PhaeoP97_00035	PWY-3781	aerobic respiration I (cytochrome c)
PhaeoP97_00035	PWY-4521	arsenite oxidation I (respiratory)
PhaeoP97_00035	PWY-6692	Fe(II) oxidation
PhaeoP97_00035	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
PhaeoP97_00042	PWY-3781	aerobic respiration I (cytochrome c)
PhaeoP97_00042	PWY-4521	arsenite oxidation I (respiratory)
PhaeoP97_00042	PWY-6692	Fe(II) oxidation
PhaeoP97_00042	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
PhaeoP97_00069	PWY-5381	pyridine nucleotide cycling (plants)
PhaeoP97_00077	PWY-6654	phosphopantothenate biosynthesis III
PhaeoP97_00079	PWY-4261	glycerol degradation I
PhaeoP97_00081	PWY-5123	<i>trans, trans</i>-farnesyl diphosphate biosynthesis
PhaeoP97_00081	PWY-6174	mevalonate pathway II (archaea)
PhaeoP97_00081	PWY-6383	mono-<i>trans</i>, poly-<i>cis</i> decaprenyl phosphate biosynthesis
PhaeoP97_00081	PWY-6859	<i>all-trans</i>-farnesol biosynthesis
PhaeoP97_00081	PWY-7102	bisabolene biosynthesis
PhaeoP97_00081	PWY-7391	isoprene biosynthesis II (engineered)
PhaeoP97_00081	PWY-7524	mevalonate pathway III (archaea)
PhaeoP97_00081	PWY-7560	methylerythritol phosphate pathway II
PhaeoP97_00081	PWY-922	mevalonate pathway I
PhaeoP97_00083	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
PhaeoP97_00096	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
PhaeoP97_00096	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
PhaeoP97_00096	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
PhaeoP97_00096	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
PhaeoP97_00114	PWY-4381	fatty acid biosynthesis initiation I
PhaeoP97_00114	PWY-5743	3-hydroxypropanoate cycle
PhaeoP97_00114	PWY-5744	glyoxylate assimilation
PhaeoP97_00114	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
PhaeoP97_00114	PWY-6722	candicidin biosynthesis
PhaeoP97_00115	PWY-2161	folate polyglutamylation
PhaeoP97_00123	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
PhaeoP97_00132	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
PhaeoP97_00132	PWY-5743	3-hydroxypropanoate cycle
PhaeoP97_00132	PWY-5744	glyoxylate assimilation
PhaeoP97_00132	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
PhaeoP97_00132	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
PhaeoP97_00132	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
PhaeoP97_00132	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
PhaeoP97_00135	PWY-2941	L-lysine biosynthesis II
PhaeoP97_00135	PWY-2942	L-lysine biosynthesis III
PhaeoP97_00135	PWY-5097	L-lysine biosynthesis VI
PhaeoP97_00135	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
PhaeoP97_00135	PWY-6160	3-dehydroquinate biosynthesis II (archaea)
PhaeoP97_00135	PWY-6559	spermidine biosynthesis II
PhaeoP97_00135	PWY-6562	norspermidine biosynthesis
PhaeoP97_00135	PWY-7153	grixazone biosynthesis
PhaeoP97_00135	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
PhaeoP97_00135	PWY-7977	PhaeoP97_00135
PhaeoP97_00193	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
PhaeoP97_00193	PWY-3162	L-tryptophan degradation V (side chain pathway)
PhaeoP97_00193	PWY-5057	L-valine degradation II
PhaeoP97_00193	PWY-5076	L-leucine degradation III
PhaeoP97_00193	PWY-5078	L-isoleucine degradation II
PhaeoP97_00193	PWY-5079	L-phenylalanine degradation III
PhaeoP97_00193	PWY-5082	L-methionine degradation III
PhaeoP97_00193	PWY-5480	pyruvate fermentation to ethanol I
PhaeoP97_00193	PWY-5486	pyruvate fermentation to ethanol II
PhaeoP97_00193	PWY-5751	phenylethanol biosynthesis
PhaeoP97_00193	PWY-6313	serotonin degradation
PhaeoP97_00193	PWY-6333	acetaldehyde biosynthesis I
PhaeoP97_00193	PWY-6342	noradrenaline and adrenaline degradation
PhaeoP97_00193	PWY-6587	pyruvate fermentation to ethanol III
PhaeoP97_00193	PWY-6802	salidroside biosynthesis
PhaeoP97_00193	PWY-6871	3-methylbutanol biosynthesis
PhaeoP97_00193	PWY-7013	L-1,2-propanediol degradation
PhaeoP97_00193	PWY-7111	pyruvate fermentation to isobutanol (engineered)
PhaeoP97_00193	PWY-7118	chitin degradation to ethanol
PhaeoP97_00193	PWY-7396	butanol and isobutanol biosynthesis (engineered)
PhaeoP97_00193	PWY-7798	PhaeoP97_00193
PhaeoP97_00197	PWY-6041	4-sulfocatechol degradation
PhaeoP97_00198	PWY-6041	4-sulfocatechol degradation
PhaeoP97_00266	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
PhaeoP97_00282	PWY-6829	tRNA methylation (yeast)
PhaeoP97_00282	PWY-7285	methylwyosine biosynthesis
PhaeoP97_00282	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
PhaeoP97_00284	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
PhaeoP97_00286	PWY-3461	L-tyrosine biosynthesis II
PhaeoP97_00286	PWY-3462	L-phenylalanine biosynthesis II
PhaeoP97_00286	PWY-6120	L-tyrosine biosynthesis III
PhaeoP97_00286	PWY-6627	salinosporamide A biosynthesis
PhaeoP97_00286	PWY-7626	bacilysin biosynthesis
PhaeoP97_00324	PWY-7560	methylerythritol phosphate pathway II
PhaeoP97_00326	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
PhaeoP97_00326	PWY-6148	tetrahydromethanopterin biosynthesis
PhaeoP97_00326	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
PhaeoP97_00326	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
PhaeoP97_00326	PWY-7852	PhaeoP97_00326
PhaeoP97_00326	PWY-7853	PhaeoP97_00326
PhaeoP97_00331	PWY-6012	acyl carrier protein metabolism I
PhaeoP97_00331	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
PhaeoP97_00331	PWY-6289	petrobactin biosynthesis
PhaeoP97_00341	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
PhaeoP97_00341	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
PhaeoP97_00349	PWY-1361	benzoyl-CoA degradation I (aerobic)
PhaeoP97_00349	PWY-5109	2-methylbutanoate biosynthesis
PhaeoP97_00349	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
PhaeoP97_00349	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
PhaeoP97_00349	PWY-5177	glutaryl-CoA degradation
PhaeoP97_00349	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
PhaeoP97_00349	PWY-6435	4-hydroxybenzoate biosynthesis V
PhaeoP97_00349	PWY-6583	pyruvate fermentation to butanol I
PhaeoP97_00349	PWY-6863	pyruvate fermentation to hexanol
PhaeoP97_00349	PWY-6883	pyruvate fermentation to butanol II
PhaeoP97_00349	PWY-6944	androstenedione degradation
PhaeoP97_00349	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
PhaeoP97_00349	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
PhaeoP97_00349	PWY-7007	methyl ketone biosynthesis
PhaeoP97_00349	PWY-7046	4-coumarate degradation (anaerobic)
PhaeoP97_00349	PWY-7094	fatty acid salvage
PhaeoP97_00349	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
PhaeoP97_00349	PWY-735	jasmonic acid biosynthesis
PhaeoP97_00349	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
PhaeoP97_00349	PWY-7606	docosahexaenoate biosynthesis III (mammals)
PhaeoP97_00349	PWY-7654	(8<i>E</i>,10<i>E</i>)-dodeca-8,10-dienol biosynthesis
PhaeoP97_00349	PWY-7656	<i>Spodoptera littoralis</i> pheromone biosynthesis
PhaeoP97_00349	PWY-7726	PhaeoP97_00349
PhaeoP97_00349	PWY-7778	PhaeoP97_00349
PhaeoP97_00349	PWY-7779	PhaeoP97_00349
PhaeoP97_00365	PWY-7437	protein <i>O</i>-[<i>N</i>-acetyl]-glucosylation
PhaeoP97_00413	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
PhaeoP97_00431	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
PhaeoP97_00431	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
PhaeoP97_00434	PWY-5963	thio-molybdenum cofactor biosynthesis
PhaeoP97_00453	PWY-4381	fatty acid biosynthesis initiation I
PhaeoP97_00453	PWY-5743	3-hydroxypropanoate cycle
PhaeoP97_00453	PWY-5744	glyoxylate assimilation
PhaeoP97_00453	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
PhaeoP97_00453	PWY-6722	candicidin biosynthesis
PhaeoP97_00485	PWY-5381	pyridine nucleotide cycling (plants)
PhaeoP97_00485	PWY-7761	PhaeoP97_00485
PhaeoP97_00487	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
PhaeoP97_00495	PWY-3781	aerobic respiration I (cytochrome c)
PhaeoP97_00495	PWY-4521	arsenite oxidation I (respiratory)
PhaeoP97_00495	PWY-6692	Fe(II) oxidation
PhaeoP97_00495	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
PhaeoP97_00509	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
PhaeoP97_00511	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
PhaeoP97_00511	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
PhaeoP97_00512	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
PhaeoP97_00512	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
PhaeoP97_00512	PWY-7766	PhaeoP97_00512
PhaeoP97_00523	PWY-7396	butanol and isobutanol biosynthesis (engineered)
PhaeoP97_00557	PWY-5101	L-isoleucine biosynthesis II
PhaeoP97_00557	PWY-5103	L-isoleucine biosynthesis III
PhaeoP97_00557	PWY-5104	L-isoleucine biosynthesis IV
PhaeoP97_00557	PWY-7111	pyruvate fermentation to isobutanol (engineered)
PhaeoP97_00563	PWY-5350	thiosulfate disproportionation III (rhodanese)
PhaeoP97_00563	PWY-7927	PhaeoP97_00563
PhaeoP97_00564	PWY-5913	TCA cycle VI (obligate autotrophs)
PhaeoP97_00564	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
PhaeoP97_00564	PWY-6638	sulfolactate degradation III
PhaeoP97_00564	PWY-6642	(<i>R</i>)-cysteate degradation
PhaeoP97_00564	PWY-6643	coenzyme M biosynthesis II
PhaeoP97_00564	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
PhaeoP97_00564	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
PhaeoP97_00564	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
PhaeoP97_00567	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
PhaeoP97_00567	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
PhaeoP97_00567	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
PhaeoP97_00567	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
PhaeoP97_00576	PWY-7158	L-phenylalanine degradation V
PhaeoP97_00582	PWY-7799	PhaeoP97_00582
PhaeoP97_00582	PWY-7800	PhaeoP97_00582
PhaeoP97_00609	PWY-7892	PhaeoP97_00609
PhaeoP97_00612	PWY-2941	L-lysine biosynthesis II
PhaeoP97_00612	PWY-2942	L-lysine biosynthesis III
PhaeoP97_00612	PWY-5097	L-lysine biosynthesis VI
PhaeoP97_00620	PWY-1281	sulfoacetaldehyde degradation I
PhaeoP97_00620	PWY-5482	pyruvate fermentation to acetate II
PhaeoP97_00620	PWY-5485	pyruvate fermentation to acetate IV
PhaeoP97_00620	PWY-5497	purine nucleobases degradation II (anaerobic)
PhaeoP97_00620	PWY-6637	sulfolactate degradation II
PhaeoP97_00621	PWY-5482	pyruvate fermentation to acetate II
PhaeoP97_00621	PWY-5485	pyruvate fermentation to acetate IV
PhaeoP97_00621	PWY-5497	purine nucleobases degradation II (anaerobic)
PhaeoP97_00623	PWY-1281	sulfoacetaldehyde degradation I
PhaeoP97_00623	PWY-6637	sulfolactate degradation II
PhaeoP97_00636	PWY-4041	&gamma;-glutamyl cycle
PhaeoP97_00636	PWY-7942	PhaeoP97_00636
PhaeoP97_00669	PWY-5913	TCA cycle VI (obligate autotrophs)
PhaeoP97_00669	PWY-6549	L-glutamine biosynthesis III
PhaeoP97_00669	PWY-6728	methylaspartate cycle
PhaeoP97_00669	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
PhaeoP97_00669	PWY-7124	ethylene biosynthesis V (engineered)
PhaeoP97_00669	PWY-7254	TCA cycle VII (acetate-producers)
PhaeoP97_00669	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
PhaeoP97_00678	PWY-4041	&gamma;-glutamyl cycle
PhaeoP97_00678	PWY-4061	glutathione-mediated detoxification I
PhaeoP97_00678	PWY-5826	hypoglycin biosynthesis
PhaeoP97_00678	PWY-6842	glutathione-mediated detoxification II
PhaeoP97_00678	PWY-7112	4-hydroxy-2-nonenal detoxification
PhaeoP97_00678	PWY-7559	glutathione degradation (DUG pathway - yeast)
PhaeoP97_00692	PWY-5497	purine nucleobases degradation II (anaerobic)
PhaeoP97_00692	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
PhaeoP97_00692	PWY-6538	caffeine degradation III (bacteria, via demethylation)
PhaeoP97_00692	PWY-6596	adenosine nucleotides degradation I
PhaeoP97_00692	PWY-6606	guanosine nucleotides degradation II
PhaeoP97_00692	PWY-6607	guanosine nucleotides degradation I
PhaeoP97_00692	PWY-6608	guanosine nucleotides degradation III
PhaeoP97_00692	PWY-6999	theophylline degradation
PhaeoP97_00693	PWY-5497	purine nucleobases degradation II (anaerobic)
PhaeoP97_00693	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
PhaeoP97_00693	PWY-6538	caffeine degradation III (bacteria, via demethylation)
PhaeoP97_00693	PWY-6596	adenosine nucleotides degradation I
PhaeoP97_00693	PWY-6606	guanosine nucleotides degradation II
PhaeoP97_00693	PWY-6607	guanosine nucleotides degradation I
PhaeoP97_00693	PWY-6608	guanosine nucleotides degradation III
PhaeoP97_00693	PWY-6999	theophylline degradation
PhaeoP97_00696	PWY-5833	CDP-4-dehydro-3,6-dideoxy-D-glucose biosynthesis
PhaeoP97_00696	PWY-5940	streptomycin biosynthesis
PhaeoP97_00697	PWY-5833	CDP-4-dehydro-3,6-dideoxy-D-glucose biosynthesis
PhaeoP97_00710	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
PhaeoP97_00710	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
PhaeoP97_00710	PWY-7242	D-fructuronate degradation
PhaeoP97_00710	PWY-7310	D-glucosaminate degradation
PhaeoP97_00710	PWY-7562	3,6-anhydro-&alpha;-L-galactopyranose degradation
PhaeoP97_00711	PWY-5101	L-isoleucine biosynthesis II
PhaeoP97_00711	PWY-5103	L-isoleucine biosynthesis III
PhaeoP97_00711	PWY-5104	L-isoleucine biosynthesis IV
PhaeoP97_00711	PWY-7111	pyruvate fermentation to isobutanol (engineered)
PhaeoP97_00712	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
PhaeoP97_00713	PWY-3801	sucrose degradation II (sucrose synthase)
PhaeoP97_00713	PWY-5054	sorbitol biosynthesis I
PhaeoP97_00713	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
PhaeoP97_00713	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
PhaeoP97_00713	PWY-5659	GDP-mannose biosynthesis
PhaeoP97_00713	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
PhaeoP97_00713	PWY-621	sucrose degradation III (sucrose invertase)
PhaeoP97_00713	PWY-622	starch biosynthesis
PhaeoP97_00713	PWY-6981	chitin biosynthesis
PhaeoP97_00713	PWY-6992	1,5-anhydrofructose degradation
PhaeoP97_00713	PWY-7238	sucrose biosynthesis II
PhaeoP97_00713	PWY-7347	sucrose biosynthesis III
PhaeoP97_00713	PWY-7385	1,3-propanediol biosynthesis (engineered)
PhaeoP97_00723	PWY-6906	chitin derivatives degradation
PhaeoP97_00723	PWY-7077	<i>N</i>-acetyl-D-galactosamine degradation
PhaeoP97_00723	PWY-7395	D-galactosamine and <i>N</i>-acetyl-D-galactosamine degradation
PhaeoP97_00731	PWY-5316	nicotine biosynthesis
PhaeoP97_00731	PWY-5381	pyridine nucleotide cycling (plants)
PhaeoP97_00731	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
PhaeoP97_00731	PWY-7342	superpathway of nicotine biosynthesis
PhaeoP97_00733	PWY-5316	nicotine biosynthesis
PhaeoP97_00733	PWY-7342	superpathway of nicotine biosynthesis
PhaeoP97_00738	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
PhaeoP97_00738	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
PhaeoP97_00763	PWY-1042	glycolysis IV (plant cytosol)
PhaeoP97_00763	PWY-5484	glycolysis II (from fructose 6-phosphate)
PhaeoP97_00763	PWY-6901	superpathway of glucose and xylose degradation
PhaeoP97_00763	PWY-7003	glycerol degradation to butanol
PhaeoP97_00771	PWY-7376	cob(II)yrinate <i>a,c</i>-diamide biosynthesis II (late cobalt incorporation)
PhaeoP97_00774	PWY-5194	siroheme biosynthesis
PhaeoP97_00774	PWY-5196	factor 430 biosynthesis
PhaeoP97_00774	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
PhaeoP97_00776	PWY-5194	siroheme biosynthesis
PhaeoP97_00776	PWY-5196	factor 430 biosynthesis
PhaeoP97_00776	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
PhaeoP97_00778	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
PhaeoP97_00783	PWY-6683	sulfate reduction III (assimilatory)
PhaeoP97_00791	PWY-4261	glycerol degradation I
PhaeoP97_00791	PWY-6118	glycerol-3-phosphate shuttle
PhaeoP97_00791	PWY-6952	glycerophosphodiester degradation
PhaeoP97_00806	PWY-1361	benzoyl-CoA degradation I (aerobic)
PhaeoP97_00806	PWY-3602	L-carnitine degradation II
PhaeoP97_00806	PWY-5109	2-methylbutanoate biosynthesis
PhaeoP97_00806	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
PhaeoP97_00806	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
PhaeoP97_00806	PWY-5177	glutaryl-CoA degradation
PhaeoP97_00806	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
PhaeoP97_00806	PWY-6435	4-hydroxybenzoate biosynthesis V
PhaeoP97_00806	PWY-6583	pyruvate fermentation to butanol I
PhaeoP97_00806	PWY-6863	pyruvate fermentation to hexanol
PhaeoP97_00806	PWY-6883	pyruvate fermentation to butanol II
PhaeoP97_00806	PWY-6944	androstenedione degradation
PhaeoP97_00806	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
PhaeoP97_00806	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
PhaeoP97_00806	PWY-7007	methyl ketone biosynthesis
PhaeoP97_00806	PWY-7046	4-coumarate degradation (anaerobic)
PhaeoP97_00806	PWY-7094	fatty acid salvage
PhaeoP97_00806	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
PhaeoP97_00806	PWY-735	jasmonic acid biosynthesis
PhaeoP97_00806	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
PhaeoP97_00806	PWY-7472	D-carnitine degradation II
PhaeoP97_00806	PWY-7606	docosahexaenoate biosynthesis III (mammals)
PhaeoP97_00806	PWY-7654	(8<i>E</i>,10<i>E</i>)-dodeca-8,10-dienol biosynthesis
PhaeoP97_00806	PWY-7656	<i>Spodoptera littoralis</i> pheromone biosynthesis
PhaeoP97_00806	PWY-7726	PhaeoP97_00806
PhaeoP97_00806	PWY-7778	PhaeoP97_00806
PhaeoP97_00806	PWY-7779	PhaeoP97_00806
PhaeoP97_00821	PWY-5250	methanogenesis from trimethylamine
PhaeoP97_00827	PWY-7805	PhaeoP97_00827
PhaeoP97_00827	PWY-7807	PhaeoP97_00827
PhaeoP97_00828	PWY-5484	glycolysis II (from fructose 6-phosphate)
PhaeoP97_00839	PWY-3661	glycine betaine degradation I
PhaeoP97_00839	PWY-4722	creatinine degradation II
PhaeoP97_00840	PWY-3661	glycine betaine degradation I
PhaeoP97_00840	PWY-4722	creatinine degradation II
PhaeoP97_00841	PWY-3661	glycine betaine degradation I
PhaeoP97_00841	PWY-4722	creatinine degradation II
PhaeoP97_00842	PWY-3661	glycine betaine degradation I
PhaeoP97_00842	PWY-4722	creatinine degradation II
PhaeoP97_00852	PWY-7991	PhaeoP97_00852
PhaeoP97_00856	PWY-6167	flavin biosynthesis II (archaea)
PhaeoP97_00856	PWY-6168	flavin biosynthesis III (fungi)
PhaeoP97_00856	PWY-7980	PhaeoP97_00856
PhaeoP97_00858	PWY-6167	flavin biosynthesis II (archaea)
PhaeoP97_00858	PWY-6168	flavin biosynthesis III (fungi)
PhaeoP97_00858	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
PhaeoP97_00858	PWY-7991	PhaeoP97_00858
PhaeoP97_00859	PWY-6167	flavin biosynthesis II (archaea)
PhaeoP97_00859	PWY-6168	flavin biosynthesis III (fungi)
PhaeoP97_00871	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
PhaeoP97_00871	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
PhaeoP97_00871	PWY-6897	thiamin salvage II
PhaeoP97_00871	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
PhaeoP97_00871	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
PhaeoP97_00871	PWY-7356	thiamin salvage IV (yeast)
PhaeoP97_00871	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
PhaeoP97_00872	PWY-6891	thiazole biosynthesis II (Bacillus)
PhaeoP97_00872	PWY-6892	thiazole biosynthesis I (E. coli)
PhaeoP97_00875	PWY-6890	4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis
PhaeoP97_00877	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
PhaeoP97_00879	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
PhaeoP97_00908	PWY-5750	itaconate biosynthesis
PhaeoP97_00908	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
PhaeoP97_00908	PWY-6146	<i>Methanobacterium thermoautotrophicum</i> biosynthetic metabolism
PhaeoP97_00920	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
PhaeoP97_00920	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
PhaeoP97_00920	PWY-7953	PhaeoP97_00920
PhaeoP97_00921	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
PhaeoP97_00921	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
PhaeoP97_00921	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
PhaeoP97_00923	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
PhaeoP97_00923	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
PhaeoP97_00928	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
PhaeoP97_00928	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
PhaeoP97_00928	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
PhaeoP97_00928	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
PhaeoP97_00929	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
PhaeoP97_00929	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
PhaeoP97_00929	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
PhaeoP97_00929	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
PhaeoP97_00930	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
PhaeoP97_00930	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
PhaeoP97_00930	PWY-7953	PhaeoP97_00930
PhaeoP97_00933	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
PhaeoP97_00933	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
PhaeoP97_00933	PWY-7953	PhaeoP97_00933
PhaeoP97_00935	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
PhaeoP97_00935	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
PhaeoP97_00935	PWY-7953	PhaeoP97_00935
PhaeoP97_00946	PWY-7376	cob(II)yrinate <i>a,c</i>-diamide biosynthesis II (late cobalt incorporation)
PhaeoP97_00948	PWY-7376	cob(II)yrinate <i>a,c</i>-diamide biosynthesis II (late cobalt incorporation)
PhaeoP97_00962	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
PhaeoP97_00962	PWY-7118	chitin degradation to ethanol
PhaeoP97_00962	PWY-7294	xylose degradation IV
PhaeoP97_00962	PWY-7295	L-arabinose degradation IV
PhaeoP97_00962	PWY-7854	PhaeoP97_00962
PhaeoP97_00969	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
PhaeoP97_00969	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
PhaeoP97_00973	PWY-6825	phosphatidylcholine biosynthesis V
PhaeoP97_00985	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
PhaeoP97_00990	PWY-7675	Kdo transfer to lipid IV<sub>A</sub> II
PhaeoP97_00991	PWY-6823	molybdenum cofactor biosynthesis
PhaeoP97_00994	PWY-6749	CMP-legionaminate biosynthesis I
PhaeoP97_00995	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
PhaeoP97_01003	PWY-4381	fatty acid biosynthesis initiation I
PhaeoP97_01003	PWY-5743	3-hydroxypropanoate cycle
PhaeoP97_01003	PWY-5744	glyoxylate assimilation
PhaeoP97_01003	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
PhaeoP97_01003	PWY-6722	candicidin biosynthesis
PhaeoP97_01025	PWY-3781	aerobic respiration I (cytochrome c)
PhaeoP97_01025	PWY-4302	aerobic respiration III (alternative oxidase pathway)
PhaeoP97_01025	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
PhaeoP97_01025	PWY-6692	Fe(II) oxidation
PhaeoP97_01027	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
PhaeoP97_01027	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
PhaeoP97_01028	PWY-3961	phosphopantothenate biosynthesis II
PhaeoP97_01049	PWY-5381	pyridine nucleotide cycling (plants)
PhaeoP97_01049	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
PhaeoP97_01049	PWY-6596	adenosine nucleotides degradation I
PhaeoP97_01049	PWY-6606	guanosine nucleotides degradation II
PhaeoP97_01049	PWY-6607	guanosine nucleotides degradation I
PhaeoP97_01049	PWY-6608	guanosine nucleotides degradation III
PhaeoP97_01049	PWY-7185	UTP and CTP dephosphorylation I
PhaeoP97_01049	PWY-7821	PhaeoP97_01049
PhaeoP97_01053	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
PhaeoP97_01053	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
PhaeoP97_01053	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
PhaeoP97_01053	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
PhaeoP97_01062	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
PhaeoP97_01064	PWY-5686	UMP biosynthesis
PhaeoP97_01064	PWY-7790	PhaeoP97_01064
PhaeoP97_01064	PWY-7791	PhaeoP97_01064
PhaeoP97_01065	PWY-5686	UMP biosynthesis
PhaeoP97_01065	PWY-7790	PhaeoP97_01065
PhaeoP97_01065	PWY-7791	PhaeoP97_01065
PhaeoP97_01083	PWY-7352	daunorubicin biosynthesis
PhaeoP97_01083	PWY-7354	aclacinomycin biosynthesis
PhaeoP97_01084	PWY-3722	glycine betaine biosynthesis II (Gram-positive bacteria)
PhaeoP97_01084	PWY-7494	choline degradation IV
PhaeoP97_01085	PWY-7352	daunorubicin biosynthesis
PhaeoP97_01085	PWY-7354	aclacinomycin biosynthesis
PhaeoP97_01087	PWY-7352	daunorubicin biosynthesis
PhaeoP97_01087	PWY-7354	aclacinomycin biosynthesis
PhaeoP97_01090	PWY-7352	daunorubicin biosynthesis
PhaeoP97_01090	PWY-7354	aclacinomycin biosynthesis
PhaeoP97_01092	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
PhaeoP97_01092	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
PhaeoP97_01092	PWY-6936	seleno-amino acid biosynthesis
PhaeoP97_01092	PWY-702	L-methionine biosynthesis II
PhaeoP97_01119	PWY-4381	fatty acid biosynthesis initiation I
PhaeoP97_01127	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
PhaeoP97_01129	PWY-6519	8-amino-7-oxononanoate biosynthesis I
PhaeoP97_01129	PWY-6578	8-amino-7-oxononanoate biosynthesis III
PhaeoP97_01129	PWY-7147	8-amino-7-oxononanoate biosynthesis II
PhaeoP97_01131	PWY-7883	PhaeoP97_01131
PhaeoP97_01138	PWY-1042	glycolysis IV (plant cytosol)
PhaeoP97_01138	PWY-1622	formaldehyde assimilation I (serine pathway)
PhaeoP97_01138	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
PhaeoP97_01138	PWY-5484	glycolysis II (from fructose 6-phosphate)
PhaeoP97_01138	PWY-5723	Rubisco shunt
PhaeoP97_01138	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
PhaeoP97_01138	PWY-6886	1-butanol autotrophic biosynthesis
PhaeoP97_01138	PWY-6901	superpathway of glucose and xylose degradation
PhaeoP97_01138	PWY-7003	glycerol degradation to butanol
PhaeoP97_01138	PWY-7124	ethylene biosynthesis V (engineered)
PhaeoP97_01138	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
PhaeoP97_01147	PWY-381	nitrate reduction II (assimilatory)
PhaeoP97_01147	PWY-5675	nitrate reduction V (assimilatory)
PhaeoP97_01147	PWY-6549	L-glutamine biosynthesis III
PhaeoP97_01147	PWY-6963	ammonia assimilation cycle I
PhaeoP97_01147	PWY-6964	ammonia assimilation cycle II
PhaeoP97_01149	PWY-381	nitrate reduction II (assimilatory)
PhaeoP97_01149	PWY-5675	nitrate reduction V (assimilatory)
PhaeoP97_01149	PWY-6549	L-glutamine biosynthesis III
PhaeoP97_01149	PWY-6963	ammonia assimilation cycle I
PhaeoP97_01149	PWY-6964	ammonia assimilation cycle II
PhaeoP97_01165	PWY-2201	folate transformations I
PhaeoP97_01165	PWY-3841	folate transformations II
PhaeoP97_01167	PWY-2301	<i>myo</i>-inositol biosynthesis
PhaeoP97_01167	PWY-4702	phytate degradation I
PhaeoP97_01167	PWY-6363	D-<i>myo</i>-inositol (1,4,5)-trisphosphate degradation
PhaeoP97_01168	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
PhaeoP97_01170	PWY-5737	(5<i>R</i>)-carbapenem carboxylate biosynthesis
PhaeoP97_01170	PWY-6853	ethylene biosynthesis II (microbes)
PhaeoP97_01170	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
PhaeoP97_01184	PWY-1622	formaldehyde assimilation I (serine pathway)
PhaeoP97_01184	PWY-181	photorespiration
PhaeoP97_01184	PWY-2161	folate polyglutamylation
PhaeoP97_01184	PWY-2201	folate transformations I
PhaeoP97_01184	PWY-3661	glycine betaine degradation I
PhaeoP97_01184	PWY-3661-1	glycine betaine degradation II (mammalian)
PhaeoP97_01184	PWY-3841	folate transformations II
PhaeoP97_01184	PWY-5497	purine nucleobases degradation II (anaerobic)
PhaeoP97_01185	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
PhaeoP97_01185	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
PhaeoP97_01185	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
PhaeoP97_01186	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
PhaeoP97_01187	PWY-5108	L-isoleucine biosynthesis V
PhaeoP97_01187	PWY-5132	humulone biosynthesis
PhaeoP97_01187	PWY-5133	cohumulone biosynthesis
PhaeoP97_01187	PWY-6672	<i>cis</i>-genanyl-CoA degradation
PhaeoP97_01187	PWY-7118	chitin degradation to ethanol
PhaeoP97_01187	PWY-7857	PhaeoP97_01187
PhaeoP97_01188	PWY-1281	sulfoacetaldehyde degradation I
PhaeoP97_01188	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
PhaeoP97_01188	PWY-5482	pyruvate fermentation to acetate II
PhaeoP97_01188	PWY-5485	pyruvate fermentation to acetate IV
PhaeoP97_01188	PWY-5497	purine nucleobases degradation II (anaerobic)
PhaeoP97_01188	PWY-6637	sulfolactate degradation II
PhaeoP97_01188	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
PhaeoP97_01190	PWY-6556	pyrimidine ribonucleosides salvage II
PhaeoP97_01190	PWY-7181	pyrimidine deoxyribonucleosides degradation
PhaeoP97_01190	PWY-7193	pyrimidine ribonucleosides salvage I
PhaeoP97_01190	PWY-7199	pyrimidine deoxyribonucleosides salvage
PhaeoP97_01191	PWY-7181	pyrimidine deoxyribonucleosides degradation
PhaeoP97_01192	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
PhaeoP97_01193	PWY-7183	pyrimidine nucleobases salvage I
PhaeoP97_01199	PWY-1361	benzoyl-CoA degradation I (aerobic)
PhaeoP97_01199	PWY-5109	2-methylbutanoate biosynthesis
PhaeoP97_01199	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
PhaeoP97_01199	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
PhaeoP97_01199	PWY-5177	glutaryl-CoA degradation
PhaeoP97_01199	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
PhaeoP97_01199	PWY-6435	4-hydroxybenzoate biosynthesis V
PhaeoP97_01199	PWY-6583	pyruvate fermentation to butanol I
PhaeoP97_01199	PWY-6863	pyruvate fermentation to hexanol
PhaeoP97_01199	PWY-6883	pyruvate fermentation to butanol II
PhaeoP97_01199	PWY-6944	androstenedione degradation
PhaeoP97_01199	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
PhaeoP97_01199	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
PhaeoP97_01199	PWY-7007	methyl ketone biosynthesis
PhaeoP97_01199	PWY-7046	4-coumarate degradation (anaerobic)
PhaeoP97_01199	PWY-7094	fatty acid salvage
PhaeoP97_01199	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
PhaeoP97_01199	PWY-735	jasmonic acid biosynthesis
PhaeoP97_01199	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
PhaeoP97_01199	PWY-7606	docosahexaenoate biosynthesis III (mammals)
PhaeoP97_01199	PWY-7654	(8<i>E</i>,10<i>E</i>)-dodeca-8,10-dienol biosynthesis
PhaeoP97_01199	PWY-7656	<i>Spodoptera littoralis</i> pheromone biosynthesis
PhaeoP97_01199	PWY-7726	PhaeoP97_01199
PhaeoP97_01199	PWY-7778	PhaeoP97_01199
PhaeoP97_01199	PWY-7779	PhaeoP97_01199
PhaeoP97_01210	PWY-4202	arsenate detoxification I (glutaredoxin)
PhaeoP97_01210	PWY-4621	arsenate detoxification II (glutaredoxin)
PhaeoP97_01211	PWY-5686	UMP biosynthesis
PhaeoP97_01217	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
PhaeoP97_01226	PWY-5129	sphingolipid biosynthesis (plants)
PhaeoP97_01226	PWY-7836	PhaeoP97_01226
PhaeoP97_01226	PWY-7838	PhaeoP97_01226
PhaeoP97_01226	PWY-7839	PhaeoP97_01226
PhaeoP97_01226	PWY-7841	PhaeoP97_01226
PhaeoP97_01255	PWY-7801	PhaeoP97_01255
PhaeoP97_01291	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
PhaeoP97_01292	PWY-5108	L-isoleucine biosynthesis V
PhaeoP97_01292	PWY-5132	humulone biosynthesis
PhaeoP97_01292	PWY-5133	cohumulone biosynthesis
PhaeoP97_01292	PWY-6672	<i>cis</i>-genanyl-CoA degradation
PhaeoP97_01292	PWY-7118	chitin degradation to ethanol
PhaeoP97_01292	PWY-7857	PhaeoP97_01292
PhaeoP97_01313	PWY-6531	mannitol cycle
PhaeoP97_01324	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
PhaeoP97_01324	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
PhaeoP97_01324	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
PhaeoP97_01325	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
PhaeoP97_01325	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
PhaeoP97_01338	PWY-6123	inosine-5'-phosphate biosynthesis I
PhaeoP97_01338	PWY-6124	inosine-5'-phosphate biosynthesis II
PhaeoP97_01338	PWY-7234	inosine-5'-phosphate biosynthesis III
PhaeoP97_01339	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
PhaeoP97_01339	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
PhaeoP97_01339	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
PhaeoP97_01340	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
PhaeoP97_01340	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
PhaeoP97_01340	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
PhaeoP97_01351	PWY-5392	reductive TCA cycle II
PhaeoP97_01351	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
PhaeoP97_01351	PWY-5690	TCA cycle II (plants and fungi)
PhaeoP97_01351	PWY-5913	TCA cycle VI (obligate autotrophs)
PhaeoP97_01351	PWY-6728	methylaspartate cycle
PhaeoP97_01351	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
PhaeoP97_01351	PWY-7254	TCA cycle VII (acetate-producers)
PhaeoP97_01351	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
PhaeoP97_01355	PWY-7352	daunorubicin biosynthesis
PhaeoP97_01355	PWY-7354	aclacinomycin biosynthesis
PhaeoP97_01360	PWY-4381	fatty acid biosynthesis initiation I
PhaeoP97_01366	PWY-4381	fatty acid biosynthesis initiation I
PhaeoP97_01370	PWY-4381	fatty acid biosynthesis initiation I
PhaeoP97_01379	PWY-6012	acyl carrier protein metabolism I
PhaeoP97_01379	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
PhaeoP97_01379	PWY-6289	petrobactin biosynthesis
PhaeoP97_01398	PWY-4261	glycerol degradation I
PhaeoP97_01406	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
PhaeoP97_01407	PWY-6164	3-dehydroquinate biosynthesis I
PhaeoP97_01416	PWY-2781	<i>cis</i>-zeatin biosynthesis
PhaeoP97_01420	PWY-5667	CDP-diacylglycerol biosynthesis I
PhaeoP97_01420	PWY-5981	CDP-diacylglycerol biosynthesis III
PhaeoP97_01420	PWY-7817	PhaeoP97_01420
PhaeoP97_01421	PWY-7560	methylerythritol phosphate pathway II
PhaeoP97_01426	PWY-5971	palmitate biosynthesis II (bacteria and plants)
PhaeoP97_01426	PWY-5973	<i>cis</i>-vaccenate biosynthesis
PhaeoP97_01426	PWY-5989	stearate biosynthesis II (bacteria and plants)
PhaeoP97_01426	PWY-5994	palmitate biosynthesis I (animals and fungi)
PhaeoP97_01426	PWY-6113	superpathway of mycolate biosynthesis
PhaeoP97_01426	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
PhaeoP97_01426	PWY-6519	8-amino-7-oxononanoate biosynthesis I
PhaeoP97_01426	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
PhaeoP97_01426	PWY-7663	gondoate biosynthesis (anaerobic)
PhaeoP97_01426	PWY-7664	oleate biosynthesis IV (anaerobic)
PhaeoP97_01426	PWY-7858	PhaeoP97_01426
PhaeoP97_01426	PWYG-321	mycolate biosynthesis
PhaeoP97_01431	PWY-7887	PhaeoP97_01431
PhaeoP97_01431	PWY-7892	PhaeoP97_01431
PhaeoP97_01444	PWY-5669	phosphatidylethanolamine biosynthesis I
PhaeoP97_01446	PWY-6834	spermidine biosynthesis III
PhaeoP97_01460	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
PhaeoP97_01461	PWY-5250	methanogenesis from trimethylamine
PhaeoP97_01465	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
PhaeoP97_01465	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
PhaeoP97_01468	PWY-6599	guanine and guanosine salvage II
PhaeoP97_01468	PWY-6609	adenine and adenosine salvage III
PhaeoP97_01468	PWY-6610	adenine and adenosine salvage IV
PhaeoP97_01468	PWY-6620	guanine and guanosine salvage
PhaeoP97_01472	PWY-5269	cardiolipin biosynthesis II
PhaeoP97_01472	PWY-5668	cardiolipin biosynthesis I
PhaeoP97_01472	PWY-7817	PhaeoP97_01472
PhaeoP97_01473	PWY-7560	methylerythritol phosphate pathway II
PhaeoP97_01487	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
PhaeoP97_01487	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
PhaeoP97_01502	PWY-6019	pseudouridine degradation
PhaeoP97_01506	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
PhaeoP97_01506	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
PhaeoP97_01506	PWY-6897	thiamin salvage II
PhaeoP97_01506	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
PhaeoP97_01506	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
PhaeoP97_01506	PWY-7356	thiamin salvage IV (yeast)
PhaeoP97_01506	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
PhaeoP97_01513	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
PhaeoP97_01514	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
PhaeoP97_01514	PWY-6855	chitin degradation I (archaea)
PhaeoP97_01514	PWY-6906	chitin derivatives degradation
PhaeoP97_01522	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
PhaeoP97_01522	PWY-6596	adenosine nucleotides degradation I
PhaeoP97_01522	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
PhaeoP97_01545	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
PhaeoP97_01553	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
PhaeoP97_01554	PWY-7437	protein <i>O</i>-[<i>N</i>-acetyl]-glucosylation
PhaeoP97_01561	PWY-3341	L-proline biosynthesis III
PhaeoP97_01561	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
PhaeoP97_01562	PWY-3341	L-proline biosynthesis III
PhaeoP97_01562	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
PhaeoP97_01571	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
PhaeoP97_01571	PWY-6416	quinate degradation II
PhaeoP97_01571	PWY-6707	gallate biosynthesis
PhaeoP97_01573	PWY-723	alkylnitronates degradation
PhaeoP97_01594	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
PhaeoP97_01597	PWY-6164	3-dehydroquinate biosynthesis I
PhaeoP97_01632	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
PhaeoP97_01632	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
PhaeoP97_01634	PWY-7533	gliotoxin biosynthesis
PhaeoP97_01645	PWY-31	canavanine degradation
PhaeoP97_01645	PWY-4984	urea cycle
PhaeoP97_01645	PWY-6305	putrescine biosynthesis IV
PhaeoP97_01645	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
PhaeoP97_01654	PWY-5101	L-isoleucine biosynthesis II
PhaeoP97_01654	PWY-6871	3-methylbutanol biosynthesis
PhaeoP97_01658	PWY-5250	methanogenesis from trimethylamine
PhaeoP97_01667	PWY-6891	thiazole biosynthesis II (Bacillus)
PhaeoP97_01667	PWY-6892	thiazole biosynthesis I (E. coli)
PhaeoP97_01667	PWY-7560	methylerythritol phosphate pathway II
PhaeoP97_01668	PWY-7793	PhaeoP97_01668
PhaeoP97_01683	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
PhaeoP97_01683	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
PhaeoP97_01683	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
PhaeoP97_01683	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
PhaeoP97_01683	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
PhaeoP97_01683	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
PhaeoP97_01683	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
PhaeoP97_01683	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
PhaeoP97_01687	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
PhaeoP97_01687	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
PhaeoP97_01688	PWY-5971	palmitate biosynthesis II (bacteria and plants)
PhaeoP97_01688	PWY-5973	<i>cis</i>-vaccenate biosynthesis
PhaeoP97_01688	PWY-5989	stearate biosynthesis II (bacteria and plants)
PhaeoP97_01688	PWY-6113	superpathway of mycolate biosynthesis
PhaeoP97_01688	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
PhaeoP97_01688	PWY-6519	8-amino-7-oxononanoate biosynthesis I
PhaeoP97_01688	PWY-7663	gondoate biosynthesis (anaerobic)
PhaeoP97_01688	PWY-7664	oleate biosynthesis IV (anaerobic)
PhaeoP97_01688	PWY-7858	PhaeoP97_01688
PhaeoP97_01688	PWYG-321	mycolate biosynthesis
PhaeoP97_01693	PWY-5958	acridone alkaloid biosynthesis
PhaeoP97_01693	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
PhaeoP97_01693	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
PhaeoP97_01695	PWY-5958	acridone alkaloid biosynthesis
PhaeoP97_01695	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
PhaeoP97_01695	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
PhaeoP97_01699	PWY-6823	molybdenum cofactor biosynthesis
PhaeoP97_01700	PWY-6823	molybdenum cofactor biosynthesis
PhaeoP97_01704	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
PhaeoP97_01713	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
PhaeoP97_01713	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
PhaeoP97_01714	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
PhaeoP97_01714	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
PhaeoP97_01719	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
PhaeoP97_01719	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
PhaeoP97_01719	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
PhaeoP97_01725	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
PhaeoP97_01725	PWY-5723	Rubisco shunt
PhaeoP97_01725	PWY-6891	thiazole biosynthesis II (Bacillus)
PhaeoP97_01725	PWY-6892	thiazole biosynthesis I (E. coli)
PhaeoP97_01725	PWY-6901	superpathway of glucose and xylose degradation
PhaeoP97_01725	PWY-7560	methylerythritol phosphate pathway II
PhaeoP97_01728	PWY-1042	glycolysis IV (plant cytosol)
PhaeoP97_01728	PWY-5484	glycolysis II (from fructose 6-phosphate)
PhaeoP97_01728	PWY-6901	superpathway of glucose and xylose degradation
PhaeoP97_01728	PWY-7003	glycerol degradation to butanol
PhaeoP97_01730	PWY-7851	PhaeoP97_01730
PhaeoP97_01733	PWY-5642	2,4-dinitrotoluene degradation
PhaeoP97_01738	PWY-7437	protein <i>O</i>-[<i>N</i>-acetyl]-glucosylation
PhaeoP97_01760	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
PhaeoP97_01760	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
PhaeoP97_01763	PWY-6700	queuosine biosynthesis
PhaeoP97_01774	PWY-1042	glycolysis IV (plant cytosol)
PhaeoP97_01774	PWY-5484	glycolysis II (from fructose 6-phosphate)
PhaeoP97_01774	PWY-6886	1-butanol autotrophic biosynthesis
PhaeoP97_01774	PWY-6901	superpathway of glucose and xylose degradation
PhaeoP97_01774	PWY-7003	glycerol degradation to butanol
PhaeoP97_01781	PWY-6936	seleno-amino acid biosynthesis
PhaeoP97_01781	PWY-7274	D-cycloserine biosynthesis
PhaeoP97_01781	PWY-7870	PhaeoP97_01781
PhaeoP97_01805	PWY-5367	petroselinate biosynthesis
PhaeoP97_01805	PWY-5971	palmitate biosynthesis II (bacteria and plants)
PhaeoP97_01805	PWY-5973	<i>cis</i>-vaccenate biosynthesis
PhaeoP97_01805	PWY-5989	stearate biosynthesis II (bacteria and plants)
PhaeoP97_01805	PWY-5994	palmitate biosynthesis I (animals and fungi)
PhaeoP97_01805	PWY-6113	superpathway of mycolate biosynthesis
PhaeoP97_01805	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
PhaeoP97_01805	PWY-6519	8-amino-7-oxononanoate biosynthesis I
PhaeoP97_01805	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
PhaeoP97_01805	PWY-7663	gondoate biosynthesis (anaerobic)
PhaeoP97_01805	PWY-7664	oleate biosynthesis IV (anaerobic)
PhaeoP97_01805	PWY-7858	PhaeoP97_01805
PhaeoP97_01805	PWYG-321	mycolate biosynthesis
PhaeoP97_01806	PWY-4381	fatty acid biosynthesis initiation I
PhaeoP97_01806	PWY-6799	fatty acid biosynthesis (plant mitochondria)
PhaeoP97_01806	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
PhaeoP97_01851	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
PhaeoP97_01851	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
PhaeoP97_01906	PWY-6938	NADH repair
PhaeoP97_01908	PWY-381	nitrate reduction II (assimilatory)
PhaeoP97_01908	PWY-5675	nitrate reduction V (assimilatory)
PhaeoP97_01908	PWY-6549	L-glutamine biosynthesis III
PhaeoP97_01908	PWY-6963	ammonia assimilation cycle I
PhaeoP97_01908	PWY-6964	ammonia assimilation cycle II
PhaeoP97_01915	PWY-6123	inosine-5'-phosphate biosynthesis I
PhaeoP97_01915	PWY-6124	inosine-5'-phosphate biosynthesis II
PhaeoP97_01915	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
PhaeoP97_01915	PWY-7234	inosine-5'-phosphate biosynthesis III
PhaeoP97_01932	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
PhaeoP97_01946	PWY-6854	ethylene biosynthesis III (microbes)
PhaeoP97_01949	PWY-3661	glycine betaine degradation I
PhaeoP97_01949	PWY-4722	creatinine degradation II
PhaeoP97_01950	PWY-3661	glycine betaine degradation I
PhaeoP97_01950	PWY-4722	creatinine degradation II
PhaeoP97_01951	PWY-3661	glycine betaine degradation I
PhaeoP97_01951	PWY-4722	creatinine degradation II
PhaeoP97_01952	PWY-3661	glycine betaine degradation I
PhaeoP97_01952	PWY-4722	creatinine degradation II
PhaeoP97_01970	PWY-5659	GDP-mannose biosynthesis
PhaeoP97_01970	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
PhaeoP97_01974	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
PhaeoP97_01974	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
PhaeoP97_01974	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
PhaeoP97_01974	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
PhaeoP97_01974	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
PhaeoP97_01974	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
PhaeoP97_01974	PWY-7205	CMP phosphorylation
PhaeoP97_01974	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
PhaeoP97_01974	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
PhaeoP97_01974	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
PhaeoP97_01974	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
PhaeoP97_01974	PWY-7224	purine deoxyribonucleosides salvage
PhaeoP97_01974	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
PhaeoP97_01974	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
PhaeoP97_01991	PWY-40	putrescine biosynthesis I
PhaeoP97_01991	PWY-6305	putrescine biosynthesis IV
PhaeoP97_01992	PWY-40	putrescine biosynthesis I
PhaeoP97_01992	PWY-6305	putrescine biosynthesis IV
PhaeoP97_02015	PWY-7802	PhaeoP97_02015
PhaeoP97_02022	PWY-5101	L-isoleucine biosynthesis II
PhaeoP97_02022	PWY-5103	L-isoleucine biosynthesis III
PhaeoP97_02022	PWY-5104	L-isoleucine biosynthesis IV
PhaeoP97_02022	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
PhaeoP97_02022	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
PhaeoP97_02022	PWY-6389	(<i>S</i>)-acetoin biosynthesis
PhaeoP97_02022	PWY-7111	pyruvate fermentation to isobutanol (engineered)
PhaeoP97_02023	PWY-5101	L-isoleucine biosynthesis II
PhaeoP97_02023	PWY-5103	L-isoleucine biosynthesis III
PhaeoP97_02023	PWY-5104	L-isoleucine biosynthesis IV
PhaeoP97_02023	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
PhaeoP97_02023	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
PhaeoP97_02023	PWY-6389	(<i>S</i>)-acetoin biosynthesis
PhaeoP97_02023	PWY-7111	pyruvate fermentation to isobutanol (engineered)
PhaeoP97_02027	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
PhaeoP97_02029	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
PhaeoP97_02029	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
PhaeoP97_02029	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
PhaeoP97_02029	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
PhaeoP97_02036	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
PhaeoP97_02036	PWY-7536	2-amino-3-hydroxycyclopent-2-enone biosynthesis
PhaeoP97_02053	PWY-6700	queuosine biosynthesis
PhaeoP97_02061	PWY-1042	glycolysis IV (plant cytosol)
PhaeoP97_02061	PWY-5484	glycolysis II (from fructose 6-phosphate)
PhaeoP97_02061	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
PhaeoP97_02061	PWY-7003	glycerol degradation to butanol
PhaeoP97_02070	PWY-5194	siroheme biosynthesis
PhaeoP97_02070	PWY-5196	factor 430 biosynthesis
PhaeoP97_02070	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
PhaeoP97_02072	PWY-6683	sulfate reduction III (assimilatory)
PhaeoP97_02081	PWY-7799	PhaeoP97_02081
PhaeoP97_02081	PWY-7800	PhaeoP97_02081
PhaeoP97_02082	PWY-3841	folate transformations II
PhaeoP97_02082	PWY-6614	tetrahydrofolate biosynthesis
PhaeoP97_02083	PWY-3841	folate transformations II
PhaeoP97_02083	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
PhaeoP97_02083	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
PhaeoP97_02083	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
PhaeoP97_02083	PWY-7199	pyrimidine deoxyribonucleosides salvage
PhaeoP97_02083	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
PhaeoP97_02086	PWY-5386	methylglyoxal degradation I
PhaeoP97_02126	PWY-4381	fatty acid biosynthesis initiation I
PhaeoP97_02126	PWY-5743	3-hydroxypropanoate cycle
PhaeoP97_02126	PWY-5744	glyoxylate assimilation
PhaeoP97_02126	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
PhaeoP97_02126	PWY-6722	candicidin biosynthesis
PhaeoP97_02133	PWY-3722	glycine betaine biosynthesis II (Gram-positive bacteria)
PhaeoP97_02133	PWY-7494	choline degradation IV
PhaeoP97_02134	PWY-3722	glycine betaine biosynthesis II (Gram-positive bacteria)
PhaeoP97_02134	PWY-7494	choline degradation IV
PhaeoP97_02151	PWY-5497	purine nucleobases degradation II (anaerobic)
PhaeoP97_02151	PWY-6606	guanosine nucleotides degradation II
PhaeoP97_02151	PWY-6608	guanosine nucleotides degradation III
PhaeoP97_02151	PWY-7442	drosopterin and aurodrosopterin biosynthesis
PhaeoP97_02166	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
PhaeoP97_02204	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
PhaeoP97_02220	PWY-2941	L-lysine biosynthesis II
PhaeoP97_02220	PWY-2942	L-lysine biosynthesis III
PhaeoP97_02220	PWY-5097	L-lysine biosynthesis VI
PhaeoP97_02220	PWY-6160	3-dehydroquinate biosynthesis II (archaea)
PhaeoP97_02220	PWY-6559	spermidine biosynthesis II
PhaeoP97_02220	PWY-6562	norspermidine biosynthesis
PhaeoP97_02220	PWY-7153	grixazone biosynthesis
PhaeoP97_02220	PWY-7977	PhaeoP97_02220
PhaeoP97_02223	PWY-5663	tetrahydrobiopterin biosynthesis I
PhaeoP97_02223	PWY-5664	tetrahydrobiopterin biosynthesis II
PhaeoP97_02223	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
PhaeoP97_02223	PWY-6703	preQ<sub>0</sub> biosynthesis
PhaeoP97_02223	PWY-6983	tetrahydrobiopterin biosynthesis III
PhaeoP97_02223	PWY-7442	drosopterin and aurodrosopterin biosynthesis
PhaeoP97_02223	PWY-7852	PhaeoP97_02223
PhaeoP97_02234	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
PhaeoP97_02234	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
PhaeoP97_02234	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
PhaeoP97_02243	PWY-4081	glutathione redox reactions I
PhaeoP97_02245	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
PhaeoP97_02245	PWY-5723	Rubisco shunt
PhaeoP97_02250	PWY-6898	thiamin salvage III
PhaeoP97_02250	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
PhaeoP97_02250	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
PhaeoP97_02250	PWY-7356	thiamin salvage IV (yeast)
PhaeoP97_02253	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
PhaeoP97_02254	PWY-5025	indole-3-acetate biosynthesis IV (bacteria)
PhaeoP97_02254	PWY-581	indole-3-acetate biosynthesis II
PhaeoP97_02254	PWY-7308	acrylonitrile degradation I
PhaeoP97_02255	PWY-5025	indole-3-acetate biosynthesis IV (bacteria)
PhaeoP97_02255	PWY-581	indole-3-acetate biosynthesis II
PhaeoP97_02255	PWY-7308	acrylonitrile degradation I
PhaeoP97_02256	PWY-5025	indole-3-acetate biosynthesis IV (bacteria)
PhaeoP97_02256	PWY-581	indole-3-acetate biosynthesis II
PhaeoP97_02256	PWY-7308	acrylonitrile degradation I
PhaeoP97_02258	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
PhaeoP97_02258	PWY-7177	UTP and CTP dephosphorylation II
PhaeoP97_02258	PWY-7185	UTP and CTP dephosphorylation I
PhaeoP97_02259	PWY-1042	glycolysis IV (plant cytosol)
PhaeoP97_02259	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
PhaeoP97_02259	PWY-5484	glycolysis II (from fructose 6-phosphate)
PhaeoP97_02259	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
PhaeoP97_02259	PWY-7385	1,3-propanediol biosynthesis (engineered)
PhaeoP97_02266	PWY-6832	2-aminoethylphosphonate degradation II
PhaeoP97_02293	PWY-4981	L-proline biosynthesis II (from arginine)
PhaeoP97_02293	PWY-4984	urea cycle
PhaeoP97_02293	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
PhaeoP97_02304	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
PhaeoP97_02304	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
PhaeoP97_02305	PWY-6749	CMP-legionaminate biosynthesis I
PhaeoP97_02319	PWY-5741	ethylmalonyl-CoA pathway
PhaeoP97_02319	PWY-5743	3-hydroxypropanoate cycle
PhaeoP97_02319	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
PhaeoP97_02319	PWY-6728	methylaspartate cycle
PhaeoP97_02319	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
PhaeoP97_02319	PWY-7854	PhaeoP97_02319
PhaeoP97_02326	PWY-5958	acridone alkaloid biosynthesis
PhaeoP97_02326	PWY-6543	4-aminobenzoate biosynthesis
PhaeoP97_02326	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
PhaeoP97_02326	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
PhaeoP97_02327	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
PhaeoP97_02327	PWY-5686	UMP biosynthesis
PhaeoP97_02327	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
PhaeoP97_02327	PWY-7790	PhaeoP97_02327
PhaeoP97_02327	PWY-7791	PhaeoP97_02327
PhaeoP97_02329	PWY-1622	formaldehyde assimilation I (serine pathway)
PhaeoP97_02329	PWY-181	photorespiration
PhaeoP97_02329	PWY-2161	folate polyglutamylation
PhaeoP97_02329	PWY-2201	folate transformations I
PhaeoP97_02329	PWY-3661	glycine betaine degradation I
PhaeoP97_02329	PWY-3661-1	glycine betaine degradation II (mammalian)
PhaeoP97_02329	PWY-3841	folate transformations II
PhaeoP97_02329	PWY-5497	purine nucleobases degradation II (anaerobic)
PhaeoP97_02334	PWY-4381	fatty acid biosynthesis initiation I
PhaeoP97_02338	PWY-7199	pyrimidine deoxyribonucleosides salvage
PhaeoP97_02341	PWY-3341	L-proline biosynthesis III
PhaeoP97_02341	PWY-4981	L-proline biosynthesis II (from arginine)
PhaeoP97_02341	PWY-6344	L-ornithine degradation II (Stickland reaction)
PhaeoP97_02351	PWY-5278	sulfite oxidation III
PhaeoP97_02351	PWY-5340	sulfate activation for sulfonation
PhaeoP97_02351	PWY-6683	sulfate reduction III (assimilatory)
PhaeoP97_02351	PWY-6932	selenate reduction
PhaeoP97_02357	PWY-6123	inosine-5'-phosphate biosynthesis I
PhaeoP97_02357	PWY-7234	inosine-5'-phosphate biosynthesis III
PhaeoP97_02359	PWY-7399	methylphosphonate degradation II
PhaeoP97_02359	PWY-7805	PhaeoP97_02359
PhaeoP97_02359	PWY-7807	PhaeoP97_02359
PhaeoP97_02365	PWY-7805	PhaeoP97_02365
PhaeoP97_02365	PWY-7807	PhaeoP97_02365
PhaeoP97_02369	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
PhaeoP97_02369	PWY-6167	flavin biosynthesis II (archaea)
PhaeoP97_02369	PWY-6168	flavin biosynthesis III (fungi)
PhaeoP97_02369	PWY-7863	PhaeoP97_02369
PhaeoP97_02376	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
PhaeoP97_02379	PWY-7980	PhaeoP97_02379
PhaeoP97_02381	PWY-7980	PhaeoP97_02381
PhaeoP97_02384	PWY-5386	methylglyoxal degradation I
PhaeoP97_02390	PWY-7942	PhaeoP97_02390
PhaeoP97_02393	PWY-7303	3-dimethylallyl-4-hydroxybenzoate biosynthesis
PhaeoP97_02416	PWY-1881	formate oxidation to CO<sub>2</sub>
PhaeoP97_02416	PWY-5497	purine nucleobases degradation II (anaerobic)
PhaeoP97_02416	PWY-6696	oxalate degradation III
PhaeoP97_02416	PWY-7985	PhaeoP97_02416
PhaeoP97_02434	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
PhaeoP97_02434	PWY-6269	adenosylcobalamin salvage from cobinamide II
PhaeoP97_02434	PWY-7964	PhaeoP97_02434
PhaeoP97_02434	PWY-7965	PhaeoP97_02434
PhaeoP97_02434	PWY-7966	PhaeoP97_02434
PhaeoP97_02434	PWY-7967	PhaeoP97_02434
PhaeoP97_02434	PWY-7968	PhaeoP97_02434
PhaeoP97_02434	PWY-7969	PhaeoP97_02434
PhaeoP97_02434	PWY-7970	PhaeoP97_02434
PhaeoP97_02435	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
PhaeoP97_02435	PWY-6269	adenosylcobalamin salvage from cobinamide II
PhaeoP97_02435	PWY-7961	PhaeoP97_02435
PhaeoP97_02435	PWY-7963	PhaeoP97_02435
PhaeoP97_02435	PWY-7964	PhaeoP97_02435
PhaeoP97_02435	PWY-7965	PhaeoP97_02435
PhaeoP97_02435	PWY-7966	PhaeoP97_02435
PhaeoP97_02435	PWY-7967	PhaeoP97_02435
PhaeoP97_02435	PWY-7968	PhaeoP97_02435
PhaeoP97_02435	PWY-7969	PhaeoP97_02435
PhaeoP97_02435	PWY-7970	PhaeoP97_02435
PhaeoP97_02435	PWY-7975	PhaeoP97_02435
PhaeoP97_02453	PWY-6527	stachyose degradation
PhaeoP97_02454	PWY-5101	L-isoleucine biosynthesis II
PhaeoP97_02454	PWY-5103	L-isoleucine biosynthesis III
PhaeoP97_02454	PWY-5104	L-isoleucine biosynthesis IV
PhaeoP97_02454	PWY-7111	pyruvate fermentation to isobutanol (engineered)
PhaeoP97_02456	PWY-7130	L-glucose degradation
PhaeoP97_02457	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
PhaeoP97_02457	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
PhaeoP97_02457	PWY-7242	D-fructuronate degradation
PhaeoP97_02457	PWY-7310	D-glucosaminate degradation
PhaeoP97_02457	PWY-7562	3,6-anhydro-&alpha;-L-galactopyranose degradation
PhaeoP97_02459	PWY-6807	xyloglucan degradation II (exoglucanase)
PhaeoP97_02469	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
PhaeoP97_02498	PWY-1042	glycolysis IV (plant cytosol)
PhaeoP97_02498	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
PhaeoP97_02498	PWY-5484	glycolysis II (from fructose 6-phosphate)
PhaeoP97_02498	PWY-5723	Rubisco shunt
PhaeoP97_02498	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
PhaeoP97_02498	PWY-6886	1-butanol autotrophic biosynthesis
PhaeoP97_02498	PWY-6901	superpathway of glucose and xylose degradation
PhaeoP97_02498	PWY-7003	glycerol degradation to butanol
PhaeoP97_02498	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
PhaeoP97_02498	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
PhaeoP97_02501	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
PhaeoP97_02501	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
PhaeoP97_02501	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
PhaeoP97_02501	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
PhaeoP97_02501	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
PhaeoP97_02501	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
PhaeoP97_02501	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
PhaeoP97_02501	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
PhaeoP97_02518	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
PhaeoP97_02518	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
PhaeoP97_02519	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
PhaeoP97_02519	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
PhaeoP97_02519	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
PhaeoP97_02519	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
PhaeoP97_02519	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
PhaeoP97_02519	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
PhaeoP97_02536	PWY-3121	linamarin degradation
PhaeoP97_02536	PWY-5176	coumarin biosynthesis (via 2-coumarate)
PhaeoP97_02536	PWY-6002	lotaustralin degradation
PhaeoP97_02536	PWY-6788	cellulose degradation II (fungi)
PhaeoP97_02536	PWY-7091	linustatin bioactivation
PhaeoP97_02536	PWY-7092	neolinustatin bioactivation
PhaeoP97_02536	PWY-7913	PhaeoP97_02536
PhaeoP97_02537	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
PhaeoP97_02561	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
PhaeoP97_02567	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
PhaeoP97_02569	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
PhaeoP97_02569	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
PhaeoP97_02571	PWY-5381	pyridine nucleotide cycling (plants)
PhaeoP97_02571	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
PhaeoP97_02571	PWY-7761	PhaeoP97_02571
PhaeoP97_02587	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
PhaeoP97_02589	PWY-5381	pyridine nucleotide cycling (plants)
PhaeoP97_02589	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
PhaeoP97_02589	PWY-7761	PhaeoP97_02589
PhaeoP97_02591	PWY-6871	3-methylbutanol biosynthesis
PhaeoP97_02596	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
PhaeoP97_02596	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
PhaeoP97_02597	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
PhaeoP97_02597	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
PhaeoP97_02597	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
PhaeoP97_02597	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
PhaeoP97_02607	PWY-7851	PhaeoP97_02607
PhaeoP97_02610	PWY-6269	adenosylcobalamin salvage from cobinamide II
PhaeoP97_02610	PWY-7962	PhaeoP97_02610
PhaeoP97_02610	PWY-7971	PhaeoP97_02610
PhaeoP97_02610	PWY-7972	PhaeoP97_02610
PhaeoP97_02624	PWY-1341	phenylacetate degradation II (anaerobic)
PhaeoP97_02624	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
PhaeoP97_02624	PWY-7716	PhaeoP97_02624
PhaeoP97_02664	PWY-381	nitrate reduction II (assimilatory)
PhaeoP97_02664	PWY-5675	nitrate reduction V (assimilatory)
PhaeoP97_02664	PWY-6549	L-glutamine biosynthesis III
PhaeoP97_02664	PWY-6963	ammonia assimilation cycle I
PhaeoP97_02664	PWY-6964	ammonia assimilation cycle II
PhaeoP97_02677	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
PhaeoP97_02677	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
PhaeoP97_02680	PWY-3781	aerobic respiration I (cytochrome c)
PhaeoP97_02680	PWY-4521	arsenite oxidation I (respiratory)
PhaeoP97_02680	PWY-6692	Fe(II) oxidation
PhaeoP97_02680	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
PhaeoP97_02683	PWY-7303	3-dimethylallyl-4-hydroxybenzoate biosynthesis
PhaeoP97_02685	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
PhaeoP97_02685	PWY-5686	UMP biosynthesis
PhaeoP97_02685	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
PhaeoP97_02685	PWY-7790	PhaeoP97_02685
PhaeoP97_02685	PWY-7791	PhaeoP97_02685
PhaeoP97_02695	PWY-5103	L-isoleucine biosynthesis III
PhaeoP97_02695	PWY-7111	pyruvate fermentation to isobutanol (engineered)
PhaeoP97_02698	PWY-6749	CMP-legionaminate biosynthesis I
PhaeoP97_02699	PWY-6614	tetrahydrofolate biosynthesis
PhaeoP97_02700	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
PhaeoP97_02700	PWY-6148	tetrahydromethanopterin biosynthesis
PhaeoP97_02700	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
PhaeoP97_02700	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
PhaeoP97_02702	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
PhaeoP97_02702	PWY-6549	L-glutamine biosynthesis III
PhaeoP97_02702	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
PhaeoP97_02702	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
PhaeoP97_02718	PWY-6605	adenine and adenosine salvage II
PhaeoP97_02718	PWY-6610	adenine and adenosine salvage IV
PhaeoP97_02718	PWY-7805	PhaeoP97_02718
PhaeoP97_02718	PWY-7807	PhaeoP97_02718
PhaeoP97_02754	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
PhaeoP97_02754	PWY-2201	folate transformations I
PhaeoP97_02754	PWY-3841	folate transformations II
PhaeoP97_02754	PWY-5030	L-histidine degradation III
PhaeoP97_02754	PWY-5497	purine nucleobases degradation II (anaerobic)
PhaeoP97_02754	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
PhaeoP97_02754	PWY-7909	PhaeoP97_02754
PhaeoP97_02755	PWY-3461	L-tyrosine biosynthesis II
PhaeoP97_02755	PWY-3462	L-phenylalanine biosynthesis II
PhaeoP97_02755	PWY-6120	L-tyrosine biosynthesis III
PhaeoP97_02755	PWY-6406	salicylate biosynthesis I
PhaeoP97_02755	PWY-6627	salinosporamide A biosynthesis
PhaeoP97_02755	PWY-7626	bacilysin biosynthesis
PhaeoP97_02756	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
PhaeoP97_02756	PWY-2161	folate polyglutamylation
PhaeoP97_02756	PWY-2201	folate transformations I
PhaeoP97_02756	PWY-3841	folate transformations II
PhaeoP97_02778	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
PhaeoP97_02778	PWY-5723	Rubisco shunt
PhaeoP97_02782	PWY-6826	phosphatidylcholine biosynthesis VI
PhaeoP97_02792	PWY-6700	queuosine biosynthesis
PhaeoP97_02793	PWY-6703	preQ<sub>0</sub> biosynthesis
PhaeoP97_02795	PWY-6703	preQ<sub>0</sub> biosynthesis
PhaeoP97_02798	PWY-381	nitrate reduction II (assimilatory)
PhaeoP97_02798	PWY-5675	nitrate reduction V (assimilatory)
PhaeoP97_02798	PWY-6549	L-glutamine biosynthesis III
PhaeoP97_02798	PWY-6963	ammonia assimilation cycle I
PhaeoP97_02798	PWY-6964	ammonia assimilation cycle II
PhaeoP97_02800	PWY-5692	allantoin degradation to glyoxylate II
PhaeoP97_02800	PWY-5698	allantoin degradation to ureidoglycolate II (ammonia producing)
PhaeoP97_02804	PWY-5694	allantoin degradation to glyoxylate I
PhaeoP97_02804	PWY-5705	allantoin degradation to glyoxylate III
PhaeoP97_02805	PWY-5691	urate degradation to allantoin I
PhaeoP97_02805	PWY-7394	urate degradation to allantoin II
PhaeoP97_02805	PWY-7849	PhaeoP97_02805
PhaeoP97_02806	PWY-5691	urate degradation to allantoin I
PhaeoP97_02806	PWY-7394	urate degradation to allantoin II
PhaeoP97_02806	PWY-7849	PhaeoP97_02806
PhaeoP97_02814	PWY-2722	trehalose degradation IV
PhaeoP97_02814	PWY-2723	trehalose degradation V
PhaeoP97_02814	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
PhaeoP97_02814	PWY-5661	GDP-glucose biosynthesis
PhaeoP97_02814	PWY-621	sucrose degradation III (sucrose invertase)
PhaeoP97_02814	PWY-7238	sucrose biosynthesis II
PhaeoP97_02814	PWY-7385	1,3-propanediol biosynthesis (engineered)
PhaeoP97_02822	PWY-6012	acyl carrier protein metabolism I
PhaeoP97_02822	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
PhaeoP97_02822	PWY-6289	petrobactin biosynthesis
PhaeoP97_02831	PWY-7130	L-glucose degradation
PhaeoP97_02848	PWY-5901	2,3-dihydroxybenzoate biosynthesis
PhaeoP97_02863	PWY-6308	L-cysteine biosynthesis II (tRNA-dependent)
PhaeoP97_02872	PWY-7205	CMP phosphorylation
PhaeoP97_02873	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
PhaeoP97_02876	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
PhaeoP97_02876	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
PhaeoP97_02889	PWY-5971	palmitate biosynthesis II (bacteria and plants)
PhaeoP97_02889	PWY-5973	<i>cis</i>-vaccenate biosynthesis
PhaeoP97_02889	PWY-5989	stearate biosynthesis II (bacteria and plants)
PhaeoP97_02889	PWY-5994	palmitate biosynthesis I (animals and fungi)
PhaeoP97_02889	PWY-6113	superpathway of mycolate biosynthesis
PhaeoP97_02889	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
PhaeoP97_02889	PWY-6519	8-amino-7-oxononanoate biosynthesis I
PhaeoP97_02889	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
PhaeoP97_02889	PWY-7663	gondoate biosynthesis (anaerobic)
PhaeoP97_02889	PWY-7664	oleate biosynthesis IV (anaerobic)
PhaeoP97_02889	PWY-7858	PhaeoP97_02889
PhaeoP97_02889	PWYG-321	mycolate biosynthesis
PhaeoP97_02891	PWY-5971	palmitate biosynthesis II (bacteria and plants)
PhaeoP97_02891	PWY-5973	<i>cis</i>-vaccenate biosynthesis
PhaeoP97_02891	PWY-5989	stearate biosynthesis II (bacteria and plants)
PhaeoP97_02891	PWY-6113	superpathway of mycolate biosynthesis
PhaeoP97_02891	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
PhaeoP97_02891	PWY-6519	8-amino-7-oxononanoate biosynthesis I
PhaeoP97_02891	PWY-7663	gondoate biosynthesis (anaerobic)
PhaeoP97_02891	PWY-7664	oleate biosynthesis IV (anaerobic)
PhaeoP97_02891	PWY-7858	PhaeoP97_02891
PhaeoP97_02891	PWYG-321	mycolate biosynthesis
PhaeoP97_02892	PWY-723	alkylnitronates degradation
PhaeoP97_02894	PWY-7425	2-chloroacrylate degradation I
PhaeoP97_02898	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
PhaeoP97_02900	PWY-6123	inosine-5'-phosphate biosynthesis I
PhaeoP97_02900	PWY-6124	inosine-5'-phosphate biosynthesis II
PhaeoP97_02900	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
PhaeoP97_02900	PWY-7234	inosine-5'-phosphate biosynthesis III
PhaeoP97_02916	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
PhaeoP97_02916	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
PhaeoP97_02916	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
PhaeoP97_02916	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
PhaeoP97_02920	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
PhaeoP97_02920	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
PhaeoP97_02920	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
PhaeoP97_02920	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
PhaeoP97_02923	PWY-7399	methylphosphonate degradation II
PhaeoP97_02923	PWY-7805	PhaeoP97_02923
PhaeoP97_02923	PWY-7807	PhaeoP97_02923
PhaeoP97_02924	PWY-7805	PhaeoP97_02924
PhaeoP97_02924	PWY-7807	PhaeoP97_02924
PhaeoP97_02925	PWY-7805	PhaeoP97_02925
PhaeoP97_02925	PWY-7807	PhaeoP97_02925
PhaeoP97_02926	PWY-7399	methylphosphonate degradation II
PhaeoP97_02926	PWY-7805	PhaeoP97_02926
PhaeoP97_02926	PWY-7807	PhaeoP97_02926
PhaeoP97_02928	PWY-7399	methylphosphonate degradation II
PhaeoP97_02928	PWY-7805	PhaeoP97_02928
PhaeoP97_02928	PWY-7807	PhaeoP97_02928
PhaeoP97_02932	PWY-7399	methylphosphonate degradation II
PhaeoP97_02932	PWY-7805	PhaeoP97_02932
PhaeoP97_02932	PWY-7807	PhaeoP97_02932
PhaeoP97_02939	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
PhaeoP97_02939	PWY-5723	Rubisco shunt
PhaeoP97_02945	PWY-1361	benzoyl-CoA degradation I (aerobic)
PhaeoP97_02945	PWY-5109	2-methylbutanoate biosynthesis
PhaeoP97_02945	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
PhaeoP97_02945	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
PhaeoP97_02945	PWY-5177	glutaryl-CoA degradation
PhaeoP97_02945	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
PhaeoP97_02945	PWY-6435	4-hydroxybenzoate biosynthesis V
PhaeoP97_02945	PWY-6583	pyruvate fermentation to butanol I
PhaeoP97_02945	PWY-6863	pyruvate fermentation to hexanol
PhaeoP97_02945	PWY-6883	pyruvate fermentation to butanol II
PhaeoP97_02945	PWY-6944	androstenedione degradation
PhaeoP97_02945	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
PhaeoP97_02945	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
PhaeoP97_02945	PWY-7007	methyl ketone biosynthesis
PhaeoP97_02945	PWY-7046	4-coumarate degradation (anaerobic)
PhaeoP97_02945	PWY-7094	fatty acid salvage
PhaeoP97_02945	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
PhaeoP97_02945	PWY-735	jasmonic acid biosynthesis
PhaeoP97_02945	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
PhaeoP97_02945	PWY-7606	docosahexaenoate biosynthesis III (mammals)
PhaeoP97_02945	PWY-7654	(8<i>E</i>,10<i>E</i>)-dodeca-8,10-dienol biosynthesis
PhaeoP97_02945	PWY-7656	<i>Spodoptera littoralis</i> pheromone biosynthesis
PhaeoP97_02945	PWY-7726	PhaeoP97_02945
PhaeoP97_02945	PWY-7778	PhaeoP97_02945
PhaeoP97_02945	PWY-7779	PhaeoP97_02945
PhaeoP97_02947	PWY-1361	benzoyl-CoA degradation I (aerobic)
PhaeoP97_02947	PWY-2361	3-oxoadipate degradation
PhaeoP97_02947	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
PhaeoP97_02967	PWY-6157	autoinducer AI-1 biosynthesis
PhaeoP97_02973	PWY-4202	arsenate detoxification I (glutaredoxin)
PhaeoP97_02973	PWY-5532	adenosine nucleotides degradation IV
PhaeoP97_02973	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
PhaeoP97_02973	PWY-6608	guanosine nucleotides degradation III
PhaeoP97_02973	PWY-6609	adenine and adenosine salvage III
PhaeoP97_02973	PWY-6611	adenine and adenosine salvage V
PhaeoP97_02973	PWY-6620	guanine and guanosine salvage
PhaeoP97_02973	PWY-6627	salinosporamide A biosynthesis
PhaeoP97_02973	PWY-6644	fluoroacetate and fluorothreonine biosynthesis
PhaeoP97_02973	PWY-7179	purine deoxyribonucleosides degradation I
PhaeoP97_02973	PWY-7179-1	purine deoxyribonucleosides degradation
PhaeoP97_02978	PWY-3781	aerobic respiration I (cytochrome c)
PhaeoP97_02978	PWY-4302	aerobic respiration III (alternative oxidase pathway)
PhaeoP97_02978	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
PhaeoP97_02978	PWY-5690	TCA cycle II (plants and fungi)
PhaeoP97_02978	PWY-6728	methylaspartate cycle
PhaeoP97_02978	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
PhaeoP97_02978	PWY-7254	TCA cycle VII (acetate-producers)
PhaeoP97_02978	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
PhaeoP97_02980	PWY-3781	aerobic respiration I (cytochrome c)
PhaeoP97_02980	PWY-4302	aerobic respiration III (alternative oxidase pathway)
PhaeoP97_02980	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
PhaeoP97_02980	PWY-5690	TCA cycle II (plants and fungi)
PhaeoP97_02980	PWY-6728	methylaspartate cycle
PhaeoP97_02980	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
PhaeoP97_02980	PWY-7254	TCA cycle VII (acetate-producers)
PhaeoP97_02980	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
PhaeoP97_02985	PWY-5741	ethylmalonyl-CoA pathway
PhaeoP97_02985	PWY-5744	glyoxylate assimilation
PhaeoP97_02985	PWY-6728	methylaspartate cycle
PhaeoP97_02985	PWY-7854	PhaeoP97_02985
PhaeoP97_02991	PWY-1622	formaldehyde assimilation I (serine pathway)
PhaeoP97_02991	PWY-5392	reductive TCA cycle II
PhaeoP97_02991	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
PhaeoP97_02991	PWY-5690	TCA cycle II (plants and fungi)
PhaeoP97_02991	PWY-5913	TCA cycle VI (obligate autotrophs)
PhaeoP97_02991	PWY-6728	methylaspartate cycle
PhaeoP97_02991	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
PhaeoP97_02991	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
PhaeoP97_02991	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
PhaeoP97_02993	PWY-5392	reductive TCA cycle II
PhaeoP97_02993	PWY-5537	pyruvate fermentation to acetate V
PhaeoP97_02993	PWY-5538	pyruvate fermentation to acetate VI
PhaeoP97_02993	PWY-5690	TCA cycle II (plants and fungi)
PhaeoP97_02993	PWY-5913	TCA cycle VI (obligate autotrophs)
PhaeoP97_02993	PWY-6728	methylaspartate cycle
PhaeoP97_02993	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
PhaeoP97_02993	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
PhaeoP97_02995	PWY-5392	reductive TCA cycle II
PhaeoP97_02995	PWY-5537	pyruvate fermentation to acetate V
PhaeoP97_02995	PWY-5538	pyruvate fermentation to acetate VI
PhaeoP97_02995	PWY-5690	TCA cycle II (plants and fungi)
PhaeoP97_02995	PWY-5913	TCA cycle VI (obligate autotrophs)
PhaeoP97_02995	PWY-6728	methylaspartate cycle
PhaeoP97_02995	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
PhaeoP97_02995	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
PhaeoP97_02996	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
PhaeoP97_02997	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
PhaeoP97_03001	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
PhaeoP97_03001	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
PhaeoP97_03003	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
PhaeoP97_03003	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
PhaeoP97_03009	PWY-2941	L-lysine biosynthesis II
PhaeoP97_03009	PWY-2942	L-lysine biosynthesis III
PhaeoP97_03009	PWY-5097	L-lysine biosynthesis VI
PhaeoP97_03011	PWY-4983	L-citrulline-nitric oxide cycle
PhaeoP97_03011	PWY-4984	urea cycle
PhaeoP97_03011	PWY-5	canavanine biosynthesis
PhaeoP97_03011	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
PhaeoP97_03011	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
PhaeoP97_03017	PWY-5676	acetyl-CoA fermentation to butanoate II
PhaeoP97_03017	PWY-5741	ethylmalonyl-CoA pathway
PhaeoP97_03017	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
PhaeoP97_03017	PWY-7948	PhaeoP97_03017
PhaeoP97_03025	PWY-7560	methylerythritol phosphate pathway II
PhaeoP97_03033	PWY-6823	molybdenum cofactor biosynthesis
PhaeoP97_03036	PWY-5964	guanylyl molybdenum cofactor biosynthesis
PhaeoP97_03036	PWY-7639	bis(guanylyl molybdenum cofactor) biosynthesis
PhaeoP97_03041	PWY-3781	aerobic respiration I (cytochrome c)
PhaeoP97_03041	PWY-4521	arsenite oxidation I (respiratory)
PhaeoP97_03041	PWY-6692	Fe(II) oxidation
PhaeoP97_03041	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
PhaeoP97_03054	PWY-5686	UMP biosynthesis
PhaeoP97_03054	PWY-7790	PhaeoP97_03054
PhaeoP97_03054	PWY-7791	PhaeoP97_03054
PhaeoP97_03061	PWY-6840	homoglutathione biosynthesis
PhaeoP97_03061	PWY-7255	ergothioneine biosynthesis I (bacteria)
PhaeoP97_03068	PWY-6823	molybdenum cofactor biosynthesis
PhaeoP97_03068	PWY-7887	PhaeoP97_03068
PhaeoP97_03070	PWY-5269	cardiolipin biosynthesis II
PhaeoP97_03070	PWY-5668	cardiolipin biosynthesis I
PhaeoP97_03070	PWY-7817	PhaeoP97_03070
PhaeoP97_03082	PWY-1042	glycolysis IV (plant cytosol)
PhaeoP97_03082	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
PhaeoP97_03082	PWY-5484	glycolysis II (from fructose 6-phosphate)
PhaeoP97_03082	PWY-5723	Rubisco shunt
PhaeoP97_03082	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
PhaeoP97_03082	PWY-6886	1-butanol autotrophic biosynthesis
PhaeoP97_03082	PWY-6901	superpathway of glucose and xylose degradation
PhaeoP97_03082	PWY-7003	glycerol degradation to butanol
PhaeoP97_03082	PWY-7124	ethylene biosynthesis V (engineered)
PhaeoP97_03082	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
PhaeoP97_03119	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
PhaeoP97_03119	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
PhaeoP97_03119	PWY-7953	PhaeoP97_03119
PhaeoP97_03153	PWY-5686	UMP biosynthesis
PhaeoP97_03153	PWY-7790	PhaeoP97_03153
PhaeoP97_03153	PWY-7791	PhaeoP97_03153
PhaeoP97_03187	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
PhaeoP97_03192	PWY-7884	PhaeoP97_03192
PhaeoP97_03193	PWY-6123	inosine-5'-phosphate biosynthesis I
PhaeoP97_03193	PWY-6124	inosine-5'-phosphate biosynthesis II
PhaeoP97_03193	PWY-7234	inosine-5'-phosphate biosynthesis III
PhaeoP97_03198	PWY-2941	L-lysine biosynthesis II
PhaeoP97_03198	PWY-2942	L-lysine biosynthesis III
PhaeoP97_03198	PWY-5097	L-lysine biosynthesis VI
PhaeoP97_03216	PWY-7831	PhaeoP97_03216
PhaeoP97_03216	PWY-7833	PhaeoP97_03216
PhaeoP97_03224	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
PhaeoP97_03237	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
PhaeoP97_03244	PWY-6168	flavin biosynthesis III (fungi)
PhaeoP97_03244	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
PhaeoP97_03244	PWY-7991	PhaeoP97_03244
PhaeoP97_03246	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
PhaeoP97_03260	PWY-7675	Kdo transfer to lipid IV<sub>A</sub> II
PhaeoP97_03282	PWY-5704	urea degradation II
PhaeoP97_03284	PWY-5704	urea degradation II
PhaeoP97_03285	PWY-5704	urea degradation II
PhaeoP97_03294	PWY-2941	L-lysine biosynthesis II
PhaeoP97_03294	PWY-5097	L-lysine biosynthesis VI
PhaeoP97_03299	PWY-3781	aerobic respiration I (cytochrome c)
PhaeoP97_03299	PWY-6692	Fe(II) oxidation
PhaeoP97_03299	PWY-7082	ammonia oxidation IV (autotrophic ammonia oxidizers)
PhaeoP97_03299	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
PhaeoP97_03302	PWY-6167	flavin biosynthesis II (archaea)
PhaeoP97_03302	PWY-6168	flavin biosynthesis III (fungi)
PhaeoP97_03307	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
PhaeoP97_03312	PWY-5057	L-valine degradation II
PhaeoP97_03312	PWY-5076	L-leucine degradation III
PhaeoP97_03312	PWY-5078	L-isoleucine degradation II
PhaeoP97_03312	PWY-5101	L-isoleucine biosynthesis II
PhaeoP97_03312	PWY-5103	L-isoleucine biosynthesis III
PhaeoP97_03312	PWY-5104	L-isoleucine biosynthesis IV
PhaeoP97_03312	PWY-5108	L-isoleucine biosynthesis V
PhaeoP97_03312	PWY-7767	PhaeoP97_03312
PhaeoP97_03318	PWY-6891	thiazole biosynthesis II (Bacillus)
PhaeoP97_03318	PWY-6892	thiazole biosynthesis I (E. coli)
PhaeoP97_03318	PWY-7560	methylerythritol phosphate pathway II
PhaeoP97_03322	PWY-5392	reductive TCA cycle II
PhaeoP97_03322	PWY-5537	pyruvate fermentation to acetate V
PhaeoP97_03322	PWY-5538	pyruvate fermentation to acetate VI
PhaeoP97_03322	PWY-5690	TCA cycle II (plants and fungi)
PhaeoP97_03322	PWY-5913	TCA cycle VI (obligate autotrophs)
PhaeoP97_03322	PWY-6728	methylaspartate cycle
PhaeoP97_03322	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
PhaeoP97_03322	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
PhaeoP97_03325	PWY-6610	adenine and adenosine salvage IV
PhaeoP97_03326	PWY-6617	adenosine nucleotides degradation III
PhaeoP97_03332	PWY-6700	queuosine biosynthesis
PhaeoP97_03334	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
PhaeoP97_03334	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
PhaeoP97_03334	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
PhaeoP97_03334	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
PhaeoP97_03337	PWY-5785	di-<i>trans</i>,poly-<i>cis</i>-undecaprenyl phosphate biosynthesis
PhaeoP97_03363	PWY-7980	PhaeoP97_03363
PhaeoP97_03393	PWY-3722	glycine betaine biosynthesis II (Gram-positive bacteria)
PhaeoP97_03393	PWY-7494	choline degradation IV
PhaeoP97_03396	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
PhaeoP97_03396	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
PhaeoP97_03398	PWY-5667	CDP-diacylglycerol biosynthesis I
PhaeoP97_03398	PWY-5981	CDP-diacylglycerol biosynthesis III
PhaeoP97_03398	PWY-7902	PhaeoP97_03398
PhaeoP97_03404	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
PhaeoP97_03430	PWY-7851	PhaeoP97_03430
PhaeoP97_03431	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
PhaeoP97_03435	PWY-7980	PhaeoP97_03435
PhaeoP97_03448	PWY-1281	sulfoacetaldehyde degradation I
PhaeoP97_03448	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
PhaeoP97_03448	PWY-5482	pyruvate fermentation to acetate II
PhaeoP97_03448	PWY-5485	pyruvate fermentation to acetate IV
PhaeoP97_03448	PWY-5497	purine nucleobases degradation II (anaerobic)
PhaeoP97_03448	PWY-6637	sulfolactate degradation II
PhaeoP97_03448	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
PhaeoP97_03455	PWY-4983	L-citrulline-nitric oxide cycle
PhaeoP97_03455	PWY-4984	urea cycle
PhaeoP97_03455	PWY-5	canavanine biosynthesis
PhaeoP97_03455	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
PhaeoP97_03455	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
PhaeoP97_03480	PWY-5855	ubiquinol-7 biosynthesis (prokaryotic)
PhaeoP97_03480	PWY-5856	ubiquinol-9 biosynthesis (prokaryotic)
PhaeoP97_03480	PWY-5857	ubiquinol-10 biosynthesis (prokaryotic)
PhaeoP97_03480	PWY-5870	ubiquinol-8 biosynthesis (eukaryotic)
PhaeoP97_03480	PWY-5871	ubiquinol-9 biosynthesis (eukaryotic)
PhaeoP97_03480	PWY-5872	ubiquinol-10 biosynthesis (eukaryotic)
PhaeoP97_03480	PWY-5873	ubiquinol-7 biosynthesis (eukaryotic)
PhaeoP97_03480	PWY-6708	ubiquinol-8 biosynthesis (prokaryotic)
PhaeoP97_03480	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
PhaeoP97_03480	PWY-7233	ubiquinol-6 bypass biosynthesis (eukaryotic)
PhaeoP97_03488	PWY-6502	oxidized GTP and dGTP detoxification
PhaeoP97_03489	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
PhaeoP97_03500	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
PhaeoP97_03501	PWY-3801	sucrose degradation II (sucrose synthase)
PhaeoP97_03501	PWY-6527	stachyose degradation
PhaeoP97_03501	PWY-7238	sucrose biosynthesis II
PhaeoP97_03501	PWY-7343	UDP-glucose biosynthesis
PhaeoP97_03501	PWY-7817	PhaeoP97_03501
PhaeoP97_03502	PWY-3821	galactose degradation III
PhaeoP97_03502	PWY-6317	galactose degradation I (Leloir pathway)
PhaeoP97_03502	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
PhaeoP97_03502	PWY-6527	stachyose degradation
PhaeoP97_03502	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
PhaeoP97_03502	PWY-7344	UDP-D-galactose biosynthesis
PhaeoP97_03538	PWY-5028	L-histidine degradation II
PhaeoP97_03538	PWY-5030	L-histidine degradation III
PhaeoP97_03540	PWY-5028	L-histidine degradation II
PhaeoP97_03540	PWY-5030	L-histidine degradation III
PhaeoP97_03541	PWY-5028	L-histidine degradation II
PhaeoP97_03541	PWY-5030	L-histidine degradation III
PhaeoP97_03554	PWY-5839	menaquinol-7 biosynthesis
PhaeoP97_03554	PWY-5844	menaquinol-9 biosynthesis
PhaeoP97_03554	PWY-5849	menaquinol-6 biosynthesis
PhaeoP97_03554	PWY-5890	menaquinol-10 biosynthesis
PhaeoP97_03554	PWY-5891	menaquinol-11 biosynthesis
PhaeoP97_03554	PWY-5892	menaquinol-12 biosynthesis
PhaeoP97_03554	PWY-5895	menaquinol-13 biosynthesis
PhaeoP97_03580	PWY-3722	glycine betaine biosynthesis II (Gram-positive bacteria)
PhaeoP97_03580	PWY-7494	choline degradation IV
PhaeoP97_03641	PWY-7942	PhaeoP97_03641
PhaeoP97_03697	PWY-3661	glycine betaine degradation I
PhaeoP97_03697	PWY-4722	creatinine degradation II
PhaeoP97_03698	PWY-3661	glycine betaine degradation I
PhaeoP97_03698	PWY-4722	creatinine degradation II
PhaeoP97_03699	PWY-3661	glycine betaine degradation I
PhaeoP97_03699	PWY-4722	creatinine degradation II
PhaeoP97_03700	PWY-3661	glycine betaine degradation I
PhaeoP97_03700	PWY-4722	creatinine degradation II
PhaeoP97_03704	PWY-7533	gliotoxin biosynthesis
PhaeoP97_03815	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
PhaeoP97_03815	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
PhaeoP97_03818	PWY-5647	2-nitrobenzoate degradation I
PhaeoP97_03818	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
PhaeoP97_03818	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
PhaeoP97_03818	PWY-6505	L-tryptophan degradation XII (Geobacillus)
PhaeoP97_03822	PWY-43	putrescine biosynthesis II
PhaeoP97_03832	PWY-3781	aerobic respiration I (cytochrome c)
PhaeoP97_03832	PWY-4521	arsenite oxidation I (respiratory)
PhaeoP97_03832	PWY-6692	Fe(II) oxidation
PhaeoP97_03832	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
PhaeoP97_03839	PWY-6748	nitrate reduction VII (denitrification)
PhaeoP97_03839	PWY-7084	nitrifier denitrification
PhaeoP97_03849	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
PhaeoP97_03854	PWY-6891	thiazole biosynthesis II (Bacillus)
PhaeoP97_03854	PWY-6892	thiazole biosynthesis I (E. coli)
PhaeoP97_03854	PWY-7560	methylerythritol phosphate pathway II
PhaeoP97_03973	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
PhaeoP97_03991	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
PhaeoP97_03991	PWY-7820	PhaeoP97_03991
PhaeoP97_03997	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
PhaeoP97_03997	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
PhaeoP97_03997	PWY-7622	UDP-galactofuranose biosynthesis
PhaeoP97_04006	PWY-5738	GDP-6-deoxy-D-talose biosynthesis
PhaeoP97_04006	PWY-5739	GDP-D-perosamine biosynthesis
PhaeoP97_04006	PWY-5740	GDP-L-colitose biosynthesis
PhaeoP97_04006	PWY-66	GDP-L-fucose biosynthesis I (from GDP-D-mannose)
PhaeoP97_04006	PWY-7573	GDP-mycosamine biosynthesis
PhaeoP97_04007	PWY-66	GDP-L-fucose biosynthesis I (from GDP-D-mannose)
PhaeoP97_04008	PWY-5659	GDP-mannose biosynthesis
PhaeoP97_04008	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
PhaeoP97_04013	PWY-3221	dTDP-L-rhamnose biosynthesis II
PhaeoP97_04013	PWY-6808	dTDP-D-forosamine biosynthesis
PhaeoP97_04013	PWY-6942	dTDP-D-desosamine biosynthesis
PhaeoP97_04013	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
PhaeoP97_04013	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
PhaeoP97_04013	PWY-6974	dTDP-L-olivose biosynthesis
PhaeoP97_04013	PWY-6976	dTDP-L-mycarose biosynthesis
PhaeoP97_04013	PWY-7104	dTDP-L-megosamine biosynthesis
PhaeoP97_04013	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
PhaeoP97_04013	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
PhaeoP97_04013	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
PhaeoP97_04013	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
PhaeoP97_04013	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
PhaeoP97_04013	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
PhaeoP97_04013	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
PhaeoP97_04013	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
PhaeoP97_04013	PWY-7657	dTDP-&beta;-L-digitoxose biosynthesis
PhaeoP97_04013	PWY-7688	PhaeoP97_04013
PhaeoP97_04013	PWY-7814	PhaeoP97_04013
PhaeoP97_04015	PWY-3221	dTDP-L-rhamnose biosynthesis II
PhaeoP97_04015	PWY-6808	dTDP-D-forosamine biosynthesis
PhaeoP97_04015	PWY-6942	dTDP-D-desosamine biosynthesis
PhaeoP97_04015	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
PhaeoP97_04015	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
PhaeoP97_04015	PWY-6974	dTDP-L-olivose biosynthesis
PhaeoP97_04015	PWY-6976	dTDP-L-mycarose biosynthesis
PhaeoP97_04015	PWY-7104	dTDP-L-megosamine biosynthesis
PhaeoP97_04015	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
PhaeoP97_04015	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
PhaeoP97_04015	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
PhaeoP97_04015	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
PhaeoP97_04015	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
PhaeoP97_04015	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
PhaeoP97_04015	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
PhaeoP97_04015	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
PhaeoP97_04015	PWY-7657	dTDP-&beta;-L-digitoxose biosynthesis
PhaeoP97_04015	PWY-7688	PhaeoP97_04015
PhaeoP97_04015	PWY-7814	PhaeoP97_04015
PhaeoP97_04061	PWY-5162	2-oxopentenoate degradation
PhaeoP97_04062	PWY-5162	2-oxopentenoate degradation
PhaeoP97_04062	PWY-5436	L-threonine degradation IV
PhaeoP97_04062	PWY-5480	pyruvate fermentation to ethanol I
PhaeoP97_04062	PWY-6587	pyruvate fermentation to ethanol III
PhaeoP97_04062	PWY-7085	triethylamine degradation
PhaeoP97_04062	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
PhaeoP97_04069	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
PhaeoP97_04069	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
PhaeoP97_04070	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
PhaeoP97_04070	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
PhaeoP97_04077	PWY-5506	methanol oxidation to formaldehyde IV