35 58 1.6E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PhaeoP54_02083 1e302048d57a4ad55118f84748af4a6e 191 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 14 27 1.6E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PhaeoP54_02083 1e302048d57a4ad55118f84748af4a6e 191 SUPERFAMILY SSF48498 80 190 8.4E-27 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily PhaeoP54_02083 1e302048d57a4ad55118f84748af4a6e 191 Hamap MF_00768 HTH-type transcriptional regulator BetI [betI]. 1 191 70.383 T 14-10-2018 IPR017757 Transcriptional repressor BetI PhaeoP54_02083 1e302048d57a4ad55118f84748af4a6e 191 ProSitePatterns PS01081 TetR-type HTH domain signature. 26 57 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site PhaeoP54_02083 1e302048d57a4ad55118f84748af4a6e 191 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 59 1.1E-13 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PhaeoP54_02083 1e302048d57a4ad55118f84748af4a6e 191 Gene3D G3DSA:1.10.357.10 3 190 1.1E-40 T 14-10-2018 PhaeoP54_02083 1e302048d57a4ad55118f84748af4a6e 191 TIGRFAM TIGR03384 betaine_BetI: transcriptional repressor BetI 3 189 1.8E-70 T 14-10-2018 IPR017757 Transcriptional repressor BetI PhaeoP54_02083 1e302048d57a4ad55118f84748af4a6e 191 SUPERFAMILY SSF46689 2 86 3.64E-17 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PhaeoP54_01897 69d13c79c07a38df1f8a7509c9ddcc60 230 Gene3D G3DSA:3.30.2010.10 28 118 5.7E-8 T 14-10-2018 PhaeoP54_01897 69d13c79c07a38df1f8a7509c9ddcc60 230 Pfam PF01435 Peptidase family M48 36 221 1.7E-25 T 14-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 PhaeoP54_01382 18bed51de81c12bda33b122c0aaa3cd1 215 SUPERFAMILY SSF51294 23 164 9.03E-19 T 14-10-2018 IPR036844 Hint domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 PhaeoP54_01382 18bed51de81c12bda33b122c0aaa3cd1 215 Pfam PF13403 Hint domain 22 167 7.8E-52 T 14-10-2018 IPR028992 Hedgehog/Intein (Hint) domain PhaeoP54_01785 32aa5fb4a5268c2ec5e5cfee10add17b 247 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 2 235 26.916 T 14-10-2018 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 PhaeoP54_01785 32aa5fb4a5268c2ec5e5cfee10add17b 247 Pfam PF00977 Histidine biosynthesis protein 2 227 1.2E-51 T 14-10-2018 IPR006062 Histidine biosynthesis GO:0000105 PhaeoP54_01785 32aa5fb4a5268c2ec5e5cfee10add17b 247 SUPERFAMILY SSF51366 1 234 6.28E-53 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 PhaeoP54_01785 32aa5fb4a5268c2ec5e5cfee10add17b 247 Gene3D G3DSA:3.20.20.70 1 241 7.1E-63 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PhaeoP54_02596 c45c95e46f1ce0032651549229a7983e 193 PIRSF PIRSF033239 1 193 1.2E-38 T 14-10-2018 IPR010331 Exopolysaccharide synthesis, ExoD PhaeoP54_02596 c45c95e46f1ce0032651549229a7983e 193 Pfam PF06055 Exopolysaccharide synthesis, ExoD 10 185 5.2E-44 T 14-10-2018 IPR010331 Exopolysaccharide synthesis, ExoD PhaeoP54_02548 3f99c88c5733c4e402c70aafac3d20dd 356 Gene3D G3DSA:3.75.10.10 20 356 2.3E-94 T 14-10-2018 PhaeoP54_02548 3f99c88c5733c4e402c70aafac3d20dd 356 SUPERFAMILY SSF55909 24 355 2.68E-98 T 14-10-2018 PhaeoP54_02548 3f99c88c5733c4e402c70aafac3d20dd 356 Pfam PF04371 Porphyromonas-type peptidyl-arginine deiminase 32 354 8.8E-85 T 14-10-2018 IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type GO:0004668|GO:0009446 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 PhaeoP54_01142 518721dda8f0b2ce6ee901aeb4795604 145 Gene3D G3DSA:3.30.70.920 57 143 7.0E-15 T 14-10-2018 PhaeoP54_01142 518721dda8f0b2ce6ee901aeb4795604 145 SUPERFAMILY SSF54909 63 143 1.15E-14 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel PhaeoP54_01142 518721dda8f0b2ce6ee901aeb4795604 145 Pfam PF01037 Lrp/AsnC ligand binding domain 68 137 2.0E-12 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain PhaeoP54_01142 518721dda8f0b2ce6ee901aeb4795604 145 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 3 19 1.1E-13 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 PhaeoP54_01142 518721dda8f0b2ce6ee901aeb4795604 145 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 30 49 1.1E-13 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 PhaeoP54_01142 518721dda8f0b2ce6ee901aeb4795604 145 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 19 30 1.1E-13 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 PhaeoP54_01142 518721dda8f0b2ce6ee901aeb4795604 145 SMART SM00344 3 108 1.2E-26 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 PhaeoP54_01142 518721dda8f0b2ce6ee901aeb4795604 145 SUPERFAMILY SSF46785 3 57 6.58E-13 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_01142 518721dda8f0b2ce6ee901aeb4795604 145 Gene3D G3DSA:1.10.10.10 1 54 5.0E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_01142 518721dda8f0b2ce6ee901aeb4795604 145 Pfam PF13404 AsnC-type helix-turn-helix domain 4 44 1.0E-14 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 PhaeoP54_01553 dae85b28027b8f36696a2119bcc2afbb 250 Pfam PF00378 Enoyl-CoA hydratase/isomerase 13 232 2.4E-39 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 PhaeoP54_01553 dae85b28027b8f36696a2119bcc2afbb 250 Gene3D G3DSA:3.90.226.10 4 235 5.8E-54 T 14-10-2018 PhaeoP54_01553 dae85b28027b8f36696a2119bcc2afbb 250 SUPERFAMILY SSF52096 7 234 2.28E-50 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily PhaeoP54_01553 dae85b28027b8f36696a2119bcc2afbb 250 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 101 121 - T 14-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 PhaeoP54_02007 a11a3c71a608d07e8a0ac748c96657c5 259 Pfam PF12697 Alpha/beta hydrolase family 52 195 1.2E-8 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 PhaeoP54_02007 a11a3c71a608d07e8a0ac748c96657c5 259 SUPERFAMILY SSF53474 7 243 4.09E-39 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold PhaeoP54_02007 a11a3c71a608d07e8a0ac748c96657c5 259 Gene3D G3DSA:3.40.50.1820 3 251 2.2E-55 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold PhaeoP54_03529 17608b5e99d0931dd31f680fe5cfc77e 230 Pfam PF03963 Flagellar hook capping protein - N-terminal region 7 79 1.6E-19 T 14-10-2018 IPR005648 Flagellar hook capping protein PhaeoP54_03529 17608b5e99d0931dd31f680fe5cfc77e 230 Pfam PF13860 FlgD Ig-like domain 110 178 8.2E-12 T 14-10-2018 IPR025965 FlgD Ig-like domain PhaeoP54_03529 17608b5e99d0931dd31f680fe5cfc77e 230 Gene3D G3DSA:2.30.30.910 190 218 2.5E-10 T 14-10-2018 PhaeoP54_03529 17608b5e99d0931dd31f680fe5cfc77e 230 Gene3D G3DSA:2.60.40.4070 108 189 2.5E-10 T 14-10-2018 PhaeoP54_01638 f794ac7755ce770dd70a5d0359c9d018 327 Pfam PF02653 Branched-chain amino acid transport system / permease component 30 308 2.0E-36 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 PhaeoP54_03282 cb8a3adb49ced9ab739aaac52188e73e 205 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 89 109 - T 14-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 PhaeoP54_03282 cb8a3adb49ced9ab739aaac52188e73e 205 Pfam PF00378 Enoyl-CoA hydratase/isomerase 8 191 4.2E-35 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 PhaeoP54_03282 cb8a3adb49ced9ab739aaac52188e73e 205 SUPERFAMILY SSF52096 2 190 2.19E-46 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily PhaeoP54_03282 cb8a3adb49ced9ab739aaac52188e73e 205 Gene3D G3DSA:3.90.226.10 4 205 1.8E-47 T 14-10-2018 PhaeoP54_03890 1af9e1833b49c330d4875b9be39fa0d3 330 Pfam PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) 28 261 2.6E-46 T 14-10-2018 IPR019108 Cytochrome c oxidase caa3-type, assembly factor CtaG-related PhaeoP54_00106 d5f147f996c3f66872d4bef834ecb8ce 150 Pfam PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 16 145 3.6E-43 T 14-10-2018 IPR003791 Protein of unknown function UPF0178 PhaeoP54_00106 d5f147f996c3f66872d4bef834ecb8ce 150 Hamap MF_00489 UPF0178 protein YaiI [yaiI]. 1 147 29.173 T 14-10-2018 IPR003791 Protein of unknown function UPF0178 PhaeoP54_00650 5785229a4c77add7e17596f26b428aa9 326 Gene3D G3DSA:1.10.3720.10 84 312 8.9E-22 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_00650 5785229a4c77add7e17596f26b428aa9 326 SUPERFAMILY SSF161098 89 303 1.85E-17 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_00650 5785229a4c77add7e17596f26b428aa9 326 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 319 7.7E-37 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PhaeoP54_03876 5169c5954cbb3ce69d8f66391f5b2bdb 108 SUPERFAMILY SSF103481 8 104 1.14E-8 T 14-10-2018 PhaeoP54_03876 5169c5954cbb3ce69d8f66391f5b2bdb 108 Pfam PF02694 Uncharacterised BCR, YnfA/UPF0060 family 2 107 7.5E-28 T 14-10-2018 IPR003844 Uncharacterised protein family UPF0060 GO:0016020 PhaeoP54_03876 5169c5954cbb3ce69d8f66391f5b2bdb 108 Hamap MF_00010 UPF0060 membrane protein YnfA [ynfA]. 1 106 23.658 T 14-10-2018 IPR003844 Uncharacterised protein family UPF0060 GO:0016020 PhaeoP54_01887 a70c503239542a4a5a6c768bbd71ba9a 239 Pfam PF13763 Domain of unknown function (DUF4167) 9 82 4.0E-31 T 14-10-2018 IPR025430 Domain of unknown function DUF4167 PhaeoP54_00446 bb20cabbd060e6d3f2b331ffa58b54c1 335 Gene3D G3DSA:3.40.50.300 123 329 2.7E-70 T 14-10-2018 PhaeoP54_00446 bb20cabbd060e6d3f2b331ffa58b54c1 335 SUPERFAMILY SSF52540 109 294 7.81E-35 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_00446 bb20cabbd060e6d3f2b331ffa58b54c1 335 Pfam PF02562 PhoH-like protein 126 329 4.3E-88 T 14-10-2018 IPR003714 PhoH-like protein GO:0005524 PhaeoP54_00569 33727afb55fe26a82180ae8d664b3d34 192 Gene3D G3DSA:2.40.33.20 9 188 2.4E-57 T 14-10-2018 PhaeoP54_00569 33727afb55fe26a82180ae8d664b3d34 192 SUPERFAMILY SSF50800 8 185 7.85E-37 T 14-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily PhaeoP54_03490 f565c15edcae0da00aea8ff2a90b483c 507 SUPERFAMILY SSF48452 135 371 3.11E-12 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 PhaeoP54_03490 f565c15edcae0da00aea8ff2a90b483c 507 Pfam PF14559 Tetratricopeptide repeat 325 381 9.1E-8 T 14-10-2018 PhaeoP54_03490 f565c15edcae0da00aea8ff2a90b483c 507 PIRSF PIRSF031802 5 496 9.7E-167 T 14-10-2018 IPR016982 Uncharacterised conserved protein UCP031802 PhaeoP54_03490 f565c15edcae0da00aea8ff2a90b483c 507 Pfam PF07219 HemY protein N-terminus 30 143 1.7E-27 T 14-10-2018 IPR010817 HemY, N-terminal PhaeoP54_03490 f565c15edcae0da00aea8ff2a90b483c 507 Gene3D G3DSA:1.25.40.10 66 243 1.4E-6 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 PhaeoP54_02932 651bb02be177e52090357be2c52b9c3a 68 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 55 13.138 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PhaeoP54_02932 651bb02be177e52090357be2c52b9c3a 68 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 13 40 7.0E-9 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PhaeoP54_02932 651bb02be177e52090357be2c52b9c3a 68 Pfam PF01165 Ribosomal protein S21 2 55 3.5E-20 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PhaeoP54_02932 651bb02be177e52090357be2c52b9c3a 68 ProSitePatterns PS01181 Ribosomal protein S21 signature. 11 23 - T 14-10-2018 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 PhaeoP54_02932 651bb02be177e52090357be2c52b9c3a 68 Gene3D G3DSA:1.20.5.1150 14 52 1.1E-8 T 14-10-2018 IPR038380 Ribosomal protein S21 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PhaeoP54_02932 651bb02be177e52090357be2c52b9c3a 68 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 1 56 8.6E-19 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PhaeoP54_03020 d21163fccfb33365b62799b00db33fe7 103 SUPERFAMILY SSF50104 4 100 7.83E-29 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily PhaeoP54_03020 d21163fccfb33365b62799b00db33fe7 103 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 3 101 3.7E-30 T 14-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PhaeoP54_03020 d21163fccfb33365b62799b00db33fe7 103 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 3 95 17.682 T 14-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PhaeoP54_03020 d21163fccfb33365b62799b00db33fe7 103 Gene3D G3DSA:2.30.30.30 2 102 2.9E-31 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 PhaeoP54_03020 d21163fccfb33365b62799b00db33fe7 103 Pfam PF00467 KOW motif 7 37 1.1E-6 T 14-10-2018 IPR005824 KOW PhaeoP54_03020 d21163fccfb33365b62799b00db33fe7 103 SMART SM00739 4 31 9.0E-7 T 14-10-2018 IPR005824 KOW PhaeoP54_03020 d21163fccfb33365b62799b00db33fe7 103 ProSitePatterns PS01108 Ribosomal protein L24 signature. 8 25 - T 14-10-2018 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 PhaeoP54_03020 d21163fccfb33365b62799b00db33fe7 103 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 40 101 2.6E-16 T 14-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PhaeoP54_01130 4435c49e16772835a12639a4c164cb59 452 Gene3D G3DSA:3.10.20.70 8 116 1.8E-5 T 14-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PhaeoP54_01130 4435c49e16772835a12639a4c164cb59 452 Gene3D G3DSA:3.30.590.10 118 450 1.7E-94 T 14-10-2018 PhaeoP54_01130 4435c49e16772835a12639a4c164cb59 452 Pfam PF00120 Glutamine synthetase, catalytic domain 117 447 2.7E-99 T 14-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PhaeoP54_01130 4435c49e16772835a12639a4c164cb59 452 SUPERFAMILY SSF55931 115 449 4.41E-103 T 14-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 PhaeoP54_01130 4435c49e16772835a12639a4c164cb59 452 SUPERFAMILY SSF54368 10 114 1.57E-21 T 14-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PhaeoP54_01130 4435c49e16772835a12639a4c164cb59 452 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 251 266 - T 14-10-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 PhaeoP54_01130 4435c49e16772835a12639a4c164cb59 452 SMART SM01230 115 371 2.1E-106 T 14-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PhaeoP54_00153 5c3f35a9759a60a3f8fce85ac043a3c6 196 Gene3D G3DSA:3.40.630.30 11 167 7.8E-10 T 14-10-2018 PhaeoP54_00153 5c3f35a9759a60a3f8fce85ac043a3c6 196 SUPERFAMILY SSF55729 17 167 3.09E-15 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase PhaeoP54_00153 5c3f35a9759a60a3f8fce85ac043a3c6 196 Pfam PF00583 Acetyltransferase (GNAT) family 37 152 1.7E-6 T 14-10-2018 IPR000182 GNAT domain PhaeoP54_01151 d8a2dc7c18e382dc23343c0bb6daba94 261 Pfam PF00459 Inositol monophosphatase family 9 258 7.0E-58 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 PhaeoP54_01151 d8a2dc7c18e382dc23343c0bb6daba94 261 PRINTS PR01959 SuhB family inositol monophosphatase signature 200 212 4.2E-28 T 14-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 PhaeoP54_01151 d8a2dc7c18e382dc23343c0bb6daba94 261 PRINTS PR01959 SuhB family inositol monophosphatase signature 19 41 4.2E-28 T 14-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 PhaeoP54_01151 d8a2dc7c18e382dc23343c0bb6daba94 261 PRINTS PR01959 SuhB family inositol monophosphatase signature 158 184 4.2E-28 T 14-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 PhaeoP54_01151 d8a2dc7c18e382dc23343c0bb6daba94 261 PRINTS PR01959 SuhB family inositol monophosphatase signature 106 125 4.2E-28 T 14-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 PhaeoP54_01151 d8a2dc7c18e382dc23343c0bb6daba94 261 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 83 96 - T 14-10-2018 IPR020583 Inositol monophosphatase, metal-binding site PhaeoP54_01151 d8a2dc7c18e382dc23343c0bb6daba94 261 PRINTS PR00377 Inositol monophosphatase superfamily signature 210 234 1.1E-52 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 PhaeoP54_01151 d8a2dc7c18e382dc23343c0bb6daba94 261 PRINTS PR00377 Inositol monophosphatase superfamily signature 62 78 1.1E-52 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 PhaeoP54_01151 d8a2dc7c18e382dc23343c0bb6daba94 261 PRINTS PR00377 Inositol monophosphatase superfamily signature 132 155 1.1E-52 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 PhaeoP54_01151 d8a2dc7c18e382dc23343c0bb6daba94 261 PRINTS PR00377 Inositol monophosphatase superfamily signature 179 200 1.1E-52 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 PhaeoP54_01151 d8a2dc7c18e382dc23343c0bb6daba94 261 PRINTS PR00377 Inositol monophosphatase superfamily signature 40 60 1.1E-52 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 PhaeoP54_01151 d8a2dc7c18e382dc23343c0bb6daba94 261 PRINTS PR00377 Inositol monophosphatase superfamily signature 83 99 1.1E-52 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 PhaeoP54_01151 d8a2dc7c18e382dc23343c0bb6daba94 261 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 213 227 - T 14-10-2018 IPR020550 Inositol monophosphatase, conserved site GO:0046854 PhaeoP54_01151 d8a2dc7c18e382dc23343c0bb6daba94 261 Gene3D G3DSA:3.30.540.10 2 142 5.2E-52 T 14-10-2018 PhaeoP54_01151 d8a2dc7c18e382dc23343c0bb6daba94 261 Gene3D G3DSA:3.40.190.80 143 261 6.9E-32 T 14-10-2018 PhaeoP54_01151 d8a2dc7c18e382dc23343c0bb6daba94 261 SUPERFAMILY SSF56655 7 260 9.56E-81 T 14-10-2018 PhaeoP54_01046 b8e2b8524fdc46d549d528e7f3485458 280 Pfam PF05673 Protein of unknown function (DUF815) 29 274 1.7E-103 T 14-10-2018 IPR008533 Domain of unknown function DUF815 PhaeoP54_01046 b8e2b8524fdc46d549d528e7f3485458 280 SMART SM00382 77 202 0.0021 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_01046 b8e2b8524fdc46d549d528e7f3485458 280 SUPERFAMILY SSF52540 39 188 1.97E-22 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_01046 b8e2b8524fdc46d549d528e7f3485458 280 Gene3D G3DSA:3.40.50.300 48 189 1.8E-10 T 14-10-2018 PhaeoP54_03142 320cfc9f118f8aad1be8c47136d4fab6 167 SUPERFAMILY SSF50346 95 166 2.51E-19 T 14-10-2018 IPR011033 PRC-barrel-like superfamily PhaeoP54_03142 320cfc9f118f8aad1be8c47136d4fab6 167 Pfam PF01782 RimM N-terminal domain 7 85 7.5E-18 T 14-10-2018 IPR002676 RimM, N-terminal GO:0006364 PhaeoP54_03142 320cfc9f118f8aad1be8c47136d4fab6 167 Gene3D G3DSA:2.30.30.240 90 167 2.4E-16 T 14-10-2018 PhaeoP54_03142 320cfc9f118f8aad1be8c47136d4fab6 167 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 5 166 1.4E-43 T 14-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 PhaeoP54_03142 320cfc9f118f8aad1be8c47136d4fab6 167 Gene3D G3DSA:2.40.30.60 3 88 4.6E-18 T 14-10-2018 IPR036976 RimM, N-terminal domain superfamily GO:0006364 PhaeoP54_03142 320cfc9f118f8aad1be8c47136d4fab6 167 SUPERFAMILY SSF50447 4 88 3.14E-19 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily PhaeoP54_03142 320cfc9f118f8aad1be8c47136d4fab6 167 Pfam PF05239 PRC-barrel domain 93 166 3.1E-12 T 14-10-2018 IPR027275 PRC-barrel domain PhaeoP54_03142 320cfc9f118f8aad1be8c47136d4fab6 167 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 4 166 23.772 T 14-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 PhaeoP54_03265 28e4005c617e1bc0e887708f202a0b6b 392 Gene3D G3DSA:3.90.1150.10 15 380 3.9E-113 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 PhaeoP54_03265 28e4005c617e1bc0e887708f202a0b6b 392 Pfam PF00155 Aminotransferase class I and II 30 384 2.6E-38 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 PhaeoP54_03265 28e4005c617e1bc0e887708f202a0b6b 392 Gene3D G3DSA:3.40.640.10 43 289 3.9E-113 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PhaeoP54_03265 28e4005c617e1bc0e887708f202a0b6b 392 SUPERFAMILY SSF53383 1 390 6.75E-81 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PhaeoP54_01139 98d5dcc996f05a87ce1e06b14652f41b 183 Gene3D G3DSA:1.10.3680.10 3 136 1.0E-13 T 14-10-2018 IPR029024 TerB-like PhaeoP54_01139 98d5dcc996f05a87ce1e06b14652f41b 183 Pfam PF05099 Tellurite resistance protein TerB 3 140 1.1E-23 T 14-10-2018 IPR007791 Co-chaperone DjlA, N-terminal PhaeoP54_01139 98d5dcc996f05a87ce1e06b14652f41b 183 SUPERFAMILY SSF158682 7 141 1.83E-20 T 14-10-2018 IPR029024 TerB-like PhaeoP54_04039 5c5a9bf39cdba3a4651ad0714726dc2c 347 Gene3D G3DSA:3.90.550.10 13 263 1.6E-24 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PhaeoP54_04039 5c5a9bf39cdba3a4651ad0714726dc2c 347 SUPERFAMILY SSF53448 27 303 8.06E-34 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PhaeoP54_04039 5c5a9bf39cdba3a4651ad0714726dc2c 347 Pfam PF13641 Glycosyltransferase like family 2 26 259 4.4E-23 T 14-10-2018 PhaeoP54_01496 3898722aaf568113c490df3624182961 248 Gene3D G3DSA:3.40.1280.10 6 169 3.9E-54 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal PhaeoP54_01496 3898722aaf568113c490df3624182961 248 PIRSF PIRSF004808 4 248 3.1E-77 T 14-10-2018 IPR004384 RNA methyltransferase TrmJ/LasT GO:0006396|GO:0008173 PhaeoP54_01496 3898722aaf568113c490df3624182961 248 SUPERFAMILY SSF75217 7 169 3.47E-33 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases PhaeoP54_01496 3898722aaf568113c490df3624182961 248 Pfam PF00588 SpoU rRNA Methylase family 10 159 1.5E-28 T 14-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 PhaeoP54_01496 3898722aaf568113c490df3624182961 248 Gene3D G3DSA:1.10.8.590 173 248 8.5E-9 T 14-10-2018 PhaeoP54_01496 3898722aaf568113c490df3624182961 248 TIGRFAM TIGR00050 rRNA_methyl_1: RNA methyltransferase, TrmH family, group 1 10 241 9.0E-53 T 14-10-2018 IPR004384 RNA methyltransferase TrmJ/LasT GO:0006396|GO:0008173 PhaeoP54_02146 3cb0f9d9ba9ed3df09b857ac1fe6a0f7 114 Pfam PF07087 Protein of unknown function (DUF1353) 34 108 1.5E-10 T 14-10-2018 IPR010767 Campylobacter phage CGC-2007, Cje0229 PhaeoP54_03249 cb115f86e85f63b36c7622be1d630da9 342 Pfam PF12833 Helix-turn-helix domain 251 326 2.8E-20 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PhaeoP54_03249 cb115f86e85f63b36c7622be1d630da9 342 Gene3D G3DSA:1.10.10.60 224 331 1.3E-27 T 14-10-2018 PhaeoP54_03249 cb115f86e85f63b36c7622be1d630da9 342 SUPERFAMILY SSF46689 280 329 6.85E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PhaeoP54_03249 cb115f86e85f63b36c7622be1d630da9 342 Gene3D G3DSA:3.40.50.880 20 213 6.1E-23 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like PhaeoP54_03249 cb115f86e85f63b36c7622be1d630da9 342 SUPERFAMILY SSF46689 230 278 2.87E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PhaeoP54_03249 cb115f86e85f63b36c7622be1d630da9 342 SUPERFAMILY SSF52317 23 208 1.65E-16 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like PhaeoP54_03249 cb115f86e85f63b36c7622be1d630da9 342 SMART SM00342 244 325 1.0E-22 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PhaeoP54_01973 d648d2df7d9b4ee67bd6fe2e3766b997 119 SUPERFAMILY SSF89360 9 101 1.57E-30 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 PhaeoP54_01973 d648d2df7d9b4ee67bd6fe2e3766b997 119 Pfam PF01521 Iron-sulphur cluster biosynthesis 10 109 2.0E-24 T 14-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 PhaeoP54_01973 d648d2df7d9b4ee67bd6fe2e3766b997 119 Gene3D G3DSA:2.60.300.12 9 113 2.3E-35 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 PhaeoP54_01973 d648d2df7d9b4ee67bd6fe2e3766b997 119 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 10 112 1.9E-34 T 14-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 PhaeoP54_03596 d7de94e60ed3c04ab551dd27a018a115 438 Pfam PF00535 Glycosyl transferase family 2 9 128 5.8E-26 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 PhaeoP54_03596 d7de94e60ed3c04ab551dd27a018a115 438 SUPERFAMILY SSF53448 6 228 3.47E-46 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PhaeoP54_03596 d7de94e60ed3c04ab551dd27a018a115 438 Gene3D G3DSA:3.90.550.10 2 262 1.5E-44 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PhaeoP54_03279 973b089104df1f5e9508d7743ea70518 196 Gene3D G3DSA:1.20.1050.10 76 185 1.3E-35 T 14-10-2018 PhaeoP54_03279 973b089104df1f5e9508d7743ea70518 196 SUPERFAMILY SSF47616 77 191 5.57E-17 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily PhaeoP54_03279 973b089104df1f5e9508d7743ea70518 196 Gene3D G3DSA:3.40.30.10 10 192 1.3E-35 T 14-10-2018 PhaeoP54_03279 973b089104df1f5e9508d7743ea70518 196 Pfam PF00043 Glutathione S-transferase, C-terminal domain 108 171 2.3E-4 T 14-10-2018 IPR004046 Glutathione S-transferase, C-terminal PhaeoP54_03279 973b089104df1f5e9508d7743ea70518 196 SUPERFAMILY SSF52833 2 73 1.44E-17 T 14-10-2018 IPR036249 Thioredoxin-like superfamily PhaeoP54_03279 973b089104df1f5e9508d7743ea70518 196 Pfam PF13417 Glutathione S-transferase, N-terminal domain 14 72 4.0E-14 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 PhaeoP54_03439 8c1f2a9829acfaf24913350f5102969a 358 Gene3D G3DSA:1.10.10.10 1 93 2.8E-30 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_03439 8c1f2a9829acfaf24913350f5102969a 358 Pfam PF01628 HrcA protein C terminal domain 119 339 9.8E-51 T 14-10-2018 IPR021153 Heat-inducible transcription repressor HrcA, C-terminal GO:0003677|GO:0006355 PhaeoP54_03439 8c1f2a9829acfaf24913350f5102969a 358 Gene3D G3DSA:3.30.450.40 120 349 1.2E-33 T 14-10-2018 IPR029016 GAF-like domain superfamily PhaeoP54_03439 8c1f2a9829acfaf24913350f5102969a 358 Pfam PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding 14 77 1.2E-4 T 14-10-2018 IPR005104 Winged helix-turn-helix transcription repressor, HrcA DNA-binding domain GO:0003677|GO:0006355 PhaeoP54_03439 8c1f2a9829acfaf24913350f5102969a 358 Gene3D G3DSA:3.30.390.60 141 243 1.2E-33 T 14-10-2018 IPR023120 Winged helix-turn-helix transcription repressor, HrcA, inserted dimerising domain superfamily PhaeoP54_03439 8c1f2a9829acfaf24913350f5102969a 358 SUPERFAMILY SSF46785 11 92 1.14E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_03439 8c1f2a9829acfaf24913350f5102969a 358 SUPERFAMILY SSF55781 81 356 1.2E-54 T 14-10-2018 PhaeoP54_03439 8c1f2a9829acfaf24913350f5102969a 358 PIRSF PIRSF005485 8 358 1.5E-107 T 14-10-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 PhaeoP54_03439 8c1f2a9829acfaf24913350f5102969a 358 Hamap MF_00081 Heat-inducible transcription repressor HrcA [hrcA]. 10 347 27.796 T 14-10-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 PhaeoP54_03439 8c1f2a9829acfaf24913350f5102969a 358 TIGRFAM TIGR00331 hrcA: heat-inducible transcription repressor HrcA 13 353 2.2E-89 T 14-10-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 PhaeoP54_02132 89ff603cc151bd647add2b8c7a76a582 631 SUPERFAMILY SSF56801 22 573 6.54E-125 T 14-10-2018 PhaeoP54_02132 89ff603cc151bd647add2b8c7a76a582 631 Gene3D G3DSA:3.40.50.12780 20 469 8.9E-91 T 14-10-2018 PhaeoP54_02132 89ff603cc151bd647add2b8c7a76a582 631 Pfam PF00501 AMP-binding enzyme 33 476 2.8E-82 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 PhaeoP54_02132 89ff603cc151bd647add2b8c7a76a582 631 Pfam PF13193 AMP-binding enzyme C-terminal domain 485 561 3.4E-15 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain PhaeoP54_02132 89ff603cc151bd647add2b8c7a76a582 631 Gene3D G3DSA:3.30.300.30 470 574 1.6E-26 T 14-10-2018 PhaeoP54_02132 89ff603cc151bd647add2b8c7a76a582 631 ProSitePatterns PS00455 Putative AMP-binding domain signature. 223 234 - T 14-10-2018 IPR020845 AMP-binding, conserved site PhaeoP54_03051 6ea155da0617b144a0475f42c3ea15e4 189 Gene3D G3DSA:1.20.120.520 35 188 7.1E-14 T 14-10-2018 PhaeoP54_03051 6ea155da0617b144a0475f42c3ea15e4 189 Pfam PF01814 Hemerythrin HHE cation binding domain 46 184 1.0E-11 T 14-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 PhaeoP54_01941 b596d31c4b7e8d0d09c52a3eb26190df 382 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 225 238 - T 14-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 PhaeoP54_01941 b596d31c4b7e8d0d09c52a3eb26190df 382 Gene3D G3DSA:3.40.640.10 1 381 4.6E-144 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PhaeoP54_01941 b596d31c4b7e8d0d09c52a3eb26190df 382 SUPERFAMILY SSF53383 4 377 1.9E-92 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PhaeoP54_01941 b596d31c4b7e8d0d09c52a3eb26190df 382 Pfam PF00155 Aminotransferase class I and II 30 373 3.7E-50 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 PhaeoP54_01634 f8709ba18d06f1bbfe17a7a6588c3cb3 516 Gene3D G3DSA:3.20.20.480 39 513 1.9E-142 T 14-10-2018 IPR038601 MttB-like superfamily KEGG: 00680+2.1.1.250|MetaCyc: PWY-5250 PhaeoP54_01634 f8709ba18d06f1bbfe17a7a6588c3cb3 516 PIRSF PIRSF037567 1 514 4.9E-131 T 14-10-2018 IPR010426 Trimethylamine methyltransferase GO:0008168|GO:0015948 KEGG: 00680+2.1.1.250|MetaCyc: PWY-5250 PhaeoP54_01634 f8709ba18d06f1bbfe17a7a6588c3cb3 516 Pfam PF06253 Trimethylamine methyltransferase (MTTB) 12 508 1.6E-140 T 14-10-2018 IPR010426 Trimethylamine methyltransferase GO:0008168|GO:0015948 KEGG: 00680+2.1.1.250|MetaCyc: PWY-5250 PhaeoP54_01307 906a443b09689a53a98d77df00d7dc56 198 Pfam PF00551 Formyl transferase 4 184 1.5E-52 T 14-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 PhaeoP54_01307 906a443b09689a53a98d77df00d7dc56 198 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 5 190 28.202 T 14-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 PhaeoP54_01307 906a443b09689a53a98d77df00d7dc56 198 Gene3D G3DSA:3.40.50.170 2 195 3.3E-67 T 14-10-2018 PhaeoP54_01307 906a443b09689a53a98d77df00d7dc56 198 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 4 189 2.2E-60 T 14-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 PhaeoP54_01307 906a443b09689a53a98d77df00d7dc56 198 SUPERFAMILY SSF53328 4 194 2.75E-55 T 14-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 PhaeoP54_01307 906a443b09689a53a98d77df00d7dc56 198 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 136 159 - T 14-10-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 PhaeoP54_02487 d0089e1223418cd5c09f531637d9cb52 338 SUPERFAMILY SSF81345 11 330 1.7E-60 T 14-10-2018 IPR037294 ABC transporter, BtuC-like PhaeoP54_02487 d0089e1223418cd5c09f531637d9cb52 338 Pfam PF01032 FecCD transport family 29 330 3.3E-68 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 PhaeoP54_02487 d0089e1223418cd5c09f531637d9cb52 338 Gene3D G3DSA:1.10.3470.10 15 335 4.8E-73 T 14-10-2018 IPR037294 ABC transporter, BtuC-like PhaeoP54_03129 e2ad97474a83cedc22b5180241a1f45b 302 SUPERFAMILY SSF103481 189 293 2.48E-6 T 14-10-2018 PhaeoP54_03129 e2ad97474a83cedc22b5180241a1f45b 302 SUPERFAMILY SSF103481 40 142 7.32E-10 T 14-10-2018 PhaeoP54_03129 e2ad97474a83cedc22b5180241a1f45b 302 Pfam PF00892 EamA-like transporter family 154 289 3.3E-10 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 PhaeoP54_03129 e2ad97474a83cedc22b5180241a1f45b 302 Pfam PF00892 EamA-like transporter family 7 138 1.0E-12 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 PhaeoP54_02377 67984cb49cb361944f217f8672526c8a 550 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 14-10-2018 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 PhaeoP54_02377 67984cb49cb361944f217f8672526c8a 550 Gene3D G3DSA:3.30.260.10 136 410 1.8E-235 T 14-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily PhaeoP54_02377 67984cb49cb361944f217f8672526c8a 550 PRINTS PR00298 60kDa chaperonin signature 398 419 2.1E-73 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 PhaeoP54_02377 67984cb49cb361944f217f8672526c8a 550 PRINTS PR00298 60kDa chaperonin signature 83 110 2.1E-73 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 PhaeoP54_02377 67984cb49cb361944f217f8672526c8a 550 PRINTS PR00298 60kDa chaperonin signature 268 291 2.1E-73 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 PhaeoP54_02377 67984cb49cb361944f217f8672526c8a 550 PRINTS PR00298 60kDa chaperonin signature 350 375 2.1E-73 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 PhaeoP54_02377 67984cb49cb361944f217f8672526c8a 550 PRINTS PR00298 60kDa chaperonin signature 27 53 2.1E-73 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 PhaeoP54_02377 67984cb49cb361944f217f8672526c8a 550 Gene3D G3DSA:3.50.7.10 192 372 1.8E-235 T 14-10-2018 IPR027409 GroEL-like apical domain superfamily PhaeoP54_02377 67984cb49cb361944f217f8672526c8a 550 SUPERFAMILY SSF52029 184 376 3.44E-85 T 14-10-2018 IPR027409 GroEL-like apical domain superfamily PhaeoP54_02377 67984cb49cb361944f217f8672526c8a 550 Hamap MF_00600 60 kDa chaperonin [groL]. 2 549 42.013 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 PhaeoP54_02377 67984cb49cb361944f217f8672526c8a 550 Gene3D G3DSA:1.10.560.10 8 522 1.8E-235 T 14-10-2018 IPR027413 GroEL-like equatorial domain superfamily PhaeoP54_02377 67984cb49cb361944f217f8672526c8a 550 SUPERFAMILY SSF48592 7 522 3.89E-76 T 14-10-2018 IPR027413 GroEL-like equatorial domain superfamily PhaeoP54_02377 67984cb49cb361944f217f8672526c8a 550 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 527 1.2E-256 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 PhaeoP54_02377 67984cb49cb361944f217f8672526c8a 550 SUPERFAMILY SSF54849 137 196 4.12E-22 T 14-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily PhaeoP54_02377 67984cb49cb361944f217f8672526c8a 550 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 526 1.7E-97 T 14-10-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 PhaeoP54_01348 3be389bd10018427fc156d6acd489c24 308 SUPERFAMILY SSF53901 29 307 3.84E-26 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 PhaeoP54_01348 3be389bd10018427fc156d6acd489c24 308 Gene3D G3DSA:3.40.47.10 5 166 7.5E-6 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 PhaeoP54_01348 3be389bd10018427fc156d6acd489c24 308 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 218 306 4.2E-15 T 14-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 PhaeoP54_01348 3be389bd10018427fc156d6acd489c24 308 Gene3D G3DSA:3.40.47.10 167 307 8.1E-25 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 PhaeoP54_01997 3cd9a32fd71abc9e08f1e3e1696a3209 161 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 7 68 2.1E-6 T 14-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 PhaeoP54_01997 3cd9a32fd71abc9e08f1e3e1696a3209 161 Pfam PF01799 [2Fe-2S] binding domain 74 147 2.0E-31 T 14-10-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 PhaeoP54_01997 3cd9a32fd71abc9e08f1e3e1696a3209 161 Gene3D G3DSA:3.10.20.30 1 77 6.2E-27 T 14-10-2018 IPR012675 Beta-grasp domain superfamily PhaeoP54_01997 3cd9a32fd71abc9e08f1e3e1696a3209 161 SUPERFAMILY SSF47741 86 152 3.27E-34 T 14-10-2018 IPR036884 [2Fe-2S]-binding domain superfamily PhaeoP54_01997 3cd9a32fd71abc9e08f1e3e1696a3209 161 SUPERFAMILY SSF54292 2 78 6.03E-23 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 PhaeoP54_01997 3cd9a32fd71abc9e08f1e3e1696a3209 161 Gene3D G3DSA:1.10.150.120 78 157 2.0E-34 T 14-10-2018 PhaeoP54_00208 47e8771d18ba06859a8473a7c3762c9e 369 PIRSF PIRSF035875 70 360 3.5E-57 T 14-10-2018 IPR017039 Virulence factor BrkB PhaeoP54_00208 47e8771d18ba06859a8473a7c3762c9e 369 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 79 334 4.2E-24 T 14-10-2018 IPR017039 Virulence factor BrkB PhaeoP54_00208 47e8771d18ba06859a8473a7c3762c9e 369 Pfam PF03631 Virulence factor BrkB 88 338 8.5E-52 T 14-10-2018 IPR017039 Virulence factor BrkB PhaeoP54_00757 1810c0bde77df6385bfc298df7c35a5b 471 SMART SM00388 241 310 0.0018 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PhaeoP54_00757 1810c0bde77df6385bfc298df7c35a5b 471 PRINTS PR00344 Bacterial sensor protein C-terminal signature 388 402 1.3E-5 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PhaeoP54_00757 1810c0bde77df6385bfc298df7c35a5b 471 PRINTS PR00344 Bacterial sensor protein C-terminal signature 421 439 1.3E-5 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PhaeoP54_00757 1810c0bde77df6385bfc298df7c35a5b 471 Pfam PF00512 His Kinase A (phospho-acceptor) domain 243 299 3.3E-7 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PhaeoP54_00757 1810c0bde77df6385bfc298df7c35a5b 471 Gene3D G3DSA:1.10.287.130 193 303 3.7E-11 T 14-10-2018 PhaeoP54_00757 1810c0bde77df6385bfc298df7c35a5b 471 Pfam PF08521 Two-component sensor kinase N-terminal 25 164 9.6E-31 T 14-10-2018 IPR013727 Two-component sensor kinase, N-terminal PhaeoP54_00757 1810c0bde77df6385bfc298df7c35a5b 471 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 351 469 9.4E-17 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PhaeoP54_00757 1810c0bde77df6385bfc298df7c35a5b 471 SMART SM00387 351 471 5.1E-22 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PhaeoP54_00757 1810c0bde77df6385bfc298df7c35a5b 471 Gene3D G3DSA:3.30.565.10 304 470 2.6E-28 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PhaeoP54_00757 1810c0bde77df6385bfc298df7c35a5b 471 SUPERFAMILY SSF47384 224 301 3.34E-9 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 PhaeoP54_00757 1810c0bde77df6385bfc298df7c35a5b 471 SUPERFAMILY SSF55874 296 470 4.32E-30 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PhaeoP54_03803 0fe8beadc99629712edd3bc54986a2ac 395 SUPERFAMILY SSF53383 22 385 3.9E-94 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PhaeoP54_03803 0fe8beadc99629712edd3bc54986a2ac 395 Gene3D G3DSA:3.90.1150.10 27 383 1.2E-97 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 PhaeoP54_03803 0fe8beadc99629712edd3bc54986a2ac 395 Gene3D G3DSA:3.40.640.10 64 285 1.2E-97 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PhaeoP54_03803 0fe8beadc99629712edd3bc54986a2ac 395 Pfam PF00155 Aminotransferase class I and II 33 383 4.2E-61 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 PhaeoP54_00306 f538ce5c5fbaa4f32ef4525f3a390190 406 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 285 297 - T 14-10-2018 IPR033749 Polyprenyl synthetase, conserved site PhaeoP54_00306 f538ce5c5fbaa4f32ef4525f3a390190 406 Pfam PF00348 Polyprenyl synthetase 114 358 1.8E-70 T 14-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 PhaeoP54_00306 f538ce5c5fbaa4f32ef4525f3a390190 406 Gene3D G3DSA:1.10.600.10 75 406 2.5E-121 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily PhaeoP54_00306 f538ce5c5fbaa4f32ef4525f3a390190 406 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 163 177 - T 14-10-2018 IPR033749 Polyprenyl synthetase, conserved site PhaeoP54_00306 f538ce5c5fbaa4f32ef4525f3a390190 406 SUPERFAMILY SSF48576 89 404 2.45E-96 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily PhaeoP54_03077 f432883fe7e968b4351c03cfca460ae5 135 Pfam PF03610 PTS system fructose IIA component 3 113 2.6E-20 T 14-10-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 PhaeoP54_03077 f432883fe7e968b4351c03cfca460ae5 135 SUPERFAMILY SSF53062 2 127 3.14E-33 T 14-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 PhaeoP54_03077 f432883fe7e968b4351c03cfca460ae5 135 Gene3D G3DSA:3.40.50.510 1 135 9.9E-33 T 14-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 PhaeoP54_00856 722f355e3d9621f732e3fdd9a30fdd30 155 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 154 82.841 T 14-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 PhaeoP54_00856 722f355e3d9621f732e3fdd9a30fdd30 155 Pfam PF03477 ATP cone domain 50 135 9.2E-17 T 14-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 PhaeoP54_00856 722f355e3d9621f732e3fdd9a30fdd30 155 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 146 5.0E-49 T 14-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 PhaeoP54_03685 c573034dd59b20441e99e1d4846617e0 200 SUPERFAMILY SSF53850 25 173 4.78E-5 T 14-10-2018 PhaeoP54_03864 bac413c5009142c4ef74c2179c95c773 791 Pfam PF03135 CagE, TrbE, VirB family, component of type IV transporter system 190 383 1.0E-23 T 14-10-2018 IPR018145 CagE, TrbE, VirB component of type IV transporter system, central domain GO:0005524 PhaeoP54_03864 bac413c5009142c4ef74c2179c95c773 791 Gene3D G3DSA:3.40.50.300 428 506 8.2E-6 T 14-10-2018 PhaeoP54_03864 bac413c5009142c4ef74c2179c95c773 791 Gene3D G3DSA:3.40.50.300 593 765 2.8E-18 T 14-10-2018 PhaeoP54_03864 bac413c5009142c4ef74c2179c95c773 791 SMART SM00382 442 713 6.9E-5 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_03864 bac413c5009142c4ef74c2179c95c773 791 Pfam PF10412 Type IV secretion-system coupling protein DNA-binding domain 443 482 1.2E-4 T 14-10-2018 IPR019476 Type IV secretion system coupling protein TraD, DNA-binding domain PhaeoP54_03864 bac413c5009142c4ef74c2179c95c773 791 SUPERFAMILY SSF52540 406 729 8.11E-41 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_03999 d2a8a148745fd0d7cc2772d0d67a3ee9 359 Pfam PF04610 TrbL/VirB6 plasmid conjugal transfer protein 38 254 2.9E-33 T 14-10-2018 IPR007688 Plasmid conjugal transfer TrbL/VirB6 GO:0030255 PhaeoP54_02427 d2ad0fb0a47adc2780e5fe7a95cb33c5 96 Gene3D G3DSA:2.60.120.10 2 96 8.4E-22 T 14-10-2018 IPR014710 RmlC-like jelly roll fold PhaeoP54_02427 d2ad0fb0a47adc2780e5fe7a95cb33c5 96 Pfam PF09313 Domain of unknown function (DUF1971) 14 85 2.3E-19 T 14-10-2018 IPR015392 Domain of unknown function DUF1971 PhaeoP54_02427 d2ad0fb0a47adc2780e5fe7a95cb33c5 96 SUPERFAMILY SSF51197 6 90 2.61E-21 T 14-10-2018 PhaeoP54_02095 5f4b218bed335980237611e478707595 187 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 30 179 5.8E-26 T 14-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase PhaeoP54_02095 5f4b218bed335980237611e478707595 187 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 8 179 1.9E-36 T 14-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase PhaeoP54_02095 5f4b218bed335980237611e478707595 187 Gene3D G3DSA:3.40.50.10420 5 187 1.4E-39 T 14-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily PhaeoP54_02095 5f4b218bed335980237611e478707595 187 SUPERFAMILY SSF100950 8 186 3.07E-41 T 14-10-2018 IPR037171 NagB/RpiA transferase-like PhaeoP54_03836 a5abe10de1cb964ac6087f978c509831 128 Gene3D G3DSA:1.20.58.2000 6 82 1.6E-20 T 14-10-2018 PhaeoP54_03836 a5abe10de1cb964ac6087f978c509831 128 Pfam PF11431 Membrane transport protein MerF 28 68 6.3E-11 T 14-10-2018 IPR021091 Mercury ion transport, MerF PhaeoP54_03901 4e51d16aa2c77d2b369f33a52bbd9b8c 432 Gene3D G3DSA:1.10.10.10 157 254 2.6E-12 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_03901 4e51d16aa2c77d2b369f33a52bbd9b8c 432 SUPERFAMILY SSF46785 143 246 1.18E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_03901 4e51d16aa2c77d2b369f33a52bbd9b8c 432 Pfam PF01051 Initiator Replication protein 24 241 4.4E-33 T 14-10-2018 IPR000525 Initiator Rep protein GO:0003887|GO:0005727|GO:0006270 PhaeoP54_00808 ba7fcb858380ecbc561e01e379799513 363 SUPERFAMILY SSF52317 14 200 9.16E-35 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like PhaeoP54_00808 ba7fcb858380ecbc561e01e379799513 363 SUPERFAMILY SSF46689 271 320 2.82E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PhaeoP54_00808 ba7fcb858380ecbc561e01e379799513 363 Pfam PF12833 Helix-turn-helix domain 241 319 7.1E-22 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PhaeoP54_00808 ba7fcb858380ecbc561e01e379799513 363 Gene3D G3DSA:3.40.50.880 11 207 7.7E-47 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like PhaeoP54_00808 ba7fcb858380ecbc561e01e379799513 363 SUPERFAMILY SSF46689 220 269 7.77E-5 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PhaeoP54_00808 ba7fcb858380ecbc561e01e379799513 363 Pfam PF01965 DJ-1/PfpI family 47 181 6.3E-7 T 14-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 PhaeoP54_00808 ba7fcb858380ecbc561e01e379799513 363 SMART SM00342 235 318 1.2E-23 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PhaeoP54_00808 ba7fcb858380ecbc561e01e379799513 363 Gene3D G3DSA:1.10.10.60 214 323 3.3E-26 T 14-10-2018 PhaeoP54_00808 ba7fcb858380ecbc561e01e379799513 363 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 272 314 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 PhaeoP54_03715 0159b3240f0a05c4a361ac9ba3721a77 72 Pfam PF01527 Transposase 4 63 5.3E-9 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 PhaeoP54_03715 0159b3240f0a05c4a361ac9ba3721a77 72 SUPERFAMILY SSF48295 3 64 1.46E-13 T 14-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 PhaeoP54_02442 1bf7f70c75736bbad162c5b62ea6a610 313 SUPERFAMILY SSF161098 98 294 1.03E-18 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_02442 1bf7f70c75736bbad162c5b62ea6a610 313 Gene3D G3DSA:1.10.3720.10 94 306 3.0E-18 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_02442 1bf7f70c75736bbad162c5b62ea6a610 313 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 120 303 5.3E-32 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PhaeoP54_00747 fc2d349fc86da1d6ea014e66988eb98a 394 Gene3D G3DSA:3.90.230.10 159 390 4.1E-35 T 14-10-2018 PhaeoP54_00747 fc2d349fc86da1d6ea014e66988eb98a 394 Gene3D G3DSA:3.40.350.10 1 158 1.6E-35 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal PhaeoP54_00747 fc2d349fc86da1d6ea014e66988eb98a 394 SUPERFAMILY SSF53092 1 158 2.96E-43 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal PhaeoP54_00747 fc2d349fc86da1d6ea014e66988eb98a 394 SUPERFAMILY SSF55920 160 391 1.57E-49 T 14-10-2018 IPR036005 Creatinase/aminopeptidase-like PhaeoP54_00747 fc2d349fc86da1d6ea014e66988eb98a 394 Pfam PF00557 Metallopeptidase family M24 169 375 1.4E-26 T 14-10-2018 IPR000994 Peptidase M24 PhaeoP54_00747 fc2d349fc86da1d6ea014e66988eb98a 394 Pfam PF01321 Creatinase/Prolidase N-terminal domain 16 160 3.6E-22 T 14-10-2018 IPR000587 Creatinase, N-terminal GO:0016787 PhaeoP54_00736 a15867faaa6f582bbaa66dad95e849fb 168 Gene3D G3DSA:3.40.50.970 1 158 1.3E-5 T 14-10-2018 PhaeoP54_00736 a15867faaa6f582bbaa66dad95e849fb 168 TIGRFAM TIGR03845 sulfopyru_alph: sulfopyruvate decarboxylase, alpha subunit 5 162 2.6E-44 T 14-10-2018 IPR022502 Sulfopyruvate decarboxylase, alpha subunit GO:0030976|GO:0050545 KEGG: 00680+4.1.1.79|MetaCyc: PWY-6637|MetaCyc: PWY-6643 PhaeoP54_00736 a15867faaa6f582bbaa66dad95e849fb 168 SUPERFAMILY SSF52518 1 161 1.4E-13 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold PhaeoP54_00736 a15867faaa6f582bbaa66dad95e849fb 168 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 3 99 3.0E-6 T 14-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 PhaeoP54_03642 8603413daa74d8ad2b60320d672e6d17 444 TIGRFAM TIGR00797 matE: MATE efflux family protein 21 414 4.0E-50 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 PhaeoP54_03642 8603413daa74d8ad2b60320d672e6d17 444 PIRSF PIRSF006603 2 440 8.8E-93 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 PhaeoP54_03642 8603413daa74d8ad2b60320d672e6d17 444 Pfam PF01554 MatE 246 407 2.3E-23 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 PhaeoP54_03642 8603413daa74d8ad2b60320d672e6d17 444 Pfam PF01554 MatE 21 182 2.1E-22 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 PhaeoP54_00069 bbec890f90e3aeb4ce78fb2608d5a7c8 345 SUPERFAMILY SSF56266 2 335 3.92E-68 T 14-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 PhaeoP54_00069 bbec890f90e3aeb4ce78fb2608d5a7c8 345 Pfam PF03576 Peptidase family S58 7 331 8.8E-61 T 14-10-2018 IPR005321 Peptidase S58, DmpA PhaeoP54_00069 bbec890f90e3aeb4ce78fb2608d5a7c8 345 Gene3D G3DSA:3.60.70.12 1 344 1.1E-102 T 14-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 PhaeoP54_01481 dd8fbaae6cd26dcb07643e62e61e550c 535 Pfam PF13193 AMP-binding enzyme C-terminal domain 444 517 3.7E-12 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain PhaeoP54_01481 dd8fbaae6cd26dcb07643e62e61e550c 535 Pfam PF00501 AMP-binding enzyme 55 434 5.4E-73 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 PhaeoP54_01481 dd8fbaae6cd26dcb07643e62e61e550c 535 Gene3D G3DSA:3.30.300.30 435 531 1.4E-23 T 14-10-2018 PhaeoP54_01481 dd8fbaae6cd26dcb07643e62e61e550c 535 SUPERFAMILY SSF56801 45 529 1.7E-116 T 14-10-2018 PhaeoP54_01481 dd8fbaae6cd26dcb07643e62e61e550c 535 Gene3D G3DSA:3.40.50.12780 18 432 4.3E-86 T 14-10-2018 PhaeoP54_01517 d6761e1d53eb4d7eb77ddcb5effdff73 111 Pfam PF00893 Small Multidrug Resistance protein 4 95 5.4E-27 T 14-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 PhaeoP54_01517 d6761e1d53eb4d7eb77ddcb5effdff73 111 Gene3D G3DSA:1.10.3730.20 3 111 6.5E-37 T 14-10-2018 PhaeoP54_01517 d6761e1d53eb4d7eb77ddcb5effdff73 111 SUPERFAMILY SSF103481 6 106 3.4E-21 T 14-10-2018 PhaeoP54_02840 f1161d9f022bb024abb662ea7247447e 158 ProSitePatterns PS01317 SsrA-binding protein. 31 43 - T 14-10-2018 IPR020081 SsrA-binding protein, conserved site PhaeoP54_02840 f1161d9f022bb024abb662ea7247447e 158 Gene3D G3DSA:2.40.280.10 5 133 5.4E-46 T 14-10-2018 IPR023620 Small protein B PhaeoP54_02840 f1161d9f022bb024abb662ea7247447e 158 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 13 137 1.0E-55 T 14-10-2018 IPR000037 SsrA-binding protein GO:0003723 PhaeoP54_02840 f1161d9f022bb024abb662ea7247447e 158 Hamap MF_00023 SsrA-binding protein [smpB]. 1 158 66.845 T 14-10-2018 IPR000037 SsrA-binding protein GO:0003723 PhaeoP54_02840 f1161d9f022bb024abb662ea7247447e 158 SUPERFAMILY SSF74982 6 137 3.79E-49 T 14-10-2018 IPR023620 Small protein B PhaeoP54_02840 f1161d9f022bb024abb662ea7247447e 158 TIGRFAM TIGR00086 smpB: SsrA-binding protein 12 155 1.1E-53 T 14-10-2018 IPR000037 SsrA-binding protein GO:0003723 PhaeoP54_02840 f1161d9f022bb024abb662ea7247447e 158 Pfam PF01668 SmpB protein 13 155 3.2E-57 T 14-10-2018 IPR000037 SsrA-binding protein GO:0003723 PhaeoP54_03851 681927b0711a5030e8afddf1af840ccd 170 Pfam PF14464 Prokaryotic homologs of the JAB domain 12 126 1.9E-13 T 14-10-2018 IPR028090 JAB domain, prokaryotic PhaeoP54_03851 681927b0711a5030e8afddf1af840ccd 170 Gene3D G3DSA:3.40.140.10 5 152 8.9E-14 T 14-10-2018 PhaeoP54_03851 681927b0711a5030e8afddf1af840ccd 170 SUPERFAMILY SSF102712 5 109 4.18E-11 T 14-10-2018 PhaeoP54_00195 53943ea776a32d657ddb507101aa0450 70 Pfam PF13333 Integrase core domain 14 67 4.2E-9 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 PhaeoP54_00195 53943ea776a32d657ddb507101aa0450 70 SUPERFAMILY SSF53098 1 65 3.22E-8 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily PhaeoP54_02588 2bbe5f62c2000ad38e42ed529ec37169 326 Pfam PF01497 Periplasmic binding protein 55 294 4.7E-25 T 14-10-2018 IPR002491 ABC transporter periplasmic binding domain PhaeoP54_02588 2bbe5f62c2000ad38e42ed529ec37169 326 SUPERFAMILY SSF53807 43 316 2.67E-47 T 14-10-2018 PhaeoP54_02588 2bbe5f62c2000ad38e42ed529ec37169 326 Gene3D G3DSA:3.40.50.1980 25 145 8.0E-22 T 14-10-2018 PhaeoP54_02588 2bbe5f62c2000ad38e42ed529ec37169 326 Gene3D G3DSA:3.40.50.1980 148 321 4.9E-62 T 14-10-2018 PhaeoP54_00233 19ae89416faa8d36e5711c18acdcce8e 645 Pfam PF00501 AMP-binding enzyme 67 516 3.3E-96 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 PhaeoP54_00233 19ae89416faa8d36e5711c18acdcce8e 645 Gene3D G3DSA:3.40.50.12780 46 360 1.0E-53 T 14-10-2018 PhaeoP54_00233 19ae89416faa8d36e5711c18acdcce8e 645 ProSitePatterns PS00455 Putative AMP-binding domain signature. 231 242 - T 14-10-2018 IPR020845 AMP-binding, conserved site PhaeoP54_00233 19ae89416faa8d36e5711c18acdcce8e 645 Gene3D G3DSA:3.40.50.12780 368 512 9.8E-38 T 14-10-2018 PhaeoP54_00233 19ae89416faa8d36e5711c18acdcce8e 645 SUPERFAMILY SSF56801 41 645 8.5E-119 T 14-10-2018 PhaeoP54_03825 a0d40f75d459e784dba1aca19da3de17 91 Gene3D G3DSA:3.30.2310.20 3 91 1.1E-30 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily PhaeoP54_03825 a0d40f75d459e784dba1aca19da3de17 91 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 4 90 6.5E-17 T 14-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family PhaeoP54_03825 a0d40f75d459e784dba1aca19da3de17 91 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 4 90 1.3E-10 T 14-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family PhaeoP54_01824 7cb7f8e755f6820c8f09ab8b4bbb2357 214 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 47 64 1.3E-65 T 14-10-2018 PhaeoP54_01824 7cb7f8e755f6820c8f09ab8b4bbb2357 214 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 187 210 1.3E-65 T 14-10-2018 PhaeoP54_01824 7cb7f8e755f6820c8f09ab8b4bbb2357 214 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 21 42 1.3E-65 T 14-10-2018 PhaeoP54_01824 7cb7f8e755f6820c8f09ab8b4bbb2357 214 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 70 93 1.3E-65 T 14-10-2018 PhaeoP54_01824 7cb7f8e755f6820c8f09ab8b4bbb2357 214 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 95 113 1.3E-65 T 14-10-2018 PhaeoP54_01824 7cb7f8e755f6820c8f09ab8b4bbb2357 214 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 150 169 1.3E-65 T 14-10-2018 PhaeoP54_01824 7cb7f8e755f6820c8f09ab8b4bbb2357 214 Pfam PF03379 CcmB protein 1 211 5.3E-83 T 14-10-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 PhaeoP54_01824 7cb7f8e755f6820c8f09ab8b4bbb2357 214 PIRSF PIRSF002764 1 214 3.1E-74 T 14-10-2018 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria PhaeoP54_01824 7cb7f8e755f6820c8f09ab8b4bbb2357 214 TIGRFAM TIGR01190 ccmB: heme exporter protein CcmB 1 210 3.8E-84 T 14-10-2018 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria PhaeoP54_01589 a451893644d6c1b3023d2e683199e6b8 310 SUPERFAMILY SSF51730 28 294 2.94E-41 T 14-10-2018 IPR029041 FAD-linked oxidoreductase-like PhaeoP54_01589 a451893644d6c1b3023d2e683199e6b8 310 Gene3D G3DSA:3.20.20.220 24 296 4.8E-20 T 14-10-2018 PhaeoP54_00581 35c89878cc66beeb0cacae180f77ae52 322 Gene3D G3DSA:1.20.81.30 142 258 1.5E-7 T 14-10-2018 PhaeoP54_00581 35c89878cc66beeb0cacae180f77ae52 322 Pfam PF00482 Type II secretion system (T2SS), protein F 155 278 3.9E-15 T 14-10-2018 IPR018076 Type II secretion system F domain PhaeoP54_00538 2a9038625e64231517c4fce65a4adcee 184 Pfam PF13508 Acetyltransferase (GNAT) domain 58 127 1.3E-10 T 14-10-2018 IPR000182 GNAT domain PhaeoP54_00538 2a9038625e64231517c4fce65a4adcee 184 SUPERFAMILY SSF55729 7 147 3.19E-21 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase PhaeoP54_00538 2a9038625e64231517c4fce65a4adcee 184 Gene3D G3DSA:3.40.630.30 8 145 2.8E-22 T 14-10-2018 PhaeoP54_01180 8b3767bc44d8f8b337245ad614fb3fb1 542 Gene3D G3DSA:3.40.50.12780 8 441 3.7E-99 T 14-10-2018 PhaeoP54_01180 8b3767bc44d8f8b337245ad614fb3fb1 542 Pfam PF13193 AMP-binding enzyme C-terminal domain 455 529 3.4E-19 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain PhaeoP54_01180 8b3767bc44d8f8b337245ad614fb3fb1 542 Pfam PF00501 AMP-binding enzyme 27 446 1.9E-87 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 PhaeoP54_01180 8b3767bc44d8f8b337245ad614fb3fb1 542 Gene3D G3DSA:3.30.300.310 442 542 6.4E-33 T 14-10-2018 PhaeoP54_01180 8b3767bc44d8f8b337245ad614fb3fb1 542 SUPERFAMILY SSF56801 14 540 1.06E-133 T 14-10-2018 PhaeoP54_01180 8b3767bc44d8f8b337245ad614fb3fb1 542 ProSitePatterns PS00455 Putative AMP-binding domain signature. 189 200 - T 14-10-2018 IPR020845 AMP-binding, conserved site PhaeoP54_03497 121603d83ba499a0fc284c91aa82189f 335 Pfam PF00700 Bacterial flagellin C-terminal helical region 260 334 2.0E-12 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 PhaeoP54_03497 121603d83ba499a0fc284c91aa82189f 335 SUPERFAMILY SSF64518 23 334 1.23E-11 T 14-10-2018 PhaeoP54_00613 32e40275782e5c5407547585902fd0d8 169 Gene3D G3DSA:3.40.630.30 2 162 5.5E-32 T 14-10-2018 PhaeoP54_00613 32e40275782e5c5407547585902fd0d8 169 SUPERFAMILY SSF55729 3 134 7.32E-25 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase PhaeoP54_00613 32e40275782e5c5407547585902fd0d8 169 Pfam PF13527 Acetyltransferase (GNAT) domain 8 127 3.3E-10 T 14-10-2018 PhaeoP54_00188 2aaf404b7f9716258131810cadfaa4c1 183 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 41 171 3.1E-24 T 14-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ PhaeoP54_01109 5b6e52588553e90397f81fb57c1f1762 251 Pfam PF00106 short chain dehydrogenase 7 202 1.1E-46 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_01109 5b6e52588553e90397f81fb57c1f1762 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 76 87 6.2E-28 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_01109 5b6e52588553e90397f81fb57c1f1762 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 6.2E-28 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_01109 5b6e52588553e90397f81fb57c1f1762 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 6.2E-28 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_01109 5b6e52588553e90397f81fb57c1f1762 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 133 149 6.2E-28 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_01109 5b6e52588553e90397f81fb57c1f1762 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 6.2E-28 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_01109 5b6e52588553e90397f81fb57c1f1762 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 6.2E-28 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_01109 5b6e52588553e90397f81fb57c1f1762 251 Gene3D G3DSA:3.40.50.720 1 251 7.9E-74 T 14-10-2018 PhaeoP54_01109 5b6e52588553e90397f81fb57c1f1762 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 159 178 4.4E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_01109 5b6e52588553e90397f81fb57c1f1762 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 76 87 4.4E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_01109 5b6e52588553e90397f81fb57c1f1762 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 139 147 4.4E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_01109 5b6e52588553e90397f81fb57c1f1762 251 SUPERFAMILY SSF51735 3 248 4.63E-61 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PhaeoP54_01109 5b6e52588553e90397f81fb57c1f1762 251 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 146 174 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 PhaeoP54_02942 a1e6ef9e8b93c99fae009cb73901c90f 333 Gene3D G3DSA:3.40.50.300 128 332 2.0E-73 T 14-10-2018 PhaeoP54_02942 a1e6ef9e8b93c99fae009cb73901c90f 333 Gene3D G3DSA:3.40.50.720 49 126 7.4E-21 T 14-10-2018 PhaeoP54_02942 a1e6ef9e8b93c99fae009cb73901c90f 333 PIRSF PIRSF026760 2 333 2.3E-92 T 14-10-2018 IPR011669 Uncharacterised conserved protein UCP026760 PhaeoP54_02942 a1e6ef9e8b93c99fae009cb73901c90f 333 Pfam PF17396 Domain of unknown function (DUF1611_N) Rossmann-like domain 39 124 1.3E-23 T 14-10-2018 IPR035402 Domain of unknown function DUF1611-N, Rossmann-like domain PhaeoP54_02942 a1e6ef9e8b93c99fae009cb73901c90f 333 Pfam PF07755 Domain of unknown function (DUF1611_C) P-loop domain 130 327 1.5E-75 T 14-10-2018 IPR035086 Domain of unknown function DUF1611, P-loop PhaeoP54_02942 a1e6ef9e8b93c99fae009cb73901c90f 333 SUPERFAMILY SSF52540 2 330 1.65E-109 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_02348 bfdc95daaeedd88694c4d2a6970f9052 374 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 150 217 7.1E-20 T 14-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 PhaeoP54_02348 bfdc95daaeedd88694c4d2a6970f9052 374 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 282 371 7.3E-22 T 14-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 PhaeoP54_02348 bfdc95daaeedd88694c4d2a6970f9052 374 Gene3D G3DSA:3.40.47.10 3 215 8.9E-58 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 PhaeoP54_02348 bfdc95daaeedd88694c4d2a6970f9052 374 Gene3D G3DSA:3.40.47.10 218 373 3.7E-40 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 PhaeoP54_02348 bfdc95daaeedd88694c4d2a6970f9052 374 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 147 163 - T 14-10-2018 IPR018201 Beta-ketoacyl synthase, active site PhaeoP54_02348 bfdc95daaeedd88694c4d2a6970f9052 374 SUPERFAMILY SSF53901 5 373 2.14E-49 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 PhaeoP54_03356 7fa321fb1e566a5d4f788715dd048414 261 Gene3D G3DSA:1.10.12.10 203 261 2.3E-15 T 14-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal PhaeoP54_03356 7fa321fb1e566a5d4f788715dd048414 261 SUPERFAMILY SSF52096 2 261 2.37E-77 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily PhaeoP54_03356 7fa321fb1e566a5d4f788715dd048414 261 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 99 119 - T 14-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 PhaeoP54_03356 7fa321fb1e566a5d4f788715dd048414 261 Gene3D G3DSA:3.90.226.10 2 198 8.8E-61 T 14-10-2018 PhaeoP54_03356 7fa321fb1e566a5d4f788715dd048414 261 Pfam PF00378 Enoyl-CoA hydratase/isomerase 13 260 1.9E-65 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 PhaeoP54_01428 dd1e92c8b5a54ba864aaa270f91b4bb6 284 TIGRFAM TIGR00417 speE: spermidine synthase 6 278 8.2E-100 T 14-10-2018 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 PhaeoP54_01428 dd1e92c8b5a54ba864aaa270f91b4bb6 284 Pfam PF01564 Spermine/spermidine synthase domain 61 239 1.7E-58 T 14-10-2018 PhaeoP54_01428 dd1e92c8b5a54ba864aaa270f91b4bb6 284 Hamap MF_00198 Polyamine aminopropyltransferase [speE]. 5 284 38.459 T 14-10-2018 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 PhaeoP54_01428 dd1e92c8b5a54ba864aaa270f91b4bb6 284 Gene3D G3DSA:3.40.50.150 55 283 3.0E-77 T 14-10-2018 PhaeoP54_01428 dd1e92c8b5a54ba864aaa270f91b4bb6 284 Pfam PF17284 Spermidine synthase tetramerisation domain 6 57 3.7E-15 T 14-10-2018 IPR035246 Spermidine synthase, tetramerisation domain KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 PhaeoP54_01428 dd1e92c8b5a54ba864aaa270f91b4bb6 284 Gene3D G3DSA:2.30.140.10 1 54 8.7E-16 T 14-10-2018 IPR037163 Spermidine synthase, tetramerisation domain superfamily KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 PhaeoP54_01428 dd1e92c8b5a54ba864aaa270f91b4bb6 284 SUPERFAMILY SSF53335 5 282 1.56E-86 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PhaeoP54_01428 dd1e92c8b5a54ba864aaa270f91b4bb6 284 ProSitePatterns PS01330 Polyamine biosynthesis (PABS) domain signature. 81 94 - T 14-10-2018 IPR030373 Polyamine biosynthesis domain, conserved site KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 PhaeoP54_03922 39eb835e3a321d3ab1374a20130fd680 611 Pfam PF06276 Ferric iron reductase FhuF-like transporter 419 580 1.0E-33 T 14-10-2018 IPR022770 Ferric iron reductase FhuF domain PhaeoP54_03922 39eb835e3a321d3ab1374a20130fd680 611 Gene3D G3DSA:1.10.510.40 382 586 4.3E-13 T 14-10-2018 PhaeoP54_03922 39eb835e3a321d3ab1374a20130fd680 611 Pfam PF04183 IucA / IucC family 160 388 2.2E-53 T 14-10-2018 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal GO:0019290 PhaeoP54_01859 937f2bbb5471e718ed23314f3c39b304 242 Gene3D G3DSA:1.10.10.10 150 231 6.6E-14 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_01859 937f2bbb5471e718ed23314f3c39b304 242 SMART SM00419 173 221 0.0084 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 PhaeoP54_01859 937f2bbb5471e718ed23314f3c39b304 242 SUPERFAMILY SSF46785 150 228 3.91E-13 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_01859 937f2bbb5471e718ed23314f3c39b304 242 SUPERFAMILY SSF51206 8 147 2.36E-22 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like PhaeoP54_01859 937f2bbb5471e718ed23314f3c39b304 242 Pfam PF00027 Cyclic nucleotide-binding domain 36 121 2.5E-12 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain PhaeoP54_01859 937f2bbb5471e718ed23314f3c39b304 242 Gene3D G3DSA:2.60.120.10 32 149 7.9E-23 T 14-10-2018 IPR014710 RmlC-like jelly roll fold PhaeoP54_01859 937f2bbb5471e718ed23314f3c39b304 242 Pfam PF13545 Crp-like helix-turn-helix domain 153 227 3.9E-10 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 PhaeoP54_01480 47f85eeca7be4a63d9e0fe4c9c1992ed 223 Gene3D G3DSA:3.40.30.10 1 208 2.4E-69 T 14-10-2018 PhaeoP54_01480 47f85eeca7be4a63d9e0fe4c9c1992ed 223 Pfam PF01323 DSBA-like thioredoxin domain 6 205 3.9E-38 T 14-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 PhaeoP54_01480 47f85eeca7be4a63d9e0fe4c9c1992ed 223 SUPERFAMILY SSF52833 4 210 2.55E-51 T 14-10-2018 IPR036249 Thioredoxin-like superfamily PhaeoP54_00478 c7737325f558c0836557229741ea1763 136 Pfam PF05523 WxcM-like, C-terminal 5 132 1.3E-56 T 14-10-2018 IPR008894 WxcM-like, C-terminal KEGG: 00523+5.3.2.3|MetaCyc: PWY-6953|MetaCyc: PWY-7688 PhaeoP54_00478 c7737325f558c0836557229741ea1763 136 SUPERFAMILY SSF51182 5 131 1.24E-44 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily PhaeoP54_00478 c7737325f558c0836557229741ea1763 136 Gene3D G3DSA:2.60.120.10 3 135 4.0E-51 T 14-10-2018 IPR014710 RmlC-like jelly roll fold PhaeoP54_03717 0052c6c02f9cf11df4684bbd85f962f3 322 Gene3D G3DSA:3.40.190.10 24 288 1.4E-69 T 14-10-2018 PhaeoP54_03717 0052c6c02f9cf11df4684bbd85f962f3 322 Gene3D G3DSA:3.40.190.10 125 301 1.4E-69 T 14-10-2018 PhaeoP54_03717 0052c6c02f9cf11df4684bbd85f962f3 322 SUPERFAMILY SSF53850 19 310 4.78E-66 T 14-10-2018 PhaeoP54_03717 0052c6c02f9cf11df4684bbd85f962f3 322 Pfam PF13343 Bacterial extracellular solute-binding protein 71 281 3.6E-29 T 14-10-2018 PhaeoP54_03717 0052c6c02f9cf11df4684bbd85f962f3 322 PIRSF PIRSF002825 3 318 4.9E-55 T 14-10-2018 IPR026045 Ferric binding protein PhaeoP54_03656 f313d825794e47c7e966c9fbf3741b1a 282 SUPERFAMILY SSF52096 107 218 2.78E-20 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily PhaeoP54_03656 f313d825794e47c7e966c9fbf3741b1a 282 Pfam PF00574 Clp protease 120 215 5.2E-5 T 14-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA PhaeoP54_03656 f313d825794e47c7e966c9fbf3741b1a 282 Gene3D G3DSA:3.90.226.10 115 257 6.8E-18 T 14-10-2018 PhaeoP54_03755 aaf483aee61fe6b3eb7596c03dba841c 342 Gene3D G3DSA:3.30.60.50 189 236 2.8E-92 T 14-10-2018 PhaeoP54_03755 aaf483aee61fe6b3eb7596c03dba841c 342 Gene3D G3DSA:1.10.1530.10 21 337 2.8E-92 T 14-10-2018 PhaeoP54_03755 aaf483aee61fe6b3eb7596c03dba841c 342 SUPERFAMILY SSF89733 13 341 1.02E-92 T 14-10-2018 IPR036111 Malate/L-sulfolactate/L-lactate dehydrogenase-like superfamily GO:0016491|GO:0055114 PhaeoP54_03755 aaf483aee61fe6b3eb7596c03dba841c 342 Pfam PF02615 Malate/L-lactate dehydrogenase 16 338 3.0E-92 T 14-10-2018 IPR003767 Malate/L-lactate dehydrogenase-like GO:0016491|GO:0055114 PhaeoP54_03755 aaf483aee61fe6b3eb7596c03dba841c 342 Gene3D G3DSA:3.30.1370.60 72 311 2.8E-92 T 14-10-2018 PhaeoP54_00566 4dc617ff1f598b04ace6f096c3ba6d9f 280 Pfam PF13174 Tetratricopeptide repeat 233 262 0.01 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 PhaeoP54_00566 4dc617ff1f598b04ace6f096c3ba6d9f 280 Hamap MF_02066 Cell division coordinator CpoB [cpoB]. 5 277 15.935 T 14-10-2018 IPR034706 Cell division coordinator CpoB GO:0051301 PhaeoP54_00566 4dc617ff1f598b04ace6f096c3ba6d9f 280 SUPERFAMILY SSF48452 161 267 8.65E-9 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 PhaeoP54_00566 4dc617ff1f598b04ace6f096c3ba6d9f 280 TIGRFAM TIGR02795 tol_pal_ybgF: tol-pal system protein YbgF 157 272 6.5E-28 T 14-10-2018 IPR014162 Cell division coordinator CpoB, C-terminal PhaeoP54_00566 4dc617ff1f598b04ace6f096c3ba6d9f 280 Gene3D G3DSA:1.25.40.10 157 278 4.3E-18 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 PhaeoP54_03674 cc06d4d2ceaf370bfd86ccd0f29d1f32 485 Pfam PF00939 Sodium:sulfate symporter transmembrane region 38 484 2.1E-24 T 14-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 PhaeoP54_02424 c3a9afe460df74d27e1aa222b2f4eb75 55 Pfam PF05545 Cbb3-type cytochrome oxidase component FixQ 1 47 1.8E-17 T 14-10-2018 IPR008621 Cbb3-type cytochrome oxidase component PhaeoP54_00968 afaac46bd2ca121e8e76cedb50e78f2f 132 Gene3D G3DSA:3.90.1150.30 1 118 1.6E-14 T 14-10-2018 IPR038056 YjbR-like superfamily PhaeoP54_00968 afaac46bd2ca121e8e76cedb50e78f2f 132 Pfam PF04237 YjbR 12 102 4.1E-13 T 14-10-2018 IPR007351 Uncharacterised protein YjbR PhaeoP54_00968 afaac46bd2ca121e8e76cedb50e78f2f 132 SUPERFAMILY SSF142906 1 119 1.57E-31 T 14-10-2018 IPR038056 YjbR-like superfamily PhaeoP54_03267 6272e7ecd007357c46f96682ac07d3f0 195 SUPERFAMILY SSF89392 25 188 1.06E-25 T 14-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX PhaeoP54_03267 6272e7ecd007357c46f96682ac07d3f0 195 Gene3D G3DSA:2.50.20.10 25 193 6.4E-20 T 14-10-2018 PhaeoP54_03267 6272e7ecd007357c46f96682ac07d3f0 195 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 34 188 1.0E-21 T 14-10-2018 IPR004564 Outer membrane lipoprotein carrier protein LolA-like PhaeoP54_01393 5b4558a6568c9514353a1452a86c6096 194 Pfam PF01464 Transglycosylase SLT domain 82 185 2.5E-28 T 14-10-2018 IPR008258 Transglycosylase SLT domain 1 PhaeoP54_01393 5b4558a6568c9514353a1452a86c6096 194 Gene3D G3DSA:1.10.530.10 72 194 3.1E-40 T 14-10-2018 PhaeoP54_01393 5b4558a6568c9514353a1452a86c6096 194 SUPERFAMILY SSF53955 70 192 8.8E-44 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily PhaeoP54_03810 0e8b5918794ed8202cbb4a363662840b 309 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 51 208 9.3E-28 T 14-10-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 PhaeoP54_03810 0e8b5918794ed8202cbb4a363662840b 309 SMART SM00470 31 118 4.4E-23 T 14-10-2018 IPR003115 ParB/Sulfiredoxin PhaeoP54_03810 0e8b5918794ed8202cbb4a363662840b 309 Gene3D G3DSA:3.90.1530.30 47 104 2.2E-10 T 14-10-2018 PhaeoP54_03810 0e8b5918794ed8202cbb4a363662840b 309 SUPERFAMILY SSF109709 111 174 1.6E-5 T 14-10-2018 PhaeoP54_03810 0e8b5918794ed8202cbb4a363662840b 309 SUPERFAMILY SSF110849 51 120 1.74E-15 T 14-10-2018 IPR036086 ParB/Sulfiredoxin superfamily PhaeoP54_03810 0e8b5918794ed8202cbb4a363662840b 309 TIGRFAM TIGR03454 partition_RepB: plasmid partitioning protein RepB 29 306 3.0E-62 T 14-10-2018 IPR017819 Plasmid partitioning protein, RepB PhaeoP54_03810 0e8b5918794ed8202cbb4a363662840b 309 Pfam PF07506 RepB plasmid partitioning protein 120 284 9.6E-8 T 14-10-2018 IPR011111 RepB plasmid partition PhaeoP54_03810 0e8b5918794ed8202cbb4a363662840b 309 Pfam PF02195 ParB-like nuclease domain 49 117 2.3E-15 T 14-10-2018 IPR003115 ParB/Sulfiredoxin PhaeoP54_01848 b851ec099a3fbb16107a352645f48eae 190 Gene3D G3DSA:3.30.70.1520 24 104 3.7E-38 T 14-10-2018 PhaeoP54_01848 b851ec099a3fbb16107a352645f48eae 190 Gene3D G3DSA:3.30.1360.120 19 180 3.7E-38 T 14-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 PhaeoP54_01848 b851ec099a3fbb16107a352645f48eae 190 SUPERFAMILY SSF103025 60 179 4.32E-15 T 14-10-2018 PhaeoP54_01848 b851ec099a3fbb16107a352645f48eae 190 Pfam PF04268 Sarcosine oxidase, gamma subunit family 36 179 9.1E-27 T 14-10-2018 IPR007375 Sarcosine oxidase, gamma subunit KEGG: 00260+1.5.3.1|MetaCyc: PWY-3661|MetaCyc: PWY-4722 PhaeoP54_03153 5e5c50e38203f55107c781bb745d5e69 418 Pfam PF09298 Fumarylacetoacetase N-terminal 21 117 2.2E-21 T 14-10-2018 IPR015377 Fumarylacetoacetase, N-terminal GO:0004334|GO:0009072 KEGG: 00350+3.7.1.2|KEGG: 00643+3.7.1.2|Reactome: R-HSA-71182 PhaeoP54_03153 5e5c50e38203f55107c781bb745d5e69 418 TIGRFAM TIGR01266 fum_ac_acetase: fumarylacetoacetase 6 412 5.1E-151 T 14-10-2018 IPR005959 Fumarylacetoacetase GO:0004334|GO:0009072 KEGG: 00350+3.7.1.2|KEGG: 00643+3.7.1.2|Reactome: R-HSA-71182 PhaeoP54_03153 5e5c50e38203f55107c781bb745d5e69 418 Gene3D G3DSA:2.30.30.230 1 114 4.6E-29 T 14-10-2018 IPR036462 Fumarylacetoacetase, N-terminal domain superfamily GO:0004334|GO:0009072 KEGG: 00350+3.7.1.2|KEGG: 00643+3.7.1.2|Reactome: R-HSA-71182 PhaeoP54_03153 5e5c50e38203f55107c781bb745d5e69 418 SUPERFAMILY SSF56529 121 410 2.49E-96 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 PhaeoP54_03153 5e5c50e38203f55107c781bb745d5e69 418 SUPERFAMILY SSF63433 5 117 2.88E-31 T 14-10-2018 IPR036462 Fumarylacetoacetase, N-terminal domain superfamily GO:0004334|GO:0009072 KEGG: 00350+3.7.1.2|KEGG: 00643+3.7.1.2|Reactome: R-HSA-71182 PhaeoP54_03153 5e5c50e38203f55107c781bb745d5e69 418 Gene3D G3DSA:3.90.850.10 115 413 9.7E-119 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 PhaeoP54_03153 5e5c50e38203f55107c781bb745d5e69 418 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 123 408 5.3E-61 T 14-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 PhaeoP54_02449 b15aea737d72fa7d7e2ca8f79353fdc6 347 Gene3D G3DSA:3.40.190.10 28 257 3.0E-44 T 14-10-2018 PhaeoP54_02449 b15aea737d72fa7d7e2ca8f79353fdc6 347 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 55 256 2.4E-25 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PhaeoP54_02449 b15aea737d72fa7d7e2ca8f79353fdc6 347 Gene3D G3DSA:3.40.190.10 130 225 3.0E-44 T 14-10-2018 PhaeoP54_02449 b15aea737d72fa7d7e2ca8f79353fdc6 347 SUPERFAMILY SSF53850 29 258 2.48E-40 T 14-10-2018 PhaeoP54_02449 b15aea737d72fa7d7e2ca8f79353fdc6 347 SMART SM00062 38 267 1.6E-43 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PhaeoP54_02910 00639938b632c783d37392eecbaacea8 368 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 8 45 4.9E-8 T 14-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain PhaeoP54_02910 00639938b632c783d37392eecbaacea8 368 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 184 365 8.5E-28 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PhaeoP54_02910 00639938b632c783d37392eecbaacea8 368 Gene3D G3DSA:1.10.3720.10 154 366 6.5E-19 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_02910 00639938b632c783d37392eecbaacea8 368 SUPERFAMILY SSF161098 163 348 5.36E-21 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_01339 b36e9fc908048400d690c11877f89fd3 235 Gene3D G3DSA:3.40.50.300 8 235 2.4E-65 T 14-10-2018 PhaeoP54_01339 b36e9fc908048400d690c11877f89fd3 235 SMART SM00382 38 227 7.4E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_01339 b36e9fc908048400d690c11877f89fd3 235 SUPERFAMILY SSF52540 10 232 1.24E-65 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_01339 b36e9fc908048400d690c11877f89fd3 235 Pfam PF00005 ABC transporter 30 177 5.8E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PhaeoP54_01339 b36e9fc908048400d690c11877f89fd3 235 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PhaeoP54_03731 8c6035078f65eaec21de15a8e8cb90fa 407 Pfam PF05940 NnrS protein 21 401 2.5E-101 T 14-10-2018 IPR010266 NnrS PhaeoP54_03915 63d71fcc8ee8fc6115197038df6a5ef3 361 Gene3D G3DSA:1.10.3290.10 37 277 1.3E-45 T 14-10-2018 IPR036597 Fido-like domain superfamily PhaeoP54_03915 63d71fcc8ee8fc6115197038df6a5ef3 361 Pfam PF02661 Fic/DOC family 110 213 1.0E-18 T 14-10-2018 IPR003812 Fido domain PhaeoP54_03915 63d71fcc8ee8fc6115197038df6a5ef3 361 Pfam PF13776 Domain of unknown function (DUF4172) 4 82 1.9E-18 T 14-10-2018 IPR025230 Domain of unknown function DUF4172 PhaeoP54_03915 63d71fcc8ee8fc6115197038df6a5ef3 361 SUPERFAMILY SSF140931 96 279 3.14E-33 T 14-10-2018 IPR036597 Fido-like domain superfamily PhaeoP54_03915 63d71fcc8ee8fc6115197038df6a5ef3 361 SUPERFAMILY SSF46785 293 357 4.71E-5 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_01026 0c0f67b89bdbd2c081157b36a99de66f 249 SUPERFAMILY SSF55681 4 202 2.98E-46 T 14-10-2018 PhaeoP54_01026 0c0f67b89bdbd2c081157b36a99de66f 249 Pfam PF03099 Biotin/lipoate A/B protein ligase family 18 138 1.3E-14 T 14-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 PhaeoP54_01026 0c0f67b89bdbd2c081157b36a99de66f 249 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 13 247 1.4E-34 T 14-10-2018 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 PhaeoP54_01026 0c0f67b89bdbd2c081157b36a99de66f 249 Pfam PF02237 Biotin protein ligase C terminal domain 207 249 1.7E-6 T 14-10-2018 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 PhaeoP54_01026 0c0f67b89bdbd2c081157b36a99de66f 249 Gene3D G3DSA:3.30.930.10 6 202 9.5E-46 T 14-10-2018 PhaeoP54_02055 5ab8f8e3575590f38f426ed18d553584 451 Gene3D G3DSA:3.40.50.800 334 447 5.5E-26 T 14-10-2018 IPR036621 Anticodon-binding domain superfamily PhaeoP54_02055 5ab8f8e3575590f38f426ed18d553584 451 SUPERFAMILY SSF52954 336 446 6.87E-27 T 14-10-2018 PhaeoP54_02055 5ab8f8e3575590f38f426ed18d553584 451 Pfam PF03129 Anticodon binding domain 349 440 2.4E-17 T 14-10-2018 IPR004154 Anticodon-binding PhaeoP54_02055 5ab8f8e3575590f38f426ed18d553584 451 Gene3D G3DSA:3.30.930.10 1 333 4.2E-107 T 14-10-2018 PhaeoP54_02055 5ab8f8e3575590f38f426ed18d553584 451 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 2.6E-13 T 14-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 PhaeoP54_02055 5ab8f8e3575590f38f426ed18d553584 451 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 2.6E-13 T 14-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 PhaeoP54_02055 5ab8f8e3575590f38f426ed18d553584 451 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 2.6E-13 T 14-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 PhaeoP54_02055 5ab8f8e3575590f38f426ed18d553584 451 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 2.6E-13 T 14-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 PhaeoP54_02055 5ab8f8e3575590f38f426ed18d553584 451 SUPERFAMILY SSF55681 10 350 1.06E-86 T 14-10-2018 PhaeoP54_02055 5ab8f8e3575590f38f426ed18d553584 451 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 95 331 4.2E-33 T 14-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 PhaeoP54_02055 5ab8f8e3575590f38f426ed18d553584 451 Hamap MF_01570 Proline--tRNA ligase [proS]. 1 440 61.691 T 14-10-2018 IPR023716 Proline-tRNA ligase, class IIa, type 2 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 PhaeoP54_01260 37517a9aa0f4b2dba7feda89dedf9674 131 Pfam PF01042 Endoribonuclease L-PSP 12 129 8.9E-20 T 14-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 PhaeoP54_01260 37517a9aa0f4b2dba7feda89dedf9674 131 Gene3D G3DSA:3.30.1330.40 3 131 1.2E-27 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 PhaeoP54_01260 37517a9aa0f4b2dba7feda89dedf9674 131 SUPERFAMILY SSF55298 5 130 1.07E-29 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 PhaeoP54_00683 19c0e7834161f4a3f01edca014836600 345 Gene3D G3DSA:3.40.50.2300 102 306 6.5E-24 T 14-10-2018 PhaeoP54_00683 19c0e7834161f4a3f01edca014836600 345 Gene3D G3DSA:1.10.260.40 1 58 8.8E-13 T 14-10-2018 PhaeoP54_00683 19c0e7834161f4a3f01edca014836600 345 SUPERFAMILY SSF53822 102 316 1.15E-15 T 14-10-2018 IPR028082 Periplasmic binding protein-like I PhaeoP54_00683 19c0e7834161f4a3f01edca014836600 345 Pfam PF00356 Bacterial regulatory proteins, lacI family 7 47 1.7E-11 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 PhaeoP54_00683 19c0e7834161f4a3f01edca014836600 345 Gene3D G3DSA:3.40.50.2300 165 302 6.5E-24 T 14-10-2018 PhaeoP54_00683 19c0e7834161f4a3f01edca014836600 345 SMART SM00354 4 71 2.4E-4 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 PhaeoP54_00683 19c0e7834161f4a3f01edca014836600 345 Pfam PF13407 Periplasmic binding protein domain 104 301 5.0E-17 T 14-10-2018 IPR025997 Periplasmic binding protein PhaeoP54_00683 19c0e7834161f4a3f01edca014836600 345 SUPERFAMILY SSF47413 6 47 6.83E-9 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 PhaeoP54_02519 79afe47b3cedfc1666e951c954cd186f 137 SUPERFAMILY SSF54427 26 130 8.77E-6 T 14-10-2018 IPR032710 NTF2-like domain superfamily PhaeoP54_02519 79afe47b3cedfc1666e951c954cd186f 137 Pfam PF16156 Domain of unknown function (DUF4864) 30 128 2.4E-33 T 14-10-2018 IPR032347 Protein of unknown function DUF4864 PhaeoP54_01755 0a5486a32f6aeefc1253b87c4d6407a0 396 Gene3D G3DSA:3.40.50.720 21 174 3.0E-46 T 14-10-2018 PhaeoP54_01755 0a5486a32f6aeefc1253b87c4d6407a0 396 Gene3D G3DSA:3.40.50.300 175 382 3.8E-68 T 14-10-2018 PhaeoP54_01755 0a5486a32f6aeefc1253b87c4d6407a0 396 Pfam PF17396 Domain of unknown function (DUF1611_N) Rossmann-like domain 75 172 7.6E-24 T 14-10-2018 IPR035402 Domain of unknown function DUF1611-N, Rossmann-like domain PhaeoP54_01755 0a5486a32f6aeefc1253b87c4d6407a0 396 Pfam PF07755 Domain of unknown function (DUF1611_C) P-loop domain 180 376 2.2E-66 T 14-10-2018 IPR035086 Domain of unknown function DUF1611, P-loop PhaeoP54_01755 0a5486a32f6aeefc1253b87c4d6407a0 396 SUPERFAMILY SSF52540 35 382 5.78E-105 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_01755 0a5486a32f6aeefc1253b87c4d6407a0 396 PIRSF PIRSF026760 37 387 4.9E-119 T 14-10-2018 IPR011669 Uncharacterised conserved protein UCP026760 PhaeoP54_03792 b2d6c1637df33a8911e949ab49943928 356 Gene3D G3DSA:3.40.50.1980 26 245 1.1E-38 T 14-10-2018 PhaeoP54_03792 b2d6c1637df33a8911e949ab49943928 356 Gene3D G3DSA:3.40.50.1980 246 356 3.7E-35 T 14-10-2018 PhaeoP54_03792 b2d6c1637df33a8911e949ab49943928 356 Pfam PF01297 Zinc-uptake complex component A periplasmic 27 332 4.7E-48 T 14-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 PhaeoP54_03792 b2d6c1637df33a8911e949ab49943928 356 SUPERFAMILY SSF53807 22 355 6.67E-62 T 14-10-2018 PhaeoP54_01072 9e98ee896caa7505b3192ef431cf414e 394 Pfam PF05762 VWA domain containing CoxE-like protein 190 275 9.7E-9 T 14-10-2018 IPR008912 Uncharacterised protein family CoxE-like PhaeoP54_02459 1a71cb1f21240bd20319cf50370ac689 401 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 137 399 1.2E-12 T 14-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 PhaeoP54_02459 1a71cb1f21240bd20319cf50370ac689 401 SUPERFAMILY SSF56529 128 400 5.89E-22 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 PhaeoP54_01101 fbe011bac45ed168d290209ecb2c59e2 374 SUPERFAMILY SSF53659 15 349 7.81E-97 T 14-10-2018 PhaeoP54_01101 fbe011bac45ed168d290209ecb2c59e2 374 PIRSF PIRSF002465 13 354 2.2E-120 T 14-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 PhaeoP54_01101 fbe011bac45ed168d290209ecb2c59e2 374 Gene3D G3DSA:3.40.718.10 14 362 4.5E-113 T 14-10-2018 PhaeoP54_01101 fbe011bac45ed168d290209ecb2c59e2 374 Pfam PF02504 Fatty acid synthesis protein 16 341 1.0E-111 T 14-10-2018 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 PhaeoP54_01101 fbe011bac45ed168d290209ecb2c59e2 374 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 355 129.972 T 14-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 PhaeoP54_01101 fbe011bac45ed168d290209ecb2c59e2 374 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 17 350 6.1E-90 T 14-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 PhaeoP54_00697 0bbb6008e5b4b1aac17f53a89b6a77a0 639 PIRSF PIRSF001084 2 636 4.9E-166 T 14-10-2018 IPR003476 Glycoside hydrolase, family 42 GO:0004565|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 PhaeoP54_00697 0bbb6008e5b4b1aac17f53a89b6a77a0 639 Gene3D G3DSA:3.40.50.880 400 596 3.9E-51 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like PhaeoP54_00697 0bbb6008e5b4b1aac17f53a89b6a77a0 639 Pfam PF08532 Beta-galactosidase trimerisation domain 402 591 7.8E-25 T 14-10-2018 IPR013738 Beta-galactosidase trimerisation GO:0004565|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 PhaeoP54_00697 0bbb6008e5b4b1aac17f53a89b6a77a0 639 SUPERFAMILY SSF51445 5 395 3.73E-122 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily PhaeoP54_00697 0bbb6008e5b4b1aac17f53a89b6a77a0 639 Gene3D G3DSA:3.20.20.80 4 393 5.5E-129 T 14-10-2018 PhaeoP54_00697 0bbb6008e5b4b1aac17f53a89b6a77a0 639 SUPERFAMILY SSF52317 400 591 4.53E-48 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like PhaeoP54_00697 0bbb6008e5b4b1aac17f53a89b6a77a0 639 Pfam PF02449 Beta-galactosidase 8 391 1.2E-144 T 14-10-2018 IPR013529 Glycoside hydrolase, family 42, N-terminal GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 PhaeoP54_00726 f5684301601de547a0a2720bf876af73 366 TIGRFAM TIGR01263 4HPPD: 4-hydroxyphenylpyruvate dioxygenase 23 361 5.0E-112 T 14-10-2018 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 PhaeoP54_00726 f5684301601de547a0a2720bf876af73 366 PIRSF PIRSF009283 7 363 2.5E-102 T 14-10-2018 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 PhaeoP54_00726 f5684301601de547a0a2720bf876af73 366 Gene3D G3DSA:3.10.180.10 14 161 3.2E-40 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PhaeoP54_00726 f5684301601de547a0a2720bf876af73 366 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 166 280 7.8E-15 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain PhaeoP54_00726 f5684301601de547a0a2720bf876af73 366 SUPERFAMILY SSF54593 13 349 1.45E-73 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PhaeoP54_00726 f5684301601de547a0a2720bf876af73 366 Pfam PF14696 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal 16 151 6.3E-47 T 14-10-2018 PhaeoP54_00726 f5684301601de547a0a2720bf876af73 366 Gene3D G3DSA:3.10.180.10 162 363 9.2E-60 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PhaeoP54_02306 485602909406f1e95925d595f6f68763 394 PIRSF PIRSF000521 10 148 1.5E-11 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PhaeoP54_02306 485602909406f1e95925d595f6f68763 394 PIRSF PIRSF000521 163 388 4.1E-37 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PhaeoP54_02306 485602909406f1e95925d595f6f68763 394 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 5 384 1.8E-138 T 14-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 PhaeoP54_02306 485602909406f1e95925d595f6f68763 394 Gene3D G3DSA:3.40.640.10 48 293 1.4E-138 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PhaeoP54_02306 485602909406f1e95925d595f6f68763 394 Pfam PF00202 Aminotransferase class-III 12 384 1.6E-114 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PhaeoP54_02306 485602909406f1e95925d595f6f68763 394 Gene3D G3DSA:3.90.1150.10 13 377 1.4E-138 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 PhaeoP54_02306 485602909406f1e95925d595f6f68763 394 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 211 248 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PhaeoP54_02306 485602909406f1e95925d595f6f68763 394 SUPERFAMILY SSF53383 4 384 1.33E-125 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PhaeoP54_02306 485602909406f1e95925d595f6f68763 394 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 4 388 65.582 T 14-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 PhaeoP54_02325 8130bf03949f8212e6116c0e19d95b4b 128 SUPERFAMILY SSF54211 14 124 3.11E-25 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold PhaeoP54_02325 8130bf03949f8212e6116c0e19d95b4b 128 Gene3D G3DSA:3.30.230.30 8 127 9.9E-19 T 14-10-2018 IPR036956 Impact, N-terminal domain superfamily PhaeoP54_02325 8130bf03949f8212e6116c0e19d95b4b 128 ProSitePatterns PS00910 Uncharacterized protein family UPF0029 signature. 78 107 - T 14-10-2018 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site PhaeoP54_02325 8130bf03949f8212e6116c0e19d95b4b 128 Pfam PF01205 Uncharacterized protein family UPF0029 21 120 1.1E-22 T 14-10-2018 IPR001498 Impact, N-terminal PhaeoP54_01214 17c9bc745cd0e12ff250c3ef6594c6d6 407 Gene3D G3DSA:3.40.50.10540 17 375 3.4E-136 T 14-10-2018 IPR023606 CoA-transferase family III domain superfamily PhaeoP54_01214 17c9bc745cd0e12ff250c3ef6594c6d6 407 Gene3D G3DSA:3.30.1540.10 247 338 3.4E-136 T 14-10-2018 PhaeoP54_01214 17c9bc745cd0e12ff250c3ef6594c6d6 407 SUPERFAMILY SSF89796 16 394 8.63E-131 T 14-10-2018 IPR023606 CoA-transferase family III domain superfamily PhaeoP54_01214 17c9bc745cd0e12ff250c3ef6594c6d6 407 Pfam PF02515 CoA-transferase family III 18 391 2.9E-128 T 14-10-2018 IPR003673 CoA-transferase family III GO:0003824 PhaeoP54_03473 fcfed7846bc39765e6b376bde06bbc58 159 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 12 140 9.7E-28 T 14-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 PhaeoP54_03473 fcfed7846bc39765e6b376bde06bbc58 159 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 12 130 9.5E-33 T 14-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 PhaeoP54_03473 fcfed7846bc39765e6b376bde06bbc58 159 SUPERFAMILY SSF52540 25 131 2.49E-13 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_03473 fcfed7846bc39765e6b376bde06bbc58 159 Gene3D G3DSA:3.40.50.300 5 155 3.1E-35 T 14-10-2018 PhaeoP54_04067 1ff5ee7f138ae901d70a611ee2177a34 732 Pfam PF06082 Exopolysaccharide biosynthesis protein YbjH 46 716 9.8E-229 T 14-10-2018 IPR010344 Exopolysaccharide biosynthesis protein YbjH PhaeoP54_03179 4adea697b5627721d2353ffc4ba3be65 497 PIRSF PIRSF006429 2 495 3.7E-149 T 14-10-2018 IPR024188 Glutamate synthase large subunit-like protein PhaeoP54_03179 4adea697b5627721d2353ffc4ba3be65 497 SUPERFAMILY SSF51395 13 490 5.92E-126 T 14-10-2018 PhaeoP54_03179 4adea697b5627721d2353ffc4ba3be65 497 Gene3D G3DSA:3.20.20.70 134 488 4.0E-105 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PhaeoP54_03179 4adea697b5627721d2353ffc4ba3be65 497 Pfam PF01645 Conserved region in glutamate synthase 144 461 7.4E-88 T 14-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 PhaeoP54_03258 8ca1eb62323733dc80c77f726e6b82f9 524 Pfam PF01019 Gamma-glutamyltranspeptidase 32 519 4.2E-136 T 14-10-2018 PhaeoP54_03258 8ca1eb62323733dc80c77f726e6b82f9 524 Gene3D G3DSA:3.60.20.40 348 524 8.1E-63 T 14-10-2018 PhaeoP54_03258 8ca1eb62323733dc80c77f726e6b82f9 524 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 371 389 4.7E-32 T 14-10-2018 PhaeoP54_03258 8ca1eb62323733dc80c77f726e6b82f9 524 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 109 127 4.7E-32 T 14-10-2018 PhaeoP54_03258 8ca1eb62323733dc80c77f726e6b82f9 524 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 347 365 4.7E-32 T 14-10-2018 PhaeoP54_03258 8ca1eb62323733dc80c77f726e6b82f9 524 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 39 64 4.7E-32 T 14-10-2018 PhaeoP54_03258 8ca1eb62323733dc80c77f726e6b82f9 524 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 127 146 4.7E-32 T 14-10-2018 PhaeoP54_03258 8ca1eb62323733dc80c77f726e6b82f9 524 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 223 239 4.7E-32 T 14-10-2018 PhaeoP54_03258 8ca1eb62323733dc80c77f726e6b82f9 524 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 252 271 4.7E-32 T 14-10-2018 PhaeoP54_03258 8ca1eb62323733dc80c77f726e6b82f9 524 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 402 417 4.7E-32 T 14-10-2018 PhaeoP54_03258 8ca1eb62323733dc80c77f726e6b82f9 524 SUPERFAMILY SSF56235 3 524 4.44E-157 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal PhaeoP54_03258 8ca1eb62323733dc80c77f726e6b82f9 524 Gene3D G3DSA:1.10.246.130 239 347 1.2E-22 T 14-10-2018 PhaeoP54_03123 551443d583aee41971e858e23badc04d 181 Hamap MF_01398 ATP synthase subunit b [atpF]. 28 165 10.787 T 14-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 PhaeoP54_03123 551443d583aee41971e858e23badc04d 181 Pfam PF00430 ATP synthase B/B' CF(0) 34 161 1.1E-17 T 14-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 PhaeoP54_03127 794a0e276a77c652f3c096e2c6295721 297 SUPERFAMILY SSF103481 192 283 3.92E-11 T 14-10-2018 PhaeoP54_03127 794a0e276a77c652f3c096e2c6295721 297 SUPERFAMILY SSF103481 46 140 3.27E-12 T 14-10-2018 PhaeoP54_03127 794a0e276a77c652f3c096e2c6295721 297 Pfam PF00892 EamA-like transporter family 151 283 1.2E-17 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 PhaeoP54_03127 794a0e276a77c652f3c096e2c6295721 297 Pfam PF00892 EamA-like transporter family 5 138 3.4E-17 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 PhaeoP54_01352 07e8ad5fcc6cdb42c6ba746e833ce16d 338 Gene3D G3DSA:3.40.47.10 1 168 3.5E-14 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 PhaeoP54_01352 07e8ad5fcc6cdb42c6ba746e833ce16d 338 SUPERFAMILY SSF53901 109 312 2.67E-12 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 PhaeoP54_01352 07e8ad5fcc6cdb42c6ba746e833ce16d 338 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 114 177 1.2E-5 T 14-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 PhaeoP54_01352 07e8ad5fcc6cdb42c6ba746e833ce16d 338 SUPERFAMILY SSF53901 3 151 7.68E-8 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 PhaeoP54_01352 07e8ad5fcc6cdb42c6ba746e833ce16d 338 Gene3D G3DSA:3.40.47.10 197 316 5.5E-8 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 PhaeoP54_01288 5508550a98f32a73fdd873958ff763c2 384 Gene3D G3DSA:3.20.20.30 13 365 1.1E-89 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 PhaeoP54_01288 5508550a98f32a73fdd873958ff763c2 384 Pfam PF00296 Luciferase-like monooxygenase 39 333 7.0E-59 T 14-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 PhaeoP54_01288 5508550a98f32a73fdd873958ff763c2 384 SUPERFAMILY SSF51679 28 359 1.96E-75 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 PhaeoP54_02513 fb652d292c13f0efd6787c712666ee2d 61 Pfam PF13396 Phospholipase_D-nuclease N-terminal 12 53 2.7E-11 T 14-10-2018 IPR027379 Cardiolipin synthase N-terminal PhaeoP54_03430 696260b0203a1eddabbf5ebafccd6453 152 SUPERFAMILY SSF140736 18 151 1.15E-54 T 14-10-2018 IPR036287 Rv1873-like superfamily PhaeoP54_03430 696260b0203a1eddabbf5ebafccd6453 152 PIRSF PIRSF008546 14 152 1.5E-46 T 14-10-2018 IPR014937 Protein of unknown function DUF1810 PhaeoP54_03430 696260b0203a1eddabbf5ebafccd6453 152 Gene3D G3DSA:1.25.40.380 12 152 9.9E-50 T 14-10-2018 IPR036287 Rv1873-like superfamily PhaeoP54_03430 696260b0203a1eddabbf5ebafccd6453 152 Pfam PF08837 Protein of unknown function (DUF1810) 18 150 2.7E-53 T 14-10-2018 IPR014937 Protein of unknown function DUF1810 PhaeoP54_00812 109bec326584710db4ec0383e8f14dad 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 124 132 4.4E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_00812 109bec326584710db4ec0383e8f14dad 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 70 81 4.4E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_00812 109bec326584710db4ec0383e8f14dad 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 144 163 4.4E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_00812 109bec326584710db4ec0383e8f14dad 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 209 229 1.2E-31 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_00812 109bec326584710db4ec0383e8f14dad 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 70 81 1.2E-31 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_00812 109bec326584710db4ec0383e8f14dad 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 118 134 1.2E-31 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_00812 109bec326584710db4ec0383e8f14dad 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 1.2E-31 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_00812 109bec326584710db4ec0383e8f14dad 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 165 182 1.2E-31 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_00812 109bec326584710db4ec0383e8f14dad 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 144 163 1.2E-31 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_00812 109bec326584710db4ec0383e8f14dad 252 SUPERFAMILY SSF51735 2 243 2.04E-70 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PhaeoP54_00812 109bec326584710db4ec0383e8f14dad 252 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 131 159 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 PhaeoP54_00812 109bec326584710db4ec0383e8f14dad 252 Gene3D G3DSA:3.40.50.720 1 248 1.9E-68 T 14-10-2018 PhaeoP54_00812 109bec326584710db4ec0383e8f14dad 252 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 11 243 1.2E-55 T 14-10-2018 PhaeoP54_02658 4029f15ad4009f15e8a65007180a6689 407 SUPERFAMILY SSF103473 6 186 3.53E-9 T 14-10-2018 IPR036259 MFS transporter superfamily PhaeoP54_02658 4029f15ad4009f15e8a65007180a6689 407 Pfam PF13347 MFS/sugar transport protein 9 401 2.6E-36 T 14-10-2018 PhaeoP54_02658 4029f15ad4009f15e8a65007180a6689 407 Gene3D G3DSA:1.20.1250.20 2 191 4.9E-6 T 14-10-2018 PhaeoP54_02658 4029f15ad4009f15e8a65007180a6689 407 Gene3D G3DSA:1.20.1250.20 210 404 1.3E-6 T 14-10-2018 PhaeoP54_02658 4029f15ad4009f15e8a65007180a6689 407 SUPERFAMILY SSF103473 208 403 7.06E-8 T 14-10-2018 IPR036259 MFS transporter superfamily PhaeoP54_01492 aa744851ba753d4d781f034d45f93321 267 SUPERFAMILY SSF53613 3 263 7.64E-40 T 14-10-2018 IPR029056 Ribokinase-like PhaeoP54_01492 aa744851ba753d4d781f034d45f93321 267 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 10 34 - T 14-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 PhaeoP54_01492 aa744851ba753d4d781f034d45f93321 267 Pfam PF00294 pfkB family carbohydrate kinase 4 261 2.6E-28 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB PhaeoP54_01492 aa744851ba753d4d781f034d45f93321 267 Gene3D G3DSA:3.40.1190.20 1 266 2.7E-42 T 14-10-2018 IPR029056 Ribokinase-like PhaeoP54_02731 f8e57f4f34eebbde3b4e0ababdc7a5e5 177 Gene3D G3DSA:2.30.30.40 46 109 1.3E-6 T 14-10-2018 PhaeoP54_02731 f8e57f4f34eebbde3b4e0ababdc7a5e5 177 Pfam PF06347 Bacterial SH3 domain 52 108 1.2E-19 T 14-10-2018 IPR010466 Protein of unknown function DUF1058 PhaeoP54_02731 f8e57f4f34eebbde3b4e0ababdc7a5e5 177 Pfam PF06347 Bacterial SH3 domain 117 169 5.6E-13 T 14-10-2018 IPR010466 Protein of unknown function DUF1058 PhaeoP54_00698 659b5a05c8f00b2863057b28e9f9e697 291 SUPERFAMILY SSF63829 15 288 6.54E-58 T 14-10-2018 PhaeoP54_00698 659b5a05c8f00b2863057b28e9f9e697 291 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 138 160 2.2E-24 T 14-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) PhaeoP54_00698 659b5a05c8f00b2863057b28e9f9e697 291 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 244 262 2.2E-24 T 14-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) PhaeoP54_00698 659b5a05c8f00b2863057b28e9f9e697 291 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 24 41 2.2E-24 T 14-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) PhaeoP54_00698 659b5a05c8f00b2863057b28e9f9e697 291 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 202 219 2.2E-24 T 14-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) PhaeoP54_00698 659b5a05c8f00b2863057b28e9f9e697 291 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 98 119 2.2E-24 T 14-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) PhaeoP54_00698 659b5a05c8f00b2863057b28e9f9e697 291 Pfam PF08450 SMP-30/Gluconolaconase/LRE-like region 23 262 1.1E-62 T 14-10-2018 IPR013658 SMP-30/Gluconolactonase/LRE-like region PhaeoP54_00698 659b5a05c8f00b2863057b28e9f9e697 291 Gene3D G3DSA:2.120.10.30 6 290 8.4E-83 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like PhaeoP54_01363 574ee247a5d4994f6ea1ee83ca6cde92 355 Pfam PF12833 Helix-turn-helix domain 257 335 1.2E-20 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PhaeoP54_01363 574ee247a5d4994f6ea1ee83ca6cde92 355 SMART SM00342 251 334 6.3E-19 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PhaeoP54_01363 574ee247a5d4994f6ea1ee83ca6cde92 355 Gene3D G3DSA:1.10.10.60 231 339 6.9E-27 T 14-10-2018 PhaeoP54_01363 574ee247a5d4994f6ea1ee83ca6cde92 355 SUPERFAMILY SSF46689 287 337 8.06E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PhaeoP54_00528 d75c43fd1007a71bc858ed7fed67f90d 120 SUPERFAMILY SSF51230 1 119 3.53E-43 T 14-10-2018 IPR011053 Single hybrid motif PhaeoP54_00528 d75c43fd1007a71bc858ed7fed67f90d 120 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 1 117 1.8E-43 T 14-10-2018 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 PhaeoP54_00528 d75c43fd1007a71bc858ed7fed67f90d 120 Gene3D G3DSA:2.40.50.100 1 120 1.0E-45 T 14-10-2018 PhaeoP54_00528 d75c43fd1007a71bc858ed7fed67f90d 120 Pfam PF01597 Glycine cleavage H-protein 2 118 1.5E-43 T 14-10-2018 IPR033753 Glycine cleavage system H-protein/Simiate PhaeoP54_00528 d75c43fd1007a71bc858ed7fed67f90d 120 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 42 71 - T 14-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 PhaeoP54_00528 d75c43fd1007a71bc858ed7fed67f90d 120 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 1 120 37.457 T 14-10-2018 IPR002930 Glycine cleavage system H-protein GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 PhaeoP54_02986 bf833984ce83ca00c3ac939d42db7a28 216 Pfam PF01926 50S ribosome-binding GTPase 46 163 1.2E-20 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 PhaeoP54_02986 bf833984ce83ca00c3ac939d42db7a28 216 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 28 212 9.2E-66 T 14-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 PhaeoP54_02986 bf833984ce83ca00c3ac939d42db7a28 216 SUPERFAMILY SSF52540 29 213 5.68E-37 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_02986 bf833984ce83ca00c3ac939d42db7a28 216 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 34 216 26.019 T 14-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 PhaeoP54_02986 bf833984ce83ca00c3ac939d42db7a28 216 Gene3D G3DSA:3.40.50.300 21 215 1.9E-52 T 14-10-2018 PhaeoP54_01744 e5d91764fdf690c85d66f54a3fd0cb32 336 Pfam PF11376 Protein of unknown function (DUF3179) 67 330 1.1E-84 T 14-10-2018 IPR021516 Protein of unknown function DUF3179 PhaeoP54_03447 e11262898b4067423c01ba6c8286bc6f 624 SMART SM01228 540 610 2.3E-27 T 14-10-2018 PhaeoP54_03447 e11262898b4067423c01ba6c8286bc6f 624 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 271 285 - T 14-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 PhaeoP54_03447 e11262898b4067423c01ba6c8286bc6f 624 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 6 613 1.6E-240 T 14-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 PhaeoP54_03447 e11262898b4067423c01ba6c8286bc6f 624 SUPERFAMILY SSF51905 5 259 1.83E-46 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PhaeoP54_03447 e11262898b4067423c01ba6c8286bc6f 624 Gene3D G3DSA:1.10.150.570 563 614 5.0E-15 T 14-10-2018 PhaeoP54_03447 e11262898b4067423c01ba6c8286bc6f 624 Pfam PF01134 Glucose inhibited division protein A 7 397 1.7E-158 T 14-10-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 PhaeoP54_03447 e11262898b4067423c01ba6c8286bc6f 624 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 4 617 39.618 T 14-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 PhaeoP54_03447 e11262898b4067423c01ba6c8286bc6f 624 Pfam PF13932 GidA associated domain 400 608 5.8E-66 T 14-10-2018 IPR026904 GidA associated domain 3 Reactome: R-HSA-6787450 PhaeoP54_03447 e11262898b4067423c01ba6c8286bc6f 624 Gene3D G3DSA:3.50.50.60 303 456 4.5E-54 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PhaeoP54_03447 e11262898b4067423c01ba6c8286bc6f 624 Gene3D G3DSA:3.50.50.60 1 217 5.6E-89 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PhaeoP54_03447 e11262898b4067423c01ba6c8286bc6f 624 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 366 389 - T 14-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 PhaeoP54_01843 896deb30ee31d945e979ac257c1a0a74 150 Pfam PF10116 Protein required for attachment to host cells 10 143 6.8E-39 T 14-10-2018 IPR019291 Host attachment protein PhaeoP54_03369 dc99507818540472189d7925941ce5d2 395 TIGRFAM TIGR01822 2am3keto_CoA: glycine C-acetyltransferase 9 394 1.1E-189 T 14-10-2018 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase GO:0006567|GO:0008890 KEGG: 00260+2.3.1.29|Reactome: R-HSA-8849175 PhaeoP54_03369 dc99507818540472189d7925941ce5d2 395 Gene3D G3DSA:3.40.640.10 57 293 8.0E-131 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PhaeoP54_03369 dc99507818540472189d7925941ce5d2 395 Gene3D G3DSA:3.90.1150.10 36 384 8.0E-131 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 PhaeoP54_03369 dc99507818540472189d7925941ce5d2 395 SUPERFAMILY SSF53383 5 392 8.81E-118 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PhaeoP54_03369 dc99507818540472189d7925941ce5d2 395 Pfam PF00155 Aminotransferase class I and II 43 383 4.7E-67 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 PhaeoP54_03369 dc99507818540472189d7925941ce5d2 395 Hamap MF_00985 2-amino-3-ketobutyrate coenzyme A ligase [kbl]. 2 392 52.159 T 14-10-2018 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase GO:0006567|GO:0008890 KEGG: 00260+2.3.1.29|Reactome: R-HSA-8849175 PhaeoP54_03802 87d64ba90eb8415b65a1baee80a948ea 551 SUPERFAMILY SSF52518 373 544 2.32E-44 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold PhaeoP54_03802 87d64ba90eb8415b65a1baee80a948ea 551 Gene3D G3DSA:3.40.50.1220 197 361 3.3E-30 T 14-10-2018 PhaeoP54_03802 87d64ba90eb8415b65a1baee80a948ea 551 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 204 333 1.8E-22 T 14-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 PhaeoP54_03802 87d64ba90eb8415b65a1baee80a948ea 551 Gene3D G3DSA:3.40.50.970 2 195 2.7E-54 T 14-10-2018 PhaeoP54_03802 87d64ba90eb8415b65a1baee80a948ea 551 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 10 176 3.5E-48 T 14-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 PhaeoP54_03802 87d64ba90eb8415b65a1baee80a948ea 551 SUPERFAMILY SSF52467 166 345 4.36E-27 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily PhaeoP54_03802 87d64ba90eb8415b65a1baee80a948ea 551 SUPERFAMILY SSF52518 9 177 9.26E-46 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold PhaeoP54_03802 87d64ba90eb8415b65a1baee80a948ea 551 Gene3D G3DSA:3.40.50.970 366 549 4.0E-44 T 14-10-2018 PhaeoP54_03802 87d64ba90eb8415b65a1baee80a948ea 551 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 428 447 - T 14-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 PhaeoP54_03802 87d64ba90eb8415b65a1baee80a948ea 551 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 400 538 5.0E-34 T 14-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 PhaeoP54_01626 a051fa93965fec26ef9b6e5674771abd 221 Gene3D G3DSA:3.40.50.1820 1 220 1.4E-59 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold PhaeoP54_01626 a051fa93965fec26ef9b6e5674771abd 221 Pfam PF02230 Phospholipase/Carboxylesterase 16 216 2.2E-35 T 14-10-2018 IPR003140 Phospholipase/carboxylesterase/thioesterase GO:0016787 PhaeoP54_01626 a051fa93965fec26ef9b6e5674771abd 221 SUPERFAMILY SSF53474 10 219 2.34E-43 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold PhaeoP54_00733 3946dfc032976377619a4f38c2a84325 202 SUPERFAMILY SSF55729 6 195 3.39E-24 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase PhaeoP54_00733 3946dfc032976377619a4f38c2a84325 202 Pfam PF00765 Autoinducer synthase 19 195 7.5E-9 T 14-10-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 PhaeoP54_00733 3946dfc032976377619a4f38c2a84325 202 Gene3D G3DSA:3.40.630.30 9 197 2.9E-33 T 14-10-2018 PhaeoP54_02699 20e166dcdcc7f9b15ea0f02f612d8486 331 Pfam PF00005 ABC transporter 19 161 1.9E-35 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PhaeoP54_02699 20e166dcdcc7f9b15ea0f02f612d8486 331 Gene3D G3DSA:2.40.50.140 262 316 3.0E-7 T 14-10-2018 PhaeoP54_02699 20e166dcdcc7f9b15ea0f02f612d8486 331 Gene3D G3DSA:2.40.50.940 222 249 1.4E-11 T 14-10-2018 PhaeoP54_02699 20e166dcdcc7f9b15ea0f02f612d8486 331 SUPERFAMILY SSF52540 4 242 3.7E-86 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_02699 20e166dcdcc7f9b15ea0f02f612d8486 331 Gene3D G3DSA:2.40.50.940 254 325 3.0E-7 T 14-10-2018 PhaeoP54_02699 20e166dcdcc7f9b15ea0f02f612d8486 331 Pfam PF08402 TOBE domain 255 323 1.9E-8 T 14-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 PhaeoP54_02699 20e166dcdcc7f9b15ea0f02f612d8486 331 Gene3D G3DSA:3.40.50.300 3 221 3.5E-68 T 14-10-2018 PhaeoP54_02699 20e166dcdcc7f9b15ea0f02f612d8486 331 SUPERFAMILY SSF50331 237 331 1.67E-19 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal PhaeoP54_02699 20e166dcdcc7f9b15ea0f02f612d8486 331 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PhaeoP54_02699 20e166dcdcc7f9b15ea0f02f612d8486 331 SMART SM00382 28 211 6.1E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_02723 b32e25906e040acb7285f83dfb169289 317 Pfam PF00248 Aldo/keto reductase family 16 301 2.2E-63 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain PhaeoP54_02723 b32e25906e040acb7285f83dfb169289 317 Gene3D G3DSA:3.20.20.100 1 316 3.3E-86 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily PhaeoP54_02723 b32e25906e040acb7285f83dfb169289 317 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 127 144 - T 14-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 PhaeoP54_02723 b32e25906e040acb7285f83dfb169289 317 SUPERFAMILY SSF51430 9 303 4.19E-80 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily PhaeoP54_01689 b48a5c3a8b29ac5be16045aa112ecf68 342 SUPERFAMILY SSF51735 3 172 2.33E-51 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PhaeoP54_01689 b48a5c3a8b29ac5be16045aa112ecf68 342 Gene3D G3DSA:3.30.360.10 147 310 3.8E-118 T 14-10-2018 PhaeoP54_01689 b48a5c3a8b29ac5be16045aa112ecf68 342 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 158 313 8.8E-18 T 14-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 PhaeoP54_01689 b48a5c3a8b29ac5be16045aa112ecf68 342 Gene3D G3DSA:3.40.50.720 4 328 3.8E-118 T 14-10-2018 PhaeoP54_01689 b48a5c3a8b29ac5be16045aa112ecf68 342 SMART SM00859 4 141 1.2E-50 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 PhaeoP54_01689 b48a5c3a8b29ac5be16045aa112ecf68 342 SUPERFAMILY SSF55347 149 310 2.34E-46 T 14-10-2018 PhaeoP54_01689 b48a5c3a8b29ac5be16045aa112ecf68 342 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 4 342 3.1E-114 T 14-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 PhaeoP54_01689 b48a5c3a8b29ac5be16045aa112ecf68 342 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 4 141 1.5E-29 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 PhaeoP54_01689 b48a5c3a8b29ac5be16045aa112ecf68 342 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 3 336 39.027 T 14-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 PhaeoP54_00599 73286d087eeb9dd4df413f5df37277a8 195 Hamap MF_00155 Cytochrome c oxidase assembly protein CtaG [ctaG]. 1 178 42.504 T 14-10-2018 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PhaeoP54_00599 73286d087eeb9dd4df413f5df37277a8 195 Pfam PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 27 172 1.5E-56 T 14-10-2018 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PhaeoP54_00599 73286d087eeb9dd4df413f5df37277a8 195 Gene3D G3DSA:2.60.370.10 47 186 1.6E-56 T 14-10-2018 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PhaeoP54_00599 73286d087eeb9dd4df413f5df37277a8 195 SUPERFAMILY SSF110111 49 174 1.31E-52 T 14-10-2018 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PhaeoP54_00599 73286d087eeb9dd4df413f5df37277a8 195 PIRSF PIRSF005413 3 188 3.0E-69 T 14-10-2018 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PhaeoP54_01826 5a48bc803bd2908b2b998f634e3d7ecd 117 Pfam PF04430 Protein of unknown function (DUF498/DUF598) 14 113 3.9E-26 T 14-10-2018 IPR007523 NDUFAF3/Mth938 domain-containing protein PhaeoP54_01826 5a48bc803bd2908b2b998f634e3d7ecd 117 Gene3D G3DSA:3.40.1230.10 1 117 1.4E-27 T 14-10-2018 IPR036748 MTH938-like superfamily PhaeoP54_01826 5a48bc803bd2908b2b998f634e3d7ecd 117 SUPERFAMILY SSF64076 1 115 3.01E-36 T 14-10-2018 IPR036748 MTH938-like superfamily PhaeoP54_00431 958e48dcb4ffea8832bea363eab4e8f4 324 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 15 308 7.1E-69 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme PhaeoP54_00431 958e48dcb4ffea8832bea363eab4e8f4 324 SUPERFAMILY SSF53686 4 316 5.5E-84 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme PhaeoP54_00431 958e48dcb4ffea8832bea363eab4e8f4 324 Gene3D G3DSA:3.40.50.1100 13 312 1.3E-98 T 14-10-2018 PhaeoP54_00431 958e48dcb4ffea8832bea363eab4e8f4 324 Gene3D G3DSA:3.40.50.1100 50 146 1.3E-98 T 14-10-2018 PhaeoP54_00431 958e48dcb4ffea8832bea363eab4e8f4 324 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 42 55 - T 14-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 PhaeoP54_01596 7dab1063cf39c19441899208cadba3d4 149 SUPERFAMILY SSF81324 38 134 2.75E-12 T 14-10-2018 PhaeoP54_01596 7dab1063cf39c19441899208cadba3d4 149 Gene3D G3DSA:1.10.287.70 40 137 1.6E-10 T 14-10-2018 PhaeoP54_01596 7dab1063cf39c19441899208cadba3d4 149 Pfam PF07885 Ion channel 67 135 9.9E-10 T 14-10-2018 IPR013099 Potassium channel domain PhaeoP54_00759 15616462a488d1ba310436d14269eb0a 325 PIRSF PIRSF017082 1 325 6.4E-86 T 14-10-2018 IPR005064 Bordetella uptake gene GO:0030288 PhaeoP54_00759 15616462a488d1ba310436d14269eb0a 325 Gene3D G3DSA:3.40.190.10 126 252 6.9E-64 T 14-10-2018 PhaeoP54_00759 15616462a488d1ba310436d14269eb0a 325 SUPERFAMILY SSF53850 64 281 5.57E-12 T 14-10-2018 PhaeoP54_00759 15616462a488d1ba310436d14269eb0a 325 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 68 323 8.3E-26 T 14-10-2018 IPR005064 Bordetella uptake gene GO:0030288 PhaeoP54_00759 15616462a488d1ba310436d14269eb0a 325 Gene3D G3DSA:3.40.190.150 33 315 6.9E-64 T 14-10-2018 PhaeoP54_02838 fcad08d5d01fafdd94d2deb641cb1728 283 Pfam PF00581 Rhodanese-like domain 166 271 2.1E-10 T 14-10-2018 IPR001763 Rhodanese-like domain PhaeoP54_02838 fcad08d5d01fafdd94d2deb641cb1728 283 Pfam PF00581 Rhodanese-like domain 9 128 2.7E-16 T 14-10-2018 IPR001763 Rhodanese-like domain PhaeoP54_02838 fcad08d5d01fafdd94d2deb641cb1728 283 Gene3D G3DSA:3.40.250.10 151 274 1.2E-40 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily PhaeoP54_02838 fcad08d5d01fafdd94d2deb641cb1728 283 SUPERFAMILY SSF52821 4 153 4.06E-45 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily PhaeoP54_02838 fcad08d5d01fafdd94d2deb641cb1728 283 SMART SM00450 155 276 1.6E-15 T 14-10-2018 IPR001763 Rhodanese-like domain PhaeoP54_02838 fcad08d5d01fafdd94d2deb641cb1728 283 SMART SM00450 8 132 2.1E-25 T 14-10-2018 IPR001763 Rhodanese-like domain PhaeoP54_02838 fcad08d5d01fafdd94d2deb641cb1728 283 ProSitePatterns PS00380 Rhodanese signature 1. 42 53 - T 14-10-2018 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350|MetaCyc: PWY-7927|Reactome: R-HSA-1614558 PhaeoP54_02838 fcad08d5d01fafdd94d2deb641cb1728 283 SUPERFAMILY SSF52821 163 282 1.1E-34 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily PhaeoP54_02838 fcad08d5d01fafdd94d2deb641cb1728 283 Gene3D G3DSA:3.40.250.10 4 145 1.1E-49 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily PhaeoP54_03530 b1d1695acd39807a971ba7d328a46407 295 SUPERFAMILY SSF56112 12 270 5.9E-33 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily PhaeoP54_03530 b1d1695acd39807a971ba7d328a46407 295 Pfam PF01636 Phosphotransferase enzyme family 37 224 1.0E-16 T 14-10-2018 IPR002575 Aminoglycoside phosphotransferase PhaeoP54_03530 b1d1695acd39807a971ba7d328a46407 295 Gene3D G3DSA:3.90.1200.10 111 294 2.7E-12 T 14-10-2018 PhaeoP54_00048 c8e424c205a140e0238a28f5d2ce82dd 284 SUPERFAMILY SSF56529 60 280 1.2E-64 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 PhaeoP54_00048 c8e424c205a140e0238a28f5d2ce82dd 284 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 73 279 9.1E-55 T 14-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 PhaeoP54_00048 c8e424c205a140e0238a28f5d2ce82dd 284 Gene3D G3DSA:3.90.850.10 67 284 1.5E-68 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 PhaeoP54_00018 18133cd676b57836155ce67a65fedb51 436 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 11 426 2.9E-80 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit PhaeoP54_00018 18133cd676b57836155ce67a65fedb51 436 PIRSF PIRSF006066 5 436 5.4E-89 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 PhaeoP54_00018 18133cd676b57836155ce67a65fedb51 436 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 21 431 9.3E-106 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 PhaeoP54_00196 b016234d27da6220351ed040248d215c 159 Pfam PF00665 Integrase core domain 80 157 9.4E-20 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 PhaeoP54_00196 b016234d27da6220351ed040248d215c 159 Pfam PF13276 HTH-like domain 16 56 6.8E-9 T 14-10-2018 IPR025948 HTH-like domain PhaeoP54_00196 b016234d27da6220351ed040248d215c 159 Gene3D G3DSA:3.30.420.10 72 158 3.6E-10 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 PhaeoP54_00196 b016234d27da6220351ed040248d215c 159 SUPERFAMILY SSF53098 73 157 7.89E-23 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily PhaeoP54_02109 570d77e6b40ec7228bfb104be5591c55 237 Gene3D G3DSA:3.40.80.10 9 164 1.1E-49 T 14-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 PhaeoP54_02109 570d77e6b40ec7228bfb104be5591c55 237 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 30 153 1.6E-30 T 14-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 PhaeoP54_02109 570d77e6b40ec7228bfb104be5591c55 237 SMART SM00644 19 152 5.8E-35 T 14-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 PhaeoP54_02109 570d77e6b40ec7228bfb104be5591c55 237 SUPERFAMILY SSF55846 12 166 1.18E-52 T 14-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 PhaeoP54_03865 1ae29990b38a5d2638a85c7c5df67654 92 Pfam PF05101 Type IV secretory pathway, VirB3-like protein 4 86 1.3E-21 T 14-10-2018 IPR007792 Type IV secretion system, VirB3 / TrbD / AvhB PhaeoP54_03034 8d8758918af57e7201eb95964ca90792 98 SUPERFAMILY SSF54189 6 94 1.51E-32 T 14-10-2018 IPR012678 Ribosomal protein L23/L15e core domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 PhaeoP54_03034 8d8758918af57e7201eb95964ca90792 98 Pfam PF00276 Ribosomal protein L23 9 94 6.6E-32 T 14-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 PhaeoP54_03034 8d8758918af57e7201eb95964ca90792 98 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 8 97 21.357 T 14-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 PhaeoP54_03034 8d8758918af57e7201eb95964ca90792 98 Gene3D G3DSA:3.30.70.330 1 97 4.6E-33 T 14-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily PhaeoP54_03374 48081e26ae5bf90fdfffe05705474942 368 Gene3D G3DSA:3.40.190.10 141 353 5.8E-106 T 14-10-2018 PhaeoP54_03374 48081e26ae5bf90fdfffe05705474942 368 SUPERFAMILY SSF53850 28 366 1.32E-46 T 14-10-2018 PhaeoP54_03374 48081e26ae5bf90fdfffe05705474942 368 Pfam PF13416 Bacterial extracellular solute-binding protein 46 316 6.9E-39 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein PhaeoP54_03374 48081e26ae5bf90fdfffe05705474942 368 Gene3D G3DSA:3.40.190.10 31 346 5.8E-106 T 14-10-2018 PhaeoP54_01036 3e53ff924ccfb6446ea44d7501890dd4 259 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 17 255 1.6E-36 T 14-10-2018 PhaeoP54_01036 3e53ff924ccfb6446ea44d7501890dd4 259 Gene3D G3DSA:3.40.50.720 1 257 9.5E-58 T 14-10-2018 PhaeoP54_01036 3e53ff924ccfb6446ea44d7501890dd4 259 SUPERFAMILY SSF51735 7 256 2.64E-56 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PhaeoP54_01036 3e53ff924ccfb6446ea44d7501890dd4 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 218 238 3.1E-21 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_01036 3e53ff924ccfb6446ea44d7501890dd4 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 3.1E-21 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_01036 3e53ff924ccfb6446ea44d7501890dd4 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 3.1E-21 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_01036 3e53ff924ccfb6446ea44d7501890dd4 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 3.1E-21 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_01036 3e53ff924ccfb6446ea44d7501890dd4 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 3.1E-21 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_01036 3e53ff924ccfb6446ea44d7501890dd4 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 3.1E-21 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_01924 d203711619d2b2089612bfbb351bf816 143 Pfam PF06271 RDD family 18 134 8.4E-13 T 14-10-2018 IPR010432 RDD PhaeoP54_00489 85405a2973620784a133e11a9d85cbc1 265 SUPERFAMILY SSF161098 6 264 4.71E-56 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_00489 85405a2973620784a133e11a9d85cbc1 265 Gene3D G3DSA:1.10.3720.10 4 258 1.4E-47 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_00489 85405a2973620784a133e11a9d85cbc1 265 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 80 259 2.0E-11 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PhaeoP54_00580 ccb453ba8bce140cb0a0636a6abb9b04 326 Pfam PF00482 Type II secretion system (T2SS), protein F 183 311 1.7E-21 T 14-10-2018 IPR018076 Type II secretion system F domain PhaeoP54_01878 b5cbee4827b98bc15cb43de614d4a857 193 Pfam PF13975 gag-polyprotein putative aspartyl protease 88 178 1.1E-25 T 14-10-2018 PhaeoP54_01878 b5cbee4827b98bc15cb43de614d4a857 193 TIGRFAM TIGR02281 clan_AA_DTGA: clan AA aspartic protease, TIGR02281 family 75 192 1.9E-34 T 14-10-2018 IPR011969 Clan AA aspartic peptidase, C-terminal PhaeoP54_01878 b5cbee4827b98bc15cb43de614d4a857 193 Gene3D G3DSA:2.40.70.10 68 192 1.2E-36 T 14-10-2018 IPR021109 Aspartic peptidase domain superfamily PhaeoP54_01878 b5cbee4827b98bc15cb43de614d4a857 193 ProSitePatterns PS00141 Eukaryotic and viral aspartyl proteases active site. 98 109 - T 14-10-2018 IPR001969 Aspartic peptidase, active site GO:0004190|GO:0006508 PhaeoP54_01878 b5cbee4827b98bc15cb43de614d4a857 193 SUPERFAMILY SSF50630 78 180 3.11E-20 T 14-10-2018 IPR021109 Aspartic peptidase domain superfamily PhaeoP54_01057 1c7c5b7816514b2f3cf71639ace8b087 454 PRINTS PR01874 DNA repair protein radA signature 121 138 2.0E-88 T 14-10-2018 PhaeoP54_01057 1c7c5b7816514b2f3cf71639ace8b087 454 PRINTS PR01874 DNA repair protein radA signature 8 32 2.0E-88 T 14-10-2018 PhaeoP54_01057 1c7c5b7816514b2f3cf71639ace8b087 454 PRINTS PR01874 DNA repair protein radA signature 79 107 2.0E-88 T 14-10-2018 PhaeoP54_01057 1c7c5b7816514b2f3cf71639ace8b087 454 PRINTS PR01874 DNA repair protein radA signature 210 238 2.0E-88 T 14-10-2018 PhaeoP54_01057 1c7c5b7816514b2f3cf71639ace8b087 454 PRINTS PR01874 DNA repair protein radA signature 171 195 2.0E-88 T 14-10-2018 PhaeoP54_01057 1c7c5b7816514b2f3cf71639ace8b087 454 PRINTS PR01874 DNA repair protein radA signature 319 342 2.0E-88 T 14-10-2018 PhaeoP54_01057 1c7c5b7816514b2f3cf71639ace8b087 454 PRINTS PR01874 DNA repair protein radA signature 245 271 2.0E-88 T 14-10-2018 PhaeoP54_01057 1c7c5b7816514b2f3cf71639ace8b087 454 Pfam PF13541 Subunit ChlI of Mg-chelatase 343 425 2.0E-8 T 14-10-2018 PhaeoP54_01057 1c7c5b7816514b2f3cf71639ace8b087 454 SMART SM00382 87 241 1.4E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_01057 1c7c5b7816514b2f3cf71639ace8b087 454 Pfam PF13481 AAA domain 82 219 2.4E-13 T 14-10-2018 PhaeoP54_01057 1c7c5b7816514b2f3cf71639ace8b087 454 SUPERFAMILY SSF52540 66 290 1.17E-49 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_01057 1c7c5b7816514b2f3cf71639ace8b087 454 SUPERFAMILY SSF54211 252 442 3.19E-34 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold PhaeoP54_01057 1c7c5b7816514b2f3cf71639ace8b087 454 Gene3D G3DSA:3.30.230.10 327 444 6.1E-11 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PhaeoP54_01057 1c7c5b7816514b2f3cf71639ace8b087 454 Hamap MF_01498 DNA repair protein RadA [radA]. 19 451 43.034 T 14-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 PhaeoP54_01057 1c7c5b7816514b2f3cf71639ace8b087 454 Gene3D G3DSA:3.40.50.300 63 277 6.0E-40 T 14-10-2018 PhaeoP54_01057 1c7c5b7816514b2f3cf71639ace8b087 454 TIGRFAM TIGR00416 sms: DNA repair protein RadA 2 440 1.4E-169 T 14-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 PhaeoP54_03100 741ece314c1eb491f1373cafee37b0c7 205 PIRSF PIRSF006324 2 205 1.9E-45 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 PhaeoP54_03100 741ece314c1eb491f1373cafee37b0c7 205 Pfam PF01810 LysE type translocator 12 203 1.8E-31 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 PhaeoP54_03488 0060a4a0edf57297c0d2f6399a1fb4af 244 Pfam PF02602 Uroporphyrinogen-III synthase HemD 26 223 3.3E-18 T 14-10-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 PhaeoP54_03488 0060a4a0edf57297c0d2f6399a1fb4af 244 Gene3D G3DSA:3.40.50.10090 36 154 1.3E-14 T 14-10-2018 PhaeoP54_03488 0060a4a0edf57297c0d2f6399a1fb4af 244 Gene3D G3DSA:3.40.50.10090 5 223 1.3E-14 T 14-10-2018 PhaeoP54_03488 0060a4a0edf57297c0d2f6399a1fb4af 244 SUPERFAMILY SSF69618 3 228 1.18E-25 T 14-10-2018 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 PhaeoP54_03780 6650b98d4b4a2ae794c0d2ce02cb7b9b 287 SMART SM00138 18 281 6.6E-103 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 PhaeoP54_03780 6650b98d4b4a2ae794c0d2ce02cb7b9b 287 SUPERFAMILY SSF53335 86 264 1.17E-47 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PhaeoP54_03780 6650b98d4b4a2ae794c0d2ce02cb7b9b 287 Pfam PF01739 CheR methyltransferase, SAM binding domain 86 276 2.8E-64 T 14-10-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal PhaeoP54_03780 6650b98d4b4a2ae794c0d2ce02cb7b9b 287 PRINTS PR00996 Glutamate methyltransferase family signature 154 170 9.0E-44 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 PhaeoP54_03780 6650b98d4b4a2ae794c0d2ce02cb7b9b 287 PRINTS PR00996 Glutamate methyltransferase family signature 119 139 9.0E-44 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 PhaeoP54_03780 6650b98d4b4a2ae794c0d2ce02cb7b9b 287 PRINTS PR00996 Glutamate methyltransferase family signature 79 91 9.0E-44 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 PhaeoP54_03780 6650b98d4b4a2ae794c0d2ce02cb7b9b 287 PRINTS PR00996 Glutamate methyltransferase family signature 40 53 9.0E-44 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 PhaeoP54_03780 6650b98d4b4a2ae794c0d2ce02cb7b9b 287 PRINTS PR00996 Glutamate methyltransferase family signature 220 234 9.0E-44 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 PhaeoP54_03780 6650b98d4b4a2ae794c0d2ce02cb7b9b 287 PRINTS PR00996 Glutamate methyltransferase family signature 239 262 9.0E-44 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 PhaeoP54_03780 6650b98d4b4a2ae794c0d2ce02cb7b9b 287 PIRSF PIRSF000410 3 282 1.6E-102 T 14-10-2018 IPR026024 Chemotaxis protein methyltransferase CheR PhaeoP54_03780 6650b98d4b4a2ae794c0d2ce02cb7b9b 287 Pfam PF03705 CheR methyltransferase, all-alpha domain 19 67 1.5E-13 T 14-10-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal PhaeoP54_03780 6650b98d4b4a2ae794c0d2ce02cb7b9b 287 Gene3D G3DSA:1.10.155.10 7 84 1.3E-19 T 14-10-2018 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily PhaeoP54_03780 6650b98d4b4a2ae794c0d2ce02cb7b9b 287 Gene3D G3DSA:3.40.50.150 85 279 1.6E-59 T 14-10-2018 PhaeoP54_03780 6650b98d4b4a2ae794c0d2ce02cb7b9b 287 SUPERFAMILY SSF47757 10 85 1.01E-17 T 14-10-2018 PhaeoP54_03079 61182e75f2b175c201035be3bd4e5107 107 Gene3D G3DSA:3.40.50.300 1 83 1.3E-11 T 14-10-2018 PhaeoP54_03079 61182e75f2b175c201035be3bd4e5107 107 SUPERFAMILY SSF53795 3 76 2.47E-5 T 14-10-2018 PhaeoP54_04064 8acb97b244eac8ac16fa095bdf06ea81 315 Gene3D G3DSA:3.40.50.720 10 282 1.1E-28 T 14-10-2018 PhaeoP54_04064 8acb97b244eac8ac16fa095bdf06ea81 315 SUPERFAMILY SSF51735 11 277 1.87E-31 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PhaeoP54_04064 8acb97b244eac8ac16fa095bdf06ea81 315 Pfam PF01370 NAD dependent epimerase/dehydratase family 11 182 8.5E-15 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 PhaeoP54_00352 2aeaeee60a8e9d59e30943720f6e5514 291 Pfam PF09347 Domain of unknown function (DUF1989) 57 236 1.5E-57 T 14-10-2018 IPR018959 Protein of unknown function DUF1989 PhaeoP54_04047 c65a2d88f40de9a85cfd9fa67dce3c68 339 SUPERFAMILY SSF52540 6 229 4.96E-11 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_04047 c65a2d88f40de9a85cfd9fa67dce3c68 339 Gene3D G3DSA:3.40.50.300 5 190 1.3E-6 T 14-10-2018 PhaeoP54_00782 b3bf7f8b72a4837fe8d59d857ac52304 209 SUPERFAMILY SSF63965 3 207 5.89E-71 T 14-10-2018 IPR036588 Precorrin-8X methylmutase CobH/CbiC superfamily GO:0009236|GO:0016993 PhaeoP54_00782 b3bf7f8b72a4837fe8d59d857ac52304 209 Gene3D G3DSA:3.40.50.10230 2 209 5.0E-80 T 14-10-2018 IPR036588 Precorrin-8X methylmutase CobH/CbiC superfamily GO:0009236|GO:0016993 PhaeoP54_00782 b3bf7f8b72a4837fe8d59d857ac52304 209 Pfam PF02570 Precorrin-8X methylmutase 12 206 7.1E-71 T 14-10-2018 IPR003722 Cobalamin biosynthesis precorrin-8X methylmutase CobH/CbiC GO:0009236|GO:0016993 PhaeoP54_02423 63aa99c3610cb31d6d41027edb5ea71e 290 Gene3D G3DSA:1.20.58.1490 1 69 1.6E-10 T 14-10-2018 IPR038414 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal domain superfamily PhaeoP54_02423 63aa99c3610cb31d6d41027edb5ea71e 290 PRINTS PR00605 Class IC cytochrome C signature 259 281 7.7E-8 T 14-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 PhaeoP54_02423 63aa99c3610cb31d6d41027edb5ea71e 290 PRINTS PR00605 Class IC cytochrome C signature 215 226 7.7E-8 T 14-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 PhaeoP54_02423 63aa99c3610cb31d6d41027edb5ea71e 290 PIRSF PIRSF000006 1 288 1.9E-82 T 14-10-2018 IPR004678 Cytochrome c oxidase cbb3-type, subunit III PhaeoP54_02423 63aa99c3610cb31d6d41027edb5ea71e 290 TIGRFAM TIGR00782 ccoP: cytochrome c oxidase, cbb3-type, subunit III 11 281 4.4E-78 T 14-10-2018 IPR004678 Cytochrome c oxidase cbb3-type, subunit III PhaeoP54_02423 63aa99c3610cb31d6d41027edb5ea71e 290 Gene3D G3DSA:1.10.760.10 81 281 3.0E-59 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PhaeoP54_02423 63aa99c3610cb31d6d41027edb5ea71e 290 SUPERFAMILY SSF46626 35 202 8.72E-19 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PhaeoP54_02423 63aa99c3610cb31d6d41027edb5ea71e 290 Gene3D G3DSA:1.10.760.10 172 261 3.0E-59 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PhaeoP54_02423 63aa99c3610cb31d6d41027edb5ea71e 290 Pfam PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP 13 56 5.0E-15 T 14-10-2018 IPR032858 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal PhaeoP54_02423 63aa99c3610cb31d6d41027edb5ea71e 290 SUPERFAMILY SSF46626 201 285 6.07E-24 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PhaeoP54_02423 63aa99c3610cb31d6d41027edb5ea71e 290 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 205 281 1.9E-13 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PhaeoP54_02423 63aa99c3610cb31d6d41027edb5ea71e 290 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 113 192 7.7E-7 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PhaeoP54_03569 4914d391e8883c5f37a84960380dc5a9 275 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 136 170 0.0011 T 14-10-2018 IPR001451 Hexapeptide repeat PhaeoP54_03569 4914d391e8883c5f37a84960380dc5a9 275 TIGRFAM TIGR00965 dapD: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 6 274 7.8E-127 T 14-10-2018 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117 PhaeoP54_03569 4914d391e8883c5f37a84960380dc5a9 275 Hamap MF_00811 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [dapD]. 3 275 55.347 T 14-10-2018 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117 PhaeoP54_03569 4914d391e8883c5f37a84960380dc5a9 275 SUPERFAMILY SSF51161 5 259 5.96E-66 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily PhaeoP54_03569 4914d391e8883c5f37a84960380dc5a9 275 Pfam PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal 5 71 4.1E-25 T 14-10-2018 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117 PhaeoP54_03569 4914d391e8883c5f37a84960380dc5a9 275 Gene3D G3DSA:2.160.10.10 91 260 1.8E-53 T 14-10-2018 PhaeoP54_03569 4914d391e8883c5f37a84960380dc5a9 275 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 138 166 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 PhaeoP54_03569 4914d391e8883c5f37a84960380dc5a9 275 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 179 213 6.5E-11 T 14-10-2018 IPR001451 Hexapeptide repeat PhaeoP54_03569 4914d391e8883c5f37a84960380dc5a9 275 Gene3D G3DSA:1.10.166.10 3 72 2.4E-28 T 14-10-2018 IPR037133 Tetrahydrodipicolinate-N-succinyltransferase, N-terminal domain superfamily KEGG: 00300+2.3.1.117 PhaeoP54_03108 24d1cc77ac9d4953044cd3535d8ea7e4 169 Pfam PF01327 Polypeptide deformylase 5 152 2.0E-46 T 14-10-2018 IPR023635 Peptide deformylase PhaeoP54_03108 24d1cc77ac9d4953044cd3535d8ea7e4 169 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 7 155 9.1E-40 T 14-10-2018 IPR023635 Peptide deformylase PhaeoP54_03108 24d1cc77ac9d4953044cd3535d8ea7e4 169 SUPERFAMILY SSF56420 2 162 2.49E-52 T 14-10-2018 IPR036821 Peptide deformylase superfamily PhaeoP54_03108 24d1cc77ac9d4953044cd3535d8ea7e4 169 PRINTS PR01576 Peptide deformylase signature 122 151 2.2E-28 T 14-10-2018 IPR023635 Peptide deformylase PhaeoP54_03108 24d1cc77ac9d4953044cd3535d8ea7e4 169 PRINTS PR01576 Peptide deformylase signature 32 61 2.2E-28 T 14-10-2018 IPR023635 Peptide deformylase PhaeoP54_03108 24d1cc77ac9d4953044cd3535d8ea7e4 169 PRINTS PR01576 Peptide deformylase signature 91 102 2.2E-28 T 14-10-2018 IPR023635 Peptide deformylase PhaeoP54_03108 24d1cc77ac9d4953044cd3535d8ea7e4 169 PRINTS PR01576 Peptide deformylase signature 103 121 2.2E-28 T 14-10-2018 IPR023635 Peptide deformylase PhaeoP54_03108 24d1cc77ac9d4953044cd3535d8ea7e4 169 PIRSF PIRSF004749 1 168 2.0E-47 T 14-10-2018 IPR023635 Peptide deformylase PhaeoP54_03108 24d1cc77ac9d4953044cd3535d8ea7e4 169 Hamap MF_00163 Peptide deformylase [def]. 2 164 25.758 T 14-10-2018 IPR023635 Peptide deformylase PhaeoP54_03108 24d1cc77ac9d4953044cd3535d8ea7e4 169 Gene3D G3DSA:3.90.45.10 1 168 2.2E-51 T 14-10-2018 IPR036821 Peptide deformylase superfamily PhaeoP54_02045 b46ded25584bc1daf57d8542d06fc93d 202 Gene3D G3DSA:1.20.1290.10 62 185 7.4E-31 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 PhaeoP54_02045 b46ded25584bc1daf57d8542d06fc93d 202 SUPERFAMILY SSF69118 1 180 8.2E-44 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 PhaeoP54_02045 b46ded25584bc1daf57d8542d06fc93d 202 TIGRFAM TIGR01926 peroxid_rel: uncharacterized peroxidase-related enzyme 3 180 8.3E-31 T 14-10-2018 IPR010195 Uncharacterised peroxidase-related PhaeoP54_02045 b46ded25584bc1daf57d8542d06fc93d 202 Pfam PF02627 Carboxymuconolactone decarboxylase family 41 91 1.1E-4 T 14-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 PhaeoP54_03342 a61d952e2bbc549461d2790d7ab9f8e5 368 SUPERFAMILY SSF103263 4 358 1.31E-140 T 14-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 PhaeoP54_03342 a61d952e2bbc549461d2790d7ab9f8e5 368 Hamap MF_00300 Chorismate synthase [aroC]. 10 360 35.327 T 14-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 PhaeoP54_03342 a61d952e2bbc549461d2790d7ab9f8e5 368 Gene3D G3DSA:3.60.150.10 1 366 3.2E-140 T 14-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 PhaeoP54_03342 a61d952e2bbc549461d2790d7ab9f8e5 368 PIRSF PIRSF001456 3 366 3.3E-135 T 14-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 PhaeoP54_03342 a61d952e2bbc549461d2790d7ab9f8e5 368 ProSitePatterns PS00787 Chorismate synthase signature 1. 16 31 - T 14-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 PhaeoP54_03342 a61d952e2bbc549461d2790d7ab9f8e5 368 Pfam PF01264 Chorismate synthase 10 353 4.7E-133 T 14-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 PhaeoP54_03342 a61d952e2bbc549461d2790d7ab9f8e5 368 TIGRFAM TIGR00033 aroC: chorismate synthase 10 357 6.6E-131 T 14-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 PhaeoP54_03342 a61d952e2bbc549461d2790d7ab9f8e5 368 ProSitePatterns PS00789 Chorismate synthase signature 3. 327 343 - T 14-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 PhaeoP54_02679 3c0b7391de2e49193ffb17558647f042 241 Gene3D G3DSA:3.40.50.300 12 235 1.3E-52 T 14-10-2018 PhaeoP54_02679 3c0b7391de2e49193ffb17558647f042 241 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PhaeoP54_02679 3c0b7391de2e49193ffb17558647f042 241 SUPERFAMILY SSF52540 11 230 1.41E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_02679 3c0b7391de2e49193ffb17558647f042 241 Pfam PF00005 ABC transporter 28 164 8.5E-22 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PhaeoP54_02679 3c0b7391de2e49193ffb17558647f042 241 SMART SM00382 34 227 4.0E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_00152 665125a4c3ca5f6b59762a36311cea26 131 SUPERFAMILY SSF54427 4 126 9.2E-27 T 14-10-2018 IPR032710 NTF2-like domain superfamily PhaeoP54_00152 665125a4c3ca5f6b59762a36311cea26 131 Pfam PF12680 SnoaL-like domain 5 115 9.9E-17 T 14-10-2018 IPR037401 SnoaL-like domain PhaeoP54_00152 665125a4c3ca5f6b59762a36311cea26 131 TIGRFAM TIGR02096 TIGR02096: conserved hypothetical protein 4 130 8.4E-37 T 14-10-2018 IPR011721 Conserved hypothetical protein CHP02096 PhaeoP54_00152 665125a4c3ca5f6b59762a36311cea26 131 Gene3D G3DSA:3.10.450.50 1 130 1.6E-38 T 14-10-2018 PhaeoP54_01385 2f172bb0cb9ae50ebc50a6263f503456 436 SMART SM00116 221 270 17.0 T 14-10-2018 IPR000644 CBS domain PhaeoP54_01385 2f172bb0cb9ae50ebc50a6263f503456 436 SMART SM00116 294 342 0.042 T 14-10-2018 IPR000644 CBS domain PhaeoP54_01385 2f172bb0cb9ae50ebc50a6263f503456 436 Pfam PF01595 Domain of unknown function DUF21 18 196 2.4E-45 T 14-10-2018 IPR002550 CNNM, transmembrane domain PhaeoP54_01385 2f172bb0cb9ae50ebc50a6263f503456 436 SMART SM01091 358 436 2.5E-29 T 14-10-2018 IPR005170 Transporter-associated domain PhaeoP54_01385 2f172bb0cb9ae50ebc50a6263f503456 436 SUPERFAMILY SSF56176 357 435 1.25E-22 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 PhaeoP54_01385 2f172bb0cb9ae50ebc50a6263f503456 436 Pfam PF00571 CBS domain 212 269 0.0011 T 14-10-2018 IPR000644 CBS domain PhaeoP54_01385 2f172bb0cb9ae50ebc50a6263f503456 436 Pfam PF00571 CBS domain 292 342 1.6E-9 T 14-10-2018 IPR000644 CBS domain PhaeoP54_01385 2f172bb0cb9ae50ebc50a6263f503456 436 Gene3D G3DSA:3.10.580.10 193 357 3.0E-49 T 14-10-2018 PhaeoP54_01385 2f172bb0cb9ae50ebc50a6263f503456 436 SUPERFAMILY SSF54631 207 358 4.42E-33 T 14-10-2018 PhaeoP54_01385 2f172bb0cb9ae50ebc50a6263f503456 436 Pfam PF03471 Transporter associated domain 359 434 7.5E-21 T 14-10-2018 IPR005170 Transporter-associated domain PhaeoP54_01385 2f172bb0cb9ae50ebc50a6263f503456 436 Gene3D G3DSA:3.30.465.10 358 435 7.8E-26 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 PhaeoP54_03348 c4d798492dd44ab5daf4835f3f1cd20f 170 SMART SM00347 43 143 1.3E-15 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PhaeoP54_03348 c4d798492dd44ab5daf4835f3f1cd20f 170 Gene3D G3DSA:1.10.10.10 18 159 2.2E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_03348 c4d798492dd44ab5daf4835f3f1cd20f 170 SUPERFAMILY SSF46785 23 156 9.23E-28 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_03348 c4d798492dd44ab5daf4835f3f1cd20f 170 ProSitePatterns PS01117 MarR-type HTH domain signature. 82 116 - T 14-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site PhaeoP54_03348 c4d798492dd44ab5daf4835f3f1cd20f 170 Pfam PF12802 MarR family 52 107 8.9E-11 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PhaeoP54_02601 e8c0cb2093800344dea121ebb2e58896 169 Gene3D G3DSA:2.30.110.10 7 167 1.6E-38 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 PhaeoP54_02601 e8c0cb2093800344dea121ebb2e58896 169 SUPERFAMILY SSF50475 12 137 3.18E-24 T 14-10-2018 PhaeoP54_02601 e8c0cb2093800344dea121ebb2e58896 169 Pfam PF16242 Pyridoxamine 5'-phosphate oxidase like 10 153 4.5E-37 T 14-10-2018 IPR038725 General stress protein, FMN-binding split barrel domain PhaeoP54_02549 03eb17372c5a77a62ffa626414c8f52b 348 Pfam PF06723 MreB/Mbl protein 13 340 4.1E-143 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 PhaeoP54_02549 03eb17372c5a77a62ffa626414c8f52b 348 Gene3D G3DSA:3.90.640.10 189 264 1.2E-128 T 14-10-2018 PhaeoP54_02549 03eb17372c5a77a62ffa626414c8f52b 348 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 11 340 5.6E-148 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 PhaeoP54_02549 03eb17372c5a77a62ffa626414c8f52b 348 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 190 210 1.1E-54 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 PhaeoP54_02549 03eb17372c5a77a62ffa626414c8f52b 348 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 52 70 1.1E-54 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 PhaeoP54_02549 03eb17372c5a77a62ffa626414c8f52b 348 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 135 154 1.1E-54 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 PhaeoP54_02549 03eb17372c5a77a62ffa626414c8f52b 348 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 305 331 1.1E-54 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 PhaeoP54_02549 03eb17372c5a77a62ffa626414c8f52b 348 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 72 95 1.1E-54 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 PhaeoP54_02549 03eb17372c5a77a62ffa626414c8f52b 348 Gene3D G3DSA:3.30.420.40 157 322 1.2E-128 T 14-10-2018 PhaeoP54_02549 03eb17372c5a77a62ffa626414c8f52b 348 SUPERFAMILY SSF53067 153 334 1.94E-45 T 14-10-2018 PhaeoP54_02549 03eb17372c5a77a62ffa626414c8f52b 348 Gene3D G3DSA:3.30.420.40 15 332 1.2E-128 T 14-10-2018 PhaeoP54_02549 03eb17372c5a77a62ffa626414c8f52b 348 SUPERFAMILY SSF53067 12 151 1.14E-35 T 14-10-2018 PhaeoP54_00268 150ff503cd27ba1b56680fc7dc39966e 302 SUPERFAMILY SSF55729 154 283 1.03E-14 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase PhaeoP54_00268 150ff503cd27ba1b56680fc7dc39966e 302 Gene3D G3DSA:3.40.630.30 67 284 1.5E-18 T 14-10-2018 PhaeoP54_00268 150ff503cd27ba1b56680fc7dc39966e 302 Pfam PF00583 Acetyltransferase (GNAT) family 204 276 2.0E-4 T 14-10-2018 IPR000182 GNAT domain PhaeoP54_01621 f1f59ccdbe8a2be1bf78e1653d9fdacf 308 TIGRFAM TIGR01229 rocF_arginase: arginase 8 298 4.1E-86 T 14-10-2018 IPR014033 Arginase GO:0004053|GO:0006525|GO:0046872 KEGG: 00220+3.5.3.1|KEGG: 00330+3.5.3.1|MetaCyc: PWY-31|MetaCyc: PWY-4984|MetaCyc: PWY-6305|MetaCyc: PWY-6922|Reactome: R-HSA-70635 PhaeoP54_01621 f1f59ccdbe8a2be1bf78e1653d9fdacf 308 PRINTS PR00116 Arginase signature 173 191 1.4E-47 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 PhaeoP54_01621 f1f59ccdbe8a2be1bf78e1653d9fdacf 308 PRINTS PR00116 Arginase signature 94 109 1.4E-47 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 PhaeoP54_01621 f1f59ccdbe8a2be1bf78e1653d9fdacf 308 PRINTS PR00116 Arginase signature 121 148 1.4E-47 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 PhaeoP54_01621 f1f59ccdbe8a2be1bf78e1653d9fdacf 308 PRINTS PR00116 Arginase signature 257 271 1.4E-47 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 PhaeoP54_01621 f1f59ccdbe8a2be1bf78e1653d9fdacf 308 PRINTS PR00116 Arginase signature 222 251 1.4E-47 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 PhaeoP54_01621 f1f59ccdbe8a2be1bf78e1653d9fdacf 308 PIRSF PIRSF036979 1 299 8.3E-27 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 PhaeoP54_01621 f1f59ccdbe8a2be1bf78e1653d9fdacf 308 Pfam PF00491 Arginase family 5 295 4.1E-69 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 PhaeoP54_01621 f1f59ccdbe8a2be1bf78e1653d9fdacf 308 SUPERFAMILY SSF52768 5 307 1.98E-82 T 14-10-2018 IPR023696 Ureohydrolase domain superfamily PhaeoP54_01621 f1f59ccdbe8a2be1bf78e1653d9fdacf 308 ProSitePatterns PS01053 Arginase family signature. 225 246 - T 14-10-2018 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 PhaeoP54_01621 f1f59ccdbe8a2be1bf78e1653d9fdacf 308 Gene3D G3DSA:3.40.800.10 2 306 3.4E-81 T 14-10-2018 PhaeoP54_03986 73e7b53a8e87dd4efcbccea4695c1235 130 SUPERFAMILY SSF53955 19 126 1.8E-30 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily PhaeoP54_03986 73e7b53a8e87dd4efcbccea4695c1235 130 Gene3D G3DSA:1.10.530.10 19 128 1.0E-26 T 14-10-2018 PhaeoP54_03986 73e7b53a8e87dd4efcbccea4695c1235 130 Pfam PF01464 Transglycosylase SLT domain 23 113 1.4E-13 T 14-10-2018 IPR008258 Transglycosylase SLT domain 1 PhaeoP54_04063 e97a1841bb855f2a5d6a0db6fde14feb 379 Gene3D G3DSA:3.10.560.10 180 255 2.4E-56 T 14-10-2018 PhaeoP54_04063 e97a1841bb855f2a5d6a0db6fde14feb 379 Gene3D G3DSA:3.10.560.10 256 349 2.4E-56 T 14-10-2018 PhaeoP54_04063 e97a1841bb855f2a5d6a0db6fde14feb 379 Pfam PF02563 Polysaccharide biosynthesis/export protein 89 167 1.6E-14 T 14-10-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 PhaeoP54_04063 e97a1841bb855f2a5d6a0db6fde14feb 379 Gene3D G3DSA:3.30.1950.10 94 174 2.4E-56 T 14-10-2018 PhaeoP54_01299 33dc56b65677846fcabe88263412fa7c 276 SUPERFAMILY SSF161098 8 276 7.33E-59 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_01299 33dc56b65677846fcabe88263412fa7c 276 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 90 261 3.5E-15 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PhaeoP54_01299 33dc56b65677846fcabe88263412fa7c 276 Gene3D G3DSA:1.10.3720.10 6 268 3.2E-47 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_02053 a6c5aded018edb8b0c78b66b8edb44a1 237 SUPERFAMILY SSF52540 14 234 3.34E-62 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_02053 a6c5aded018edb8b0c78b66b8edb44a1 237 SMART SM00382 44 232 1.7E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_02053 a6c5aded018edb8b0c78b66b8edb44a1 237 Gene3D G3DSA:3.40.50.300 14 236 2.4E-62 T 14-10-2018 PhaeoP54_02053 a6c5aded018edb8b0c78b66b8edb44a1 237 Pfam PF00005 ABC transporter 35 183 9.4E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PhaeoP54_02053 a6c5aded018edb8b0c78b66b8edb44a1 237 ProSitePatterns PS00211 ABC transporters family signature. 156 170 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PhaeoP54_03946 e07d9d79d26d03cbeca1da3f128a5fd6 310 Gene3D G3DSA:1.10.3720.10 66 303 2.5E-55 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_03946 e07d9d79d26d03cbeca1da3f128a5fd6 310 SUPERFAMILY SSF161098 70 296 5.89E-51 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_03946 e07d9d79d26d03cbeca1da3f128a5fd6 310 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 103 297 2.1E-14 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PhaeoP54_03580 584f70beb0bdf59c209663d24986e21c 385 Pfam PF01546 Peptidase family M20/M25/M40 69 379 8.3E-40 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 PhaeoP54_03580 584f70beb0bdf59c209663d24986e21c 385 Hamap MF_01690 Succinyl-diaminopimelate desuccinylase [dapE]. 6 383 45.647 T 14-10-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 PhaeoP54_03580 584f70beb0bdf59c209663d24986e21c 385 Gene3D G3DSA:3.30.70.360 184 301 3.5E-112 T 14-10-2018 PhaeoP54_03580 584f70beb0bdf59c209663d24986e21c 385 Gene3D G3DSA:3.40.630.10 11 370 3.5E-112 T 14-10-2018 PhaeoP54_03580 584f70beb0bdf59c209663d24986e21c 385 TIGRFAM TIGR01246 dapE_proteo: succinyl-diaminopimelate desuccinylase 10 379 7.1E-115 T 14-10-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 PhaeoP54_03580 584f70beb0bdf59c209663d24986e21c 385 SUPERFAMILY SSF53187 10 382 1.0E-58 T 14-10-2018 PhaeoP54_03580 584f70beb0bdf59c209663d24986e21c 385 SUPERFAMILY SSF55031 184 294 6.73E-27 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain PhaeoP54_03580 584f70beb0bdf59c209663d24986e21c 385 Pfam PF07687 Peptidase dimerisation domain 180 285 4.2E-21 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain PhaeoP54_03580 584f70beb0bdf59c209663d24986e21c 385 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 103 140 - T 14-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 PhaeoP54_00378 a4d851a579782b8553755ef5bc732386 94 PIRSF PIRSF030200 1 94 8.0E-43 T 14-10-2018 IPR009359 Phenylacetic acid degradation B PhaeoP54_00378 a4d851a579782b8553755ef5bc732386 94 TIGRFAM TIGR02157 PA_CoA_Oxy2: phenylacetate-CoA oxygenase, PaaH subunit 5 92 1.2E-42 T 14-10-2018 IPR009359 Phenylacetic acid degradation B PhaeoP54_00378 a4d851a579782b8553755ef5bc732386 94 Pfam PF06243 Phenylacetic acid degradation B 4 91 4.4E-38 T 14-10-2018 IPR009359 Phenylacetic acid degradation B PhaeoP54_00378 a4d851a579782b8553755ef5bc732386 94 Gene3D G3DSA:3.10.20.520 1 64 9.4E-32 T 14-10-2018 IPR038693 Phenylacetyl-CoA epoxidase, subunit B PhaeoP54_04000 5e2147f08b0307141ad8c4642204175b 722 Gene3D G3DSA:3.40.50.300 303 533 6.6E-43 T 14-10-2018 PhaeoP54_04000 5e2147f08b0307141ad8c4642204175b 722 Pfam PF02534 Type IV secretory system Conjugative DNA transfer 94 540 2.9E-88 T 14-10-2018 IPR003688 Type IV secretion system protein TraG/VirD4 GO:0009291|GO:0016020 PhaeoP54_04000 5e2147f08b0307141ad8c4642204175b 722 SUPERFAMILY SSF52540 104 538 8.92E-53 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_00027 4779d659616cf203913df995dc116885 476 SUPERFAMILY SSF55103 219 468 2.45E-43 T 14-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 PhaeoP54_00027 4779d659616cf203913df995dc116885 476 Gene3D G3DSA:3.30.43.10 4 92 3.5E-20 T 14-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 PhaeoP54_00027 4779d659616cf203913df995dc116885 476 SUPERFAMILY SSF56176 5 213 2.29E-65 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 PhaeoP54_00027 4779d659616cf203913df995dc116885 476 Pfam PF01565 FAD binding domain 40 176 2.2E-36 T 14-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 PhaeoP54_00027 4779d659616cf203913df995dc116885 476 Gene3D G3DSA:3.30.70.2740 340 427 9.1E-24 T 14-10-2018 PhaeoP54_00027 4779d659616cf203913df995dc116885 476 Gene3D G3DSA:1.10.45.10 428 468 5.2E-8 T 14-10-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 PhaeoP54_00027 4779d659616cf203913df995dc116885 476 Pfam PF02913 FAD linked oxidases, C-terminal domain 217 467 3.3E-37 T 14-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 PhaeoP54_00027 4779d659616cf203913df995dc116885 476 Gene3D G3DSA:3.30.465.10 94 214 1.6E-42 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 PhaeoP54_00027 4779d659616cf203913df995dc116885 476 Gene3D G3DSA:3.30.70.2190 216 337 1.0E-28 T 14-10-2018 PhaeoP54_01209 5437cd51c76053b0a564f7d7c3bf803f 286 Gene3D G3DSA:3.40.50.1820 37 283 3.6E-28 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold PhaeoP54_01209 5437cd51c76053b0a564f7d7c3bf803f 286 Pfam PF02230 Phospholipase/Carboxylesterase 57 204 3.2E-8 T 14-10-2018 IPR003140 Phospholipase/carboxylesterase/thioesterase GO:0016787 PhaeoP54_01209 5437cd51c76053b0a564f7d7c3bf803f 286 SUPERFAMILY SSF53474 52 280 1.14E-26 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold PhaeoP54_01571 714603564cc7202517ff17243bdf672f 285 Pfam PF07310 PAS domain 32 164 7.1E-39 T 14-10-2018 IPR009922 Protein of unknown function DUF1457 PhaeoP54_02137 f5e1c76508a83b53d8fcc3a70932ae3b 980 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 492 498 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 PhaeoP54_02137 f5e1c76508a83b53d8fcc3a70932ae3b 980 SUPERFAMILY SSF53335 162 559 2.35E-40 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PhaeoP54_02137 f5e1c76508a83b53d8fcc3a70932ae3b 980 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 489 501 6.0E-5 T 14-10-2018 PhaeoP54_02137 f5e1c76508a83b53d8fcc3a70932ae3b 980 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 380 394 6.0E-5 T 14-10-2018 PhaeoP54_00373 833c9443ebbca6a8bfb0103bd5e887e3 288 Pfam PF01063 Amino-transferase class IV 36 260 6.3E-43 T 14-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 PhaeoP54_00373 833c9443ebbca6a8bfb0103bd5e887e3 288 SUPERFAMILY SSF56752 9 285 3.66E-69 T 14-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 PhaeoP54_00373 833c9443ebbca6a8bfb0103bd5e887e3 288 Gene3D G3DSA:3.20.10.10 133 287 2.3E-38 T 14-10-2018 PhaeoP54_00373 833c9443ebbca6a8bfb0103bd5e887e3 288 Gene3D G3DSA:3.30.470.10 2 129 3.5E-30 T 14-10-2018 PhaeoP54_00373 833c9443ebbca6a8bfb0103bd5e887e3 288 ProSitePatterns PS00770 Aminotransferases class-IV signature. 187 216 - T 14-10-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 PhaeoP54_04035 1bebc1965f1933a667c813ea8dafa8c3 471 SUPERFAMILY SSF52540 145 385 2.21E-37 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_04035 1bebc1965f1933a667c813ea8dafa8c3 471 Gene3D G3DSA:3.40.50.300 146 463 8.0E-51 T 14-10-2018 PhaeoP54_04035 1bebc1965f1933a667c813ea8dafa8c3 471 Pfam PF13614 AAA domain 145 345 1.4E-31 T 14-10-2018 IPR025669 AAA domain PhaeoP54_02274 e60e2ac0227d699f77069d9c7efa6af9 300 Pfam PF00274 Fructose-bisphosphate aldolase class-I 15 219 1.3E-11 T 14-10-2018 IPR000741 Fructose-bisphosphate aldolase, class-I GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385|Reactome: R-HSA-70171|Reactome: R-HSA-70263 PhaeoP54_02274 e60e2ac0227d699f77069d9c7efa6af9 300 SUPERFAMILY SSF51569 10 300 5.76E-93 T 14-10-2018 PhaeoP54_02274 e60e2ac0227d699f77069d9c7efa6af9 300 Gene3D G3DSA:3.20.20.70 4 300 4.4E-119 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PhaeoP54_03169 2edb62d58709ec2fc2702e7c21be7930 313 Gene3D G3DSA:3.40.190.100 107 242 3.8E-31 T 14-10-2018 PhaeoP54_03169 2edb62d58709ec2fc2702e7c21be7930 313 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 24 303 2.7E-56 T 14-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 PhaeoP54_03169 2edb62d58709ec2fc2702e7c21be7930 313 Gene3D G3DSA:3.10.105.10 2 100 1.2E-10 T 14-10-2018 PhaeoP54_03169 2edb62d58709ec2fc2702e7c21be7930 313 SUPERFAMILY SSF53850 22 313 9.41E-66 T 14-10-2018 PhaeoP54_01830 15727e4f5ab878c17731f0e429a1275f 435 SUPERFAMILY SSF141571 265 389 4.71E-17 T 14-10-2018 PhaeoP54_01830 15727e4f5ab878c17731f0e429a1275f 435 Gene3D G3DSA:2.160.20.80 252 403 4.9E-17 T 14-10-2018 PhaeoP54_01830 15727e4f5ab878c17731f0e429a1275f 435 Pfam PF00805 Pentapeptide repeats (8 copies) 304 339 7.7E-4 T 14-10-2018 IPR001646 Pentapeptide repeat PhaeoP54_01830 15727e4f5ab878c17731f0e429a1275f 435 Pfam PF00805 Pentapeptide repeats (8 copies) 265 297 6.9E-5 T 14-10-2018 IPR001646 Pentapeptide repeat PhaeoP54_02917 fbafbca77c359d9b614f887f7acb159e 623 SUPERFAMILY SSF56300 9 339 3.32E-66 T 14-10-2018 PhaeoP54_02917 fbafbca77c359d9b614f887f7acb159e 623 Gene3D G3DSA:3.60.21.10 9 341 1.8E-80 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like PhaeoP54_02917 fbafbca77c359d9b614f887f7acb159e 623 PRINTS PR01607 Apyrase family signature 264 284 6.4E-23 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 PhaeoP54_02917 fbafbca77c359d9b614f887f7acb159e 623 PRINTS PR01607 Apyrase family signature 414 437 6.4E-23 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 PhaeoP54_02917 fbafbca77c359d9b614f887f7acb159e 623 PRINTS PR01607 Apyrase family signature 13 31 6.4E-23 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 PhaeoP54_02917 fbafbca77c359d9b614f887f7acb159e 623 PRINTS PR01607 Apyrase family signature 514 533 6.4E-23 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 PhaeoP54_02917 fbafbca77c359d9b614f887f7acb159e 623 PRINTS PR01607 Apyrase family signature 208 225 6.4E-23 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 PhaeoP54_02917 fbafbca77c359d9b614f887f7acb159e 623 PRINTS PR01607 Apyrase family signature 236 259 6.4E-23 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 PhaeoP54_02917 fbafbca77c359d9b614f887f7acb159e 623 Pfam PF02872 5'-nucleotidase, C-terminal domain 344 539 1.5E-19 T 14-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 PhaeoP54_02917 fbafbca77c359d9b614f887f7acb159e 623 ProSitePatterns PS00785 5'-nucleotidase signature 1. 15 27 - T 14-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 PhaeoP54_02917 fbafbca77c359d9b614f887f7acb159e 623 SUPERFAMILY SSF55816 343 562 2.49E-31 T 14-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 PhaeoP54_02917 fbafbca77c359d9b614f887f7acb159e 623 Gene3D G3DSA:3.90.780.10 393 566 4.4E-39 T 14-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 PhaeoP54_02917 fbafbca77c359d9b614f887f7acb159e 623 Pfam PF00149 Calcineurin-like phosphoesterase 15 252 9.4E-6 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 PhaeoP54_02098 3c524b3d31f96ee2bd30a24c75a0ca1a 446 Gene3D G3DSA:3.20.20.140 59 428 1.8E-128 T 14-10-2018 PhaeoP54_02098 3c524b3d31f96ee2bd30a24c75a0ca1a 446 Pfam PF01979 Amidohydrolase family 54 416 1.2E-56 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 PhaeoP54_02098 3c524b3d31f96ee2bd30a24c75a0ca1a 446 SUPERFAMILY SSF51556 57 369 3.99E-90 T 14-10-2018 IPR032466 Metal-dependent hydrolase PhaeoP54_02098 3c524b3d31f96ee2bd30a24c75a0ca1a 446 SUPERFAMILY SSF51338 12 443 1.7E-16 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 PhaeoP54_02098 3c524b3d31f96ee2bd30a24c75a0ca1a 446 Gene3D G3DSA:2.30.40.10 13 423 1.8E-128 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 PhaeoP54_00852 edbdc895f26b323cc68022c8a3a478c3 224 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 148 167 1.9E-19 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_00852 edbdc895f26b323cc68022c8a3a478c3 224 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 1.9E-19 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_00852 edbdc895f26b323cc68022c8a3a478c3 224 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 123 139 1.9E-19 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_00852 edbdc895f26b323cc68022c8a3a478c3 224 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 189 209 1.9E-19 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_00852 edbdc895f26b323cc68022c8a3a478c3 224 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 169 186 1.9E-19 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_00852 edbdc895f26b323cc68022c8a3a478c3 224 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 76 87 1.9E-19 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_00852 edbdc895f26b323cc68022c8a3a478c3 224 SUPERFAMILY SSF51735 2 211 1.83E-56 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PhaeoP54_00852 edbdc895f26b323cc68022c8a3a478c3 224 Pfam PF00106 short chain dehydrogenase 4 192 4.3E-42 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_00852 edbdc895f26b323cc68022c8a3a478c3 224 Gene3D G3DSA:3.40.50.720 1 224 9.5E-56 T 14-10-2018 PhaeoP54_01370 7b93b7c1356b3bd2c7b61d79f3f23a53 409 Gene3D G3DSA:3.90.1150.10 23 403 1.1E-104 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 PhaeoP54_01370 7b93b7c1356b3bd2c7b61d79f3f23a53 409 Gene3D G3DSA:3.40.640.10 32 287 1.1E-104 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PhaeoP54_01370 7b93b7c1356b3bd2c7b61d79f3f23a53 409 SUPERFAMILY SSF53383 4 407 5.11E-80 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PhaeoP54_01370 7b93b7c1356b3bd2c7b61d79f3f23a53 409 Pfam PF00266 Aminotransferase class-V 302 399 4.5E-5 T 14-10-2018 IPR000192 Aminotransferase class V domain PhaeoP54_01370 7b93b7c1356b3bd2c7b61d79f3f23a53 409 Pfam PF00266 Aminotransferase class-V 25 240 9.3E-42 T 14-10-2018 IPR000192 Aminotransferase class V domain PhaeoP54_02913 68b51774d370b22e18de574a575a5eaf 167 Pfam PF00034 Cytochrome c 71 165 1.5E-7 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PhaeoP54_02913 68b51774d370b22e18de574a575a5eaf 167 Gene3D G3DSA:1.10.760.10 28 164 7.6E-41 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PhaeoP54_02913 68b51774d370b22e18de574a575a5eaf 167 PRINTS PR00604 Class IA and IB cytochrome C signature 139 149 1.9E-12 T 14-10-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PhaeoP54_02913 68b51774d370b22e18de574a575a5eaf 167 PRINTS PR00604 Class IA and IB cytochrome C signature 90 105 1.9E-12 T 14-10-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PhaeoP54_02913 68b51774d370b22e18de574a575a5eaf 167 PRINTS PR00604 Class IA and IB cytochrome C signature 156 164 1.9E-12 T 14-10-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PhaeoP54_02913 68b51774d370b22e18de574a575a5eaf 167 PRINTS PR00604 Class IA and IB cytochrome C signature 120 136 1.9E-12 T 14-10-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PhaeoP54_02913 68b51774d370b22e18de574a575a5eaf 167 PRINTS PR00604 Class IA and IB cytochrome C signature 106 116 1.9E-12 T 14-10-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PhaeoP54_02913 68b51774d370b22e18de574a575a5eaf 167 PRINTS PR00604 Class IA and IB cytochrome C signature 78 85 1.9E-12 T 14-10-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PhaeoP54_02913 68b51774d370b22e18de574a575a5eaf 167 SUPERFAMILY SSF46626 66 166 1.83E-28 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PhaeoP54_02479 29b005acb763b4443c83d25462cb1b40 180 SUPERFAMILY SSF46785 30 150 1.52E-10 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_02479 29b005acb763b4443c83d25462cb1b40 180 Gene3D G3DSA:1.10.10.10 12 167 6.6E-8 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_02479 29b005acb763b4443c83d25462cb1b40 180 Pfam PF13463 Winged helix DNA-binding domain 59 124 1.3E-15 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PhaeoP54_01591 69b829a2a7c17c7c2b1f688fc0182341 370 SUPERFAMILY SSF53067 155 360 7.56E-38 T 14-10-2018 PhaeoP54_01591 69b829a2a7c17c7c2b1f688fc0182341 370 Gene3D G3DSA:3.30.420.40 21 146 6.7E-41 T 14-10-2018 PhaeoP54_01591 69b829a2a7c17c7c2b1f688fc0182341 370 Pfam PF02541 Ppx/GppA phosphatase family 44 359 4.0E-49 T 14-10-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 PhaeoP54_01591 69b829a2a7c17c7c2b1f688fc0182341 370 Gene3D G3DSA:3.30.420.150 153 362 5.5E-43 T 14-10-2018 PhaeoP54_01591 69b829a2a7c17c7c2b1f688fc0182341 370 SUPERFAMILY SSF53067 29 150 1.31E-35 T 14-10-2018 PhaeoP54_00019 037f54a4efa390e69df3755b00e2dcd5 164 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 28 155 3.1E-22 T 14-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ PhaeoP54_00244 12797f86822a44f8dc8a1527d3442d0a 293 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 102 288 8.7E-18 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PhaeoP54_00244 12797f86822a44f8dc8a1527d3442d0a 293 Gene3D G3DSA:1.10.3720.10 12 286 3.8E-47 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_00244 12797f86822a44f8dc8a1527d3442d0a 293 SUPERFAMILY SSF161098 18 291 9.81E-54 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_03919 99f1a8e4f4d6918016c9a4eeb025e5b6 433 SUPERFAMILY SSF47336 3 98 6.48E-9 T 14-10-2018 IPR036736 ACP-like superfamily PhaeoP54_03919 99f1a8e4f4d6918016c9a4eeb025e5b6 433 Pfam PF00550 Phosphopantetheine attachment site 29 76 1.1E-4 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain PhaeoP54_03919 99f1a8e4f4d6918016c9a4eeb025e5b6 433 Gene3D G3DSA:1.10.1200.10 5 79 3.0E-8 T 14-10-2018 IPR036736 ACP-like superfamily PhaeoP54_01602 1a3080e621d25024b275a99653e91f8e 869 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 139 672 1.1E-76 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit PhaeoP54_01602 1a3080e621d25024b275a99653e91f8e 869 Pfam PF11874 Domain of unknown function (DUF3394) 677 862 2.4E-62 T 14-10-2018 IPR021814 Protein of unknown function DUF3394 PhaeoP54_01602 1a3080e621d25024b275a99653e91f8e 869 TIGRFAM TIGR02123 TRAP_fused: TRAP transporter, 4TM/12TM fusion protein 36 726 3.0E-192 T 14-10-2018 IPR011853 TRAP C4-dicarboxylate transport system permease, fused DctM-DctQ PhaeoP54_02366 0b610ee7e058892b03f7de136a116a45 289 Gene3D G3DSA:3.40.50.11660 131 262 2.6E-18 T 14-10-2018 IPR038577 GT10-like superfamily PhaeoP54_02366 0b610ee7e058892b03f7de136a116a45 289 SUPERFAMILY SSF53756 27 256 2.35E-35 T 14-10-2018 PhaeoP54_00209 a219b3a8495aff99fae14fbed03c19ae 423 SUPERFAMILY SSF103473 49 414 1.96E-18 T 14-10-2018 IPR036259 MFS transporter superfamily PhaeoP54_00209 a219b3a8495aff99fae14fbed03c19ae 423 Gene3D G3DSA:1.20.1250.20 28 219 1.7E-5 T 14-10-2018 PhaeoP54_00209 a219b3a8495aff99fae14fbed03c19ae 423 Gene3D G3DSA:1.20.1250.20 245 418 1.5E-9 T 14-10-2018 PhaeoP54_03470 db99e195fdc3ad94938522a748169e22 977 Pfam PF12705 PD-(D/E)XK nuclease superfamily 710 917 6.7E-17 T 14-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type PhaeoP54_03470 db99e195fdc3ad94938522a748169e22 977 TIGRFAM TIGR02786 addB_alphas: double-strand break repair protein AddB 10 966 2.8E-295 T 14-10-2018 IPR014153 Double-strand break repair protein AddB PhaeoP54_03470 db99e195fdc3ad94938522a748169e22 977 SUPERFAMILY SSF52540 318 657 3.54E-42 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_03935 441c47ccf2209ed83526b929c9ee2203 458 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 92 107 - T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 PhaeoP54_03935 441c47ccf2209ed83526b929c9ee2203 458 TIGRFAM TIGR00835 agcS: amino acid carrier protein 16 442 1.3E-151 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 PhaeoP54_03935 441c47ccf2209ed83526b929c9ee2203 458 PRINTS PR00175 Sodium/alanine symporter signature 411 431 1.2E-55 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 PhaeoP54_03935 441c47ccf2209ed83526b929c9ee2203 458 PRINTS PR00175 Sodium/alanine symporter signature 308 326 1.2E-55 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 PhaeoP54_03935 441c47ccf2209ed83526b929c9ee2203 458 PRINTS PR00175 Sodium/alanine symporter signature 92 114 1.2E-55 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 PhaeoP54_03935 441c47ccf2209ed83526b929c9ee2203 458 PRINTS PR00175 Sodium/alanine symporter signature 213 232 1.2E-55 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 PhaeoP54_03935 441c47ccf2209ed83526b929c9ee2203 458 PRINTS PR00175 Sodium/alanine symporter signature 185 203 1.2E-55 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 PhaeoP54_03935 441c47ccf2209ed83526b929c9ee2203 458 PRINTS PR00175 Sodium/alanine symporter signature 352 374 1.2E-55 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 PhaeoP54_03935 441c47ccf2209ed83526b929c9ee2203 458 Pfam PF01235 Sodium:alanine symporter family 57 449 1.4E-145 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 PhaeoP54_03606 b705bc022b172673983585f5ad262e23 99 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 6 93 7.8E-10 T 14-10-2018 IPR008407 Branched-chain amino acid transport, AzlD PhaeoP54_02275 8f6b5a7287a6bdabe174a6eed765738b 261 SUPERFAMILY SSF52096 3 261 1.17E-73 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily PhaeoP54_02275 8f6b5a7287a6bdabe174a6eed765738b 261 Gene3D G3DSA:3.90.226.10 1 204 1.7E-71 T 14-10-2018 PhaeoP54_02275 8f6b5a7287a6bdabe174a6eed765738b 261 Pfam PF00378 Enoyl-CoA hydratase/isomerase 7 260 2.4E-45 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 PhaeoP54_02275 8f6b5a7287a6bdabe174a6eed765738b 261 Gene3D G3DSA:1.10.12.10 205 261 2.0E-19 T 14-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal PhaeoP54_02275 8f6b5a7287a6bdabe174a6eed765738b 261 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 105 125 - T 14-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 PhaeoP54_00146 4099b5ccda1e26197da05447d027aa22 423 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 420 43.845 T 14-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 PhaeoP54_00146 4099b5ccda1e26197da05447d027aa22 423 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 410 1.7E-97 T 14-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 PhaeoP54_00146 4099b5ccda1e26197da05447d027aa22 423 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 419 7.3E-170 T 14-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 PhaeoP54_00146 4099b5ccda1e26197da05447d027aa22 423 SUPERFAMILY SSF55205 1 421 2.13E-133 T 14-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 PhaeoP54_00146 4099b5ccda1e26197da05447d027aa22 423 Gene3D G3DSA:3.65.10.10 21 232 1.7E-159 T 14-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 PhaeoP54_00146 4099b5ccda1e26197da05447d027aa22 423 Gene3D G3DSA:3.65.10.10 6 417 1.7E-159 T 14-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 PhaeoP54_03241 1a189a331cd6ca09d752fdf3f6b0a335 167 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 24 141 5.1E-7 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain PhaeoP54_03241 1a189a331cd6ca09d752fdf3f6b0a335 167 SUPERFAMILY SSF54593 19 154 6.33E-23 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PhaeoP54_03241 1a189a331cd6ca09d752fdf3f6b0a335 167 Gene3D G3DSA:3.10.180.10 18 143 2.5E-24 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PhaeoP54_02995 b830e2384d9641735d080a992d7cbe09 338 SUPERFAMILY SSF53850 24 253 7.76E-47 T 14-10-2018 PhaeoP54_02995 b830e2384d9641735d080a992d7cbe09 338 Gene3D G3DSA:3.40.190.10 125 220 1.6E-49 T 14-10-2018 PhaeoP54_02995 b830e2384d9641735d080a992d7cbe09 338 Gene3D G3DSA:3.40.190.10 23 252 1.6E-49 T 14-10-2018 PhaeoP54_02995 b830e2384d9641735d080a992d7cbe09 338 SMART SM00062 33 262 8.2E-47 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PhaeoP54_02995 b830e2384d9641735d080a992d7cbe09 338 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 34 252 3.6E-26 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PhaeoP54_00669 8857f6c7c4821e5b8a0496f414bdc412 211 Gene3D G3DSA:3.40.50.150 1 209 1.3E-34 T 14-10-2018 PhaeoP54_00669 8857f6c7c4821e5b8a0496f414bdc412 211 Pfam PF13649 Methyltransferase domain 44 129 2.4E-16 T 14-10-2018 PhaeoP54_00669 8857f6c7c4821e5b8a0496f414bdc412 211 SUPERFAMILY SSF53335 6 208 5.73E-34 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PhaeoP54_02138 8329202065fcf4743a6ef758b4b8339c 346 Gene3D G3DSA:3.40.91.100 187 333 8.3E-11 T 14-10-2018 PhaeoP54_02138 8329202065fcf4743a6ef758b4b8339c 346 Pfam PF04471 Restriction endonuclease 206 318 9.9E-25 T 14-10-2018 IPR007560 Restriction endonuclease type IV, Mrr GO:0003677|GO:0004519|GO:0009307 PhaeoP54_02138 8329202065fcf4743a6ef758b4b8339c 346 SUPERFAMILY SSF52980 209 322 2.14E-13 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 PhaeoP54_02624 940609b8e88cefc4757308b17de9912e 381 Gene3D G3DSA:3.60.130.10 94 376 1.9E-70 T 14-10-2018 PhaeoP54_02624 940609b8e88cefc4757308b17de9912e 381 Gene3D G3DSA:3.30.2020.30 11 93 2.3E-10 T 14-10-2018 IPR038492 GBBH-like, N-terminal domain superfamily Reactome: R-HSA-71262 PhaeoP54_02624 940609b8e88cefc4757308b17de9912e 381 SUPERFAMILY SSF51197 77 374 1.88E-55 T 14-10-2018 PhaeoP54_02624 940609b8e88cefc4757308b17de9912e 381 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 131 358 8.6E-31 T 14-10-2018 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: R-HSA-71262 PhaeoP54_01939 7185109c65ed3aa33bfefcf66b8b44fc 833 SUPERFAMILY SSF56601 217 784 7.83E-125 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like PhaeoP54_01939 7185109c65ed3aa33bfefcf66b8b44fc 833 Pfam PF17092 Penicillin-binding protein OB-like domain 329 436 7.3E-19 T 14-10-2018 IPR031376 Penicillin-binding protein, OB-like domain KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 PhaeoP54_01939 7185109c65ed3aa33bfefcf66b8b44fc 833 Gene3D G3DSA:3.40.710.10 411 773 3.0E-106 T 14-10-2018 PhaeoP54_01939 7185109c65ed3aa33bfefcf66b8b44fc 833 Gene3D G3DSA:3.40.710.10 265 349 1.2E-7 T 14-10-2018 PhaeoP54_01939 7185109c65ed3aa33bfefcf66b8b44fc 833 Gene3D G3DSA:1.10.3810.10 54 251 2.7E-71 T 14-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 PhaeoP54_01939 7185109c65ed3aa33bfefcf66b8b44fc 833 SUPERFAMILY SSF53955 47 255 2.59E-68 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily PhaeoP54_01939 7185109c65ed3aa33bfefcf66b8b44fc 833 Pfam PF00912 Transglycosylase 60 235 1.0E-59 T 14-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 PhaeoP54_01939 7185109c65ed3aa33bfefcf66b8b44fc 833 Pfam PF00905 Penicillin binding protein transpeptidase domain 438 729 1.7E-34 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 PhaeoP54_01939 7185109c65ed3aa33bfefcf66b8b44fc 833 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 70 733 5.0E-176 T 14-10-2018 PhaeoP54_03719 f169ca1cccfa6daebd66ba65abeca4c6 349 SMART SM00382 28 217 1.3E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_03719 f169ca1cccfa6daebd66ba65abeca4c6 349 Gene3D G3DSA:3.40.50.300 4 227 1.6E-63 T 14-10-2018 PhaeoP54_03719 f169ca1cccfa6daebd66ba65abeca4c6 349 Gene3D G3DSA:2.40.50.140 288 339 3.6E-8 T 14-10-2018 PhaeoP54_03719 f169ca1cccfa6daebd66ba65abeca4c6 349 Pfam PF00005 ABC transporter 19 167 1.6E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PhaeoP54_03719 f169ca1cccfa6daebd66ba65abeca4c6 349 Gene3D G3DSA:2.40.50.940 228 287 3.6E-8 T 14-10-2018 PhaeoP54_03719 f169ca1cccfa6daebd66ba65abeca4c6 349 SUPERFAMILY SSF52540 4 244 3.59E-77 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_03719 f169ca1cccfa6daebd66ba65abeca4c6 349 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PhaeoP54_03719 f169ca1cccfa6daebd66ba65abeca4c6 349 Pfam PF08402 TOBE domain 281 344 2.4E-5 T 14-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 PhaeoP54_03719 f169ca1cccfa6daebd66ba65abeca4c6 349 SUPERFAMILY SSF50331 274 342 6.8E-5 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal PhaeoP54_03571 aef9aeb60eddc839f3b8038e16d9b718 261 SUPERFAMILY SSF53187 2 259 4.08E-81 T 14-10-2018 PhaeoP54_03571 aef9aeb60eddc839f3b8038e16d9b718 261 TIGRFAM TIGR02017 hutG_amidohyd: N-formylglutamate deformylase 2 257 1.4E-109 T 14-10-2018 IPR010247 N-formylglutamate deformylase PhaeoP54_03571 aef9aeb60eddc839f3b8038e16d9b718 261 Gene3D G3DSA:3.40.630.40 1 260 1.9E-66 T 14-10-2018 PhaeoP54_03571 aef9aeb60eddc839f3b8038e16d9b718 261 Pfam PF05013 N-formylglutamate amidohydrolase 9 226 1.3E-65 T 14-10-2018 IPR007709 N-formylglutamate amidohydrolase PhaeoP54_01015 bff9b583425c7f5f9a2e85bb17d9d1fa 134 Pfam PF17267 Family of unknown function (DUF5333) 23 132 2.4E-41 T 14-10-2018 IPR020349 Uncharacterised protein family 14.7kDa PhaeoP54_01015 bff9b583425c7f5f9a2e85bb17d9d1fa 134 ProDom PD082112 PRECURSOR SIGNAL 5'REGION NQO3 URF3 6 134 9.0E-39 T 14-10-2018 IPR020349 Uncharacterised protein family 14.7kDa PhaeoP54_02747 4a3685f4091f5e83525a1d84aa1e8261 385 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 164 383 7.6E-40 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PhaeoP54_02747 4a3685f4091f5e83525a1d84aa1e8261 385 SUPERFAMILY SSF161098 142 372 8.24E-15 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_03223 ed8560392d3d22e85fb7f66a30924749 529 Pfam PF02142 MGS-like domain 19 132 1.4E-25 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain PhaeoP54_03223 ed8560392d3d22e85fb7f66a30924749 529 SMART SM00851 19 133 1.4E-57 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain PhaeoP54_03223 ed8560392d3d22e85fb7f66a30924749 529 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 8 529 5.7E-211 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 PhaeoP54_03223 ed8560392d3d22e85fb7f66a30924749 529 Pfam PF01808 AICARFT/IMPCHase bienzyme 138 453 8.3E-117 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 PhaeoP54_03223 ed8560392d3d22e85fb7f66a30924749 529 PIRSF PIRSF000414 1 529 1.4E-210 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 PhaeoP54_03223 ed8560392d3d22e85fb7f66a30924749 529 Gene3D G3DSA:3.40.140.20 208 362 2.8E-57 T 14-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 PhaeoP54_03223 ed8560392d3d22e85fb7f66a30924749 529 Gene3D G3DSA:3.40.140.20 384 529 4.9E-55 T 14-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 PhaeoP54_03223 ed8560392d3d22e85fb7f66a30924749 529 SUPERFAMILY SSF53927 214 529 5.72E-129 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 PhaeoP54_03223 ed8560392d3d22e85fb7f66a30924749 529 SMART SM00798 138 454 3.0E-197 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 PhaeoP54_03223 ed8560392d3d22e85fb7f66a30924749 529 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 7 529 43.447 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 PhaeoP54_03223 ed8560392d3d22e85fb7f66a30924749 529 Gene3D G3DSA:3.40.50.1380 1 202 6.8E-83 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily PhaeoP54_03223 ed8560392d3d22e85fb7f66a30924749 529 SUPERFAMILY SSF52335 7 198 5.89E-68 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily PhaeoP54_03190 cfc6382eb3d5099bfedbf7d8b92f22ea 183 Pfam PF11158 Protein of unknown function (DUF2938) 15 161 1.6E-53 T 14-10-2018 IPR021329 Protein of unknown function DUF2938 PhaeoP54_02332 074a29554a4e8d111d898274a95c48dd 134 TIGRFAM TIGR03081 metmalonyl_epim: methylmalonyl-CoA epimerase 4 133 2.3E-51 T 14-10-2018 IPR017515 Methylmalonyl-CoA epimerase KEGG: 00280+5.1.99.1|KEGG: 00630+5.1.99.1|KEGG: 00640+5.1.99.1|KEGG: 00720+5.1.99.1|MetaCyc: PWY-5741|MetaCyc: PWY-5743|MetaCyc: PWY-5789|MetaCyc: PWY-6728|MetaCyc: PWY-7384|MetaCyc: PWY-7854|Reactome: R-HSA-71032 PhaeoP54_02332 074a29554a4e8d111d898274a95c48dd 134 SUPERFAMILY SSF54593 1 133 7.43E-38 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PhaeoP54_02332 074a29554a4e8d111d898274a95c48dd 134 Gene3D G3DSA:3.10.180.10 1 134 9.4E-41 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PhaeoP54_02332 074a29554a4e8d111d898274a95c48dd 134 Pfam PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 6 118 4.4E-22 T 14-10-2018 PhaeoP54_00066 58f166dde59845b8d74374699b1d78c1 418 SUPERFAMILY SSF51905 2 354 5.87E-52 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PhaeoP54_00066 58f166dde59845b8d74374699b1d78c1 418 Gene3D G3DSA:3.50.50.60 3 346 3.9E-97 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PhaeoP54_00066 58f166dde59845b8d74374699b1d78c1 418 Pfam PF01494 FAD binding domain 2 348 3.3E-17 T 14-10-2018 IPR002938 FAD-binding domain GO:0071949 PhaeoP54_00066 58f166dde59845b8d74374699b1d78c1 418 SUPERFAMILY SSF54373 174 281 1.35E-32 T 14-10-2018 PhaeoP54_00066 58f166dde59845b8d74374699b1d78c1 418 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 2 24 4.2E-17 T 14-10-2018 PhaeoP54_00066 58f166dde59845b8d74374699b1d78c1 418 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 290 305 4.2E-17 T 14-10-2018 PhaeoP54_00066 58f166dde59845b8d74374699b1d78c1 418 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 305 321 4.2E-17 T 14-10-2018 PhaeoP54_00066 58f166dde59845b8d74374699b1d78c1 418 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 148 163 4.2E-17 T 14-10-2018 PhaeoP54_00066 58f166dde59845b8d74374699b1d78c1 418 Gene3D G3DSA:3.30.9.30 35 284 3.9E-97 T 14-10-2018 PhaeoP54_01674 6f9622e6a73488410c6ae1f39833e855 217 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 55 64 - T 14-10-2018 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 PhaeoP54_01674 6f9622e6a73488410c6ae1f39833e855 217 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 32 209 4.1E-60 T 14-10-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 PhaeoP54_01674 6f9622e6a73488410c6ae1f39833e855 217 SMART SM00987 47 205 5.7E-33 T 14-10-2018 PhaeoP54_01674 6f9622e6a73488410c6ae1f39833e855 217 SMART SM00986 47 205 5.7E-33 T 14-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 PhaeoP54_01674 6f9622e6a73488410c6ae1f39833e855 217 SUPERFAMILY SSF52141 8 216 2.8E-70 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 PhaeoP54_01674 6f9622e6a73488410c6ae1f39833e855 217 Gene3D G3DSA:3.40.470.10 12 217 2.1E-74 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 PhaeoP54_01674 6f9622e6a73488410c6ae1f39833e855 217 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 8 216 34.759 T 14-10-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 PhaeoP54_01674 6f9622e6a73488410c6ae1f39833e855 217 Pfam PF03167 Uracil DNA glycosylase superfamily 50 204 7.4E-24 T 14-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 PhaeoP54_00606 b6c3de3920939315ac791bd2daadcff8 406 SUPERFAMILY SSF103473 7 398 3.01E-56 T 14-10-2018 IPR036259 MFS transporter superfamily PhaeoP54_00606 b6c3de3920939315ac791bd2daadcff8 406 Pfam PF07690 Major Facilitator Superfamily 21 257 3.8E-20 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PhaeoP54_00606 b6c3de3920939315ac791bd2daadcff8 406 Gene3D G3DSA:1.20.1250.20 7 401 1.9E-46 T 14-10-2018 PhaeoP54_01156 5f5f59077222dc646b569455fba8f73e 208 Gene3D G3DSA:1.25.40.10 41 191 1.7E-21 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 PhaeoP54_01156 5f5f59077222dc646b569455fba8f73e 208 SMART SM00028 149 182 5.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 PhaeoP54_01156 5f5f59077222dc646b569455fba8f73e 208 SMART SM00028 81 114 35.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 PhaeoP54_01156 5f5f59077222dc646b569455fba8f73e 208 SMART SM00028 115 148 4.2E-4 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 PhaeoP54_01156 5f5f59077222dc646b569455fba8f73e 208 SUPERFAMILY SSF48452 78 186 1.19E-21 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 PhaeoP54_01156 5f5f59077222dc646b569455fba8f73e 208 Pfam PF07719 Tetratricopeptide repeat 115 148 3.8E-5 T 14-10-2018 IPR013105 Tetratricopeptide repeat 2 PhaeoP54_03618 b22392454ee163c257a53093fbc3d3b9 341 Gene3D G3DSA:3.10.310.10 145 312 2.5E-107 T 14-10-2018 PhaeoP54_03618 b22392454ee163c257a53093fbc3d3b9 341 Pfam PF05544 Proline racemase 9 334 8.1E-129 T 14-10-2018 IPR008794 Proline racemase family PhaeoP54_03618 b22392454ee163c257a53093fbc3d3b9 341 Gene3D G3DSA:3.10.310.10 7 335 2.5E-107 T 14-10-2018 PhaeoP54_03618 b22392454ee163c257a53093fbc3d3b9 341 PIRSF PIRSF029792 1 336 1.2E-114 T 14-10-2018 IPR008794 Proline racemase family PhaeoP54_03618 b22392454ee163c257a53093fbc3d3b9 341 SUPERFAMILY SSF54506 1 333 1.74E-105 T 14-10-2018 PhaeoP54_01259 d9ba433db4b9d403629391dc5959d927 87 Pfam PF10073 Uncharacterized protein conserved in bacteria (DUF2312) 16 86 2.7E-31 T 14-10-2018 IPR018753 Azospirillum phage Cd, Gp10 PhaeoP54_00015 d9ca4cecd3e3a91338a6ef772a250bf7 240 Gene3D G3DSA:3.40.50.1000 5 227 1.2E-80 T 14-10-2018 IPR023214 HAD superfamily PhaeoP54_00015 d9ca4cecd3e3a91338a6ef772a250bf7 240 TIGRFAM TIGR01428 HAD_type_II: haloacid dehalogenase, type II 6 204 4.5E-44 T 14-10-2018 IPR006328 L-2-Haloacid dehalogenase GO:0019120 KEGG: 00361+3.8.1.2|KEGG: 00625+3.8.1.2|MetaCyc: PWY-7425 PhaeoP54_00015 d9ca4cecd3e3a91338a6ef772a250bf7 240 SUPERFAMILY SSF56784 5 231 5.21E-36 T 14-10-2018 IPR036412 HAD-like superfamily PhaeoP54_00015 d9ca4cecd3e3a91338a6ef772a250bf7 240 Gene3D G3DSA:1.10.150.750 20 96 1.2E-80 T 14-10-2018 PhaeoP54_00015 d9ca4cecd3e3a91338a6ef772a250bf7 240 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 110 123 3.3E-6 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 PhaeoP54_00015 d9ca4cecd3e3a91338a6ef772a250bf7 240 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 6 17 3.3E-6 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 PhaeoP54_00015 d9ca4cecd3e3a91338a6ef772a250bf7 240 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 188 201 3.3E-6 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 PhaeoP54_00015 d9ca4cecd3e3a91338a6ef772a250bf7 240 Pfam PF13419 Haloacid dehalogenase-like hydrolase 11 198 4.2E-10 T 14-10-2018 PhaeoP54_01577 43601e0e30f78dcd955060572678f85c 276 Pfam PF00005 ABC transporter 61 205 1.6E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PhaeoP54_01577 43601e0e30f78dcd955060572678f85c 276 SMART SM00382 70 253 4.5E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_01577 43601e0e30f78dcd955060572678f85c 276 Gene3D G3DSA:3.40.50.300 48 276 3.2E-59 T 14-10-2018 PhaeoP54_01577 43601e0e30f78dcd955060572678f85c 276 SUPERFAMILY SSF52540 56 273 1.94E-55 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_02375 b0682c37bfe7baedccd10babb42e256d 293 SUPERFAMILY SSF103481 38 136 2.09E-5 T 14-10-2018 PhaeoP54_02375 b0682c37bfe7baedccd10babb42e256d 293 SUPERFAMILY SSF103481 178 277 1.01E-10 T 14-10-2018 PhaeoP54_02375 b0682c37bfe7baedccd10babb42e256d 293 Pfam PF00892 EamA-like transporter family 147 275 3.8E-12 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 PhaeoP54_00975 f16c031592fbf6ad765549f74b23a644 124 Gene3D G3DSA:3.10.180.10 9 117 1.9E-17 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PhaeoP54_00975 f16c031592fbf6ad765549f74b23a644 124 SUPERFAMILY SSF54593 5 120 1.07E-22 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PhaeoP54_01746 397c30359374b0fbc6e266e7bb67a407 168 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 12 163 2.4E-45 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 PhaeoP54_01746 397c30359374b0fbc6e266e7bb67a407 168 PIRSF PIRSF001467 6 168 2.5E-26 T 14-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 PhaeoP54_01746 397c30359374b0fbc6e266e7bb67a407 168 Gene3D G3DSA:2.40.100.10 2 168 1.0E-42 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily PhaeoP54_01746 397c30359374b0fbc6e266e7bb67a407 168 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 129 144 2.7E-11 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 PhaeoP54_01746 397c30359374b0fbc6e266e7bb67a407 168 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 116 128 2.7E-11 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 PhaeoP54_01746 397c30359374b0fbc6e266e7bb67a407 168 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 24 39 2.7E-11 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 PhaeoP54_01746 397c30359374b0fbc6e266e7bb67a407 168 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 50 62 2.7E-11 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 PhaeoP54_01746 397c30359374b0fbc6e266e7bb67a407 168 SUPERFAMILY SSF50891 8 164 2.78E-45 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily PhaeoP54_01746 397c30359374b0fbc6e266e7bb67a407 168 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 45 62 - T 14-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 PhaeoP54_03463 cde1e798f3d32c3f5e4f64e74395361d 187 Gene3D G3DSA:3.60.20.10 8 184 1.4E-63 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal PhaeoP54_03463 cde1e798f3d32c3f5e4f64e74395361d 187 Hamap MF_00248 ATP-dependent protease subunit HslV [hslV]. 11 183 38.34 T 14-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 PhaeoP54_03463 cde1e798f3d32c3f5e4f64e74395361d 187 Pfam PF00227 Proteasome subunit 10 181 4.9E-22 T 14-10-2018 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: R-HSA-1169091|Reactome: R-HSA-1234176|Reactome: R-HSA-1236974|Reactome: R-HSA-1236978|Reactome: R-HSA-174084|Reactome: R-HSA-174113|Reactome: R-HSA-174154|Reactome: R-HSA-174178|Reactome: R-HSA-174184|Reactome: R-HSA-180534|Reactome: R-HSA-180585|Reactome: R-HSA-187577|Reactome: R-HSA-195253|Reactome: R-HSA-202424|Reactome: R-HSA-211733|Reactome: R-HSA-2467813|Reactome: R-HSA-2871837|Reactome: R-HSA-349425|Reactome: R-HSA-350562|Reactome: R-HSA-382556|Reactome: R-HSA-450408|Reactome: R-HSA-4608870|Reactome: R-HSA-4641257|Reactome: R-HSA-4641258|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5607761|Reactome: R-HSA-5607764|Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5632684|Reactome: R-HSA-5658442|Reactome: R-HSA-5668541|Reactome: R-HSA-5676590|Reactome: R-HSA-5678895|Reactome: R-HSA-5687128|Reactome: R-HSA-5689603|Reactome: R-HSA-5689880|Reactome: R-HSA-68827|Reactome: R-HSA-68949|Reactome: R-HSA-69017|Reactome: R-HSA-69229|Reactome: R-HSA-69481|Reactome: R-HSA-69601|Reactome: R-HSA-8852276|Reactome: R-HSA-8854050|Reactome: R-HSA-8939236|Reactome: R-HSA-8939902|Reactome: R-HSA-8941858|Reactome: R-HSA-8948751|Reactome: R-HSA-8951664|Reactome: R-HSA-9010553|Reactome: R-HSA-9020702|Reactome: R-HSA-9604323|Reactome: R-HSA-983168 PhaeoP54_03463 cde1e798f3d32c3f5e4f64e74395361d 187 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 12 183 4.1E-76 T 14-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 PhaeoP54_03463 cde1e798f3d32c3f5e4f64e74395361d 187 SUPERFAMILY SSF56235 9 183 2.44E-53 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal PhaeoP54_02938 c6b404163fb92b8d48ef28e42240ef39 343 Pfam PF00107 Zinc-binding dehydrogenase 161 289 7.2E-18 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 PhaeoP54_02938 c6b404163fb92b8d48ef28e42240ef39 343 SUPERFAMILY SSF50129 6 146 1.39E-43 T 14-10-2018 IPR011032 GroES-like superfamily PhaeoP54_02938 c6b404163fb92b8d48ef28e42240ef39 343 Gene3D G3DSA:3.40.50.720 130 311 7.3E-126 T 14-10-2018 PhaeoP54_02938 c6b404163fb92b8d48ef28e42240ef39 343 SMART SM00829 22 339 6.9E-4 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 PhaeoP54_02938 c6b404163fb92b8d48ef28e42240ef39 343 Gene3D G3DSA:3.90.180.10 19 339 7.3E-126 T 14-10-2018 PhaeoP54_02938 c6b404163fb92b8d48ef28e42240ef39 343 SUPERFAMILY SSF51735 126 307 1.29E-45 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PhaeoP54_02938 c6b404163fb92b8d48ef28e42240ef39 343 Pfam PF16884 N-terminal domain of oxidoreductase 9 114 1.4E-40 T 14-10-2018 PhaeoP54_00750 398119a1a39606420213d8e9f2b06334 343 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 47 1.3E-13 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 PhaeoP54_00750 398119a1a39606420213d8e9f2b06334 343 SUPERFAMILY SSF53822 72 340 7.46E-43 T 14-10-2018 IPR028082 Periplasmic binding protein-like I PhaeoP54_00750 398119a1a39606420213d8e9f2b06334 343 Gene3D G3DSA:3.40.50.2300 164 296 8.8E-58 T 14-10-2018 PhaeoP54_00750 398119a1a39606420213d8e9f2b06334 343 SMART SM00354 1 70 8.5E-18 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 PhaeoP54_00750 398119a1a39606420213d8e9f2b06334 343 SUPERFAMILY SSF47413 2 57 2.74E-15 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 PhaeoP54_00750 398119a1a39606420213d8e9f2b06334 343 Pfam PF13377 Periplasmic binding protein-like domain 173 336 4.0E-21 T 14-10-2018 PhaeoP54_00750 398119a1a39606420213d8e9f2b06334 343 Gene3D G3DSA:3.40.50.2300 80 316 8.8E-58 T 14-10-2018 PhaeoP54_00750 398119a1a39606420213d8e9f2b06334 343 Gene3D G3DSA:1.10.260.40 1 58 2.5E-17 T 14-10-2018 PhaeoP54_01320 5df82772b09d621a3df690c6ea7de71d 253 ProSitePatterns PS01057 SAICAR synthetase signature 1. 86 100 - T 14-10-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 PhaeoP54_01320 5df82772b09d621a3df690c6ea7de71d 253 Gene3D G3DSA:3.30.470.20 85 224 1.1E-93 T 14-10-2018 PhaeoP54_01320 5df82772b09d621a3df690c6ea7de71d 253 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 4 238 32.313 T 14-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 PhaeoP54_01320 5df82772b09d621a3df690c6ea7de71d 253 ProSitePatterns PS01058 SAICAR synthetase signature 2. 173 181 - T 14-10-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 PhaeoP54_01320 5df82772b09d621a3df690c6ea7de71d 253 TIGRFAM TIGR00081 purC: phosphoribosylaminoimidazolesuccinocarboxamide synthase 4 238 8.2E-67 T 14-10-2018 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234 PhaeoP54_01320 5df82772b09d621a3df690c6ea7de71d 253 Gene3D G3DSA:3.30.200.20 6 235 1.1E-93 T 14-10-2018 PhaeoP54_01320 5df82772b09d621a3df690c6ea7de71d 253 SUPERFAMILY SSF56104 4 236 1.9E-79 T 14-10-2018 PhaeoP54_01320 5df82772b09d621a3df690c6ea7de71d 253 Pfam PF01259 SAICAR synthetase 6 235 4.3E-62 T 14-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 PhaeoP54_00487 2d4df337b95ca0346065ec1d13626bde 131 PIRSF PIRSF019455 2 131 4.1E-31 T 14-10-2018 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 PhaeoP54_00487 2d4df337b95ca0346065ec1d13626bde 131 Pfam PF03965 Penicillinase repressor 10 123 3.4E-28 T 14-10-2018 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 PhaeoP54_00487 2d4df337b95ca0346065ec1d13626bde 131 SUPERFAMILY SSF46785 10 125 3.35E-27 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_00487 2d4df337b95ca0346065ec1d13626bde 131 Gene3D G3DSA:1.10.10.10 5 74 6.4E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_02100 7d3617057d1dea9a06e487fedf0c3997 123 Pfam PF01381 Helix-turn-helix 19 66 7.2E-11 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PhaeoP54_02100 7d3617057d1dea9a06e487fedf0c3997 123 Gene3D G3DSA:1.10.260.40 5 73 2.3E-17 T 14-10-2018 PhaeoP54_02100 7d3617057d1dea9a06e487fedf0c3997 123 SUPERFAMILY SSF47413 2 78 1.39E-28 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 PhaeoP54_02100 7d3617057d1dea9a06e487fedf0c3997 123 SMART SM00530 12 67 1.1E-10 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PhaeoP54_01444 0298d59facebb9a1a923ac14fc1ac8af 287 SUPERFAMILY SSF52540 13 225 1.2E-6 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_02962 35982e2d9f75fe7ad3a19bbdd1780575 602 SMART SM00382 381 565 1.8E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_02962 35982e2d9f75fe7ad3a19bbdd1780575 602 Pfam PF00005 ABC transporter 373 516 8.2E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PhaeoP54_02962 35982e2d9f75fe7ad3a19bbdd1780575 602 Gene3D G3DSA:3.40.50.300 348 601 6.1E-61 T 14-10-2018 PhaeoP54_02962 35982e2d9f75fe7ad3a19bbdd1780575 602 ProSitePatterns PS00211 ABC transporters family signature. 489 503 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PhaeoP54_02962 35982e2d9f75fe7ad3a19bbdd1780575 602 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 566 588 3.9E-12 T 14-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal PhaeoP54_02962 35982e2d9f75fe7ad3a19bbdd1780575 602 SUPERFAMILY SSF52540 357 588 7.94E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_02962 35982e2d9f75fe7ad3a19bbdd1780575 602 Pfam PF02653 Branched-chain amino acid transport system / permease component 36 289 1.1E-26 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 PhaeoP54_00189 f17a5f271c33b529c1996201b3d3dd01 438 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 14 424 2.4E-96 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit PhaeoP54_00189 f17a5f271c33b529c1996201b3d3dd01 438 PIRSF PIRSF006066 5 435 2.1E-101 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 PhaeoP54_00189 f17a5f271c33b529c1996201b3d3dd01 438 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 21 430 1.7E-107 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 PhaeoP54_02333 4520eee75871f2050a6f89076859dfb5 239 SMART SM00448 23 134 2.1E-13 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PhaeoP54_02333 4520eee75871f2050a6f89076859dfb5 239 SUPERFAMILY SSF52172 23 142 9.82E-19 T 14-10-2018 IPR011006 CheY-like superfamily PhaeoP54_02333 4520eee75871f2050a6f89076859dfb5 239 Pfam PF00072 Response regulator receiver domain 25 125 9.8E-14 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PhaeoP54_02333 4520eee75871f2050a6f89076859dfb5 239 Gene3D G3DSA:3.40.50.2300 22 153 5.0E-17 T 14-10-2018 PhaeoP54_02434 aa046c69ca1262042526e8e94c428140 165 SUPERFAMILY SSF46785 17 162 5.17E-33 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_02434 aa046c69ca1262042526e8e94c428140 165 Pfam PF01047 MarR family 59 116 6.0E-15 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PhaeoP54_02434 aa046c69ca1262042526e8e94c428140 165 SMART SM00347 52 150 7.8E-20 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PhaeoP54_02434 aa046c69ca1262042526e8e94c428140 165 PRINTS PR00598 Bacterial regulatory protein MarR family signature 76 92 2.9E-6 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PhaeoP54_02434 aa046c69ca1262042526e8e94c428140 165 PRINTS PR00598 Bacterial regulatory protein MarR family signature 93 108 2.9E-6 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PhaeoP54_02434 aa046c69ca1262042526e8e94c428140 165 PRINTS PR00598 Bacterial regulatory protein MarR family signature 112 128 2.9E-6 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PhaeoP54_02434 aa046c69ca1262042526e8e94c428140 165 Gene3D G3DSA:1.10.10.10 10 164 6.0E-35 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_00076 ff10fccd401e8665cfdf53b7feea35d1 195 Pfam PF13279 Thioesterase-like superfamily 32 165 7.9E-12 T 14-10-2018 PhaeoP54_00076 ff10fccd401e8665cfdf53b7feea35d1 195 Gene3D G3DSA:3.10.129.10 26 168 1.7E-9 T 14-10-2018 PhaeoP54_00076 ff10fccd401e8665cfdf53b7feea35d1 195 SUPERFAMILY SSF54637 5 146 6.47E-24 T 14-10-2018 IPR029069 HotDog domain superfamily PhaeoP54_02768 71d1f59b64314ced5cddf21ca2cead00 257 Pfam PF03746 LamB/YcsF family 5 242 8.2E-98 T 14-10-2018 IPR005501 UPF0271 family, LamB/YcsF/PxpA KEGG: 00480+3.5.2.9|MetaCyc: PWY-4041|MetaCyc: PWY-7942 PhaeoP54_02768 71d1f59b64314ced5cddf21ca2cead00 257 Hamap MF_00691 UPF0271 protein YbgL [ybgL]. 3 247 43.089 T 14-10-2018 IPR005501 UPF0271 family, LamB/YcsF/PxpA KEGG: 00480+3.5.2.9|MetaCyc: PWY-4041|MetaCyc: PWY-7942 PhaeoP54_02768 71d1f59b64314ced5cddf21ca2cead00 257 SUPERFAMILY SSF88713 4 253 1.04E-98 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 PhaeoP54_02768 71d1f59b64314ced5cddf21ca2cead00 257 Gene3D G3DSA:3.20.20.370 3 252 1.4E-100 T 14-10-2018 PhaeoP54_03537 07ffbb0e3e001d4c6a19808852f20e8c 166 Gene3D G3DSA:2.60.450.10 31 161 1.2E-21 T 14-10-2018 PhaeoP54_03537 07ffbb0e3e001d4c6a19808852f20e8c 166 Pfam PF03968 OstA-like protein 41 149 4.1E-19 T 14-10-2018 IPR005653 Organic solvent tolerance-like, N-terminal PhaeoP54_01355 38e1170ed986ef65aecfb4237631f71e 534 Gene3D G3DSA:3.30.300.30 413 520 2.3E-15 T 14-10-2018 PhaeoP54_01355 38e1170ed986ef65aecfb4237631f71e 534 Gene3D G3DSA:3.40.50.12780 24 412 1.1E-82 T 14-10-2018 PhaeoP54_01355 38e1170ed986ef65aecfb4237631f71e 534 SUPERFAMILY SSF56801 27 515 2.62E-85 T 14-10-2018 PhaeoP54_01355 38e1170ed986ef65aecfb4237631f71e 534 Pfam PF00501 AMP-binding enzyme 30 418 1.3E-56 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 PhaeoP54_01256 566eca07ae7d358e101904a1ad09aa4c 287 SUPERFAMILY SSF56281 11 253 4.98E-48 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like PhaeoP54_01256 566eca07ae7d358e101904a1ad09aa4c 287 Pfam PF00753 Metallo-beta-lactamase superfamily 13 204 2.7E-26 T 14-10-2018 IPR001279 Metallo-beta-lactamase PhaeoP54_01256 566eca07ae7d358e101904a1ad09aa4c 287 Gene3D G3DSA:3.60.15.10 1 287 3.7E-108 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like PhaeoP54_01256 566eca07ae7d358e101904a1ad09aa4c 287 SMART SM00849 14 204 9.8E-24 T 14-10-2018 IPR001279 Metallo-beta-lactamase PhaeoP54_04032 089162d6b00500d7b2ee9866628c4e52 337 Pfam PF12358 Protein of unknown function (DUF3644) 64 137 4.0E-24 T 14-10-2018 IPR022104 Protein of unknown function DUF3644 PhaeoP54_03351 2cbe54caea2b6acfba4b54db11f7d7f8 85 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 15 68 2.6E-21 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 PhaeoP54_03351 2cbe54caea2b6acfba4b54db11f7d7f8 85 SUPERFAMILY SSF116842 9 72 4.05E-19 T 14-10-2018 PhaeoP54_03351 2cbe54caea2b6acfba4b54db11f7d7f8 85 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 12 56 1.0E-14 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 PhaeoP54_03351 2cbe54caea2b6acfba4b54db11f7d7f8 85 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 15 75 14.602 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 PhaeoP54_03351 2cbe54caea2b6acfba4b54db11f7d7f8 85 PIRSF PIRSF006488 1 84 1.3E-21 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 PhaeoP54_03351 2cbe54caea2b6acfba4b54db11f7d7f8 85 Pfam PF02609 Exonuclease VII small subunit 16 65 1.1E-18 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 PhaeoP54_03351 2cbe54caea2b6acfba4b54db11f7d7f8 85 Gene3D G3DSA:1.10.287.1040 10 84 2.7E-20 T 14-10-2018 IPR037004 Exonuclease VII, small subunit superfamily GO:0006308|GO:0008855|GO:0009318 PhaeoP54_00418 ae798183a15a3aaa5dc8681127dbf5dd 169 Pfam PF12692 S-adenosyl-L-methionine methyltransferase 8 167 1.0E-59 T 14-10-2018 IPR025690 Methyltransferase, putative PhaeoP54_00418 ae798183a15a3aaa5dc8681127dbf5dd 169 Gene3D G3DSA:3.40.50.150 1 168 7.8E-70 T 14-10-2018 PhaeoP54_02474 40866f7542d88dd08bd6bfb90cc593f2 297 Gene3D G3DSA:3.40.190.290 92 279 6.8E-27 T 14-10-2018 PhaeoP54_02474 40866f7542d88dd08bd6bfb90cc593f2 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 6.8E-14 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PhaeoP54_02474 40866f7542d88dd08bd6bfb90cc593f2 297 SUPERFAMILY SSF53850 90 284 2.17E-28 T 14-10-2018 PhaeoP54_02474 40866f7542d88dd08bd6bfb90cc593f2 297 SUPERFAMILY SSF46785 2 113 4.99E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_02474 40866f7542d88dd08bd6bfb90cc593f2 297 Pfam PF03466 LysR substrate binding domain 89 279 4.3E-25 T 14-10-2018 IPR005119 LysR, substrate-binding PhaeoP54_02474 40866f7542d88dd08bd6bfb90cc593f2 297 Gene3D G3DSA:1.10.10.10 1 85 1.1E-13 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_00160 bd6c8bc0c89bd98d324fdd1cd918566d 306 SUPERFAMILY SSF56349 99 304 5.89E-25 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 PhaeoP54_00160 bd6c8bc0c89bd98d324fdd1cd918566d 306 Gene3D G3DSA:1.10.150.130 92 199 1.3E-10 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal PhaeoP54_00160 bd6c8bc0c89bd98d324fdd1cd918566d 306 Gene3D G3DSA:1.10.443.10 208 306 4.9E-7 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 PhaeoP54_00660 ea6fb615c031c94aeb28e9ec8a8ed520 105 Pfam PF06844 Protein of unknown function (DUF1244) 28 93 4.4E-35 T 14-10-2018 IPR023163 SMc04008-like domain PhaeoP54_00660 ea6fb615c031c94aeb28e9ec8a8ed520 105 SUPERFAMILY SSF158757 1 78 4.05E-36 T 14-10-2018 IPR036810 SMc04008-like superfamily PhaeoP54_00660 ea6fb615c031c94aeb28e9ec8a8ed520 105 Gene3D G3DSA:1.10.3340.10 1 100 5.9E-41 T 14-10-2018 IPR036810 SMc04008-like superfamily PhaeoP54_02994 75fb4986cef6ecfca814714a9e0a46bd 410 Gene3D G3DSA:1.10.3720.10 195 406 4.3E-29 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_02994 75fb4986cef6ecfca814714a9e0a46bd 410 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 89 151 3.6E-13 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 PhaeoP54_02994 75fb4986cef6ecfca814714a9e0a46bd 410 SUPERFAMILY SSF161098 90 389 5.98E-31 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_02994 75fb4986cef6ecfca814714a9e0a46bd 410 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 247 400 5.7E-12 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PhaeoP54_00217 6987139670eab6de8fdc80a4cb3e17e8 644 Pfam PF08298 PrkA AAA domain 20 381 2.2E-174 T 14-10-2018 IPR013153 PrkA AAA domain PhaeoP54_00217 6987139670eab6de8fdc80a4cb3e17e8 644 Pfam PF06798 PrkA serine protein kinase C-terminal domain 384 636 6.4E-73 T 14-10-2018 IPR010650 PrkA C-terminal domain PhaeoP54_00217 6987139670eab6de8fdc80a4cb3e17e8 644 PIRSF PIRSF000549 1 644 4.7E-280 T 14-10-2018 IPR016230 Serine-protein kinase, PrkA GO:0004672 PhaeoP54_00217 6987139670eab6de8fdc80a4cb3e17e8 644 SUPERFAMILY SSF52540 76 350 1.64E-14 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_00217 6987139670eab6de8fdc80a4cb3e17e8 644 SMART SM00763 20 381 1.8E-197 T 14-10-2018 IPR013153 PrkA AAA domain PhaeoP54_00040 9556b057a1962f8c8c62c8880a6f66eb 314 Gene3D G3DSA:3.40.190.10 125 242 8.8E-46 T 14-10-2018 PhaeoP54_00040 9556b057a1962f8c8c62c8880a6f66eb 314 Gene3D G3DSA:3.40.190.150 27 307 8.8E-46 T 14-10-2018 PhaeoP54_00040 9556b057a1962f8c8c62c8880a6f66eb 314 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 47 305 3.9E-18 T 14-10-2018 IPR005064 Bordetella uptake gene GO:0030288 PhaeoP54_03678 351c86eab4e073f091eaf8c35667f980 269 SUPERFAMILY SSF161098 61 245 7.85E-13 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_03678 351c86eab4e073f091eaf8c35667f980 269 Gene3D G3DSA:1.10.3720.10 56 263 1.0E-7 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_00315 ab8ec920110e471a5ad61336d321af5f 309 Pfam PF04116 Fatty acid hydroxylase superfamily 87 221 5.6E-28 T 14-10-2018 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0008610|GO:0016491|GO:0055114 PhaeoP54_03192 455c2fb0950bd516151e1c085d254154 586 Gene3D G3DSA:1.10.3720.10 328 586 6.4E-28 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_03192 455c2fb0950bd516151e1c085d254154 586 Gene3D G3DSA:1.10.3720.10 50 313 2.0E-45 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_03192 455c2fb0950bd516151e1c085d254154 586 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 296 1.1E-9 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PhaeoP54_03192 455c2fb0950bd516151e1c085d254154 586 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 399 573 3.1E-7 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PhaeoP54_03192 455c2fb0950bd516151e1c085d254154 586 SUPERFAMILY SSF161098 331 581 1.68E-35 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_03192 455c2fb0950bd516151e1c085d254154 586 SUPERFAMILY SSF161098 46 300 2.09E-40 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_03709 eef17dfffcba7dedec28104de9f3d66f 210 SUPERFAMILY SSF56349 24 207 1.18E-29 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 PhaeoP54_03709 eef17dfffcba7dedec28104de9f3d66f 210 Pfam PF00589 Phage integrase family 44 195 5.9E-15 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 PhaeoP54_03709 eef17dfffcba7dedec28104de9f3d66f 210 Gene3D G3DSA:1.10.443.10 23 196 1.5E-21 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 PhaeoP54_00473 df7b3adbed2556f77a929f04cc470b6f 361 Pfam PF00970 Oxidoreductase FAD-binding domain 29 117 1.4E-6 T 14-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 PhaeoP54_00473 df7b3adbed2556f77a929f04cc470b6f 361 SUPERFAMILY SSF63380 17 117 9.75E-21 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel PhaeoP54_00473 df7b3adbed2556f77a929f04cc470b6f 361 SUPERFAMILY SSF54292 244 361 1.97E-27 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 PhaeoP54_00473 df7b3adbed2556f77a929f04cc470b6f 361 Gene3D G3DSA:3.40.50.80 120 259 8.9E-31 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain PhaeoP54_00473 df7b3adbed2556f77a929f04cc470b6f 361 Gene3D G3DSA:2.40.30.10 13 118 3.0E-19 T 14-10-2018 PhaeoP54_00473 df7b3adbed2556f77a929f04cc470b6f 361 Pfam PF00175 Oxidoreductase NAD-binding domain 129 235 1.2E-13 T 14-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 PhaeoP54_00473 df7b3adbed2556f77a929f04cc470b6f 361 SUPERFAMILY SSF52343 124 255 1.57E-36 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain PhaeoP54_00473 df7b3adbed2556f77a929f04cc470b6f 361 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 286 351 7.2E-11 T 14-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 PhaeoP54_00473 df7b3adbed2556f77a929f04cc470b6f 361 PRINTS PR00410 Phenol hydroxylase reductase family signature 221 229 2.0E-9 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 PhaeoP54_00473 df7b3adbed2556f77a929f04cc470b6f 361 PRINTS PR00410 Phenol hydroxylase reductase family signature 112 121 2.0E-9 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 PhaeoP54_00473 df7b3adbed2556f77a929f04cc470b6f 361 PRINTS PR00410 Phenol hydroxylase reductase family signature 46 58 2.0E-9 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 PhaeoP54_00473 df7b3adbed2556f77a929f04cc470b6f 361 PRINTS PR00410 Phenol hydroxylase reductase family signature 128 147 2.0E-9 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 PhaeoP54_00473 df7b3adbed2556f77a929f04cc470b6f 361 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 311 319 - T 14-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 PhaeoP54_00473 df7b3adbed2556f77a929f04cc470b6f 361 Gene3D G3DSA:3.10.20.30 260 361 3.3E-22 T 14-10-2018 IPR012675 Beta-grasp domain superfamily PhaeoP54_01412 c40fa2479510375b228dd471bf460ee2 262 Pfam PF06230 Protein of unknown function (DUF1009) 48 258 1.2E-61 T 14-10-2018 IPR010415 Protein of unknown function DUF1009 KEGG: 00540+3.6.1.54 PhaeoP54_01412 c40fa2479510375b228dd471bf460ee2 262 Gene3D G3DSA:3.40.50.20 1 122 5.9E-29 T 14-10-2018 PhaeoP54_01412 c40fa2479510375b228dd471bf460ee2 262 Gene3D G3DSA:3.40.140.80 123 261 1.3E-42 T 14-10-2018 PhaeoP54_01870 60705dfc9c4e4e1fdbba9877c949cf35 584 SUPERFAMILY SSF52091 455 569 1.18E-19 T 14-10-2018 IPR036513 STAS domain superfamily PhaeoP54_01870 60705dfc9c4e4e1fdbba9877c949cf35 584 Pfam PF01740 STAS domain 458 564 4.8E-21 T 14-10-2018 IPR002645 STAS domain PhaeoP54_01870 60705dfc9c4e4e1fdbba9877c949cf35 584 TIGRFAM TIGR00815 sulP: sulfate permease 10 553 1.9E-137 T 14-10-2018 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 PhaeoP54_01870 60705dfc9c4e4e1fdbba9877c949cf35 584 Gene3D G3DSA:3.30.750.24 436 570 1.5E-31 T 14-10-2018 IPR036513 STAS domain superfamily PhaeoP54_01870 60705dfc9c4e4e1fdbba9877c949cf35 584 Pfam PF00916 Sulfate permease family 23 405 1.0E-102 T 14-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 PhaeoP54_01599 bab6b3f115244d67dbd2702d20205220 819 Pfam PF02687 FtsX-like permease family 269 363 5.0E-6 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 PhaeoP54_01599 bab6b3f115244d67dbd2702d20205220 819 Pfam PF02687 FtsX-like permease family 721 808 7.1E-10 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 PhaeoP54_02447 afbd3edf290903e1703047d12cb870ea 457 SUPERFAMILY SSF161098 243 435 9.42E-36 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_02447 afbd3edf290903e1703047d12cb870ea 457 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 263 444 1.3E-19 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PhaeoP54_02447 afbd3edf290903e1703047d12cb870ea 457 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 243 341 3.9E-18 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 PhaeoP54_02447 afbd3edf290903e1703047d12cb870ea 457 Gene3D G3DSA:1.10.3720.10 235 450 5.5E-42 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_03887 79e065ed295735fc9be120f9bdf9d7bf 523 Hamap MF_01148 Apolipoprotein N-acyltransferase [lnt]. 15 496 21.169 T 14-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 PhaeoP54_03887 79e065ed295735fc9be120f9bdf9d7bf 523 Gene3D G3DSA:3.60.110.10 244 481 1.4E-19 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily PhaeoP54_03887 79e065ed295735fc9be120f9bdf9d7bf 523 TIGRFAM TIGR00546 lnt: apolipoprotein N-acyltransferase 68 459 1.7E-91 T 14-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 PhaeoP54_03887 79e065ed295735fc9be120f9bdf9d7bf 523 Pfam PF00795 Carbon-nitrogen hydrolase 250 478 4.4E-27 T 14-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 PhaeoP54_03887 79e065ed295735fc9be120f9bdf9d7bf 523 SUPERFAMILY SSF56317 233 491 2.75E-49 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily PhaeoP54_00500 3f69904b48f65435a6b34f7e99a208a1 405 Gene3D G3DSA:3.40.50.2000 207 383 1.9E-55 T 14-10-2018 PhaeoP54_00500 3f69904b48f65435a6b34f7e99a208a1 405 Gene3D G3DSA:3.40.50.2000 110 206 1.9E-55 T 14-10-2018 PhaeoP54_00500 3f69904b48f65435a6b34f7e99a208a1 405 Pfam PF00534 Glycosyl transferases group 1 216 377 5.3E-34 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 PhaeoP54_00500 3f69904b48f65435a6b34f7e99a208a1 405 SUPERFAMILY SSF53756 18 400 4.32E-69 T 14-10-2018 PhaeoP54_03215 55b9ccd4d6afd125197433188844827f 282 SUPERFAMILY SSF52540 24 238 2.37E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_03215 55b9ccd4d6afd125197433188844827f 282 Gene3D G3DSA:3.40.50.300 14 270 1.9E-66 T 14-10-2018 PhaeoP54_03215 55b9ccd4d6afd125197433188844827f 282 ProSitePatterns PS00211 ABC transporters family signature. 160 174 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PhaeoP54_03215 55b9ccd4d6afd125197433188844827f 282 Pfam PF00005 ABC transporter 44 188 7.7E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PhaeoP54_03215 55b9ccd4d6afd125197433188844827f 282 SMART SM00382 51 236 9.5E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_02115 3258762f39121e29172dac8a5fd2557e 153 Gene3D G3DSA:3.40.140.10 3 152 3.3E-50 T 14-10-2018 PhaeoP54_02115 3258762f39121e29172dac8a5fd2557e 153 Pfam PF14437 MafB19-like deaminase 7 107 2.9E-25 T 14-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 PhaeoP54_02115 3258762f39121e29172dac8a5fd2557e 153 SUPERFAMILY SSF53927 4 149 4.91E-47 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 PhaeoP54_02115 3258762f39121e29172dac8a5fd2557e 153 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 53 90 - T 14-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 PhaeoP54_02115 3258762f39121e29172dac8a5fd2557e 153 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 7 149 43.07 T 14-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 PhaeoP54_02085 f82281cfb8d4d2f5125d95ecd3b94735 286 SUPERFAMILY SSF103481 173 269 4.84E-13 T 14-10-2018 PhaeoP54_02085 f82281cfb8d4d2f5125d95ecd3b94735 286 SUPERFAMILY SSF103481 30 132 4.45E-17 T 14-10-2018 PhaeoP54_02085 f82281cfb8d4d2f5125d95ecd3b94735 286 Pfam PF00892 EamA-like transporter family 2 127 6.8E-17 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 PhaeoP54_02085 f82281cfb8d4d2f5125d95ecd3b94735 286 Pfam PF00892 EamA-like transporter family 137 266 9.9E-10 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 PhaeoP54_02567 49b4cc7da2adcf6e6c5ec116e27214cc 201 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 9 189 1.4E-37 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 PhaeoP54_02567 49b4cc7da2adcf6e6c5ec116e27214cc 201 SMART SM00855 8 156 1.1E-6 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 PhaeoP54_02567 49b4cc7da2adcf6e6c5ec116e27214cc 201 Gene3D G3DSA:3.40.50.1240 6 195 2.3E-36 T 14-10-2018 IPR029033 Histidine phosphatase superfamily PhaeoP54_02567 49b4cc7da2adcf6e6c5ec116e27214cc 201 SUPERFAMILY SSF53254 7 189 2.1E-40 T 14-10-2018 IPR029033 Histidine phosphatase superfamily PhaeoP54_02567 49b4cc7da2adcf6e6c5ec116e27214cc 201 PIRSF PIRSF000709 10 154 0.0039 T 14-10-2018 PhaeoP54_02646 67b69c17ef1bff28d31fca7ec07204d1 375 SUPERFAMILY SSF51726 4 372 2.22E-66 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 PhaeoP54_02646 67b69c17ef1bff28d31fca7ec07204d1 375 Gene3D G3DSA:3.20.20.210 1 374 1.3E-87 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 PhaeoP54_02646 67b69c17ef1bff28d31fca7ec07204d1 375 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 167 345 4.7E-6 T 14-10-2018 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 PhaeoP54_02646 67b69c17ef1bff28d31fca7ec07204d1 375 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 3 64 1.7E-4 T 14-10-2018 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 PhaeoP54_04009 3d90d357055ffd7ba675d8934ddc8792 298 Pfam PF08401 Domain of unknown function (DUF1738) 5 124 9.4E-36 T 14-10-2018 IPR013610 Domain of unknown function DUF1738 PhaeoP54_04009 3d90d357055ffd7ba675d8934ddc8792 298 PIRSF PIRSF037112 1 298 9.3E-107 T 14-10-2018 IPR017113 Antirestriction, ArdC PhaeoP54_03579 2bbcbb4f69a96fb3d1e9b8de8443f40b 525 Pfam PF13403 Hint domain 334 471 1.3E-47 T 14-10-2018 IPR028992 Hedgehog/Intein (Hint) domain PhaeoP54_03579 2bbcbb4f69a96fb3d1e9b8de8443f40b 525 SUPERFAMILY SSF51294 335 472 3.73E-21 T 14-10-2018 IPR036844 Hint domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 PhaeoP54_02370 09f250a4e36b4102657e2027a7012e9f 74 Pfam PF04325 Protein of unknown function (DUF465) 23 64 5.5E-14 T 14-10-2018 IPR007420 Protein of unknown function DUF465 PhaeoP54_02370 09f250a4e36b4102657e2027a7012e9f 74 Gene3D G3DSA:1.20.58.660 9 68 3.4E-6 T 14-10-2018 PhaeoP54_00117 26255de898c208bed04f91fb9b8ebba9 216 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 92 112 - T 14-10-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 PhaeoP54_00117 26255de898c208bed04f91fb9b8ebba9 216 SUPERFAMILY SSF53056 7 215 2.09E-55 T 14-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 PhaeoP54_00117 26255de898c208bed04f91fb9b8ebba9 216 SMART SM00947 35 207 3.6E-59 T 14-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 PhaeoP54_00117 26255de898c208bed04f91fb9b8ebba9 216 Pfam PF00484 Carbonic anhydrase 42 201 3.6E-44 T 14-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 PhaeoP54_00117 26255de898c208bed04f91fb9b8ebba9 216 Gene3D G3DSA:3.40.1050.10 4 214 2.8E-60 T 14-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 PhaeoP54_00751 46ea9eb5ae16c6e69c1b303ccd9fb810 450 Gene3D G3DSA:3.40.190.10 67 395 4.9E-42 T 14-10-2018 PhaeoP54_00751 46ea9eb5ae16c6e69c1b303ccd9fb810 450 Gene3D G3DSA:3.40.190.10 169 425 4.9E-42 T 14-10-2018 PhaeoP54_00751 46ea9eb5ae16c6e69c1b303ccd9fb810 450 SUPERFAMILY SSF53850 48 449 1.28E-43 T 14-10-2018 PhaeoP54_00751 46ea9eb5ae16c6e69c1b303ccd9fb810 450 Pfam PF13416 Bacterial extracellular solute-binding protein 69 385 1.1E-12 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein PhaeoP54_00515 5193d41b73e6739edc412552d7edc08f 410 Pfam PF06181 Urate oxidase N-terminal 6 298 1.2E-131 T 14-10-2018 IPR010389 Urate oxidase N-terminal PhaeoP54_00515 5193d41b73e6739edc412552d7edc08f 410 SUPERFAMILY SSF46626 289 407 1.47E-5 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PhaeoP54_02693 b532157936ca534351ec5b298df357ce 300 SUPERFAMILY SSF53067 124 288 1.37E-33 T 14-10-2018 PhaeoP54_02693 b532157936ca534351ec5b298df357ce 300 Gene3D G3DSA:3.30.420.40 120 266 2.2E-53 T 14-10-2018 PhaeoP54_02693 b532157936ca534351ec5b298df357ce 300 SUPERFAMILY SSF53067 7 116 1.62E-12 T 14-10-2018 PhaeoP54_02693 b532157936ca534351ec5b298df357ce 300 Gene3D G3DSA:3.30.420.40 8 119 2.2E-53 T 14-10-2018 PhaeoP54_02693 b532157936ca534351ec5b298df357ce 300 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 12 264 1.1E-12 T 14-10-2018 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type Reactome: R-HSA-446210 PhaeoP54_00761 517a9505d306f04ed0fd01d38ac21346 505 Pfam PF01970 Tripartite tricarboxylate transporter TctA family 18 441 1.9E-128 T 14-10-2018 IPR002823 Protein of unknown function DUF112, transmembrane PhaeoP54_02443 cd26c2d9391d5ec31d62b50858543bda 271 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 85 259 2.9E-15 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PhaeoP54_02443 cd26c2d9391d5ec31d62b50858543bda 271 Gene3D G3DSA:1.10.3720.10 58 264 2.0E-10 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_02443 cd26c2d9391d5ec31d62b50858543bda 271 SUPERFAMILY SSF161098 64 251 1.83E-14 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_02804 2c1e5109021bc8f53020d5511eb9d4a1 289 SUPERFAMILY SSF103481 40 135 1.57E-10 T 14-10-2018 PhaeoP54_02804 2c1e5109021bc8f53020d5511eb9d4a1 289 SUPERFAMILY SSF103481 176 274 9.81E-15 T 14-10-2018 PhaeoP54_02804 2c1e5109021bc8f53020d5511eb9d4a1 289 Pfam PF00892 EamA-like transporter family 142 274 9.9E-23 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 PhaeoP54_02804 2c1e5109021bc8f53020d5511eb9d4a1 289 Pfam PF00892 EamA-like transporter family 7 132 1.7E-14 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 PhaeoP54_00068 30ab7ef6492f2439675f4e92665e7a4c 154 Gene3D G3DSA:1.10.760.10 19 152 5.4E-40 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PhaeoP54_00068 30ab7ef6492f2439675f4e92665e7a4c 154 SUPERFAMILY SSF46626 20 132 9.92E-29 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PhaeoP54_03122 36a0a95f098c67a86735a78e19c63ee9 186 Hamap MF_01398 ATP synthase subunit b [atpF]. 24 163 11.537 T 14-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 PhaeoP54_03122 36a0a95f098c67a86735a78e19c63ee9 186 Pfam PF00430 ATP synthase B/B' CF(0) 32 161 2.4E-24 T 14-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 PhaeoP54_01439 e84226b263d09b42194200772f54263c 161 Pfam PF00380 Ribosomal protein S9/S16 41 161 1.3E-46 T 14-10-2018 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 PhaeoP54_01439 e84226b263d09b42194200772f54263c 161 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 32 161 32.974 T 14-10-2018 IPR023035 Ribosomal protein S9, bacterial/plastid PhaeoP54_01439 e84226b263d09b42194200772f54263c 161 Gene3D G3DSA:3.30.230.10 33 161 1.2E-50 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PhaeoP54_01439 e84226b263d09b42194200772f54263c 161 SUPERFAMILY SSF54211 36 161 4.55E-47 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold PhaeoP54_01439 e84226b263d09b42194200772f54263c 161 ProSitePatterns PS00360 Ribosomal protein S9 signature. 100 118 - T 14-10-2018 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 PhaeoP54_04049 09fbcef65f6ef47b1d5f5606a18e5e4c 258 SUPERFAMILY SSF52540 35 188 6.13E-9 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_04049 09fbcef65f6ef47b1d5f5606a18e5e4c 258 Pfam PF03567 Sulfotransferase family 32 219 1.9E-10 T 14-10-2018 IPR005331 Sulfotransferase GO:0008146|GO:0016021 PhaeoP54_04049 09fbcef65f6ef47b1d5f5606a18e5e4c 258 Gene3D G3DSA:3.40.50.300 34 159 3.9E-8 T 14-10-2018 PhaeoP54_00972 8d5ad4d5c4c94760db0c909405b6d6ae 153 Pfam PF04191 Phospholipid methyltransferase 45 139 5.3E-12 T 14-10-2018 IPR007318 Phospholipid methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825|Reactome: R-HSA-1483191 PhaeoP54_00972 8d5ad4d5c4c94760db0c909405b6d6ae 153 Gene3D G3DSA:1.20.120.1630 6 153 1.8E-20 T 14-10-2018 PhaeoP54_00972 8d5ad4d5c4c94760db0c909405b6d6ae 153 ProDom PD049902 METHYLTRANSFERASE TRANSFERASE PRECURSOR ISOPRENYLCYSTEINE SIGNAL CARBOXYL TRANSMEMBRANE MEMBRANE FAMILY XCC3183 111 153 5.0E-14 T 14-10-2018 PhaeoP54_01623 a0ad1dfdc35f3812fa30c391d799e1e9 348 SUPERFAMILY SSF51735 11 345 3.15E-99 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PhaeoP54_01623 a0ad1dfdc35f3812fa30c391d799e1e9 348 Gene3D G3DSA:3.30.1780.10 25 340 3.7E-124 T 14-10-2018 IPR023401 Ornithine cyclodeaminase, N-terminal Reactome: R-HSA-71064 PhaeoP54_01623 a0ad1dfdc35f3812fa30c391d799e1e9 348 Pfam PF02423 Ornithine cyclodeaminase/mu-crystallin family 16 321 1.8E-119 T 14-10-2018 IPR003462 Ornithine cyclodeaminase/mu-crystallin Reactome: R-HSA-71064 PhaeoP54_01623 a0ad1dfdc35f3812fa30c391d799e1e9 348 Gene3D G3DSA:3.40.50.720 134 302 3.7E-124 T 14-10-2018 PhaeoP54_02781 fb936987f55cb47eafa509f85670374d 248 Pfam PF01925 Sulfite exporter TauE/SafE 16 240 1.9E-10 T 14-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 PhaeoP54_03902 2a6dd18c8e798a0f9e9ea4b6d807d949 456 Gene3D G3DSA:3.40.50.300 131 443 4.3E-50 T 14-10-2018 PhaeoP54_03902 2a6dd18c8e798a0f9e9ea4b6d807d949 456 SUPERFAMILY SSF52540 131 391 2.38E-36 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_03902 2a6dd18c8e798a0f9e9ea4b6d807d949 456 Pfam PF13614 AAA domain 132 326 3.3E-32 T 14-10-2018 IPR025669 AAA domain PhaeoP54_03867 de94479dd44d9ff952ab681402f8db9d 206 Pfam PF01464 Transglycosylase SLT domain 93 188 1.9E-17 T 14-10-2018 IPR008258 Transglycosylase SLT domain 1 PhaeoP54_03867 de94479dd44d9ff952ab681402f8db9d 206 Gene3D G3DSA:1.10.530.10 88 205 3.1E-30 T 14-10-2018 PhaeoP54_03867 de94479dd44d9ff952ab681402f8db9d 206 SUPERFAMILY SSF53955 96 202 2.16E-34 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily PhaeoP54_03322 e3f4b0e79c22738a50fe4eb5fd8ecb00 408 Pfam PF06224 Winged helix DNA-binding domain 38 391 3.5E-75 T 14-10-2018 IPR009351 Protein of unknown function DUF1006 PhaeoP54_01536 9ebd725b00e843d8e651383005fc41d9 89 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 84 26.981 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PhaeoP54_01536 9ebd725b00e843d8e651383005fc41d9 89 Gene3D G3DSA:2.40.50.100 21 89 9.6E-29 T 14-10-2018 PhaeoP54_01536 9ebd725b00e843d8e651383005fc41d9 89 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 81 5.8E-35 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PhaeoP54_01536 9ebd725b00e843d8e651383005fc41d9 89 Pfam PF01016 Ribosomal L27 protein 2 81 5.2E-36 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PhaeoP54_01536 9ebd725b00e843d8e651383005fc41d9 89 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 70 5.0E-16 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PhaeoP54_01536 9ebd725b00e843d8e651383005fc41d9 89 SUPERFAMILY SSF110324 2 83 6.98E-33 T 14-10-2018 PhaeoP54_01536 9ebd725b00e843d8e651383005fc41d9 89 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 14-10-2018 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 PhaeoP54_01536 9ebd725b00e843d8e651383005fc41d9 89 PRINTS PR00063 Ribosomal protein L27 signature 54 78 1.7E-33 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PhaeoP54_01536 9ebd725b00e843d8e651383005fc41d9 89 PRINTS PR00063 Ribosomal protein L27 signature 4 28 1.7E-33 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PhaeoP54_01536 9ebd725b00e843d8e651383005fc41d9 89 PRINTS PR00063 Ribosomal protein L27 signature 29 53 1.7E-33 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PhaeoP54_01002 31257bb4b8a1fe037e2c65c81a67a7d7 534 Pfam PF01039 Carboxyl transferase domain 48 524 1.9E-146 T 14-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 PhaeoP54_01002 31257bb4b8a1fe037e2c65c81a67a7d7 534 SUPERFAMILY SSF52096 29 265 1.14E-70 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily PhaeoP54_01002 31257bb4b8a1fe037e2c65c81a67a7d7 534 Gene3D G3DSA:3.90.226.10 1 270 2.9E-93 T 14-10-2018 PhaeoP54_01002 31257bb4b8a1fe037e2c65c81a67a7d7 534 Gene3D G3DSA:3.90.226.10 274 534 1.7E-97 T 14-10-2018 PhaeoP54_01002 31257bb4b8a1fe037e2c65c81a67a7d7 534 SUPERFAMILY SSF52096 236 516 3.65E-82 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily PhaeoP54_03432 05ee304dfa752915ae89034218d42cdc 237 Gene3D G3DSA:3.40.50.300 47 205 3.6E-10 T 14-10-2018 PhaeoP54_03432 05ee304dfa752915ae89034218d42cdc 237 SUPERFAMILY SSF52540 6 180 3.51E-20 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_00952 42f8c3bf5144f0993584c7a23900019f 84 Pfam PF01722 BolA-like protein 11 81 4.9E-21 T 14-10-2018 IPR002634 BolA protein PhaeoP54_00952 42f8c3bf5144f0993584c7a23900019f 84 PIRSF PIRSF003113 1 83 3.9E-22 T 14-10-2018 IPR002634 BolA protein PhaeoP54_00952 42f8c3bf5144f0993584c7a23900019f 84 Gene3D G3DSA:3.30.300.90 2 84 5.3E-22 T 14-10-2018 PhaeoP54_00952 42f8c3bf5144f0993584c7a23900019f 84 SUPERFAMILY SSF82657 1 80 1.96E-20 T 14-10-2018 IPR036065 BolA-like superfamily PhaeoP54_01915 94a91dbfe921332f3dae9ce44e701c7c 450 PIRSF PIRSF000390 14 441 7.6E-95 T 14-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase PhaeoP54_01915 94a91dbfe921332f3dae9ce44e701c7c 450 Gene3D G3DSA:3.90.1150.10 309 441 1.2E-40 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 PhaeoP54_01915 94a91dbfe921332f3dae9ce44e701c7c 450 Gene3D G3DSA:3.40.640.10 5 308 6.9E-89 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PhaeoP54_01915 94a91dbfe921332f3dae9ce44e701c7c 450 SUPERFAMILY SSF53383 32 439 7.09E-86 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PhaeoP54_01915 94a91dbfe921332f3dae9ce44e701c7c 450 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 53 434 2.4E-86 T 14-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase PhaeoP54_02361 448b95666dd32d3d2403055714c306f7 258 Pfam PF13403 Hint domain 68 214 4.0E-29 T 14-10-2018 IPR028992 Hedgehog/Intein (Hint) domain PhaeoP54_00717 394d690adb5bad164a37b55b504ffe42 121 SUPERFAMILY SSF55174 4 87 3.66E-23 T 14-10-2018 PhaeoP54_00717 394d690adb5bad164a37b55b504ffe42 121 Pfam PF01479 S4 domain 6 52 2.9E-12 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PhaeoP54_00717 394d690adb5bad164a37b55b504ffe42 121 Gene3D G3DSA:3.10.290.10 1 97 4.0E-34 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 PhaeoP54_00717 394d690adb5bad164a37b55b504ffe42 121 SMART SM00363 5 65 3.2E-9 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PhaeoP54_02021 9ba2f0946ce51d731da0208976089074 200 Pfam PF06684 Amino acid synthesis 5 181 1.1E-64 T 14-10-2018 IPR009569 Amino acid synthesis, putative PhaeoP54_02021 9ba2f0946ce51d731da0208976089074 200 SUPERFAMILY SSF160519 1 194 6.8E-70 T 14-10-2018 IPR035936 BB2672 superfamily PhaeoP54_02021 9ba2f0946ce51d731da0208976089074 200 Gene3D G3DSA:3.30.1330.110 2 192 8.6E-64 T 14-10-2018 IPR035936 BB2672 superfamily PhaeoP54_01252 a17f90105dc3d3129b6c6fa9b7ca6c3b 460 Gene3D G3DSA:2.30.330.10 213 302 5.6E-6 T 14-10-2018 IPR036429 SpoA-like superfamily PhaeoP54_01252 a17f90105dc3d3129b6c6fa9b7ca6c3b 460 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 229 296 1.5E-13 T 14-10-2018 IPR001543 Surface presentation of antigen (SpoA) PhaeoP54_01252 a17f90105dc3d3129b6c6fa9b7ca6c3b 460 SUPERFAMILY SSF101801 227 296 1.83E-10 T 14-10-2018 IPR036429 SpoA-like superfamily PhaeoP54_01244 9618b58f0830c6e709a113d57c576d95 251 Gene3D G3DSA:3.40.50.300 1 249 3.2E-58 T 14-10-2018 PhaeoP54_01244 9618b58f0830c6e709a113d57c576d95 251 Pfam PF00005 ABC transporter 19 177 3.9E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PhaeoP54_01244 9618b58f0830c6e709a113d57c576d95 251 SUPERFAMILY SSF52540 3 248 5.76E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_01244 9618b58f0830c6e709a113d57c576d95 251 SMART SM00382 28 226 2.0E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_00928 9d7ad551e16fe49a4dacdfaa6b2246b3 97 SUPERFAMILY SSF54909 5 96 1.4E-23 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel PhaeoP54_00928 9d7ad551e16fe49a4dacdfaa6b2246b3 97 Pfam PF03992 Antibiotic biosynthesis monooxygenase 7 74 5.1E-13 T 14-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain PhaeoP54_00928 9d7ad551e16fe49a4dacdfaa6b2246b3 97 Gene3D G3DSA:3.30.70.100 1 97 8.0E-25 T 14-10-2018 PhaeoP54_00777 1df53eb930a5487458af6fdfefc79609 125 Pfam PF01890 Cobalamin synthesis G C-terminus 3 120 8.4E-16 T 14-10-2018 IPR002750 CobE/GbiG C-terminal domain GO:0009236 PhaeoP54_00777 1df53eb930a5487458af6fdfefc79609 125 Gene3D G3DSA:3.30.420.180 1 122 4.8E-20 T 14-10-2018 IPR036518 CobE/GbiG C-terminal domain superfamily GO:0009236 PhaeoP54_00777 1df53eb930a5487458af6fdfefc79609 125 SUPERFAMILY SSF159664 2 121 1.14E-20 T 14-10-2018 IPR036518 CobE/GbiG C-terminal domain superfamily GO:0009236 PhaeoP54_02117 a67623cbcc855e8fb2386acd29605f4d 305 Pfam PF10112 5-bromo-4-chloroindolyl phosphate hydrolysis protein 112 291 1.6E-26 T 14-10-2018 IPR018770 5-bromo-4-chloroindolyl phosphate hydrolysis protein PhaeoP54_02518 0ccb4e0e47f0806bb110e64da806ed83 761 SUPERFAMILY SSF51126 173 697 1.71E-53 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor PhaeoP54_02518 0ccb4e0e47f0806bb110e64da806ed83 761 Pfam PF12708 Pectate lyase superfamily protein 189 245 2.1E-8 T 14-10-2018 IPR024535 Pectate lyase superfamily protein PhaeoP54_00120 78418564f9b486f81df3c37a73f5d0e8 340 SUPERFAMILY SSF55347 129 320 3.57E-75 T 14-10-2018 PhaeoP54_00120 78418564f9b486f81df3c37a73f5d0e8 340 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 4 117 1.2E-30 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 PhaeoP54_00120 78418564f9b486f81df3c37a73f5d0e8 340 PIRSF PIRSF000148 2 337 4.9E-125 T 14-10-2018 PhaeoP54_00120 78418564f9b486f81df3c37a73f5d0e8 340 Gene3D G3DSA:3.30.360.10 128 316 8.7E-139 T 14-10-2018 PhaeoP54_00120 78418564f9b486f81df3c37a73f5d0e8 340 TIGRFAM TIGR01296 asd_B: aspartate-semialdehyde dehydrogenase 5 333 3.3E-139 T 14-10-2018 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 PhaeoP54_00120 78418564f9b486f81df3c37a73f5d0e8 340 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 139 319 1.7E-52 T 14-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 PhaeoP54_00120 78418564f9b486f81df3c37a73f5d0e8 340 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 2 333 35.685 T 14-10-2018 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 PhaeoP54_00120 78418564f9b486f81df3c37a73f5d0e8 340 Gene3D G3DSA:3.40.50.720 5 330 8.7E-139 T 14-10-2018 PhaeoP54_00120 78418564f9b486f81df3c37a73f5d0e8 340 SMART SM00859 4 119 1.7E-37 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 PhaeoP54_00120 78418564f9b486f81df3c37a73f5d0e8 340 SUPERFAMILY SSF51735 3 157 3.92E-52 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PhaeoP54_02044 2eaa2801ee0498d3f3f937cbf29427ad 244 PIRSF PIRSF028451 159 233 33.0 T 14-10-2018 IPR015996 Uncharacterised conserved protein UCP028451 PhaeoP54_02044 2eaa2801ee0498d3f3f937cbf29427ad 244 PIRSF PIRSF028451 4 138 6.7E-23 T 14-10-2018 IPR015996 Uncharacterised conserved protein UCP028451 PhaeoP54_02044 2eaa2801ee0498d3f3f937cbf29427ad 244 Pfam PF09365 Conserved hypothetical protein (DUF2461) 12 231 4.6E-51 T 14-10-2018 IPR012808 Conserved hypothetical protein CHP02453 PhaeoP54_02044 2eaa2801ee0498d3f3f937cbf29427ad 244 TIGRFAM TIGR02453 TIGR02453: TIGR02453 family protein 9 132 3.5E-31 T 14-10-2018 IPR012808 Conserved hypothetical protein CHP02453 PhaeoP54_01007 6bed24d813460ae67d902e793b3fb01f 121 Hamap MF_01394 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic [ndhC]. 4 121 19.437 T 14-10-2018 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid GO:0016651|GO:0055114 PhaeoP54_01007 6bed24d813460ae67d902e793b3fb01f 121 Gene3D G3DSA:1.20.58.1610 1 121 3.7E-43 T 14-10-2018 IPR038430 NADH:ubiquinone oxidoreductase, subunit 3 superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PhaeoP54_01007 6bed24d813460ae67d902e793b3fb01f 121 Pfam PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 23 120 7.8E-38 T 14-10-2018 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PhaeoP54_03839 c4c5901b97bd66a1be4772f287bec976 135 Pfam PF02411 MerT mercuric transport protein 30 131 2.4E-16 T 14-10-2018 IPR003457 Mercuric transport protein MerT GO:0015097|GO:0015694|GO:0016020 PhaeoP54_02641 7f01eb364b7e50391944222bb4de8da8 349 SUPERFAMILY SSF54427 29 156 5.4E-26 T 14-10-2018 IPR032710 NTF2-like domain superfamily PhaeoP54_02641 7f01eb364b7e50391944222bb4de8da8 349 Gene3D G3DSA:3.10.450.50 3 149 9.3E-23 T 14-10-2018 PhaeoP54_02641 7f01eb364b7e50391944222bb4de8da8 349 Pfam PF07366 SnoaL-like polyketide cyclase 205 322 7.7E-10 T 14-10-2018 IPR009959 Polyketide cyclase SnoaL-like GO:0030638 MetaCyc: PWY-7352|MetaCyc: PWY-7354 PhaeoP54_02641 7f01eb364b7e50391944222bb4de8da8 349 Pfam PF07366 SnoaL-like polyketide cyclase 37 143 4.8E-10 T 14-10-2018 IPR009959 Polyketide cyclase SnoaL-like GO:0030638 MetaCyc: PWY-7352|MetaCyc: PWY-7354 PhaeoP54_02641 7f01eb364b7e50391944222bb4de8da8 349 Gene3D G3DSA:3.10.450.50 197 330 2.3E-27 T 14-10-2018 PhaeoP54_02641 7f01eb364b7e50391944222bb4de8da8 349 SUPERFAMILY SSF54427 205 328 9.79E-26 T 14-10-2018 IPR032710 NTF2-like domain superfamily PhaeoP54_00789 ec97c3e32037bebe55d63cdf16644f1a 135 Gene3D G3DSA:3.10.180.10 21 135 6.1E-19 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PhaeoP54_00789 ec97c3e32037bebe55d63cdf16644f1a 135 SUPERFAMILY SSF54593 28 132 1.4E-14 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PhaeoP54_00592 ae604f4f91e375762a3777836ba38692 239 TIGRFAM TIGR02429 pcaI_scoA_fam: 3-oxoacid CoA-transferase, A subunit 1 222 3.0E-64 T 14-10-2018 IPR012792 3-oxoacid CoA-transferase, subunit A GO:0008410 Reactome: R-HSA-77108 PhaeoP54_00592 ae604f4f91e375762a3777836ba38692 239 Gene3D G3DSA:3.40.1080.10 1 223 2.1E-89 T 14-10-2018 PhaeoP54_00592 ae604f4f91e375762a3777836ba38692 239 ProSitePatterns PS01273 Coenzyme A transferases signature 1. 18 33 - T 14-10-2018 IPR004163 Coenzyme A transferase binding site GO:0008410 Reactome: R-HSA-77108 PhaeoP54_00592 ae604f4f91e375762a3777836ba38692 239 SUPERFAMILY SSF100950 2 234 3.86E-81 T 14-10-2018 IPR037171 NagB/RpiA transferase-like PhaeoP54_00592 ae604f4f91e375762a3777836ba38692 239 SMART SM00882 5 223 7.4E-81 T 14-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 PhaeoP54_00592 ae604f4f91e375762a3777836ba38692 239 Pfam PF01144 Coenzyme A transferase 7 222 1.2E-69 T 14-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 PhaeoP54_00826 23665612fdc32552c36ea6d2371cc7c0 519 Gene3D G3DSA:3.20.20.480 30 515 1.2E-155 T 14-10-2018 IPR038601 MttB-like superfamily KEGG: 00680+2.1.1.250|MetaCyc: PWY-5250 PhaeoP54_00826 23665612fdc32552c36ea6d2371cc7c0 519 Pfam PF06253 Trimethylamine methyltransferase (MTTB) 10 514 4.5E-225 T 14-10-2018 IPR010426 Trimethylamine methyltransferase GO:0008168|GO:0015948 KEGG: 00680+2.1.1.250|MetaCyc: PWY-5250 PhaeoP54_00826 23665612fdc32552c36ea6d2371cc7c0 519 PIRSF PIRSF037567 1 519 5.0E-182 T 14-10-2018 IPR010426 Trimethylamine methyltransferase GO:0008168|GO:0015948 KEGG: 00680+2.1.1.250|MetaCyc: PWY-5250 PhaeoP54_01275 f8ad33d62c8c871d94d93aa686f53f20 338 Gene3D G3DSA:3.40.190.170 29 336 3.9E-53 T 14-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily PhaeoP54_01275 f8ad33d62c8c871d94d93aa686f53f20 338 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 30 307 2.1E-26 T 14-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 PhaeoP54_02958 22fdc070da5d9d4f04036608b90900a0 219 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 1 216 8.8E-40 T 14-10-2018 PhaeoP54_02958 22fdc070da5d9d4f04036608b90900a0 219 Gene3D G3DSA:3.40.50.720 1 219 2.6E-55 T 14-10-2018 PhaeoP54_02958 22fdc070da5d9d4f04036608b90900a0 219 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 199 4.1E-20 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_02958 22fdc070da5d9d4f04036608b90900a0 219 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 59 70 4.1E-20 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_02958 22fdc070da5d9d4f04036608b90900a0 219 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 106 122 4.1E-20 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_02958 22fdc070da5d9d4f04036608b90900a0 219 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 170 4.1E-20 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_02958 22fdc070da5d9d4f04036608b90900a0 219 SUPERFAMILY SSF51735 1 216 5.98E-50 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PhaeoP54_04061 77be394bd9a93ed2c54891ab077744f0 296 SUPERFAMILY SSF53448 10 295 4.33E-88 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PhaeoP54_04061 77be394bd9a93ed2c54891ab077744f0 296 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 11 295 2.3E-141 T 14-10-2018 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|KEGG: 00525+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 PhaeoP54_04061 77be394bd9a93ed2c54891ab077744f0 296 Pfam PF00483 Nucleotidyl transferase 11 246 4.4E-64 T 14-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 PhaeoP54_04061 77be394bd9a93ed2c54891ab077744f0 296 Gene3D G3DSA:3.90.550.10 6 296 3.9E-84 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PhaeoP54_02405 405432f47adccf1fdcf5bff5f05d0a02 176 SUPERFAMILY SSF110857 1 127 1.96E-9 T 14-10-2018 IPR036568 Gamma-glutamyl cyclotransferase-like superfamily PhaeoP54_02405 405432f47adccf1fdcf5bff5f05d0a02 176 Pfam PF04752 ChaC-like protein 3 172 8.0E-48 T 14-10-2018 IPR006840 Glutathione-specific gamma-glutamylcyclotransferase GO:0003839|GO:0006751 KEGG: 00480+4.3.2.7|MetaCyc: PWY-7942|Reactome: R-HSA-174403 PhaeoP54_02405 405432f47adccf1fdcf5bff5f05d0a02 176 Gene3D G3DSA:3.10.490.10 1 174 8.4E-11 T 14-10-2018 PhaeoP54_01211 ec9c7a9bce19a6fe795e0b095367614a 507 SUPERFAMILY SSF74650 37 406 1.26E-152 T 14-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 PhaeoP54_01211 ec9c7a9bce19a6fe795e0b095367614a 507 Gene3D G3DSA:2.70.98.10 36 407 3.8E-154 T 14-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 PhaeoP54_01211 ec9c7a9bce19a6fe795e0b095367614a 507 Gene3D G3DSA:2.60.40.10 421 507 9.3E-9 T 14-10-2018 IPR013783 Immunoglobulin-like fold PhaeoP54_01211 ec9c7a9bce19a6fe795e0b095367614a 507 Pfam PF04349 Periplasmic glucan biosynthesis protein, MdoG 37 505 5.0E-181 T 14-10-2018 IPR007444 Glucan biosynthesis, periplasmic, MdoG C-terminal GO:0016051|GO:0042597 PhaeoP54_01211 ec9c7a9bce19a6fe795e0b095367614a 507 SUPERFAMILY SSF81296 408 506 1.82E-19 T 14-10-2018 IPR014756 Immunoglobulin E-set PhaeoP54_01211 ec9c7a9bce19a6fe795e0b095367614a 507 PIRSF PIRSF006281 2 507 6.1E-173 T 14-10-2018 IPR014438 Glucan biosynthesis protein MdoG/MdoD PhaeoP54_02429 21cbe7dc4a1ea75e774716c5b51eefb8 139 SUPERFAMILY SSF46458 15 121 4.89E-21 T 14-10-2018 IPR009050 Globin-like superfamily PhaeoP54_02429 21cbe7dc4a1ea75e774716c5b51eefb8 139 Gene3D G3DSA:1.10.490.10 13 129 1.1E-31 T 14-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 PhaeoP54_01729 7dbad658cff15d798c01823422e989c8 348 Gene3D G3DSA:3.90.226.40 1 348 4.7E-121 T 14-10-2018 PhaeoP54_01729 7dbad658cff15d798c01823422e989c8 348 Pfam PF16113 Enoyl-CoA hydratase/isomerase 13 331 1.6E-109 T 14-10-2018 IPR032259 Enoyl-CoA hydratase/isomerase, HIBYL-CoA-H type GO:0003860 Reactome: R-HSA-70895 PhaeoP54_01729 7dbad658cff15d798c01823422e989c8 348 SUPERFAMILY SSF52096 2 320 8.18E-64 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily PhaeoP54_01474 06724eb800e3aaa949176186d6d47697 290 SUPERFAMILY SSF48179 164 288 1.36E-41 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 PhaeoP54_01474 06724eb800e3aaa949176186d6d47697 290 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 166 285 7.6E-36 T 14-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 PhaeoP54_01474 06724eb800e3aaa949176186d6d47697 290 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 3 160 2.3E-47 T 14-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 PhaeoP54_01474 06724eb800e3aaa949176186d6d47697 290 Gene3D G3DSA:1.10.1040.10 164 289 7.1E-40 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 PhaeoP54_01474 06724eb800e3aaa949176186d6d47697 290 PIRSF PIRSF000103 1 289 1.9E-72 T 14-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 PhaeoP54_01474 06724eb800e3aaa949176186d6d47697 290 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 6 19 - T 14-10-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 PhaeoP54_01474 06724eb800e3aaa949176186d6d47697 290 Gene3D G3DSA:3.40.50.720 1 163 2.2E-49 T 14-10-2018 PhaeoP54_01474 06724eb800e3aaa949176186d6d47697 290 SUPERFAMILY SSF51735 2 164 1.14E-49 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PhaeoP54_01894 6cf7d1fdb65a56f12d011da546e9180d 322 SUPERFAMILY SSF52768 15 319 7.92E-87 T 14-10-2018 IPR023696 Ureohydrolase domain superfamily PhaeoP54_01894 6cf7d1fdb65a56f12d011da546e9180d 322 ProSitePatterns PS01053 Arginase family signature. 242 263 - T 14-10-2018 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 PhaeoP54_01894 6cf7d1fdb65a56f12d011da546e9180d 322 Pfam PF00491 Arginase family 47 311 1.4E-80 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 PhaeoP54_01894 6cf7d1fdb65a56f12d011da546e9180d 322 TIGRFAM TIGR01230 agmatinase: agmatinase 46 311 6.6E-60 T 14-10-2018 IPR005925 Agmatinase-related KEGG: 00330+3.5.3.11|MetaCyc: PWY-40|MetaCyc: PWY-6305|Reactome: R-HSA-351143 PhaeoP54_01894 6cf7d1fdb65a56f12d011da546e9180d 322 Gene3D G3DSA:3.40.800.10 4 319 1.4E-108 T 14-10-2018 PhaeoP54_01894 6cf7d1fdb65a56f12d011da546e9180d 322 PIRSF PIRSF036979 27 317 2.5E-83 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 PhaeoP54_03886 3719ce567b32e5d068388bf2dd43f949 157 Pfam PF01252 Signal peptidase (SPase) II 14 146 8.3E-32 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 PhaeoP54_03886 3719ce567b32e5d068388bf2dd43f949 157 TIGRFAM TIGR00077 lspA: signal peptidase II 9 151 2.2E-33 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 PhaeoP54_03886 3719ce567b32e5d068388bf2dd43f949 157 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 50 58 2.5E-14 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 PhaeoP54_03886 3719ce567b32e5d068388bf2dd43f949 157 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 93 108 2.5E-14 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 PhaeoP54_03886 3719ce567b32e5d068388bf2dd43f949 157 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 129 145 2.5E-14 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 PhaeoP54_03886 3719ce567b32e5d068388bf2dd43f949 157 ProSitePatterns PS00855 Signal peptidases II signature. 96 108 - T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 PhaeoP54_03886 3719ce567b32e5d068388bf2dd43f949 157 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 3 154 14.527 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 PhaeoP54_02633 3dfe35bd42851781409c060dc917e8c3 288 Gene3D G3DSA:3.20.20.140 1 288 5.9E-73 T 14-10-2018 PhaeoP54_02633 3dfe35bd42851781409c060dc917e8c3 288 Pfam PF04909 Amidohydrolase 2 288 1.1E-31 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 PhaeoP54_02633 3dfe35bd42851781409c060dc917e8c3 288 SUPERFAMILY SSF51556 2 288 1.3E-46 T 14-10-2018 IPR032466 Metal-dependent hydrolase PhaeoP54_01980 dd83c08de2b1a3f0d124e95160d0e4b2 394 SUPERFAMILY SSF48264 11 393 7.07E-81 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 PhaeoP54_01980 dd83c08de2b1a3f0d124e95160d0e4b2 394 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 339 348 - T 14-10-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 PhaeoP54_01980 dd83c08de2b1a3f0d124e95160d0e4b2 394 Pfam PF00067 Cytochrome P450 68 250 5.7E-7 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 PhaeoP54_01980 dd83c08de2b1a3f0d124e95160d0e4b2 394 Pfam PF00067 Cytochrome P450 272 367 1.2E-20 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 PhaeoP54_01980 dd83c08de2b1a3f0d124e95160d0e4b2 394 PRINTS PR00359 B-class P450 signature 149 164 2.8E-47 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 PhaeoP54_01980 dd83c08de2b1a3f0d124e95160d0e4b2 394 PRINTS PR00359 B-class P450 signature 132 148 2.8E-47 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 PhaeoP54_01980 dd83c08de2b1a3f0d124e95160d0e4b2 394 PRINTS PR00359 B-class P450 signature 346 357 2.8E-47 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 PhaeoP54_01980 dd83c08de2b1a3f0d124e95160d0e4b2 394 PRINTS PR00359 B-class P450 signature 271 282 2.8E-47 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 PhaeoP54_01980 dd83c08de2b1a3f0d124e95160d0e4b2 394 PRINTS PR00359 B-class P450 signature 316 331 2.8E-47 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 PhaeoP54_01980 dd83c08de2b1a3f0d124e95160d0e4b2 394 PRINTS PR00359 B-class P450 signature 86 97 2.8E-47 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 PhaeoP54_01980 dd83c08de2b1a3f0d124e95160d0e4b2 394 PRINTS PR00359 B-class P450 signature 192 214 2.8E-47 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 PhaeoP54_01980 dd83c08de2b1a3f0d124e95160d0e4b2 394 PRINTS PR00359 B-class P450 signature 337 346 2.8E-47 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 PhaeoP54_01980 dd83c08de2b1a3f0d124e95160d0e4b2 394 PRINTS PR00359 B-class P450 signature 288 315 2.8E-47 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 PhaeoP54_01980 dd83c08de2b1a3f0d124e95160d0e4b2 394 Gene3D G3DSA:1.10.630.10 2 394 9.8E-110 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 PhaeoP54_03409 979a059b5cbd1119b972f92679976599 242 SUPERFAMILY SSF53271 64 240 4.72E-32 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like PhaeoP54_03409 979a059b5cbd1119b972f92679976599 242 Pfam PF00156 Phosphoribosyl transferase domain 146 238 1.8E-8 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 PhaeoP54_03409 979a059b5cbd1119b972f92679976599 242 Gene3D G3DSA:3.40.50.2020 100 242 6.0E-18 T 14-10-2018 PhaeoP54_02011 528be0a1058d4f301a4af9d1944e9f6a 282 Hamap MF_00697 UPF0276 protein . 12 282 43.55 T 14-10-2018 IPR007801 Uncharacterised protein family UPF0276 PhaeoP54_02011 528be0a1058d4f301a4af9d1944e9f6a 282 Pfam PF05114 Protein of unknown function (DUF692) 12 277 4.3E-102 T 14-10-2018 IPR007801 Uncharacterised protein family UPF0276 PhaeoP54_02011 528be0a1058d4f301a4af9d1944e9f6a 282 Gene3D G3DSA:3.20.20.150 9 280 1.7E-85 T 14-10-2018 PhaeoP54_02011 528be0a1058d4f301a4af9d1944e9f6a 282 SUPERFAMILY SSF51658 14 272 3.79E-13 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily PhaeoP54_03465 136b4b08df07a63848706ddb5b1ec3f8 64 Pfam PF06568 Domain of unknown function (DUF1127) 29 61 8.7E-14 T 14-10-2018 IPR009506 Protein of unknown function DUF1127 PhaeoP54_01772 cc9b4afc3ecd0afeb39b3c74a53d8564 137 Pfam PF06199 Phage tail tube protein 3 134 2.0E-44 T 14-10-2018 IPR011855 Phage major tail protein TP901-1 PhaeoP54_01772 cc9b4afc3ecd0afeb39b3c74a53d8564 137 TIGRFAM TIGR02126 phgtail_TP901_1: phage major tail protein, TP901-1 family 3 130 4.0E-27 T 14-10-2018 IPR011855 Phage major tail protein TP901-1 PhaeoP54_01772 cc9b4afc3ecd0afeb39b3c74a53d8564 137 PRINTS PR01996 Phage major tail protein 1 family signature 1 13 5.7E-50 T 14-10-2018 IPR022344 Gene transfer agent, major tail protein PhaeoP54_01772 cc9b4afc3ecd0afeb39b3c74a53d8564 137 PRINTS PR01996 Phage major tail protein 1 family signature 21 50 5.7E-50 T 14-10-2018 IPR022344 Gene transfer agent, major tail protein PhaeoP54_01772 cc9b4afc3ecd0afeb39b3c74a53d8564 137 PRINTS PR01996 Phage major tail protein 1 family signature 110 134 5.7E-50 T 14-10-2018 IPR022344 Gene transfer agent, major tail protein PhaeoP54_01772 cc9b4afc3ecd0afeb39b3c74a53d8564 137 PRINTS PR01996 Phage major tail protein 1 family signature 83 106 5.7E-50 T 14-10-2018 IPR022344 Gene transfer agent, major tail protein PhaeoP54_03583 120701502d1b30abed1b017be3092bf3 244 SUPERFAMILY SSF46785 1 62 7.02E-11 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_03583 120701502d1b30abed1b017be3092bf3 244 Pfam PF13280 WYL domain 138 224 1.2E-17 T 14-10-2018 IPR026881 WYL domain PhaeoP54_03583 120701502d1b30abed1b017be3092bf3 244 Gene3D G3DSA:1.10.10.10 1 62 6.3E-13 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_03583 120701502d1b30abed1b017be3092bf3 244 Pfam PF08279 HTH domain 6 59 3.2E-15 T 14-10-2018 IPR013196 Helix-turn-helix, type 11 PhaeoP54_02771 7d4b6685f3ba30eec9eb5754b5f26760 259 Gene3D G3DSA:3.60.20.10 1 257 9.3E-90 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal PhaeoP54_02771 7d4b6685f3ba30eec9eb5754b5f26760 259 Pfam PF13230 Glutamine amidotransferases class-II 36 198 2.7E-12 T 14-10-2018 IPR026869 Putative glutamine amidotransferase type 2 PhaeoP54_02771 7d4b6685f3ba30eec9eb5754b5f26760 259 SUPERFAMILY SSF56235 2 249 4.89E-33 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal PhaeoP54_00462 038d012bb7a2b5204f05df6d1a198650 387 Gene3D G3DSA:1.20.58.710 140 239 3.1E-86 T 14-10-2018 PhaeoP54_00462 038d012bb7a2b5204f05df6d1a198650 387 Pfam PF00144 Beta-lactamase 93 369 7.3E-33 T 14-10-2018 IPR001466 Beta-lactamase-related PhaeoP54_00462 038d012bb7a2b5204f05df6d1a198650 387 Gene3D G3DSA:3.40.710.10 89 363 3.1E-86 T 14-10-2018 PhaeoP54_00462 038d012bb7a2b5204f05df6d1a198650 387 SUPERFAMILY SSF56601 9 385 1.51E-82 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like PhaeoP54_00678 5ac844b0db5648780cd4510963b199a1 417 SUPERFAMILY SSF46626 70 222 3.3E-38 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PhaeoP54_00678 5ac844b0db5648780cd4510963b199a1 417 SUPERFAMILY SSF46626 213 403 1.3E-29 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PhaeoP54_00678 5ac844b0db5648780cd4510963b199a1 417 Pfam PF03150 Di-haem cytochrome c peroxidase 88 234 9.4E-42 T 14-10-2018 IPR004852 Di-haem cytochrome c peroxidase GO:0016491|GO:0055114 PhaeoP54_00678 5ac844b0db5648780cd4510963b199a1 417 Gene3D G3DSA:1.10.760.10 84 222 8.2E-78 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PhaeoP54_00678 5ac844b0db5648780cd4510963b199a1 417 PIRSF PIRSF000294 45 411 1.3E-67 T 14-10-2018 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase GO:0016491|GO:0020037|GO:0055114 PhaeoP54_00678 5ac844b0db5648780cd4510963b199a1 417 Gene3D G3DSA:1.10.760.10 223 404 8.2E-78 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PhaeoP54_01358 ed129323cb0e70517d1ae3678f87f28a 470 Gene3D G3DSA:3.50.50.60 14 414 1.5E-22 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PhaeoP54_01358 ed129323cb0e70517d1ae3678f87f28a 470 SUPERFAMILY SSF51905 16 357 7.13E-20 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PhaeoP54_03801 8bd333ed6399db83a08636b385aef883 260 Gene3D G3DSA:3.75.10.10 6 260 3.2E-61 T 14-10-2018 PhaeoP54_03801 8bd333ed6399db83a08636b385aef883 260 SUPERFAMILY SSF55909 9 259 6.11E-48 T 14-10-2018 PhaeoP54_03801 8bd333ed6399db83a08636b385aef883 260 Pfam PF02274 Amidinotransferase 41 251 2.3E-10 T 14-10-2018 PhaeoP54_01633 4dbfb2f83b5bfbcd4a847bda30d19d82 198 Pfam PF13505 Outer membrane protein beta-barrel domain 40 196 5.6E-11 T 14-10-2018 IPR027385 Outer membrane protein beta-barrel PhaeoP54_01633 4dbfb2f83b5bfbcd4a847bda30d19d82 198 Gene3D G3DSA:2.40.160.20 54 198 6.6E-10 T 14-10-2018 PhaeoP54_01633 4dbfb2f83b5bfbcd4a847bda30d19d82 198 SUPERFAMILY SSF56925 57 198 2.86E-13 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel PhaeoP54_03889 60d97c146f7b73d0cc677ef9931e1847 639 Pfam PF01804 Penicillin amidase 336 609 1.0E-38 T 14-10-2018 IPR002692 Penicillin/GL-7-ACA/AHL/aculeacin-A acylase GO:0016787|GO:0017000 PhaeoP54_03889 60d97c146f7b73d0cc677ef9931e1847 639 Pfam PF01804 Penicillin amidase 88 262 1.7E-27 T 14-10-2018 IPR002692 Penicillin/GL-7-ACA/AHL/aculeacin-A acylase GO:0016787|GO:0017000 PhaeoP54_03889 60d97c146f7b73d0cc677ef9931e1847 639 Gene3D G3DSA:1.10.1400.10 365 509 4.8E-39 T 14-10-2018 PhaeoP54_03889 60d97c146f7b73d0cc677ef9931e1847 639 Gene3D G3DSA:1.10.439.10 21 98 1.8E-19 T 14-10-2018 IPR023343 Penicillin amidase type, domain 1 GO:0016811 PhaeoP54_03889 60d97c146f7b73d0cc677ef9931e1847 639 SUPERFAMILY SSF56235 45 625 1.62E-99 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal PhaeoP54_03889 60d97c146f7b73d0cc677ef9931e1847 639 Gene3D G3DSA:3.60.20.10 198 262 4.4E-19 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal PhaeoP54_03889 60d97c146f7b73d0cc677ef9931e1847 639 Gene3D G3DSA:3.60.20.10 336 601 4.8E-39 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal PhaeoP54_01970 96977cbe77f4d8069d2321794d17c057 403 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 7 211 6.1E-55 T 14-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain PhaeoP54_01970 96977cbe77f4d8069d2321794d17c057 403 SMART SM00833 259 374 1.7E-46 T 14-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal PhaeoP54_01970 96977cbe77f4d8069d2321794d17c057 403 Gene3D G3DSA:3.40.50.300 3 230 6.0E-70 T 14-10-2018 PhaeoP54_01970 96977cbe77f4d8069d2321794d17c057 403 SUPERFAMILY SSF52540 3 321 4.51E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_01970 96977cbe77f4d8069d2321794d17c057 403 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 260 374 1.4E-23 T 14-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal PhaeoP54_02225 5637594f3a765c3f01cf5561940031c7 204 Pfam PF04279 Intracellular septation protein A 10 194 4.6E-48 T 14-10-2018 IPR006008 Intracellular septation protein A GO:0016021 PhaeoP54_02225 5637594f3a765c3f01cf5561940031c7 204 Hamap MF_00189 Probable intracellular septation protein A [yciB]. 10 197 15.729 T 14-10-2018 IPR006008 Intracellular septation protein A GO:0016021 PhaeoP54_01441 789b5ed5650ce094802bfe115a39fb5c 289 TIGRFAM TIGR03707 PPK2_P_aer: polyphosphate kinase 2 43 271 2.1E-112 T 14-10-2018 IPR022486 Polyphosphate kinase 2, PA0141 GO:0006793|GO:0008976 KEGG: 00190+2.7.4.1 PhaeoP54_01441 789b5ed5650ce094802bfe115a39fb5c 289 PIRSF PIRSF028756 8 279 2.2E-113 T 14-10-2018 IPR016898 Polyphosphate kinase 2 KEGG: 00190+2.7.4.1 PhaeoP54_01441 789b5ed5650ce094802bfe115a39fb5c 289 Gene3D G3DSA:3.40.50.300 9 287 1.6E-97 T 14-10-2018 PhaeoP54_01441 789b5ed5650ce094802bfe115a39fb5c 289 SUPERFAMILY SSF52540 76 261 9.27E-25 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_01441 789b5ed5650ce094802bfe115a39fb5c 289 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 44 270 3.1E-98 T 14-10-2018 IPR022488 Polyphosphate kinase-2-related PhaeoP54_00885 ba7cfcc5663516d22e3204db5407a91d 206 SUPERFAMILY SSF53474 10 196 2.12E-8 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold PhaeoP54_00885 ba7cfcc5663516d22e3204db5407a91d 206 Pfam PF04301 Protein of unknown function (DUF452) 8 203 4.6E-25 T 14-10-2018 IPR007398 Protein of unknown function DUF452 PhaeoP54_00885 ba7cfcc5663516d22e3204db5407a91d 206 Gene3D G3DSA:3.40.50.1820 14 199 4.0E-5 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold PhaeoP54_00397 842cf46fc2ed6519efd2fba8343f6d78 369 Pfam PF05861 Bacterial phosphonate metabolism protein (PhnI) 1 354 1.7E-160 T 14-10-2018 IPR008773 Phosphonate metabolism protein PhnI GO:0019634 PhaeoP54_00397 842cf46fc2ed6519efd2fba8343f6d78 369 PIRSF PIRSF007313 1 366 4.0E-157 T 14-10-2018 IPR008773 Phosphonate metabolism protein PhnI GO:0019634 PhaeoP54_00742 7b0b7c90f6fb6e3aca242af79a374c14 170 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 24 154 1.6E-30 T 14-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ PhaeoP54_02742 71c2a90408a2f177dfd9ed9c57a68a7c 156 Pfam PF01814 Hemerythrin HHE cation binding domain 4 118 7.5E-11 T 14-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 PhaeoP54_02742 71c2a90408a2f177dfd9ed9c57a68a7c 156 Gene3D G3DSA:1.20.120.520 1 141 3.0E-10 T 14-10-2018 PhaeoP54_00582 948d7b0e7e5756dff63691e6932bc2f2 481 Gene3D G3DSA:3.30.450.380 44 222 1.1E-40 T 14-10-2018 PhaeoP54_00582 948d7b0e7e5756dff63691e6932bc2f2 481 Gene3D G3DSA:3.40.50.300 224 456 7.7E-73 T 14-10-2018 PhaeoP54_00582 948d7b0e7e5756dff63691e6932bc2f2 481 Pfam PF00437 Type II/IV secretion system protein 127 403 1.4E-83 T 14-10-2018 IPR001482 Type II/IV secretion system protein PhaeoP54_00582 948d7b0e7e5756dff63691e6932bc2f2 481 SUPERFAMILY SSF52540 110 410 3.12E-62 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_00243 f345341f8128b57514d31d83db99a674 293 Gene3D G3DSA:1.10.3720.10 50 291 5.5E-49 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_00243 f345341f8128b57514d31d83db99a674 293 SUPERFAMILY SSF161098 54 281 9.03E-44 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_00243 f345341f8128b57514d31d83db99a674 293 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 79 291 1.6E-8 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PhaeoP54_03460 6ffdfb7086411acc9a740a197686e64d 381 PIRSF PIRSF033909 1 359 2.9E-67 T 14-10-2018 IPR014586 Uncharacterised conserved protein UCP033909 PhaeoP54_03460 6ffdfb7086411acc9a740a197686e64d 381 Gene3D G3DSA:3.40.50.1820 113 327 8.2E-10 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold PhaeoP54_03460 6ffdfb7086411acc9a740a197686e64d 381 SUPERFAMILY SSF53474 120 263 7.6E-14 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold PhaeoP54_03460 6ffdfb7086411acc9a740a197686e64d 381 Pfam PF05990 Alpha/beta hydrolase of unknown function (DUF900) 123 328 5.7E-49 T 14-10-2018 IPR010297 Protein of unknown function DUF900, hydrolase-like PhaeoP54_02581 e6a251e4246ddede0ea7ae82520509e6 141 Gene3D G3DSA:3.10.129.10 4 141 4.0E-50 T 14-10-2018 PhaeoP54_02581 e6a251e4246ddede0ea7ae82520509e6 141 Pfam PF03061 Thioesterase superfamily 50 124 3.8E-12 T 14-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 PhaeoP54_02581 e6a251e4246ddede0ea7ae82520509e6 141 SUPERFAMILY SSF54637 3 129 2.05E-30 T 14-10-2018 IPR029069 HotDog domain superfamily PhaeoP54_02581 e6a251e4246ddede0ea7ae82520509e6 141 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 22 129 4.1E-22 T 14-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 PhaeoP54_02581 e6a251e4246ddede0ea7ae82520509e6 141 TIGRFAM TIGR02286 PaaD: phenylacetic acid degradation protein PaaD 22 133 9.0E-42 T 14-10-2018 IPR011973 Phenylacetic acid degradation protein PaaD GO:0016790 PhaeoP54_02824 61ad690b474b45f5c0d02147cf6e60d8 162 Pfam PF08534 Redoxin 4 153 2.7E-29 T 14-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 PhaeoP54_02824 61ad690b474b45f5c0d02147cf6e60d8 162 Gene3D G3DSA:3.40.30.10 1 161 2.8E-49 T 14-10-2018 PhaeoP54_02824 61ad690b474b45f5c0d02147cf6e60d8 162 SUPERFAMILY SSF52833 1 159 7.04E-32 T 14-10-2018 IPR036249 Thioredoxin-like superfamily PhaeoP54_02977 f9956d53eccb10575f9bad56ce995e81 267 Pfam PF09335 SNARE associated Golgi protein 97 215 2.1E-18 T 14-10-2018 IPR032816 SNARE associated Golgi protein PhaeoP54_00511 0805d22dab9f75794b4fcb7b43ee0ab2 369 SUPERFAMILY SSF53448 63 223 2.11E-6 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PhaeoP54_00511 0805d22dab9f75794b4fcb7b43ee0ab2 369 Pfam PF13704 Glycosyl transferase family 2 71 155 7.4E-16 T 14-10-2018 PhaeoP54_03295 6f60b9f9eece6866ee198aa7b4d10fef 205 Gene3D G3DSA:3.30.420.10 5 205 3.6E-74 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 PhaeoP54_03295 6f60b9f9eece6866ee198aa7b4d10fef 205 SUPERFAMILY SSF53098 12 202 2.58E-67 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily PhaeoP54_03295 6f60b9f9eece6866ee198aa7b4d10fef 205 Pfam PF01351 Ribonuclease HII 21 197 4.3E-42 T 14-10-2018 IPR024567 Ribonuclease HII/HIII domain PhaeoP54_03295 6f60b9f9eece6866ee198aa7b4d10fef 205 Hamap MF_00052_B Ribonuclease HII [rnhB]. 19 198 37.125 T 14-10-2018 IPR022898 Ribonuclease HII GO:0004523 PhaeoP54_00673 f325a4604538cb0f74bd1855314afed0 144 TIGRFAM TIGR00220 mscL: large conductance mechanosensitive channel protein 1 143 2.9E-34 T 14-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 PhaeoP54_00673 f325a4604538cb0f74bd1855314afed0 144 SUPERFAMILY SSF81330 11 123 1.44E-32 T 14-10-2018 IPR036019 Gated mechanosensitive channel PhaeoP54_00673 f325a4604538cb0f74bd1855314afed0 144 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 91 99 1.5E-10 T 14-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 PhaeoP54_00673 f325a4604538cb0f74bd1855314afed0 144 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 4 18 1.5E-10 T 14-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 PhaeoP54_00673 f325a4604538cb0f74bd1855314afed0 144 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 100 109 1.5E-10 T 14-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 PhaeoP54_00673 f325a4604538cb0f74bd1855314afed0 144 Pfam PF01741 Large-conductance mechanosensitive channel, MscL 1 143 2.0E-41 T 14-10-2018 IPR037673 Large-conductance mechanosensitive channel/anditomin synthesis protein L PhaeoP54_00673 f325a4604538cb0f74bd1855314afed0 144 Gene3D G3DSA:1.10.1200.120 1 144 1.1E-38 T 14-10-2018 IPR036019 Gated mechanosensitive channel PhaeoP54_00673 f325a4604538cb0f74bd1855314afed0 144 Hamap MF_00115 Large-conductance mechanosensitive channel [mscL]. 1 144 22.894 T 14-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 PhaeoP54_00673 f325a4604538cb0f74bd1855314afed0 144 ProSitePatterns PS01327 Large-conductance mechanosensitive channels mscL family signature. 11 24 - T 14-10-2018 IPR019823 Large-conductance mechanosensitive channel, conserved site PhaeoP54_02195 e2b5df59afa4f321411b9a3b296f6a2e 293 SUPERFAMILY SSF56112 13 285 9.04E-49 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily PhaeoP54_02195 e2b5df59afa4f321411b9a3b296f6a2e 293 Gene3D G3DSA:3.30.200.20 3 91 6.7E-9 T 14-10-2018 PhaeoP54_02195 e2b5df59afa4f321411b9a3b296f6a2e 293 Pfam PF01633 Choline/ethanolamine kinase 42 223 1.0E-23 T 14-10-2018 PhaeoP54_02195 e2b5df59afa4f321411b9a3b296f6a2e 293 Gene3D G3DSA:3.90.1200.10 92 293 1.3E-46 T 14-10-2018 PhaeoP54_01319 706b20b0e16937bc507b4e3119931133 105 Pfam PF07345 Domain of unknown function (DUF1476) 1 99 1.1E-38 T 14-10-2018 IPR009945 Protein of unknown function DUF1476 PhaeoP54_01319 706b20b0e16937bc507b4e3119931133 105 PIRSF PIRSF031780 1 104 1.4E-37 T 14-10-2018 IPR009945 Protein of unknown function DUF1476 PhaeoP54_01319 706b20b0e16937bc507b4e3119931133 105 Gene3D G3DSA:1.10.790.20 1 104 1.3E-39 T 14-10-2018 PhaeoP54_03355 1a3a7fbfb303546311351e4421c4c0e8 211 SUPERFAMILY SSF53335 10 161 4.87E-23 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PhaeoP54_03355 1a3a7fbfb303546311351e4421c4c0e8 211 Gene3D G3DSA:3.40.50.150 15 183 5.4E-20 T 14-10-2018 PhaeoP54_03355 1a3a7fbfb303546311351e4421c4c0e8 211 Pfam PF13649 Methyltransferase domain 60 149 1.2E-8 T 14-10-2018 PhaeoP54_01202 8e0f8e059d927b3a1826dc4fc3688cd6 126 Pfam PF03334 Na+/H+ antiporter subunit 12 91 2.0E-22 T 14-10-2018 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:1902600 PhaeoP54_01202 8e0f8e059d927b3a1826dc4fc3688cd6 126 TIGRFAM TIGR01300 CPA3_mnhG_phaG: monovalent cation/proton antiporter, MnhG/PhaG subunit 12 95 2.2E-20 T 14-10-2018 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:1902600 PhaeoP54_03027 afb46a312a269d0612fd63d81d678a09 155 Pfam PF10517 Electron transfer DM13 60 154 6.2E-17 T 14-10-2018 IPR019545 DM13 domain PhaeoP54_03759 9738b8980ba645205d9b48fdd48a51f1 330 Pfam PF01244 Membrane dipeptidase (Peptidase family M19) 15 321 5.1E-72 T 14-10-2018 IPR008257 Peptidase M19 GO:0006508|GO:0016805 MetaCyc: PWY-7533|Reactome: R-HSA-2142691|Reactome: R-HSA-5423646 PhaeoP54_03759 9738b8980ba645205d9b48fdd48a51f1 330 SUPERFAMILY SSF51556 6 325 6.69E-87 T 14-10-2018 IPR032466 Metal-dependent hydrolase PhaeoP54_03759 9738b8980ba645205d9b48fdd48a51f1 330 Gene3D G3DSA:3.20.20.140 1 326 1.7E-89 T 14-10-2018 PhaeoP54_01336 a6932dfb979d4f1ae5edf4c0b48be594 432 Pfam PF02417 Chromate transporter 21 184 2.9E-36 T 14-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 PhaeoP54_01336 a6932dfb979d4f1ae5edf4c0b48be594 432 Pfam PF02417 Chromate transporter 235 403 6.2E-28 T 14-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 PhaeoP54_01336 a6932dfb979d4f1ae5edf4c0b48be594 432 PIRSF PIRSF004810 5 414 3.0E-113 T 14-10-2018 IPR014047 Chromate transporter, long chain PhaeoP54_01336 a6932dfb979d4f1ae5edf4c0b48be594 432 TIGRFAM TIGR00937 2A51: chromate efflux transporter 28 405 5.8E-60 T 14-10-2018 IPR014047 Chromate transporter, long chain PhaeoP54_00443 e03bbf82aadde60cbe22f09d466dc3d9 440 Gene3D G3DSA:3.40.50.12160 5 141 2.9E-35 T 14-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily PhaeoP54_00443 e03bbf82aadde60cbe22f09d466dc3d9 440 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 153 173 - T 14-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 PhaeoP54_00443 e03bbf82aadde60cbe22f09d466dc3d9 440 Pfam PF01938 TRAM domain 378 438 2.4E-5 T 14-10-2018 IPR002792 TRAM domain PhaeoP54_00443 e03bbf82aadde60cbe22f09d466dc3d9 440 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 5 439 71.887 T 14-10-2018 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 PhaeoP54_00443 e03bbf82aadde60cbe22f09d466dc3d9 440 Pfam PF04055 Radical SAM superfamily 154 326 7.9E-29 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 PhaeoP54_00443 e03bbf82aadde60cbe22f09d466dc3d9 440 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 6 436 3.0E-146 T 14-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 PhaeoP54_00443 e03bbf82aadde60cbe22f09d466dc3d9 440 Pfam PF00919 Uncharacterized protein family UPF0004 6 105 3.4E-32 T 14-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 PhaeoP54_00443 e03bbf82aadde60cbe22f09d466dc3d9 440 Gene3D G3DSA:3.80.30.20 147 381 5.0E-85 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe PhaeoP54_00443 e03bbf82aadde60cbe22f09d466dc3d9 440 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 6 438 1.5E-149 T 14-10-2018 PhaeoP54_00443 e03bbf82aadde60cbe22f09d466dc3d9 440 SUPERFAMILY SSF102114 124 372 1.7E-59 T 14-10-2018 PhaeoP54_00443 e03bbf82aadde60cbe22f09d466dc3d9 440 SMART SM00729 149 367 5.3E-59 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 PhaeoP54_01170 9ef7c687d92be0bb60148ffe1a72efe7 480 Pfam PF01425 Amidase 28 452 2.8E-81 T 14-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 PhaeoP54_01170 9ef7c687d92be0bb60148ffe1a72efe7 480 Gene3D G3DSA:3.90.1300.10 1 471 1.6E-106 T 14-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 PhaeoP54_01170 9ef7c687d92be0bb60148ffe1a72efe7 480 SUPERFAMILY SSF75304 3 464 5.1E-110 T 14-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 PhaeoP54_03380 3a0e830935f290487e304a8db2616518 293 Gene3D G3DSA:1.10.3720.10 3 291 4.9E-59 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_03380 3a0e830935f290487e304a8db2616518 293 SUPERFAMILY SSF161098 2 288 9.03E-59 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_03380 3a0e830935f290487e304a8db2616518 293 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 93 279 6.2E-18 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PhaeoP54_01398 d16ad843f2d0583d033ffe52cb5060b5 556 PIRSF PIRSF002741 25 555 5.8E-54 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 PhaeoP54_01398 d16ad843f2d0583d033ffe52cb5060b5 556 Gene3D G3DSA:3.40.190.10 52 306 4.5E-39 T 14-10-2018 PhaeoP54_01398 d16ad843f2d0583d033ffe52cb5060b5 556 SUPERFAMILY SSF53850 73 552 1.99E-91 T 14-10-2018 PhaeoP54_01398 d16ad843f2d0583d033ffe52cb5060b5 556 Gene3D G3DSA:3.10.105.10 326 522 2.8E-33 T 14-10-2018 PhaeoP54_01398 d16ad843f2d0583d033ffe52cb5060b5 556 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 108 461 4.2E-57 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain PhaeoP54_03510 f388cf55ddd5b36c00793509b0f83758 259 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 27 48 2.3E-19 T 14-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 PhaeoP54_03510 f388cf55ddd5b36c00793509b0f83758 259 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 205 224 2.3E-19 T 14-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 PhaeoP54_03510 f388cf55ddd5b36c00793509b0f83758 259 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 183 205 2.3E-19 T 14-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 PhaeoP54_03510 f388cf55ddd5b36c00793509b0f83758 259 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 85 104 2.3E-19 T 14-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 PhaeoP54_03510 f388cf55ddd5b36c00793509b0f83758 259 Pfam PF01311 Bacterial export proteins, family 1 22 247 6.8E-45 T 14-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 PhaeoP54_02703 d78b4503219413b049dcb6fa23d028f3 215 Gene3D G3DSA:3.20.20.70 2 214 3.5E-70 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PhaeoP54_02703 d78b4503219413b049dcb6fa23d028f3 215 SUPERFAMILY SSF51569 12 213 7.14E-65 T 14-10-2018 PhaeoP54_02703 d78b4503219413b049dcb6fa23d028f3 215 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 13 212 3.4E-72 T 14-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 PhaeoP54_02703 d78b4503219413b049dcb6fa23d028f3 215 Pfam PF01081 KDPG and KHG aldolase 14 204 2.3E-66 T 14-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 PhaeoP54_02703 d78b4503219413b049dcb6fa23d028f3 215 ProSitePatterns PS00159 KDPG and KHG aldolases active site. 44 53 - T 14-10-2018 IPR031337 KDPG/KHG aldolase, active site 1 KEGG: 00030+4.1.2.14|KEGG: 00330+4.1.3.16|KEGG: 00630+4.1.3.16|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 PhaeoP54_02703 d78b4503219413b049dcb6fa23d028f3 215 ProSitePatterns PS00160 KDPG and KHG aldolases Schiff-base forming residue. 131 144 - T 14-10-2018 IPR031338 KDPG/KHG aldolase, active site 2 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 PhaeoP54_01628 178527d49556db732bffea067db41ee9 408 SUPERFAMILY SSF103473 14 404 3.4E-33 T 14-10-2018 IPR036259 MFS transporter superfamily PhaeoP54_01628 178527d49556db732bffea067db41ee9 408 Gene3D G3DSA:1.20.1250.20 11 401 6.2E-29 T 14-10-2018 PhaeoP54_01628 178527d49556db732bffea067db41ee9 408 Pfam PF07690 Major Facilitator Superfamily 224 404 7.0E-12 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PhaeoP54_01818 02303da041da8c6a288ca86593724abd 243 SUPERFAMILY SSF52833 27 242 1.64E-66 T 14-10-2018 IPR036249 Thioredoxin-like superfamily PhaeoP54_01818 02303da041da8c6a288ca86593724abd 243 Pfam PF06764 Protein of unknown function (DUF1223) 32 221 4.2E-65 T 14-10-2018 IPR010634 Protein of unknown function DUF1223 PhaeoP54_01282 b42904bac89962bd0bf6f9621441c66b 404 SUPERFAMILY SSF103473 7 398 2.62E-59 T 14-10-2018 IPR036259 MFS transporter superfamily PhaeoP54_01282 b42904bac89962bd0bf6f9621441c66b 404 PRINTS PR01035 Tetracycline resistance protein signature 78 102 1.4E-55 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 PhaeoP54_01282 b42904bac89962bd0bf6f9621441c66b 404 PRINTS PR01035 Tetracycline resistance protein signature 304 324 1.4E-55 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 PhaeoP54_01282 b42904bac89962bd0bf6f9621441c66b 404 PRINTS PR01035 Tetracycline resistance protein signature 16 32 1.4E-55 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 PhaeoP54_01282 b42904bac89962bd0bf6f9621441c66b 404 PRINTS PR01035 Tetracycline resistance protein signature 251 271 1.4E-55 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 PhaeoP54_01282 b42904bac89962bd0bf6f9621441c66b 404 PRINTS PR01035 Tetracycline resistance protein signature 135 157 1.4E-55 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 PhaeoP54_01282 b42904bac89962bd0bf6f9621441c66b 404 PRINTS PR01035 Tetracycline resistance protein signature 105 126 1.4E-55 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 PhaeoP54_01282 b42904bac89962bd0bf6f9621441c66b 404 PRINTS PR01035 Tetracycline resistance protein signature 339 362 1.4E-55 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 PhaeoP54_01282 b42904bac89962bd0bf6f9621441c66b 404 PRINTS PR01035 Tetracycline resistance protein signature 163 183 1.4E-55 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 PhaeoP54_01282 b42904bac89962bd0bf6f9621441c66b 404 PRINTS PR01035 Tetracycline resistance protein signature 222 239 1.4E-55 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 PhaeoP54_01282 b42904bac89962bd0bf6f9621441c66b 404 Gene3D G3DSA:1.20.1250.20 6 399 1.5E-64 T 14-10-2018 PhaeoP54_01282 b42904bac89962bd0bf6f9621441c66b 404 Pfam PF07690 Major Facilitator Superfamily 11 355 1.4E-47 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PhaeoP54_01296 482e6c99dd778639d95cd9dae9d59f21 488 SUPERFAMILY SSF51735 1 284 2.13E-95 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PhaeoP54_01296 482e6c99dd778639d95cd9dae9d59f21 488 Gene3D G3DSA:3.40.50.720 1 283 3.4E-100 T 14-10-2018 PhaeoP54_01296 482e6c99dd778639d95cd9dae9d59f21 488 Gene3D G3DSA:1.10.1040.10 284 487 1.3E-49 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 PhaeoP54_01296 482e6c99dd778639d95cd9dae9d59f21 488 PRINTS PR00084 Mannitol dehydrogenase signature 221 234 4.0E-15 T 14-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 PhaeoP54_01296 482e6c99dd778639d95cd9dae9d59f21 488 PRINTS PR00084 Mannitol dehydrogenase signature 182 195 4.0E-15 T 14-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 PhaeoP54_01296 482e6c99dd778639d95cd9dae9d59f21 488 PRINTS PR00084 Mannitol dehydrogenase signature 250 265 4.0E-15 T 14-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 PhaeoP54_01296 482e6c99dd778639d95cd9dae9d59f21 488 PRINTS PR00084 Mannitol dehydrogenase signature 29 39 4.0E-15 T 14-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 PhaeoP54_01296 482e6c99dd778639d95cd9dae9d59f21 488 SUPERFAMILY SSF48179 285 487 7.14E-50 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 PhaeoP54_01296 482e6c99dd778639d95cd9dae9d59f21 488 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 28 191 5.2E-40 T 14-10-2018 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 PhaeoP54_01296 482e6c99dd778639d95cd9dae9d59f21 488 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 222 457 1.2E-65 T 14-10-2018 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 PhaeoP54_01035 8cd9762ceb6e1e9c8db2a27444c685c5 390 SUPERFAMILY SSF51294 201 351 1.7E-29 T 14-10-2018 IPR036844 Hint domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 PhaeoP54_01035 8cd9762ceb6e1e9c8db2a27444c685c5 390 Pfam PF13403 Hint domain 202 339 9.0E-37 T 14-10-2018 IPR028992 Hedgehog/Intein (Hint) domain PhaeoP54_01035 8cd9762ceb6e1e9c8db2a27444c685c5 390 Gene3D G3DSA:2.170.16.10 195 295 1.5E-7 T 14-10-2018 PhaeoP54_01311 cf639f38dc7badf2b98082deaa16b17c 137 Pfam PF02657 Fe-S metabolism associated domain 10 130 8.1E-43 T 14-10-2018 IPR003808 Fe-S metabolism associated domain, SufE-like PhaeoP54_01311 cf639f38dc7badf2b98082deaa16b17c 137 SUPERFAMILY SSF82649 5 132 1.05E-45 T 14-10-2018 PhaeoP54_01311 cf639f38dc7badf2b98082deaa16b17c 137 Gene3D G3DSA:3.90.1010.10 1 135 5.4E-46 T 14-10-2018 PhaeoP54_01511 d0b59387e25859d0f779f6b8c1e88d16 197 SUPERFAMILY SSF52540 9 143 6.07E-12 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_01511 d0b59387e25859d0f779f6b8c1e88d16 197 Gene3D G3DSA:3.40.50.300 4 148 1.4E-5 T 14-10-2018 PhaeoP54_01027 5436eca496a438c6cea6f90ff8373486 262 Gene3D G3DSA:3.30.420.40 1 87 9.7E-26 T 14-10-2018 PhaeoP54_01027 5436eca496a438c6cea6f90ff8373486 262 TIGRFAM TIGR00671 baf: pantothenate kinase, type III 2 249 2.8E-60 T 14-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 PhaeoP54_01027 5436eca496a438c6cea6f90ff8373486 262 Hamap MF_01274 Type III pantothenate kinase [coaX]. 1 254 33.489 T 14-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 PhaeoP54_01027 5436eca496a438c6cea6f90ff8373486 262 SUPERFAMILY SSF53067 1 122 4.14E-29 T 14-10-2018 PhaeoP54_01027 5436eca496a438c6cea6f90ff8373486 262 Pfam PF03309 Type III pantothenate kinase 2 205 2.7E-64 T 14-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 PhaeoP54_01027 5436eca496a438c6cea6f90ff8373486 262 Gene3D G3DSA:3.30.420.40 90 262 8.5E-55 T 14-10-2018 PhaeoP54_01027 5436eca496a438c6cea6f90ff8373486 262 SUPERFAMILY SSF53067 123 253 1.51E-40 T 14-10-2018 PhaeoP54_02020 af439264b13a0f7cf78ae2545baa5282 272 Gene3D G3DSA:3.40.50.1820 8 263 4.0E-56 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold PhaeoP54_02020 af439264b13a0f7cf78ae2545baa5282 272 PRINTS PR00111 Alpha/beta hydrolase fold signature 49 64 7.8E-9 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 PhaeoP54_02020 af439264b13a0f7cf78ae2545baa5282 272 PRINTS PR00111 Alpha/beta hydrolase fold signature 107 120 7.8E-9 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 PhaeoP54_02020 af439264b13a0f7cf78ae2545baa5282 272 PRINTS PR00111 Alpha/beta hydrolase fold signature 93 106 7.8E-9 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 PhaeoP54_02020 af439264b13a0f7cf78ae2545baa5282 272 SUPERFAMILY SSF53474 12 261 2.03E-55 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold PhaeoP54_02020 af439264b13a0f7cf78ae2545baa5282 272 Pfam PF12697 Alpha/beta hydrolase family 26 254 1.2E-20 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 PhaeoP54_01914 6d972461da71007d1f175ea9ae8656e0 275 SUPERFAMILY SSF53448 1 255 3.55E-63 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PhaeoP54_01914 6d972461da71007d1f175ea9ae8656e0 275 Pfam PF00483 Nucleotidyl transferase 2 206 2.9E-15 T 14-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 PhaeoP54_01914 6d972461da71007d1f175ea9ae8656e0 275 Gene3D G3DSA:3.90.550.10 1 255 7.8E-67 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PhaeoP54_01914 6d972461da71007d1f175ea9ae8656e0 275 TIGRFAM TIGR02623 G1P_cyt_trans: glucose-1-phosphate cytidylyltransferase 1 254 1.6E-131 T 14-10-2018 IPR013446 Glucose-1-phosphate cytidylyltransferase GO:0047343 KEGG: 00500+2.7.7.33|KEGG: 00520+2.7.7.33|MetaCyc: PWY-5833|MetaCyc: PWY-5940 PhaeoP54_01803 ecaff70a59c0691683f9c61eac275a22 376 Gene3D G3DSA:2.40.160.10 38 376 3.2E-13 T 14-10-2018 IPR023614 Porin domain superfamily PhaeoP54_01803 ecaff70a59c0691683f9c61eac275a22 376 Pfam PF13609 Gram-negative porin 12 356 6.6E-18 T 14-10-2018 PhaeoP54_01803 ecaff70a59c0691683f9c61eac275a22 376 SUPERFAMILY SSF56935 43 376 3.36E-17 T 14-10-2018 PhaeoP54_01795 70720d82c03d06b4a6261056ddd1595d 117 SUPERFAMILY SSF54995 1 104 1.44E-31 T 14-10-2018 IPR035980 Ribosomal protein S6 superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PhaeoP54_01795 70720d82c03d06b4a6261056ddd1595d 117 Pfam PF01250 Ribosomal protein S6 4 92 1.1E-26 T 14-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PhaeoP54_01795 70720d82c03d06b4a6261056ddd1595d 117 TIGRFAM TIGR00166 S6: ribosomal protein bS6 2 94 4.1E-24 T 14-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PhaeoP54_01795 70720d82c03d06b4a6261056ddd1595d 117 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 95 19.883 T 14-10-2018 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 PhaeoP54_01795 70720d82c03d06b4a6261056ddd1595d 117 Gene3D G3DSA:3.30.70.60 1 117 1.8E-27 T 14-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 PhaeoP54_03415 a2240f6c466c7114079adea267617e1c 163 Gene3D G3DSA:3.40.33.10 32 163 3.1E-29 T 14-10-2018 IPR035940 CAP superfamily PhaeoP54_03415 a2240f6c466c7114079adea267617e1c 163 SUPERFAMILY SSF55797 38 158 1.23E-13 T 14-10-2018 IPR035940 CAP superfamily PhaeoP54_03415 a2240f6c466c7114079adea267617e1c 163 Pfam PF00188 Cysteine-rich secretory protein family 45 159 2.1E-13 T 14-10-2018 IPR014044 CAP domain PhaeoP54_03884 988e4cb4f39cea09f0d116992330eaf7 152 Pfam PF04214 Protein of unknown function, DUF 64 122 1.4E-30 T 14-10-2018 IPR007332 Protein of unknown function DUF411 PhaeoP54_02591 5c8cef4fcadac197754356a9b89c4efa 343 Pfam PF02608 ABC transporter substrate-binding protein PnrA-like 72 282 7.4E-33 T 14-10-2018 IPR003760 ABC transporter substrate-binding protein PnrA-like GO:0005886 PhaeoP54_02591 5c8cef4fcadac197754356a9b89c4efa 343 Gene3D G3DSA:3.40.50.2300 43 298 4.5E-64 T 14-10-2018 PhaeoP54_02591 5c8cef4fcadac197754356a9b89c4efa 343 Gene3D G3DSA:3.40.50.2300 145 333 4.5E-64 T 14-10-2018 PhaeoP54_04027 06e29ccd3527bf2cbadda0f6fcd4a109 138 SUPERFAMILY SSF88723 1 137 8.5E-13 T 14-10-2018 IPR029060 PIN-like domain superfamily PhaeoP54_04027 06e29ccd3527bf2cbadda0f6fcd4a109 138 Pfam PF01850 PIN domain 1 136 2.1E-11 T 14-10-2018 IPR002716 PIN domain PhaeoP54_04027 06e29ccd3527bf2cbadda0f6fcd4a109 138 Gene3D G3DSA:3.40.50.1010 1 138 4.9E-34 T 14-10-2018 PhaeoP54_03288 818e7a51553777c2a0f767b852c1de00 334 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 19 326 7.8E-90 T 14-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 PhaeoP54_03288 818e7a51553777c2a0f767b852c1de00 334 SUPERFAMILY SSF52540 46 150 4.25E-7 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_03288 818e7a51553777c2a0f767b852c1de00 334 Hamap MF_00409 Tetraacyldisaccharide 4'-kinase [lpxK]. 2 327 34.208 T 14-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 PhaeoP54_03288 818e7a51553777c2a0f767b852c1de00 334 TIGRFAM TIGR00682 lpxK: tetraacyldisaccharide 4'-kinase 20 329 1.5E-63 T 14-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 PhaeoP54_03708 5f79b33d5c6d740bbe5d36a0af91103b 300 Gene3D G3DSA:3.60.21.10 8 290 2.4E-60 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like PhaeoP54_03708 5f79b33d5c6d740bbe5d36a0af91103b 300 SUPERFAMILY SSF56300 25 283 1.19E-40 T 14-10-2018 PhaeoP54_03708 5f79b33d5c6d740bbe5d36a0af91103b 300 Pfam PF00149 Calcineurin-like phosphoesterase 25 219 4.7E-11 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 PhaeoP54_03708 5f79b33d5c6d740bbe5d36a0af91103b 300 Hamap MF_00905 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA [cpdA]. 25 277 30.184 T 14-10-2018 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA GO:0004115 KEGG: 00230+3.1.4.53 PhaeoP54_00512 ee6436dbcf491737569fc591385f3de4 316 Pfam PF02685 Glucokinase 8 309 2.2E-44 T 14-10-2018 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0005536|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 PhaeoP54_00512 ee6436dbcf491737569fc591385f3de4 316 Gene3D G3DSA:3.30.420.40 7 305 1.9E-57 T 14-10-2018 PhaeoP54_00512 ee6436dbcf491737569fc591385f3de4 316 SUPERFAMILY SSF53067 5 313 3.16E-31 T 14-10-2018 PhaeoP54_00512 ee6436dbcf491737569fc591385f3de4 316 Gene3D G3DSA:3.40.367.20 105 294 1.9E-57 T 14-10-2018 PhaeoP54_01041 e67acaa19cd5f3512b895914ddfcf9e3 102 Gene3D G3DSA:3.30.70.100 1 94 9.8E-8 T 14-10-2018 PhaeoP54_01041 e67acaa19cd5f3512b895914ddfcf9e3 102 SUPERFAMILY SSF54909 3 82 3.55E-13 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel PhaeoP54_03848 0e3e6f9d252b48007ce6d07cda69f121 777 Pfam PF03432 Relaxase/Mobilisation nuclease domain 61 212 1.2E-12 T 14-10-2018 IPR005094 Endonuclease relaxase, MobA/VirD2 PhaeoP54_03157 26556cc249a33de28bc79b2a784356fc 180 SUPERFAMILY SSF54593 1 141 1.75E-37 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PhaeoP54_03157 26556cc249a33de28bc79b2a784356fc 180 Gene3D G3DSA:3.10.180.10 1 163 1.9E-36 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PhaeoP54_03157 26556cc249a33de28bc79b2a784356fc 180 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 6 134 4.1E-18 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain PhaeoP54_03907 395e47a6d08ec00d8aa0e7787de3c992 137 Gene3D G3DSA:3.30.530.20 2 137 4.5E-26 T 14-10-2018 IPR023393 START-like domain superfamily PhaeoP54_03907 395e47a6d08ec00d8aa0e7787de3c992 137 SUPERFAMILY SSF55961 2 134 2.45E-27 T 14-10-2018 PhaeoP54_03907 395e47a6d08ec00d8aa0e7787de3c992 137 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 14 131 1.0E-15 T 14-10-2018 IPR013538 Activator of Hsp90 ATPase homologue 1-like PhaeoP54_00790 b2c5552f972526e9aaf5ab68692951f3 125 SUPERFAMILY SSF54593 12 121 9.08E-19 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PhaeoP54_00790 b2c5552f972526e9aaf5ab68692951f3 125 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 14 115 3.2E-6 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain PhaeoP54_00790 b2c5552f972526e9aaf5ab68692951f3 125 Gene3D G3DSA:3.10.180.10 5 120 2.9E-18 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PhaeoP54_02927 ff564e884fe3e8b21d00e47e5a20cac2 257 Pfam PF06242 Protein of unknown function (DUF1013) 34 171 1.0E-62 T 14-10-2018 IPR010421 Protein of unknown function DUF1013 PhaeoP54_00438 a3f239c9fd17c6393dfa9e7e670abc03 169 TIGRFAM TIGR01749 fabA: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA 6 168 1.6E-78 T 14-10-2018 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 PhaeoP54_00438 a3f239c9fd17c6393dfa9e7e670abc03 169 Pfam PF07977 FabA-like domain 29 160 1.6E-44 T 14-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 PhaeoP54_00438 a3f239c9fd17c6393dfa9e7e670abc03 169 Gene3D G3DSA:3.10.129.10 4 169 3.1E-57 T 14-10-2018 PhaeoP54_00438 a3f239c9fd17c6393dfa9e7e670abc03 169 SUPERFAMILY SSF54637 5 167 2.09E-52 T 14-10-2018 IPR029069 HotDog domain superfamily PhaeoP54_01089 99be9ded5db9d00a07022eba188c7897 104 Pfam PF03795 YCII-related domain 20 93 9.1E-5 T 14-10-2018 IPR005545 YCII-related PhaeoP54_01089 99be9ded5db9d00a07022eba188c7897 104 SUPERFAMILY SSF54909 6 94 5.9E-10 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel PhaeoP54_01089 99be9ded5db9d00a07022eba188c7897 104 Gene3D G3DSA:3.30.70.1060 7 99 2.9E-11 T 14-10-2018 PhaeoP54_03572 5aa7b389e79617e7922776fab769bddc 507 Pfam PF00221 Aromatic amino acid lyase 10 469 1.2E-177 T 14-10-2018 IPR001106 Aromatic amino acid lyase Reactome: R-HSA-70921 PhaeoP54_03572 5aa7b389e79617e7922776fab769bddc 507 Gene3D G3DSA:1.10.275.10 2 195 1.5E-64 T 14-10-2018 IPR024083 Fumarase/histidase, N-terminal PhaeoP54_03572 5aa7b389e79617e7922776fab769bddc 507 SUPERFAMILY SSF48557 6 497 2.51E-186 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 PhaeoP54_03572 5aa7b389e79617e7922776fab769bddc 507 ProSitePatterns PS00488 Phenylalanine and histidine ammonia-lyases signature. 137 153 - T 14-10-2018 IPR022313 Phenylalanine/histidine ammonia-lyases, active site GO:0016841 Reactome: R-HSA-70921 PhaeoP54_03572 5aa7b389e79617e7922776fab769bddc 507 TIGRFAM TIGR01225 hutH: histidine ammonia-lyase 4 505 1.2E-200 T 14-10-2018 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 PhaeoP54_03572 5aa7b389e79617e7922776fab769bddc 507 Hamap MF_00229 Histidine ammonia-lyase [hutH]. 1 503 42.642 T 14-10-2018 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 PhaeoP54_03572 5aa7b389e79617e7922776fab769bddc 507 Gene3D G3DSA:1.20.200.10 196 506 7.0E-110 T 14-10-2018 PhaeoP54_01700 9f858050f3850709fca3e854bdbe3fb2 226 Gene3D G3DSA:1.20.120.1630 49 225 1.6E-12 T 14-10-2018 PhaeoP54_01700 9f858050f3850709fca3e854bdbe3fb2 226 Pfam PF06966 Protein of unknown function (DUF1295) 103 218 1.9E-19 T 14-10-2018 IPR010721 Protein of unknown function DUF1295 PhaeoP54_01784 5bba43aa26d207da3766ab33181f76db 337 SUPERFAMILY SSF141371 218 303 4.12E-11 T 14-10-2018 PhaeoP54_01784 5bba43aa26d207da3766ab33181f76db 337 Gene3D G3DSA:2.40.10.220 215 304 6.0E-9 T 14-10-2018 PhaeoP54_01784 5bba43aa26d207da3766ab33181f76db 337 Pfam PF07238 PilZ domain 218 307 2.7E-14 T 14-10-2018 IPR009875 PilZ domain GO:0035438 PhaeoP54_03820 bdadd5b2a9098e165840d466bccc4e02 129 Pfam PF12599 Protein of unknown function (DUF3768) 44 128 2.4E-28 T 14-10-2018 IPR022243 Protein of unknown function DUF3768 PhaeoP54_01676 489d31d28c5f9fdd0665fc1db7a2f322 156 SUPERFAMILY SSF55040 10 154 3.66E-61 T 14-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 PhaeoP54_01676 489d31d28c5f9fdd0665fc1db7a2f322 156 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 3 151 3.8E-62 T 14-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 PhaeoP54_01676 489d31d28c5f9fdd0665fc1db7a2f322 156 Gene3D G3DSA:3.30.70.640 1 156 2.5E-68 T 14-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 PhaeoP54_01676 489d31d28c5f9fdd0665fc1db7a2f322 156 Pfam PF01967 MoaC family 14 149 2.7E-55 T 14-10-2018 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 PhaeoP54_01676 489d31d28c5f9fdd0665fc1db7a2f322 156 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase [moaC]. 1 156 35.325 T 14-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 PhaeoP54_01058 28f05a4da33176443b8ed61ed3048afc 148 Pfam PF04403 Paraquat-inducible protein A 6 137 6.8E-16 T 14-10-2018 IPR007498 Intermembrane transport protein PqiA-like PhaeoP54_00343 0fa78cacb65a86d8dfa472f08d8e70a4 229 Gene3D G3DSA:3.40.50.410 20 225 3.2E-20 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily PhaeoP54_00343 0fa78cacb65a86d8dfa472f08d8e70a4 229 Pfam PF06707 Protein of unknown function (DUF1194) 21 217 8.8E-69 T 14-10-2018 IPR010607 Protein of unknown function DUF1194 PhaeoP54_00343 0fa78cacb65a86d8dfa472f08d8e70a4 229 SUPERFAMILY SSF53300 20 215 5.09E-28 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily PhaeoP54_01135 fe95eeb2e54faf2c99b167418576eda0 236 Gene3D G3DSA:3.40.190.10 109 191 6.8E-67 T 14-10-2018 PhaeoP54_01135 fe95eeb2e54faf2c99b167418576eda0 236 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 23 230 9.0E-50 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PhaeoP54_01135 fe95eeb2e54faf2c99b167418576eda0 236 SUPERFAMILY SSF53850 1 230 1.27E-54 T 14-10-2018 PhaeoP54_01135 fe95eeb2e54faf2c99b167418576eda0 236 Gene3D G3DSA:3.40.190.10 26 230 6.8E-67 T 14-10-2018 PhaeoP54_01135 fe95eeb2e54faf2c99b167418576eda0 236 SMART SM00062 22 234 7.9E-43 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PhaeoP54_02751 4b85805d237ac7ce2188630557bd442a 135 SMART SM00448 2 127 3.7E-12 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PhaeoP54_02751 4b85805d237ac7ce2188630557bd442a 135 SUPERFAMILY SSF52172 1 133 9.96E-20 T 14-10-2018 IPR011006 CheY-like superfamily PhaeoP54_02751 4b85805d237ac7ce2188630557bd442a 135 Gene3D G3DSA:3.40.50.2300 1 135 9.5E-18 T 14-10-2018 PhaeoP54_02751 4b85805d237ac7ce2188630557bd442a 135 Pfam PF00072 Response regulator receiver domain 4 126 3.4E-10 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PhaeoP54_01494 62490b9729088c0a5732e8e88a45654e 399 Pfam PF13795 HupE / UreJ protein 221 367 3.1E-47 T 14-10-2018 IPR032809 Putative HupE/UreJ protein PhaeoP54_01318 1b2d180f76cf4dbf875466484483caa3 713 Gene3D G3DSA:3.40.630.30 463 572 8.1E-6 T 14-10-2018 PhaeoP54_01318 1b2d180f76cf4dbf875466484483caa3 713 Pfam PF09924 Uncharacterised conserved protein (DUF2156) 365 592 7.7E-37 T 14-10-2018 IPR024320 Phosphatidylglycerol lysyltransferase, C-terminal PhaeoP54_01318 1b2d180f76cf4dbf875466484483caa3 713 SUPERFAMILY SSF55729 440 593 7.83E-15 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase PhaeoP54_02858 8d55bcf794f76749ffb3aecdf90b3563 261 SUPERFAMILY SSF53474 2 248 3.41E-54 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold PhaeoP54_02858 8d55bcf794f76749ffb3aecdf90b3563 261 Pfam PF07859 alpha/beta hydrolase fold 65 179 6.3E-11 T 14-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 PhaeoP54_02858 8d55bcf794f76749ffb3aecdf90b3563 261 Gene3D G3DSA:3.40.50.1820 19 261 1.7E-66 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold PhaeoP54_03599 3e0c53b3ade42a8a634049f132831e38 703 Pfam PF13807 G-rich domain on putative tyrosine kinase 368 442 2.4E-9 T 14-10-2018 IPR032807 Tyrosine kinase, G-rich domain PhaeoP54_03599 3e0c53b3ade42a8a634049f132831e38 703 SUPERFAMILY SSF52540 509 686 1.15E-30 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_03599 3e0c53b3ade42a8a634049f132831e38 703 Pfam PF02706 Chain length determinant protein 28 118 7.9E-11 T 14-10-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 PhaeoP54_03599 3e0c53b3ade42a8a634049f132831e38 703 TIGRFAM TIGR01007 eps_fam: capsular exopolysaccharide family 492 687 5.7E-36 T 14-10-2018 IPR005702 Exopolysaccharide synthesis protein GO:0045226 PhaeoP54_03599 3e0c53b3ade42a8a634049f132831e38 703 Gene3D G3DSA:3.40.50.300 440 702 2.4E-54 T 14-10-2018 PhaeoP54_03599 3e0c53b3ade42a8a634049f132831e38 703 Pfam PF13614 AAA domain 510 630 2.1E-9 T 14-10-2018 IPR025669 AAA domain PhaeoP54_00046 729e85af878ef854ff649e46b67d21e6 503 Gene3D G3DSA:3.40.309.10 268 461 4.5E-172 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 PhaeoP54_00046 729e85af878ef854ff649e46b67d21e6 503 SUPERFAMILY SSF53720 22 488 2.88E-162 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 PhaeoP54_00046 729e85af878ef854ff649e46b67d21e6 503 Gene3D G3DSA:3.40.605.10 38 486 4.5E-172 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 PhaeoP54_00046 729e85af878ef854ff649e46b67d21e6 503 Pfam PF00171 Aldehyde dehydrogenase family 38 488 1.7E-170 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 PhaeoP54_00046 729e85af878ef854ff649e46b67d21e6 503 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 264 271 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 PhaeoP54_00046 729e85af878ef854ff649e46b67d21e6 503 TIGRFAM TIGR02299 HpaE: 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase 26 501 1.5E-229 T 14-10-2018 IPR011985 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase GO:0018480|GO:1901023 PhaeoP54_03264 ff69e926deb56649ab8b31ad7a45616d 442 SUPERFAMILY SSF75304 3 441 2.49E-111 T 14-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 PhaeoP54_03264 ff69e926deb56649ab8b31ad7a45616d 442 Pfam PF01425 Amidase 26 431 2.7E-72 T 14-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 PhaeoP54_03264 ff69e926deb56649ab8b31ad7a45616d 442 ProSitePatterns PS00571 Amidases signature. 153 184 - T 14-10-2018 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921|Reactome: R-HSA-2142753 PhaeoP54_03264 ff69e926deb56649ab8b31ad7a45616d 442 Gene3D G3DSA:3.90.1300.10 8 442 1.6E-109 T 14-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 PhaeoP54_02647 a40962f7c2e55e4a30c6ac7b7f07d59f 191 SUPERFAMILY SSF53474 5 189 7.77E-40 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold PhaeoP54_02647 a40962f7c2e55e4a30c6ac7b7f07d59f 191 PRINTS PR00111 Alpha/beta hydrolase fold signature 134 148 1.9E-6 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 PhaeoP54_02647 a40962f7c2e55e4a30c6ac7b7f07d59f 191 PRINTS PR00111 Alpha/beta hydrolase fold signature 32 45 1.9E-6 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 PhaeoP54_02647 a40962f7c2e55e4a30c6ac7b7f07d59f 191 PRINTS PR00111 Alpha/beta hydrolase fold signature 18 31 1.9E-6 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 PhaeoP54_02647 a40962f7c2e55e4a30c6ac7b7f07d59f 191 Pfam PF12697 Alpha/beta hydrolase family 4 182 8.6E-12 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 PhaeoP54_02647 a40962f7c2e55e4a30c6ac7b7f07d59f 191 Gene3D G3DSA:3.40.50.1820 1 191 1.2E-36 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold PhaeoP54_04040 a11369299c1aeca568eb68bf19a3b0da 309 PRINTS PR00164 ABC-2 type transport system membrane protein signature 158 183 2.7E-15 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 PhaeoP54_04040 a11369299c1aeca568eb68bf19a3b0da 309 PRINTS PR00164 ABC-2 type transport system membrane protein signature 114 136 2.7E-15 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 PhaeoP54_04040 a11369299c1aeca568eb68bf19a3b0da 309 PRINTS PR00164 ABC-2 type transport system membrane protein signature 228 247 2.7E-15 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 PhaeoP54_04040 a11369299c1aeca568eb68bf19a3b0da 309 PRINTS PR00164 ABC-2 type transport system membrane protein signature 83 104 2.7E-15 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 PhaeoP54_04040 a11369299c1aeca568eb68bf19a3b0da 309 PRINTS PR00164 ABC-2 type transport system membrane protein signature 248 267 2.7E-15 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 PhaeoP54_04040 a11369299c1aeca568eb68bf19a3b0da 309 Pfam PF01061 ABC-2 type transporter 65 271 3.2E-16 T 14-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 PhaeoP54_02666 09857ec63509c49c0986ebb896fc75a2 414 SUPERFAMILY SSF81342 162 397 3.53E-41 T 14-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 PhaeoP54_02666 09857ec63509c49c0986ebb896fc75a2 414 TIGRFAM TIGR01583 formate-DH-gamm: formate dehydrogenase, gamma subunit 165 393 4.4E-40 T 14-10-2018 IPR006471 Formate dehydrogenase, gamma subunit GO:0008863|GO:0009326|GO:0016021|GO:0045333 PhaeoP54_02666 09857ec63509c49c0986ebb896fc75a2 414 Gene3D G3DSA:1.20.950.20 160 400 3.3E-58 T 14-10-2018 PhaeoP54_02666 09857ec63509c49c0986ebb896fc75a2 414 Pfam PF01292 Prokaryotic cytochrome b561 168 370 4.8E-17 T 14-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 PhaeoP54_02743 6705d01cc2f4506a10026f55280ad6ee 179 Gene3D G3DSA:3.30.450.40 18 178 3.3E-8 T 14-10-2018 IPR029016 GAF-like domain superfamily PhaeoP54_02743 6705d01cc2f4506a10026f55280ad6ee 179 SUPERFAMILY SSF55781 37 167 7.46E-8 T 14-10-2018 PhaeoP54_00203 cf925ff66783e1f1158f3dc69383421b 168 Gene3D G3DSA:2.80.10.50 9 153 4.4E-6 T 14-10-2018 PhaeoP54_00203 cf925ff66783e1f1158f3dc69383421b 168 SUPERFAMILY SSF50405 20 143 1.5E-5 T 14-10-2018 IPR008999 Actin-crosslinking PhaeoP54_03772 456eed97a94a86c5e0d019f161023cea 128 Gene3D G3DSA:1.10.10.10 1 70 2.7E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_03772 456eed97a94a86c5e0d019f161023cea 128 Gene3D G3DSA:3.30.1490.190 71 128 5.7E-12 T 14-10-2018 PhaeoP54_03772 456eed97a94a86c5e0d019f161023cea 128 SUPERFAMILY SSF46785 5 124 5.46E-24 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_03772 456eed97a94a86c5e0d019f161023cea 128 Pfam PF01475 Ferric uptake regulator family 7 119 1.6E-9 T 14-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 PhaeoP54_02066 88779c7758045703a91305d0d127bb17 240 Pfam PF13778 Domain of unknown function (DUF4174) 132 233 1.3E-18 T 14-10-2018 IPR025232 Domain of unknown function DUF4174 PhaeoP54_00895 00d29a56f86fc55c959a26557a78c1d1 240 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 2 237 35.842 T 14-10-2018 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 PhaeoP54_00895 00d29a56f86fc55c959a26557a78c1d1 240 Pfam PF00977 Histidine biosynthesis protein 3 229 6.2E-79 T 14-10-2018 IPR006062 Histidine biosynthesis GO:0000105 PhaeoP54_00895 00d29a56f86fc55c959a26557a78c1d1 240 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 3 233 3.7E-79 T 14-10-2018 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 PhaeoP54_00895 00d29a56f86fc55c959a26557a78c1d1 240 SUPERFAMILY SSF51366 1 238 4.32E-72 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 PhaeoP54_00895 00d29a56f86fc55c959a26557a78c1d1 240 Gene3D G3DSA:3.20.20.70 2 240 3.3E-85 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PhaeoP54_03029 ebdbcf680e893501d578e7ff116b4ea7 235 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 206 39.061 T 14-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 PhaeoP54_03029 ebdbcf680e893501d578e7ff116b4ea7 235 Pfam PF00189 Ribosomal protein S3, C-terminal domain 120 202 3.4E-39 T 14-10-2018 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PhaeoP54_03029 ebdbcf680e893501d578e7ff116b4ea7 235 SMART SM00322 60 125 8.2E-9 T 14-10-2018 IPR004087 K Homology domain GO:0003676 PhaeoP54_03029 ebdbcf680e893501d578e7ff116b4ea7 235 SUPERFAMILY SSF54821 108 206 1.26E-39 T 14-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PhaeoP54_03029 ebdbcf680e893501d578e7ff116b4ea7 235 Pfam PF07650 KH domain 39 111 5.3E-20 T 14-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PhaeoP54_03029 ebdbcf680e893501d578e7ff116b4ea7 235 Gene3D G3DSA:3.30.1140.32 108 208 1.4E-43 T 14-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PhaeoP54_03029 ebdbcf680e893501d578e7ff116b4ea7 235 SUPERFAMILY SSF54814 2 106 4.97E-38 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 PhaeoP54_03029 ebdbcf680e893501d578e7ff116b4ea7 235 Gene3D G3DSA:3.30.300.20 17 107 4.3E-31 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta PhaeoP54_03029 ebdbcf680e893501d578e7ff116b4ea7 235 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 209 2.8E-94 T 14-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 PhaeoP54_03029 ebdbcf680e893501d578e7ff116b4ea7 235 ProSitePatterns PS00548 Ribosomal protein S3 signature. 163 197 - T 14-10-2018 IPR018280 Ribosomal protein S3, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PhaeoP54_01360 a793668ea8e9660b9886d497da1b6eb0 387 Gene3D G3DSA:2.40.110.10 123 237 8.6E-33 T 14-10-2018 PhaeoP54_01360 a793668ea8e9660b9886d497da1b6eb0 387 SUPERFAMILY SSF56645 5 243 9.16E-66 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 PhaeoP54_01360 a793668ea8e9660b9886d497da1b6eb0 387 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 234 382 4.5E-24 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PhaeoP54_01360 a793668ea8e9660b9886d497da1b6eb0 387 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 123 221 6.9E-24 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 PhaeoP54_01360 a793668ea8e9660b9886d497da1b6eb0 387 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 125 137 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 PhaeoP54_01360 a793668ea8e9660b9886d497da1b6eb0 387 Gene3D G3DSA:1.20.140.10 238 383 3.6E-25 T 14-10-2018 PhaeoP54_01360 a793668ea8e9660b9886d497da1b6eb0 387 SUPERFAMILY SSF47203 233 382 1.37E-26 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 PhaeoP54_01360 a793668ea8e9660b9886d497da1b6eb0 387 Gene3D G3DSA:1.10.540.10 2 121 1.1E-28 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 PhaeoP54_01360 a793668ea8e9660b9886d497da1b6eb0 387 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 10 118 7.6E-27 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 PhaeoP54_03047 b960387fcede1dadfa42f7afa703f1c3 230 SUPERFAMILY SSF51182 40 227 5.57E-34 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily PhaeoP54_03047 b960387fcede1dadfa42f7afa703f1c3 230 Gene3D G3DSA:2.60.120.10 29 229 9.5E-26 T 14-10-2018 IPR014710 RmlC-like jelly roll fold PhaeoP54_03047 b960387fcede1dadfa42f7afa703f1c3 230 Pfam PF02678 Pirin 62 128 3.9E-12 T 14-10-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 PhaeoP54_00585 61962f90c4e9da7ccbd3cdf50f790467 468 Pfam PF13629 Pilus formation protein N terminal region 38 107 1.1E-18 T 14-10-2018 IPR032789 Pilus formation protein, N-terminal PhaeoP54_00585 61962f90c4e9da7ccbd3cdf50f790467 468 PRINTS PR00811 Bacterial general secretion pathway protein D signature 379 397 2.0E-9 T 14-10-2018 IPR001775 GspD/PilQ family PhaeoP54_00585 61962f90c4e9da7ccbd3cdf50f790467 468 PRINTS PR00811 Bacterial general secretion pathway protein D signature 174 184 2.0E-9 T 14-10-2018 IPR001775 GspD/PilQ family PhaeoP54_00585 61962f90c4e9da7ccbd3cdf50f790467 468 PRINTS PR00811 Bacterial general secretion pathway protein D signature 250 274 2.0E-9 T 14-10-2018 IPR001775 GspD/PilQ family PhaeoP54_00585 61962f90c4e9da7ccbd3cdf50f790467 468 Pfam PF00263 Bacterial type II and III secretion system protein 254 414 4.6E-41 T 14-10-2018 IPR004846 Type II/III secretion system GO:0009306 PhaeoP54_01461 675ba4a9501d5bdaec37fde5a5a62d56 168 PIRSF PIRSF006162 1 164 7.4E-44 T 14-10-2018 IPR026037 Phosphatidylglycerophosphatase A KEGG: 00564+3.1.3.27|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 PhaeoP54_01461 675ba4a9501d5bdaec37fde5a5a62d56 168 SUPERFAMILY SSF101307 4 157 1.31E-34 T 14-10-2018 IPR036681 PgpA-like superfamily GO:0006629|GO:0008962 PhaeoP54_01461 675ba4a9501d5bdaec37fde5a5a62d56 168 Pfam PF04608 Phosphatidylglycerophosphatase A 9 158 1.4E-45 T 14-10-2018 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 PhaeoP54_00654 fe7252b737e910f46358e4a28289ada4 298 Gene3D G3DSA:3.60.15.10 23 262 3.0E-34 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like PhaeoP54_00654 fe7252b737e910f46358e4a28289ada4 298 Pfam PF13483 Beta-lactamase superfamily domain 34 225 2.4E-21 T 14-10-2018 PhaeoP54_00654 fe7252b737e910f46358e4a28289ada4 298 SUPERFAMILY SSF56281 33 230 2.61E-18 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like PhaeoP54_01166 ed4c7ad6879f1ad6ff0f31cf5b5eb948 225 Pfam PF04012 PspA/IM30 family 14 172 1.4E-14 T 14-10-2018 IPR007157 PspA/IM30 PhaeoP54_03597 3d16f4c7b7804e749103797389e9f83a 428 Pfam PF04932 O-Antigen ligase 206 354 5.7E-11 T 14-10-2018 IPR007016 O-antigen ligase-related PhaeoP54_01877 9985771f7724ceb303d007143c0f6d69 206 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 3 198 1.4E-55 T 14-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 PhaeoP54_01877 9985771f7724ceb303d007143c0f6d69 206 Pfam PF01914 MarC family integral membrane protein 5 199 3.6E-59 T 14-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 PhaeoP54_00434 c3875707ecb4e2c5abac0a6bbb58501b 142 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 3 139 3.4E-28 T 14-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain PhaeoP54_00434 c3875707ecb4e2c5abac0a6bbb58501b 142 SUPERFAMILY SSF54534 4 141 5.7E-43 T 14-10-2018 PhaeoP54_00434 c3875707ecb4e2c5abac0a6bbb58501b 142 Gene3D G3DSA:3.10.50.40 2 142 8.5E-52 T 14-10-2018 PhaeoP54_01738 643507de44f72a2e7ced9176889c5214 153 Gene3D G3DSA:3.40.30.10 3 152 4.8E-49 T 14-10-2018 PhaeoP54_01738 643507de44f72a2e7ced9176889c5214 153 SUPERFAMILY SSF52833 1 153 9.14E-52 T 14-10-2018 IPR036249 Thioredoxin-like superfamily PhaeoP54_01738 643507de44f72a2e7ced9176889c5214 153 Pfam PF00578 AhpC/TSA family 5 132 3.3E-38 T 14-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 PhaeoP54_01738 643507de44f72a2e7ced9176889c5214 153 PIRSF PIRSF000239 3 153 1.4E-21 T 14-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 PhaeoP54_00894 ea875af0e1fdb8fe3cdfad9bf598461d 148 Gene3D G3DSA:3.30.310.70 23 145 1.1E-14 T 14-10-2018 IPR035923 TT1751-like domain superfamily PhaeoP54_00894 ea875af0e1fdb8fe3cdfad9bf598461d 148 Pfam PF03625 Domain of unknown function DUF302 54 116 1.8E-18 T 14-10-2018 IPR005180 Domain of unknown function DUF302 PhaeoP54_00894 ea875af0e1fdb8fe3cdfad9bf598461d 148 SUPERFAMILY SSF103247 22 146 1.57E-34 T 14-10-2018 IPR035923 TT1751-like domain superfamily PhaeoP54_00749 8d8359e06eb09b6132028b4fd53b5537 444 PRINTS PR00131 Glycosyl hydrolase family 1 signature 286 300 8.9E-20 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 PhaeoP54_00749 8d8359e06eb09b6132028b4fd53b5537 444 PRINTS PR00131 Glycosyl hydrolase family 1 signature 413 425 8.9E-20 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 PhaeoP54_00749 8d8359e06eb09b6132028b4fd53b5537 444 PRINTS PR00131 Glycosyl hydrolase family 1 signature 368 379 8.9E-20 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 PhaeoP54_00749 8d8359e06eb09b6132028b4fd53b5537 444 PRINTS PR00131 Glycosyl hydrolase family 1 signature 389 406 8.9E-20 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 PhaeoP54_00749 8d8359e06eb09b6132028b4fd53b5537 444 PRINTS PR00131 Glycosyl hydrolase family 1 signature 348 356 8.9E-20 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 PhaeoP54_00749 8d8359e06eb09b6132028b4fd53b5537 444 Pfam PF00232 Glycosyl hydrolase family 1 7 435 2.3E-138 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 PhaeoP54_00749 8d8359e06eb09b6132028b4fd53b5537 444 Gene3D G3DSA:3.20.20.80 2 444 5.5E-154 T 14-10-2018 PhaeoP54_00749 8d8359e06eb09b6132028b4fd53b5537 444 TIGRFAM TIGR03356 BGL: beta-galactosidase 9 434 2.3E-169 T 14-10-2018 IPR017736 Glycoside hydrolase, family 1, beta-glucosidase GO:0008422|GO:0030245 KEGG: 00460+3.2.1.21|KEGG: 00500+3.2.1.21|KEGG: 00940+3.2.1.21|MetaCyc: PWY-3121|MetaCyc: PWY-5176|MetaCyc: PWY-6002|MetaCyc: PWY-6788|MetaCyc: PWY-7091|MetaCyc: PWY-7092|MetaCyc: PWY-7913 PhaeoP54_00749 8d8359e06eb09b6132028b4fd53b5537 444 SUPERFAMILY SSF51445 8 440 6.94E-146 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily PhaeoP54_00749 8d8359e06eb09b6132028b4fd53b5537 444 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 348 356 - T 14-10-2018 IPR018120 Glycoside hydrolase family 1, active site PhaeoP54_03459 0dcab2a3ad7622c51f5fedc4b9e544f0 200 Gene3D G3DSA:3.30.1370.110 72 200 4.4E-38 T 14-10-2018 PhaeoP54_03459 0dcab2a3ad7622c51f5fedc4b9e544f0 200 Pfam PF01713 Smr domain 107 197 9.5E-22 T 14-10-2018 IPR002625 Smr domain PhaeoP54_03459 0dcab2a3ad7622c51f5fedc4b9e544f0 200 SUPERFAMILY SSF160443 105 197 1.16E-15 T 14-10-2018 IPR036063 Smr domain superfamily PhaeoP54_03459 0dcab2a3ad7622c51f5fedc4b9e544f0 200 SMART SM00463 104 197 6.0E-5 T 14-10-2018 IPR002625 Smr domain PhaeoP54_02613 1e5893410d18b466bd9b149f04e6da21 54 Pfam PF07043 Protein of unknown function (DUF1328) 6 44 1.8E-12 T 14-10-2018 IPR009760 Protein of unknown function DUF1328 GO:0005886 PhaeoP54_02613 1e5893410d18b466bd9b149f04e6da21 54 Hamap MF_01361 UPF0391 membrane protein YtjA [ytjA]. 1 51 18.845 T 14-10-2018 IPR009760 Protein of unknown function DUF1328 GO:0005886 PhaeoP54_02613 1e5893410d18b466bd9b149f04e6da21 54 PIRSF PIRSF036466 1 54 1.8E-18 T 14-10-2018 IPR009760 Protein of unknown function DUF1328 GO:0005886 PhaeoP54_02318 884f519951336d81c6d649c9e311cd2d 650 Pfam PF05170 AsmA family 289 532 7.1E-16 T 14-10-2018 IPR007844 AsmA PhaeoP54_02318 884f519951336d81c6d649c9e311cd2d 650 Pfam PF05170 AsmA family 8 163 2.0E-10 T 14-10-2018 IPR007844 AsmA PhaeoP54_03567 2a1747c0f6390cf42ac41128eec24442 314 Gene3D G3DSA:3.40.50.1100 7 303 1.4E-76 T 14-10-2018 PhaeoP54_03567 2a1747c0f6390cf42ac41128eec24442 314 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 40 53 - T 14-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 PhaeoP54_03567 2a1747c0f6390cf42ac41128eec24442 314 SUPERFAMILY SSF53686 4 300 3.01E-65 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme PhaeoP54_03567 2a1747c0f6390cf42ac41128eec24442 314 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 15 299 5.2E-59 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme PhaeoP54_03567 2a1747c0f6390cf42ac41128eec24442 314 Gene3D G3DSA:3.40.50.1100 48 142 1.4E-76 T 14-10-2018 PhaeoP54_01383 2ca0f217a164696c16f22910b069af30 208 Pfam PF12804 MobA-like NTP transferase domain 7 168 4.8E-35 T 14-10-2018 IPR025877 MobA-like NTP transferase PhaeoP54_01383 2ca0f217a164696c16f22910b069af30 208 Gene3D G3DSA:3.90.550.10 2 203 8.5E-47 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PhaeoP54_01383 2ca0f217a164696c16f22910b069af30 208 SUPERFAMILY SSF53448 5 201 3.6E-26 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PhaeoP54_00545 d0f9a9db4a621adf6ce98ae349416b5e 231 PIRSF PIRSF000851 1 231 2.4E-91 T 14-10-2018 IPR026027 Phosphatidylcholine synthase Pcs KEGG: 00564+2.7.8.24|MetaCyc: PWY-6826 PhaeoP54_00545 d0f9a9db4a621adf6ce98ae349416b5e 231 Pfam PF01066 CDP-alcohol phosphatidyltransferase 12 61 1.0E-5 T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 PhaeoP54_00545 d0f9a9db4a621adf6ce98ae349416b5e 231 Gene3D G3DSA:1.20.120.1760 7 173 6.7E-6 T 14-10-2018 PhaeoP54_03074 573910590b7acb868f8a776edb5f7e70 291 Gene3D G3DSA:1.10.1040.50 190 291 1.1E-34 T 14-10-2018 PhaeoP54_03074 573910590b7acb868f8a776edb5f7e70 291 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 187 282 1.5E-33 T 14-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 PhaeoP54_03074 573910590b7acb868f8a776edb5f7e70 291 Gene3D G3DSA:3.40.50.720 1 189 4.0E-65 T 14-10-2018 PhaeoP54_03074 573910590b7acb868f8a776edb5f7e70 291 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 183 208 - T 14-10-2018 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 PhaeoP54_03074 573910590b7acb868f8a776edb5f7e70 291 PIRSF PIRSF000105 1 291 1.8E-80 T 14-10-2018 IPR022694 3-hydroxyacyl-CoA dehydrogenase GO:0003857|GO:0006631|GO:0055114|GO:0070403 PhaeoP54_03074 573910590b7acb868f8a776edb5f7e70 291 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 5 183 2.1E-60 T 14-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 PhaeoP54_03074 573910590b7acb868f8a776edb5f7e70 291 SUPERFAMILY SSF51735 1 185 1.97E-57 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PhaeoP54_03074 573910590b7acb868f8a776edb5f7e70 291 SUPERFAMILY SSF48179 185 286 9.35E-33 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 PhaeoP54_03128 e58e510d7f4c5b94f346fc1b9a179d56 115 Gene3D G3DSA:1.10.10.10 2 106 4.6E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_03128 e58e510d7f4c5b94f346fc1b9a179d56 115 SUPERFAMILY SSF46785 2 104 1.79E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_03128 e58e510d7f4c5b94f346fc1b9a179d56 115 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 28 39 1.3E-11 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 PhaeoP54_03128 e58e510d7f4c5b94f346fc1b9a179d56 115 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 56 71 1.3E-11 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 PhaeoP54_03128 e58e510d7f4c5b94f346fc1b9a179d56 115 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 9 24 1.3E-11 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 PhaeoP54_03128 e58e510d7f4c5b94f346fc1b9a179d56 115 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 41 56 1.3E-11 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 PhaeoP54_03128 e58e510d7f4c5b94f346fc1b9a179d56 115 SMART SM00418 7 85 2.6E-16 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 PhaeoP54_03128 e58e510d7f4c5b94f346fc1b9a179d56 115 Pfam PF12840 Helix-turn-helix domain 6 65 4.6E-13 T 14-10-2018 PhaeoP54_00809 e9ca3cb77c1ce493a11a5e97172c3bcc 305 Gene3D G3DSA:3.20.20.70 6 301 8.1E-103 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PhaeoP54_00809 e9ca3cb77c1ce493a11a5e97172c3bcc 305 Pfam PF05853 beta-keto acid cleavage enzyme 9 297 6.1E-98 T 14-10-2018 IPR008567 3-keto-5-aminohexanoate cleavage enzyme GO:0016740|GO:0019475 KEGG: 00310+2.3.1.247 PhaeoP54_02695 36ea584a701e9318375b6b4bd0a71e84 417 ProSitePatterns PS01037 Bacterial extracellular solute-binding proteins, family 1 signature. 133 150 - T 14-10-2018 IPR006061 Solute-binding family 1, conserved site GO:0055085 PhaeoP54_02695 36ea584a701e9318375b6b4bd0a71e84 417 Pfam PF13416 Bacterial extracellular solute-binding protein 43 332 4.2E-34 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein PhaeoP54_02695 36ea584a701e9318375b6b4bd0a71e84 417 SUPERFAMILY SSF53850 22 410 2.9E-65 T 14-10-2018 PhaeoP54_02695 36ea584a701e9318375b6b4bd0a71e84 417 Gene3D G3DSA:3.40.190.10 134 401 4.3E-59 T 14-10-2018 PhaeoP54_02695 36ea584a701e9318375b6b4bd0a71e84 417 Gene3D G3DSA:3.40.190.10 44 346 4.3E-59 T 14-10-2018 PhaeoP54_02949 eaa274cd3efa1d69a53eca170b2611ea 300 Pfam PF06724 Domain of Unknown Function (DUF1206) 211 280 7.6E-14 T 14-10-2018 IPR009597 Domain of unknown function DUF1206 PhaeoP54_02949 eaa274cd3efa1d69a53eca170b2611ea 300 Pfam PF06724 Domain of Unknown Function (DUF1206) 41 106 6.1E-10 T 14-10-2018 IPR009597 Domain of unknown function DUF1206 PhaeoP54_02949 eaa274cd3efa1d69a53eca170b2611ea 300 Pfam PF06724 Domain of Unknown Function (DUF1206) 124 188 6.0E-8 T 14-10-2018 IPR009597 Domain of unknown function DUF1206 PhaeoP54_02505 0c2ab545c51d79c40f58c5ed094e8d25 326 Pfam PF04116 Fatty acid hydroxylase superfamily 174 304 2.7E-20 T 14-10-2018 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0008610|GO:0016491|GO:0055114 PhaeoP54_02788 8600fd4d6d3f40f60e21e3cc6b5b76dd 157 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 34 78 2.8E-15 T 14-10-2018 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 PhaeoP54_02788 8600fd4d6d3f40f60e21e3cc6b5b76dd 157 SUPERFAMILY SSF69118 4 142 1.09E-40 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 PhaeoP54_02788 8600fd4d6d3f40f60e21e3cc6b5b76dd 157 Pfam PF02627 Carboxymuconolactone decarboxylase family 22 93 1.2E-16 T 14-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 PhaeoP54_02788 8600fd4d6d3f40f60e21e3cc6b5b76dd 157 Gene3D G3DSA:1.20.1290.10 1 153 2.2E-45 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 PhaeoP54_02118 e6f2099a376683e0b298cd5f8c04f64f 398 PIRSF PIRSF026508 1 385 3.0E-111 T 14-10-2018 IPR008863 Toxic anion resistance PhaeoP54_02118 e6f2099a376683e0b298cd5f8c04f64f 398 Pfam PF05816 Toxic anion resistance protein (TelA) 47 377 3.2E-108 T 14-10-2018 IPR008863 Toxic anion resistance PhaeoP54_02873 85edb8a580bab6d5bb068bd2e1953d86 201 SUPERFAMILY SSF52016 1 191 2.94E-56 T 14-10-2018 PhaeoP54_02873 85edb8a580bab6d5bb068bd2e1953d86 201 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 1 185 4.0E-77 T 14-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 PhaeoP54_02873 85edb8a580bab6d5bb068bd2e1953d86 201 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 1 201 41.444 T 14-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 PhaeoP54_02873 85edb8a580bab6d5bb068bd2e1953d86 201 Pfam PF00694 Aconitase C-terminal domain 1 123 7.8E-37 T 14-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 PhaeoP54_02873 85edb8a580bab6d5bb068bd2e1953d86 201 Gene3D G3DSA:3.20.19.10 1 175 1.3E-74 T 14-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 PhaeoP54_01613 d8d0d21d566a68148068992e7985f823 311 Gene3D G3DSA:1.10.3720.10 97 305 1.6E-19 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_01613 d8d0d21d566a68148068992e7985f823 311 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 126 307 4.2E-28 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PhaeoP54_01613 d8d0d21d566a68148068992e7985f823 311 SUPERFAMILY SSF161098 103 290 3.66E-26 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_01613 d8d0d21d566a68148068992e7985f823 311 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 36 83 4.6E-13 T 14-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain PhaeoP54_00049 ea63ee1f4f46a9858a47ed8a615942a0 266 Gene3D G3DSA:3.90.850.10 2 265 1.2E-75 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 PhaeoP54_00049 ea63ee1f4f46a9858a47ed8a615942a0 266 SUPERFAMILY SSF56529 1 265 4.97E-71 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 PhaeoP54_00049 ea63ee1f4f46a9858a47ed8a615942a0 266 TIGRFAM TIGR02312 HpaH: 2-oxo-hepta-3-ene-1,7-dioic acid hydratase 7 265 1.2E-114 T 14-10-2018 IPR012690 2-oxo-hepta-4-ene-1,7-dioic acid hydratase GO:0018817|GO:0019439 PhaeoP54_01020 05f01d69c85de0fa09f6d5a97f2310a3 139 Pfam PF02627 Carboxymuconolactone decarboxylase family 45 129 5.3E-14 T 14-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 PhaeoP54_01020 05f01d69c85de0fa09f6d5a97f2310a3 139 Gene3D G3DSA:1.20.1290.10 5 137 1.1E-22 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 PhaeoP54_01020 05f01d69c85de0fa09f6d5a97f2310a3 139 SUPERFAMILY SSF69118 8 135 5.37E-28 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 PhaeoP54_01229 a1e32ece5077b3d290f067a1008cfcde 416 Pfam PF00012 Hsp70 protein 7 224 1.8E-12 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 PhaeoP54_01229 a1e32ece5077b3d290f067a1008cfcde 416 Gene3D G3DSA:3.90.640.10 294 347 8.7E-11 T 14-10-2018 PhaeoP54_01229 a1e32ece5077b3d290f067a1008cfcde 416 Gene3D G3DSA:3.90.640.10 210 223 7.2E-33 T 14-10-2018 PhaeoP54_01229 a1e32ece5077b3d290f067a1008cfcde 416 SUPERFAMILY SSF53067 174 411 1.01E-28 T 14-10-2018 PhaeoP54_01229 a1e32ece5077b3d290f067a1008cfcde 416 PRINTS PR00301 70kDa heat shock protein signature 5 18 7.4E-6 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 PhaeoP54_01229 a1e32ece5077b3d290f067a1008cfcde 416 PRINTS PR00301 70kDa heat shock protein signature 33 45 7.4E-6 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 PhaeoP54_01229 a1e32ece5077b3d290f067a1008cfcde 416 PRINTS PR00301 70kDa heat shock protein signature 366 382 7.4E-6 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 PhaeoP54_01229 a1e32ece5077b3d290f067a1008cfcde 416 SUPERFAMILY SSF53067 6 167 2.03E-26 T 14-10-2018 PhaeoP54_01229 a1e32ece5077b3d290f067a1008cfcde 416 Gene3D G3DSA:3.30.420.40 173 209 7.2E-33 T 14-10-2018 PhaeoP54_01229 a1e32ece5077b3d290f067a1008cfcde 416 Gene3D G3DSA:3.30.420.40 348 397 8.7E-11 T 14-10-2018 PhaeoP54_01229 a1e32ece5077b3d290f067a1008cfcde 416 Gene3D G3DSA:3.30.420.40 7 172 7.2E-33 T 14-10-2018 PhaeoP54_01229 a1e32ece5077b3d290f067a1008cfcde 416 Gene3D G3DSA:3.30.420.40 398 409 8.7E-11 T 14-10-2018 PhaeoP54_00682 05b991ec37ddd643735ead61b8c591e1 321 SUPERFAMILY SSF48179 159 288 9.98E-26 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 PhaeoP54_00682 05b991ec37ddd643735ead61b8c591e1 321 Gene3D G3DSA:1.10.1040.10 159 289 3.9E-23 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 PhaeoP54_00682 05b991ec37ddd643735ead61b8c591e1 321 SUPERFAMILY SSF51735 1 159 1.4E-39 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PhaeoP54_00682 05b991ec37ddd643735ead61b8c591e1 321 Gene3D G3DSA:3.40.50.720 1 158 5.6E-45 T 14-10-2018 PhaeoP54_00682 05b991ec37ddd643735ead61b8c591e1 321 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 2 158 1.5E-38 T 14-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 PhaeoP54_00682 05b991ec37ddd643735ead61b8c591e1 321 PIRSF PIRSF000103 1 287 4.5E-55 T 14-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 PhaeoP54_00682 05b991ec37ddd643735ead61b8c591e1 321 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 161 271 3.5E-23 T 14-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 PhaeoP54_03191 2499c9f577caa70ab399409ee105193b 288 Gene3D G3DSA:3.40.50.300 1 187 3.8E-53 T 14-10-2018 PhaeoP54_03191 2499c9f577caa70ab399409ee105193b 288 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 5 168 5.0E-45 T 14-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain PhaeoP54_03191 2499c9f577caa70ab399409ee105193b 288 SUPERFAMILY SSF52540 2 172 5.76E-31 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_03191 2499c9f577caa70ab399409ee105193b 288 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 207 269 5.1E-7 T 14-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal PhaeoP54_02165 306aa77f8af1ad566daf0931529d7291 146 TIGRFAM TIGR01558 sm_term_P27: putative phage terminase, small subunit, P27 family 25 127 8.0E-15 T 14-10-2018 IPR006448 Putative phage terminase, small subunit, P27 family PhaeoP54_02165 306aa77f8af1ad566daf0931529d7291 146 Pfam PF05119 Phage terminase, small subunit 34 128 7.1E-16 T 14-10-2018 IPR006448 Putative phage terminase, small subunit, P27 family PhaeoP54_03070 e4e1f12e0aedcab64207a621e3358db5 190 ProDom PD007457 TRANSFERASE ADENOSYLTRANSFERASE COBALAMIN ATP:COBIALAMIN ADENOSYLTRANSFERASE PDUO TYPE RELATED ACIDURIA YVQK 13 184 2.0E-77 T 14-10-2018 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 PhaeoP54_03070 e4e1f12e0aedcab64207a621e3358db5 190 TIGRFAM TIGR00636 PduO_Nterm: ATP:cob(I)alamin adenosyltransferase 8 184 2.9E-59 T 14-10-2018 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 PhaeoP54_03070 e4e1f12e0aedcab64207a621e3358db5 190 Gene3D G3DSA:1.20.1200.10 16 188 1.5E-56 T 14-10-2018 IPR036451 Cobalamin adenosyltransferase-like superfamily KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 PhaeoP54_03070 e4e1f12e0aedcab64207a621e3358db5 190 Pfam PF01923 Cobalamin adenosyltransferase 7 173 1.6E-60 T 14-10-2018 IPR016030 Cobalamin adenosyltransferase-like KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 PhaeoP54_03070 e4e1f12e0aedcab64207a621e3358db5 190 SUPERFAMILY SSF89028 6 185 1.12E-60 T 14-10-2018 IPR036451 Cobalamin adenosyltransferase-like superfamily KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 PhaeoP54_02672 61a4f85a99e6aa3d667f648de8d0c0e5 191 Pfam PF11749 Protein of unknown function (DUF3305) 16 155 8.3E-48 T 14-10-2018 IPR021736 Protein of unknown function DUF3305 PhaeoP54_01629 ad611614c21e193aca8c046086e637ab 259 Pfam PF00494 Squalene/phytoene synthase 16 177 1.3E-18 T 14-10-2018 PhaeoP54_01629 ad611614c21e193aca8c046086e637ab 259 Gene3D G3DSA:1.10.600.10 2 223 3.3E-6 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily PhaeoP54_01629 ad611614c21e193aca8c046086e637ab 259 SUPERFAMILY SSF48576 7 252 2.16E-32 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily PhaeoP54_02964 ab865359badd4b5f398c74d1e9453ed7 238 Gene3D G3DSA:3.40.50.300 2 238 9.9E-64 T 14-10-2018 PhaeoP54_02964 ab865359badd4b5f398c74d1e9453ed7 238 Pfam PF00005 ABC transporter 21 165 8.1E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PhaeoP54_02964 ab865359badd4b5f398c74d1e9453ed7 238 SUPERFAMILY SSF52540 4 235 8.31E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_02964 ab865359badd4b5f398c74d1e9453ed7 238 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PhaeoP54_02964 ab865359badd4b5f398c74d1e9453ed7 238 SMART SM00382 29 237 4.8E-5 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_00753 4446b4fb132ed716e6c68c9783ce461b 382 Gene3D G3DSA:1.10.3720.10 135 370 9.6E-44 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_00753 4446b4fb132ed716e6c68c9783ce461b 382 SUPERFAMILY SSF161098 9 382 4.99E-56 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_00753 4446b4fb132ed716e6c68c9783ce461b 382 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 191 376 7.7E-11 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PhaeoP54_03795 f7bcf90aab6d62f0bcb6dea539e56131 265 Pfam PF00950 ABC 3 transport family 6 259 2.1E-66 T 14-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 PhaeoP54_03795 f7bcf90aab6d62f0bcb6dea539e56131 265 Gene3D G3DSA:1.10.3470.10 31 261 1.2E-7 T 14-10-2018 IPR037294 ABC transporter, BtuC-like PhaeoP54_03795 f7bcf90aab6d62f0bcb6dea539e56131 265 SUPERFAMILY SSF81345 2 258 4.45E-38 T 14-10-2018 IPR037294 ABC transporter, BtuC-like PhaeoP54_02686 3b98acc6c6a25568f442325baa2fb4d9 133 Pfam PF04138 GtrA-like protein 15 128 3.5E-15 T 14-10-2018 IPR007267 GtrA-like protein GO:0000271|GO:0016021 PhaeoP54_03478 c3b9c43da2d94ef0c35784ecc7e80ee3 198 SUPERFAMILY SSF109604 6 195 7.68E-61 T 14-10-2018 PhaeoP54_03478 c3b9c43da2d94ef0c35784ecc7e80ee3 198 Gene3D G3DSA:1.10.3210.10 2 197 7.6E-54 T 14-10-2018 PhaeoP54_01313 1ccda6bb692300912dc29566024e6b27 209 SUPERFAMILY SSF47616 83 185 3.06E-13 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily PhaeoP54_01313 1ccda6bb692300912dc29566024e6b27 209 Gene3D G3DSA:3.40.30.10 4 83 1.2E-31 T 14-10-2018 PhaeoP54_01313 1ccda6bb692300912dc29566024e6b27 209 SUPERFAMILY SSF52833 3 82 1.34E-12 T 14-10-2018 IPR036249 Thioredoxin-like superfamily PhaeoP54_01313 1ccda6bb692300912dc29566024e6b27 209 Gene3D G3DSA:1.20.1050.10 84 186 1.2E-31 T 14-10-2018 PhaeoP54_01313 1ccda6bb692300912dc29566024e6b27 209 Pfam PF13417 Glutathione S-transferase, N-terminal domain 4 83 2.9E-10 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 PhaeoP54_01313 1ccda6bb692300912dc29566024e6b27 209 Pfam PF00043 Glutathione S-transferase, C-terminal domain 128 183 2.5E-6 T 14-10-2018 IPR004046 Glutathione S-transferase, C-terminal PhaeoP54_00663 b04da72e074ee878818b77bee48284a8 66 Pfam PF01632 Ribosomal protein L35 2 60 6.0E-21 T 14-10-2018 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PhaeoP54_00663 b04da72e074ee878818b77bee48284a8 66 SUPERFAMILY SSF143034 2 64 3.66E-22 T 14-10-2018 IPR037229 Ribosomal protein L35 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PhaeoP54_00663 b04da72e074ee878818b77bee48284a8 66 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 64 1.7E-21 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 PhaeoP54_00663 b04da72e074ee878818b77bee48284a8 66 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 64 16.328 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 PhaeoP54_00663 b04da72e074ee878818b77bee48284a8 66 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 31 - T 14-10-2018 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 PhaeoP54_00663 b04da72e074ee878818b77bee48284a8 66 PRINTS PR00064 Ribosomal protein L35 signature 36 54 1.3E-9 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 PhaeoP54_00663 b04da72e074ee878818b77bee48284a8 66 PRINTS PR00064 Ribosomal protein L35 signature 3 20 1.3E-9 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 PhaeoP54_00663 b04da72e074ee878818b77bee48284a8 66 PRINTS PR00064 Ribosomal protein L35 signature 21 35 1.3E-9 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 PhaeoP54_00663 b04da72e074ee878818b77bee48284a8 66 Gene3D G3DSA:2.40.50.530 1 65 9.9E-24 T 14-10-2018 PhaeoP54_02507 1394b62f8c7f41f4bb81a50a45968a9c 513 Pfam PF12796 Ankyrin repeats (3 copies) 194 275 1.7E-7 T 14-10-2018 IPR020683 Ankyrin repeat-containing domain PhaeoP54_02507 1394b62f8c7f41f4bb81a50a45968a9c 513 Gene3D G3DSA:1.25.40.20 387 483 4.8E-8 T 14-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily PhaeoP54_02507 1394b62f8c7f41f4bb81a50a45968a9c 513 SUPERFAMILY SSF48403 175 481 1.7E-24 T 14-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily PhaeoP54_02507 1394b62f8c7f41f4bb81a50a45968a9c 513 SMART SM00248 318 347 28.0 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 PhaeoP54_02507 1394b62f8c7f41f4bb81a50a45968a9c 513 SMART SM00248 244 273 20.0 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 PhaeoP54_02507 1394b62f8c7f41f4bb81a50a45968a9c 513 SMART SM00248 409 438 3.9 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 PhaeoP54_02507 1394b62f8c7f41f4bb81a50a45968a9c 513 SMART SM00248 187 217 260.0 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 PhaeoP54_02507 1394b62f8c7f41f4bb81a50a45968a9c 513 SMART SM00248 285 315 390.0 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 PhaeoP54_02507 1394b62f8c7f41f4bb81a50a45968a9c 513 SMART SM00248 137 177 930.0 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 PhaeoP54_02507 1394b62f8c7f41f4bb81a50a45968a9c 513 Gene3D G3DSA:1.25.40.20 43 362 1.8E-27 T 14-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily PhaeoP54_01247 8e2cad9adc461df9f4cc3fd6d2f713e5 448 Pfam PF13458 Periplasmic binding protein 44 404 6.4E-63 T 14-10-2018 IPR028081 Leucine-binding protein domain PhaeoP54_01247 8e2cad9adc461df9f4cc3fd6d2f713e5 448 Gene3D G3DSA:3.40.50.2300 94 399 9.5E-84 T 14-10-2018 PhaeoP54_01247 8e2cad9adc461df9f4cc3fd6d2f713e5 448 Gene3D G3DSA:3.40.50.2300 181 406 9.5E-84 T 14-10-2018 PhaeoP54_01247 8e2cad9adc461df9f4cc3fd6d2f713e5 448 SUPERFAMILY SSF53822 44 429 5.05E-77 T 14-10-2018 IPR028082 Periplasmic binding protein-like I PhaeoP54_00797 fbfc47cb87cd39316c5e1b432805c5be 422 Gene3D G3DSA:1.20.1420.20 15 395 2.5E-82 T 14-10-2018 IPR038352 Imelysin-like domain superfamily PhaeoP54_00797 fbfc47cb87cd39316c5e1b432805c5be 422 Pfam PF09375 Imelysin 37 394 1.2E-97 T 14-10-2018 IPR018976 Imelysin-like domain PhaeoP54_03874 b297f521e667a7eab0f15ad5d750244d 256 Gene3D G3DSA:3.10.620.30 2 142 4.3E-10 T 14-10-2018 PhaeoP54_03874 b297f521e667a7eab0f15ad5d750244d 256 SUPERFAMILY SSF54001 25 190 2.94E-16 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily PhaeoP54_03874 b297f521e667a7eab0f15ad5d750244d 256 Pfam PF01841 Transglutaminase-like superfamily 36 135 1.1E-11 T 14-10-2018 IPR002931 Transglutaminase-like PhaeoP54_01841 b99efea6a261b98f2c6194ac7806ff47 588 Pfam PF01476 LysM domain 538 586 2.8E-7 T 14-10-2018 IPR018392 LysM domain PhaeoP54_01841 b99efea6a261b98f2c6194ac7806ff47 588 SMART SM00257 537 586 3.5E-6 T 14-10-2018 IPR018392 LysM domain PhaeoP54_01841 b99efea6a261b98f2c6194ac7806ff47 588 Gene3D G3DSA:3.10.350.10 538 584 9.4E-12 T 14-10-2018 IPR036779 LysM domain superfamily PhaeoP54_03001 07de55da0314281d9714cecf53fc018e 465 Gene3D G3DSA:2.30.42.10 265 362 2.7E-16 T 14-10-2018 PhaeoP54_03001 07de55da0314281d9714cecf53fc018e 465 Pfam PF13180 PDZ domain 286 357 8.7E-9 T 14-10-2018 IPR001478 PDZ domain GO:0005515 PhaeoP54_03001 07de55da0314281d9714cecf53fc018e 465 Gene3D G3DSA:2.30.42.60 367 465 1.9E-10 T 14-10-2018 PhaeoP54_03001 07de55da0314281d9714cecf53fc018e 465 Pfam PF13365 Trypsin-like peptidase domain 91 227 3.5E-33 T 14-10-2018 PhaeoP54_03001 07de55da0314281d9714cecf53fc018e 465 SUPERFAMILY SSF50494 38 256 6.75E-59 T 14-10-2018 IPR009003 Peptidase S1, PA clan PhaeoP54_03001 07de55da0314281d9714cecf53fc018e 465 PRINTS PR00834 HtrA/DegQ protease family signature 198 215 8.8E-43 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 PhaeoP54_03001 07de55da0314281d9714cecf53fc018e 465 PRINTS PR00834 HtrA/DegQ protease family signature 121 141 8.8E-43 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 PhaeoP54_03001 07de55da0314281d9714cecf53fc018e 465 PRINTS PR00834 HtrA/DegQ protease family signature 100 112 8.8E-43 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 PhaeoP54_03001 07de55da0314281d9714cecf53fc018e 465 PRINTS PR00834 HtrA/DegQ protease family signature 162 186 8.8E-43 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 PhaeoP54_03001 07de55da0314281d9714cecf53fc018e 465 PRINTS PR00834 HtrA/DegQ protease family signature 307 319 8.8E-43 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 PhaeoP54_03001 07de55da0314281d9714cecf53fc018e 465 PRINTS PR00834 HtrA/DegQ protease family signature 220 237 8.8E-43 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 PhaeoP54_03001 07de55da0314281d9714cecf53fc018e 465 Gene3D G3DSA:2.40.10.120 37 258 6.1E-70 T 14-10-2018 PhaeoP54_03001 07de55da0314281d9714cecf53fc018e 465 SUPERFAMILY SSF50156 379 459 1.17E-9 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 PhaeoP54_03001 07de55da0314281d9714cecf53fc018e 465 SMART SM00228 269 349 0.064 T 14-10-2018 IPR001478 PDZ domain GO:0005515 PhaeoP54_03001 07de55da0314281d9714cecf53fc018e 465 SMART SM00228 390 456 0.39 T 14-10-2018 IPR001478 PDZ domain GO:0005515 PhaeoP54_03001 07de55da0314281d9714cecf53fc018e 465 SUPERFAMILY SSF50156 226 357 3.12E-15 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 PhaeoP54_02939 c316b99188512b509f3f1fbc1dc90fc2 224 Pfam PF01965 DJ-1/PfpI family 25 222 1.2E-15 T 14-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 PhaeoP54_02939 c316b99188512b509f3f1fbc1dc90fc2 224 SUPERFAMILY SSF52317 1 224 3.28E-77 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like PhaeoP54_02939 c316b99188512b509f3f1fbc1dc90fc2 224 Gene3D G3DSA:3.40.50.880 1 224 2.0E-82 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like PhaeoP54_03972 ed1433dcb3b7643d8af947949a503128 301 Pfam PF01062 Bestrophin, RFP-TM, chloride channel 2 277 2.6E-52 T 14-10-2018 IPR021134 Bestrophin/UPF0187 Reactome: R-HSA-2672351 PhaeoP54_01791 89a20e793b96e338cf2eee7c90db334e 395 Pfam PF14279 HNH endonuclease 3 60 3.1E-12 T 14-10-2018 IPR029471 HNH endonuclease 5 PhaeoP54_03440 9de1fadc2db7417addb3dfd29777ce76 237 Pfam PF01138 3' exoribonuclease family, domain 1 10 139 1.8E-21 T 14-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 PhaeoP54_03440 9de1fadc2db7417addb3dfd29777ce76 237 Gene3D G3DSA:3.30.230.70 10 237 7.4E-59 T 14-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 PhaeoP54_03440 9de1fadc2db7417addb3dfd29777ce76 237 SUPERFAMILY SSF55666 154 235 1.83E-23 T 14-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 PhaeoP54_03440 9de1fadc2db7417addb3dfd29777ce76 237 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 2 235 6.7E-109 T 14-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 PhaeoP54_03440 9de1fadc2db7417addb3dfd29777ce76 237 ProSitePatterns PS01277 Ribonuclease PH signature. 116 128 - T 14-10-2018 IPR018336 Ribonuclease PH, conserved site PhaeoP54_03440 9de1fadc2db7417addb3dfd29777ce76 237 Pfam PF03725 3' exoribonuclease family, domain 2 157 224 3.3E-10 T 14-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 PhaeoP54_03440 9de1fadc2db7417addb3dfd29777ce76 237 Hamap MF_00564 Ribonuclease PH [rph]. 11 237 42.838 T 14-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 PhaeoP54_03440 9de1fadc2db7417addb3dfd29777ce76 237 SUPERFAMILY SSF54211 1 181 5.06E-45 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold PhaeoP54_02876 c1a30c4271b7c419e5dfa8ffc19a2e1c 354 Gene3D G3DSA:3.60.10.10 24 354 6.7E-21 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily PhaeoP54_02876 c1a30c4271b7c419e5dfa8ffc19a2e1c 354 SUPERFAMILY SSF56219 26 352 1.43E-21 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily PhaeoP54_02876 c1a30c4271b7c419e5dfa8ffc19a2e1c 354 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 54 330 2.8E-20 T 14-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase PhaeoP54_02537 586064e8a2909973c9d6007716211561 238 Pfam PF00005 ABC transporter 32 178 6.8E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PhaeoP54_02537 586064e8a2909973c9d6007716211561 238 SUPERFAMILY SSF52540 13 231 1.19E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_02537 586064e8a2909973c9d6007716211561 238 SMART SM00382 41 227 9.7E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_02537 586064e8a2909973c9d6007716211561 238 ProSitePatterns PS00211 ABC transporters family signature. 151 165 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PhaeoP54_02537 586064e8a2909973c9d6007716211561 238 Gene3D G3DSA:3.40.50.300 10 237 8.4E-69 T 14-10-2018 PhaeoP54_03261 2bb9484905db33bc343075dc8b3494a8 213 Gene3D G3DSA:2.30.130.40 3 115 3.7E-28 T 14-10-2018 PhaeoP54_03261 2bb9484905db33bc343075dc8b3494a8 213 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 10 199 9.6E-23 T 14-10-2018 IPR003111 Lon, substrate-binding domain PhaeoP54_03261 2bb9484905db33bc343075dc8b3494a8 213 SMART SM00464 10 204 4.7E-11 T 14-10-2018 IPR003111 Lon, substrate-binding domain PhaeoP54_03261 2bb9484905db33bc343075dc8b3494a8 213 SUPERFAMILY SSF88697 10 200 7.46E-48 T 14-10-2018 IPR015947 PUA-like superfamily PhaeoP54_02812 6b0d14b034a510d01c7158efeccb5575 155 Pfam PF14347 Domain of unknown function (DUF4399) 57 155 7.6E-37 T 14-10-2018 IPR025512 Domain of unknown function DUF4399 PhaeoP54_03263 83dd7beb6d89e8329c58b0b97f1a8aab 408 Gene3D G3DSA:3.50.50.60 6 342 1.2E-99 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PhaeoP54_03263 83dd7beb6d89e8329c58b0b97f1a8aab 408 Gene3D G3DSA:3.30.9.50 79 273 1.2E-99 T 14-10-2018 PhaeoP54_03263 83dd7beb6d89e8329c58b0b97f1a8aab 408 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 6 394 8.6E-125 T 14-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 PhaeoP54_03263 83dd7beb6d89e8329c58b0b97f1a8aab 408 Pfam PF01494 FAD binding domain 6 342 1.5E-29 T 14-10-2018 IPR002938 FAD-binding domain GO:0071949 PhaeoP54_03263 83dd7beb6d89e8329c58b0b97f1a8aab 408 SUPERFAMILY SSF51905 6 388 3.36E-59 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PhaeoP54_03263 83dd7beb6d89e8329c58b0b97f1a8aab 408 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 160 175 5.9E-18 T 14-10-2018 PhaeoP54_03263 83dd7beb6d89e8329c58b0b97f1a8aab 408 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 284 299 5.9E-18 T 14-10-2018 PhaeoP54_03263 83dd7beb6d89e8329c58b0b97f1a8aab 408 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 6 28 5.9E-18 T 14-10-2018 PhaeoP54_03263 83dd7beb6d89e8329c58b0b97f1a8aab 408 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 299 315 5.9E-18 T 14-10-2018 PhaeoP54_03263 83dd7beb6d89e8329c58b0b97f1a8aab 408 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 298 311 - T 14-10-2018 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 Reactome: R-HSA-2142789 PhaeoP54_00982 10342c4e1b02f9b623023c1e905350b9 566 Gene3D G3DSA:3.10.105.10 286 534 3.3E-45 T 14-10-2018 PhaeoP54_00982 10342c4e1b02f9b623023c1e905350b9 566 Gene3D G3DSA:3.40.190.10 11 271 3.1E-49 T 14-10-2018 PhaeoP54_00982 10342c4e1b02f9b623023c1e905350b9 566 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 71 469 3.6E-67 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain PhaeoP54_00982 10342c4e1b02f9b623023c1e905350b9 566 SUPERFAMILY SSF53850 25 562 1.16E-104 T 14-10-2018 PhaeoP54_00982 10342c4e1b02f9b623023c1e905350b9 566 PIRSF PIRSF002741 1 293 2.1E-40 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 PhaeoP54_00982 10342c4e1b02f9b623023c1e905350b9 566 PIRSF PIRSF002741 304 564 1.5E-19 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 PhaeoP54_01234 6932b746caf82d41cdf46425154092e0 158 SUPERFAMILY SSF55298 39 157 2.98E-32 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 PhaeoP54_01234 6932b746caf82d41cdf46425154092e0 158 Pfam PF01042 Endoribonuclease L-PSP 51 155 2.4E-19 T 14-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 PhaeoP54_01234 6932b746caf82d41cdf46425154092e0 158 Gene3D G3DSA:3.30.1330.40 41 155 6.2E-32 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 PhaeoP54_00486 8e952c68784175b1123ece544f748b42 383 Pfam PF05569 BlaR1 peptidase M56 16 272 7.1E-18 T 14-10-2018 IPR008756 Peptidase M56 PhaeoP54_00997 34d6f80a94ac2fce4a7e4e8f50c81eb6 354 Gene3D G3DSA:2.60.120.260 2 148 1.2E-7 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily PhaeoP54_00997 34d6f80a94ac2fce4a7e4e8f50c81eb6 354 Pfam PF13403 Hint domain 149 293 2.2E-46 T 14-10-2018 IPR028992 Hedgehog/Intein (Hint) domain PhaeoP54_00997 34d6f80a94ac2fce4a7e4e8f50c81eb6 354 SUPERFAMILY SSF51294 150 290 2.88E-10 T 14-10-2018 IPR036844 Hint domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 PhaeoP54_00576 75b4be99885ec5011e9effaebe160fbc 444 SUPERFAMILY SSF52540 67 356 4.31E-21 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_02120 0790853d92faec381abd3ee33e467c95 395 SUPERFAMILY SSF117892 123 233 6.02E-9 T 14-10-2018 IPR036013 Band 7/SPFH domain superfamily PhaeoP54_02120 0790853d92faec381abd3ee33e467c95 395 Pfam PF13421 SPFH domain-Band 7 family 26 236 1.2E-96 T 14-10-2018 IPR033880 SPFH domain, YdjI-like PhaeoP54_02120 0790853d92faec381abd3ee33e467c95 395 Pfam PF14237 Domain of unknown function (DUF4339) 328 371 2.2E-14 T 14-10-2018 IPR025640 Domain of unknown function DUF4339 Reactome: R-HSA-6798695 PhaeoP54_00704 80bb5defad0de5b5b9d576ed2be15d44 282 SUPERFAMILY SSF161098 11 282 7.66E-62 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_00704 80bb5defad0de5b5b9d576ed2be15d44 282 Gene3D G3DSA:1.10.3720.10 5 274 1.1E-53 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_00704 80bb5defad0de5b5b9d576ed2be15d44 282 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 98 266 8.3E-17 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PhaeoP54_03185 9cfe9312239dbce2466f9415d8aa60ed 449 SUPERFAMILY SSF100879 305 411 8.04E-26 T 14-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 PhaeoP54_03185 9cfe9312239dbce2466f9415d8aa60ed 449 Gene3D G3DSA:3.30.70.270 69 228 4.6E-52 T 14-10-2018 PhaeoP54_03185 9cfe9312239dbce2466f9415d8aa60ed 449 Gene3D G3DSA:1.10.150.20 231 300 1.4E-16 T 14-10-2018 PhaeoP54_03185 9cfe9312239dbce2466f9415d8aa60ed 449 Gene3D G3DSA:3.30.1490.100 305 410 5.4E-24 T 14-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 PhaeoP54_03185 9cfe9312239dbce2466f9415d8aa60ed 449 SUPERFAMILY SSF56672 68 298 5.78E-80 T 14-10-2018 PhaeoP54_03185 9cfe9312239dbce2466f9415d8aa60ed 449 Pfam PF11799 impB/mucB/samB family C-terminal domain 302 408 2.0E-16 T 14-10-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 PhaeoP54_03185 9cfe9312239dbce2466f9415d8aa60ed 449 Gene3D G3DSA:2.30.40.20 86 136 4.6E-52 T 14-10-2018 PhaeoP54_03185 9cfe9312239dbce2466f9415d8aa60ed 449 Pfam PF00817 impB/mucB/samB family 73 218 2.8E-47 T 14-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 PhaeoP54_03185 9cfe9312239dbce2466f9415d8aa60ed 449 Hamap MF_01113 DNA polymerase IV [dinB]. 66 411 33.91 T 14-10-2018 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 PhaeoP54_03961 40041d4d9e29b2c567b3f51500d78eeb 472 Pfam PF03109 ABC1 family 144 255 7.5E-30 T 14-10-2018 IPR004147 UbiB domain PhaeoP54_03961 40041d4d9e29b2c567b3f51500d78eeb 472 SUPERFAMILY SSF56112 129 335 6.53E-17 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily PhaeoP54_02556 608a9f6314fef0dcc1b2dc816d380a9a 308 Gene3D G3DSA:3.40.50.720 35 308 1.0E-90 T 14-10-2018 PhaeoP54_02556 608a9f6314fef0dcc1b2dc816d380a9a 308 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 212 228 - T 14-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site PhaeoP54_02556 608a9f6314fef0dcc1b2dc816d380a9a 308 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 120 273 6.1E-40 T 14-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 PhaeoP54_02556 608a9f6314fef0dcc1b2dc816d380a9a 308 SUPERFAMILY SSF51735 96 274 1.32E-42 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PhaeoP54_02556 608a9f6314fef0dcc1b2dc816d380a9a 308 Gene3D G3DSA:3.40.50.720 94 274 1.0E-90 T 14-10-2018 PhaeoP54_03528 13b3400ec77d2ac0912700aac846aa4f 567 Gene3D G3DSA:3.30.750.140 419 533 8.2E-10 T 14-10-2018 IPR038610 FliK-like, C-terminal domain superfamily PhaeoP54_03528 13b3400ec77d2ac0912700aac846aa4f 567 Pfam PF02120 Flagellar hook-length control protein FliK 447 522 9.4E-14 T 14-10-2018 IPR021136 Flagellar hook-length control protein-like, C-terminal PhaeoP54_01504 a04ab73084c4080901144763d949c8f3 170 SUPERFAMILY SSF54637 36 162 4.44E-22 T 14-10-2018 IPR029069 HotDog domain superfamily PhaeoP54_01504 a04ab73084c4080901144763d949c8f3 170 Pfam PF13279 Thioesterase-like superfamily 43 159 1.5E-7 T 14-10-2018 PhaeoP54_01504 a04ab73084c4080901144763d949c8f3 170 Gene3D G3DSA:3.10.129.10 20 164 4.8E-25 T 14-10-2018 PhaeoP54_02286 45df5ce9c2deb51894249ddaa45f096e 217 Gene3D G3DSA:3.40.50.150 2 200 1.1E-43 T 14-10-2018 PhaeoP54_02286 45df5ce9c2deb51894249ddaa45f096e 217 SUPERFAMILY SSF53335 1 176 4.14E-37 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PhaeoP54_02286 45df5ce9c2deb51894249ddaa45f096e 217 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 19 171 8.2E-32 T 14-10-2018 PhaeoP54_03101 9795bad5e1c26cf6392b4f4516eef589 150 Pfam PF11911 Protein of unknown function (DUF3429) 4 147 1.7E-32 T 14-10-2018 IPR021836 Protein of unknown function DUF3429 PhaeoP54_00493 f0c613e37a245c9c3469922f7e8b20a4 577 Pfam PF01547 Bacterial extracellular solute-binding protein 79 424 3.8E-14 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein PhaeoP54_00493 f0c613e37a245c9c3469922f7e8b20a4 577 Gene3D G3DSA:3.40.190.10 183 507 7.2E-39 T 14-10-2018 PhaeoP54_00493 f0c613e37a245c9c3469922f7e8b20a4 577 PIRSF PIRSF035859 1 577 1.7E-257 T 14-10-2018 IPR014597 ABC transporter, periplasmic substrate-binding protein, predicted GO:0005215 PhaeoP54_00493 f0c613e37a245c9c3469922f7e8b20a4 577 Gene3D G3DSA:3.40.190.10 81 464 7.2E-39 T 14-10-2018 PhaeoP54_00493 f0c613e37a245c9c3469922f7e8b20a4 577 SUPERFAMILY SSF53850 62 513 1.09E-55 T 14-10-2018 PhaeoP54_03947 ed801f07c3e1aa04a22020b98e3ae37e 409 Gene3D G3DSA:3.40.190.10 141 391 5.3E-114 T 14-10-2018 PhaeoP54_03947 ed801f07c3e1aa04a22020b98e3ae37e 409 Gene3D G3DSA:3.40.190.10 24 368 5.3E-114 T 14-10-2018 PhaeoP54_03947 ed801f07c3e1aa04a22020b98e3ae37e 409 Pfam PF01547 Bacterial extracellular solute-binding protein 69 266 2.3E-19 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein PhaeoP54_03947 ed801f07c3e1aa04a22020b98e3ae37e 409 SUPERFAMILY SSF53850 21 405 3.33E-39 T 14-10-2018 PhaeoP54_03274 1a9e61210ddc26ed2b9bccd5c58169fe 313 Gene3D G3DSA:2.40.160.10 22 313 1.3E-60 T 14-10-2018 IPR023614 Porin domain superfamily PhaeoP54_03274 1a9e61210ddc26ed2b9bccd5c58169fe 313 Pfam PF13609 Gram-negative porin 7 298 2.3E-36 T 14-10-2018 PhaeoP54_03274 1a9e61210ddc26ed2b9bccd5c58169fe 313 SUPERFAMILY SSF56935 22 313 1.52E-22 T 14-10-2018 PhaeoP54_02245 ef898a6f8029e7e07f6e78bb35efb9b0 103 SUPERFAMILY SSF54909 2 101 8.29E-20 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel PhaeoP54_02245 ef898a6f8029e7e07f6e78bb35efb9b0 103 Pfam PF07876 Stress responsive A/B Barrel Domain 2 100 6.4E-16 T 14-10-2018 IPR013097 Stress responsive alpha-beta barrel PhaeoP54_02245 ef898a6f8029e7e07f6e78bb35efb9b0 103 SMART SM00886 2 102 5.5E-22 T 14-10-2018 IPR013097 Stress responsive alpha-beta barrel PhaeoP54_02245 ef898a6f8029e7e07f6e78bb35efb9b0 103 Gene3D G3DSA:3.30.70.100 1 102 6.3E-22 T 14-10-2018 PhaeoP54_01977 4bfe23c74766171fa96df969fcb57a19 333 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 33 283 9.5E-76 T 14-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 PhaeoP54_01977 4bfe23c74766171fa96df969fcb57a19 333 Gene3D G3DSA:3.40.190.170 27 330 1.8E-87 T 14-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily PhaeoP54_01977 4bfe23c74766171fa96df969fcb57a19 333 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 33 315 2.2E-98 T 14-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 PhaeoP54_01977 4bfe23c74766171fa96df969fcb57a19 333 PIRSF PIRSF006470 1 331 1.9E-118 T 14-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 PhaeoP54_01331 bf18c9455d8bc67f314fa74782a2cb34 88 Pfam PF13467 Ribbon-helix-helix domain 21 84 1.1E-23 T 14-10-2018 IPR027373 Ribbon-helix-helix domain PhaeoP54_01331 bf18c9455d8bc67f314fa74782a2cb34 88 Gene3D G3DSA:1.10.3990.20 16 88 1.9E-13 T 14-10-2018 IPR038268 Ribbon-helix-helix domain superfamily PhaeoP54_00563 799de886a753230f5ab532bb9648e303 379 Gene3D G3DSA:3.30.1150.10 252 378 8.1E-11 T 14-10-2018 PhaeoP54_00194 05c8d346d95447ef69121aafbc43214f 201 SMART SM00903 18 173 5.7E-17 T 14-10-2018 IPR002563 Flavin reductase like domain GO:0010181 PhaeoP54_00194 05c8d346d95447ef69121aafbc43214f 201 Pfam PF01613 Flavin reductase like domain 21 164 1.2E-18 T 14-10-2018 IPR002563 Flavin reductase like domain GO:0010181 PhaeoP54_00194 05c8d346d95447ef69121aafbc43214f 201 Gene3D G3DSA:2.30.110.10 11 201 4.3E-62 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 PhaeoP54_00194 05c8d346d95447ef69121aafbc43214f 201 SUPERFAMILY SSF50475 2 196 8.83E-50 T 14-10-2018 PhaeoP54_00743 0c4413eaa1ba50dabc705476466631fa 381 Gene3D G3DSA:3.40.190.170 61 365 2.4E-57 T 14-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily PhaeoP54_00743 0c4413eaa1ba50dabc705476466631fa 381 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 81 341 6.5E-44 T 14-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 PhaeoP54_02320 cb250e5b01b45fbff02a4a005d5c7884 465 Pfam PF00912 Transglycosylase 258 388 9.5E-34 T 14-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 PhaeoP54_02320 cb250e5b01b45fbff02a4a005d5c7884 465 Gene3D G3DSA:1.10.3810.10 243 426 1.9E-35 T 14-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 PhaeoP54_02320 cb250e5b01b45fbff02a4a005d5c7884 465 SUPERFAMILY SSF53955 259 426 3.94E-34 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily PhaeoP54_01061 901a71d927f5d84506f156b4550ba40a 266 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 16 264 2.7E-64 T 14-10-2018 IPR003453 ABC transport permease subunit MlaE, Proteobacteria PhaeoP54_01061 901a71d927f5d84506f156b4550ba40a 266 Pfam PF02405 Permease MlaE 53 260 2.4E-68 T 14-10-2018 IPR030802 ABC transporter permease MalE GO:0043190 PhaeoP54_00705 8105662bdc04508b2438895a30a28f12 315 SUPERFAMILY SSF161098 75 299 1.44E-54 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_00705 8105662bdc04508b2438895a30a28f12 315 SUPERFAMILY SSF160964 31 62 8.11E-5 T 14-10-2018 PhaeoP54_00705 8105662bdc04508b2438895a30a28f12 315 Gene3D G3DSA:1.10.3720.10 70 309 2.0E-64 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_00705 8105662bdc04508b2438895a30a28f12 315 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 103 304 1.9E-16 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PhaeoP54_00105 e4dda1fad20b65ccfdd29b0ee4546802 321 SUPERFAMILY SSF103481 216 307 1.7E-15 T 14-10-2018 PhaeoP54_00105 e4dda1fad20b65ccfdd29b0ee4546802 321 Pfam PF00892 EamA-like transporter family 11 144 2.3E-17 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 PhaeoP54_00105 e4dda1fad20b65ccfdd29b0ee4546802 321 Pfam PF00892 EamA-like transporter family 154 300 4.9E-7 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 PhaeoP54_00105 e4dda1fad20b65ccfdd29b0ee4546802 321 SUPERFAMILY SSF103481 46 148 6.41E-14 T 14-10-2018 PhaeoP54_01635 07995aeeb04c6c671a1ace0f7fc3b845 247 SUPERFAMILY SSF53448 2 217 1.63E-26 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PhaeoP54_01635 07995aeeb04c6c671a1ace0f7fc3b845 247 Gene3D G3DSA:3.90.550.10 1 212 1.4E-24 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PhaeoP54_01635 07995aeeb04c6c671a1ace0f7fc3b845 247 Pfam PF00535 Glycosyl transferase family 2 7 136 2.3E-11 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 PhaeoP54_02696 ea0bf63e0d400ac94a2e5bbbc1b284ff 308 SUPERFAMILY SSF161098 54 290 1.7E-49 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_02696 ea0bf63e0d400ac94a2e5bbbc1b284ff 308 Gene3D G3DSA:1.10.3720.10 50 304 6.8E-56 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_02696 ea0bf63e0d400ac94a2e5bbbc1b284ff 308 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 89 303 1.2E-13 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PhaeoP54_02312 c76d8d42a15c721e575b3056f8288071 265 Pfam PF07179 SseB protein N-terminal domain 13 124 1.0E-7 T 14-10-2018 IPR009839 SseB protein N-terminal domain PhaeoP54_00089 2685a80a395ab389b581e4228f884508 85 Pfam PF11391 Protein of unknown function (DUF2798) 13 71 2.6E-18 T 14-10-2018 IPR021529 Protein of unknown function DUF2798 PhaeoP54_04053 3177fa1940bfe1ff3329e6310c86f47d 329 Gene3D G3DSA:3.90.25.10 174 318 7.3E-104 T 14-10-2018 PhaeoP54_04053 3177fa1940bfe1ff3329e6310c86f47d 329 SUPERFAMILY SSF51735 6 321 7.1E-70 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PhaeoP54_04053 3177fa1940bfe1ff3329e6310c86f47d 329 Pfam PF01370 NAD dependent epimerase/dehydratase family 8 233 2.3E-72 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 PhaeoP54_04053 3177fa1940bfe1ff3329e6310c86f47d 329 Hamap MF_00956 GDP-L-fucose synthase [fcl]. 5 320 47.847 T 14-10-2018 IPR028614 GDP-L-fucose synthase/GDP-L-colitose synthase GO:0009226|GO:0016491 KEGG: 00051+1.1.1.271|KEGG: 00520+1.1.1.271|MetaCyc: PWY-66|Reactome: R-HSA-6787639 PhaeoP54_04053 3177fa1940bfe1ff3329e6310c86f47d 329 Gene3D G3DSA:3.40.50.720 8 309 7.3E-104 T 14-10-2018 PhaeoP54_00452 9afbf11d1b691e262eaf139587e9701c 236 Pfam PF00574 Clp protease 92 150 1.0E-4 T 14-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA PhaeoP54_00452 9afbf11d1b691e262eaf139587e9701c 236 SUPERFAMILY SSF52096 69 154 6.36E-14 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily PhaeoP54_00452 9afbf11d1b691e262eaf139587e9701c 236 Gene3D G3DSA:3.90.226.10 57 200 3.7E-12 T 14-10-2018 PhaeoP54_03196 d8229f054f6481c37bbaa99e8e031296 358 Pfam PF02653 Branched-chain amino acid transport system / permease component 51 333 2.6E-30 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 PhaeoP54_02648 05e9f7e0e45d7bed972f3369eb14ba0a 231 SUPERFAMILY SSF89562 9 183 1.1E-18 T 14-10-2018 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily PhaeoP54_02648 05e9f7e0e45d7bed972f3369eb14ba0a 231 Pfam PF03737 Aldolase/RraA 14 182 1.4E-14 T 14-10-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein PhaeoP54_02648 05e9f7e0e45d7bed972f3369eb14ba0a 231 Gene3D G3DSA:3.50.30.40 2 184 5.0E-25 T 14-10-2018 PhaeoP54_03298 7a6f4f7b436f2ea1ab5666ae4d55125f 233 SUPERFAMILY SSF46894 121 224 1.39E-5 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PhaeoP54_03298 7a6f4f7b436f2ea1ab5666ae4d55125f 233 Gene3D G3DSA:1.10.10.10 116 228 1.3E-8 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_03194 7bdd5f997931dfccc73126e27eb24c63 278 Pfam PF00005 ABC transporter 32 183 1.0E-23 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PhaeoP54_03194 7bdd5f997931dfccc73126e27eb24c63 278 Gene3D G3DSA:3.40.50.300 10 257 8.0E-54 T 14-10-2018 PhaeoP54_03194 7bdd5f997931dfccc73126e27eb24c63 278 SUPERFAMILY SSF52540 14 255 2.66E-51 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_03194 7bdd5f997931dfccc73126e27eb24c63 278 SMART SM00382 41 257 2.8E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_01112 05ef5e78df3fab9de635b28f7a35268b 390 Gene3D G3DSA:3.30.420.40 160 346 1.8E-96 T 14-10-2018 PhaeoP54_01112 05ef5e78df3fab9de635b28f7a35268b 390 SUPERFAMILY SSF53067 23 339 2.07E-12 T 14-10-2018 PhaeoP54_01112 05ef5e78df3fab9de635b28f7a35268b 390 Hamap MF_01270 Anhydro-N-acetylmuramic acid kinase [anmK]. 19 386 32.857 T 14-10-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 MetaCyc: PWY-7883 PhaeoP54_01112 05ef5e78df3fab9de635b28f7a35268b 390 Pfam PF03702 Anhydro-N-acetylmuramic acid kinase 21 378 1.0E-70 T 14-10-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 MetaCyc: PWY-7883 PhaeoP54_01112 05ef5e78df3fab9de635b28f7a35268b 390 Gene3D G3DSA:3.30.420.40 22 375 1.8E-96 T 14-10-2018 PhaeoP54_03698 eac38b5a2fee249393d9af442eeeb6d1 276 Pfam PF14355 Abortive infection C-terminus 192 271 2.8E-16 T 14-10-2018 IPR026001 Abortive infection protein-like, C-terminal domain PhaeoP54_02214 648b7059bd2abb1913db9684be7f18a5 267 Gene3D G3DSA:3.90.226.10 2 208 1.3E-61 T 14-10-2018 PhaeoP54_02214 648b7059bd2abb1913db9684be7f18a5 267 SUPERFAMILY SSF52096 4 266 5.29E-75 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily PhaeoP54_02214 648b7059bd2abb1913db9684be7f18a5 267 Pfam PF00378 Enoyl-CoA hydratase/isomerase 13 266 1.3E-45 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 PhaeoP54_02214 648b7059bd2abb1913db9684be7f18a5 267 Gene3D G3DSA:1.10.12.10 209 267 7.5E-17 T 14-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal PhaeoP54_02214 648b7059bd2abb1913db9684be7f18a5 267 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 107 127 - T 14-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 PhaeoP54_00709 b889a1834cbfdb9ed84bf3cded68857d 198 Gene3D G3DSA:3.40.50.720 2 197 7.1E-47 T 14-10-2018 PhaeoP54_00709 b889a1834cbfdb9ed84bf3cded68857d 198 Pfam PF13460 NAD(P)H-binding 7 186 1.3E-38 T 14-10-2018 IPR016040 NAD(P)-binding domain PhaeoP54_00709 b889a1834cbfdb9ed84bf3cded68857d 198 SUPERFAMILY SSF51735 1 191 1.23E-37 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PhaeoP54_03559 0d6764fc45bc185e80bda7d79ce51adc 104 SUPERFAMILY SSF54909 1 104 2.57E-10 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel PhaeoP54_03559 0d6764fc45bc185e80bda7d79ce51adc 104 Pfam PF03795 YCII-related domain 59 104 1.7E-4 T 14-10-2018 IPR005545 YCII-related PhaeoP54_03252 179f89a3a11791cc8b93acb6f8c483f3 209 Pfam PF01810 LysE type translocator 16 198 1.1E-22 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 PhaeoP54_01702 ea791a265db9204d21bdd79183917720 132 SUPERFAMILY SSF102829 4 86 4.71E-18 T 14-10-2018 IPR036192 Cell division protein ZapA-like superfamily PhaeoP54_01702 ea791a265db9204d21bdd79183917720 132 Gene3D G3DSA:1.10.20.30 1 42 2.1E-6 T 14-10-2018 PhaeoP54_01702 ea791a265db9204d21bdd79183917720 132 Pfam PF05164 Cell division protein ZapA 4 86 1.7E-20 T 14-10-2018 IPR007838 Cell division protein ZapA-like PhaeoP54_02376 e5b8f6920887e3798bc34a20185d1e07 373 Pfam PF13391 HNH endonuclease 270 320 4.0E-8 T 14-10-2018 IPR003615 HNH nuclease PhaeoP54_03097 0ac9d4457c7ae7950ccb0efbabf52a44 189 Gene3D G3DSA:3.30.70.560 5 189 3.2E-47 T 14-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 PhaeoP54_03097 0ac9d4457c7ae7950ccb0efbabf52a44 189 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 10 160 5.6E-28 T 14-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 PhaeoP54_03097 0ac9d4457c7ae7950ccb0efbabf52a44 189 SUPERFAMILY SSF55083 8 182 1.7E-42 T 14-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 PhaeoP54_03097 0ac9d4457c7ae7950ccb0efbabf52a44 189 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 9 160 3.2E-28 T 14-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 PhaeoP54_01632 a41819a0056326ab729f652ec67b4016 194 SUPERFAMILY SSF56925 47 194 1.99E-20 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel PhaeoP54_01632 a41819a0056326ab729f652ec67b4016 194 Pfam PF13505 Outer membrane protein beta-barrel domain 9 194 1.2E-14 T 14-10-2018 IPR027385 Outer membrane protein beta-barrel PhaeoP54_01632 a41819a0056326ab729f652ec67b4016 194 Gene3D G3DSA:2.40.160.20 46 194 4.9E-14 T 14-10-2018 PhaeoP54_00779 9d8fb1e69cf2a36824667ec498e16462 231 Pfam PF02571 Precorrin-6x reductase CbiJ/CobK 1 226 6.7E-62 T 14-10-2018 IPR003723 Precorrin-6x reductase GO:0009236|GO:0016994|GO:0055114 PhaeoP54_00506 d4d69dcf8cb20d3b14d7bc3059b1f574 356 Pfam PF13641 Glycosyltransferase like family 2 24 262 7.3E-13 T 14-10-2018 PhaeoP54_00506 d4d69dcf8cb20d3b14d7bc3059b1f574 356 SUPERFAMILY SSF53448 27 287 6.47E-44 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PhaeoP54_00506 d4d69dcf8cb20d3b14d7bc3059b1f574 356 Gene3D G3DSA:3.90.550.10 19 269 7.1E-38 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PhaeoP54_01103 b4403266450895c678d424b73b554d21 181 Pfam PF02620 Uncharacterized ACR, COG1399 62 171 2.4E-11 T 14-10-2018 IPR003772 Large ribosomal RNA subunit accumulation protein YceD PhaeoP54_03553 835b060891bfd3c92a87d21652d9b46c 384 Gene3D G3DSA:3.90.1150.10 266 375 5.4E-17 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 PhaeoP54_03553 835b060891bfd3c92a87d21652d9b46c 384 PIRSF PIRSF000525 7 376 7.6E-53 T 14-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 PhaeoP54_03553 835b060891bfd3c92a87d21652d9b46c 384 Gene3D G3DSA:3.40.640.10 29 263 4.3E-40 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PhaeoP54_03553 835b060891bfd3c92a87d21652d9b46c 384 TIGRFAM TIGR01365 serC_2: phosphoserine aminotransferase 9 375 1.6E-187 T 14-10-2018 IPR006271 Phosphoserine aminotransferase, Methanosarcina-type GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52 PhaeoP54_03553 835b060891bfd3c92a87d21652d9b46c 384 SUPERFAMILY SSF53383 12 374 1.27E-76 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PhaeoP54_02992 2420e4645c7e32f82a20e617b3c7a3e4 263 ProSitePatterns PS00211 ABC transporters family signature. 158 172 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PhaeoP54_02992 2420e4645c7e32f82a20e617b3c7a3e4 263 SMART SM00382 47 234 2.3E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_02992 2420e4645c7e32f82a20e617b3c7a3e4 263 Pfam PF00005 ABC transporter 38 186 2.6E-38 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PhaeoP54_02992 2420e4645c7e32f82a20e617b3c7a3e4 263 SUPERFAMILY SSF52540 23 256 5.19E-81 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_02992 2420e4645c7e32f82a20e617b3c7a3e4 263 PIRSF PIRSF039085 19 262 1.2E-109 T 14-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 PhaeoP54_02992 2420e4645c7e32f82a20e617b3c7a3e4 263 Gene3D G3DSA:3.40.50.300 18 261 3.0E-79 T 14-10-2018 PhaeoP54_03736 da190c10904b99acc6bccfc41cb3338a 452 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 8 415 8.1E-77 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PhaeoP54_03736 da190c10904b99acc6bccfc41cb3338a 452 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 182 238 - T 14-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PhaeoP54_03736 da190c10904b99acc6bccfc41cb3338a 452 SUPERFAMILY SSF81442 3 433 1.28E-91 T 14-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PhaeoP54_03736 da190c10904b99acc6bccfc41cb3338a 452 Gene3D G3DSA:1.20.210.10 1 442 7.5E-127 T 14-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PhaeoP54_00724 0dae9c5711c6dd5108a228e97b48a8e9 406 SUPERFAMILY SSF55785 26 109 4.54E-16 T 14-10-2018 IPR035965 PAS domain superfamily PhaeoP54_00724 0dae9c5711c6dd5108a228e97b48a8e9 406 Pfam PF08447 PAS fold 41 107 8.9E-9 T 14-10-2018 IPR013655 PAS fold-3 GO:0005515 PhaeoP54_00724 0dae9c5711c6dd5108a228e97b48a8e9 406 Gene3D G3DSA:3.30.450.20 21 114 2.5E-11 T 14-10-2018 PhaeoP54_02206 84e141332e640db9094f6abb4894c9b4 308 Gene3D G3DSA:3.90.1200.10 99 308 1.5E-70 T 14-10-2018 PhaeoP54_02206 84e141332e640db9094f6abb4894c9b4 308 SUPERFAMILY SSF56112 15 289 1.46E-44 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily PhaeoP54_02206 84e141332e640db9094f6abb4894c9b4 308 Gene3D G3DSA:3.30.200.20 3 96 3.2E-22 T 14-10-2018 PhaeoP54_02206 84e141332e640db9094f6abb4894c9b4 308 Pfam PF01633 Choline/ethanolamine kinase 45 231 7.2E-20 T 14-10-2018 PhaeoP54_01432 51f2749399fc73b4e7e2f2cf67f9dea6 149 Pfam PF04134 Protein of unknown function, DUF393 25 132 5.8E-27 T 14-10-2018 IPR007263 Protein of unknown function DUF393 PhaeoP54_01497 0d6bd2e26fcefa906dccc08d7877c87a 382 Pfam PF02628 Cytochrome oxidase assembly protein 39 364 6.5E-99 T 14-10-2018 IPR003780 COX15/CtaA family GO:0006784|GO:0016021|GO:0016627|GO:0055114 Reactome: R-HSA-189451 PhaeoP54_01497 0d6bd2e26fcefa906dccc08d7877c87a 382 Hamap MF_01665 Heme A synthase [ctaA]. 34 374 25.352 T 14-10-2018 IPR023754 Heme A synthase, type 2 GO:0006784|GO:0016020|GO:0016627|GO:0055114 Reactome: R-HSA-189451 PhaeoP54_03245 79ce78f871714ecb39046cd17402661a 280 SUPERFAMILY SSF52266 29 216 1.69E-28 T 14-10-2018 PhaeoP54_03245 79ce78f871714ecb39046cd17402661a 280 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 35 203 2.5E-14 T 14-10-2018 IPR013830 SGNH hydrolase-type esterase domain PhaeoP54_03245 79ce78f871714ecb39046cd17402661a 280 Gene3D G3DSA:3.40.50.1110 20 220 4.8E-20 T 14-10-2018 IPR036514 SGNH hydrolase superfamily PhaeoP54_01293 8bc77db7e360956a9333ce1daaa6b39e 352 Gene3D G3DSA:3.40.190.170 25 335 1.5E-72 T 14-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily PhaeoP54_01293 8bc77db7e360956a9333ce1daaa6b39e 352 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 36 318 1.6E-50 T 14-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 PhaeoP54_04074 af6313644722ffc403c3e3ce650c7915 669 Pfam PF04230 Polysaccharide pyruvyl transferase 105 331 2.8E-17 T 14-10-2018 IPR007345 Polysaccharide pyruvyl transferase PhaeoP54_04074 af6313644722ffc403c3e3ce650c7915 669 SUPERFAMILY SSF53474 476 614 8.53E-5 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold PhaeoP54_02248 7788a99c05ae769b89a97ef4a9739249 320 Pfam PF00892 EamA-like transporter family 8 140 1.8E-11 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 PhaeoP54_02248 7788a99c05ae769b89a97ef4a9739249 320 Pfam PF00892 EamA-like transporter family 149 288 8.0E-12 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 PhaeoP54_02248 7788a99c05ae769b89a97ef4a9739249 320 SUPERFAMILY SSF103481 43 143 2.35E-11 T 14-10-2018 PhaeoP54_02248 7788a99c05ae769b89a97ef4a9739249 320 SUPERFAMILY SSF103481 212 292 3.92E-11 T 14-10-2018 PhaeoP54_00092 cbe3dc78846b3eb3ede2fb2a5f565f7c 60 Pfam PF10276 Zinc-finger domain 15 50 1.3E-17 T 14-10-2018 IPR019401 Zinc finger, CHCC-type Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PhaeoP54_00092 cbe3dc78846b3eb3ede2fb2a5f565f7c 60 Gene3D G3DSA:2.60.260.40 6 57 3.8E-22 T 14-10-2018 PhaeoP54_00497 29534474e66180e009e9c1d1084cc53e 357 SUPERFAMILY SSF52540 175 348 1.18E-17 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_00497 29534474e66180e009e9c1d1084cc53e 357 Gene3D G3DSA:3.40.50.300 129 357 6.2E-33 T 14-10-2018 PhaeoP54_01666 58e0bdff548591f54766d51f3cc3f427 204 Pfam PF01810 LysE type translocator 15 202 4.7E-33 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 PhaeoP54_02283 fb0e258a4ecac592d8bbe810d17b8dd2 486 TIGRFAM TIGR00313 cobQ: cobyric acid synthase CobQ 6 475 1.6E-124 T 14-10-2018 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 PhaeoP54_02283 fb0e258a4ecac592d8bbe810d17b8dd2 486 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 251 435 1.4E-56 T 14-10-2018 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 PhaeoP54_02283 fb0e258a4ecac592d8bbe810d17b8dd2 486 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 6 238 1.8E-19 T 14-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain PhaeoP54_02283 fb0e258a4ecac592d8bbe810d17b8dd2 486 Gene3D G3DSA:3.40.50.880 251 394 5.5E-15 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like PhaeoP54_02283 fb0e258a4ecac592d8bbe810d17b8dd2 486 SUPERFAMILY SSF52540 1 241 1.76E-53 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_02283 fb0e258a4ecac592d8bbe810d17b8dd2 486 Hamap MF_00028 Cobyric acid synthase [cobQ]. 1 483 186.639 T 14-10-2018 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 PhaeoP54_02283 fb0e258a4ecac592d8bbe810d17b8dd2 486 SUPERFAMILY SSF52317 251 440 9.83E-38 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like PhaeoP54_02283 fb0e258a4ecac592d8bbe810d17b8dd2 486 Gene3D G3DSA:3.40.50.300 2 243 1.0E-51 T 14-10-2018 PhaeoP54_02943 d18e56dd9f7ed1a2ae077fc3291b1c88 320 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 15 253 1.5E-42 T 14-10-2018 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 PhaeoP54_02943 d18e56dd9f7ed1a2ae077fc3291b1c88 320 Gene3D G3DSA:3.20.20.60 1 319 3.9E-105 T 14-10-2018 PhaeoP54_02943 d18e56dd9f7ed1a2ae077fc3291b1c88 320 SUPERFAMILY SSF51621 12 264 1.67E-62 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 PhaeoP54_02943 d18e56dd9f7ed1a2ae077fc3291b1c88 320 PIRSF PIRSF015582 4 320 2.3E-81 T 14-10-2018 IPR011206 Citrate lyase beta subunit-like PhaeoP54_03496 15c559f10500df3b07352f7a07d3500a 482 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 434 481 1.7E-8 T 14-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain PhaeoP54_03496 15c559f10500df3b07352f7a07d3500a 482 SUPERFAMILY SSF64518 163 481 7.06E-9 T 14-10-2018 PhaeoP54_03496 15c559f10500df3b07352f7a07d3500a 482 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 5 481 3.8E-67 T 14-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 PhaeoP54_03595 37ba78f552826b5f8da82b6f7faa73b1 421 SUPERFAMILY SSF53448 10 232 6.88E-52 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PhaeoP54_03595 37ba78f552826b5f8da82b6f7faa73b1 421 Gene3D G3DSA:3.90.550.10 2 266 2.5E-48 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PhaeoP54_03595 37ba78f552826b5f8da82b6f7faa73b1 421 Pfam PF00535 Glycosyl transferase family 2 12 158 1.5E-33 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 PhaeoP54_03521 f9158619141ad110ab1c8c126be23095 129 Pfam PF00460 Flagella basal body rod protein 20 37 1.6E-4 T 14-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 PhaeoP54_00679 f134442585739a012905a9c78478f560 249 Pfam PF02630 SCO1/SenC 95 225 5.8E-9 T 14-10-2018 IPR003782 Copper chaperone SCO1/SenC Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PhaeoP54_00679 f134442585739a012905a9c78478f560 249 Gene3D G3DSA:3.40.30.10 68 243 6.4E-30 T 14-10-2018 PhaeoP54_00679 f134442585739a012905a9c78478f560 249 SUPERFAMILY SSF52833 74 243 6.49E-22 T 14-10-2018 IPR036249 Thioredoxin-like superfamily PhaeoP54_00548 92d355f8327d5bc03fc275496e99b252 235 Gene3D G3DSA:3.30.450.40 45 234 1.1E-30 T 14-10-2018 IPR029016 GAF-like domain superfamily PhaeoP54_00548 92d355f8327d5bc03fc275496e99b252 235 Pfam PF04340 Protein of unknown function, DUF484 18 234 1.1E-17 T 14-10-2018 IPR007435 Protein of unknown function DUF484 PhaeoP54_01140 a676a2f6e7f4f32fd7d42e80832fd995 97 SUPERFAMILY SSF54909 1 95 3.08E-28 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel PhaeoP54_01140 a676a2f6e7f4f32fd7d42e80832fd995 97 Pfam PF07045 Domain of unknown function (DUF1330) 3 95 3.0E-32 T 14-10-2018 IPR010753 Domain of unknown function DUF1330 PhaeoP54_01140 a676a2f6e7f4f32fd7d42e80832fd995 97 Gene3D G3DSA:3.30.70.100 1 97 3.5E-31 T 14-10-2018 PhaeoP54_00533 d4be7b47f27e665feb570267980603aa 265 Gene3D G3DSA:3.20.20.70 32 239 9.2E-28 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PhaeoP54_00533 d4be7b47f27e665feb570267980603aa 265 PIRSF PIRSF000370 31 265 1.3E-62 T 14-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 PhaeoP54_00533 d4be7b47f27e665feb570267980603aa 265 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 33 262 35.166 T 14-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 PhaeoP54_00533 d4be7b47f27e665feb570267980603aa 265 TIGRFAM TIGR03365 Bsubt_queE: 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE 32 265 1.0E-110 T 14-10-2018 IPR017742 7-carboxy-7-deazaguanine synthase KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 PhaeoP54_00533 d4be7b47f27e665feb570267980603aa 265 Pfam PF13394 4Fe-4S single cluster domain 55 141 3.2E-7 T 14-10-2018 PhaeoP54_00533 d4be7b47f27e665feb570267980603aa 265 SUPERFAMILY SSF102114 58 144 1.7E-6 T 14-10-2018 PhaeoP54_03315 e370e70580135e3c530eac708e99b27f 204 TIGRFAM TIGR00101 ureG: urease accessory protein UreG 8 197 2.4E-97 T 14-10-2018 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 PhaeoP54_03315 e370e70580135e3c530eac708e99b27f 204 PIRSF PIRSF005624 2 200 3.6E-46 T 14-10-2018 IPR012202 [NiFe]-hydrogenase/urease maturation factor, Ni2-binding GTPase GO:0003924|GO:0016151 PhaeoP54_03315 e370e70580135e3c530eac708e99b27f 204 Gene3D G3DSA:3.40.50.300 8 200 5.0E-50 T 14-10-2018 PhaeoP54_03315 e370e70580135e3c530eac708e99b27f 204 SUPERFAMILY SSF52540 4 199 1.51E-39 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_03315 e370e70580135e3c530eac708e99b27f 204 Hamap MF_01389 Urease accessory protein UreG [ureG]. 6 204 45.022 T 14-10-2018 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 PhaeoP54_03315 e370e70580135e3c530eac708e99b27f 204 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 10 180 1.0E-37 T 14-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain PhaeoP54_03456 a12a5e11b81056e059c91b4b20429cc3 168 Pfam PF04186 FxsA cytoplasmic membrane protein 5 112 1.5E-34 T 14-10-2018 IPR007313 FxsA cytoplasmic membrane protein GO:0016020 PhaeoP54_00381 815ece0a9fd6d077558ba0d2f3639cc3 548 Gene3D G3DSA:3.40.720.10 1 502 3.2E-172 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 PhaeoP54_00381 815ece0a9fd6d077558ba0d2f3639cc3 548 SUPERFAMILY SSF53649 2 496 1.74E-113 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 PhaeoP54_00381 815ece0a9fd6d077558ba0d2f3639cc3 548 Pfam PF00884 Sulfatase 2 388 1.1E-51 T 14-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 PhaeoP54_03941 7e1af584c9e6bc365826c3e1527013cd 295 SUPERFAMILY SSF53850 90 288 9.41E-24 T 14-10-2018 PhaeoP54_03941 7e1af584c9e6bc365826c3e1527013cd 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 3.1E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PhaeoP54_03941 7e1af584c9e6bc365826c3e1527013cd 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 3.1E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PhaeoP54_03941 7e1af584c9e6bc365826c3e1527013cd 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 3.1E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PhaeoP54_03941 7e1af584c9e6bc365826c3e1527013cd 295 Pfam PF03466 LysR substrate binding domain 89 287 3.3E-22 T 14-10-2018 IPR005119 LysR, substrate-binding PhaeoP54_03941 7e1af584c9e6bc365826c3e1527013cd 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 6.4E-23 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PhaeoP54_03941 7e1af584c9e6bc365826c3e1527013cd 295 Gene3D G3DSA:1.10.10.10 3 92 1.0E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_03941 7e1af584c9e6bc365826c3e1527013cd 295 Gene3D G3DSA:3.40.190.290 93 292 2.4E-16 T 14-10-2018 PhaeoP54_03941 7e1af584c9e6bc365826c3e1527013cd 295 SUPERFAMILY SSF46785 2 84 1.44E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_01774 fa1f9f762273796ff833a3aeba1b00b9 123 Pfam PF05521 Phage head-tail joining protein 21 117 5.4E-17 T 14-10-2018 IPR008767 Bacteriophage SPP1, head-tail adaptor PhaeoP54_01774 fa1f9f762273796ff833a3aeba1b00b9 123 Gene3D G3DSA:2.40.10.270 13 122 8.4E-10 T 14-10-2018 IPR038666 Bacteriophage SPP1, head-tail adaptor superfamily PhaeoP54_01515 e055a5a5c2f8bed873b468d191dc16cd 193 SUPERFAMILY SSF54593 3 136 6.04E-32 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PhaeoP54_01515 e055a5a5c2f8bed873b468d191dc16cd 193 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 8 131 1.5E-15 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain PhaeoP54_01515 e055a5a5c2f8bed873b468d191dc16cd 193 Gene3D G3DSA:3.10.180.10 2 148 4.9E-37 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PhaeoP54_01712 73269a72e16a76ec6fb3fcf809aa2254 126 SUPERFAMILY SSF54427 3 121 6.93E-15 T 14-10-2018 IPR032710 NTF2-like domain superfamily PhaeoP54_01712 73269a72e16a76ec6fb3fcf809aa2254 126 Gene3D G3DSA:3.10.450.50 4 125 8.4E-18 T 14-10-2018 PhaeoP54_01712 73269a72e16a76ec6fb3fcf809aa2254 126 Pfam PF14534 Domain of unknown function (DUF4440) 9 116 9.0E-11 T 14-10-2018 IPR027843 Domain of unknown function DUF4440 PhaeoP54_00301 4fc2e35c66df4d701786b8cb7fdbbfba 127 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 122 1.2E-12 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain PhaeoP54_00301 4fc2e35c66df4d701786b8cb7fdbbfba 127 Gene3D G3DSA:3.10.180.10 1 127 1.1E-21 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PhaeoP54_00301 4fc2e35c66df4d701786b8cb7fdbbfba 127 SUPERFAMILY SSF54593 1 125 1.65E-27 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PhaeoP54_03154 1ab744049dd3bd2a87d2955a524e5ef8 316 Gene3D G3DSA:3.60.15.10 6 243 1.1E-39 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like PhaeoP54_03154 1ab744049dd3bd2a87d2955a524e5ef8 316 Pfam PF00753 Metallo-beta-lactamase superfamily 33 217 1.6E-8 T 14-10-2018 IPR001279 Metallo-beta-lactamase PhaeoP54_03154 1ab744049dd3bd2a87d2955a524e5ef8 316 SUPERFAMILY SSF56281 15 309 2.94E-55 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like PhaeoP54_03154 1ab744049dd3bd2a87d2955a524e5ef8 316 SMART SM00849 33 219 6.2E-12 T 14-10-2018 IPR001279 Metallo-beta-lactamase PhaeoP54_03669 d6534724b43ada0c8356c33f9d121d42 710 SUPERFAMILY SSF53720 11 448 1.03E-51 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 PhaeoP54_03669 d6534724b43ada0c8356c33f9d121d42 710 Pfam PF00171 Aldehyde dehydrogenase family 42 447 8.8E-39 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 PhaeoP54_03669 d6534724b43ada0c8356c33f9d121d42 710 SUPERFAMILY SSF54637 531 676 4.05E-34 T 14-10-2018 IPR029069 HotDog domain superfamily PhaeoP54_03669 d6534724b43ada0c8356c33f9d121d42 710 Gene3D G3DSA:3.10.129.10 532 709 8.1E-37 T 14-10-2018 PhaeoP54_03669 d6534724b43ada0c8356c33f9d121d42 710 Gene3D G3DSA:3.40.309.10 264 464 7.2E-81 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 PhaeoP54_03669 d6534724b43ada0c8356c33f9d121d42 710 Pfam PF01575 MaoC like domain 541 640 2.4E-20 T 14-10-2018 IPR002539 MaoC-like dehydratase domain PhaeoP54_03669 d6534724b43ada0c8356c33f9d121d42 710 TIGRFAM TIGR02278 PaaN-DH: phenylacetic acid degradation protein paaN 11 675 4.3E-177 T 14-10-2018 IPR011966 Phenylacetic acid degradation protein PaaN KEGG: 00360+3.3.2.12+1.2.1.91 PhaeoP54_03669 d6534724b43ada0c8356c33f9d121d42 710 Gene3D G3DSA:3.40.605.10 25 263 7.2E-81 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 PhaeoP54_00806 4c442644a015745bb40027da19e6f320 133 SMART SM00450 23 127 1.7E-14 T 14-10-2018 IPR001763 Rhodanese-like domain PhaeoP54_00806 4c442644a015745bb40027da19e6f320 133 Pfam PF00581 Rhodanese-like domain 24 123 1.6E-12 T 14-10-2018 IPR001763 Rhodanese-like domain PhaeoP54_00806 4c442644a015745bb40027da19e6f320 133 SUPERFAMILY SSF52821 13 129 1.96E-23 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily PhaeoP54_00806 4c442644a015745bb40027da19e6f320 133 Gene3D G3DSA:3.40.250.10 2 129 2.9E-30 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily PhaeoP54_01982 3b7ecf342bb154ab90c0006dfe73e8e2 159 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 5 21 1.2E-11 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 PhaeoP54_01982 3b7ecf342bb154ab90c0006dfe73e8e2 159 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 21 32 1.2E-11 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 PhaeoP54_01982 3b7ecf342bb154ab90c0006dfe73e8e2 159 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 32 51 1.2E-11 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 PhaeoP54_01982 3b7ecf342bb154ab90c0006dfe73e8e2 159 Pfam PF01037 Lrp/AsnC ligand binding domain 71 144 7.2E-17 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain PhaeoP54_01982 3b7ecf342bb154ab90c0006dfe73e8e2 159 Gene3D G3DSA:3.30.70.920 58 140 3.4E-20 T 14-10-2018 PhaeoP54_01982 3b7ecf342bb154ab90c0006dfe73e8e2 159 SMART SM00344 5 114 2.3E-39 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 PhaeoP54_01982 3b7ecf342bb154ab90c0006dfe73e8e2 159 Pfam PF13412 Winged helix-turn-helix DNA-binding 6 51 3.8E-15 T 14-10-2018 PhaeoP54_01982 3b7ecf342bb154ab90c0006dfe73e8e2 159 SUPERFAMILY SSF46785 4 65 1.04E-14 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_01982 3b7ecf342bb154ab90c0006dfe73e8e2 159 ProSitePatterns PS00519 AsnC-type HTH domain signature. 23 49 - T 14-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site PhaeoP54_01982 3b7ecf342bb154ab90c0006dfe73e8e2 159 Gene3D G3DSA:1.10.10.10 6 57 8.9E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_01982 3b7ecf342bb154ab90c0006dfe73e8e2 159 SUPERFAMILY SSF54909 66 153 3.89E-17 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel PhaeoP54_00070 94627718eab94dc84908a0ac3333b146 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 215 235 9.5E-39 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_00070 94627718eab94dc84908a0ac3333b146 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 9.5E-39 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_00070 94627718eab94dc84908a0ac3333b146 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 9.5E-39 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_00070 94627718eab94dc84908a0ac3333b146 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 131 147 9.5E-39 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_00070 94627718eab94dc84908a0ac3333b146 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 9.5E-39 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_00070 94627718eab94dc84908a0ac3333b146 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 9.5E-39 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_00070 94627718eab94dc84908a0ac3333b146 253 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 250 8.1E-64 T 14-10-2018 PhaeoP54_00070 94627718eab94dc84908a0ac3333b146 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 137 145 1.4E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_00070 94627718eab94dc84908a0ac3333b146 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 1.4E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_00070 94627718eab94dc84908a0ac3333b146 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 1.4E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PhaeoP54_00070 94627718eab94dc84908a0ac3333b146 253 Gene3D G3DSA:3.40.50.720 1 253 7.9E-84 T 14-10-2018 PhaeoP54_00070 94627718eab94dc84908a0ac3333b146 253 SUPERFAMILY SSF51735 5 252 3.16E-80 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PhaeoP54_02127 19fdde7fd5718a5babb6ed641f9e05ed 271 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 85 259 2.2E-26 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PhaeoP54_02127 19fdde7fd5718a5babb6ed641f9e05ed 271 Gene3D G3DSA:1.10.3720.10 59 264 4.9E-17 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_02127 19fdde7fd5718a5babb6ed641f9e05ed 271 SUPERFAMILY SSF161098 62 249 3.27E-21 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_02127 19fdde7fd5718a5babb6ed641f9e05ed 271 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 8 32 4.0E-6 T 14-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain PhaeoP54_01230 d48a1a428f95b6e97f03a04d21330c63 293 SUPERFAMILY SSF53955 47 291 2.62E-65 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily PhaeoP54_01230 d48a1a428f95b6e97f03a04d21330c63 293 Gene3D G3DSA:1.10.530.10 100 259 6.6E-42 T 14-10-2018 PhaeoP54_01230 d48a1a428f95b6e97f03a04d21330c63 293 Gene3D G3DSA:1.10.8.350 74 232 6.6E-42 T 14-10-2018 PhaeoP54_01230 d48a1a428f95b6e97f03a04d21330c63 293 Pfam PF13406 Transglycosylase SLT domain 59 261 1.2E-60 T 14-10-2018 IPR031304 Transglycosylase SLT domain 2 PhaeoP54_00372 ebdf020282305bf8b08f7629a6c26535 151 Pfam PF00582 Universal stress protein family 1 119 3.8E-13 T 14-10-2018 IPR006016 UspA PhaeoP54_00372 ebdf020282305bf8b08f7629a6c26535 151 Gene3D G3DSA:3.40.50.620 1 139 7.2E-14 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PhaeoP54_00372 ebdf020282305bf8b08f7629a6c26535 151 SUPERFAMILY SSF52402 1 139 2.09E-13 T 14-10-2018 PhaeoP54_02402 fd8e1da955c3a93464bd26e9e4e09158 194 Pfam PF09860 Uncharacterized protein conserved in bacteria (DUF2087) 86 156 6.7E-20 T 14-10-2018 IPR018656 Domain of unknown function DUF2087 PhaeoP54_02378 90683a121af0d87f68f2d2ac7a13cc66 95 Gene3D G3DSA:2.30.33.40 1 95 8.5E-38 T 14-10-2018 IPR037124 GroES chaperonin superfamily GO:0005737|GO:0006457 PhaeoP54_02378 90683a121af0d87f68f2d2ac7a13cc66 95 PRINTS PR00297 10kDa chaperonin signature 81 94 9.7E-32 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 PhaeoP54_02378 90683a121af0d87f68f2d2ac7a13cc66 95 PRINTS PR00297 10kDa chaperonin signature 3 18 9.7E-32 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 PhaeoP54_02378 90683a121af0d87f68f2d2ac7a13cc66 95 PRINTS PR00297 10kDa chaperonin signature 25 46 9.7E-32 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 PhaeoP54_02378 90683a121af0d87f68f2d2ac7a13cc66 95 PRINTS PR00297 10kDa chaperonin signature 60 72 9.7E-32 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 PhaeoP54_02378 90683a121af0d87f68f2d2ac7a13cc66 95 Hamap MF_00580 10 kDa chaperonin [groS]. 2 95 26.143 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 PhaeoP54_02378 90683a121af0d87f68f2d2ac7a13cc66 95 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 14-10-2018 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 PhaeoP54_02378 90683a121af0d87f68f2d2ac7a13cc66 95 SMART SM00883 2 94 1.0E-55 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 PhaeoP54_02378 90683a121af0d87f68f2d2ac7a13cc66 95 Pfam PF00166 Chaperonin 10 Kd subunit 3 94 3.2E-34 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 PhaeoP54_02378 90683a121af0d87f68f2d2ac7a13cc66 95 SUPERFAMILY SSF50129 1 95 2.83E-33 T 14-10-2018 IPR011032 GroES-like superfamily PhaeoP54_02881 64dd8c903397582d635559fe18fa190e 230 SUPERFAMILY SSF53850 2 221 1.01E-49 T 14-10-2018 PhaeoP54_02881 64dd8c903397582d635559fe18fa190e 230 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 3 206 5.5E-52 T 14-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 PhaeoP54_02881 64dd8c903397582d635559fe18fa190e 230 Pfam PF01634 ATP phosphoribosyltransferase 55 229 2.6E-34 T 14-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 PhaeoP54_02881 64dd8c903397582d635559fe18fa190e 230 Gene3D G3DSA:3.40.190.10 97 202 1.1E-45 T 14-10-2018 PhaeoP54_02881 64dd8c903397582d635559fe18fa190e 230 Gene3D G3DSA:3.40.190.10 3 229 1.1E-45 T 14-10-2018 PhaeoP54_01086 50b9691e4f116c85fe7940942526660e 172 Gene3D G3DSA:3.30.240.20 89 161 5.1E-19 T 14-10-2018 IPR023090 UPF0702, alpha/beta domain superfamily PhaeoP54_01086 50b9691e4f116c85fe7940942526660e 172 Pfam PF04239 Protein of unknown function (DUF421) 98 159 1.0E-12 T 14-10-2018 IPR007353 Protein of unknown function DUF421 PhaeoP54_03211 ab8d0c0e743e2d3057f6520c63341083 409 Pfam PF02646 RmuC family 107 382 1.6E-59 T 14-10-2018 IPR003798 DNA recombination RmuC PhaeoP54_00737 c9db097a7af91576498b6d51713e2ebd 136 Gene3D G3DSA:3.40.50.620 1 134 2.0E-27 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PhaeoP54_00737 c9db097a7af91576498b6d51713e2ebd 136 SUPERFAMILY SSF52402 1 134 1.93E-25 T 14-10-2018 PhaeoP54_00737 c9db097a7af91576498b6d51713e2ebd 136 Pfam PF00582 Universal stress protein family 1 134 6.2E-25 T 14-10-2018 IPR006016 UspA PhaeoP54_00737 c9db097a7af91576498b6d51713e2ebd 136 PRINTS PR01438 Universal stress protein signature 95 107 6.4E-7 T 14-10-2018 IPR006015 Universal stress protein A PhaeoP54_00737 c9db097a7af91576498b6d51713e2ebd 136 PRINTS PR01438 Universal stress protein signature 112 134 6.4E-7 T 14-10-2018 IPR006015 Universal stress protein A PhaeoP54_00366 ff799f7f91f1690efa31aa3fa64f3269 364 Pfam PF02653 Branched-chain amino acid transport system / permease component 57 340 3.0E-30 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 PhaeoP54_02787 5df55d5be2353d83a3ab82083537ce7e 295 Pfam PF04976 DMSO reductase anchor subunit (DmsC) 1 282 4.9E-35 T 14-10-2018 IPR007059 DMSO reductase anchor subunit (DmsC) GO:0016021|GO:0019645 PhaeoP54_03531 5ed309d5a550245d9b7a955cc093e467 328 Pfam PF13704 Glycosyl transferase family 2 41 137 1.9E-26 T 14-10-2018 PhaeoP54_03531 5ed309d5a550245d9b7a955cc093e467 328 SUPERFAMILY SSF53448 33 166 6.19E-7 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PhaeoP54_02322 9b216632b7e8ce989f027f774b4c94fc 129 Pfam PF04134 Protein of unknown function, DUF393 11 110 2.7E-20 T 14-10-2018 IPR007263 Protein of unknown function DUF393 PhaeoP54_01022 4f61de3eddc10c14ecc12d2ccf4e13dd 101 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 7 96 9.8E-25 T 14-10-2018 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like PhaeoP54_01022 4f61de3eddc10c14ecc12d2ccf4e13dd 101 Hamap MF_01456 NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic [ndhE]. 2 101 20.337 T 14-10-2018 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 PhaeoP54_01291 ee39e919f4bd1ee592ef7c8241e7fe21 196 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 33 174 3.0E-21 T 14-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ PhaeoP54_02355 3a6b6a7a7751d9d99309e6ea7dc134c5 166 Pfam PF10722 Putative bacterial sensory transduction regulator 14 142 8.1E-30 T 14-10-2018 IPR019660 Putative sensory transduction regulator YbjN PhaeoP54_03376 85d1a06a195df5137d5cce8b0b58a90b 464 Gene3D G3DSA:3.90.1150.10 17 449 3.9E-189 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 PhaeoP54_03376 85d1a06a195df5137d5cce8b0b58a90b 464 PIRSF PIRSF000521 37 451 4.8E-27 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PhaeoP54_03376 85d1a06a195df5137d5cce8b0b58a90b 464 Gene3D G3DSA:3.40.640.10 71 344 3.9E-189 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PhaeoP54_03376 85d1a06a195df5137d5cce8b0b58a90b 464 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 259 296 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PhaeoP54_03376 85d1a06a195df5137d5cce8b0b58a90b 464 Pfam PF00202 Aminotransferase class-III 37 444 2.0E-90 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PhaeoP54_03376 85d1a06a195df5137d5cce8b0b58a90b 464 SUPERFAMILY SSF53383 11 450 1.85E-123 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PhaeoP54_03294 9cb9681b5481358f8d57d4b42e0805cd 367 Gene3D G3DSA:3.40.50.150 12 263 5.1E-71 T 14-10-2018 PhaeoP54_03294 9cb9681b5481358f8d57d4b42e0805cd 367 Pfam PF01555 DNA methylase 34 256 2.8E-56 T 14-10-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 PhaeoP54_03294 9cb9681b5481358f8d57d4b42e0805cd 367 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 37 43 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 PhaeoP54_03294 9cb9681b5481358f8d57d4b42e0805cd 367 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 216 234 1.4E-40 T 14-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 PhaeoP54_03294 9cb9681b5481358f8d57d4b42e0805cd 367 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 33 47 1.4E-40 T 14-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 PhaeoP54_03294 9cb9681b5481358f8d57d4b42e0805cd 367 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 82 102 1.4E-40 T 14-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 PhaeoP54_03294 9cb9681b5481358f8d57d4b42e0805cd 367 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 197 214 1.4E-40 T 14-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 PhaeoP54_03294 9cb9681b5481358f8d57d4b42e0805cd 367 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 239 259 1.4E-40 T 14-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 PhaeoP54_03294 9cb9681b5481358f8d57d4b42e0805cd 367 SUPERFAMILY SSF53335 12 259 8.33E-71 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PhaeoP54_01815 c9f002588822bd24cfbead435abe3220 201 Gene3D G3DSA:1.25.40.10 84 199 1.1E-11 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 PhaeoP54_01815 c9f002588822bd24cfbead435abe3220 201 SUPERFAMILY SSF48452 82 192 2.05E-11 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 PhaeoP54_02650 543d51ca78621bf8c60d4143bc277f67 325 Pfam PF08376 Nitrate and nitrite sensing 51 287 4.6E-34 T 14-10-2018 IPR013587 Nitrate/nitrite sensing protein PhaeoP54_00113 6b1af81fe8b14a6db9516c28d9f61ba5 114 Pfam PF10984 Protein of unknown function (DUF2794) 18 102 4.3E-41 T 14-10-2018 IPR021252 Protein of unknown function DUF2794 PhaeoP54_00148 f16596fdfa85d8cbb2724f687bccf2f2 179 Pfam PF00583 Acetyltransferase (GNAT) family 46 135 9.2E-16 T 14-10-2018 IPR000182 GNAT domain PhaeoP54_00148 f16596fdfa85d8cbb2724f687bccf2f2 179 SUPERFAMILY SSF55729 1 163 6.08E-30 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase PhaeoP54_00148 f16596fdfa85d8cbb2724f687bccf2f2 179 Gene3D G3DSA:3.40.630.30 1 164 4.5E-29 T 14-10-2018 PhaeoP54_00641 b936b0feaf4ec51f03a044d4a498cbe3 161 Pfam PF10003 Integral membrane protein (DUF2244) 18 157 5.1E-42 T 14-10-2018 IPR019253 Protein of unknown function DUF2244, transmembrane PhaeoP54_00813 0344dbe344ee6fcec33bdf62003a3073 287 SMART SM00530 17 74 3.7E-9 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PhaeoP54_00813 0344dbe344ee6fcec33bdf62003a3073 287 SUPERFAMILY SSF47413 13 80 3.26E-10 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 PhaeoP54_00813 0344dbe344ee6fcec33bdf62003a3073 287 Pfam PF01381 Helix-turn-helix 22 74 1.1E-9 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PhaeoP54_00813 0344dbe344ee6fcec33bdf62003a3073 287 Gene3D G3DSA:1.10.260.40 4 80 2.0E-10 T 14-10-2018 PhaeoP54_03366 4ca96f78955117d41e3b215822280582 668 Pfam PF05378 Hydantoinase/oxoprolinase N-terminal region 5 168 3.6E-32 T 14-10-2018 IPR008040 Hydantoinaseoxoprolinase, N-terminal Reactome: R-HSA-174403|Reactome: R-HSA-5578998 PhaeoP54_03366 4ca96f78955117d41e3b215822280582 668 SUPERFAMILY SSF53067 1 115 1.07E-12 T 14-10-2018 PhaeoP54_03366 4ca96f78955117d41e3b215822280582 668 Pfam PF01968 Hydantoinase/oxoprolinase 188 574 1.3E-27 T 14-10-2018 IPR002821 Hydantoinase A/oxoprolinase GO:0016787 Reactome: R-HSA-174403|Reactome: R-HSA-5578998 PhaeoP54_02212 0cf98569c976b19f1183e5b7750a9857 538 ProSitePatterns PS00455 Putative AMP-binding domain signature. 200 211 - T 14-10-2018 IPR020845 AMP-binding, conserved site PhaeoP54_02212 0cf98569c976b19f1183e5b7750a9857 538 Pfam PF00501 AMP-binding enzyme 48 442 6.6E-78 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 PhaeoP54_02212 0cf98569c976b19f1183e5b7750a9857 538 Pfam PF13193 AMP-binding enzyme C-terminal domain 451 529 9.7E-22 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain PhaeoP54_02212 0cf98569c976b19f1183e5b7750a9857 538 Gene3D G3DSA:3.30.300.30 436 538 1.2E-26 T 14-10-2018 PhaeoP54_02212 0cf98569c976b19f1183e5b7750a9857 538 SUPERFAMILY SSF56801 21 536 9.29E-131 T 14-10-2018 PhaeoP54_02212 0cf98569c976b19f1183e5b7750a9857 538 Gene3D G3DSA:3.40.50.12780 31 435 1.7E-98 T 14-10-2018 PhaeoP54_02599 72a51d2d74b2e03fd6421125f51318d3 87 SUPERFAMILY SSF68912 53 84 6.67E-5 T 14-10-2018 IPR036269 Rho termination factor, N-terminal domain superfamily PhaeoP54_02599 72a51d2d74b2e03fd6421125f51318d3 87 Pfam PF07498 Rho termination factor, N-terminal domain 58 84 2.5E-6 T 14-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 PhaeoP54_00977 ba2843a5149bd25babdf7c6b6a12f249 123 Pfam PF02627 Carboxymuconolactone decarboxylase family 32 116 2.2E-14 T 14-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 PhaeoP54_00977 ba2843a5149bd25babdf7c6b6a12f249 123 SUPERFAMILY SSF69118 4 121 1.92E-27 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 PhaeoP54_00977 ba2843a5149bd25babdf7c6b6a12f249 123 Gene3D G3DSA:1.20.1290.10 3 123 6.6E-26 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 PhaeoP54_03431 9bf121452d9f282bc0b6e64da9ab5a63 94 SUPERFAMILY SSF55718 16 93 1.5E-20 T 14-10-2018 IPR036527 SCP2 sterol-binding domain superfamily PhaeoP54_03431 9bf121452d9f282bc0b6e64da9ab5a63 94 Gene3D G3DSA:3.30.1050.10 3 94 3.8E-19 T 14-10-2018 IPR036527 SCP2 sterol-binding domain superfamily PhaeoP54_03431 9bf121452d9f282bc0b6e64da9ab5a63 94 Pfam PF02036 SCP-2 sterol transfer family 18 93 1.1E-18 T 14-10-2018 IPR003033 SCP2 sterol-binding domain PhaeoP54_03045 e3d0538608b2436afdd1cab866fb0c60 274 Pfam PF11316 Putative rhamnosyl transferase 7 243 4.8E-61 T 14-10-2018 IPR021466 Putative rhamnosyl transferase PhaeoP54_02407 3dc2c740384f4db812c110c41aced665 287 Pfam PF06904 Extensin-like protein C-terminus 137 287 2.8E-50 T 14-10-2018 IPR009683 Extensin-like, C-terminal PhaeoP54_03730 8a61a604f00b6d4093544819e3c7e109 462 Pfam PF03929 PepSY-associated TM region 22 399 1.5E-59 T 14-10-2018 IPR005625 PepSY-associated TM protein PhaeoP54_00595 298bc7ab1e23dbb8dda5dee7f0b7e16b 473 PIRSF PIRSF004919 12 472 1.9E-129 T 14-10-2018 IPR025502 TldD PhaeoP54_00595 298bc7ab1e23dbb8dda5dee7f0b7e16b 473 SUPERFAMILY SSF111283 19 470 3.01E-125 T 14-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 PhaeoP54_00595 298bc7ab1e23dbb8dda5dee7f0b7e16b 473 Gene3D G3DSA:3.30.2290.10 13 214 1.6E-12 T 14-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal PhaeoP54_00595 298bc7ab1e23dbb8dda5dee7f0b7e16b 473 Pfam PF01523 Putative modulator of DNA gyrase 33 323 1.0E-62 T 14-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 PhaeoP54_03124 ceb6f1002956991c3a522c4a462573e7 74 SUPERFAMILY SSF81333 5 73 7.45E-15 T 14-10-2018 IPR035921 F/V-ATP synthase subunit C superfamily PhaeoP54_03124 ceb6f1002956991c3a522c4a462573e7 74 Gene3D G3DSA:1.20.20.10 3 74 3.0E-21 T 14-10-2018 IPR038662 F1F0 ATP synthase subunit C superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 PhaeoP54_03124 ceb6f1002956991c3a522c4a462573e7 74 Pfam PF00137 ATP synthase subunit C 8 70 3.9E-9 T 14-10-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 PhaeoP54_03124 ceb6f1002956991c3a522c4a462573e7 74 PRINTS PR00124 ATP synthase C subunit signature 46 71 2.8E-18 T 14-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 PhaeoP54_03124 ceb6f1002956991c3a522c4a462573e7 74 PRINTS PR00124 ATP synthase C subunit signature 8 27 2.8E-18 T 14-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 PhaeoP54_03124 ceb6f1002956991c3a522c4a462573e7 74 PRINTS PR00124 ATP synthase C subunit signature 29 44 2.8E-18 T 14-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 PhaeoP54_03124 ceb6f1002956991c3a522c4a462573e7 74 Hamap MF_01396 ATP synthase subunit c [atpH]. 3 71 13.49 T 14-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 PhaeoP54_00341 2a36352e52743faadc13321712cd8075 343 PIRSF PIRSF021494 1 343 1.3E-158 T 14-10-2018 IPR016790 Thiol ester hydratase, Rv0216, predicted KEGG: 00630+4.2.1.148|KEGG: 00660+4.2.1.148|KEGG: 00720+4.2.1.148|MetaCyc: PWY-5741|MetaCyc: PWY-5744|MetaCyc: PWY-6728|MetaCyc: PWY-7854 PhaeoP54_00341 2a36352e52743faadc13321712cd8075 343 Pfam PF13452 N-terminal half of MaoC dehydratase 35 139 9.1E-6 T 14-10-2018 IPR039569 N-terminal of MaoC-like dehydratase Reactome: R-HSA-193368|Reactome: R-HSA-2046106|Reactome: R-HSA-389887|Reactome: R-HSA-390247|Reactome: R-HSA-9033241|Reactome: R-HSA-9033500 PhaeoP54_00341 2a36352e52743faadc13321712cd8075 343 SUPERFAMILY SSF54637 190 342 3.98E-27 T 14-10-2018 IPR029069 HotDog domain superfamily PhaeoP54_00341 2a36352e52743faadc13321712cd8075 343 Gene3D G3DSA:3.10.129.10 1 343 8.7E-89 T 14-10-2018 PhaeoP54_00341 2a36352e52743faadc13321712cd8075 343 SUPERFAMILY SSF54637 2 151 6.47E-37 T 14-10-2018 IPR029069 HotDog domain superfamily PhaeoP54_00877 9b4927a95a7c4ba08104634cc5359f63 65 Pfam PF02597 ThiS family 3 65 1.6E-12 T 14-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 PhaeoP54_00877 9b4927a95a7c4ba08104634cc5359f63 65 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 3 65 3.3E-17 T 14-10-2018 IPR010035 ThiS, thiamine-biosynthesis PhaeoP54_00877 9b4927a95a7c4ba08104634cc5359f63 65 SUPERFAMILY SSF54285 2 64 8.9E-16 T 14-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp PhaeoP54_00877 9b4927a95a7c4ba08104634cc5359f63 65 Gene3D G3DSA:3.10.20.30 1 65 2.0E-19 T 14-10-2018 IPR012675 Beta-grasp domain superfamily PhaeoP54_00119 580bcbaac581eecbcd7e8bbbdacb8345 392 Gene3D G3DSA:1.20.1250.20 3 187 1.8E-24 T 14-10-2018 PhaeoP54_00119 580bcbaac581eecbcd7e8bbbdacb8345 392 Pfam PF07690 Major Facilitator Superfamily 8 254 7.1E-22 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PhaeoP54_00119 580bcbaac581eecbcd7e8bbbdacb8345 392 SUPERFAMILY SSF103473 5 387 7.32E-48 T 14-10-2018 IPR036259 MFS transporter superfamily PhaeoP54_00119 580bcbaac581eecbcd7e8bbbdacb8345 392 Gene3D G3DSA:1.20.1250.20 194 390 2.0E-15 T 14-10-2018 PhaeoP54_00915 486291d3800a791a8c4db808034f47b1 72 Pfam PF06568 Domain of unknown function (DUF1127) 27 61 1.3E-13 T 14-10-2018 IPR009506 Protein of unknown function DUF1127 PhaeoP54_02445 52e45a36a4398e59313733d274cce690 318 Gene3D G3DSA:3.40.50.720 131 292 8.8E-48 T 14-10-2018 PhaeoP54_02445 52e45a36a4398e59313733d274cce690 318 Gene3D G3DSA:3.30.1780.10 9 314 8.8E-48 T 14-10-2018 IPR023401 Ornithine cyclodeaminase, N-terminal Reactome: R-HSA-71064 PhaeoP54_02445 52e45a36a4398e59313733d274cce690 318 Pfam PF02423 Ornithine cyclodeaminase/mu-crystallin family 10 233 2.3E-26 T 14-10-2018 IPR003462 Ornithine cyclodeaminase/mu-crystallin Reactome: R-HSA-71064 PhaeoP54_02445 52e45a36a4398e59313733d274cce690 318 SUPERFAMILY SSF51735 5 317 6.19E-46 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PhaeoP54_03939 3c4bad3b6e45f0d43309e21720915853 821 Hamap MF_01871 UPF0753 protein . 14 795 21.455 T 14-10-2018 IPR018752 Uncharacterised protein family UPF0753 PhaeoP54_03939 3c4bad3b6e45f0d43309e21720915853 821 Pfam PF10070 Uncharacterized protein conserved in bacteria (DUF2309) 20 780 1.1E-235 T 14-10-2018 IPR018752 Uncharacterised protein family UPF0753 PhaeoP54_04028 b16b834840e5207d8a96481c452ae317 81 Pfam PF07704 Rv0623-like transcription factor 1 79 1.2E-14 T 14-10-2018 IPR011660 Antitoxin VapB-like PhaeoP54_00794 def27cded3288b8f0d9fdcf8bbfea3ce 364 PIRSF PIRSF028101 2 363 3.2E-96 T 14-10-2018 IPR008311 Uncharacterised conserved protein UCP028101 PhaeoP54_00794 def27cded3288b8f0d9fdcf8bbfea3ce 364 Pfam PF07433 Protein of unknown function (DUF1513) 59 362 1.1E-107 T 14-10-2018 IPR008311 Uncharacterised conserved protein UCP028101 PhaeoP54_00794 def27cded3288b8f0d9fdcf8bbfea3ce 364 Gene3D G3DSA:2.130.10.10 50 245 2.7E-7 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 PhaeoP54_00794 def27cded3288b8f0d9fdcf8bbfea3ce 364 SUPERFAMILY SSF50969 40 314 1.18E-17 T 14-10-2018 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like PhaeoP54_01937 15ca74f80f03f135f139936bd8e9c8b8 474 Gene3D G3DSA:3.90.1300.10 2 472 9.9E-132 T 14-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 PhaeoP54_01937 15ca74f80f03f135f139936bd8e9c8b8 474 SUPERFAMILY SSF75304 4 454 1.31E-123 T 14-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 PhaeoP54_01937 15ca74f80f03f135f139936bd8e9c8b8 474 Pfam PF01425 Amidase 25 447 1.9E-91 T 14-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 PhaeoP54_02576 1e742fec34a6beba37db8ae0dbb56ed9 228 SUPERFAMILY SSF144091 9 220 1.83E-26 T 14-10-2018 PhaeoP54_02576 1e742fec34a6beba37db8ae0dbb56ed9 228 Gene3D G3DSA:1.20.1540.10 44 216 5.4E-12 T 14-10-2018 IPR035952 Rhomboid-like superfamily PhaeoP54_02576 1e742fec34a6beba37db8ae0dbb56ed9 228 Pfam PF01694 Rhomboid family 74 214 5.6E-18 T 14-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 PhaeoP54_03684 74bf3dcb094231fdf0e8efeb76bb8cf5 138 Pfam PF13279 Thioesterase-like superfamily 13 129 7.1E-13 T 14-10-2018 PhaeoP54_03684 74bf3dcb094231fdf0e8efeb76bb8cf5 138 Gene3D G3DSA:3.10.129.10 2 138 2.4E-33 T 14-10-2018 PhaeoP54_03684 74bf3dcb094231fdf0e8efeb76bb8cf5 138 SUPERFAMILY SSF54637 6 134 7.28E-30 T 14-10-2018 IPR029069 HotDog domain superfamily PhaeoP54_00886 936eb72cb757a4d43cec66b6a8bbdbe4 262 Gene3D G3DSA:3.40.50.150 37 261 9.6E-17 T 14-10-2018 PhaeoP54_00886 936eb72cb757a4d43cec66b6a8bbdbe4 262 Pfam PF13489 Methyltransferase domain 35 181 1.4E-8 T 14-10-2018 PhaeoP54_00886 936eb72cb757a4d43cec66b6a8bbdbe4 262 SUPERFAMILY SSF53335 28 217 1.08E-18 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PhaeoP54_01267 229cbc45c48be5b3688836e4a45af4a3 305 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 119 301 1.9E-20 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PhaeoP54_01267 229cbc45c48be5b3688836e4a45af4a3 305 SUPERFAMILY SSF161098 101 285 1.96E-18 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_01267 229cbc45c48be5b3688836e4a45af4a3 305 Gene3D G3DSA:1.10.3720.10 99 301 3.7E-15 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_02856 f4f022619af3e6cb8dc3e1c5f710a091 250 Gene3D G3DSA:1.20.120.1760 2 175 5.2E-15 T 14-10-2018 PhaeoP54_02856 f4f022619af3e6cb8dc3e1c5f710a091 250 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 59 81 - T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 PhaeoP54_02856 f4f022619af3e6cb8dc3e1c5f710a091 250 Pfam PF01066 CDP-alcohol phosphatidyltransferase 18 81 1.2E-12 T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 PhaeoP54_02991 b14806460c5b5f904cf93defc8c3048d 152 Pfam PF04214 Protein of unknown function, DUF 57 125 7.7E-33 T 14-10-2018 IPR007332 Protein of unknown function DUF411 PhaeoP54_00643 548d6d44977361ca7ddcf03c0a550344 141 PRINTS PR00332 Histidine triad family signature 9 25 1.8E-17 T 14-10-2018 IPR001310 Histidine triad (HIT) protein PhaeoP54_00643 548d6d44977361ca7ddcf03c0a550344 141 PRINTS PR00332 Histidine triad family signature 30 48 1.8E-17 T 14-10-2018 IPR001310 Histidine triad (HIT) protein PhaeoP54_00643 548d6d44977361ca7ddcf03c0a550344 141 PRINTS PR00332 Histidine triad family signature 97 107 1.8E-17 T 14-10-2018 IPR001310 Histidine triad (HIT) protein PhaeoP54_00643 548d6d44977361ca7ddcf03c0a550344 141 Pfam PF01230 HIT domain 16 110 2.0E-24 T 14-10-2018 IPR001310 Histidine triad (HIT) protein PhaeoP54_00643 548d6d44977361ca7ddcf03c0a550344 141 SUPERFAMILY SSF54197 6 137 3.09E-39 T 14-10-2018 IPR036265 HIT-like superfamily PhaeoP54_00643 548d6d44977361ca7ddcf03c0a550344 141 Gene3D G3DSA:3.30.428.10 2 138 4.0E-39 T 14-10-2018 IPR036265 HIT-like superfamily PhaeoP54_01475 d5a56d7bb80832239662f783078624aa 191 Pfam PF04366 Las17-binding protein actin regulator 105 187 7.2E-9 T 14-10-2018 IPR007461 Ysc84 actin-binding domain PhaeoP54_03385 473f60bc25cf69c69f30623b19c5f290 266 Gene3D G3DSA:3.90.550.10 1 261 5.4E-69 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PhaeoP54_03385 473f60bc25cf69c69f30623b19c5f290 266 SUPERFAMILY SSF53448 3 260 3.33E-50 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PhaeoP54_03385 473f60bc25cf69c69f30623b19c5f290 266 Pfam PF02348 Cytidylyltransferase 5 232 3.5E-31 T 14-10-2018 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 PhaeoP54_03627 7d6e13e94ddac13fcf040622af6fa823 497 Pfam PF13440 Polysaccharide biosynthesis protein 50 335 1.8E-51 T 14-10-2018 PhaeoP54_03843 7543de60735824b56b48a867900846ba 658 SUPERFAMILY SSF55874 33 164 5.11E-12 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PhaeoP54_03843 7543de60735824b56b48a867900846ba 658 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 33 140 7.5E-8 T 14-10-2018 PhaeoP54_03843 7543de60735824b56b48a867900846ba 658 Gene3D G3DSA:3.30.565.10 25 202 7.4E-11 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PhaeoP54_02825 e3c8f0f2324052aa98423e8bbe17b946 97 SUPERFAMILY SSF55248 1 96 1.02E-34 T 14-10-2018 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 PhaeoP54_02825 e3c8f0f2324052aa98423e8bbe17b946 97 Gene3D G3DSA:3.30.1360.20 1 97 3.8E-36 T 14-10-2018 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 PhaeoP54_02825 e3c8f0f2324052aa98423e8bbe17b946 97 Pfam PF01329 Pterin 4 alpha carbinolamine dehydratase 4 95 5.0E-28 T 14-10-2018 IPR001533 Pterin 4 alpha carbinolamine dehydratase GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 PhaeoP54_02825 e3c8f0f2324052aa98423e8bbe17b946 97 Hamap MF_00434 Putative pterin-4-alpha-carbinolamine dehydratase. 2 97 22.592 T 14-10-2018 IPR001533 Pterin 4 alpha carbinolamine dehydratase GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 PhaeoP54_00817 9d1994484c872ae50fb722ea16faf0b0 255 Gene3D G3DSA:3.90.79.10 24 224 4.2E-38 T 14-10-2018 PhaeoP54_00817 9d1994484c872ae50fb722ea16faf0b0 255 SUPERFAMILY SSF55811 21 219 3.33E-20 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 PhaeoP54_03668 b1de7c219ee3afb540ba91ccf7da5e7b 369 SUPERFAMILY SSF51735 23 311 1.16E-35 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PhaeoP54_03668 b1de7c219ee3afb540ba91ccf7da5e7b 369 Gene3D G3DSA:3.40.50.720 23 349 7.9E-50 T 14-10-2018 PhaeoP54_03668 b1de7c219ee3afb540ba91ccf7da5e7b 369 Pfam PF13460 NAD(P)H-binding 29 173 2.7E-12 T 14-10-2018 IPR016040 NAD(P)-binding domain PhaeoP54_03994 f3aaaee7231b0e9532bd857d57655b15 230 Gene3D G3DSA:2.60.40.2500 129 229 4.2E-26 T 14-10-2018 IPR038161 VirB9/CagX/TrbG, C-terminal domain superfamily PhaeoP54_03994 f3aaaee7231b0e9532bd857d57655b15 230 Pfam PF03524 Conjugal transfer protein 33 224 1.1E-49 T 14-10-2018 IPR010258 Conjugal transfer, TrbG/VirB9/CagX PhaeoP54_01415 749da41f5194ba4c46eca941ebc119bc 100 Gene3D G3DSA:1.10.10.10 18 100 3.6E-35 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_01415 749da41f5194ba4c46eca941ebc119bc 100 Pfam PF06627 Protein of unknown function (DUF1153) 12 98 1.1E-37 T 14-10-2018 IPR009534 Protein of unknown function DUF1153 PhaeoP54_01415 749da41f5194ba4c46eca941ebc119bc 100 SUPERFAMILY SSF48295 9 99 9.94E-26 T 14-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 PhaeoP54_00574 10de4e73f01e1316864ccbabb0d06966 224 SUPERFAMILY SSF56300 26 161 1.12E-14 T 14-10-2018 PhaeoP54_00574 10de4e73f01e1316864ccbabb0d06966 224 Pfam PF00149 Calcineurin-like phosphoesterase 27 123 1.1E-7 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 PhaeoP54_00574 10de4e73f01e1316864ccbabb0d06966 224 Gene3D G3DSA:3.60.21.10 27 184 2.6E-12 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like PhaeoP54_00574 10de4e73f01e1316864ccbabb0d06966 224 TIGRFAM TIGR04123 P_estr_lig_assc: metallophosphoesterase, DNA ligase-associated 7 199 1.9E-58 T 14-10-2018 IPR026336 Metallophosphoesterase, DNA ligase-associated PhaeoP54_00574 10de4e73f01e1316864ccbabb0d06966 224 PIRSF PIRSF000887 6 214 2.6E-39 T 14-10-2018 IPR024173 Phosphoesterase, MJ0037 PhaeoP54_02990 38f5a99ca8a31f97a8f4c808abf4a999 165 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 5 77 1.8E-9 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 PhaeoP54_02990 38f5a99ca8a31f97a8f4c808abf4a999 165 SMART SM00855 4 111 0.0013 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 PhaeoP54_02990 38f5a99ca8a31f97a8f4c808abf4a999 165 SUPERFAMILY SSF53254 1 161 2.04E-29 T 14-10-2018 IPR029033 Histidine phosphatase superfamily PhaeoP54_02990 38f5a99ca8a31f97a8f4c808abf4a999 165 Gene3D G3DSA:3.40.50.1240 1 161 4.0E-39 T 14-10-2018 IPR029033 Histidine phosphatase superfamily PhaeoP54_00218 c5bde8ae29491f2798462315e7de1b62 445 Pfam PF04285 Protein of unknown function (DUF444) 3 433 1.4E-165 T 14-10-2018 IPR006698 Uncharacterised protein family UPF0229 PhaeoP54_00218 c5bde8ae29491f2798462315e7de1b62 445 Hamap MF_01232 UPF0229 protein YeaH [yeaH]. 1 438 34.886 T 14-10-2018 IPR006698 Uncharacterised protein family UPF0229 PhaeoP54_02010 c914b2d952e6565c65f7be7e8e6908d6 101 Pfam PF10048 Predicted integral membrane protein (DUF2282) 31 79 7.9E-25 T 14-10-2018 IPR018740 Protein of unknown function DUF2282, integral membrane PhaeoP54_01671 ba3ea3fbecdf17f862fef6d68cef2f5a 556 SUPERFAMILY SSF88713 349 547 1.25E-29 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 PhaeoP54_01671 ba3ea3fbecdf17f862fef6d68cef2f5a 556 Gene3D G3DSA:3.20.20.370 333 555 1.7E-13 T 14-10-2018 PhaeoP54_01671 ba3ea3fbecdf17f862fef6d68cef2f5a 556 Pfam PF04748 Divergent polysaccharide deacetylase 353 547 2.3E-28 T 14-10-2018 IPR006837 Divergent polysaccharide deacetylase PhaeoP54_01305 e68a819566eaf124867a4def0db50a38 328 SUPERFAMILY SSF56281 43 317 5.63E-48 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like PhaeoP54_01305 e68a819566eaf124867a4def0db50a38 328 SMART SM00849 97 301 1.1E-17 T 14-10-2018 IPR001279 Metallo-beta-lactamase PhaeoP54_01305 e68a819566eaf124867a4def0db50a38 328 Pfam PF00753 Metallo-beta-lactamase superfamily 96 294 1.9E-24 T 14-10-2018 IPR001279 Metallo-beta-lactamase PhaeoP54_01305 e68a819566eaf124867a4def0db50a38 328 Gene3D G3DSA:3.60.15.10 37 327 2.7E-93 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like PhaeoP54_03860 27544609b34a7363ea1bf20d2d728523 217 Gene3D G3DSA:3.10.450.230 74 217 1.4E-24 T 14-10-2018 PhaeoP54_03860 27544609b34a7363ea1bf20d2d728523 217 SUPERFAMILY SSF54427 77 214 7.01E-32 T 14-10-2018 IPR032710 NTF2-like domain superfamily PhaeoP54_03860 27544609b34a7363ea1bf20d2d728523 217 Pfam PF04335 VirB8 protein 7 211 4.7E-42 T 14-10-2018 IPR007430 Bacterial virulence protein VirB8 GO:0016020 PhaeoP54_03201 a25701e4698a6fe4d44e38560859b13c 657 Gene3D G3DSA:3.40.50.12780 337 469 7.8E-29 T 14-10-2018 PhaeoP54_03201 a25701e4698a6fe4d44e38560859b13c 657 ProSitePatterns PS00455 Putative AMP-binding domain signature. 193 204 - T 14-10-2018 IPR020845 AMP-binding, conserved site PhaeoP54_03201 a25701e4698a6fe4d44e38560859b13c 657 Gene3D G3DSA:3.40.50.12780 3 326 9.4E-53 T 14-10-2018 PhaeoP54_03201 a25701e4698a6fe4d44e38560859b13c 657 SUPERFAMILY SSF56801 11 617 8.9E-108 T 14-10-2018 PhaeoP54_03201 a25701e4698a6fe4d44e38560859b13c 657 Pfam PF00501 AMP-binding enzyme 19 476 4.0E-88 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 PhaeoP54_01881 c8dc19185a2e92877c1d54fabe1c658f 383 Pfam PF03739 Predicted permease YjgP/YjgQ family 6 357 2.2E-55 T 14-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 PhaeoP54_01881 c8dc19185a2e92877c1d54fabe1c658f 383 TIGRFAM TIGR04407 LptF_YjgP: LPS export ABC transporter permease LptF 4 357 1.2E-76 T 14-10-2018 IPR030922 LPS export ABC transporter permease LptF GO:0043190|GO:0055085 PhaeoP54_01754 406b664d7af6c1f107de6bcb72b15787 373 SUPERFAMILY SSF51419 9 232 1.66E-28 T 14-10-2018 IPR029066 PLP-binding barrel PhaeoP54_01754 406b664d7af6c1f107de6bcb72b15787 373 Pfam PF01168 Alanine racemase, N-terminal domain 8 225 1.1E-21 T 14-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 PhaeoP54_01754 406b664d7af6c1f107de6bcb72b15787 373 Gene3D G3DSA:3.20.20.10 10 224 1.2E-24 T 14-10-2018 IPR029066 PLP-binding barrel PhaeoP54_00399 c2310abf14c50d885ceb1f0ea6f26f43 285 Pfam PF06007 Phosphonate metabolism protein PhnJ 3 272 4.6E-142 T 14-10-2018 IPR010306 Alpha-D-ribose 1-methylphosphonate 5-phosphate C-P-lyase GO:0016829|GO:0019700|GO:0051539 KEGG: 00440+4.7.1.1|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 PhaeoP54_00399 c2310abf14c50d885ceb1f0ea6f26f43 285 PIRSF PIRSF011468 1 283 9.4E-152 T 14-10-2018 IPR010306 Alpha-D-ribose 1-methylphosphonate 5-phosphate C-P-lyase GO:0016829|GO:0019700|GO:0051539 KEGG: 00440+4.7.1.1|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 PhaeoP54_01590 8989bbd409eff1b190635cc6172b4098 98 Pfam PF13769 Virulence factor 7 92 2.1E-31 T 14-10-2018 IPR025989 Virulence factor domain PhaeoP54_03677 aee0e98320e63ba572032bcd437ff6ba 347 Gene3D G3DSA:1.10.3720.10 112 344 8.4E-11 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_03677 aee0e98320e63ba572032bcd437ff6ba 347 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 144 346 1.3E-26 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PhaeoP54_03677 aee0e98320e63ba572032bcd437ff6ba 347 SUPERFAMILY SSF161098 120 336 8.72E-10 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_01219 165d1359d57a58b9a5c84d56acc8c9ed 156 Gene3D G3DSA:3.40.30.10 41 134 2.4E-28 T 14-10-2018 PhaeoP54_01219 165d1359d57a58b9a5c84d56acc8c9ed 156 SUPERFAMILY SSF52833 39 132 1.56E-8 T 14-10-2018 IPR036249 Thioredoxin-like superfamily PhaeoP54_01919 908ea661322f7abf434d18b79843de78 123 Pfam PF07087 Protein of unknown function (DUF1353) 32 108 9.0E-7 T 14-10-2018 IPR010767 Campylobacter phage CGC-2007, Cje0229 PhaeoP54_00425 18b09fe5cda0ddd6de93777861ef55c8 282 Gene3D G3DSA:3.90.850.10 67 282 2.5E-86 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 PhaeoP54_00425 18b09fe5cda0ddd6de93777861ef55c8 282 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 73 278 3.3E-73 T 14-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 PhaeoP54_00425 18b09fe5cda0ddd6de93777861ef55c8 282 SUPERFAMILY SSF56529 62 279 1.03E-82 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 PhaeoP54_00644 8c9b8e8700464546dfeffa2682174cc6 640 SUPERFAMILY SSF53474 345 633 8.03E-29 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold PhaeoP54_00644 8c9b8e8700464546dfeffa2682174cc6 640 Gene3D G3DSA:3.40.50.1820 345 637 1.4E-29 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold PhaeoP54_00644 8c9b8e8700464546dfeffa2682174cc6 640 Pfam PF12146 Serine aminopeptidase, S33 369 599 1.3E-8 T 14-10-2018 IPR022742 Serine aminopeptidase, S33 PhaeoP54_00414 ef06d6ddc8dfba99edc8790be14159d3 384 SUPERFAMILY SSF161098 171 369 1.83E-25 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_00414 ef06d6ddc8dfba99edc8790be14159d3 384 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 194 381 4.9E-32 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PhaeoP54_00414 ef06d6ddc8dfba99edc8790be14159d3 384 Gene3D G3DSA:1.10.3720.10 165 380 3.4E-24 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_00414 ef06d6ddc8dfba99edc8790be14159d3 384 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 34 84 1.8E-5 T 14-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain PhaeoP54_00190 c87737306671fecd090904405d34ea68 261 Hamap MF_00943 Maleate isomerase [maiA]. 8 253 47.653 T 14-10-2018 IPR028615 Maleate isomerase GO:0050076 KEGG: 00650+5.2.1.1|KEGG: 00760+5.2.1.1|MetaCyc: PWY-5033|MetaCyc: PWY-6993|MetaCyc: PWY-7128|MetaCyc: PWY-722 PhaeoP54_00190 c87737306671fecd090904405d34ea68 261 PIRSF PIRSF015736 2 253 8.0E-54 T 14-10-2018 IPR026286 Maleate isomerase/Arylmalonate decarboxylase PhaeoP54_00190 c87737306671fecd090904405d34ea68 261 Gene3D G3DSA:3.40.50.12500 8 255 1.4E-73 T 14-10-2018 PhaeoP54_00546 d4f84d9cb05198e101b2f90557ed10e1 113 ProSitePatterns PS00018 EF-hand calcium-binding domain. 51 63 - T 14-10-2018 IPR018247 EF-Hand 1, calcium-binding site PhaeoP54_01253 cf5d62eb856aea6ba6c7c736b92c779a 149 Pfam PF04273 Putative phosphatase (DUF442) 4 109 2.0E-35 T 14-10-2018 IPR005939 Beta-lactamase hydrolase-like GO:0016787 PhaeoP54_01253 cf5d62eb856aea6ba6c7c736b92c779a 149 SUPERFAMILY SSF52821 5 106 8.78E-6 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily PhaeoP54_01253 cf5d62eb856aea6ba6c7c736b92c779a 149 Gene3D G3DSA:3.90.190.10 1 138 1.8E-38 T 14-10-2018 IPR029021 Protein-tyrosine phosphatase-like PhaeoP54_01253 cf5d62eb856aea6ba6c7c736b92c779a 149 TIGRFAM TIGR01244 TIGR01244: TIGR01244 family protein 4 135 1.5E-41 T 14-10-2018 IPR005939 Beta-lactamase hydrolase-like GO:0016787 PhaeoP54_03506 c27b30b16c4b9fd783af9266efde172e 289 TIGRFAM TIGR03818 MotA1: flagellar motor stator protein MotA 1 282 5.2E-108 T 14-10-2018 IPR022522 Flagellar motor stator, MotA PhaeoP54_03506 c27b30b16c4b9fd783af9266efde172e 289 Pfam PF01618 MotA/TolQ/ExbB proton channel family 130 234 1.6E-12 T 14-10-2018 IPR002898 MotA/TolQ/ExbB proton channel PhaeoP54_03506 c27b30b16c4b9fd783af9266efde172e 289 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 206 223 - T 14-10-2018 IPR000540 Flagellar motor protein MotA, conserved site PhaeoP54_01732 29fba4e98497eac6208707d9f8cd3019 395 Pfam PF07690 Major Facilitator Superfamily 26 260 2.2E-12 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PhaeoP54_01732 29fba4e98497eac6208707d9f8cd3019 395 SUPERFAMILY SSF103473 10 390 7.59E-35 T 14-10-2018 IPR036259 MFS transporter superfamily PhaeoP54_01732 29fba4e98497eac6208707d9f8cd3019 395 Gene3D G3DSA:1.20.1250.20 6 387 8.7E-28 T 14-10-2018 PhaeoP54_02124 7cf06fe44dde5d500dc538a66d5ef9d5 148 Gene3D G3DSA:3.50.80.10 1 148 1.1E-55 T 14-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily PhaeoP54_02124 7cf06fe44dde5d500dc538a66d5ef9d5 148 SUPERFAMILY SSF69500 1 145 6.15E-55 T 14-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily PhaeoP54_02124 7cf06fe44dde5d500dc538a66d5ef9d5 148 TIGRFAM TIGR00256 TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase 1 145 3.8E-55 T 14-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 PhaeoP54_02124 7cf06fe44dde5d500dc538a66d5ef9d5 148 Hamap MF_00518 D-aminoacyl-tRNA deacylase [dtd]. 1 145 34.393 T 14-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 PhaeoP54_02124 7cf06fe44dde5d500dc538a66d5ef9d5 148 Pfam PF02580 D-Tyr-tRNA(Tyr) deacylase 2 144 1.9E-54 T 14-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 PhaeoP54_02013 09fdd90a5747d653b6c75d4b399c6da4 178 Pfam PF07681 DoxX 26 120 8.4E-6 T 14-10-2018 IPR032808 DoxX family PhaeoP54_01091 adfeeee551ca5e38701736966e939e27 460 Pfam PF05036 Sporulation related domain 383 457 4.1E-10 T 14-10-2018 IPR007730 Sporulation-like domain GO:0042834 PhaeoP54_00436 15e5316890c4f64ca632caed27009a33 263 PIRSF PIRSF000094 2 261 1.3E-103 T 14-10-2018 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 PhaeoP54_00436 15e5316890c4f64ca632caed27009a33 263 Gene3D G3DSA:3.40.50.720 3 262 3.6E-58 T 14-10-2018 PhaeoP54_00436 15e5316890c4f64ca632caed27009a33 263 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 253 1.9E-83 T 14-10-2018 PhaeoP54_00436 15e5316890c4f64ca632caed27009a33 263 SUPERFAMILY SSF51735 7 257 5.27E-66 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PhaeoP54_02965 80974d1841cf81a1d18cdc094d0b03c5 297 Pfam PF02653 Branched-chain amino acid transport system / permease component 9 269 1.2E-42 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 PhaeoP54_01832 c4d47d0d85aa7df3bcdf7218f199f973 227 Gene3D G3DSA:1.10.150.20 1 59 6.2E-14 T 14-10-2018 PhaeoP54_01832 c4d47d0d85aa7df3bcdf7218f199f973 227 SUPERFAMILY SSF47794 4 58 1.3E-9 T 14-10-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 PhaeoP54_01832 c4d47d0d85aa7df3bcdf7218f199f973 227 Pfam PF14520 Helix-hairpin-helix domain 5 57 1.5E-12 T 14-10-2018 PhaeoP54_00025 a4e8778d73a79f392a095eac671c6826 332 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 55 308 1.1E-35 T 14-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 PhaeoP54_00025 a4e8778d73a79f392a095eac671c6826 332 Gene3D G3DSA:3.40.190.170 24 332 1.0E-62 T 14-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily PhaeoP54_00057 2f5751c42c1a0ea45bb7446dfc49f3fa 157 Pfam PF00583 Acetyltransferase (GNAT) family 37 94 1.2E-4 T 14-10-2018 IPR000182 GNAT domain PhaeoP54_00057 2f5751c42c1a0ea45bb7446dfc49f3fa 157 Gene3D G3DSA:3.40.630.30 8 123 2.9E-7 T 14-10-2018 PhaeoP54_00057 2f5751c42c1a0ea45bb7446dfc49f3fa 157 SUPERFAMILY SSF55729 8 120 3.9E-10 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase PhaeoP54_03987 a45aa7b561f36efa4be19d8ef5c6db90 96 Pfam PF04956 TrbC/VIRB2 family 4 93 4.1E-21 T 14-10-2018 IPR007039 Conjugal transfer TrbC/type IV secretion VirB2 PhaeoP54_02488 b7946a061d725c3373854af8e4521157 260 Pfam PF00005 ABC transporter 22 170 7.4E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PhaeoP54_02488 b7946a061d725c3373854af8e4521157 260 SMART SM00382 31 219 4.7E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_02488 b7946a061d725c3373854af8e4521157 260 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PhaeoP54_02488 b7946a061d725c3373854af8e4521157 260 Gene3D G3DSA:3.40.50.300 6 257 2.9E-66 T 14-10-2018 PhaeoP54_02488 b7946a061d725c3373854af8e4521157 260 SUPERFAMILY SSF52540 7 233 1.17E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_02485 799e3a8e4f04c83e3853162eadf7acf1 344 SUPERFAMILY SSF53807 33 314 2.59E-48 T 14-10-2018 PhaeoP54_02485 799e3a8e4f04c83e3853162eadf7acf1 344 Pfam PF01497 Periplasmic binding protein 58 292 7.0E-23 T 14-10-2018 IPR002491 ABC transporter periplasmic binding domain PhaeoP54_02485 799e3a8e4f04c83e3853162eadf7acf1 344 Gene3D G3DSA:3.40.50.1980 31 169 2.3E-37 T 14-10-2018 PhaeoP54_02485 799e3a8e4f04c83e3853162eadf7acf1 344 Gene3D G3DSA:3.40.50.1980 173 324 3.3E-30 T 14-10-2018 PhaeoP54_02156 6902d47d5d9ba648c6e84ccfaade8c8b 118 Pfam PF11367 Protein of unknown function (DUF3168) 25 95 1.5E-7 T 14-10-2018 IPR021508 Tail completion protein PhaeoP54_03339 dacad530a8d67edbb95bef34f3f7932b 518 SUPERFAMILY SSF161098 279 510 1.96E-26 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_03339 dacad530a8d67edbb95bef34f3f7932b 518 SUPERFAMILY SSF161098 12 255 7.85E-34 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_03339 dacad530a8d67edbb95bef34f3f7932b 518 Gene3D G3DSA:1.10.3720.10 280 516 4.0E-21 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_03339 dacad530a8d67edbb95bef34f3f7932b 518 Gene3D G3DSA:1.10.3720.10 14 261 1.8E-33 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_01574 768002c62a0044fa5c1479ed6b148286 412 Gene3D G3DSA:2.120.10.30 72 412 1.9E-105 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like PhaeoP54_01574 768002c62a0044fa5c1479ed6b148286 412 Pfam PF07995 Glucose / Sorbosone dehydrogenase 87 409 3.9E-120 T 14-10-2018 IPR012938 Glucose/Sorbosone dehydrogenase PhaeoP54_01574 768002c62a0044fa5c1479ed6b148286 412 SUPERFAMILY SSF50952 78 411 5.62E-45 T 14-10-2018 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 PhaeoP54_03159 0616d137477d1d6734c62752c66a2804 231 Pfam PF07298 NnrU protein 8 228 9.4E-42 T 14-10-2018 IPR009915 NnrU domain PhaeoP54_03806 d3dcc9573c4d5af0daeb374d8e60fc86 259 SMART SM00062 30 255 4.7E-47 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PhaeoP54_03806 d3dcc9573c4d5af0daeb374d8e60fc86 259 Gene3D G3DSA:3.40.190.10 36 251 4.3E-66 T 14-10-2018 PhaeoP54_03806 d3dcc9573c4d5af0daeb374d8e60fc86 259 Gene3D G3DSA:3.40.190.10 115 212 4.3E-66 T 14-10-2018 PhaeoP54_03806 d3dcc9573c4d5af0daeb374d8e60fc86 259 SUPERFAMILY SSF53850 10 255 7.15E-61 T 14-10-2018 PhaeoP54_03806 d3dcc9573c4d5af0daeb374d8e60fc86 259 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 30 253 7.0E-57 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PhaeoP54_02590 9e621091bd2c216b6190a6365ca438a9 115 SUPERFAMILY SSF55298 6 114 4.56E-32 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 PhaeoP54_02590 9e621091bd2c216b6190a6365ca438a9 115 Gene3D G3DSA:3.30.1330.40 1 115 8.6E-42 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 PhaeoP54_02590 9e621091bd2c216b6190a6365ca438a9 115 Pfam PF01042 Endoribonuclease L-PSP 13 114 6.5E-23 T 14-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 PhaeoP54_00860 02b8abe71ed45c7a076d3cbd7d2fe706 430 Pfam PF05159 Capsule polysaccharide biosynthesis protein 80 389 3.4E-54 T 14-10-2018 IPR007833 Capsule polysaccharide biosynthesis GO:0000271|GO:0015774 PhaeoP54_03607 d8738492373a39ea95bc231df230af8a 238 Pfam PF03591 AzlC protein 22 160 7.6E-33 T 14-10-2018 IPR011606 Branched-chain amino acid transport, permease PhaeoP54_03649 040674c86e4c827fccb9cec259627aa5 219 SUPERFAMILY SSF159270 43 214 5.62E-44 T 14-10-2018 IPR023373 YmcC-like superfamily PhaeoP54_03649 040674c86e4c827fccb9cec259627aa5 219 Pfam PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF 23 214 2.1E-40 T 14-10-2018 IPR021308 Group 4 capsule polysaccharide formation lipoprotein GfcB PhaeoP54_03649 040674c86e4c827fccb9cec259627aa5 219 Gene3D G3DSA:2.40.360.10 34 217 2.0E-17 T 14-10-2018 IPR023373 YmcC-like superfamily PhaeoP54_03167 c67e7a2493cba3f0f9e6609cbfaa9465 524 SUPERFAMILY SSF161098 329 513 1.7E-36 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_03167 c67e7a2493cba3f0f9e6609cbfaa9465 524 Gene3D G3DSA:1.10.3720.10 327 516 2.6E-31 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_03167 c67e7a2493cba3f0f9e6609cbfaa9465 524 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 352 514 2.9E-24 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PhaeoP54_03209 3b4f6901fa5307c760771c41925a3403 107 Pfam PF12616 Protein of unknown function (DUF3775) 24 95 1.5E-29 T 14-10-2018 IPR022254 Protein of unknown function DUF3775 PhaeoP54_02967 cf065c6d0f7333eb7117d91fc2b451e8 212 Pfam PF00857 Isochorismatase family 14 203 5.5E-30 T 14-10-2018 IPR000868 Isochorismatase-like GO:0003824 PhaeoP54_02967 cf065c6d0f7333eb7117d91fc2b451e8 212 Gene3D G3DSA:3.40.50.850 3 212 5.9E-47 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 PhaeoP54_02967 cf065c6d0f7333eb7117d91fc2b451e8 212 SUPERFAMILY SSF52499 7 210 3.92E-42 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 PhaeoP54_00502 f131f9efaaadcd67b30894c00ee6f7fb 856 Gene3D G3DSA:3.40.50.1110 7 274 1.0E-12 T 14-10-2018 IPR036514 SGNH hydrolase superfamily PhaeoP54_03403 478518a8c9e7cd557cc43f8eafc8fa71 281 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 68 233 7.0E-22 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain PhaeoP54_03403 478518a8c9e7cd557cc43f8eafc8fa71 281 Gene3D G3DSA:3.40.190.10 38 243 1.8E-31 T 14-10-2018 PhaeoP54_03403 478518a8c9e7cd557cc43f8eafc8fa71 281 SUPERFAMILY SSF53850 28 234 3.26E-34 T 14-10-2018 PhaeoP54_01958 6a2d740fff5f80a919de1bf1c206de62 90 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 23 80 1.0E-6 T 14-10-2018 PhaeoP54_01958 6a2d740fff5f80a919de1bf1c206de62 90 Pfam PF14145 YrhK-like protein 23 75 9.3E-19 T 14-10-2018 IPR025424 YrhK domain PhaeoP54_01108 882ad5ba1ae9e1e95324871e66e1158d 161 Gene3D G3DSA:2.170.150.70 8 120 3.9E-10 T 14-10-2018 PhaeoP54_01108 882ad5ba1ae9e1e95324871e66e1158d 161 SUPERFAMILY SSF51316 6 125 1.67E-33 T 14-10-2018 IPR011057 Mss4-like superfamily PhaeoP54_01108 882ad5ba1ae9e1e95324871e66e1158d 161 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 30 116 1.1E-15 T 14-10-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 PhaeoP54_03797 16787d47f1156e7e6e6f65934b44e8fa 310 Gene3D G3DSA:3.40.190.10 59 277 2.6E-31 T 14-10-2018 PhaeoP54_03797 16787d47f1156e7e6e6f65934b44e8fa 310 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 59 297 1.6E-42 T 14-10-2018 PhaeoP54_03797 16787d47f1156e7e6e6f65934b44e8fa 310 SUPERFAMILY SSF53850 84 264 8.3E-21 T 14-10-2018 PhaeoP54_03797 16787d47f1156e7e6e6f65934b44e8fa 310 Gene3D G3DSA:3.40.190.10 148 250 2.6E-31 T 14-10-2018 PhaeoP54_02680 48fad7305136ea6f6dc1b7777d94de30 234 Gene3D G3DSA:1.10.3720.10 4 232 9.6E-29 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_02680 48fad7305136ea6f6dc1b7777d94de30 234 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 45 226 6.9E-10 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PhaeoP54_02680 48fad7305136ea6f6dc1b7777d94de30 234 SUPERFAMILY SSF161098 6 225 1.16E-32 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_00822 c52e4af23490dd149bede3a195b968b6 159 Pfam PF13801 Heavy-metal resistance 20 140 1.4E-13 T 14-10-2018 IPR025961 Heavy-metal resistance protein PhaeoP54_00840 507a95103c646a6f4cab004f0ce65ec7 186 Pfam PF07811 TadE-like protein 26 68 1.0E-11 T 14-10-2018 IPR012495 TadE-like PhaeoP54_01217 de1ccdb1913073b92b4cee79d3ae838e 356 Pfam PF04143 Sulphur transport 33 343 1.2E-56 T 14-10-2018 IPR007272 Sulphur transport domain PhaeoP54_01770 066cea4d77b19fee40ff0f0bfbca7ad1 85 Pfam PF09550 Phage tail assembly chaperone protein, TAC 15 71 1.5E-24 T 14-10-2018 IPR019056 Phage tail assembly chaperone protein, TAC6 PhaeoP54_01770 066cea4d77b19fee40ff0f0bfbca7ad1 85 TIGRFAM TIGR02216 phage_TIGR02216: phage conserved hypothetical protein 14 70 8.3E-28 T 14-10-2018 IPR011739 Gene transfer agent, rcc01693 PhaeoP54_02249 cddabd4058030eaf5e92e02621f0499a 221 SUPERFAMILY SSF63862 126 203 3.53E-8 T 14-10-2018 IPR036371 Thiamin pyrophosphokinase, thiamin-binding domain superfamily GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 PhaeoP54_02249 cddabd4058030eaf5e92e02621f0499a 221 TIGRFAM TIGR01378 thi_PPkinase: thiamine pyrophosphokinase 28 197 1.6E-26 T 14-10-2018 IPR006282 Thiamin pyrophosphokinase GO:0004788|GO:0006772 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 PhaeoP54_02249 cddabd4058030eaf5e92e02621f0499a 221 SUPERFAMILY SSF63999 12 130 1.09E-25 T 14-10-2018 IPR036759 Thiamin pyrophosphokinase, catalytic domain superfamily GO:0004788|GO:0005524|GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 PhaeoP54_02249 cddabd4058030eaf5e92e02621f0499a 221 Gene3D G3DSA:3.40.50.10240 6 205 2.4E-31 T 14-10-2018 IPR036759 Thiamin pyrophosphokinase, catalytic domain superfamily GO:0004788|GO:0005524|GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 PhaeoP54_02249 cddabd4058030eaf5e92e02621f0499a 221 Pfam PF04263 Thiamin pyrophosphokinase, catalytic domain 29 121 2.5E-14 T 14-10-2018 IPR007371 Thiamin pyrophosphokinase, catalytic domain GO:0004788|GO:0005524|GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 PhaeoP54_03292 7f4595f9b616c35bf71511a2a9f0b794 388 Pfam PF00487 Fatty acid desaturase 111 334 4.7E-32 T 14-10-2018 IPR005804 Fatty acid desaturase domain GO:0006629 PhaeoP54_01200 76fa594a5ea62e72d0b72dedf8f4a7ff 374 SMART SM00450 24 153 1.3E-9 T 14-10-2018 IPR001763 Rhodanese-like domain PhaeoP54_01200 76fa594a5ea62e72d0b72dedf8f4a7ff 374 TIGRFAM TIGR03167 tRNA_sel_U_synt: tRNA 2-selenouridine synthase 38 336 2.6E-104 T 14-10-2018 IPR017582 tRNA 2-selenouridine/geranyl-2-thiouridine synthase GO:0016785|GO:0043828|GO:0070329 PhaeoP54_01200 76fa594a5ea62e72d0b72dedf8f4a7ff 374 Gene3D G3DSA:3.40.250.10 23 154 9.4E-38 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily PhaeoP54_01200 76fa594a5ea62e72d0b72dedf8f4a7ff 374 SUPERFAMILY SSF52821 21 153 2.1E-23 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily PhaeoP54_01200 76fa594a5ea62e72d0b72dedf8f4a7ff 374 Pfam PF00581 Rhodanese-like domain 29 148 1.4E-7 T 14-10-2018 IPR001763 Rhodanese-like domain PhaeoP54_01246 a8a93be44a9b998939cf4d1951138a29 340 Pfam PF02653 Branched-chain amino acid transport system / permease component 8 323 2.5E-35 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 PhaeoP54_03130 ba77724225d8b7a1122794a0b410f308 292 Gene3D G3DSA:3.40.190.290 91 286 6.4E-30 T 14-10-2018 PhaeoP54_03130 ba77724225d8b7a1122794a0b410f308 292 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 63 4.4E-15 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PhaeoP54_03130 ba77724225d8b7a1122794a0b410f308 292 SUPERFAMILY SSF46785 3 108 3.73E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PhaeoP54_03130 ba77724225d8b7a1122794a0b410f308 292 Gene3D G3DSA:1.10.10.10 3 87 3.2E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PhaeoP54_03130 ba77724225d8b7a1122794a0b410f308 292 Pfam PF03466 LysR substrate binding domain 89 287 2.1E-30 T 14-10-2018 IPR005119 LysR, substrate-binding PhaeoP54_03130 ba77724225d8b7a1122794a0b410f308 292 SUPERFAMILY SSF53850 90 290 4.65E-34 T 14-10-2018 PhaeoP54_00981 ab63f18ca6d9de9418060ccc87bba453 335 SUPERFAMILY SSF161098 108 319 1.44E-18 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_00981 ab63f18ca6d9de9418060ccc87bba453 335 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 131 334 6.4E-38 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PhaeoP54_00981 ab63f18ca6d9de9418060ccc87bba453 335 Gene3D G3DSA:1.10.3720.10 101 326 1.1E-23 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_00992 310412a242e3f3f2adc0031ba5e79451 248 Pfam PF08713 DNA alkylation repair enzyme 10 232 2.7E-62 T 14-10-2018 IPR014825 DNA alkylation repair enzyme PhaeoP54_00992 310412a242e3f3f2adc0031ba5e79451 248 Gene3D G3DSA:1.25.10.90 4 244 8.0E-44 T 14-10-2018 PhaeoP54_00992 310412a242e3f3f2adc0031ba5e79451 248 SUPERFAMILY SSF48371 13 232 3.94E-51 T 14-10-2018 IPR016024 Armadillo-type fold PhaeoP54_01158 1a6e5f9d59db1b8420a4abaf21229ad3 326 Pfam PF13704 Glycosyl transferase family 2 10 108 7.3E-19 T 14-10-2018 PhaeoP54_00897 93228a9886602d9cce5205f561584130 83 SUPERFAMILY SSF142921 3 76 4.05E-8 T 14-10-2018 IPR036930 WGR domain superfamily PhaeoP54_00897 93228a9886602d9cce5205f561584130 83 Pfam PF05406 WGR domain 2 75 9.1E-7 T 14-10-2018 IPR008893 WGR domain PhaeoP54_02674 d74c75329bf409a2f0a95e8a1cfa3b9a 260 SUPERFAMILY SSF46626 147 252 7.25E-7 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PhaeoP54_03957 c7234f4de3129a0b1060923225384c8e 117 Pfam PF03640 Secreted repeat of unknown function 29 60 2.2E-10 T 14-10-2018 IPR005297 Lipoprotein repeat PhaeoP54_03957 c7234f4de3129a0b1060923225384c8e 117 Pfam PF03640 Secreted repeat of unknown function 76 116 2.2E-17 T 14-10-2018 IPR005297 Lipoprotein repeat PhaeoP54_03957 c7234f4de3129a0b1060923225384c8e 117 PIRSF PIRSF029720 2 117 4.7E-38 T 14-10-2018 IPR014558 Uncharacterised conserved lipoprotein PhaeoP54_03638 00bd8633818173cae34ffeb798e3acf3 91 Pfam PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH 1 64 6.4E-7 T 14-10-2018 IPR022789 Antitoxin ParD PhaeoP54_03638 00bd8633818173cae34ffeb798e3acf3 91 TIGRFAM TIGR02606 antidote_CC2985: putative addiction module antidote protein, CC2985 family 6 68 2.3E-13 T 14-10-2018 IPR022789 Antitoxin ParD PhaeoP54_03638 00bd8633818173cae34ffeb798e3acf3 91 Gene3D G3DSA:1.10.8.1250 11 88 3.7E-8 T 14-10-2018 IPR038296 Antitoxin ParD superfamily PhaeoP54_01404 8cbd3b443175b09055fd276248feed05 263 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 214 240 - T 14-10-2018 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7817 PhaeoP54_01404 8cbd3b443175b09055fd276248feed05 263 Pfam PF01148 Cytidylyltransferase family 13 255 6.4E-48 T 14-10-2018 PhaeoP54_03885 80aa607997c019e8ad5e24bb24a23e5b 261 Pfam PF02535 ZIP Zinc transporter 106 255 2.5E-26 T 14-10-2018 IPR003689 Zinc/iron permease GO:0016020|GO:0030001|GO:0046873|GO:0055085 PhaeoP54_01255 65f3ec25053ff30d467f1957bb6038ac 142 Pfam PF04143 Sulphur transport 81 129 3.8E-9 T 14-10-2018 IPR007272 Sulphur transport domain PhaeoP54_02029 9a48b717cf2a9c4ba2f6c8187893d36e 312 SUPERFAMILY SSF56925 128 278 6.04E-7 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel PhaeoP54_02029 9a48b717cf2a9c4ba2f6c8187893d36e 312 Gene3D G3DSA:2.40.160.90 141 297 1.9E-8 T 14-10-2018 PhaeoP54_03661 359d9b21d070b40557185b6e7db8ee22 135 Gene3D G3DSA:3.30.565.10 16 133 1.1E-15 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PhaeoP54_03661 359d9b21d070b40557185b6e7db8ee22 135 SUPERFAMILY SSF55874 38 131 4.98E-15 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PhaeoP54_03661 359d9b21d070b40557185b6e7db8ee22 135 Pfam PF13581 Histidine kinase-like ATPase domain 19 131 4.6E-11 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PhaeoP54_00423 b50e746b07f1095e3640084239a8adc5 130 Pfam PF11750 Protein of unknown function (DUF3307) 11 120 9.4E-13 T 14-10-2018 IPR021737 Bacteriophage phiKZ, Orf197 PhaeoP54_02209 1dd55403a1ed942ac8505d0843037cc3 260 SUPERFAMILY SSF52540 7 176 2.02E-5 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_03894 f1f26abf32fafa2f3007ce17349f3846 260 SMART SM00382 31 226 1.8E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain PhaeoP54_03894 f1f26abf32fafa2f3007ce17349f3846 260 Pfam PF00005 ABC transporter 22 176 5.9E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PhaeoP54_03894 f1f26abf32fafa2f3007ce17349f3846 260 SUPERFAMILY SSF52540 4 239 1.24E-55 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_03894 f1f26abf32fafa2f3007ce17349f3846 260 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PhaeoP54_03894 f1f26abf32fafa2f3007ce17349f3846 260 Gene3D G3DSA:3.40.50.300 2 250 3.6E-61 T 14-10-2018 PhaeoP54_01153 d5cafcbf5968b36d6fb3e555cf28589f 258 SUPERFAMILY SSF144091 11 213 4.05E-45 T 14-10-2018 PhaeoP54_01153 d5cafcbf5968b36d6fb3e555cf28589f 258 Pfam PF01694 Rhomboid family 61 212 4.6E-36 T 14-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 PhaeoP54_01153 d5cafcbf5968b36d6fb3e555cf28589f 258 Gene3D G3DSA:1.20.1540.10 9 213 3.2E-32 T 14-10-2018 IPR035952 Rhomboid-like superfamily PhaeoP54_03324 abd7fcfe740ed70b28aa1af279233d5d 501 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 13 490 2.4E-82 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit PhaeoP54_00805 197ad87e050ab63bc702841a871be41c 133 SUPERFAMILY SSF52821 10 129 7.46E-26 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily PhaeoP54_00805 197ad87e050ab63bc702841a871be41c 133 Gene3D G3DSA:3.40.250.10 1 132 2.2E-34 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily PhaeoP54_00805 197ad87e050ab63bc702841a871be41c 133 Pfam PF00581 Rhodanese-like domain 25 123 3.1E-13 T 14-10-2018 IPR001763 Rhodanese-like domain PhaeoP54_00805 197ad87e050ab63bc702841a871be41c 133 SMART SM00450 23 127 2.2E-13 T 14-10-2018 IPR001763 Rhodanese-like domain PhaeoP54_01210 449abb7a1535f7e6f0f6c083a159de8c 636 Pfam PF13506 Glycosyl transferase family 21 199 376 5.5E-10 T 14-10-2018 IPR025993 Ceramide glucosyltransferase GO:0016757 KEGG: 00600+2.4.1.80|MetaCyc: PWY-5129|MetaCyc: PWY-7836|MetaCyc: PWY-7838|MetaCyc: PWY-7839|MetaCyc: PWY-7841|Reactome: R-HSA-1660662 PhaeoP54_01210 449abb7a1535f7e6f0f6c083a159de8c 636 SUPERFAMILY SSF53448 127 414 1.8E-24 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PhaeoP54_01210 449abb7a1535f7e6f0f6c083a159de8c 636 Gene3D G3DSA:3.90.550.10 124 358 3.4E-11 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PhaeoP54_03009 47f9f39a3d51cec4ced58c00977d4c98 71 Pfam PF06568 Domain of unknown function (DUF1127) 27 60 2.8E-13 T 14-10-2018 IPR009506 Protein of unknown function DUF1127 PhaeoP54_01279 02abad5db534ea7feb060d1ac1bb0688 122 Pfam PF13488 Glycine zipper 57 99 3.2E-8 T 14-10-2018 IPR039567 Glycine zipper domain PhaeoP54_03962 7c279d723506edd84c94f9ad9a673608 411 Pfam PF11800 Replication protein C C-terminal region 180 406 9.0E-22 T 14-10-2018 IPR021760 Replication protein-C C-terminal PhaeoP54_04044 1e2f852eea00909f63d9ccb4f8ed7851 432 SUPERFAMILY SSF52540 9 179 3.13E-6 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_03136 c345b8197638977ee871b681c5cf85ab 181 Gene3D G3DSA:3.40.630.30 1 168 7.0E-39 T 14-10-2018 PhaeoP54_03136 c345b8197638977ee871b681c5cf85ab 181 SUPERFAMILY SSF55729 4 158 4.21E-35 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase PhaeoP54_03136 c345b8197638977ee871b681c5cf85ab 181 Pfam PF13302 Acetyltransferase (GNAT) domain 12 147 1.6E-23 T 14-10-2018 IPR000182 GNAT domain PhaeoP54_03084 5e8731580d1d9a4fffd2fb9773f3bc09 262 Pfam PF01925 Sulfite exporter TauE/SafE 24 255 1.3E-26 T 14-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 PhaeoP54_01077 60ec112d0fb16d29b69b0b809bc3a41d 211 Pfam PF06197 Protein of unknown function (DUF998) 19 203 4.6E-18 T 14-10-2018 IPR009339 Protein of unknown function DUF998 PhaeoP54_02037 9f0ab002f9f43b21fefe43d018202269 288 SUPERFAMILY SSF51069 146 279 3.66E-7 T 14-10-2018 IPR036398 Alpha carbonic anhydrase domain superfamily PhaeoP54_02164 6072adc30bea5abb9315f6d5d774ee49 555 Gene3D G3DSA:3.40.50.300 53 245 2.2E-15 T 14-10-2018 PhaeoP54_02164 6072adc30bea5abb9315f6d5d774ee49 555 Pfam PF03354 Phage Terminase 78 544 2.2E-194 T 14-10-2018 IPR005021 Terminase large subunit, Lambdalikevirus-type PhaeoP54_03791 f4e8c9d2a458db21d41064692053c3d8 433 Gene3D G3DSA:3.50.50.60 30 381 8.7E-68 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PhaeoP54_03791 f4e8c9d2a458db21d41064692053c3d8 433 Pfam PF01266 FAD dependent oxidoreductase 30 380 4.6E-45 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 PhaeoP54_03791 f4e8c9d2a458db21d41064692053c3d8 433 Gene3D G3DSA:3.30.9.10 123 344 8.7E-68 T 14-10-2018 PhaeoP54_03791 f4e8c9d2a458db21d41064692053c3d8 433 SUPERFAMILY SSF51905 29 318 3.11E-43 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PhaeoP54_01212 bdab2cc5022de6efc193453b78e4eb37 423 PIRSF PIRSF028704 10 423 2.3E-69 T 14-10-2018 IPR014550 Uncharacterised conserved protein UCP028704, OpgC PhaeoP54_01212 bdab2cc5022de6efc193453b78e4eb37 423 Pfam PF10129 OpgC protein 35 415 6.2E-101 T 14-10-2018 IPR014550 Uncharacterised conserved protein UCP028704, OpgC PhaeoP54_02357 e886de966e5ed661d1459d22d4b70541 300 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 10 296 18.387 T 14-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 PhaeoP54_02357 e886de966e5ed661d1459d22d4b70541 300 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 23 290 4.7E-72 T 14-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 PhaeoP54_02357 e886de966e5ed661d1459d22d4b70541 300 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 6 292 1.4E-68 T 14-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 PhaeoP54_03875 758b1b6822649867580ab9872b72811b 244 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 12 222 6.2E-52 T 14-10-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 PhaeoP54_03562 51b1a243726849141167f4e679afaa70 127 Pfam PF07007 Lysozyme inhibitor LprI 24 122 4.1E-16 T 14-10-2018 IPR009739 Lysozyme inhibitor LprI, N-terminal PhaeoP54_03562 51b1a243726849141167f4e679afaa70 127 Gene3D G3DSA:1.20.1270.180 16 126 1.9E-12 T 14-10-2018 PhaeoP54_02287 eee8f5bab0d3b9f70bdd61611400e1a1 171 Pfam PF03831 PhnA domain 104 171 2.0E-28 T 14-10-2018 IPR013988 PhnA protein, C-terminal PhaeoP54_02287 eee8f5bab0d3b9f70bdd61611400e1a1 171 Gene3D G3DSA:2.30.30.40 101 171 5.2E-30 T 14-10-2018 PhaeoP54_02287 eee8f5bab0d3b9f70bdd61611400e1a1 171 SUPERFAMILY SSF82057 102 170 1.42E-22 T 14-10-2018 PhaeoP54_02060 863061bce3ce64838f3213b16051612a 331 SUPERFAMILY SSF56219 1 328 4.89E-37 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily PhaeoP54_02060 863061bce3ce64838f3213b16051612a 331 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 4 287 1.3E-7 T 14-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase PhaeoP54_02060 863061bce3ce64838f3213b16051612a 331 Gene3D G3DSA:3.60.10.10 1 331 4.4E-22 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily PhaeoP54_02900 2318efba10f6def145b5ccc647aa6c41 156 PIRSF PIRSF011386 2 156 5.5E-39 T 14-10-2018 IPR018037 Nitrogen fixation protein FixH, Proteobacterial PhaeoP54_02900 2318efba10f6def145b5ccc647aa6c41 156 Pfam PF05751 FixH 8 150 1.2E-37 T 14-10-2018 IPR008620 Nitrogen fixation protein FixH PhaeoP54_00695 a3e38bfd80c3f5b32d7f62e5725e8469 373 Pfam PF02653 Branched-chain amino acid transport system / permease component 57 359 7.2E-55 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 PhaeoP54_00340 a112dbd20320f15c586c139e6c881ee9 67 Pfam PF08410 Domain of unknown function (DUF1737) 1 53 2.0E-27 T 14-10-2018 IPR013619 Domain of unknown function DUF1737 PhaeoP54_01686 f7caffb8c28c53a31bc1c5e146ddd225 203 Pfam PF11351 Holin of 3TMs, for gene-transfer release 15 128 4.1E-30 T 14-10-2018 IPR021497 Holin of 3TMs, for gene-transfer release PhaeoP54_00111 9e2c4978a5c73a3d626936a21905f5eb 182 Gene3D G3DSA:1.20.120.10 55 174 6.4E-21 T 14-10-2018 PhaeoP54_00111 9e2c4978a5c73a3d626936a21905f5eb 182 SUPERFAMILY SSF47175 56 174 3.53E-26 T 14-10-2018 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 PhaeoP54_00111 9e2c4978a5c73a3d626936a21905f5eb 182 Pfam PF01322 Cytochrome C' 59 173 7.2E-21 T 14-10-2018 IPR002321 Cytochrome c, class II GO:0005506|GO:0009055|GO:0020037 PhaeoP54_03940 cbbd9b4aa282dd4ea48f6fe4914f816f 519 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 71 115 1.0E-8 T 14-10-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PhaeoP54_03940 cbbd9b4aa282dd4ea48f6fe4914f816f 519 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 240 266 5.5E-23 T 14-10-2018 PhaeoP54_03940 cbbd9b4aa282dd4ea48f6fe4914f816f 519 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 307 319 5.5E-23 T 14-10-2018 PhaeoP54_03940 cbbd9b4aa282dd4ea48f6fe4914f816f 519 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 80 105 5.5E-23 T 14-10-2018 PhaeoP54_03940 cbbd9b4aa282dd4ea48f6fe4914f816f 519 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 218 239 5.5E-23 T 14-10-2018 PhaeoP54_03940 cbbd9b4aa282dd4ea48f6fe4914f816f 519 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 155 176 5.5E-23 T 14-10-2018 PhaeoP54_03940 cbbd9b4aa282dd4ea48f6fe4914f816f 519 Pfam PF00361 Proton-conducting membrane transporter 131 346 9.9E-40 T 14-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PhaeoP54_02981 0ebaa3c9669e1ebd8efed93ae3877672 190 Pfam PF12915 Protein of unknown function (DUF3833) 27 189 6.8E-63 T 14-10-2018 IPR024409 Protein of unknown function DUF3833 PhaeoP54_02867 ea96ac4043226d394afc05a59b71a7e5 252 Pfam PF04654 Protein of unknown function, DUF599 17 222 2.9E-54 T 14-10-2018 IPR006747 Protein of unknown function DUF599 PhaeoP54_01076 677ebeec19917ec4828497e7f0acda84 120 SUPERFAMILY SSF47413 60 105 1.54E-8 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 PhaeoP54_01076 677ebeec19917ec4828497e7f0acda84 120 Gene3D G3DSA:1.10.260.40 58 119 6.7E-17 T 14-10-2018 PhaeoP54_02232 d8143ecd31e848dca981fba6134150f1 293 Pfam PF01062 Bestrophin, RFP-TM, chloride channel 2 266 3.5E-54 T 14-10-2018 IPR021134 Bestrophin/UPF0187 Reactome: R-HSA-2672351 PhaeoP54_00999 550ecf080b5ec71457d358f38fadf5e4 200 Gene3D G3DSA:2.40.160.20 24 200 1.0E-51 T 14-10-2018 PhaeoP54_00999 550ecf080b5ec71457d358f38fadf5e4 200 SUPERFAMILY SSF56925 25 200 9.68E-27 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel PhaeoP54_00999 550ecf080b5ec71457d358f38fadf5e4 200 Pfam PF03922 OmpW family 26 200 3.5E-41 T 14-10-2018 IPR005618 Outer membrane protein, OmpW GO:0019867 PhaeoP54_00118 50a49f4db7d3288fe0e2579ae9a291b3 384 Pfam PF11294 Protein of unknown function (DUF3095) 6 376 2.0E-140 T 14-10-2018 IPR021445 Protein of unknown function DUF3095 PhaeoP54_03697 8129e79f9d006f5c1c8cbeaad729ed68 188 Pfam PF13274 Protein of unknown function (DUF4065) 30 137 2.3E-20 T 14-10-2018 IPR025272 Domain of unknown function DUF4065 PhaeoP54_00230 a105a9160b012d2d7df53a20eb45e1ec 361 Pfam PF02653 Branched-chain amino acid transport system / permease component 48 318 8.3E-33 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 PhaeoP54_03544 d656296b06abfdaf00aa7c8fe13ff9b2 136 SUPERFAMILY SSF46458 1 128 3.16E-28 T 14-10-2018 IPR009050 Globin-like superfamily PhaeoP54_03544 d656296b06abfdaf00aa7c8fe13ff9b2 136 Pfam PF00042 Globin 6 96 1.3E-8 T 14-10-2018 IPR000971 Globin GO:0020037 PhaeoP54_03544 d656296b06abfdaf00aa7c8fe13ff9b2 136 Gene3D G3DSA:1.10.490.10 3 130 3.5E-28 T 14-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 PhaeoP54_01581 77c8bdbd0bc6577d9f0416e2b676743a 213 Pfam PF06776 Invasion associated locus B (IalB) protein 72 206 2.8E-35 T 14-10-2018 IPR010642 Invasion protein B PhaeoP54_01581 77c8bdbd0bc6577d9f0416e2b676743a 213 Gene3D G3DSA:2.60.40.1880 68 213 1.3E-28 T 14-10-2018 IPR038696 Invasion protein B superfamily PhaeoP54_00124 b7a184421b92c8d166620c7a51b0aa62 343 Pfam PF02653 Branched-chain amino acid transport system / permease component 51 329 2.6E-33 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 PhaeoP54_00632 273126b2d911c907c5e0ceeabc781054 230 Pfam PF13398 Peptidase M50B-like 15 211 4.1E-42 T 14-10-2018 PhaeoP54_00072 9b743113b7dca256512b0b3fe752d9f4 210 Hamap MF_02088 Probable queuosine precursor transporter. 2 210 15.439 T 14-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 PhaeoP54_00072 9b743113b7dca256512b0b3fe752d9f4 210 Pfam PF02592 Putative vitamin uptake transporter 32 198 2.4E-32 T 14-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 PhaeoP54_00072 9b743113b7dca256512b0b3fe752d9f4 210 TIGRFAM TIGR00697 TIGR00697: conserved hypothetical integral membrane protein 13 198 1.0E-25 T 14-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 PhaeoP54_01874 ecdf34a2c5d146856c233d7abf908bfc 174 Pfam PF13430 Domain of unknown function (DUF4112) 12 114 6.0E-33 T 14-10-2018 IPR025187 Protein of unknown function DUF4112 PhaeoP54_03773 f9e31b90d930f5f8989d85942f0de156 223 Pfam PF10986 Protein of unknown function (DUF2796) 25 134 4.2E-27 T 14-10-2018 IPR021253 Protein of unknown function DUF2796 PhaeoP54_03773 f9e31b90d930f5f8989d85942f0de156 223 Pfam PF10986 Protein of unknown function (DUF2796) 131 216 2.7E-17 T 14-10-2018 IPR021253 Protein of unknown function DUF2796 PhaeoP54_02084 c96df64525f76c7be291cebd52ca7029 364 Pfam PF06282 Protein of unknown function (DUF1036) 33 132 1.1E-26 T 14-10-2018 IPR009380 Protein of unknown function DUF1036 PhaeoP54_00369 bb0de3b0a9b5da0ba004f243ec0652f3 154 Gene3D G3DSA:3.40.630.30 10 153 5.3E-27 T 14-10-2018 PhaeoP54_00369 bb0de3b0a9b5da0ba004f243ec0652f3 154 SUPERFAMILY SSF55729 9 147 3.66E-20 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase PhaeoP54_00369 bb0de3b0a9b5da0ba004f243ec0652f3 154 Pfam PF00583 Acetyltransferase (GNAT) family 61 120 1.7E-9 T 14-10-2018 IPR000182 GNAT domain PhaeoP54_00561 84a6931e5151a9dfef0327684c390517 231 Hamap MF_02202 Tol-Pal system protein TolQ [tolQ]. 14 231 37.548 T 14-10-2018 IPR014163 Tol-Pal system, TolQ GO:0016021|GO:0043213 PhaeoP54_00561 84a6931e5151a9dfef0327684c390517 231 TIGRFAM TIGR02796 tolQ: protein TolQ 15 227 1.3E-82 T 14-10-2018 IPR014163 Tol-Pal system, TolQ GO:0016021|GO:0043213 PhaeoP54_00561 84a6931e5151a9dfef0327684c390517 231 Pfam PF01618 MotA/TolQ/ExbB proton channel family 86 215 7.0E-41 T 14-10-2018 IPR002898 MotA/TolQ/ExbB proton channel PhaeoP54_02848 55cabae80d7895c97c9554e23a476765 215 Pfam PF07509 Protein of unknown function (DUF1523) 1 176 7.8E-75 T 14-10-2018 IPR011088 Bacteriophage phiNM3, A0EWY4 PhaeoP54_00216 aa259a17c1f90abc0b23a166664000a9 1225 Gene3D G3DSA:2.60.40.10 555 648 8.1E-17 T 14-10-2018 IPR013783 Immunoglobulin-like fold PhaeoP54_00216 aa259a17c1f90abc0b23a166664000a9 1225 Gene3D G3DSA:2.60.40.10 651 745 1.0E-15 T 14-10-2018 IPR013783 Immunoglobulin-like fold PhaeoP54_00216 aa259a17c1f90abc0b23a166664000a9 1225 Gene3D G3DSA:2.60.40.10 361 456 5.0E-14 T 14-10-2018 IPR013783 Immunoglobulin-like fold PhaeoP54_00216 aa259a17c1f90abc0b23a166664000a9 1225 Gene3D G3DSA:2.60.40.10 846 940 2.3E-13 T 14-10-2018 IPR013783 Immunoglobulin-like fold PhaeoP54_00216 aa259a17c1f90abc0b23a166664000a9 1225 Gene3D G3DSA:2.60.40.10 266 360 1.8E-14 T 14-10-2018 IPR013783 Immunoglobulin-like fold PhaeoP54_00216 aa259a17c1f90abc0b23a166664000a9 1225 Gene3D G3DSA:2.60.40.10 457 552 4.2E-16 T 14-10-2018 IPR013783 Immunoglobulin-like fold PhaeoP54_00216 aa259a17c1f90abc0b23a166664000a9 1225 Gene3D G3DSA:2.60.40.10 946 1037 3.7E-17 T 14-10-2018 IPR013783 Immunoglobulin-like fold PhaeoP54_00216 aa259a17c1f90abc0b23a166664000a9 1225 Gene3D G3DSA:2.60.40.10 747 842 2.6E-19 T 14-10-2018 IPR013783 Immunoglobulin-like fold PhaeoP54_00216 aa259a17c1f90abc0b23a166664000a9 1225 Gene3D G3DSA:2.60.40.10 174 260 1.5E-8 T 14-10-2018 IPR013783 Immunoglobulin-like fold PhaeoP54_03532 2cf3310ddb1cc3bdc4f96a29d68844bc 566 Pfam PF02485 Core-2/I-Branching enzyme 33 248 2.4E-15 T 14-10-2018 IPR003406 Glycosyl transferase, family 14 GO:0008375|GO:0016020 PhaeoP54_02430 08d7c925c1f2d3d4d54f05088e87e394 298 SUPERFAMILY SSF56634 3 296 1.44E-54 T 14-10-2018 IPR020835 Catalase superfamily GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 PhaeoP54_02430 08d7c925c1f2d3d4d54f05088e87e394 298 Gene3D G3DSA:2.40.180.20 28 279 1.1E-67 T 14-10-2018 PhaeoP54_02430 08d7c925c1f2d3d4d54f05088e87e394 298 Gene3D G3DSA:1.20.1280.120 7 293 1.1E-67 T 14-10-2018 PhaeoP54_02430 08d7c925c1f2d3d4d54f05088e87e394 298 Pfam PF00199 Catalase 21 290 5.7E-15 T 14-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 PhaeoP54_00721 ec6c4a228cb27ba66c77f5c18b77c3fc 252 TIGRFAM TIGR00317 cobS: cobalamin 5'-phosphate synthase 15 247 8.6E-34 T 14-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 PhaeoP54_00721 ec6c4a228cb27ba66c77f5c18b77c3fc 252 Hamap MF_00719 Adenosylcobinamide-GDP ribazoletransferase [cobS]. 1 252 46.039 T 14-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 PhaeoP54_00721 ec6c4a228cb27ba66c77f5c18b77c3fc 252 Pfam PF02654 Cobalamin-5-phosphate synthase 15 245 3.5E-48 T 14-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 PhaeoP54_03308 c53eaddd340c1377cd3a8c2f04763dc9 314 Pfam PF01774 UreD urease accessory protein 95 293 1.2E-43 T 14-10-2018 IPR002669 Urease accessory protein UreD GO:0006807|GO:0016151 PhaeoP54_03308 c53eaddd340c1377cd3a8c2f04763dc9 314 Hamap MF_01384 Urease accessory protein UreD [ureD]. 54 304 23.504 T 14-10-2018 IPR002669 Urease accessory protein UreD GO:0006807|GO:0016151 PhaeoP54_03988 9ce6de70aaeca24d6497c73263de0ddd 92 Pfam PF05101 Type IV secretory pathway, VirB3-like protein 4 85 9.1E-19 T 14-10-2018 IPR007792 Type IV secretion system, VirB3 / TrbD / AvhB PhaeoP54_01865 f06e0b7ad6ccea65b69a9c76d988364c 55 Pfam PF10617 Protein of unknown function (DUF2474) 26 50 1.0E-7 T 14-10-2018 IPR018895 Protein of unknown function DUF2474 PhaeoP54_01146 6643981da9d16dd9f0caf11bc5f3027b 395 SUPERFAMILY SSF53474 27 136 1.45E-6 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold PhaeoP54_01146 6643981da9d16dd9f0caf11bc5f3027b 395 Pfam PF09994 Uncharacterized alpha/beta hydrolase domain (DUF2235) 36 318 3.3E-61 T 14-10-2018 IPR018712 Domain of unknown function DUF2235 PhaeoP54_03771 7c0103c88ac1f20d705f85355236a865 757 Pfam PF13704 Glycosyl transferase family 2 397 497 1.7E-21 T 14-10-2018 PhaeoP54_03771 7c0103c88ac1f20d705f85355236a865 757 SUPERFAMILY SSF53448 389 562 6.0E-7 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PhaeoP54_03186 a683986f80b0a6efd1311af8658246cb 286 Pfam PF05013 N-formylglutamate amidohydrolase 17 248 2.9E-69 T 14-10-2018 IPR007709 N-formylglutamate amidohydrolase PhaeoP54_03186 a683986f80b0a6efd1311af8658246cb 286 SUPERFAMILY SSF53187 6 275 6.91E-86 T 14-10-2018 PhaeoP54_03186 a683986f80b0a6efd1311af8658246cb 286 Gene3D G3DSA:3.40.630.40 2 279 1.4E-95 T 14-10-2018 PhaeoP54_02503 d3fe554f66a6b6b8bb08f582f9df8337 309 Pfam PF03690 Uncharacterised protein family (UPF0160) 6 300 2.2E-69 T 14-10-2018 IPR003226 Metal-dependent protein hydrolase PhaeoP54_00292 68f600e5e4f3297bf2c472194ef9deb4 241 Pfam PF03591 AzlC protein 19 163 1.0E-33 T 14-10-2018 IPR011606 Branched-chain amino acid transport, permease PhaeoP54_00815 2a16a1c8f75a7960b8fda72befb36507 318 Pfam PF00487 Fatty acid desaturase 54 289 2.3E-30 T 14-10-2018 IPR005804 Fatty acid desaturase domain GO:0006629 PhaeoP54_01196 804536936b36fd4ddc0222ecdc322a3b 112 Gene3D G3DSA:3.20.170.20 1 112 1.4E-31 T 14-10-2018 PhaeoP54_01196 804536936b36fd4ddc0222ecdc322a3b 112 SUPERFAMILY SSF56399 2 106 2.45E-35 T 14-10-2018 PhaeoP54_01196 804536936b36fd4ddc0222ecdc322a3b 112 Pfam PF06108 Protein of unknown function (DUF952) 7 94 1.3E-26 T 14-10-2018 IPR009297 Protein of unknown function DUF952 PhaeoP54_02491 37a4f018f966f7ca90726621c649d3d5 125 Pfam PF02472 Biopolymer transport protein ExbD/TolR 13 124 1.4E-14 T 14-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 PhaeoP54_00004 9fcb5fe2e1d4924e820080a7a5cf07e9 206 Pfam PF01810 LysE type translocator 17 202 2.3E-26 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 PhaeoP54_00978 5b830e598c91e7f0b2cc3875344ccf5d 426 Pfam PF11902 Protein of unknown function (DUF3422) 5 425 6.5E-154 T 14-10-2018 IPR021830 Protein of unknown function DUF3422 PhaeoP54_03556 10d2cc97393a3e4af6a0a00cbdd3d7dc 252 Pfam PF01925 Sulfite exporter TauE/SafE 13 247 7.4E-36 T 14-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 PhaeoP54_00406 d4e1a51c3e5597b96d6e32f34b174f06 252 SUPERFAMILY SSF88713 33 249 1.81E-10 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 PhaeoP54_00406 d4e1a51c3e5597b96d6e32f34b174f06 252 Gene3D G3DSA:3.20.20.370 6 249 6.7E-10 T 14-10-2018 PhaeoP54_01776 d0e71f5ad5bfb36d850a707390a57461 394 TIGRFAM TIGR01554 major_cap_HK97: phage major capsid protein, HK97 family 36 391 3.6E-106 T 14-10-2018 IPR024455 Phage capsid PhaeoP54_01776 d0e71f5ad5bfb36d850a707390a57461 394 Pfam PF05065 Phage capsid family 109 391 1.5E-81 T 14-10-2018 IPR024455 Phage capsid PhaeoP54_01776 d0e71f5ad5bfb36d850a707390a57461 394 SUPERFAMILY SSF56563 101 391 2.75E-76 T 14-10-2018 PhaeoP54_01203 bf621365042e23f81831bb7f0be3602f 89 Pfam PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) 31 82 5.0E-20 T 14-10-2018 IPR007208 Na(+)/H(+) antiporter subunit F-like GO:0015075|GO:0016021|GO:0034220 PhaeoP54_01203 bf621365042e23f81831bb7f0be3602f 89 PIRSF PIRSF028784 1 89 1.7E-25 T 14-10-2018 IPR007208 Na(+)/H(+) antiporter subunit F-like GO:0015075|GO:0016021|GO:0034220 PhaeoP54_00289 94d315e93e90b135b62009d2bafa635f 44 SUPERFAMILY SSF81469 2 43 2.22E-15 T 14-10-2018 IPR036596 Bacterial aa3 type cytochrome c oxidase subunit IV superfamily KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 PhaeoP54_00289 94d315e93e90b135b62009d2bafa635f 44 Gene3D G3DSA:1.20.5.160 2 44 1.2E-16 T 14-10-2018 IPR036596 Bacterial aa3 type cytochrome c oxidase subunit IV superfamily KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 PhaeoP54_00289 94d315e93e90b135b62009d2bafa635f 44 Pfam PF07835 Bacterial aa3 type cytochrome c oxidase subunit IV 4 43 8.3E-18 T 14-10-2018 IPR012422 Cytochrome c oxidase, subunit IV, bacterial aa3 type KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 PhaeoP54_01912 e95d32d261e4a274178570779d98adf1 301 Pfam PF01370 NAD dependent epimerase/dehydratase family 9 217 1.2E-25 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 PhaeoP54_01912 e95d32d261e4a274178570779d98adf1 301 SUPERFAMILY SSF51735 2 296 6.33E-44 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PhaeoP54_01912 e95d32d261e4a274178570779d98adf1 301 Gene3D G3DSA:3.40.50.720 1 299 7.0E-43 T 14-10-2018 PhaeoP54_03781 268b87a362df5f2ef1a6ef1ff72fb579 162 Gene3D G3DSA:2.40.50.180 40 149 1.1E-38 T 14-10-2018 PhaeoP54_03781 268b87a362df5f2ef1a6ef1ff72fb579 162 SUPERFAMILY SSF50341 19 156 1.83E-36 T 14-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 PhaeoP54_03781 268b87a362df5f2ef1a6ef1ff72fb579 162 Gene3D G3DSA:2.30.30.40 23 148 1.1E-38 T 14-10-2018 PhaeoP54_03781 268b87a362df5f2ef1a6ef1ff72fb579 162 Pfam PF01584 CheW-like domain 21 155 1.7E-36 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 PhaeoP54_03781 268b87a362df5f2ef1a6ef1ff72fb579 162 SMART SM00260 17 154 1.3E-37 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 PhaeoP54_02126 09eff281258fd6d6fd7262c591cdf60e 318 SUPERFAMILY SSF161098 95 302 6.15E-24 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_02126 09eff281258fd6d6fd7262c591cdf60e 318 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 116 315 2.5E-32 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PhaeoP54_02126 09eff281258fd6d6fd7262c591cdf60e 318 Gene3D G3DSA:1.10.3720.10 88 308 1.4E-27 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_03560 b129b2830faea5b75932321717b6f13e 332 Pfam PF06089 L-asparaginase II 9 326 1.7E-108 T 14-10-2018 IPR010349 L-asparaginase II PhaeoP54_00147 4c9daf2cd77dca287f336df578022d83 158 Pfam PF11164 Protein of unknown function (DUF2948) 14 156 1.9E-49 T 14-10-2018 IPR021335 Protein of unknown function DUF2948 PhaeoP54_02586 cd6a4fd8d0919f0bc754ae43e64b117b 141 SUPERFAMILY SSF52833 6 80 3.02E-6 T 14-10-2018 IPR036249 Thioredoxin-like superfamily PhaeoP54_02586 cd6a4fd8d0919f0bc754ae43e64b117b 141 Pfam PF07845 Protein of unknown function (DUF1636) 9 119 4.7E-30 T 14-10-2018 IPR012863 Protein of unknown function DUF1636 PhaeoP54_02586 cd6a4fd8d0919f0bc754ae43e64b117b 141 Gene3D G3DSA:3.40.30.10 5 90 1.2E-6 T 14-10-2018 PhaeoP54_00858 a2ac0fe161708327830b481dd7dba20b 676 Pfam PF05159 Capsule polysaccharide biosynthesis protein 52 151 1.7E-8 T 14-10-2018 IPR007833 Capsule polysaccharide biosynthesis GO:0000271|GO:0015774 PhaeoP54_00858 a2ac0fe161708327830b481dd7dba20b 676 Pfam PF05159 Capsule polysaccharide biosynthesis protein 161 305 5.3E-27 T 14-10-2018 IPR007833 Capsule polysaccharide biosynthesis GO:0000271|GO:0015774 PhaeoP54_00858 a2ac0fe161708327830b481dd7dba20b 676 Pfam PF05159 Capsule polysaccharide biosynthesis protein 398 628 1.5E-38 T 14-10-2018 IPR007833 Capsule polysaccharide biosynthesis GO:0000271|GO:0015774 PhaeoP54_00601 0f4f69ba8cc23976c6db2174e30758fd 224 Pfam PF02104 SURF1 family 16 205 1.2E-34 T 14-10-2018 IPR002994 Surfeit locus 1/Shy1 GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PhaeoP54_01653 d2c065791de78c960182d6b567b30097 283 Gene3D G3DSA:1.10.3720.10 5 274 5.4E-59 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_01653 d2c065791de78c960182d6b567b30097 283 SUPERFAMILY SSF161098 13 283 2.52E-70 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_01653 d2c065791de78c960182d6b567b30097 283 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 96 277 2.1E-21 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PhaeoP54_01718 109325f4c7049779a04f6e93cb3e450c 323 Pfam PF05661 Protein of unknown function (DUF808) 2 303 8.0E-124 T 14-10-2018 IPR008526 Inner membrane protein YedI PhaeoP54_01718 109325f4c7049779a04f6e93cb3e450c 323 PIRSF PIRSF016660 1 315 8.0E-109 T 14-10-2018 IPR008526 Inner membrane protein YedI PhaeoP54_02880 9b20c635780b5a12c8eefc7ee94e03c5 220 SUPERFAMILY SSF56436 27 200 6.28E-24 T 14-10-2018 IPR016187 C-type lectin fold PhaeoP54_02880 9b20c635780b5a12c8eefc7ee94e03c5 220 Gene3D G3DSA:3.10.100.10 38 200 1.3E-5 T 14-10-2018 IPR016186 C-type lectin-like/link domain superfamily PhaeoP54_02756 af72da9d1567069643be1e5a4e8016aa 126 SUPERFAMILY SSF54427 2 123 6.83E-31 T 14-10-2018 IPR032710 NTF2-like domain superfamily PhaeoP54_02756 af72da9d1567069643be1e5a4e8016aa 126 Pfam PF12893 Putative lumazine-binding 5 120 2.4E-30 T 14-10-2018 IPR039437 Putative lumazine-binding PhaeoP54_02756 af72da9d1567069643be1e5a4e8016aa 126 Gene3D G3DSA:3.10.450.50 1 121 3.3E-21 T 14-10-2018 PhaeoP54_03199 3f11afbc0bcc0f1b3c540785fc490657 328 Pfam PF02653 Branched-chain amino acid transport system / permease component 13 313 7.6E-21 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 PhaeoP54_01430 b9c63cd1f25e9cf4ffc9194cdc0e1863 77 Pfam PF06568 Domain of unknown function (DUF1127) 33 67 3.5E-11 T 14-10-2018 IPR009506 Protein of unknown function DUF1127 PhaeoP54_02915 573ede06c54a352436359445f5a47afb 155 SUPERFAMILY SSF55961 1 140 1.36E-11 T 14-10-2018 PhaeoP54_02915 573ede06c54a352436359445f5a47afb 155 Gene3D G3DSA:3.30.530.20 3 150 3.0E-10 T 14-10-2018 IPR023393 START-like domain superfamily PhaeoP54_00325 41bbbc393e6963cb2442827196150247 249 SUPERFAMILY SSF69593 14 228 6.54E-28 T 14-10-2018 PhaeoP54_00325 41bbbc393e6963cb2442827196150247 249 SMART SM00563 73 187 2.2E-24 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 PhaeoP54_00325 41bbbc393e6963cb2442827196150247 249 Pfam PF01553 Acyltransferase 68 182 2.2E-13 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 PhaeoP54_02056 062480349bbdd20510935ea03f6cde14 355 Pfam PF01594 AI-2E family transporter 14 332 2.7E-58 T 14-10-2018 IPR002549 Transmembrane protein TqsA-like PhaeoP54_02533 0ee2dca3606c469776f64e6fbeee4511 413 SUPERFAMILY SSF56935 71 385 9.15E-6 T 14-10-2018 PhaeoP54_01992 ccd14881fdc6cc4298d197f4ce557638 259 Gene3D G3DSA:1.20.5.1230 34 204 2.3E-7 T 14-10-2018 PhaeoP54_00024 77acff7acdc05bfe919424da642d5fca 192 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 34 169 5.7E-15 T 14-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ PhaeoP54_03086 f942e7277e4a69b911df8445a94acdf9 134 Pfam PF03724 META domain 34 128 1.2E-16 T 14-10-2018 IPR005184 Domain of unknown function DUF306, Meta/HslJ PhaeoP54_03086 f942e7277e4a69b911df8445a94acdf9 134 Gene3D G3DSA:2.40.128.270 35 132 7.6E-13 T 14-10-2018 IPR038670 HslJ-like superfamily PhaeoP54_01427 ef5dfb78ac37bc79df86084a226d0750 296 TIGRFAM TIGR00163 PS_decarb: phosphatidylserine decarboxylase 78 293 8.6E-37 T 14-10-2018 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 PhaeoP54_01427 ef5dfb78ac37bc79df86084a226d0750 296 Pfam PF02666 Phosphatidylserine decarboxylase 90 292 1.8E-51 T 14-10-2018 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 PhaeoP54_02298 39833e3692df1a582933b5cdc1975b2e 156 SUPERFAMILY SSF110087 3 142 5.75E-45 T 14-10-2018 IPR036182 Copper chaperone PCuAC superfamily PhaeoP54_02298 39833e3692df1a582933b5cdc1975b2e 156 Pfam PF04314 Copper chaperone PCu(A)C 27 137 1.4E-36 T 14-10-2018 IPR007410 Copper chaperone PCuAC PhaeoP54_02298 39833e3692df1a582933b5cdc1975b2e 156 Gene3D G3DSA:2.60.40.1890 31 146 1.7E-34 T 14-10-2018 IPR036182 Copper chaperone PCuAC superfamily PhaeoP54_03723 d2fe13191a93f9426db75d3a5c3c0bd1 103 Pfam PF13403 Hint domain 1 54 1.8E-17 T 14-10-2018 IPR028992 Hedgehog/Intein (Hint) domain PhaeoP54_01987 3096de6417f1d98147752475b36ae192 132 Pfam PF06073 Bacterial protein of unknown function (DUF934) 25 127 1.9E-26 T 14-10-2018 IPR008318 Uncharacterised conserved protein UCP030820 PhaeoP54_01892 774b3a58c89bd7b85bc29dc4550cee79 140 Pfam PF07386 Protein of unknown function (DUF1499) 31 134 7.5E-10 T 14-10-2018 IPR010865 Protein of unknown function DUF1499 PhaeoP54_00501 1a85fe44289e1a9a3b9b0e8d5f72bac5 280 Gene3D G3DSA:3.90.550.10 1 199 5.6E-22 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PhaeoP54_00501 1a85fe44289e1a9a3b9b0e8d5f72bac5 280 SUPERFAMILY SSF53448 4 161 1.41E-20 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PhaeoP54_00501 1a85fe44289e1a9a3b9b0e8d5f72bac5 280 Pfam PF00535 Glycosyl transferase family 2 6 139 5.7E-16 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 PhaeoP54_02088 9cef6b9f58e1cc0ed5052899719ad49e 306 SUPERFAMILY SSF52096 150 291 4.57E-9 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily PhaeoP54_02088 9cef6b9f58e1cc0ed5052899719ad49e 306 Gene3D G3DSA:3.90.226.10 149 285 1.2E-7 T 14-10-2018 PhaeoP54_00802 f99dcf660a05ada2362671443db2d1d1 303 Gene3D G3DSA:3.60.15.10 28 303 4.2E-43 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like PhaeoP54_00802 f99dcf660a05ada2362671443db2d1d1 303 SUPERFAMILY SSF56281 32 285 1.68E-18 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like PhaeoP54_00802 f99dcf660a05ada2362671443db2d1d1 303 Pfam PF13483 Beta-lactamase superfamily domain 32 265 4.4E-17 T 14-10-2018 PhaeoP54_01833 13d3269da2a954a7fee5417fc99e0997 374 Pfam PF00487 Fatty acid desaturase 80 327 7.0E-27 T 14-10-2018 IPR005804 Fatty acid desaturase domain GO:0006629 PhaeoP54_02904 29b8b7a1af9bea8ae4768762f9d0f6b8 65 Pfam PF05545 Cbb3-type cytochrome oxidase component FixQ 4 50 1.9E-21 T 14-10-2018 IPR008621 Cbb3-type cytochrome oxidase component PhaeoP54_03485 fe2fefcea9a88d4af816c0420c0657a8 90 Pfam PF03795 YCII-related domain 1 86 3.3E-18 T 14-10-2018 IPR005545 YCII-related PhaeoP54_03485 fe2fefcea9a88d4af816c0420c0657a8 90 Gene3D G3DSA:3.30.70.1060 1 89 5.0E-27 T 14-10-2018 PhaeoP54_03485 fe2fefcea9a88d4af816c0420c0657a8 90 SUPERFAMILY SSF54909 2 88 1.74E-20 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel PhaeoP54_00042 839623d416f9e6c4b9a3b583ffe07b7a 505 Pfam PF01970 Tripartite tricarboxylate transporter TctA family 18 435 4.0E-119 T 14-10-2018 IPR002823 Protein of unknown function DUF112, transmembrane PhaeoP54_00799 0d196d5a31b3cbf57924415b277a7226 72 Gene3D G3DSA:2.10.70.10 40 72 4.0E-8 T 14-10-2018 PhaeoP54_00799 0d196d5a31b3cbf57924415b277a7226 72 Pfam PF10636 Hemin uptake protein hemP 36 72 2.4E-15 T 14-10-2018 IPR019600 Hemin uptake protein HemP PhaeoP54_00157 7cf643f942bdf9c21a30ef3edf44294a 340 Pfam PF10150 Ribonuclease E/G family 210 330 1.7E-22 T 14-10-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 PhaeoP54_00157 7cf643f942bdf9c21a30ef3edf44294a 340 Pfam PF10150 Ribonuclease E/G family 101 196 1.0E-10 T 14-10-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 PhaeoP54_01607 0c8b46c46da573a273702a253085a2a1 96 SUPERFAMILY SSF54285 18 96 2.62E-11 T 14-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp PhaeoP54_01607 0c8b46c46da573a273702a253085a2a1 96 Pfam PF02597 ThiS family 24 96 4.9E-7 T 14-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 PhaeoP54_01607 0c8b46c46da573a273702a253085a2a1 96 Gene3D G3DSA:3.10.20.30 16 96 2.3E-11 T 14-10-2018 IPR012675 Beta-grasp domain superfamily PhaeoP54_00503 a06336c5331a500298ca251a1fcf74d4 300 Gene3D G3DSA:3.40.50.1110 31 296 3.9E-23 T 14-10-2018 IPR036514 SGNH hydrolase superfamily PhaeoP54_00614 89b7dd6b2eac88845380e4036557be72 259 Pfam PF12787 EcsC protein family 93 236 1.5E-23 T 14-10-2018 IPR024787 EcsC protein PhaeoP54_01056 661539464090d78f6c311b27098cbcc4 184 Pfam PF02674 Colicin V production protein 7 155 4.3E-27 T 14-10-2018 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 PhaeoP54_01829 ecfdcf06bf49a4bfd10b62166fba4c37 94 SMART SM01323 4 87 3.4E-44 T 14-10-2018 IPR003849 Preprotein translocase YajC PhaeoP54_01829 ecfdcf06bf49a4bfd10b62166fba4c37 94 PRINTS PR01853 Bacterial YajC preprotein translocase signature 6 26 9.5E-17 T 14-10-2018 IPR003849 Preprotein translocase YajC PhaeoP54_01829 ecfdcf06bf49a4bfd10b62166fba4c37 94 PRINTS PR01853 Bacterial YajC preprotein translocase signature 44 62 9.5E-17 T 14-10-2018 IPR003849 Preprotein translocase YajC PhaeoP54_01829 ecfdcf06bf49a4bfd10b62166fba4c37 94 Pfam PF02699 Preprotein translocase subunit 8 85 5.6E-30 T 14-10-2018 IPR003849 Preprotein translocase YajC PhaeoP54_01829 ecfdcf06bf49a4bfd10b62166fba4c37 94 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 6 87 1.2E-28 T 14-10-2018 IPR003849 Preprotein translocase YajC PhaeoP54_02594 8949cc22721287b29d65dc816baa878f 314 Pfam PF02653 Branched-chain amino acid transport system / permease component 17 291 4.2E-33 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 PhaeoP54_01449 2ffec03cc17c0c91be137072c43b2519 517 PIRSF PIRSF037567 1 516 9.9E-157 T 14-10-2018 IPR010426 Trimethylamine methyltransferase GO:0008168|GO:0015948 KEGG: 00680+2.1.1.250|MetaCyc: PWY-5250 PhaeoP54_01449 2ffec03cc17c0c91be137072c43b2519 517 Pfam PF06253 Trimethylamine methyltransferase (MTTB) 14 513 1.9E-224 T 14-10-2018 IPR010426 Trimethylamine methyltransferase GO:0008168|GO:0015948 KEGG: 00680+2.1.1.250|MetaCyc: PWY-5250 PhaeoP54_01449 2ffec03cc17c0c91be137072c43b2519 517 Gene3D G3DSA:3.20.20.480 30 517 4.7E-180 T 14-10-2018 IPR038601 MttB-like superfamily KEGG: 00680+2.1.1.250|MetaCyc: PWY-5250 PhaeoP54_01024 348aeb2a702554ef75015a8f4dad21df 515 TIGRFAM TIGR01972 NDH_I_M: proton-translocating NADH-quinone oxidoreductase, chain M 5 496 6.4E-184 T 14-10-2018 IPR010227 NADH-quinone oxidoreductase, chain M/4 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PhaeoP54_01024 348aeb2a702554ef75015a8f4dad21df 515 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 136 155 6.4E-48 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PhaeoP54_01024 348aeb2a702554ef75015a8f4dad21df 515 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 335 354 6.4E-48 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PhaeoP54_01024 348aeb2a702554ef75015a8f4dad21df 515 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 166 190 6.4E-48 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PhaeoP54_01024 348aeb2a702554ef75015a8f4dad21df 515 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 247 271 6.4E-48 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PhaeoP54_01024 348aeb2a702554ef75015a8f4dad21df 515 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 387 413 6.4E-48 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PhaeoP54_01024 348aeb2a702554ef75015a8f4dad21df 515 Pfam PF00361 Proton-conducting membrane transporter 130 429 1.7E-92 T 14-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PhaeoP54_01024 348aeb2a702554ef75015a8f4dad21df 515 Pfam PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus 72 125 5.2E-6 T 14-10-2018 IPR000260 NADH:ubiquinone oxidoreductase chain 4, N-terminal GO:0006120|GO:0055114 KEGG: 00190+1.6.5.3|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-5083|MetaCyc: PWY-6692|Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PhaeoP54_00041 c2b50332066b56da133e1b6663aed25b 179 Pfam PF07331 Tripartite tricarboxylate transporter TctB family 24 159 6.4E-13 T 14-10-2018 IPR009936 Protein of unknown function DUF1468 PhaeoP54_01206 f992fc9a016ea99bee3590bf21b2d51f 117 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 8 104 3.9E-22 T 14-10-2018 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like PhaeoP54_01984 f387ea1096006bb2a7140d82b90a1208 102 Pfam PF11011 Protein of unknown function (DUF2849) 8 92 4.2E-30 T 14-10-2018 IPR021270 Protein of unknown function DUF2849 PhaeoP54_03526 29d3b3a36bacf40fd9c8ce30659a8265 119 Pfam PF05130 FlgN protein 8 93 5.6E-8 T 14-10-2018 IPR007809 FlgN-like protein GO:0005515|GO:0044780 PhaeoP54_03526 29d3b3a36bacf40fd9c8ce30659a8265 119 SUPERFAMILY SSF140566 7 68 5.49E-8 T 14-10-2018 IPR036679 FlgN-like superfamily GO:0005515|GO:0044780 PhaeoP54_03526 29d3b3a36bacf40fd9c8ce30659a8265 119 Gene3D G3DSA:1.20.58.300 2 94 2.6E-6 T 14-10-2018 PhaeoP54_02708 5c67eab6862735d098dba0330da51c07 353 Pfam PF02653 Branched-chain amino acid transport system / permease component 71 342 2.5E-51 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 PhaeoP54_01916 01b9e270f0da99c44e83e0c57e0cee87 291 SUPERFAMILY SSF53448 2 137 3.26E-6 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PhaeoP54_01490 7c412e0aded5300a18ebc5c4824affe3 230 Pfam PF04367 Protein of unknown function (DUF502) 76 183 7.4E-34 T 14-10-2018 IPR007462 Protein of unknown function DUF502 PhaeoP54_01328 5544696b2cd27664f78503f2447e5f68 250 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 19 228 3.3E-59 T 14-10-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 PhaeoP54_01550 17fea24adc86cc87fa0b7ea4d73d024a 340 Pfam PF03060 Nitronate monooxygenase 102 319 1.0E-14 T 14-10-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 PhaeoP54_01550 17fea24adc86cc87fa0b7ea4d73d024a 340 Gene3D G3DSA:3.20.20.70 15 337 3.2E-54 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PhaeoP54_01550 17fea24adc86cc87fa0b7ea4d73d024a 340 SUPERFAMILY SSF51412 17 283 2.38E-53 T 14-10-2018 PhaeoP54_00499 59527fa5ed4d937765921786fccb4504 454 Pfam PF13440 Polysaccharide biosynthesis protein 41 331 1.9E-47 T 14-10-2018 PhaeoP54_01872 4e6e18ee615f353831b3fbe0869a47f7 109 Gene3D G3DSA:1.10.150.20 2 90 5.1E-12 T 14-10-2018 PhaeoP54_01872 4e6e18ee615f353831b3fbe0869a47f7 109 Pfam PF04994 TfoX C-terminal domain 5 80 2.3E-20 T 14-10-2018 IPR007077 TfoX, C-terminal PhaeoP54_01314 83c49f8651fa16b1d969728e95e3904e 240 Pfam PF07796 Protein of unknown function (DUF1638) 72 231 9.3E-39 T 14-10-2018 IPR012437 Domain of unknown function DUF1638 PhaeoP54_00824 623abf4bbd8178352190ee05fa33042c 94 Pfam PF12096 Protein of unknown function (DUF3572) 6 87 2.9E-33 T 14-10-2018 IPR021955 Protein of unknown function DUF3572 PhaeoP54_02685 3222899389240ef42c2312a81d8845cf 261 Gene3D G3DSA:3.40.50.150 1 165 3.5E-8 T 14-10-2018 PhaeoP54_02685 3222899389240ef42c2312a81d8845cf 261 SUPERFAMILY SSF53335 5 164 1.82E-9 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PhaeoP54_03847 f75e32c593177766b9771574f710b60f 193 SUPERFAMILY SSF46689 4 99 1.7E-5 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PhaeoP54_00199 605796987f71dfb1856697c578152484 265 Gene3D G3DSA:3.40.50.720 4 261 4.2E-45 T 14-10-2018 PhaeoP54_00199 605796987f71dfb1856697c578152484 265 SUPERFAMILY SSF51735 1 262 1.41E-42 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PhaeoP54_00199 605796987f71dfb1856697c578152484 265 Pfam PF16363 GDP-mannose 4,6 dehydratase 35 232 9.4E-24 T 14-10-2018 IPR016040 NAD(P)-binding domain PhaeoP54_00933 7fb6bd8318ecc9e34cda95a11732b218 84 Pfam PF10658 Protein of unknown function (DUF2484) 2 75 1.6E-22 T 14-10-2018 IPR018919 Protein of unknown function DUF2484 PhaeoP54_01706 82c98a6f9ed4e34354b169a62dd60528 311 Pfam PF02653 Branched-chain amino acid transport system / permease component 26 285 1.5E-35 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 PhaeoP54_01198 9a675a7ee66732a213c90303ec694807 102 Pfam PF09350 Domain of unknown function (DUF1992) 8 70 1.3E-14 T 14-10-2018 IPR018961 DnaJ homologue, subfamily C, member 28, conserved domain PhaeoP54_03275 41d202ac827e86065eaeed51f22b740f 162 Pfam PF12100 Domain of unknown function (DUF3576) 66 156 1.3E-24 T 14-10-2018 IPR021959 Protein of unknown function DUF3576 PhaeoP54_01121 cee2b81d7252c790cdc122569889977b 171 SUPERFAMILY SSF69118 33 156 2.22E-11 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 PhaeoP54_01121 cee2b81d7252c790cdc122569889977b 171 Gene3D G3DSA:1.20.1290.10 25 160 1.2E-7 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 PhaeoP54_03538 b753a773116141fbcc62180608c65b84 199 Pfam PF06835 Lipopolysaccharide-assembly, LptC-related 105 176 8.8E-5 T 14-10-2018 IPR010664 Lipopolysaccharide assembly, LptC-related PhaeoP54_02461 cae9d1a11e85f52f1b57a8f5eaba8935 282 SMART SM00850 191 282 8.3E-13 T 14-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 PhaeoP54_02461 cae9d1a11e85f52f1b57a8f5eaba8935 282 Pfam PF04397 LytTr DNA-binding domain 195 282 7.0E-16 T 14-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 PhaeoP54_03830 242234edbbfa5d064e5efbba3d35d8dd 242 Pfam PF05284 Protein of unknown function (DUF736) 129 214 3.3E-11 T 14-10-2018 IPR007948 Protein of unknown function DUF736 PhaeoP54_03830 242234edbbfa5d064e5efbba3d35d8dd 242 Pfam PF05284 Protein of unknown function (DUF736) 10 93 3.2E-10 T 14-10-2018 IPR007948 Protein of unknown function DUF736 PhaeoP54_01182 ffcc101e72ef3ac62b26aa86572253d9 229 Pfam PF13403 Hint domain 32 162 3.5E-16 T 14-10-2018 IPR028992 Hedgehog/Intein (Hint) domain PhaeoP54_02765 bdcd1e0e88bd7645faa36d4ec1de4ebb 251 Gene3D G3DSA:1.20.910.10 66 246 5.0E-22 T 14-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 PhaeoP54_02765 bdcd1e0e88bd7645faa36d4ec1de4ebb 251 SUPERFAMILY SSF48613 72 242 6.35E-13 T 14-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 PhaeoP54_02514 cbe41033e0b3cbd9865eda457a252507 85 Pfam PF13453 Transcription factor zinc-finger 2 42 5.3E-20 T 14-10-2018 IPR027392 Transcription factor zinc-finger PhaeoP54_01292 66dd37d0a5a7eef530ce83f43171373e 491 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 8 479 1.4E-111 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit PhaeoP54_03443 3e31dea164c30a49aad115a5e7481cb6 117 Pfam PF04304 Protein of unknown function (DUF454) 2 115 6.0E-38 T 14-10-2018 IPR007401 Protein of unknown function DUF454 PhaeoP54_03443 3e31dea164c30a49aad115a5e7481cb6 117 PIRSF PIRSF016789 1 117 1.4E-40 T 14-10-2018 IPR007401 Protein of unknown function DUF454 PhaeoP54_00321 a08d6b84220419c8de72e7e7b13b7cd7 937 Pfam PF13779 Domain of unknown function (DUF4175) 73 935 2.0E-261 T 14-10-2018 IPR012683 Conserved hypothetical protein CHP02302, transmembrane PhaeoP54_01707 a6b8b9527bc96a562b7c29b2f0272017 289 Pfam PF02653 Branched-chain amino acid transport system / permease component 7 273 3.5E-33 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 PhaeoP54_02793 0ae558b507ba06e5db147046f65e8df1 232 Gene3D G3DSA:3.40.50.150 6 232 6.4E-82 T 14-10-2018 PhaeoP54_02793 0ae558b507ba06e5db147046f65e8df1 232 Pfam PF05430 S-adenosyl-L-methionine-dependent methyltransferase 121 230 1.9E-39 T 14-10-2018 IPR008471 MnmC-like methyltransferase GO:0016645|GO:0055114 MetaCyc: PWY-7892 PhaeoP54_02793 0ae558b507ba06e5db147046f65e8df1 232 SUPERFAMILY SSF53335 50 202 3.06E-8 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PhaeoP54_00219 351b4e89f09032cc3e05069d40dbc456 502 Pfam PF04293 SpoVR like protein 16 456 1.2E-160 T 14-10-2018 IPR007390 Sporulation stage V, protein R PhaeoP54_02304 cd2c3715581e9d58978d35e16633b882 493 Pfam PF01384 Phosphate transporter family 78 481 3.3E-106 T 14-10-2018 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: R-HSA-427652 PhaeoP54_01927 8da119c106c0a55da82eec1091fecd93 785 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 495 774 1.6E-27 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit PhaeoP54_01927 8da119c106c0a55da82eec1091fecd93 785 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 111 233 5.4E-33 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit PhaeoP54_03232 fd82fa6ece8525e4b5d31025881e74fc 172 Pfam PF07799 Protein of unknown function (DUF1643) 24 156 1.6E-45 T 14-10-2018 IPR012441 Protein of unknown function DUF1643 PhaeoP54_03533 c009787aa41751cc0a78bb785f6a0cb7 476 SUPERFAMILY SSF52540 6 221 2.16E-30 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PhaeoP54_03533 c009787aa41751cc0a78bb785f6a0cb7 476 Gene3D G3DSA:3.40.50.300 6 223 1.0E-28 T 14-10-2018 PhaeoP54_02374 72a666dc11db1783634590c4d1df92de 272 SUPERFAMILY SSF53474 28 227 1.35E-22 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold PhaeoP54_00174 36b9b4bc93e7fd749e70727d09da87a3 137 SUPERFAMILY SSF54427 28 135 1.36E-5 T 14-10-2018 IPR032710 NTF2-like domain superfamily PhaeoP54_03382 9ad15059987b6c7eaf0324ac56a397ee 343 Pfam PF13704 Glycosyl transferase family 2 54 139 5.8E-23 T 14-10-2018 PhaeoP54_03354 e8a3336848ce013f3ee66f06d2149296 294 Gene3D G3DSA:3.40.50.720 1 281 3.3E-114 T 14-10-2018 PhaeoP54_03354 e8a3336848ce013f3ee66f06d2149296 294 SUPERFAMILY SSF51735 9 276 3.53E-38 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PhaeoP54_01976 b4a65fc1f3bf840ab32069eb71eef3d3 225 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 27 198 3.1E-22 T 14-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ PhaeoP54_02023 74b689c53897e62aa9298ed8501ad18e 97 Pfam PF07045 Domain of unknown function (DUF1330) 3 95 3.2E-35 T 14-10-2018 IPR010753 Domain of unknown function DUF1330 PhaeoP54_02023 74b689c53897e62aa9298ed8501ad18e 97 Gene3D G3DSA:3.30.70.100 1 96 3.4E-36 T 14-10-2018 PhaeoP54_02023 74b689c53897e62aa9298ed8501ad18e 97 SUPERFAMILY SSF54909 1 95 1.23E-33 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel PhaeoP54_02604 f7f9c50b1a8b90cc71dfbe2fac972fbe 136 Pfam PF07332 Putative Actinobacterial Holin-X, holin superfamily III 19 130 2.9E-24 T 14-10-2018 IPR009937 Putative Actinobacterial Holin-X, holin superfamily III PhaeoP54_02597 f933a29efc28631027c0df9c728a15a5 41 Pfam PF08085 Entericidin EcnA/B family 17 36 3.9E-7 T 14-10-2018 IPR012556 Entericidin A/B GO:0009636|GO:0016020 PhaeoP54_00123 c873c66156be182eb785e014321265a1 356 Pfam PF02653 Branched-chain amino acid transport system / permease component 42 339 4.1E-32 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 PhaeoP54_01812 aaaef9f25f3f1e477c4667045479f4b1 186 SUPERFAMILY SSF55811 49 178 1.76E-11 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 PhaeoP54_01812 aaaef9f25f3f1e477c4667045479f4b1 186 Gene3D G3DSA:3.90.79.10 7 183 1.0E-37 T 14-10-2018 PhaeoP54_03856 45146f07feb860501ed1a27e57755314 64 Pfam PF13783 Domain of unknown function (DUF4177) 4 46 1.1E-5 T 14-10-2018 IPR025234 Protein of unknown function DUF4177 PhaeoP54_03483 2d3bc31c852ebe364825451b9ec8c74a 131 Pfam PF08570 Protein of unknown function (DUF1761) 5 129 1.6E-28 T 14-10-2018 IPR013879 Protein of unknown function DUF1761 PhaeoP54_03503 bca823cb6a035b3b40a629cfaf361418 174 Pfam PF03748 Flagellar basal body-associated protein FliL 79 172 5.5E-12 T 14-10-2018 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 PhaeoP54_01528 1afbd2004aa9ac71ea8ddf51a2327126 426 SUPERFAMILY SSF101960 15 422 1.15E-92 T 14-10-2018 IPR037284 SUF system FeS cluster assembly, SufBD superfamily PhaeoP54_01528 1afbd2004aa9ac71ea8ddf51a2327126 426 Pfam PF01458 Uncharacterized protein family (UPF0051) 180 397 7.5E-59 T 14-10-2018 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 PhaeoP54_00077 f84ee59ea99fcce0e95d809c1b9175d1 95 Pfam PF02325 YGGT family 10 87 9.8E-15 T 14-10-2018 IPR003425 CCB3/YggT GO:0016020 PhaeoP54_02845 62568840693f1a6cdbde0d5d5a4bc173 155 Gene3D G3DSA:3.90.79.10 1 153 6.9E-19 T 14-10-2018 PhaeoP54_02845 62568840693f1a6cdbde0d5d5a4bc173 155 Pfam PF00293 NUDIX domain 40 130 8.2E-8 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 PhaeoP54_02845 62568840693f1a6cdbde0d5d5a4bc173 155 SUPERFAMILY SSF55811 3 130 3.66E-15 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 PhaeoP54_03467 8f716ae70c5ec1e5a35f23b669486dc7 115 Pfam PF09585 Conserved hypothetical protein (Lin0512_fam) 5 107 2.3E-33 T 14-10-2018 IPR011719 Conserved hypothetical protein CHP02058 PhaeoP54_03467 8f716ae70c5ec1e5a35f23b669486dc7 115 Gene3D G3DSA:3.30.1330.20 1 112 8.1E-30 T 14-10-2018 IPR037103 Tubulin/FtsZ, C-terminal domain superfamily Reactome: R-HSA-380320 PhaeoP54_01236 2500b6db2ca0ba800fd35a1d3a7d590e 172 Pfam PF05071 NADH ubiquinone oxidoreductase subunit NDUFA12 75 171 1.3E-22 T 14-10-2018 IPR007763 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 GO:0008137|GO:0009055|GO:0016020 Reactome: R-HSA-6799198 PhaeoP54_02721 3a7893bbdb80c809546224e9071698d2 358 Pfam PF02608 ABC transporter substrate-binding protein PnrA-like 26 305 1.3E-46 T 14-10-2018 IPR003760 ABC transporter substrate-binding protein PnrA-like GO:0005886 PhaeoP54_02721 3a7893bbdb80c809546224e9071698d2 358 Gene3D G3DSA:3.40.50.2300 131 348 1.4E-124 T 14-10-2018 PhaeoP54_02721 3a7893bbdb80c809546224e9071698d2 358 Gene3D G3DSA:3.40.50.2300 28 285 1.4E-124 T 14-10-2018 PhaeoP54_01612 3a41ad99866c0e1c37cc07074866c07d 352 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 131 350 1.5E-42 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PhaeoP54_01612 3a41ad99866c0e1c37cc07074866c07d 352 SUPERFAMILY SSF161098 109 338 2.75E-17 T 14-10-2018 IPR035906 MetI-like superfamily PhaeoP54_04034 70de5414a1189c66ee668d80865d58a5 337 Pfam PF10134 Replication initiator protein A 31 258 2.9E-98 T 14-10-2018 IPR018777 Replication initiator protein A PhaeoP54_03117 668fa6a9bd46ac6e8ce91b7ecb4a10cb 155 Pfam PF10722 Putative bacterial sensory transduction regulator 29 153 4.2E-19 T 14-10-2018 IPR019660 Putative sensory transduction regulator YbjN PhaeoP54_04031 e5f8d596c85ad7581db9dd882d4adf49 131 Pfam PF12599 Protein of unknown function (DUF3768) 44 130 2.4E-25 T 14-10-2018 IPR022243 Protein of unknown function DUF3768 PhaeoP54_01748 517a3a8566ef86140a27e94e32845b95 99 Pfam PF04977 Septum formation initiator 23 99 4.8E-13 T 14-10-2018 IPR007060 Septum formation initiator FtsL/DivIC PhaeoP54_02655 ee6a81d64cd7f42cbdb1d6ba214b6ff0 250 Pfam PF07103 Protein of unknown function (DUF1365) 9 243 7.6E-55 T 14-10-2018 IPR010775 Protein of unknown function DUF1365 PhaeoP54_01530 2d7558ce5d278028db5b273a1e7d87cc 193 Pfam PF04893 Yip1 domain 15 172 1.4E-10 T 14-10-2018 IPR006977 Yip1 domain GO:0016020 PhaeoP54_02946 ba9490b2c914b0d20b906d6b921bd268 205 Pfam PF01810 LysE type translocator 24 202 5.0E-14 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 PhaeoP54_02086 acdd688c73c2c0079447dc877b7c655f 201 Pfam PF01810 LysE type translocator 13 201 1.4E-38 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 PhaeoP54_03508 40e9ab30726397c8dc95d4afd31915a0 266 SUPERFAMILY SSF53955 58 196 9.6E-17 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily PhaeoP54_03508 40e9ab30726397c8dc95d4afd31915a0 266 Pfam PF01464 Transglycosylase SLT domain 116 180 3.1E-7 T 14-10-2018 IPR008258 Transglycosylase SLT domain 1 PhaeoP54_03508 40e9ab30726397c8dc95d4afd31915a0 266 Gene3D G3DSA:1.10.530.10 55 217 3.9E-8 T 14-10-2018 PhaeoP54_01277 c7fdbaeed326ce3f481b7015c5e90d18 466 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 13 457 5.2E-67 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit PhaeoP54_03650 4a56e45d91cee097d53a2473e42013d9 709 Pfam PF06082 Exopolysaccharide biosynthesis protein YbjH 28 693 4.6E-220 T 14-10-2018 IPR010344 Exopolysaccharide biosynthesis protein YbjH PhaeoP54_02008 031c93e5b92b2294060a115d046ed2c1 334 Pfam PF13387 Domain of unknown function (DUF4105) 125 278 3.6E-39 T 14-10-2018 IPR025178 Domain of unknown function DUF4105 PhaeoP54_01031 63d2c19b5e87ea171cb5dedbda75562a 321 Pfam PF13704 Glycosyl transferase family 2 18 113 7.4E-15 T 14-10-2018 PhaeoP54_02490 f7e38ce37ce198c6deb0896448c2d11a 336 Pfam PF01618 MotA/TolQ/ExbB proton channel family 212 316 1.5E-26 T 14-10-2018 IPR002898 MotA/TolQ/ExbB proton channel PhaeoP54_00291 37b67668c487576135f23a70b2d161f9 111 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 10 106 9.8E-19 T 14-10-2018 IPR008407 Branched-chain amino acid transport, AzlD PhaeoP54_03524 51f196b2705d0172e73c75d69da155fd 123 Pfam PF07309 Flagellar protein FlaF 8 118 1.6E-34 T 14-10-2018 IPR010845 Flagellar FlaF GO:0044781 PhaeoP54_00700 f798ae4ee0ec8db33534457632f8f779 325 Gene3D G3DSA:3.30.420.300 14 99 3.4E-27 T 14-10-2018 PhaeoP54_00700 f798ae4ee0ec8db33534457632f8f779 325 Gene3D G3DSA:3.30.420.310 100 321 9.8E-69 T 14-10-2018 PhaeoP54_00700 f798ae4ee0ec8db33534457632f8f779 325 Pfam PF05035 2-keto-3-deoxy-galactonokinase 24 314 1.3E-97 T 14-10-2018 IPR007729 2-keto-3-deoxy-galactonokinase GO:0008671|GO:0034194 KEGG: 00052+2.7.1.58|MetaCyc: PWY-7130 PhaeoP54_02593 eda08f99a57680a2beddb6df113e1876 349 Pfam PF02653 Branched-chain amino acid transport system / permease component 58 335 1.9E-40 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 PhaeoP54_03756 89b8f29b6eb9c87d126eeda6e5b698c3 216 Pfam PF12525 Protein of unknown function (DUF3726) 3 65 8.3E-22 T 14-10-2018 IPR022201 Protein of unknown function DUF3726 PhaeoP54_01534 a99405a15d1e0de43a3276550464e22e 283 Pfam PF09832 Uncharacterized protein conserved in bacteria (DUF2059) 86 144 1.4E-12 T 14-10-2018 IPR018637 Domain of unknown function DUF2059 PhaeoP54_02326 c1063b58b3089fbfae34461602c1e68c 241 Pfam PF01435 Peptidase family M48 86 233 2.4E-16 T 14-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 PhaeoP54_03325 c0e4a9ffa3d2965fa1a9b4c9a7fadaa1 194 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 63 171 4.9E-16 T 14-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ PhaeoP54_02541 f1f2dc8fccb9eb14234785c9cf786de6 395 Pfam PF10011 Predicted membrane protein (DUF2254) 14 371 1.3E-93 T 14-10-2018 IPR018723 Protein of unknown function DUF2254, membrane PhaeoP54_00336 906f3191c7cd8b80b8b78034665ceac2 251 Pfam PF01925 Sulfite exporter TauE/SafE 13 245 5.0E-27 T 14-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 PhaeoP54_02516 b8c477a305ce948268d495f3d747fbeb 105 SUPERFAMILY SSF54909 1 104 7.43E-29 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel PhaeoP54_02516 b8c477a305ce948268d495f3d747fbeb 105 Pfam PF03992 Antibiotic biosynthesis monooxygenase 12 84 5.4E-13 T 14-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain PhaeoP54_02516 b8c477a305ce948268d495f3d747fbeb 105 Gene3D G3DSA:3.30.70.100 4 101 1.1E-19 T 14-10-2018 PhaeoP54_03523 005fd94a6c4ef9b4945a16048cf9af28 134 Pfam PF07378 Flagellar protein FlbT 4 129 2.8E-41 T 14-10-2018 IPR009967 Flagellum biosynthesis repressor FlbT GO:0006402|GO:0048027|GO:1902209 PhaeoP54_02251 590ec299f7586540a057ad638667fdc9 81 Pfam PF11003 Protein of unknown function (DUF2842) 12 70 1.9E-19 T 14-10-2018 IPR021265 Protein of unknown function DUF2842 PhaeoP54_01470 de6d9b64a9ffb74301d61d807db2e596 515 Pfam PF02386 Cation transport protein 107 507 6.5E-21 T 14-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 PhaeoP54_03226 e50c9e4f7e854b66c6e2228021ab6fc7 64 Pfam PF07896 Protein of unknown function (DUF1674) 23 64 1.8E-14 T 14-10-2018 IPR012875 Protein of unknown function DUF1674 PhaeoP54_00498 42926ae60c5da5fb14c599386cbed94d 428 Pfam PF05917 Helicobacter pylori protein of unknown function (DUF874) 186 279 4.8E-5 T 14-10-2018 IPR008592 Protein of unknown function DUF874 PhaeoP54_00818 6443f6581dae6d6871b28addeca93614 138 Pfam PF06170 Protein of unknown function (DUF983) 44 127 5.5E-31 T 14-10-2018 IPR009325 Protein of unknown function DUF983 PhaeoP54_03634 97548f70de5a2ae6f174aa309369f810 433 Pfam PF02653 Branched-chain amino acid transport system / permease component 54 419 1.3E-38 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 PhaeoP54_03699 b47df262113d5620fa71f0054ecb1a02 61 Pfam PF09926 Uncharacterized small protein (DUF2158) 9 51 4.3E-11 T 14-10-2018 IPR019226 Protein of unknown function DUF2158 PhaeoP54_03866 1d4342ef7f495c70a4afbf8925e7ba2c 97 Pfam PF04956 TrbC/VIRB2 family 4 92 8.3E-20 T 14-10-2018 IPR007039 Conjugal transfer TrbC/type IV secretion VirB2 PhaeoP54_02719 528b4abac6b3bb117755c6aac41283f9 104 Pfam PF11196 Protein of unknown function (DUF2834) 6 100 9.5E-29 T 14-10-2018 IPR021362 Protein of unknown function DUF2834 PhaeoP54_01238 22a9fc029b14c649be6b9903b9624e98 120 Pfam PF09923 Uncharacterized protein conserved in bacteria (DUF2155) 29 117 9.7E-29 T 14-10-2018 IPR019225 Protein of unknown function DUF2155 PhaeoP54_00762 1f1fc97eba00b6790d7fc1a4e3e93348 310 Pfam PF03547 Membrane transport protein 8 133 8.5E-16 T 14-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 PhaeoP54_00762 1f1fc97eba00b6790d7fc1a4e3e93348 310 Pfam PF03547 Membrane transport protein 173 305 1.9E-13 T 14-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 PhaeoP54_01445 7b3d55d91fdcd539bd3cba7b1033b557 381 Gene3D G3DSA:2.40.160.60 12 381 5.5E-24 T 14-10-2018 PhaeoP54_01445 7b3d55d91fdcd539bd3cba7b1033b557 381 SUPERFAMILY SSF56935 4 381 1.83E-48 T 14-10-2018 PhaeoP54_03854 90328951c861162ef0c015f899de7487 358 Pfam PF04610 TrbL/VirB6 plasmid conjugal transfer protein 39 255 3.1E-34 T 14-10-2018 IPR007688 Plasmid conjugal transfer TrbL/VirB6 GO:0030255 PhaeoP54_00814 ea4e148fa74cdb0e13eefcd67ac83417 68 Pfam PF09834 Predicted membrane protein (DUF2061) 8 59 1.2E-16 T 14-10-2018 IPR018638 Domain of unknown function DUF2061, membrane PhaeoP54_00488 b10e5a9a90eeadefe34fb113eb030ba3 92 Pfam PF09928 Predicted small integral membrane protein (DUF2160) 4 92 1.5E-33 T 14-10-2018 IPR018678 Protein of unknown function DUF2160, transmembrane PhaeoP54_01220 e24db309c02da791fd0502b1da6cfc73 245 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 9 223 1.4E-52 T 14-10-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 PhaeoP54_01055 361689ec809ca40c34890dd99ab25f29 234 Pfam PF13403 Hint domain 44 164 2.6E-7 T 14-10-2018 IPR028992 Hedgehog/Intein (Hint) domain PhaeoP54_02411 3390da9eaf9a711242ced7f60444f1ad 190 Pfam PF07691 PA14 domain 87 167 5.0E-8 T 14-10-2018 IPR011658 PA14 domain PhaeoP54_03237 1a0c669ca49b7dfbf7ecb8be08a945eb 237 Pfam PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) 3 177 2.4E-11 T 14-10-2018 IPR002654 Glycosyl transferase, family 25 PhaeoP54_00365 995dfa2f014cba3792a3c8d5a7b6b92c 321 Pfam PF02653 Branched-chain amino acid transport system / permease component 11 300 5.2E-34 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 PhaeoP54_02669 652d38cbdf4606283a9c650b3684a828 63 PIRSF PIRSF036704 1 63 4.0E-10 T 14-10-2018 IPR014177 Putative formate dehydrogenase, TAT signal-containing PhaeoP54_02122 3db1fe08b1d2c2b120f5fbfa1a5b353f 383 Pfam PF11781 Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7 28 58 6.0E-9 T 14-10-2018 IPR021752 Transcription initiation factor Rrn7, Zinc-finger Reactome: R-HSA-427359|Reactome: R-HSA-427413|Reactome: R-HSA-5250924|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73777|Reactome: R-HSA-73863 PhaeoP54_02884 b9fbd1a7f650a2d08041dfbcaac293ee 64 Pfam PF04102 SlyX 2 64 8.3E-19 T 14-10-2018 IPR007236 SlyX PhaeoP54_00513 0f27e06c6acc091a46914573a89f8e77 1221 Pfam PF04357 TamB, inner membrane protein subunit of TAM complex 875 1221 4.3E-36 T 14-10-2018 IPR007452 Translocation and assembly module TamB PhaeoP54_00893 c842602dfb8334657af46dc5fe884600 160 Pfam PF11066 Protein of unknown function (DUF2867) 23 140 1.8E-26 T 14-10-2018 IPR021295 Protein of unknown function DUF2867 PhaeoP54_01332 98ed25fac6ac9cb6556b6750ca7afcf2 68 Pfam PF13770 Domain of unknown function (DUF4169) 8 60 9.5E-21 T 14-10-2018 IPR025227 Protein of unknown function DUF4169 PhaeoP54_02460 6be738328c704ff0e01b99baf65d1a1e 285 Pfam PF06629 MltA-interacting protein MipA 60 285 1.2E-35 T 14-10-2018 IPR010583 MltA-interacting MipA PhaeoP54_00496 757e8241d308f703fc883ebac188997b 328 Pfam PF02397 Bacterial sugar transferase 134 323 5.5E-56 T 14-10-2018 IPR003362 Bacterial sugar transferase PhaeoP54_00264 c80f6ce5d9fe8b96b785dd23924fd319 104 SUPERFAMILY SSF46579 50 102 1.28E-5 T 14-10-2018 PhaeoP54_00363 1a0bc5bfb4df4875981c5ddf445e1c56 296 Pfam PF09608 Putative transmembrane protein (Alph_Pro_TM) 64 291 2.1E-79 T 14-10-2018 IPR019088 Conserved hypothetical protein CHP02186-related, transmembrane