locus-tag	class	description
AWJ11_00010	COG0230	Belongs to the bacterial ribosomal protein bL34 family
AWJ11_00015	COG0594	ribonuclease P activity
AWJ11_00020	COG0706	membrane insertase activity
AWJ11_00025	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
AWJ11_00040	COG1192	Involved in chromosome partitioning
AWJ11_00045	COG1475	DNA binding
AWJ11_00055	COG0356	it plays a direct role in the translocation of protons across the membrane
AWJ11_00065	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
AWJ11_00070	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
AWJ11_00080	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
AWJ11_00085	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
AWJ11_00095	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
AWJ11_00100	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
AWJ11_00105	COG3316	Transposase and inactivated derivatives
AWJ11_00125	COG2826	transposase and inactivated derivatives, IS30 family
AWJ11_00145	COG0489	protein tyrosine kinase activity
AWJ11_00175	COG2826	transposase and inactivated derivatives, IS30 family
AWJ11_00190	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
AWJ11_00190	COG0517	IMP dehydrogenase activity
AWJ11_00200	COG2867	negative regulation of translational initiation
AWJ11_00200	COG2226	methyltransferase
AWJ11_00215	COG2814	Major facilitator Superfamily
AWJ11_00235	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
AWJ11_00240	COG0109	protoheme IX farnesyltransferase activity
AWJ11_00245	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
AWJ11_00260	COG2267	carboxylic ester hydrolase activity
AWJ11_00355	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
AWJ11_00365	COG0189	ligase activity
AWJ11_00370	COG0635	Involved in the biosynthesis of porphyrin-containing compound
AWJ11_00375	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
AWJ11_00395	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
AWJ11_00415	COG1678	Uncharacterized ACR, COG1678
AWJ11_00420	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
AWJ11_00445	COG0814	amino acid
AWJ11_00450	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
AWJ11_00455	COG0281	malic enzyme
AWJ11_00465	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
AWJ11_00475	COG4221	oxidoreductase activity
AWJ11_00510	COG0489	protein tyrosine kinase activity
AWJ11_00510	COG3206	protein involved in exopolysaccharide biosynthesis
AWJ11_00515	COG1210	Utp--glucose-1-phosphate uridylyltransferase
AWJ11_00530	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
AWJ11_00540	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
AWJ11_00545	COG1215	transferase activity, transferring glycosyl groups
AWJ11_00555	COG0297	glycogen (starch) synthase activity
AWJ11_00560	COG0438	transferase activity, transferring glycosyl groups
AWJ11_00575	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
AWJ11_00585	COG2885	chlorophyll binding
AWJ11_00585	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
AWJ11_00590	COG1278	Cold shock
AWJ11_00595	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
AWJ11_00600	COG2826	transposase and inactivated derivatives, IS30 family
AWJ11_00605	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
AWJ11_00610	COG0745	RESPONSE REGULATOR receiver
AWJ11_00630	COG0181	hydroxymethylbilane synthase activity
AWJ11_00685	COG0583	DNA-binding transcription factor activity
AWJ11_00700	COG0210	DNA helicase
AWJ11_00710	COG0531	amino acid
AWJ11_00715	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
AWJ11_00720	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
AWJ11_00730	COG0318	PFAM AMP-dependent synthetase and ligase
AWJ11_00745	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
AWJ11_00750	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
AWJ11_00800	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
AWJ11_00805	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
AWJ11_00810	COG1952	One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA
AWJ11_00835	COG2027	D-alanyl-D-alanine carboxypeptidase
AWJ11_00840	COG2027	D-alanyl-D-alanine carboxypeptidase
AWJ11_00855	COG0210	DNA helicase
AWJ11_00870	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
AWJ11_00875	COG0788	formyltetrahydrofolate deformylase activity
AWJ11_00905	COG0259	pyridoxamine-phosphate oxidase activity
AWJ11_00935	COG1636	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
AWJ11_00955	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
AWJ11_00960	COG2119	membrane
AWJ11_01005	COG1534	Rna-binding protein
AWJ11_01015	COG0293	Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit
AWJ11_01020	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
AWJ11_01025	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
AWJ11_01035	COG0508	dehydrogenase complex catalyzes the overall conversion of
AWJ11_01040	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
AWJ11_01065	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
AWJ11_01070	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
AWJ11_01075	COG0511	ligase activity, forming carbon-carbon bonds
AWJ11_01080	COG0439	Biotin carboxylase
AWJ11_01095	COG2901	Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters
AWJ11_01100	COG0138	bifunctional purine biosynthesis protein purh
AWJ11_01105	COG0151	Belongs to the GarS family
AWJ11_01110	COG0006	proline dipeptidase activity
AWJ11_01125	COG0745	RESPONSE REGULATOR receiver
AWJ11_01130	COG0531	amino acid
AWJ11_01150	COG2925	Exonuclease
AWJ11_01160	COG2011	ABC-type metal ion transport system permease component
AWJ11_01180	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
AWJ11_01185	COG2070	2-Nitropropane dioxygenase
AWJ11_01190	COG0586	Pfam SNARE associated Golgi protein
AWJ11_01195	COG4536	flavin adenine dinucleotide binding
AWJ11_01200	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
AWJ11_01205	COG2995	paraquat-inducible protein a
AWJ11_01230	COG1301	dicarboxylic acid transport
AWJ11_01240	COG1521	Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
AWJ11_01265	COG3104	oligopeptide transport
AWJ11_01270	COG1062	S-(hydroxymethyl)glutathione dehydrogenase activity
AWJ11_01280	COG2801	Transposase and inactivated derivatives
AWJ11_01295	COG0552	protein localization to endoplasmic reticulum
AWJ11_01345	COG2826	transposase and inactivated derivatives, IS30 family
AWJ11_01405	COG1183	phosphatidylcholine synthase activity
AWJ11_01415	COG0456	acetyltransferase
AWJ11_01425	COG0084	hydrolase, TatD family'
AWJ11_01435	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
AWJ11_01490	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
AWJ11_01515	COG3385	transposase activity
AWJ11_01525	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
AWJ11_01535	COG1773	rubredoxin
AWJ11_01545	COG0316	Belongs to the HesB IscA family
AWJ11_01585	COG0084	hydrolase, TatD family'
AWJ11_01600	COG1028	Short-chain dehydrogenase reductase Sdr
AWJ11_01615	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
AWJ11_01620	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
AWJ11_01635	COG2826	transposase and inactivated derivatives, IS30 family
AWJ11_01650	COG1806	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the
AWJ11_01660	COG0833	amino acid
AWJ11_01685	COG2826	transposase and inactivated derivatives, IS30 family
AWJ11_01715	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
AWJ11_01720	COG2826	transposase and inactivated derivatives, IS30 family
AWJ11_01740	COG3385	transposase activity
AWJ11_01750	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
AWJ11_01795	COG3316	Transposase and inactivated derivatives
AWJ11_01830	COG2205	protein histidine kinase activity
AWJ11_01840	COG0500	methyltransferase
AWJ11_01865	COG2826	transposase and inactivated derivatives, IS30 family
AWJ11_01875	COG2826	transposase and inactivated derivatives, IS30 family
AWJ11_01880	COG0308	aminopeptidase N
AWJ11_01890	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
AWJ11_01895	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
AWJ11_01920	COG1113	amino acid transport
AWJ11_01945	COG0837	glucose binding
AWJ11_01950	COG2204	response regulator
AWJ11_01955	COG3852	Histidine kinase
AWJ11_01960	COG2204	response regulator
AWJ11_01965	COG1677	Flagellar hook-basal body complex protein FliE
AWJ11_01975	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
AWJ11_02020	COG2009	succinate dehydrogenase
AWJ11_02025	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
AWJ11_02030	COG1053	succinate dehydrogenase
AWJ11_02035	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
AWJ11_02050	COG0045	succinate-CoA ligase (ADP-forming) activity
AWJ11_02070	COG2826	transposase and inactivated derivatives, IS30 family
AWJ11_02095	COG1918	ferrous iron import across plasma membrane
AWJ11_02100	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
AWJ11_02110	COG0625	glutathione transferase activity
AWJ11_02115	COG2969	positive regulation of protein catabolic process
AWJ11_02120	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
AWJ11_02125	COG0792	nuclease activity
AWJ11_02135	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
AWJ11_02140	COG0142	geranyltranstransferase activity
AWJ11_02145	COG0261	This protein binds to 23S rRNA in the presence of protein L20
AWJ11_02155	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
AWJ11_02160	COG0840	transmembrane signaling receptor activity
AWJ11_02170	COG1509	lysine 2,3-aminomutase activity
AWJ11_02175	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
AWJ11_02180	COG2269	With EpmB is involved in the beta-lysylation step of the post-translational modification of translation elongation factor P (EF-P). Catalyzes the ATP-dependent activation of (R)-beta-lysine produced by EpmB, forming a lysyl-adenylate, from which the beta- lysyl moiety is then transferred to the epsilon-amino group of a conserved specific lysine residue in EF-P
AWJ11_02205	COG0438	transferase activity, transferring glycosyl groups
AWJ11_02215	COG0556	nucleotide-excision repair
AWJ11_02230	COG1086	Polysaccharide biosynthesis protein
AWJ11_02235	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
AWJ11_02240	COG1083	cytidylyl-transferase
AWJ11_02250	COG2089	acid synthase
AWJ11_02270	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
AWJ11_02275	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
AWJ11_02280	COG0291	Belongs to the bacterial ribosomal protein bL35 family
AWJ11_02295	COG0072	phenylalanine-tRNA ligase activity
AWJ11_02335	COG0069	glutamate synthase activity
AWJ11_02370	COG2826	transposase and inactivated derivatives, IS30 family
AWJ11_02385	COG2818	Glycosylase
AWJ11_02395	COG2963	transposase activity
AWJ11_02425	COG3316	Transposase and inactivated derivatives
AWJ11_02445	COG0728	peptidoglycan biosynthetic process
AWJ11_02450	COG0196	riboflavin kinase activity
AWJ11_02460	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
AWJ11_02465	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
AWJ11_02470	COG1047	Peptidyl-prolyl cis-trans
AWJ11_02475	COG2271	Major facilitator Superfamily
AWJ11_02485	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
AWJ11_02490	COG0840	transmembrane signaling receptor activity
AWJ11_02500	COG2826	transposase and inactivated derivatives, IS30 family
AWJ11_02515	COG3220	belongs to the UPF0276 family
AWJ11_02535	COG1051	belongs to the nudix hydrolase family
AWJ11_02575	COG2826	transposase and inactivated derivatives, IS30 family
AWJ11_02605	COG0735	belongs to the Fur family
AWJ11_02610	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
AWJ11_02625	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
AWJ11_02630	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
AWJ11_02635	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
AWJ11_02640	COG0126	phosphoglycerate kinase activity
AWJ11_02670	COG2826	transposase and inactivated derivatives, IS30 family
AWJ11_02700	COG3155	Displays glyoxalase activity, catalyzing the conversion of glyoxal to glycolate
AWJ11_02710	COG3385	transposase activity
AWJ11_02765	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
AWJ11_02770	COG2814	Major facilitator Superfamily
AWJ11_02775	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
AWJ11_02780	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
AWJ11_02795	COG2963	transposase activity
AWJ11_02800	COG2826	transposase and inactivated derivatives, IS30 family
AWJ11_02830	COG0307	riboflavin synthase, alpha
AWJ11_02835	COG0189	ligase activity
AWJ11_02855	COG2801	Transposase and inactivated derivatives
AWJ11_02860	COG2826	transposase and inactivated derivatives, IS30 family
AWJ11_02870	COG2177	Part of the ABC transporter FtsEX involved in
AWJ11_02875	COG2884	Cell division ATP-binding protein ftsE
AWJ11_02890	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
AWJ11_02895	COG3385	transposase activity
AWJ11_02910	COG0205	6-phosphofructokinase activity
AWJ11_02920	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
AWJ11_02940	COG2826	transposase and inactivated derivatives, IS30 family
AWJ11_02955	COG0546	phosphoglycolate phosphatase activity
AWJ11_02970	COG2350	Protein conserved in bacteria
AWJ11_02975	COG2917	probably involved in intracellular septation
AWJ11_02980	COG0009	L-threonylcarbamoyladenylate synthase
AWJ11_02985	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
AWJ11_02990	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
AWJ11_03020	COG0739	heme binding
AWJ11_03025	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
AWJ11_03035	COG0670	Belongs to the BI1 family
AWJ11_03040	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
AWJ11_03055	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
AWJ11_03080	COG2963	transposase activity
AWJ11_03090	COG2826	transposase and inactivated derivatives, IS30 family
AWJ11_03105	COG2801	Transposase and inactivated derivatives
AWJ11_03115	COG2963	transposase activity
AWJ11_03135	COG3240	lipase activity
AWJ11_03140	COG3385	transposase activity
AWJ11_03155	COG0742	ribosomal rna small subunit methyltransferase
AWJ11_03160	COG1760	l-serine dehydratase
AWJ11_03190	COG0220	tRNA (guanine-N7-)-methyltransferase activity
AWJ11_03195	COG3273	potassium ion transport
AWJ11_03195	COG0471	metal ion transport
AWJ11_03235	COG0166	Belongs to the GPI family
AWJ11_03245	COG1210	Utp--glucose-1-phosphate uridylyltransferase
AWJ11_03250	COG1262	PFAM Formylglycine-generating sulfatase enzyme
AWJ11_03280	COG3385	transposase activity
AWJ11_03290	COG2801	Transposase and inactivated derivatives
AWJ11_03305	COG3385	transposase activity
AWJ11_03310	COG2814	Major facilitator Superfamily
AWJ11_03315	COG0156	8-amino-7-oxononanoate synthase activity
AWJ11_03325	COG0179	Fumarylacetoacetate (FAA) hydrolase
AWJ11_03330	COG0835	chemotaxis
AWJ11_03330	COG0784	Response regulator, receiver
AWJ11_03360	COG2801	Transposase and inactivated derivatives
AWJ11_03375	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
AWJ11_03385	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
AWJ11_03405	COG2183	response to ionizing radiation
AWJ11_03425	COG2801	Transposase and inactivated derivatives
AWJ11_03430	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
AWJ11_03435	COG2871	sodium ion transport
AWJ11_03440	COG1438	arginine binding
AWJ11_03490	COG2801	Transposase and inactivated derivatives
AWJ11_03515	COG2826	transposase and inactivated derivatives, IS30 family
AWJ11_03520	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
AWJ11_03525	COG0154	amidase activity
AWJ11_03530	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
AWJ11_03535	COG1077	Cell shape determining protein MreB Mrl
AWJ11_03540	COG1792	Involved in formation and maintenance of cell shape
AWJ11_03550	COG0424	maF-like protein
AWJ11_03555	COG1530	ribonuclease E activity
AWJ11_03565	COG1212	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
AWJ11_03575	COG2826	transposase and inactivated derivatives, IS30 family
AWJ11_03580	COG3385	transposase activity
AWJ11_03585	COG2826	transposase and inactivated derivatives, IS30 family
AWJ11_03595	COG2171	N-acyltransferase activity
AWJ11_03600	COG0252	asparaginase activity
AWJ11_03605	COG2844	Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen
AWJ11_03610	COG0024	Methionine aminopeptidase
AWJ11_03615	COG0052	Belongs to the universal ribosomal protein uS2 family
AWJ11_03620	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
AWJ11_03625	COG0528	UMP kinase activity
AWJ11_03630	COG0233	cytoplasmic translational termination
AWJ11_03635	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
AWJ11_03640	COG0575	Belongs to the CDS family
AWJ11_03665	COG1443	Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP)
AWJ11_03700	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
AWJ11_03705	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
AWJ11_03710	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
AWJ11_03715	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
AWJ11_03720	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
AWJ11_03725	COG0587	DNA-directed DNA polymerase activity
AWJ11_03730	COG0825	malonyl-CoA metabolic process
AWJ11_03735	COG0037	tRNA processing
AWJ11_03740	COG0659	secondary active sulfate transmembrane transporter activity
AWJ11_03770	COG2826	transposase and inactivated derivatives, IS30 family
AWJ11_03800	COG2223	nitrite transmembrane transporter activity
AWJ11_03835	COG2801	Transposase and inactivated derivatives
AWJ11_03935	COG0351	phosphomethylpyrimidine kinase
AWJ11_03960	COG0421	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
AWJ11_03970	COG1566	PFAM secretion protein HlyD family protein
AWJ11_03975	COG2814	Major facilitator Superfamily
AWJ11_03980	COG1538	Outer membrane efflux protein
AWJ11_03985	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
AWJ11_03995	COG2197	response regulator
AWJ11_04000	COG0322	excinuclease ABC activity
AWJ11_04030	COG2826	transposase and inactivated derivatives, IS30 family
AWJ11_04040	COG2963	transposase activity
AWJ11_04095	COG2801	Transposase and inactivated derivatives
AWJ11_04110	COG3385	transposase activity
AWJ11_04130	COG0656	L-ascorbic acid biosynthetic process
AWJ11_04140	COG0477	Major facilitator Superfamily
AWJ11_04145	COG0235	Class ii aldolase
AWJ11_04155	COG0626	cystathionine gamma-synthase activity
AWJ11_04165	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
AWJ11_04180	COG0544	peptidyl-prolyl cis-trans isomerase activity
AWJ11_04185	COG0740	serine-type endopeptidase activity
AWJ11_04190	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
AWJ11_04195	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
AWJ11_04200	COG0776	regulation of translation
AWJ11_04210	COG1560	Kdo2-lipid A biosynthetic process
AWJ11_04215	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
AWJ11_04225	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
AWJ11_04230	COG2274	protein secretion by the type I secretion system
AWJ11_04235	COG2274	protein secretion by the type I secretion system
AWJ11_04240	COG0153	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
AWJ11_04250	COG1686	Belongs to the peptidase S11 family
AWJ11_04320	COG2826	transposase and inactivated derivatives, IS30 family
AWJ11_04325	COG0187	DNA topoisomerase II activity
AWJ11_04395	COG0776	regulation of translation
AWJ11_04400	COG0494	nUDIX hydrolase
AWJ11_04405	COG3385	transposase activity
AWJ11_04415	COG0039	L-malate dehydrogenase activity
AWJ11_04420	COG1538	Outer membrane efflux protein
AWJ11_04425	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
AWJ11_04430	COG3150	esterase
AWJ11_04435	COG4988	ABC transporter
AWJ11_04440	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
AWJ11_04465	COG3104	oligopeptide transport
AWJ11_04470	COG3385	transposase activity
AWJ11_04475	COG2826	transposase and inactivated derivatives, IS30 family
AWJ11_04500	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
AWJ11_04515	COG1546	Belongs to the CinA family
AWJ11_04515	COG1058	Belongs to the CinA family
AWJ11_04540	COG3385	transposase activity
AWJ11_04555	COG4948	Mandelate Racemase Muconate Lactonizing
AWJ11_04565	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
AWJ11_04570	COG0450	alkyl hydroperoxide reductase
AWJ11_04580	COG0500	methyltransferase
AWJ11_04585	COG3385	transposase activity
AWJ11_04600	COG2826	transposase and inactivated derivatives, IS30 family
AWJ11_04615	COG3385	transposase activity
AWJ11_04630	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
AWJ11_04645	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
AWJ11_04650	COG0531	amino acid
AWJ11_04655	COG2826	transposase and inactivated derivatives, IS30 family
AWJ11_04665	COG2801	Transposase and inactivated derivatives
AWJ11_04755	COG2801	Transposase and inactivated derivatives
AWJ11_04780	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
AWJ11_04785	COG0358	DNA primase activity
AWJ11_04790	COG1610	YqeY-like protein
AWJ11_04795	COG0828	Belongs to the bacterial ribosomal protein bS21 family
AWJ11_04800	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
AWJ11_04805	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
AWJ11_04820	COG3385	transposase activity
AWJ11_04830	COG3385	transposase activity
AWJ11_04840	COG2826	transposase and inactivated derivatives, IS30 family
AWJ11_04870	COG1621	beta-fructofuranosidase activity
AWJ11_04890	COG0259	pyridoxamine-phosphate oxidase activity
AWJ11_04895	COG0589	response to stress
AWJ11_04905	COG1228	amidohydrolase
AWJ11_04910	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
AWJ11_04915	COG2986	histidine ammonia-lyase
AWJ11_04940	COG3385	transposase activity
AWJ11_04960	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
AWJ11_04965	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
AWJ11_04975	COG3956	TIGRFAM MazG family protein
AWJ11_04980	COG3956	TIGRFAM MazG family protein
AWJ11_04990	COG0563	adenylate kinase activity
AWJ11_04995	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
AWJ11_05000	COG2223	nitrite transmembrane transporter activity
AWJ11_05015	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
AWJ11_05020	COG0542	response to heat
AWJ11_05025	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
AWJ11_05035	COG2826	transposase and inactivated derivatives, IS30 family
AWJ11_05040	COG2826	transposase and inactivated derivatives, IS30 family
AWJ11_05050	COG0492	ferredoxin-NADP+ reductase activity
AWJ11_05055	COG1674	ftsk spoiiie
AWJ11_05070	COG0565	Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA
AWJ11_05075	COG1104	cysteine desulfurase activity
AWJ11_05085	COG0105	UTP biosynthetic process
AWJ11_05090	COG0820	rRNA (adenine-C2-)-methyltransferase activity
AWJ11_05110	COG0124	histidyl-tRNA synthetase
AWJ11_05120	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
AWJ11_05125	COG1160	GTP binding
AWJ11_05145	COG1192	Involved in chromosome partitioning
AWJ11_05155	COG0835	chemotaxis
AWJ11_05190	COG2201	protein-glutamate methylesterase activity
AWJ11_05200	COG1530	ribonuclease E activity
AWJ11_05210	COG2918	glutathione biosynthetic process
AWJ11_05215	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
AWJ11_05220	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
AWJ11_05225	COG0632	four-way junction helicase activity
AWJ11_05230	COG2255	four-way junction helicase activity
AWJ11_05235	COG0811	peptide transport
AWJ11_05250	COG0823	Involved in the tonB-independent uptake of proteins
AWJ11_05260	COG1729	Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division
AWJ11_05265	COG0602	queuosine metabolic process
AWJ11_05285	COG1570	exodeoxyribonuclease VII activity
AWJ11_05290	COG1131	(ABC) transporter
AWJ11_05295	COG0842	Transport permease protein
AWJ11_05305	COG2826	transposase and inactivated derivatives, IS30 family
AWJ11_05315	COG0442	prolyl-tRNA aminoacylation
AWJ11_05320	COG3385	transposase activity
AWJ11_05345	COG3385	transposase activity
AWJ11_05380	COG3385	transposase activity
AWJ11_05385	COG2204	response regulator
AWJ11_05405	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
AWJ11_05410	COG0616	signal peptide processing
AWJ11_05415	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
AWJ11_05485	COG1012	belongs to the aldehyde dehydrogenase family
AWJ11_05510	COG2801	Transposase and inactivated derivatives
AWJ11_05525	COG0183	Belongs to the thiolase family
AWJ11_05545	COG1472	Belongs to the glycosyl hydrolase 3 family
AWJ11_05550	COG0668	transmembrane transport
AWJ11_05555	COG0598	Magnesium transport protein CorA
AWJ11_05560	COG0318	PFAM AMP-dependent synthetase and ligase
AWJ11_05570	COG0460	homoserine dehydrogenase
AWJ11_05570	COG0527	aspartate kinase activity
AWJ11_05580	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
AWJ11_05595	COG2801	Transposase and inactivated derivatives
AWJ11_05600	COG2801	Transposase and inactivated derivatives
AWJ11_05605	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
AWJ11_05610	COG2814	Major facilitator Superfamily
AWJ11_05615	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
AWJ11_05710	COG1181	Belongs to the D-alanine--D-alanine ligase family
AWJ11_05735	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
AWJ11_05745	COG0564	pseudouridine synthase activity
AWJ11_05750	COG1335	isochorismatase
AWJ11_05755	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
AWJ11_05785	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
AWJ11_05805	COG2826	transposase and inactivated derivatives, IS30 family
AWJ11_05825	COG2826	transposase and inactivated derivatives, IS30 family
AWJ11_05835	COG0288	reversible hydration of carbon dioxide
AWJ11_05840	COG2814	Major facilitator Superfamily
AWJ11_05845	COG0525	valine-tRNA ligase activity
AWJ11_05855	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
AWJ11_05860	COG0795	lipopolysaccharide-transporting ATPase activity
AWJ11_05870	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
AWJ11_05880	COG1862	Preprotein translocase
AWJ11_05885	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
AWJ11_05890	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
AWJ11_05905	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
AWJ11_05910	COG1876	peptidase activity
AWJ11_05925	COG1090	epimerase
AWJ11_05990	COG3316	Transposase and inactivated derivatives
AWJ11_05995	COG3316	Transposase and inactivated derivatives
AWJ11_06005	COG0851	Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell
AWJ11_06010	COG2894	cell division
AWJ11_06030	COG0733	neurotransmitter:sodium symporter activity
AWJ11_06050	COG2894	cell division
AWJ11_06070	COG0733	neurotransmitter:sodium symporter activity
AWJ11_06075	COG0708	Exodeoxyribonuclease III
AWJ11_06110	COG3385	transposase activity
AWJ11_06145	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
AWJ11_06150	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
AWJ11_06155	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
AWJ11_06170	COG0326	Molecular chaperone. Has ATPase activity
AWJ11_06230	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
AWJ11_06230	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
AWJ11_06255	COG3385	transposase activity
AWJ11_06310	COG2801	Transposase and inactivated derivatives
AWJ11_06320	COG3385	transposase activity
AWJ11_06325	COG2826	transposase and inactivated derivatives, IS30 family
AWJ11_06360	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
AWJ11_06360	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
AWJ11_06385	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
AWJ11_06390	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
AWJ11_06400	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
AWJ11_06440	COG2805	Type II/IV secretion system protein
AWJ11_06535	COG1015	Phosphotransfer between the C1 and C5 carbon atoms of pentose
AWJ11_06540	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
AWJ11_06545	COG1294	oxidase, subunit
AWJ11_06590	COG2240	Pyridoxal kinase involved in the salvage pathway of pyridoxal 5'-phosphate (PLP). Catalyzes the phosphorylation of pyridoxal to PLP
AWJ11_06605	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
AWJ11_06635	COG0730	response to heat
AWJ11_06640	COG1671	Belongs to the UPF0178 family
AWJ11_06645	COG0688	phosphatidylethanolamine metabolic process
AWJ11_06650	COG1162	GTPase activity
AWJ11_06660	COG0802	atpase or kinase
AWJ11_06670	COG0783	Belongs to the Dps family
AWJ11_06695	COG2801	Transposase and inactivated derivatives
AWJ11_06705	COG3385	transposase activity
AWJ11_06715	COG2826	transposase and inactivated derivatives, IS30 family
AWJ11_06740	COG2826	transposase and inactivated derivatives, IS30 family
AWJ11_06750	COG0488	(ABC) transporter
AWJ11_06760	COG0027	Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
AWJ11_06770	COG0101	tRNA pseudouridine synthase activity
AWJ11_06775	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
AWJ11_06780	COG0285	dihydrofolate synthase activity
AWJ11_06785	COG1286	toxin biosynthetic process
AWJ11_06800	COG0405	Gamma-glutamyltransferase
AWJ11_06815	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
AWJ11_06825	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
AWJ11_06840	COG1551	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
AWJ11_06875	COG0531	amino acid
AWJ11_06880	COG0584	glycerophosphoryl diester phosphodiesterase
AWJ11_06885	COG2271	Major facilitator Superfamily
AWJ11_06890	COG1923	regulation of RNA biosynthetic process
AWJ11_06895	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
AWJ11_06900	COG0330	HflC and HflK could
AWJ11_06905	COG0330	HflC and HflK could
AWJ11_06910	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
AWJ11_06915	COG2252	PERMEase
AWJ11_06920	COG0557	exoribonuclease II activity
AWJ11_06925	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
AWJ11_06955	COG2801	Transposase and inactivated derivatives
AWJ11_06975	COG3316	Transposase and inactivated derivatives
AWJ11_06980	COG1120	ATPase activity
AWJ11_06985	COG0019	diaminopimelate decarboxylase activity
AWJ11_06995	COG2814	Major facilitator Superfamily
AWJ11_07005	COG1181	Belongs to the D-alanine--D-alanine ligase family
AWJ11_07010	COG4772	TonB-dependent receptor
AWJ11_07015	COG0811	peptide transport
AWJ11_07035	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
AWJ11_07050	COG3385	transposase activity
AWJ11_07065	COG1902	pentaerythritol trinitrate reductase activity
AWJ11_07065	COG0446	pyridine nucleotide-disulphide oxidoreductase
AWJ11_07075	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
AWJ11_07085	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
AWJ11_07090	COG0336	Belongs to the RNA methyltransferase TrmD family
AWJ11_07095	COG0335	large ribosomal subunit rRNA binding
AWJ11_07120	COG2801	Transposase and inactivated derivatives
AWJ11_07140	COG2801	Transposase and inactivated derivatives
AWJ11_07145	COG2826	transposase and inactivated derivatives, IS30 family
AWJ11_07170	COG3385	transposase activity
AWJ11_07180	COG2801	Transposase and inactivated derivatives
AWJ11_07220	COG3385	transposase activity
AWJ11_07230	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
AWJ11_07235	COG0853	Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine
AWJ11_07240	COG0504	CTP synthase activity
AWJ11_07245	COG2877	3-deoxy-8-phosphooctulonate synthase activity
AWJ11_07250	COG0148	phosphopyruvate hydratase activity
AWJ11_07260	COG0585	pseudouridine synthase activity
AWJ11_07265	COG0531	amino acid
AWJ11_07270	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
AWJ11_07275	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
AWJ11_07290	COG3385	transposase activity
AWJ11_07330	COG2826	transposase and inactivated derivatives, IS30 family
AWJ11_07345	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
AWJ11_07350	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
AWJ11_07355	COG1845	cytochrome c oxidase, subunit III
AWJ11_07360	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
AWJ11_07410	COG3104	oligopeptide transport
AWJ11_07425	COG2814	Major facilitator Superfamily
AWJ11_07430	COG0814	amino acid
AWJ11_07440	COG2840	Smr protein MutS2
AWJ11_07445	COG2890	protein-(glutamine-N5) methyltransferase activity
AWJ11_07450	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
AWJ11_07455	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
AWJ11_07460	COG0346	lactoylglutathione lyase activity
AWJ11_07485	COG0095	Lipoate-protein ligase
AWJ11_07490	COG0095	Lipoate-protein ligase
AWJ11_07495	COG0739	heme binding
AWJ11_07515	COG0488	(ABC) transporter
AWJ11_07525	COG1388	LysM domain
AWJ11_07525	COG0741	lytic transglycosylase activity
AWJ11_07560	COG1987	bacterial-type flagellum assembly
AWJ11_07575	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
AWJ11_07585	COG0455	bacterial-type flagellum organization
AWJ11_07600	COG3143	Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P)
AWJ11_07625	COG1959	2 iron, 2 sulfur cluster binding
AWJ11_07630	COG0719	Fe-S assembly protein
AWJ11_07635	COG0396	ATPase activity
AWJ11_07640	COG0719	Fe-S assembly protein
AWJ11_07645	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
AWJ11_07650	COG0316	Belongs to the HesB IscA family
AWJ11_07665	COG2826	transposase and inactivated derivatives, IS30 family
AWJ11_07675	COG2963	transposase activity
AWJ11_07695	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
AWJ11_07740	COG0387	Pfam Sodium calcium exchanger
AWJ11_07745	COG2826	transposase and inactivated derivatives, IS30 family
AWJ11_07750	COG0686	Belongs to the AlaDH PNT family
AWJ11_07790	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
AWJ11_07795	COG3508	Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate
AWJ11_07820	COG2826	transposase and inactivated derivatives, IS30 family
AWJ11_07835	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
AWJ11_07840	COG0477	Major facilitator Superfamily
AWJ11_07845	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
AWJ11_07890	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
AWJ11_07915	COG2801	Transposase and inactivated derivatives
AWJ11_07945	COG2801	Transposase and inactivated derivatives
AWJ11_07955	COG4974	Belongs to the 'phage' integrase family
AWJ11_07970	COG2826	transposase and inactivated derivatives, IS30 family
AWJ11_07985	COG0475	glutathione-regulated potassium exporter activity
AWJ11_07985	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
AWJ11_08005	COG2801	Transposase and inactivated derivatives
AWJ11_08010	COG2826	transposase and inactivated derivatives, IS30 family
AWJ11_08015	COG1115	amino acid carrier protein
AWJ11_08020	COG0740	serine-type endopeptidase activity
AWJ11_08030	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
AWJ11_08040	COG1663	tetraacyldisaccharide 4'-kinase activity
AWJ11_08045	COG1132	(ABC) transporter
AWJ11_08050	COG0848	biopolymer transport protein
AWJ11_08055	COG0811	peptide transport
AWJ11_08065	COG2826	transposase and inactivated derivatives, IS30 family
AWJ11_08080	COG2801	Transposase and inactivated derivatives
AWJ11_08110	COG2801	Transposase and inactivated derivatives
AWJ11_08135	COG2826	transposase and inactivated derivatives, IS30 family
AWJ11_08140	COG2333	competence protein COMEC
AWJ11_08140	COG0658	competence protein
AWJ11_08150	COG0583	DNA-binding transcription factor activity
AWJ11_08155	COG4991	sh3 domain protein
AWJ11_08155	COG3064	Membrane
AWJ11_08155	COG0515	serine threonine protein kinase
AWJ11_08175	COG0513	Belongs to the DEAD box helicase family
AWJ11_08180	COG2866	Carboxypeptidase
AWJ11_08185	COG2095	MarC family integral membrane protein
AWJ11_08205	COG1280	lysine exporter protein (LysE YggA)
AWJ11_08225	COG0515	serine threonine protein kinase
AWJ11_08225	COG2815	serine threonine protein kinase
AWJ11_08245	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
AWJ11_08250	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
AWJ11_08255	COG2814	Major facilitator Superfamily
AWJ11_08285	COG2801	Transposase and inactivated derivatives
AWJ11_08300	COG3676	manually curated
AWJ11_08315	COG2826	transposase and inactivated derivatives, IS30 family
AWJ11_08345	COG0515	serine threonine protein kinase
AWJ11_08345	COG3064	Membrane
AWJ11_08345	COG4991	sh3 domain protein
AWJ11_08355	COG0659	secondary active sulfate transmembrane transporter activity
AWJ11_08370	COG0741	lytic transglycosylase activity
AWJ11_08375	COG2826	transposase and inactivated derivatives, IS30 family
AWJ11_08390	COG0513	Belongs to the DEAD box helicase family
AWJ11_08450	COG0590	tRNA wobble adenosine to inosine editing
AWJ11_08490	COG2801	Transposase and inactivated derivatives
AWJ11_08525	COG2826	transposase and inactivated derivatives, IS30 family
AWJ11_08535	COG1294	oxidase, subunit
AWJ11_08570	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
AWJ11_08610	COG3385	transposase activity
AWJ11_08630	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
AWJ11_08645	COG2801	Transposase and inactivated derivatives
AWJ11_08675	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
AWJ11_08680	COG2908	Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
AWJ11_08685	COG0784	Response regulator, receiver
AWJ11_08685	COG0835	chemotaxis
AWJ11_08690	COG0596	Alpha beta hydrolase
AWJ11_08700	COG1643	Atp-dependent helicase
AWJ11_08715	COG2070	2-Nitropropane dioxygenase
AWJ11_08730	COG0604	alcohol dehydrogenase
AWJ11_08730	COG1028	Short-chain dehydrogenase reductase Sdr
AWJ11_08730	COG3321	synthase
AWJ11_08750	COG2963	transposase activity
AWJ11_08755	COG0835	chemotaxis
AWJ11_08755	COG0784	Response regulator, receiver
AWJ11_08770	COG3270	Specifically methylates the cytosine at position 1407 (m5C1407) of 16S rRNA
AWJ11_08770	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
AWJ11_08805	COG3270	Specifically methylates the cytosine at position 1407 (m5C1407) of 16S rRNA
AWJ11_08805	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
AWJ11_08830	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
AWJ11_08835	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
AWJ11_08840	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
AWJ11_08850	COG0729	surface antigen
AWJ11_08865	COG1376	ErfK ybiS ycfS ynhG family protein
AWJ11_08980	COG2801	Transposase and inactivated derivatives
AWJ11_08995	COG2826	transposase and inactivated derivatives, IS30 family
AWJ11_09000	COG3385	transposase activity
AWJ11_09025	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
AWJ11_09030	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
AWJ11_09035	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
AWJ11_09070	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
AWJ11_09085	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
AWJ11_09090	COG2081	HI0933 family
AWJ11_09095	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
AWJ11_09105	COG1024	Enoyl-CoA hydratase
AWJ11_09115	COG3501	Rhs element vgr protein
AWJ11_09130	COG1960	acyl-CoA dehydrogenase activity
AWJ11_09135	COG0183	Belongs to the thiolase family
AWJ11_09140	COG1024	Enoyl-CoA hydratase
AWJ11_09140	COG1250	3-hydroxyacyl-CoA dehydrogenase
AWJ11_09165	COG2963	transposase activity
AWJ11_09195	COG4591	ABC-type transport system involved in lipoprotein release permease component
AWJ11_09200	COG2957	Belongs to the agmatine deiminase family
AWJ11_09205	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
AWJ11_09215	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
AWJ11_09230	COG2826	transposase and inactivated derivatives, IS30 family
AWJ11_09245	COG0717	Belongs to the dCTP deaminase family
AWJ11_09275	COG3385	transposase activity
AWJ11_09310	COG2826	transposase and inactivated derivatives, IS30 family
AWJ11_09345	COG0564	pseudouridine synthase activity
AWJ11_09400	COG4221	oxidoreductase activity
AWJ11_09405	COG2826	transposase and inactivated derivatives, IS30 family
AWJ11_09410	COG4221	oxidoreductase activity
AWJ11_09445	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
AWJ11_09460	COG2801	Transposase and inactivated derivatives
AWJ11_09580	COG4786	Flagellar basal body rod
AWJ11_09580	COG1256	bacterial-type flagellum assembly
AWJ11_09590	COG1706	bacterial-type flagellum-dependent cell motility
AWJ11_09600	COG4786	Flagellar basal body rod
AWJ11_09605	COG4787	bacterial-type flagellum-dependent cell motility
AWJ11_09610	COG1749	Flagellar hook protein flgE
AWJ11_09615	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
AWJ11_09620	COG1558	bacterial-type flagellum-dependent cell motility
AWJ11_09645	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
AWJ11_09670	COG2022	thiamine diphosphate biosynthetic process
AWJ11_09685	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
AWJ11_09690	COG0531	amino acid
AWJ11_09705	COG0745	RESPONSE REGULATOR receiver
AWJ11_09710	COG0642	Histidine kinase
AWJ11_09715	COG2801	Transposase and inactivated derivatives
AWJ11_09745	COG2826	transposase and inactivated derivatives, IS30 family
AWJ11_09765	COG1393	Belongs to the ArsC family
AWJ11_09770	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
AWJ11_09775	COG2066	Belongs to the glutaminase family
AWJ11_09780	COG0736	holo-[acyl-carrier-protein] synthase activity
AWJ11_09785	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
AWJ11_09790	COG1381	Involved in DNA repair and RecF pathway recombination
AWJ11_09810	COG0681	Belongs to the peptidase S26 family
AWJ11_09820	COG1595	DNA-templated transcription, initiation
AWJ11_09835	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
AWJ11_09840	COG0354	folic acid binding
AWJ11_09865	COG2826	transposase and inactivated derivatives, IS30 family
AWJ11_09870	COG2801	Transposase and inactivated derivatives
AWJ11_09920	COG0583	DNA-binding transcription factor activity
AWJ11_09925	COG1199	ATP-dependent helicase activity
AWJ11_09970	COG0305	Participates in initiation and elongation during chromosome replication
AWJ11_09975	COG0359	binds to the 23S rRNA
AWJ11_09985	COG0360	Binds together with S18 to 16S ribosomal RNA
AWJ11_10000	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
AWJ11_10005	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
AWJ11_10010	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
AWJ11_10055	COG2826	transposase and inactivated derivatives, IS30 family
AWJ11_10060	COG2801	Transposase and inactivated derivatives
AWJ11_10095	COG3385	transposase activity
AWJ11_10110	COG1074	ATP-dependent DNA helicase activity
AWJ11_10120	COG2814	Major facilitator Superfamily
AWJ11_10165	COG2801	Transposase and inactivated derivatives
AWJ11_10195	COG1360	Flagellar Motor Protein
AWJ11_10200	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
AWJ11_10205	COG0142	geranyltranstransferase activity
AWJ11_10210	COG1469	GTP cyclohydrolase I activity
AWJ11_10260	COG3385	transposase activity
AWJ11_10280	COG2963	transposase activity
AWJ11_10310	COG2801	Transposase and inactivated derivatives
AWJ11_10355	COG1366	Belongs to the anti-sigma-factor antagonist family
AWJ11_10360	COG3316	Transposase and inactivated derivatives
AWJ11_10370	COG2304	oxidoreductase activity
AWJ11_10375	COG2826	transposase and inactivated derivatives, IS30 family
AWJ11_10395	COG0714	Associated with various cellular activities
AWJ11_10400	COG0604	alcohol dehydrogenase
AWJ11_10415	COG3316	Transposase and inactivated derivatives
AWJ11_10455	COG2826	transposase and inactivated derivatives, IS30 family
AWJ11_10470	COG3316	Transposase and inactivated derivatives
AWJ11_10480	COG3385	transposase activity
AWJ11_10485	COG2801	Transposase and inactivated derivatives
AWJ11_10560	COG0189	ligase activity
AWJ11_10565	COG1131	(ABC) transporter
AWJ11_10625	COG0784	Response regulator, receiver
AWJ11_10625	COG0835	chemotaxis
AWJ11_10640	COG2826	transposase and inactivated derivatives, IS30 family
AWJ11_10665	COG2860	membrane
AWJ11_10675	COG2166	iron-sulfur cluster assembly
AWJ11_10690	COG2801	Transposase and inactivated derivatives
AWJ11_10720	COG2205	protein histidine kinase activity
AWJ11_10725	COG0745	RESPONSE REGULATOR receiver
AWJ11_10745	COG0424	maF-like protein
AWJ11_10760	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
AWJ11_10765	COG2902	Dehydrogenase
AWJ11_10775	COG2766	serine protein kinase
AWJ11_10785	COG2719	SpoVR family
AWJ11_10795	COG1994	Peptidase M50
AWJ11_10810	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
AWJ11_10825	COG2904	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
AWJ11_10825	COG0780	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
AWJ11_10835	COG1940	carbohydrate kinase activity
AWJ11_10840	COG1011	Hydrolase
AWJ11_10850	COG4178	(ABC) transporter
AWJ11_10860	COG1194	a g-specific adenine glycosylase
AWJ11_10865	COG2924	Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes
AWJ11_10870	COG3385	transposase activity
AWJ11_10885	COG2801	Transposase and inactivated derivatives
AWJ11_10935	COG3724	N-succinylarginine dihydrolase activity
AWJ11_10950	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
AWJ11_10955	COG1607	acyl-coa hydrolase
AWJ11_10960	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
AWJ11_10965	COG1561	YicC-like family, N-terminal region
AWJ11_10970	COG0194	GDP metabolic process
AWJ11_10975	COG1758	RNA polymerase activity
AWJ11_10980	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
AWJ11_11000	COG3706	GGDEF domain
AWJ11_11005	COG0477	Major facilitator Superfamily
AWJ11_11010	COG2826	transposase and inactivated derivatives, IS30 family
AWJ11_11025	COG3385	transposase activity
AWJ11_11040	COG0477	Major facilitator Superfamily
AWJ11_11070	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
AWJ11_11080	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
AWJ11_11095	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
AWJ11_11095	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
AWJ11_11100	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
AWJ11_11105	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
AWJ11_11110	COG0488	(ABC) transporter
AWJ11_11145	COG2826	transposase and inactivated derivatives, IS30 family
AWJ11_11155	COG0346	lactoylglutathione lyase activity
AWJ11_11160	COG1555	photosystem II stabilization
AWJ11_11170	COG0539	negative regulation of cytoplasmic translation
AWJ11_11180	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
AWJ11_11185	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
AWJ11_11195	COG3676	manually curated
AWJ11_11200	COG0402	S-adenosylhomocysteine deaminase activity
AWJ11_11225	COG0798	PFAM Bile acid sodium symporter
AWJ11_11255	COG0505	Belongs to the CarA family
AWJ11_11260	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
AWJ11_11265	COG0540	Belongs to the ATCase OTCase family
AWJ11_11270	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
AWJ11_11280	COG0542	response to heat
AWJ11_11285	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
AWJ11_11315	COG2814	Major facilitator Superfamily
AWJ11_11325	COG2878	Part of a membrane complex involved in electron transport
AWJ11_11330	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
AWJ11_11370	COG0670	Belongs to the BI1 family
AWJ11_11375	COG1553	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
AWJ11_11390	COG2920	part of a sulfur-relay system
AWJ11_11395	COG2095	MarC family integral membrane protein
AWJ11_11430	COG0742	ribosomal rna small subunit methyltransferase
AWJ11_11480	COG2971	BadF BadG BcrA BcrD
AWJ11_11485	COG2814	Major facilitator Superfamily
AWJ11_11490	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
AWJ11_11495	COG1959	2 iron, 2 sulfur cluster binding
AWJ11_11500	COG1017	nitric oxide dioxygenase activity
AWJ11_11500	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
AWJ11_11505	COG2197	response regulator
AWJ11_11515	COG2962	Rard protein
AWJ11_11535	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
AWJ11_11540	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
AWJ11_11550	COG0628	permease
AWJ11_11555	COG2076	Multidrug Resistance protein
AWJ11_11560	COG2076	Multidrug Resistance protein
AWJ11_11575	COG1619	proteins homologs of microcin C7 resistance protein MccF
AWJ11_11585	COG3385	transposase activity
AWJ11_11595	COG2963	transposase activity
AWJ11_11635	COG3385	transposase activity
AWJ11_11655	COG2814	Major facilitator Superfamily
AWJ11_11660	COG2890	protein-(glutamine-N5) methyltransferase activity
AWJ11_11665	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
AWJ11_11690	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
AWJ11_11695	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
AWJ11_11700	COG0193	aminoacyl-tRNA hydrolase activity
AWJ11_11710	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
AWJ11_11715	COG2226	methyltransferase
AWJ11_11740	COG2826	transposase and inactivated derivatives, IS30 family
AWJ11_11755	COG3385	transposase activity
AWJ11_11775	COG3104	oligopeptide transport
AWJ11_11785	COG2801	Transposase and inactivated derivatives
AWJ11_11790	COG3104	oligopeptide transport
AWJ11_11800	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
AWJ11_11805	COG0509	glycine decarboxylation via glycine cleavage system
AWJ11_11810	COG0404	The glycine cleavage system catalyzes the degradation of glycine
AWJ11_11815	COG1519	Transferase
AWJ11_11820	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
AWJ11_11825	COG1215	transferase activity, transferring glycosyl groups
AWJ11_11835	COG0859	PFAM glycosyl transferase family 9
AWJ11_11850	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
AWJ11_11855	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
AWJ11_11860	COG3161	chorismate lyase activity
AWJ11_11880	COG0247	lactate metabolic process
AWJ11_11880	COG0277	FAD linked oxidase domain protein
AWJ11_11885	COG2827	Endonuclease containing a URI domain
AWJ11_11910	COG2826	transposase and inactivated derivatives, IS30 family
AWJ11_11945	COG3385	transposase activity
AWJ11_11955	COG2801	Transposase and inactivated derivatives
AWJ11_11960	COG2826	transposase and inactivated derivatives, IS30 family
AWJ11_11975	COG2963	transposase activity
AWJ11_11980	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
AWJ11_11985	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
AWJ11_11990	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
AWJ11_11995	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
AWJ11_12000	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
AWJ11_12005	COG1028	Short-chain dehydrogenase reductase Sdr
AWJ11_12010	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
AWJ11_12015	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
AWJ11_12020	COG0416	fatty acid biosynthetic process
AWJ11_12025	COG0333	Belongs to the bacterial ribosomal protein bL32 family
AWJ11_12035	COG2823	Periplasmic or secreted lipoprotein
AWJ11_12040	COG3243	poly(R)-hydroxyalkanoic acid synthase
AWJ11_12065	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
AWJ11_12100	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
AWJ11_12105	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
AWJ11_12110	COG1127	ABC transporter
AWJ11_12115	COG0517	IMP dehydrogenase activity
AWJ11_12115	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
AWJ11_12130	COG1137	ATPase activity
AWJ11_12145	COG1660	Displays ATPase and GTPase activities
AWJ11_12155	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
AWJ11_12160	COG2941	Oxygenase that introduces the hydroxyl group at carbon five of 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol resulting in the formation of 2-nonaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4- benzoquinol
AWJ11_12170	COG0784	Response regulator, receiver
AWJ11_12170	COG0835	chemotaxis
AWJ11_12260	COG1586	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
AWJ11_12265	COG0512	Glutamine amidotransferase of anthranilate synthase
AWJ11_12270	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
AWJ11_12285	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
AWJ11_12305	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
AWJ11_12315	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
AWJ11_12320	COG2967	ApaG domain
AWJ11_12325	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
AWJ11_12335	COG2826	transposase and inactivated derivatives, IS30 family
AWJ11_12345	COG3385	transposase activity
AWJ11_12365	COG0815	Transfers the fatty acyl group on membrane lipoproteins
AWJ11_12370	COG4535	Mg2 and Co2 transporter CorC
AWJ11_12380	COG1702	phosphate starvation-inducible protein PhoH
AWJ11_12385	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
AWJ11_12390	COG0617	tRNA 3'-terminal CCA addition
AWJ11_12400	COG2826	transposase and inactivated derivatives, IS30 family
AWJ11_12435	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
AWJ11_12440	COG0724	RNA recognition motif
AWJ11_12445	COG4608	Belongs to the ABC transporter superfamily
AWJ11_12455	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
AWJ11_12460	COG0601	transmembrane transport
AWJ11_12465	COG0747	negative chemotaxis
AWJ11_12470	COG0527	aspartate kinase activity
AWJ11_12475	COG0019	diaminopimelate decarboxylase activity
AWJ11_12495	COG0463	Glycosyl transferase, family 2
AWJ11_12500	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
AWJ11_12505	COG2076	Multidrug Resistance protein
AWJ11_12510	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
AWJ11_12515	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
AWJ11_12580	COG3385	transposase activity
AWJ11_12585	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
AWJ11_12605	COG0328	RNA-DNA hybrid ribonuclease activity
AWJ11_12630	COG3385	transposase activity
AWJ11_12640	COG4166	transmembrane transport
AWJ11_12675	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
AWJ11_12690	COG0167	dihydroorotate dehydrogenase activity
AWJ11_12700	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
AWJ11_12700	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
AWJ11_12730	COG2217	Heavy metal translocating P-type atpase
AWJ11_12735	COG2217	Heavy metal translocating P-type atpase
AWJ11_12740	COG2217	Heavy metal translocating P-type atpase
AWJ11_12765	COG0242	peptide deformylase activity
AWJ11_12775	COG0835	chemotaxis
AWJ11_12775	COG0784	Response regulator, receiver
AWJ11_12785	COG0425	Belongs to the sulfur carrier protein TusA family
AWJ11_12970	COG2805	Type II/IV secretion system protein
AWJ11_13015	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
AWJ11_13035	COG2826	transposase and inactivated derivatives, IS30 family
AWJ11_13045	COG3385	transposase activity
AWJ11_13055	COG0071	Belongs to the small heat shock protein (HSP20) family
AWJ11_13060	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
AWJ11_13090	COG1131	(ABC) transporter
AWJ11_13100	COG4206	TonB-dependent receptor
AWJ11_13120	COG1280	lysine exporter protein (LysE YggA)
AWJ11_13125	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
AWJ11_13130	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
AWJ11_13135	COG3385	transposase activity
AWJ11_13155	COG3385	transposase activity
AWJ11_13175	COG2173	Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide
AWJ11_13180	COG4857	Catalyzes the phosphorylation of methylthioribose into methylthioribose-1-phosphate
AWJ11_13190	COG4229	Bifunctional enzyme that catalyzes the enolization of 2,3-diketo-5-methylthiopentyl-1-phosphate (DK-MTP-1-P) into the intermediate 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate (HK-MTPenyl-1-P), which is then dephosphorylated to form the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK- MTPene)
AWJ11_13200	COG0182	Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P)
AWJ11_13220	COG0306	phosphate transporter
AWJ11_13225	COG1392	Phosphate transport regulator
AWJ11_13260	COG3385	transposase activity
AWJ11_13275	COG0833	amino acid
AWJ11_13280	COG0114	fumarate hydratase activity
AWJ11_13300	COG3385	transposase activity
AWJ11_13305	COG3385	transposase activity
AWJ11_13420	COG2805	Type II/IV secretion system protein
AWJ11_13475	COG0586	Pfam SNARE associated Golgi protein
AWJ11_13480	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
AWJ11_13505	COG2826	transposase and inactivated derivatives, IS30 family
AWJ11_13510	COG1063	alcohol dehydrogenase
AWJ11_13515	COG0156	8-amino-7-oxononanoate synthase activity
AWJ11_13555	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
AWJ11_13570	COG0596	Alpha beta hydrolase
AWJ11_13585	COG1040	competence protein
AWJ11_13610	COG2870	Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose
AWJ11_13610	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
AWJ11_13615	COG0812	UDP-N-acetylmuramate dehydrogenase activity
AWJ11_13655	COG0561	phosphatase activity
AWJ11_13660	COG3316	Transposase and inactivated derivatives
AWJ11_13665	COG3385	transposase activity
AWJ11_13690	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
AWJ11_13700	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
AWJ11_13715	COG0776	regulation of translation
AWJ11_13720	COG0745	RESPONSE REGULATOR receiver
AWJ11_13735	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
AWJ11_13740	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
AWJ11_13745	COG3079	Belongs to the UPF0149 family
AWJ11_13765	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
AWJ11_13785	COG0494	nUDIX hydrolase
AWJ11_13790	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
AWJ11_13810	COG2826	transposase and inactivated derivatives, IS30 family
AWJ11_13840	COG3385	transposase activity
AWJ11_13850	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
AWJ11_13855	COG0321	lipoyl(octanoyl) transferase activity
AWJ11_13865	COG1686	Belongs to the peptidase S11 family
AWJ11_13875	COG2951	lytic endotransglycosylase activity
AWJ11_13880	COG0772	Belongs to the SEDS family
AWJ11_13885	COG0768	penicillin binding
AWJ11_13890	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
AWJ11_13900	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
AWJ11_13905	COG1466	dna polymerase III delta subunit
AWJ11_13915	COG0495	leucyl-tRNA aminoacylation
AWJ11_13940	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
AWJ11_13960	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
AWJ11_13965	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
AWJ11_13975	COG0018	arginyl-trna synthetase
AWJ11_13980	COG0218	Necessary for normal cell division and for the maintenance of normal septation
AWJ11_13985	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
AWJ11_14005	COG0180	Tryptophanyl-tRNA synthetase
AWJ11_14010	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
AWJ11_14015	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
AWJ11_14020	COG1253	flavin adenine dinucleotide binding
AWJ11_14040	COG3385	transposase activity
AWJ11_14060	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
AWJ11_14065	COG2814	Major facilitator Superfamily
AWJ11_14070	COG0203	ribosomal protein L17
AWJ11_14075	COG0202	RNA polymerase activity
AWJ11_14080	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
AWJ11_14085	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
AWJ11_14090	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
AWJ11_14100	COG0200	Binds to the 23S rRNA
AWJ11_14105	COG1841	ribosomal large subunit assembly
AWJ11_14110	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
AWJ11_14115	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
AWJ11_14120	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
AWJ11_14125	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
AWJ11_14130	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
AWJ11_14140	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
AWJ11_14150	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
AWJ11_14155	COG0255	Belongs to the universal ribosomal protein uL29 family
AWJ11_14160	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
AWJ11_14165	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
AWJ11_14170	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
AWJ11_14175	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
AWJ11_14180	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
AWJ11_14185	COG0089	rRNA binding
AWJ11_14195	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
AWJ11_14200	COG0051	transcription antitermination factor activity, RNA binding
AWJ11_14205	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
AWJ11_14210	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
AWJ11_14215	COG0049	tRNA binding
AWJ11_14220	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
AWJ11_14230	COG0085	RNA polymerase activity
AWJ11_14235	COG0222	ribosome binding
AWJ11_14240	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
AWJ11_14245	COG0081	regulation of translation
AWJ11_14250	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
AWJ11_14260	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
AWJ11_14295	COG1459	type II secretion system
AWJ11_14315	COG0237	dephospho-CoA kinase activity
AWJ11_14320	COG4582	Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity
AWJ11_14325	COG3024	Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase
AWJ11_14335	COG3130	regulation of translation
AWJ11_14340	COG0477	Major facilitator Superfamily
AWJ11_14350	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
AWJ11_14355	COG0484	heat shock protein binding
AWJ11_14360	COG0443	Heat shock 70 kDa protein
AWJ11_14365	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
AWJ11_14370	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
AWJ11_14375	COG0497	DNA recombination
AWJ11_14385	COG0735	belongs to the Fur family
AWJ11_14405	COG2867	negative regulation of translational initiation
AWJ11_14410	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
AWJ11_14415	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
AWJ11_14425	COG2066	Belongs to the glutaminase family
AWJ11_14435	COG1490	D-aminoacyl-tRNA deacylase activity
AWJ11_14445	COG2853	Lipoprotein
AWJ11_14455	COG2826	transposase and inactivated derivatives, IS30 family
AWJ11_14475	COG1028	Short-chain dehydrogenase reductase Sdr
AWJ11_14480	COG2826	transposase and inactivated derivatives, IS30 family
AWJ11_14485	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
AWJ11_14515	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
AWJ11_14520	COG0617	tRNA 3'-terminal CCA addition
AWJ11_14525	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
AWJ11_14535	COG1028	Short-chain dehydrogenase reductase Sdr
AWJ11_14555	COG3243	poly(R)-hydroxyalkanoic acid synthase
AWJ11_14565	COG1185	polyribonucleotide nucleotidyltransferase activity
AWJ11_14570	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
AWJ11_14575	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
AWJ11_14580	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
AWJ11_14585	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
AWJ11_14590	COG0195	Participates in both transcription termination and antitermination
AWJ11_14590	COG2251	uridine kinase activity
AWJ11_14605	COG1007	ATP synthesis coupled electron transport
AWJ11_14620	COG0713	ATP synthesis coupled electron transport
AWJ11_14625	COG0839	Belongs to the complex I subunit 6 family
AWJ11_14630	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
AWJ11_14635	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
AWJ11_14640	COG1034	ATP synthesis coupled electron transport
AWJ11_14640	COG1034	ATP synthesis coupled electron transport
AWJ11_14645	COG1894	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain
AWJ11_14650	COG1905	PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit
AWJ11_14655	COG0649	NAD binding
AWJ11_14660	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
AWJ11_14665	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
AWJ11_14670	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
AWJ11_14680	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
AWJ11_14685	COG0149	triose-phosphate isomerase activity
AWJ11_14705	COG1435	thymidine kinase activity
AWJ11_14720	COG2363	Small membrane protein
AWJ11_14735	COG0494	nUDIX hydrolase
AWJ11_14755	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
AWJ11_14765	COG0254	rRNA binding
AWJ11_14770	COG0281	malic enzyme
AWJ11_14785	COG2826	transposase and inactivated derivatives, IS30 family
AWJ11_14800	COG3186	Phenylalanine-4-hydroxylase
AWJ11_14815	COG0625	glutathione transferase activity
AWJ11_14820	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
AWJ11_14835	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
AWJ11_14835	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
AWJ11_14840	COG0708	Exodeoxyribonuclease III
AWJ11_14845	COG0330	HflC and HflK could
AWJ11_14850	COG1585	Membrane protein implicated in regulation of membrane protease activity
AWJ11_14875	COG3385	transposase activity
AWJ11_14895	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
AWJ11_14900	COG0227	Belongs to the bacterial ribosomal protein bL28 family
AWJ11_14905	COG0267	Belongs to the bacterial ribosomal protein bL33 family
AWJ11_14915	COG0534	Mate efflux family protein
AWJ11_14945	COG2801	Transposase and inactivated derivatives
AWJ11_14970	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
AWJ11_15025	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
AWJ11_15045	COG0248	Ppx GppA phosphatase
AWJ11_15060	COG0531	amino acid
AWJ11_15065	COG0174	glutamine synthetase
AWJ11_15070	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
AWJ11_15075	COG0668	transmembrane transport
AWJ11_15105	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
AWJ11_15115	COG2988	succinylglutamate desuccinylase activity
AWJ11_15140	COG2826	transposase and inactivated derivatives, IS30 family
AWJ11_15145	COG2271	Major facilitator Superfamily
AWJ11_15150	COG2814	Major facilitator Superfamily
AWJ11_15155	COG0583	DNA-binding transcription factor activity
AWJ11_15165	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
AWJ11_15170	COG4796	Type ii and iii secretion system protein
AWJ11_15220	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
AWJ11_15225	COG0017	Asparaginyl-tRNA synthetase
AWJ11_15230	COG4962	Type ii secretion system protein e
AWJ11_15255	COG3504	Conjugal transfer protein
AWJ11_15265	COG3451	type IV secretory pathway VirB4
AWJ11_15300	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
AWJ11_15320	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
AWJ11_15325	COG0606	chelatase, subunit chli
AWJ11_15335	COG0347	Belongs to the P(II) protein family
AWJ11_15340	COG1166	arginine decarboxylase activity
AWJ11_15350	COG0463	Glycosyl transferase, family 2
AWJ11_15355	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
AWJ11_15365	COG0133	tryptophan synthase activity
AWJ11_15370	COG0135	phosphoribosylanthranilate isomerase activity
AWJ11_15375	COG0134	indole-3-glycerol-phosphate synthase activity
AWJ11_15380	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
AWJ11_15385	COG0512	Glutamine amidotransferase of anthranilate synthase
AWJ11_15385	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
AWJ11_15420	COG0450	alkyl hydroperoxide reductase
AWJ11_15445	COG2826	transposase and inactivated derivatives, IS30 family
AWJ11_15450	COG3385	transposase activity
AWJ11_15455	COG3385	transposase activity
AWJ11_15500	COG1607	acyl-coa hydrolase
AWJ11_15505	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
AWJ11_15530	COG2828	Protein conserved in bacteria
AWJ11_15535	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
AWJ11_15540	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
AWJ11_15545	COG0569	domain protein
AWJ11_15550	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
AWJ11_15555	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
AWJ11_15560	COG0242	peptide deformylase activity
AWJ11_15565	COG0758	DNA mediated transformation
AWJ11_15570	COG2922	Belongs to the Smg family
AWJ11_15580	COG0009	L-threonylcarbamoyladenylate synthase
AWJ11_15585	COG0408	coproporphyrinogen oxidase activity
AWJ11_15595	COG2826	transposase and inactivated derivatives, IS30 family
AWJ11_15615	COG2826	transposase and inactivated derivatives, IS30 family
AWJ11_15630	COG3385	transposase activity
AWJ11_15655	COG1385	rRNA (uridine-N3-)-methyltransferase activity
AWJ11_15665	COG0793	Belongs to the peptidase S41A family
AWJ11_15675	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
AWJ11_15685	COG3385	transposase activity
AWJ11_15710	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
AWJ11_15710	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
AWJ11_15715	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
AWJ11_15725	COG3227	Zinc metalloprotease (Elastase)
AWJ11_15740	COG0456	acetyltransferase
AWJ11_15740	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
AWJ11_15780	COG0774	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
AWJ11_15785	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
AWJ11_15795	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
AWJ11_15800	COG1181	Belongs to the D-alanine--D-alanine ligase family
AWJ11_15805	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
AWJ11_15810	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
AWJ11_15815	COG0772	Belongs to the SEDS family
AWJ11_15820	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
AWJ11_15825	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
AWJ11_15830	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
AWJ11_15835	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
AWJ11_15850	COG0275	rRNA processing
AWJ11_15855	COG2983	Belongs to the UPF0260 family
AWJ11_15875	COG0187	DNA topoisomerase II activity
AWJ11_15885	COG0592	DNA-directed DNA polymerase activity
AWJ11_15905	COG2826	transposase and inactivated derivatives, IS30 family
AWJ11_15950	COG4115	mRNA cleavage
AWJ11_15955	COG3316	Transposase and inactivated derivatives
AWJ11_15995	COG3023	N-Acetylmuramoyl-L-alanine amidase
AWJ11_16000	COG3316	Transposase and inactivated derivatives
AWJ11_16055	COG5002	protein histidine kinase activity
AWJ11_16055	COG3850	Histidine kinase
AWJ11_16065	COG1196	nuclear chromosome segregation
AWJ11_16075	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
AWJ11_16080	COG1064	alcohol dehydrogenase
AWJ11_16100	COG4456	Virulence-associated protein
AWJ11_16105	COG1487	ribonuclease activity
AWJ11_16130	COG1802	Transcriptional regulator
AWJ11_16130	COG4626	Terminase
AWJ11_16135	COG1802	Transcriptional regulator
AWJ11_16135	COG4626	Terminase
AWJ11_16145	COG3316	Transposase and inactivated derivatives
AWJ11_16160	COG3316	Transposase and inactivated derivatives
AWJ11_16170	COG3316	Transposase and inactivated derivatives
AWJ11_16175	COG2826	transposase and inactivated derivatives, IS30 family
AWJ11_16260	COG3177	Filamentation induced by cAMP protein fic
AWJ11_16265	COG0842	Transport permease protein
AWJ11_16270	COG3316	Transposase and inactivated derivatives
AWJ11_16315	COG3316	Transposase and inactivated derivatives
AWJ11_16320	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
AWJ11_16325	COG3316	Transposase and inactivated derivatives
AWJ11_16355	COG0477	Major facilitator Superfamily
AWJ11_16365	COG2826	transposase and inactivated derivatives, IS30 family
AWJ11_16370	COG0724	RNA recognition motif
AWJ11_16375	COG2826	transposase and inactivated derivatives, IS30 family
AWJ11_16390	COG2826	transposase and inactivated derivatives, IS30 family
AWJ11_16395	COG2826	transposase and inactivated derivatives, IS30 family
AWJ11_16415	COG2826	transposase and inactivated derivatives, IS30 family
AWJ11_16450	COG3316	Transposase and inactivated derivatives
AWJ11_16475	COG3316	Transposase and inactivated derivatives
AWJ11_16480	COG2826	transposase and inactivated derivatives, IS30 family
AWJ11_16485	COG3316	Transposase and inactivated derivatives
AWJ11_16495	COG3316	Transposase and inactivated derivatives
AWJ11_16510	COG3316	Transposase and inactivated derivatives
AWJ11_16520	COG3316	Transposase and inactivated derivatives
AWJ11_16525	COG1506	peptidase
AWJ11_16525	COG0823	Involved in the tonB-independent uptake of proteins
AWJ11_16525	COG4946	Tricorn protease homolog
AWJ11_16555	COG2826	transposase and inactivated derivatives, IS30 family
AWJ11_16625	COG2826	transposase and inactivated derivatives, IS30 family
AWJ11_16640	COG2826	transposase and inactivated derivatives, IS30 family
AWJ11_16685	COG2826	transposase and inactivated derivatives, IS30 family
AWJ11_16700	COG2826	transposase and inactivated derivatives, IS30 family
AWJ11_16725	COG2826	transposase and inactivated derivatives, IS30 family
AWJ11_16750	COG2826	transposase and inactivated derivatives, IS30 family
AWJ11_16765	COG4974	Belongs to the 'phage' integrase family
AWJ11_16775	COG2826	transposase and inactivated derivatives, IS30 family
AWJ11_16790	COG1475	DNA binding
AWJ11_16795	COG1192	Involved in chromosome partitioning
AWJ11_16885	COG0484	heat shock protein binding
AWJ11_16900	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
AWJ11_16970	COG4115	mRNA cleavage
AWJ11_16980	COG4974	Belongs to the 'phage' integrase family
AWJ11_17020	COG1192	Involved in chromosome partitioning
AWJ11_17025	COG1475	DNA binding
AWJ11_17030	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
AWJ11_17040	COG0241	D,D-heptose 1,7-bisphosphate phosphatase