locus-tag class description CS374_00005 PF00133 tRNA synthetases class I (I, L, M and V) CS374_00005 PF08264 Anticodon-binding domain of tRNA CS374_00005 PF10458 Valyl tRNA synthetase tRNA binding arm CS374_00020 PF07992 Pyridine nucleotide-disulphide oxidoreductase CS374_00030 PF02397 Bacterial sugar transferase CS374_00045 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CS374_00060 PF13439 Glycosyltransferase Family 4 CS374_00060 PF00534 Glycosyl transferases group 1 CS374_00075 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CS374_00075 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CS374_00075 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CS374_00085 PF00501 AMP-binding enzyme CS374_00095 PF00534 Glycosyl transferases group 1 CS374_00105 PF00465 Iron-containing alcohol dehydrogenase CS374_00125 PF00849 RNA pseudouridylate synthase CS374_00125 PF01479 S4 domain CS374_00130 PF03186 CobD/Cbib protein CS374_00140 PF07685 CobB/CobQ-like glutamine amidotransferase domain CS374_00140 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CS374_00145 PF01923 Cobalamin adenosyltransferase CS374_00150 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CS374_00150 PF07685 CobB/CobQ-like glutamine amidotransferase domain CS374_00165 PF02754 Cysteine-rich domain CS374_00170 PF02589 LUD domain CS374_00170 PF13183 4Fe-4S dicluster domain CS374_00170 PF11870 Domain of unknown function (DUF3390) CS374_00175 PF02589 LUD domain CS374_00185 PF01389 OmpA-like transmembrane domain CS374_00185 PF00691 OmpA family CS374_00190 PF04055 Radical SAM superfamily CS374_00195 PF01242 6-pyruvoyl tetrahydropterin synthase CS374_00200 PF00648 Calpain family cysteine protease CS374_00210 PF13411 MerR HTH family regulatory protein CS374_00230 PF01520 N-acetylmuramoyl-L-alanine amidase CS374_00255 PF07664 Ferrous iron transport protein B C terminus CS374_00255 PF17910 FeoB cytosolic helical domain CS374_00255 PF02421 Ferrous iron transport protein B CS374_00255 PF07670 Nucleoside recognition CS374_00265 PF01699 Sodium/calcium exchanger protein CS374_00270 PF02863 Arginine repressor, C-terminal domain CS374_00270 PF01316 Arginine repressor, DNA binding domain CS374_00275 PF00884 Sulfatase CS374_00280 PF13361 UvrD-like helicase C-terminal domain CS374_00280 PF00580 UvrD/REP helicase N-terminal domain CS374_00290 PF00005 ABC transporter CS374_00290 PF17755 UvrA DNA-binding domain CS374_00290 PF17760 UvrA interaction domain CS374_00300 PF00005 ABC transporter CS374_00305 PF02405 Permease MlaE CS374_00325 PF02463 RecF/RecN/SMC N terminal domain CS374_00335 PF00425 chorismate binding enzyme CS374_00340 PF01063 Amino-transferase class IV CS374_00365 PF02896 PEP-utilising enzyme, TIM barrel domain CS374_00365 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain CS374_00365 PF00391 PEP-utilising enzyme, mobile domain CS374_00375 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain CS374_00375 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain CS374_00380 PF00919 Uncharacterized protein family UPF0004 CS374_00380 PF01938 TRAM domain CS374_00380 PF04055 Radical SAM superfamily CS374_00385 PF00005 ABC transporter CS374_00400 PF00392 Bacterial regulatory proteins, gntR family CS374_00415 PF00326 Prolyl oligopeptidase family CS374_00455 PF01370 NAD dependent epimerase/dehydratase family CS374_00455 PF08338 Domain of unknown function (DUF1731) CS374_00465 PF03129 Anticodon binding domain CS374_00465 PF02824 TGS domain CS374_00465 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CS374_00465 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CS374_00470 PF00707 Translation initiation factor IF-3, C-terminal domain CS374_00470 PF05198 Translation initiation factor IF-3, N-terminal domain CS374_00475 PF01632 Ribosomal protein L35 CS374_00480 PF00453 Ribosomal protein L20 CS374_00515 PF17243 POTRA domain TamA domain 1 CS374_00515 PF07244 Surface antigen variable number repeat CS374_00515 PF01103 Surface antigen CS374_00520 PF18317 Shikimate 5'-dehydrogenase C-terminal domain CS374_00520 PF01488 Shikimate / quinate 5-dehydrogenase CS374_00520 PF08501 Shikimate dehydrogenase substrate binding domain CS374_00525 PF01209 ubiE/COQ5 methyltransferase family CS374_00530 PF01259 SAICAR synthetase CS374_00535 PF02562 PhoH-like protein CS374_00555 PF02547 Queuosine biosynthesis protein CS374_00585 PF02666 Phosphatidylserine decarboxylase CS374_00590 PF01066 CDP-alcohol phosphatidyltransferase CS374_00600 PF09180 Prolyl-tRNA synthetase, C-terminal CS374_00600 PF03129 Anticodon binding domain CS374_00600 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CS374_00610 PF02390 Putative methyltransferase CS374_00615 PF10609 NUBPL iron-transfer P-loop NTPase CS374_00615 PF01883 Iron-sulfur cluster assembly protein CS374_00625 PF03631 Virulence factor BrkB CS374_00630 PF06574 FAD synthetase CS374_00630 PF01687 Riboflavin kinase CS374_00650 PF00692 dUTPase CS374_00655 PF04551 GcpE protein CS374_00660 PF00731 AIR carboxylase CS374_00665 PF01597 Glycine cleavage H-protein CS374_00685 PF13732 Domain of unknown function (DUF4162) CS374_00685 PF00005 ABC transporter CS374_00715 PF00690 Cation transporter/ATPase, N-terminus CS374_00715 PF00689 Cation transporting ATPase, C-terminus CS374_00725 PF00860 Permease family CS374_00730 PF08544 GHMP kinases C terminal CS374_00730 PF00288 GHMP kinases N terminal domain CS374_00735 PF04055 Radical SAM superfamily CS374_00735 PF08497 Radical SAM N-terminal CS374_00735 PF11842 Domain of unknown function (DUF3362) CS374_00740 PF14492 Elongation Factor G, domain II CS374_00740 PF03764 Elongation factor G, domain IV CS374_00740 PF00009 Elongation factor Tu GTP binding domain CS374_00740 PF00679 Elongation factor G C-terminus CS374_00745 PF12169 DNA polymerase III subunits gamma and tau domain III CS374_00765 PF00158 Sigma-54 interaction domain CS374_00765 PF00072 Response regulator receiver domain CS374_00765 PF02954 Bacterial regulatory protein, Fis family CS374_00770 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE CS374_00780 PF00265 Thymidine kinase CS374_00785 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) CS374_00790 PF02033 Ribosome-binding factor A CS374_00795 PF02687 FtsX-like permease family CS374_00795 PF12704 MacB-like periplasmic core domain CS374_00800 PF00535 Glycosyl transferase family 2 CS374_00805 PF01979 Amidohydrolase family CS374_00815 PF04138 GtrA-like protein CS374_00850 PF03313 Serine dehydratase alpha chain CS374_00870 PF01725 Ham1 family CS374_00885 PF07971 Glycosyl hydrolase family 92 CS374_00885 PF17678 Glycosyl hydrolase family 92 N-terminal domain CS374_00895 PF01654 Cytochrome bd terminal oxidase subunit I CS374_00905 PF01734 Patatin-like phospholipase CS374_00910 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CS374_00910 PF02806 Alpha amylase, C-terminal all-beta domain CS374_00910 PF00128 Alpha amylase, catalytic domain CS374_00915 PF00703 Glycosyl hydrolases family 2 CS374_00915 PF16353 Domain of unknown function(DUF4981) CS374_00915 PF02837 Glycosyl hydrolases family 2, sugar binding domain CS374_00915 PF02929 Beta galactosidase small chain CS374_00915 PF02836 Glycosyl hydrolases family 2, TIM barrel domain CS374_00925 PF04002 RadC-like JAB domain CS374_00930 PF03063 Prismane/CO dehydrogenase family CS374_00935 PF00245 Alkaline phosphatase CS374_00940 PF01321 Creatinase/Prolidase N-terminal domain CS374_00940 PF00557 Metallopeptidase family M24 CS374_00950 PF00793 DAHP synthetase I family CS374_00970 PF00154 recA bacterial DNA recombination protein CS374_00975 PF00578 AhpC/TSA family CS374_00990 PF12631 MnmE helical domain CS374_00990 PF10396 GTP-binding protein TrmE N-terminus CS374_00990 PF01926 50S ribosome-binding GTPase CS374_01085 PF02899 Phage integrase, N-terminal SAM-like domain CS374_01085 PF00589 Phage integrase family CS374_01260 PF01420 Type I restriction modification DNA specificity domain CS374_01360 PF10431 C-terminal, D2-small domain, of ClpB protein CS374_01360 PF02861 Clp amino terminal domain, pathogenicity island component CS374_01360 PF17871 AAA lid domain CS374_01360 PF07724 AAA domain (Cdc48 subfamily) CS374_01360 PF00004 ATPase family associated with various cellular activities (AAA) CS374_01375 PF05593 RHS Repeat CS374_01375 PF03527 RHS protein CS374_01450 PF01751 Toprim domain CS374_01450 PF01131 DNA topoisomerase CS374_01470 PF00440 Bacterial regulatory proteins, tetR family CS374_01505 PF13378 Enolase C-terminal domain-like CS374_01505 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CS374_01510 PF00378 Enoyl-CoA hydratase/isomerase CS374_01515 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CS374_01520 PF00425 chorismate binding enzyme CS374_01535 PF13173 AAA domain CS374_01535 PF13635 Domain of unknown function (DUF4143) CS374_01585 PF02673 Bacitracin resistance protein BacA CS374_01590 PF01509 TruB family pseudouridylate synthase (N terminal domain) CS374_01590 PF16198 tRNA pseudouridylate synthase B C-terminal domain CS374_01595 PF02547 Queuosine biosynthesis protein CS374_01600 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) CS374_01605 PF01136 Peptidase family U32 CS374_01615 PF03883 Peroxide stress protein YaaA CS374_01620 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CS374_01620 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CS374_01635 PF01640 Peptidase C10 family CS374_01635 PF13734 Spi protease inhibitor CS374_01650 PF00593 TonB dependent receptor CS374_01650 PF07715 TonB-dependent Receptor Plug Domain CS374_01655 PF11965 Domain of unknown function (DUF3479) CS374_01655 PF02514 CobN/Magnesium Chelatase CS374_01680 PF08669 Glycine cleavage T-protein C-terminal barrel domain CS374_01680 PF01571 Aminomethyltransferase folate-binding domain CS374_01685 PF16363 GDP-mannose 4,6 dehydratase CS374_01690 PF04321 RmlD substrate binding domain CS374_01695 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase CS374_01700 PF00483 Nucleotidyl transferase CS374_01715 PF00749 tRNA synthetases class I (E and Q), catalytic domain CS374_01730 PF16123 Hydroxyacylglutathione hydrolase C-terminus CS374_01730 PF00753 Metallo-beta-lactamase superfamily CS374_01735 PF01925 Sulfite exporter TauE/SafE CS374_01740 PF13545 Crp-like helix-turn-helix domain CS374_01740 PF00027 Cyclic nucleotide-binding domain CS374_01755 PF09827 CRISPR associated protein Cas2 CS374_01760 PF01867 CRISPR associated protein Cas1 CS374_01765 PF18070 CRISPR-Cas9 PI domain CS374_01765 PF18470 Cas9 alpha-helical lobe domain CS374_01765 PF18541 RuvC endonuclease subdomain 3 CS374_01765 PF13395 HNH endonuclease CS374_01765 PF18061 CRISPR-Cas9 WED domain CS374_01770 PF02910 Fumarate reductase flavoprotein C-term CS374_01770 PF00890 FAD binding domain CS374_01775 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain CS374_01775 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain CS374_01780 PF02445 Quinolinate synthetase A protein CS374_01785 PF17863 AAA lid domain CS374_01785 PF07726 ATPase family associated with various cellular activities (AAA) CS374_01790 PF01882 Protein of unknown function DUF58 CS374_01800 PF00092 von Willebrand factor type A domain CS374_01825 PF01569 PAP2 superfamily CS374_01830 PF02457 DisA bacterial checkpoint controller nucleotide-binding CS374_01835 PF00809 Pterin binding enzyme CS374_01855 PF07698 7TM receptor with intracellular HD hydrolase CS374_01855 PF07697 7TM-HD extracellular CS374_01855 PF01966 HD domain CS374_01860 PF01202 Shikimate kinase CS374_01870 PF00834 Ribulose-phosphate 3 epimerase family CS374_01890 PF08264 Anticodon-binding domain of tRNA CS374_01890 PF00133 tRNA synthetases class I (I, L, M and V) CS374_01895 PF01258 Prokaryotic dksA/traR C4-type zinc finger CS374_01900 PF01252 Signal peptidase (SPase) II CS374_01915 PF08279 HTH domain CS374_01915 PF03099 Biotin/lipoate A/B protein ligase family CS374_01915 PF02237 Biotin protein ligase C terminal domain CS374_01925 PF01725 Ham1 family CS374_01935 PF03051 Peptidase C1-like family CS374_01940 PF07885 Ion channel CS374_01950 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit CS374_01955 PF00364 Biotin-requiring enzyme CS374_01970 PF01039 Carboxyl transferase domain CS374_01985 PF00890 FAD binding domain CS374_01985 PF02910 Fumarate reductase flavoprotein C-term CS374_02000 PF00403 Heavy-metal-associated domain CS374_02005 PF00403 Heavy-metal-associated domain CS374_02010 PF01451 Low molecular weight phosphotyrosine protein phosphatase CS374_02015 PF01554 MatE CS374_02020 PF00578 AhpC/TSA family CS374_02025 PF01580 FtsK/SpoIIIE family CS374_02025 PF09397 Ftsk gamma domain CS374_02025 PF17854 FtsK alpha domain CS374_02025 PF13491 4TM region of DNA translocase FtsK/SpoIIIE CS374_02040 PF10509 Galactokinase galactose-binding signature CS374_02040 PF08544 GHMP kinases C terminal CS374_02040 PF00288 GHMP kinases N terminal domain CS374_02045 PF01263 Aldose 1-epimerase CS374_02090 PF00521 DNA gyrase/topoisomerase IV, subunit A CS374_02110 PF04301 Protein of unknown function (DUF452) CS374_02120 PF13396 Phospholipase_D-nuclease N-terminal CS374_02120 PF13091 PLD-like domain CS374_02125 PF02824 TGS domain CS374_02125 PF13291 ACT domain CS374_02125 PF04607 Region found in RelA / SpoT proteins CS374_02140 PF03061 Thioesterase superfamily CS374_02145 PF01427 D-ala-D-ala dipeptidase CS374_02160 PF01642 Methylmalonyl-CoA mutase CS374_02165 PF01642 Methylmalonyl-CoA mutase CS374_02165 PF02310 B12 binding domain CS374_02180 PF08281 Sigma-70, region 4 CS374_02180 PF04542 Sigma-70 region 2 CS374_02190 PF00005 ABC transporter CS374_02195 PF12704 MacB-like periplasmic core domain CS374_02195 PF02687 FtsX-like permease family CS374_02195 PF00005 ABC transporter CS374_02200 PF02687 FtsX-like permease family CS374_02200 PF00005 ABC transporter CS374_02200 PF12704 MacB-like periplasmic core domain CS374_02210 PF02321 Outer membrane efflux protein CS374_02280 PF01293 Phosphoenolpyruvate carboxykinase CS374_02285 PF00162 Phosphoglycerate kinase CS374_02295 PF00005 ABC transporter CS374_02305 PF00534 Glycosyl transferases group 1 CS374_02305 PF13579 Glycosyl transferase 4-like domain CS374_02325 PF01230 HIT domain CS374_02330 PF03449 Transcription elongation factor, N-terminal CS374_02330 PF01272 Transcription elongation factor, GreA/GreB, C-term CS374_02335 PF01300 Telomere recombination CS374_02345 PF00005 ABC transporter CS374_02350 PF00899 ThiF family CS374_02350 PF00581 Rhodanese-like domain CS374_02355 PF02618 YceG-like family CS374_02380 PF07722 Peptidase C26 CS374_02385 PF00204 DNA gyrase B CS374_02385 PF00986 DNA gyrase B subunit, carboxyl terminus CS374_02385 PF01751 Toprim domain CS374_02385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CS374_02390 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CS374_02390 PF03819 MazG nucleotide pyrophosphohydrolase domain CS374_02400 PF01479 S4 domain CS374_02400 PF00849 RNA pseudouridylate synthase CS374_02440 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region CS374_02440 PF01243 Pyridoxamine 5'-phosphate oxidase CS374_02455 PF00664 ABC transporter transmembrane region CS374_02455 PF00005 ABC transporter CS374_02465 PF00773 RNB domain CS374_02465 PF17876 Cold shock domain CS374_02465 PF08206 Ribonuclease B OB domain CS374_02465 PF00575 S1 RNA binding domain CS374_02480 PF01649 Ribosomal protein S20 CS374_02490 PF00814 Glycoprotease family CS374_02495 PF18146 Damage-inducible protein CinA KH domain CS374_02495 PF02464 Competence-damaged protein CS374_02495 PF00994 Probable molybdopterin binding domain CS374_02510 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CS374_02515 PF08534 Redoxin CS374_02520 PF01596 O-methyltransferase CS374_02530 PF01220 Dehydroquinase class II CS374_02535 PF00589 Phage integrase family CS374_02535 PF02899 Phage integrase, N-terminal SAM-like domain CS374_02550 PF09297 NADH pyrophosphatase zinc ribbon domain CS374_02550 PF00293 NUDIX domain CS374_02555 PF00480 ROK family CS374_02565 PF02541 Ppx/GppA phosphatase family CS374_02570 PF10415 Fumarase C C-terminus CS374_02570 PF00206 Lyase CS374_02575 PF00793 DAHP synthetase I family CS374_02580 PF00485 Phosphoribulokinase / Uridine kinase family CS374_02590 PF00085 Thioredoxin CS374_02605 PF01595 Cyclin M transmembrane N-terminal domain CS374_02605 PF03471 Transporter associated domain CS374_02605 PF00571 CBS domain CS374_02610 PF00436 Single-strand binding protein family CS374_02615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CS374_02615 PF03466 LysR substrate binding domain CS374_02620 PF03372 Endonuclease/Exonuclease/phosphatase family CS374_02630 PF00750 tRNA synthetases class I (R) CS374_02630 PF03485 Arginyl tRNA synthetase N terminal domain CS374_02630 PF05746 DALR anticodon binding domain CS374_02640 PF00579 tRNA synthetases class I (W and Y) CS374_02645 PF01458 Uncharacterized protein family (UPF0051) CS374_02650 PF00005 ABC transporter CS374_02655 PF01458 Uncharacterized protein family (UPF0051) CS374_02665 PF04760 Translation initiation factor IF-2, N-terminal region CS374_02665 PF11987 Translation-initiation factor 2 CS374_02665 PF00009 Elongation factor Tu GTP binding domain CS374_02670 PF08529 NusA N-terminal domain CS374_02670 PF13184 NusA-like KH domain CS374_02670 PF00575 S1 RNA binding domain CS374_02675 PF02576 RimP N-terminal domain CS374_02685 PF00682 HMGL-like CS374_02685 PF02436 Conserved carboxylase domain CS374_02710 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CS374_02720 PF13419 Haloacid dehalogenase-like hydrolase CS374_02730 PF03167 Uracil DNA glycosylase superfamily CS374_02740 PF13180 PDZ domain CS374_02740 PF01471 Putative peptidoglycan binding domain CS374_02740 PF03572 Peptidase family S41 CS374_02755 PF18496 Collagenase G catalytic helper subdomain CS374_02755 PF08453 Peptidase family M9 N-terminal CS374_02755 PF01752 Collagenase CS374_02760 PF07075 Protein of unknown function (DUF1343) CS374_02765 PF00923 Transaldolase/Fructose-6-phosphate aldolase CS374_02780 PF18073 Rubredoxin metal binding domain CS374_02790 PF01914 MarC family integral membrane protein CS374_02850 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CS374_02850 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CS374_02855 PF05175 Methyltransferase small domain CS374_02860 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CS374_02865 PF01888 CbiD CS374_02870 PF01226 Formate/nitrite transporter CS374_02880 PF16658 Class II release factor RF3, C-terminal domain CS374_02880 PF00009 Elongation factor Tu GTP binding domain CS374_02880 PF03144 Elongation factor Tu domain 2 CS374_02900 PF00825 Ribonuclease P CS374_02905 PF01809 Putative membrane protein insertion efficiency factor CS374_02910 PF01026 TatD related DNase CS374_02915 PF05656 Protein of unknown function (DUF805) CS374_02930 PF00675 Insulinase (Peptidase family M16) CS374_02930 PF05193 Peptidase M16 inactive domain CS374_02935 PF02915 Rubrerythrin CS374_02945 PF03938 Outer membrane protein (OmpH-like) CS374_02950 PF07244 Surface antigen variable number repeat CS374_02950 PF01103 Surface antigen CS374_02955 PF01255 Putative undecaprenyl diphosphate synthase CS374_02980 PF07715 TonB-dependent Receptor Plug Domain CS374_02980 PF00593 TonB dependent receptor CS374_02995 PF13519 von Willebrand factor type A domain CS374_03000 PF06321 Major fimbrial subunit protein (FimA) CS374_03005 PF08842 Fimbrillin-A associated anchor proteins Mfa1 and Mfa2 CS374_03010 PF08842 Fimbrillin-A associated anchor proteins Mfa1 and Mfa2 CS374_03015 PF15495 Major fimbrial subunit protein type IV, Fimbrillin, C-terminal CS374_03025 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CS374_03025 PF07992 Pyridine nucleotide-disulphide oxidoreductase CS374_03040 PF00149 Calcineurin-like phosphoesterase CS374_03040 PF02872 5'-nucleotidase, C-terminal domain CS374_03045 PF01588 Putative tRNA binding domain CS374_03045 PF09334 tRNA synthetases class I (M) CS374_03115 PF08275 DNA primase catalytic core, N-terminal domain CS374_03115 PF01807 CHC2 zinc finger CS374_03240 PF00005 ABC transporter CS374_03240 PF00664 ABC transporter transmembrane region CS374_03240 PF03412 Peptidase C39 family CS374_03260 PF17932 Tetracyclin repressor-like, C-terminal domain CS374_03260 PF00440 Bacterial regulatory proteins, tetR family CS374_03320 PF14659 Phage integrase, N-terminal SAM-like domain CS374_03320 PF00589 Phage integrase family CS374_03325 PF01386 Ribosomal L25p family CS374_03325 PF14693 Ribosomal protein TL5, C-terminal domain CS374_03330 PF01195 Peptidyl-tRNA hydrolase CS374_03335 PF01479 S4 domain CS374_03345 PF00365 Phosphofructokinase CS374_03350 PF08281 Sigma-70, region 4 CS374_03350 PF04542 Sigma-70 region 2 CS374_03360 PF01431 Peptidase family M13 CS374_03360 PF05649 Peptidase family M13 CS374_03370 PF00156 Phosphoribosyl transferase domain CS374_03375 PF02631 RecX family CS374_03380 PF17827 PrmC N-terminal domain CS374_03380 PF05175 Methyltransferase small domain CS374_03385 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CS374_03385 PF01872 RibD C-terminal domain CS374_03390 PF00152 tRNA synthetases class II (D, K and N) CS374_03390 PF01336 OB-fold nucleic acid binding domain CS374_03390 PF02938 GAD domain CS374_03395 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CS374_03400 PF00448 SRP54-type protein, GTPase domain CS374_03400 PF02881 SRP54-type protein, helical bundle domain CS374_03405 PF04055 Radical SAM superfamily CS374_03405 PF00919 Uncharacterized protein family UPF0004 CS374_03405 PF18693 TRAM domain CS374_03415 PF00072 Response regulator receiver domain CS374_03415 PF00158 Sigma-54 interaction domain CS374_03415 PF02954 Bacterial regulatory protein, Fis family CS374_03435 PF04371 Porphyromonas-type peptidyl-arginine deiminase CS374_03445 PF13614 AAA domain CS374_03450 PF17762 HTH domain found in ParB protein CS374_03450 PF02195 ParB-like nuclease domain CS374_03465 PF00698 Acyl transferase domain CS374_03470 PF07687 Peptidase dimerisation domain CS374_03470 PF01546 Peptidase family M20/M25/M40 CS374_03480 PF00398 Ribosomal RNA adenine dimethylase CS374_03485 PF00571 CBS domain CS374_03485 PF01769 Divalent cation transporter CS374_03485 PF03448 MgtE intracellular N domain CS374_03505 PF00300 Histidine phosphatase superfamily (branch 1) CS374_03510 PF00534 Glycosyl transferases group 1 CS374_03520 PF00762 Ferrochelatase CS374_03535 PF01205 Uncharacterized protein family UPF0029 CS374_03535 PF09186 Domain of unknown function (DUF1949) CS374_03545 PF00216 Bacterial DNA-binding protein CS374_03550 PF02350 UDP-N-acetylglucosamine 2-epimerase CS374_03555 PF03808 Glycosyl transferase WecB/TagA/CpsF family CS374_03570 PF12464 Maltose acetyltransferase CS374_03570 PF00132 Bacterial transferase hexapeptide (six repeats) CS374_03570 PF14602 Hexapeptide repeat of succinyl-transferase CS374_03595 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CS374_03595 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CS374_03595 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CS374_03600 PF00953 Glycosyl transferase family 4 CS374_03610 PF01751 Toprim domain CS374_03610 PF01131 DNA topoisomerase CS374_03660 PF04371 Porphyromonas-type peptidyl-arginine deiminase CS374_03675 PF00202 Aminotransferase class-III CS374_03680 PF06968 Biotin and Thiamin Synthesis associated domain CS374_03680 PF04055 Radical SAM superfamily CS374_03685 PF00854 POT family CS374_03710 PF00579 tRNA synthetases class I (W and Y) CS374_03720 PF02590 Predicted SPOUT methyltransferase CS374_03725 PF01641 SelR domain CS374_03725 PF01625 Peptide methionine sulfoxide reductase CS374_03725 PF08534 Redoxin CS374_03740 PF02152 Dihydroneopterin aldolase CS374_03765 PF14572 Phosphoribosyl synthetase-associated domain CS374_03765 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CS374_03770 PF00271 Helicase conserved C-terminal domain CS374_03770 PF00270 DEAD/DEAH box helicase CS374_03820 PF04055 Radical SAM superfamily CS374_03820 PF06968 Biotin and Thiamin Synthesis associated domain CS374_03825 PF05690 Thiazole biosynthesis protein ThiG CS374_03830 PF02581 Thiamine monophosphate synthase CS374_03835 PF01964 Radical SAM ThiC family CS374_03835 PF13667 ThiC-associated domain CS374_03870 PF00886 Ribosomal protein S16 CS374_03880 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CS374_03880 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CS374_03885 PF00753 Metallo-beta-lactamase superfamily CS374_03890 PF17763 Glutaminase/Asparaginase C-terminal domain CS374_03890 PF00710 Asparaginase, N-terminal CS374_03900 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CS374_03900 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CS374_03910 PF01168 Alanine racemase, N-terminal domain CS374_03945 PF06321 Major fimbrial subunit protein (FimA) CS374_03950 PF08842 Fimbrillin-A associated anchor proteins Mfa1 and Mfa2 CS374_03955 PF06321 Major fimbrial subunit protein (FimA) CS374_03980 PF01783 Ribosomal L32p protein family CS374_03985 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CS374_03985 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CS374_03990 PF07650 KH domain CS374_03990 PF01926 50S ribosome-binding GTPase CS374_03995 PF01926 50S ribosome-binding GTPase CS374_03995 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal CS374_04005 PF01522 Polysaccharide deacetylase CS374_04010 PF01266 FAD dependent oxidoreductase CS374_04010 PF05430 S-adenosyl-L-methionine-dependent methyltransferase CS374_04020 PF00860 Permease family CS374_04060 PF04452 RNA methyltransferase CS374_04070 PF02657 Fe-S metabolism associated domain CS374_04090 PF02684 Lipid-A-disaccharide synthetase CS374_04095 PF01975 Survival protein SurE CS374_04105 PF03129 Anticodon binding domain CS374_04135 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CS374_04135 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CS374_04165 PF00970 Oxidoreductase FAD-binding domain CS374_04165 PF00111 2Fe-2S iron-sulfur cluster binding domain CS374_04165 PF00175 Oxidoreductase NAD-binding domain CS374_04170 PF02508 Rnf-Nqr subunit, membrane protein CS374_04175 PF02508 Rnf-Nqr subunit, membrane protein CS374_04180 PF04205 FMN-binding domain CS374_04185 PF03116 NQR2, RnfD, RnfE family CS374_04190 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) CS374_04190 PF11973 NQRA C-terminal domain CS374_04210 PF01040 UbiA prenyltransferase family CS374_04215 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CS374_04215 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CS374_04220 PF01842 ACT domain CS374_04220 PF00696 Amino acid kinase family CS374_04225 PF00005 ABC transporter CS374_04230 PF01476 LysM domain CS374_04230 PF01551 Peptidase family M23 CS374_04230 PF08525 Opacity-associated protein A N-terminal motif CS374_04235 PF01926 50S ribosome-binding GTPase CS374_04235 PF06071 Protein of unknown function (DUF933) CS374_04240 PF01434 Peptidase family M41 CS374_04240 PF00004 ATPase family associated with various cellular activities (AAA) CS374_04240 PF17862 AAA+ lid domain CS374_04250 PF00183 Hsp90 protein CS374_04250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CS374_04260 PF07691 PA14 domain CS374_04260 PF02838 Glycosyl hydrolase family 20, domain 2 CS374_04260 PF00728 Glycosyl hydrolase family 20, catalytic domain CS374_04265 PF00464 Serine hydroxymethyltransferase CS374_04275 PF01245 Ribosomal protein L19 CS374_04280 PF02811 PHP domain CS374_04280 PF01336 OB-fold nucleic acid binding domain CS374_04280 PF14579 Helix-hairpin-helix motif CS374_04280 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CS374_04280 PF07733 Bacterial DNA polymerase III alpha NTPase domain CS374_04285 PF00085 Thioredoxin CS374_04295 PF02646 RmuC family CS374_04315 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CS374_04325 PF00588 SpoU rRNA Methylase family CS374_04325 PF08032 RNA 2'-O ribose methyltransferase substrate binding CS374_04330 PF02542 YgbB family CS374_04345 PF01557 Fumarylacetoacetate (FAA) hydrolase family CS374_04350 PF02629 CoA binding domain CS374_04350 PF06971 Putative DNA-binding protein N-terminus CS374_04355 PF01740 STAS domain CS374_04355 PF00916 Sulfate permease family CS374_04360 PF01207 Dihydrouridine synthase (Dus) CS374_04375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CS374_04375 PF00512 His Kinase A (phospho-acceptor) domain CS374_04380 PF02954 Bacterial regulatory protein, Fis family CS374_04380 PF00072 Response regulator receiver domain CS374_04380 PF00158 Sigma-54 interaction domain CS374_04385 PF04029 2-phosphosulpholactate phosphatase CS374_04395 PF00933 Glycosyl hydrolase family 3 N terminal domain CS374_04395 PF01915 Glycosyl hydrolase family 3 C-terminal domain CS374_04400 PF17871 AAA lid domain CS374_04400 PF02861 Clp amino terminal domain, pathogenicity island component CS374_04400 PF00004 ATPase family associated with various cellular activities (AAA) CS374_04400 PF07724 AAA domain (Cdc48 subfamily) CS374_04400 PF10431 C-terminal, D2-small domain, of ClpB protein CS374_04420 PF00149 Calcineurin-like phosphoesterase CS374_04425 PF02146 Sir2 family CS374_04435 PF00132 Bacterial transferase hexapeptide (six repeats) CS374_04440 PF00308 Bacterial dnaA protein CS374_04440 PF11638 DnaA N-terminal domain CS374_04440 PF08299 Bacterial dnaA protein helix-turn-helix CS374_04480 PF04055 Radical SAM superfamily CS374_04480 PF00919 Uncharacterized protein family UPF0004 CS374_04495 PF02386 Cation transport protein CS374_04500 PF02254 TrkA-N domain CS374_04500 PF02080 TrkA-C domain CS374_04505 PF13292 1-deoxy-D-xylulose-5-phosphate synthase CS374_04505 PF02779 Transketolase, pyrimidine binding domain CS374_04505 PF02780 Transketolase, C-terminal domain CS374_04520 PF01050 Mannose-6-phosphate isomerase CS374_04520 PF00483 Nucleotidyl transferase CS374_04555 PF17760 UvrA interaction domain CS374_04555 PF17755 UvrA DNA-binding domain CS374_04570 PF00005 ABC transporter CS374_04570 PF12848 ABC transporter CS374_04575 PF02558 Ketopantoate reductase PanE/ApbA CS374_04575 PF08546 Ketopantoate reductase PanE/ApbA C terminal CS374_04580 PF07703 Alpha-2-macroglobulin bait region domain CS374_04580 PF00207 Alpha-2-macroglobulin family CS374_04580 PF01835 MG2 domain CS374_04585 PF03652 Holliday junction resolvase CS374_04590 PF01327 Polypeptide deformylase CS374_04600 PF00005 ABC transporter CS374_04600 PF16326 ABC transporter C-terminal domain CS374_04600 PF12848 ABC transporter CS374_04605 PF01364 Peptidase family C25 CS374_04605 PF03785 Peptidase family C25, C terminal ig-like domain CS374_04605 PF18630 Peptidase M60 C-terminal domain CS374_04605 PF08126 Propeptide_C25 CS374_04625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CS374_04625 PF00512 His Kinase A (phospho-acceptor) domain CS374_04625 PF00989 PAS fold CS374_04630 PF10141 Single-strand DNA-specific exonuclease, C terminal domain CS374_04630 PF02272 DHHA1 domain CS374_04630 PF01368 DHH family CS374_04630 PF17768 RecJ OB domain CS374_04645 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain CS374_04645 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family CS374_04650 PF01467 Cytidylyltransferase-like CS374_04665 PF02638 Glycosyl hydrolase-like 10 CS374_04670 PF05970 PIF1-like helicase CS374_04680 PF00873 AcrB/AcrD/AcrF family CS374_04695 PF01256 Carbohydrate kinase CS374_04695 PF03853 YjeF-related protein N-terminus CS374_04700 PF00132 Bacterial transferase hexapeptide (six repeats) CS374_04700 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 CS374_04705 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase CS374_04705 PF07977 FabA-like domain CS374_04710 PF00132 Bacterial transferase hexapeptide (six repeats) CS374_04710 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD CS374_04715 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CS374_04720 PF03462 PCRF domain CS374_04720 PF00472 RF-1 domain CS374_04725 PF00586 AIR synthase related protein, N-terminal domain CS374_04725 PF02769 AIR synthase related protein, C-terminal domain CS374_04730 PF01476 LysM domain CS374_04730 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase CS374_04765 PF03313 Serine dehydratase alpha chain CS374_04765 PF03315 Serine dehydratase beta chain CS374_04775 PF00270 DEAD/DEAH box helicase CS374_04775 PF00271 Helicase conserved C-terminal domain CS374_04780 PF00571 CBS domain CS374_04780 PF01380 SIS domain CS374_04795 PF00210 Ferritin-like domain CS374_04820 PF01624 MutS domain I CS374_04820 PF05190 MutS family domain IV CS374_04820 PF05192 MutS domain III CS374_04820 PF05188 MutS domain II CS374_04820 PF00488 MutS domain V CS374_04825 PF01709 Transcriptional regulator CS374_04830 PF01588 Putative tRNA binding domain CS374_04830 PF03147 Ferredoxin-fold anticodon binding domain CS374_04830 PF03484 tRNA synthetase B5 domain CS374_04830 PF03483 B3/4 domain CS374_04830 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain CS374_04880 PF12705 PD-(D/E)XK nuclease superfamily CS374_04880 PF00580 UvrD/REP helicase N-terminal domain CS374_04880 PF13361 UvrD-like helicase C-terminal domain CS374_04900 PF01467 Cytidylyltransferase-like CS374_04905 PF04166 Pyridoxal phosphate biosynthetic protein PdxA CS374_04915 PF04055 Radical SAM superfamily CS374_04930 PF13393 Histidyl-tRNA synthetase CS374_04930 PF03129 Anticodon binding domain CS374_04935 PF00186 Dihydrofolate reductase CS374_04940 PF00303 Thymidylate synthase CS374_04975 PF08126 Propeptide_C25 CS374_04975 PF03785 Peptidase family C25, C terminal ig-like domain CS374_04975 PF07675 Cleaved Adhesin Domain CS374_04975 PF01364 Peptidase family C25 CS374_04975 PF10365 Domain of unknown function (DUF2436) CS374_04980 PF01180 Dihydroorotate dehydrogenase CS374_04995 PF00701 Dihydrodipicolinate synthetase family CS374_05015 PF14493 Helix-turn-helix domain CS374_05015 PF05970 PIF1-like helicase CS374_05020 PF01171 PP-loop family CS374_05020 PF11734 TilS substrate C-terminal domain CS374_05030 PF01784 NIF3 (NGG1p interacting factor 3) CS374_05040 PF08534 Redoxin CS374_05055 PF01510 N-acetylmuramoyl-L-alanine amidase CS374_05065 PF00520 Ion transport protein CS374_05065 PF00027 Cyclic nucleotide-binding domain CS374_05070 PF01746 tRNA (Guanine-1)-methyltransferase CS374_05075 PF00970 Oxidoreductase FAD-binding domain CS374_05075 PF00175 Oxidoreductase NAD-binding domain CS374_05075 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B CS374_05080 PF07992 Pyridine nucleotide-disulphide oxidoreductase CS374_05080 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CS374_05085 PF00271 Helicase conserved C-terminal domain CS374_05085 PF00270 DEAD/DEAH box helicase CS374_05085 PF17764 3′ DNA-binding domain (3′BD) CS374_05085 PF18319 PriA DNA helicase Cys-rich region (CRR) domain CS374_05085 PF18074 Primosomal protein N C-terminal domain CS374_05105 PF04073 Aminoacyl-tRNA editing domain CS374_05115 PF00300 Histidine phosphatase superfamily (branch 1) CS374_05140 PF03785 Peptidase family C25, C terminal ig-like domain CS374_05140 PF08126 Propeptide_C25 CS374_05140 PF01364 Peptidase family C25 CS374_05140 PF10365 Domain of unknown function (DUF2436) CS374_05140 PF07675 Cleaved Adhesin Domain CS374_05150 PF00551 Formyl transferase CS374_05150 PF02911 Formyl transferase, C-terminal domain CS374_05160 PF16347 Domain of unknown function (DUF4976) CS374_05160 PF00884 Sulfatase CS374_05180 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CS374_05180 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CS374_05180 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CS374_05180 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CS374_05185 PF11967 Recombination protein O N terminal CS374_05185 PF02565 Recombination protein O C terminal CS374_05190 PF07715 TonB-dependent Receptor Plug Domain CS374_05190 PF00593 TonB dependent receptor CS374_05200 PF03601 Conserved hypothetical protein 698 CS374_05205 PF01966 HD domain CS374_05205 PF13286 Phosphohydrolase-associated domain CS374_05210 PF01113 Dihydrodipicolinate reductase, N-terminus CS374_05210 PF05173 Dihydrodipicolinate reductase, C-terminus CS374_05215 PF10502 Signal peptidase, peptidase S26 CS374_05230 PF00348 Polyprenyl synthetase CS374_05235 PF01791 DeoC/LacD family aldolase CS374_05245 PF02580 D-Tyr-tRNA(Tyr) deacylase CS374_05250 PF08459 UvrC Helix-hairpin-helix N-terminal CS374_05250 PF01541 GIY-YIG catalytic domain CS374_05255 PF13932 GidA associated domain CS374_05255 PF01134 Glucose inhibited division protein A CS374_05305 PF00924 Mechanosensitive ion channel CS374_05305 PF05552 Conserved TM helix CS374_05310 PF00654 Voltage gated chloride channel CS374_05315 PF02397 Bacterial sugar transferase CS374_05320 PF01300 Telomere recombination CS374_05325 PF13018 Extended Signal Peptide of Type V secretion system CS374_05325 PF05860 haemagglutination activity domain CS374_05325 PF03543 Yersinia/Haemophilus virulence surface antigen CS374_05325 PF13332 Hemagglutinin repeat CS374_05325 PF02661 Fic/DOC family CS374_05340 PF00830 Ribosomal L28 family CS374_05345 PF00471 Ribosomal protein L33 CS374_05355 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain CS374_05355 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain CS374_05360 PF01370 NAD dependent epimerase/dehydratase family CS374_05375 PF00749 tRNA synthetases class I (E and Q), catalytic domain CS374_05375 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain CS374_05380 PF01594 AI-2E family transporter CS374_05395 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CS374_05395 PF00056 lactate/malate dehydrogenase, NAD binding domain CS374_05410 PF00950 ABC 3 transport family CS374_05420 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CS374_05435 PF00164 Ribosomal protein S12/S23 CS374_05440 PF00177 Ribosomal protein S7p/S5e CS374_05445 PF03144 Elongation factor Tu domain 2 CS374_05445 PF00679 Elongation factor G C-terminus CS374_05445 PF14492 Elongation Factor G, domain II CS374_05445 PF03764 Elongation factor G, domain IV CS374_05445 PF00009 Elongation factor Tu GTP binding domain CS374_05450 PF00338 Ribosomal protein S10p/S20e CS374_05455 PF00297 Ribosomal protein L3 CS374_05460 PF00573 Ribosomal protein L4/L1 family CS374_05465 PF00276 Ribosomal protein L23 CS374_05470 PF03947 Ribosomal Proteins L2, C-terminal domain CS374_05470 PF00181 Ribosomal Proteins L2, RNA binding domain CS374_05475 PF00203 Ribosomal protein S19 CS374_05480 PF00237 Ribosomal protein L22p/L17e CS374_05485 PF07650 KH domain CS374_05485 PF00189 Ribosomal protein S3, C-terminal domain CS374_05490 PF00252 Ribosomal protein L16p/L10e CS374_05495 PF00831 Ribosomal L29 protein CS374_05500 PF00366 Ribosomal protein S17 CS374_05505 PF00238 Ribosomal protein L14p/L23e CS374_05510 PF00467 KOW motif CS374_05510 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 CS374_05515 PF00281 Ribosomal protein L5 CS374_05515 PF00673 ribosomal L5P family C-terminus CS374_05520 PF00253 Ribosomal protein S14p/S29e CS374_05525 PF00410 Ribosomal protein S8 CS374_05530 PF00347 Ribosomal protein L6 CS374_05535 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast CS374_05540 PF00333 Ribosomal protein S5, N-terminal domain CS374_05540 PF03719 Ribosomal protein S5, C-terminal domain CS374_05545 PF00327 Ribosomal protein L30p/L7e CS374_05550 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A CS374_05555 PF00344 SecY translocase CS374_05560 PF00557 Metallopeptidase family M24 CS374_05565 PF01176 Translation initiation factor 1A / IF-1 CS374_05570 PF00444 Ribosomal protein L36 CS374_05575 PF00416 Ribosomal protein S13/S18 CS374_05580 PF00411 Ribosomal protein S11 CS374_05585 PF00163 Ribosomal protein S4/S9 N-terminal domain CS374_05585 PF01479 S4 domain CS374_05590 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain CS374_05590 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain CS374_05590 PF01000 RNA polymerase Rpb3/RpoA insert domain CS374_05595 PF01196 Ribosomal protein L17 CS374_05610 PF00696 Amino acid kinase family CS374_05615 PF01765 Ribosome recycling factor CS374_05620 PF16745 RsgA N-terminal domain CS374_05620 PF03193 RsgA GTPase CS374_05640 PF02773 S-adenosylmethionine synthetase, C-terminal domain CS374_05640 PF00438 S-adenosylmethionine synthetase, N-terminal domain CS374_05640 PF02772 S-adenosylmethionine synthetase, central domain CS374_05700 PF01076 Plasmid recombination enzyme CS374_05735 PF02384 N-6 DNA Methylase CS374_05740 PF01420 Type I restriction modification DNA specificity domain CS374_05745 PF01420 Type I restriction modification DNA specificity domain CS374_05750 PF13166 AAA domain CS374_05790 PF01432 Peptidase family M3 CS374_05805 PF00999 Sodium/hydrogen exchanger family CS374_05810 PF02806 Alpha amylase, C-terminal all-beta domain CS374_05810 PF00128 Alpha amylase, catalytic domain CS374_05810 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CS374_05815 PF00476 DNA polymerase family A CS374_05815 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CS374_05815 PF01367 5'-3' exonuclease, C-terminal SAM fold CS374_05815 PF01612 3'-5' exonuclease CS374_05825 PF13426 PAS domain CS374_05825 PF08448 PAS fold CS374_05825 PF00512 His Kinase A (phospho-acceptor) domain CS374_05825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CS374_05825 PF00072 Response regulator receiver domain CS374_05850 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CS374_05850 PF02874 ATP synthase alpha/beta family, beta-barrel domain CS374_05850 PF16886 ATPsynthase alpha/beta subunit N-term extension CS374_05855 PF02874 ATP synthase alpha/beta family, beta-barrel domain CS374_05855 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CS374_05865 PF01496 V-type ATPase 116kDa subunit family CS374_05875 PF02824 TGS domain CS374_05875 PF13291 ACT domain CS374_05875 PF04607 Region found in RelA / SpoT proteins CS374_05905 PF10410 DnaB-helicase binding domain of primase CS374_05905 PF08275 DNA primase catalytic core, N-terminal domain CS374_05905 PF01807 CHC2 zinc finger CS374_05910 PF02348 Cytidylyltransferase CS374_05915 PF02525 Flavodoxin-like fold CS374_05920 PF01578 Cytochrome C assembly protein CS374_05930 PF02335 Cytochrome c552 CS374_05935 PF03264 NapC/NirT cytochrome c family, N-terminal region CS374_05950 PF03952 Enolase, N-terminal domain CS374_05950 PF00113 Enolase, C-terminal TIM barrel domain CS374_05960 PF08281 Sigma-70, region 4 CS374_05960 PF04542 Sigma-70 region 2 CS374_05970 PF00501 AMP-binding enzyme CS374_05980 PF00570 HRDC domain CS374_05980 PF00270 DEAD/DEAH box helicase CS374_05980 PF00271 Helicase conserved C-terminal domain CS374_05980 PF16124 RecQ zinc-binding CS374_05980 PF09382 RQC domain CS374_05995 PF00534 Glycosyl transferases group 1 CS374_05995 PF08323 Starch synthase catalytic domain CS374_06005 PF03825 Nucleoside H+ symporter CS374_06040 PF01042 Endoribonuclease L-PSP CS374_06045 PF08032 RNA 2'-O ribose methyltransferase substrate binding CS374_06045 PF00588 SpoU rRNA Methylase family CS374_06050 PF02463 RecF/RecN/SMC N terminal domain CS374_06060 PF02441 Flavoprotein CS374_06060 PF04127 DNA / pantothenate metabolism flavoprotein CS374_06065 PF11490 DNA polymerase III polC-type N-terminus II CS374_06065 PF00929 Exonuclease CS374_06065 PF07733 Bacterial DNA polymerase III alpha NTPase domain CS374_06065 PF14480 DNA polymerase III polC-type N-terminus I CS374_06065 PF14579 Helix-hairpin-helix motif CS374_06065 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CS374_06065 PF02811 PHP domain CS374_06070 PF02768 DNA polymerase III beta subunit, C-terminal domain CS374_06070 PF02767 DNA polymerase III beta subunit, central domain CS374_06070 PF00712 DNA polymerase III beta subunit, N-terminal domain CS374_06075 PF01812 5-formyltetrahydrofolate cyclo-ligase family CS374_06080 PF01471 Putative peptidoglycan binding domain CS374_06080 PF03572 Peptidase family S41 CS374_06080 PF13180 PDZ domain CS374_06095 PF00258 Flavodoxin CS374_06100 PF02595 Glycerate kinase family CS374_06125 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family CS374_06130 PF01209 ubiE/COQ5 methyltransferase family CS374_06135 PF17392 Urocanase C-terminal domain CS374_06135 PF17391 Urocanase N-terminal domain CS374_06135 PF01175 Urocanase Rossmann-like domain CS374_06140 PF02021 Uncharacterised protein family UPF0102 CS374_06155 PF06965 Na+/H+ antiporter 1 CS374_06160 PF09190 DALR domain CS374_06160 PF01406 tRNA synthetases class I (C) catalytic domain CS374_06165 PF01734 Patatin-like phospholipase CS374_06170 PF00535 Glycosyl transferase family 2 CS374_06185 PF13090 Polyphosphate kinase C-terminal domain 2 CS374_06185 PF02503 Polyphosphate kinase middle domain CS374_06185 PF13089 Polyphosphate kinase N-terminal domain CS374_06185 PF17941 Polyphosphate kinase C-terminal domain 1 CS374_06190 PF13167 GTP-binding GTPase N-terminal CS374_06190 PF16360 GTP-binding GTPase Middle Region CS374_06190 PF01926 50S ribosome-binding GTPase CS374_06230 PF00589 Phage integrase family CS374_06230 PF02899 Phage integrase, N-terminal SAM-like domain CS374_06285 PF00485 Phosphoribulokinase / Uridine kinase family CS374_06290 PF00155 Aminotransferase class I and II CS374_06295 PF01661 Macro domain CS374_06300 PF12850 Calcineurin-like phosphoesterase superfamily domain CS374_06305 PF01883 Iron-sulfur cluster assembly protein CS374_06310 PF00226 DnaJ domain CS374_06310 PF01556 DnaJ C terminal domain CS374_06310 PF00684 DnaJ central domain CS374_06315 PF01025 GrpE CS374_06320 PF00270 DEAD/DEAH box helicase CS374_06320 PF00271 Helicase conserved C-terminal domain CS374_06320 PF17757 UvrB interaction domain CS374_06320 PF03461 TRCF domain CS374_06320 PF02559 CarD-like/TRCF domain CS374_06325 PF01569 PAP2 superfamily CS374_06330 PF10576 Iron-sulfur binding domain of endonuclease III CS374_06330 PF00730 HhH-GPD superfamily base excision DNA repair protein CS374_06330 PF00633 Helix-hairpin-helix motif CS374_06335 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain CS374_06335 PF01409 tRNA synthetases class II core domain (F) CS374_06350 PF13335 Magnesium chelatase, subunit ChlI C-terminal CS374_06350 PF01078 Magnesium chelatase, subunit ChlI CS374_06360 PF00551 Formyl transferase CS374_06360 PF02911 Formyl transferase, C-terminal domain CS374_06365 PF00550 Phosphopantetheine attachment site CS374_06370 PF02801 Beta-ketoacyl synthase, C-terminal domain CS374_06370 PF00109 Beta-ketoacyl synthase, N-terminal domain CS374_06375 PF14622 Ribonuclease-III-like CS374_06375 PF00035 Double-stranded RNA binding motif CS374_06380 PF07549 SecD/SecF GG Motif CS374_06380 PF02355 Protein export membrane protein CS374_06390 PF00005 ABC transporter CS374_06405 PF00312 Ribosomal protein S15 CS374_06420 PF00274 Fructose-bisphosphate aldolase class-I CS374_06425 PF00326 Prolyl oligopeptidase family CS374_06425 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region CS374_06430 PF00586 AIR synthase related protein, N-terminal domain CS374_06430 PF02769 AIR synthase related protein, C-terminal domain CS374_06450 PF00456 Transketolase, thiamine diphosphate binding domain CS374_06450 PF02780 Transketolase, C-terminal domain CS374_06450 PF02779 Transketolase, pyrimidine binding domain CS374_06455 PF02502 Ribose/Galactose Isomerase CS374_06465 PF01515 Phosphate acetyl/butaryl transferase CS374_06465 PF00390 Malic enzyme, N-terminal domain CS374_06465 PF03949 Malic enzyme, NAD binding domain CS374_06475 PF12704 MacB-like periplasmic core domain CS374_06475 PF02687 FtsX-like permease family CS374_06480 PF00005 ABC transporter CS374_06485 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CS374_06505 PF03781 Sulfatase-modifying factor enzyme 1 CS374_06525 PF02417 Chromate transporter CS374_06550 PF17782 DprA winged helix domain CS374_06550 PF02481 DNA recombination-mediator protein A CS374_06555 PF02769 AIR synthase related protein, C-terminal domain CS374_06555 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain CS374_06555 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal CS374_06585 PF13187 4Fe-4S dicluster domain CS374_06585 PF04060 Putative Fe-S cluster CS374_06590 PF13375 RnfC Barrel sandwich hybrid domain CS374_06590 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CS374_06590 PF13237 4Fe-4S dicluster domain CS374_06590 PF10531 SLBB domain CS374_06595 PF03116 NQR2, RnfD, RnfE family CS374_06600 PF04205 FMN-binding domain CS374_06605 PF02508 Rnf-Nqr subunit, membrane protein CS374_06610 PF02508 Rnf-Nqr subunit, membrane protein CS374_06615 PF02424 ApbE family CS374_06620 PF00881 Nitroreductase family CS374_06625 PF00535 Glycosyl transferase family 2 CS374_06640 PF00829 Ribosomal prokaryotic L21 protein CS374_06645 PF01016 Ribosomal L27 protein CS374_06650 PF02403 Seryl-tRNA synthetase N-terminal domain CS374_06650 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CS374_06685 PF00221 Aromatic amino acid lyase CS374_06690 PF04961 Formiminotransferase-cyclodeaminase CS374_06705 PF01979 Amidohydrolase family CS374_06710 PF02971 Formiminotransferase domain CS374_06710 PF07837 Formiminotransferase domain, N-terminal subdomain CS374_06725 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CS374_06725 PF07497 Rho termination factor, RNA-binding domain CS374_06735 PF00535 Glycosyl transferase family 2 CS374_06765 PF01053 Cys/Met metabolism PLP-dependent enzyme CS374_06780 PF01926 50S ribosome-binding GTPase CS374_06785 PF16363 GDP-mannose 4,6 dehydratase CS374_06790 PF00270 DEAD/DEAH box helicase CS374_06790 PF00271 Helicase conserved C-terminal domain CS374_06790 PF17191 RecG wedge domain CS374_06810 PF13088 BNR repeat-like domain CS374_06810 PF00754 F5/8 type C domain CS374_06810 PF02973 Sialidase, N-terminal domain CS374_06835 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CS374_06835 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CS374_06840 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain CS374_06840 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain CS374_06845 PF01613 Flavin reductase like domain CS374_06850 PF04011 LemA family CS374_06870 PF17785 PUA-like domain CS374_06870 PF10672 S-adenosylmethionine-dependent methyltransferase CS374_06885 PF00986 DNA gyrase B subunit, carboxyl terminus CS374_06885 PF00204 DNA gyrase B CS374_06885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CS374_06885 PF01751 Toprim domain CS374_06890 PF01467 Cytidylyltransferase-like CS374_06915 PF00572 Ribosomal protein L13 CS374_06920 PF00380 Ribosomal protein S9/S16 CS374_06925 PF00318 Ribosomal protein S2 CS374_06930 PF00889 Elongation factor TS CS374_06935 PF17757 UvrB interaction domain CS374_06935 PF12344 Ultra-violet resistance protein B CS374_06935 PF02151 UvrB/uvrC motif CS374_06935 PF04851 Type III restriction enzyme, res subunit CS374_06935 PF00271 Helicase conserved C-terminal domain CS374_06940 PF03471 Transporter associated domain CS374_06940 PF00999 Sodium/hydrogen exchanger family CS374_06940 PF02080 TrkA-C domain CS374_06950 PF02163 Peptidase family M50 CS374_06950 PF17820 PDZ domain CS374_06955 PF00488 MutS domain V CS374_06955 PF01713 Smr domain CS374_06960 PF01165 Ribosomal protein S21 CS374_06965 PF02899 Phage integrase, N-terminal SAM-like domain CS374_06965 PF00589 Phage integrase family CS374_06980 PF03143 Elongation factor Tu C-terminal domain CS374_06980 PF03144 Elongation factor Tu domain 2 CS374_06980 PF00009 Elongation factor Tu GTP binding domain CS374_06995 PF00467 KOW motif CS374_06995 PF02357 Transcription termination factor nusG CS374_07000 PF03946 Ribosomal protein L11, N-terminal domain CS374_07000 PF00298 Ribosomal protein L11, RNA binding domain CS374_07005 PF00687 Ribosomal protein L1p/L10e family CS374_07010 PF00466 Ribosomal protein L10 CS374_07015 PF16320 Ribosomal protein L7/L12 dimerisation domain CS374_07015 PF00542 Ribosomal protein L7/L12 C-terminal domain CS374_07020 PF04565 RNA polymerase Rpb2, domain 3 CS374_07020 PF10385 RNA polymerase beta subunit external 1 domain CS374_07020 PF04561 RNA polymerase Rpb2, domain 2 CS374_07020 PF04560 RNA polymerase Rpb2, domain 7 CS374_07020 PF04563 RNA polymerase beta subunit CS374_07020 PF00562 RNA polymerase Rpb2, domain 6 CS374_07025 PF04997 RNA polymerase Rpb1, domain 1 CS374_07025 PF00623 RNA polymerase Rpb1, domain 2 CS374_07025 PF04983 RNA polymerase Rpb1, domain 3 CS374_07025 PF05000 RNA polymerase Rpb1, domain 4 CS374_07025 PF04998 RNA polymerase Rpb1, domain 5 CS374_07030 PF13545 Crp-like helix-turn-helix domain CS374_07030 PF00027 Cyclic nucleotide-binding domain CS374_07040 PF13175 AAA ATPase domain CS374_07050 PF04468 PSP1 C-terminal conserved region CS374_07055 PF01966 HD domain CS374_07055 PF12072 Domain of unknown function (DUF3552) CS374_07055 PF00013 KH domain CS374_07085 PF10365 Domain of unknown function (DUF2436) CS374_07085 PF07675 Cleaved Adhesin Domain CS374_07090 PF08676 MutL C terminal dimerisation domain CS374_07090 PF01119 DNA mismatch repair protein, C-terminal domain CS374_07105 PF00639 PPIC-type PPIASE domain CS374_07105 PF09312 SurA N-terminal domain CS374_07110 PF00570 HRDC domain CS374_07110 PF16124 RecQ zinc-binding CS374_07110 PF00270 DEAD/DEAH box helicase CS374_07110 PF09382 RQC domain CS374_07110 PF00271 Helicase conserved C-terminal domain CS374_07115 PF07724 AAA domain (Cdc48 subfamily) CS374_07115 PF06689 ClpX C4-type zinc finger CS374_07115 PF10431 C-terminal, D2-small domain, of ClpB protein CS374_07120 PF00574 Clp protease CS374_07170 PF00484 Carbonic anhydrase CS374_07185 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg CS374_07185 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase CS374_07185 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II CS374_07190 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CS374_07195 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF CS374_07195 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF CS374_07195 PF01189 16S rRNA methyltransferase RsmB/F CS374_07200 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CS374_07215 PF02706 Chain length determinant protein CS374_07215 PF13614 AAA domain CS374_07215 PF13807 G-rich domain on putative tyrosine kinase CS374_07255 PF07687 Peptidase dimerisation domain CS374_07255 PF01546 Peptidase family M20/M25/M40 CS374_07260 PF00899 ThiF family CS374_07265 PF03309 Type III pantothenate kinase CS374_07285 PF00571 CBS domain CS374_07285 PF03471 Transporter associated domain CS374_07285 PF01595 Cyclin M transmembrane N-terminal domain CS374_07310 PF08245 Mur ligase middle domain CS374_07310 PF02875 Mur ligase family, glutamate ligase domain CS374_07315 PF00709 Adenylosuccinate synthetase CS374_07320 PF01475 Ferric uptake regulator family CS374_07330 PF01238 Phosphomannose isomerase type I CS374_07345 PF08331 Domain of unknown function (DUF1730) CS374_07360 PF06969 HemN C-terminal domain CS374_07360 PF04055 Radical SAM superfamily CS374_07370 PF02569 Pantoate-beta-alanine ligase CS374_07380 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CS374_07385 PF00155 Aminotransferase class I and II CS374_07395 PF01121 Dephospho-CoA kinase CS374_07405 PF02699 Preprotein translocase subunit CS374_07410 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CS374_07410 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CS374_07415 PF05491 RuvB C-terminal winged helix domain CS374_07415 PF05496 Holliday junction DNA helicase RuvB P-loop domain CS374_07415 PF17864 RuvB AAA lid domain CS374_07430 PF10459 Peptidase S46 CS374_07455 PF01048 Phosphorylase superfamily CS374_07460 PF02664 S-Ribosylhomocysteinase (LuxS) CS374_07480 PF01668 SmpB protein CS374_07485 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region CS374_07485 PF00326 Prolyl oligopeptidase family CS374_07490 PF04055 Radical SAM superfamily CS374_07495 PF01364 Peptidase family C25 CS374_07495 PF08126 Propeptide_C25 CS374_07495 PF18630 Peptidase M60 C-terminal domain CS374_07495 PF03785 Peptidase family C25, C terminal ig-like domain CS374_07520 PF02130 Uncharacterized protein family UPF0054 CS374_07525 PF07670 Nucleoside recognition CS374_07530 PF00625 Guanylate kinase CS374_07540 PF02810 SEC-C motif CS374_07540 PF07517 SecA DEAD-like domain CS374_07540 PF01043 SecA preprotein cross-linking domain CS374_07540 PF07516 SecA Wing and Scaffold domain CS374_07545 PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase CS374_07555 PF12705 PD-(D/E)XK nuclease superfamily CS374_07570 PF00118 TCP-1/cpn60 chaperonin family CS374_07575 PF00166 Chaperonin 10 Kd subunit CS374_07585 PF00478 IMP dehydrogenase / GMP reductase domain CS374_07585 PF00571 CBS domain CS374_07595 PF06418 CTP synthase N-terminus CS374_07595 PF00117 Glutamine amidotransferase class-I CS374_07600 PF02096 60Kd inner membrane protein CS374_07600 PF14849 YidC periplasmic domain CS374_07605 PF00156 Phosphoribosyl transferase domain CS374_07610 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain CS374_07610 PF00117 Glutamine amidotransferase class-I CS374_07615 PF02142 MGS-like domain CS374_07615 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CS374_07615 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CS374_07620 PF02540 NAD synthase CS374_07625 PF04294 VanW like protein CS374_07670 PF01546 Peptidase family M20/M25/M40 CS374_07670 PF07687 Peptidase dimerisation domain CS374_07675 PF02321 Outer membrane efflux protein CS374_07675 PF08139 Prokaryotic membrane lipoprotein lipid attachment site CS374_07685 PF00873 AcrB/AcrD/AcrF family CS374_07735 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg CS374_07735 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase CS374_07735 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CS374_07735 PF12838 4Fe-4S dicluster domain CS374_07735 PF10371 Domain of unknown function CS374_07735 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II CS374_07770 PF01048 Phosphorylase superfamily CS374_07775 PF01979 Amidohydrolase family CS374_07780 PF01546 Peptidase family M20/M25/M40 CS374_07780 PF07687 Peptidase dimerisation domain CS374_07785 PF06826 Predicted Permease Membrane Region CS374_07785 PF02080 TrkA-C domain CS374_07815 PF01132 Elongation factor P (EF-P) OB domain CS374_07815 PF09285 Elongation factor P, C-terminal CS374_07815 PF08207 Elongation factor P (EF-P) KOW-like domain CS374_07825 PF02774 Semialdehyde dehydrogenase, dimerisation domain CS374_07825 PF01118 Semialdehyde dehydrogenase, NAD binding domain CS374_07830 PF01795 MraW methylase family CS374_07845 PF02875 Mur ligase family, glutamate ligase domain CS374_07845 PF01225 Mur ligase family, catalytic domain CS374_07845 PF08245 Mur ligase middle domain CS374_07850 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 CS374_07850 PF00953 Glycosyl transferase family 4 CS374_07855 PF02875 Mur ligase family, glutamate ligase domain CS374_07855 PF08245 Mur ligase middle domain CS374_07860 PF01098 Cell cycle protein CS374_07865 PF03033 Glycosyltransferase family 28 N-terminal domain CS374_07865 PF04101 Glycosyltransferase family 28 C-terminal domain CS374_07870 PF01225 Mur ligase family, catalytic domain CS374_07870 PF02875 Mur ligase family, glutamate ligase domain CS374_07870 PF08245 Mur ligase middle domain CS374_07885 PF12327 FtsZ family, C-terminal domain CS374_07885 PF00091 Tubulin/FtsZ family, GTPase domain CS374_07905 PF03458 UPF0126 domain CS374_07910 PF02548 Ketopantoate hydroxymethyltransferase CS374_07915 PF00958 GMP synthase C terminal domain CS374_07915 PF02540 NAD synthase CS374_07915 PF00117 Glutamine amidotransferase class-I CS374_07920 PF01197 Ribosomal protein L31 CS374_07925 PF00595 PDZ domain CS374_07930 PF00140 Sigma-70 factor, region 1.2 CS374_07930 PF04545 Sigma-70, region 4 CS374_07930 PF03979 Sigma-70 factor, region 1.1 CS374_07930 PF04539 Sigma-70 region 3 CS374_07930 PF04542 Sigma-70 region 2 CS374_07935 PF01250 Ribosomal protein S6 CS374_07940 PF01084 Ribosomal protein S18 CS374_07945 PF01281 Ribosomal protein L9, N-terminal domain CS374_07945 PF03948 Ribosomal protein L9, C-terminal domain CS374_07955 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CS374_07955 PF00925 GTP cyclohydrolase II CS374_07970 PF02224 Cytidylate kinase CS374_07975 PF02401 LytB protein CS374_08025 PF00578 AhpC/TSA family CS374_08025 PF10417 C-terminal domain of 1-Cys peroxiredoxin CS374_08030 PF07992 Pyridine nucleotide-disulphide oxidoreductase CS374_08030 PF13192 Thioredoxin domain CS374_08035 PF02190 ATP-dependent protease La (LON) substrate-binding domain CS374_08035 PF05362 Lon protease (S16) C-terminal proteolytic domain CS374_08035 PF00004 ATPase family associated with various cellular activities (AAA) CS374_08050 PF00121 Triosephosphate isomerase CS374_08060 PF01227 GTP cyclohydrolase I CS374_08075 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) CS374_08080 PF00005 ABC transporter CS374_08085 PF01513 ATP-NAD kinase CS374_08090 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ CS374_08095 PF01618 MotA/TolQ/ExbB proton channel family CS374_08110 PF01965 DJ-1/PfpI family CS374_08120 PF01554 MatE CS374_08125 PF00586 AIR synthase related protein, N-terminal domain CS374_08125 PF02769 AIR synthase related protein, C-terminal domain CS374_08130 PF02606 Tetraacyldisaccharide-1-P 4'-kinase CS374_08135 PF01343 Peptidase family S49 CS374_08145 PF07715 TonB-dependent Receptor Plug Domain CS374_08145 PF00593 TonB dependent receptor CS374_08155 PF00005 ABC transporter CS374_08160 PF01032 FecCD transport family CS374_08205 PF00468 Ribosomal protein L34 CS374_08210 PF02545 Maf-like protein CS374_08235 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CS374_08240 PF02837 Glycosyl hydrolases family 2, sugar binding domain CS374_08240 PF02836 Glycosyl hydrolases family 2, TIM barrel domain CS374_08240 PF02929 Beta galactosidase small chain CS374_08240 PF16353 Domain of unknown function(DUF4981) CS374_08240 PF00703 Glycosyl hydrolases family 2 CS374_08245 PF01636 Phosphotransferase enzyme family CS374_08250 PF07715 TonB-dependent Receptor Plug Domain CS374_08250 PF00593 TonB dependent receptor CS374_08255 PF06180 Cobalt chelatase (CbiK) CS374_08265 PF01032 FecCD transport family CS374_08270 PF00005 ABC transporter CS374_08290 PF00106 short chain dehydrogenase CS374_08295 PF16653 Saccharopine dehydrogenase C-terminal domain CS374_08295 PF03435 Saccharopine dehydrogenase NADP binding domain CS374_08330 PF00005 ABC transporter CS374_08340 PF00171 Aldehyde dehydrogenase family CS374_08345 PF00465 Iron-containing alcohol dehydrogenase CS374_08350 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain CS374_08350 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain CS374_08360 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal CS374_08360 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal CS374_08365 PF00691 OmpA family CS374_08370 PF00691 OmpA family CS374_08380 PF11897 Protein of unknown function (DUF3417) CS374_08380 PF00343 Carbohydrate phosphorylase CS374_08390 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase CS374_08395 PF02277 Phosphoribosyltransferase CS374_08400 PF02654 Cobalamin-5-phosphate synthase CS374_08410 PF01177 Asp/Glu/Hydantoin racemase CS374_08420 PF07715 TonB-dependent Receptor Plug Domain CS374_08420 PF00593 TonB dependent receptor CS374_08430 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase CS374_08430 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CS374_08435 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CS374_08435 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase CS374_08445 PF00117 Glutamine amidotransferase class-I CS374_08470 PF03932 CutC family CS374_08495 PF00512 His Kinase A (phospho-acceptor) domain CS374_08495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CS374_08495 PF18719 ArlS sensor domain CS374_08515 PF00877 NlpC/P60 family CS374_08520 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region CS374_08520 PF07676 WD40-like Beta Propeller Repeat CS374_08520 PF00326 Prolyl oligopeptidase family CS374_08525 PF13419 Haloacid dehalogenase-like hydrolase CS374_08545 PF01820 D-ala D-ala ligase N-terminus CS374_08545 PF07478 D-ala D-ala ligase C-terminus CS374_08550 PF00849 RNA pseudouridylate synthase CS374_08550 PF01479 S4 domain CS374_08565 PF00677 Lumazine binding domain CS374_08575 PF00266 Aminotransferase class-V CS374_08580 PF01351 Ribonuclease HII CS374_08590 PF14437 MafB19-like deaminase CS374_08595 PF12706 Beta-lactamase superfamily domain CS374_08595 PF00753 Metallo-beta-lactamase superfamily CS374_08605 PF08032 RNA 2'-O ribose methyltransferase substrate binding CS374_08605 PF00588 SpoU rRNA Methylase family CS374_08615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CS374_08615 PF00512 His Kinase A (phospho-acceptor) domain CS374_08615 PF00989 PAS fold CS374_08620 PF00158 Sigma-54 interaction domain CS374_08620 PF02954 Bacterial regulatory protein, Fis family CS374_08620 PF00072 Response regulator receiver domain CS374_08630 PF00535 Glycosyl transferase family 2 CS374_08645 PF12392 Collagenase CS374_08645 PF01136 Peptidase family U32 CS374_08655 PF01751 Toprim domain CS374_08655 PF13368 Topoisomerase C-terminal repeat CS374_08655 PF01131 DNA topoisomerase CS374_08660 PF01416 tRNA pseudouridine synthase CS374_08675 PF01432 Peptidase family M3 CS374_08695 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CS374_08695 PF05697 Bacterial trigger factor protein (TF) CS374_08695 PF05698 Bacterial trigger factor protein (TF) C-terminus CS374_08700 PF01138 3' exoribonuclease family, domain 1 CS374_08700 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain CS374_08700 PF03725 3' exoribonuclease family, domain 2 CS374_08700 PF00575 S1 RNA binding domain CS374_08700 PF00013 KH domain CS374_08705 PF02446 4-alpha-glucanotransferase CS374_08730 PF01434 Peptidase family M41 CS374_08730 PF00004 ATPase family associated with various cellular activities (AAA) CS374_08730 PF17862 AAA+ lid domain CS374_08745 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CS374_08745 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CS374_08745 PF02770 Acyl-CoA dehydrogenase, middle domain CS374_08750 PF00766 Electron transfer flavoprotein FAD-binding domain CS374_08750 PF01012 Electron transfer flavoprotein domain CS374_08755 PF01012 Electron transfer flavoprotein domain CS374_08760 PF00814 Glycoprotease family CS374_08780 PF01618 MotA/TolQ/ExbB proton channel family CS374_08790 PF01026 TatD related DNase CS374_08820 PF01926 50S ribosome-binding GTPase CS374_08820 PF01018 GTP1/OBG CS374_08835 PF06874 Firmicute fructose-1,6-bisphosphatase CS374_08840 PF00905 Penicillin binding protein transpeptidase domain CS374_08840 PF00912 Transglycosylase CS374_08840 PF17092 Penicillin-binding protein OB-like domain CS374_08845 PF01027 Inhibitor of apoptosis-promoting Bax1 CS374_08850 PF08264 Anticodon-binding domain of tRNA CS374_08850 PF13603 Leucyl-tRNA synthetase, Domain 2 CS374_08850 PF09334 tRNA synthetases class I (M) CS374_08870 PF01966 HD domain CS374_08870 PF01743 Poly A polymerase head domain CS374_08870 PF12627 Probable RNA and SrmB- binding site of polymerase A CS374_08880 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CS374_08880 PF07992 Pyridine nucleotide-disulphide oxidoreductase CS374_08885 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase CS374_08890 PF00753 Metallo-beta-lactamase superfamily CS374_08890 PF00258 Flavodoxin CS374_08895 PF01790 Prolipoprotein diacylglyceryl transferase CS374_08900 PF01118 Semialdehyde dehydrogenase, NAD binding domain CS374_08900 PF16654 Diaminopimelic acid dehydrogenase C-terminal domain CS374_08905 PF01029 NusB family CS374_08925 PF01330 RuvA N terminal domain CS374_08925 PF07499 RuvA, C-terminal domain CS374_08955 PF02899 Phage integrase, N-terminal SAM-like domain CS374_08955 PF00589 Phage integrase family CS374_08960 PF02899 Phage integrase, N-terminal SAM-like domain CS374_08960 PF00589 Phage integrase family CS374_08965 PF02899 Phage integrase, N-terminal SAM-like domain CS374_08965 PF00589 Phage integrase family CS374_08980 PF00144 Beta-lactamase CS374_08990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CS374_08990 PF00672 HAMP domain CS374_08990 PF06580 Histidine kinase CS374_08990 PF02743 Cache domain CS374_08995 PF04397 LytTr DNA-binding domain CS374_08995 PF00072 Response regulator receiver domain CS374_09065 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CS374_09075 PF01627 Hpt domain CS374_09075 PF00072 Response regulator receiver domain CS374_09075 PF00672 HAMP domain CS374_09075 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CS374_09075 PF00512 His Kinase A (phospho-acceptor) domain CS374_09075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CS374_09080 PF00196 Bacterial regulatory proteins, luxR family CS374_09080 PF00072 Response regulator receiver domain CS374_09090 PF00885 6,7-dimethyl-8-ribityllumazine synthase CS374_09095 PF13734 Spi protease inhibitor CS374_09095 PF01640 Peptidase C10 family CS374_09110 PF04371 Porphyromonas-type peptidyl-arginine deiminase CS374_09120 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family CS374_09125 PF00037 4Fe-4S binding domain CS374_09130 PF12169 DNA polymerase III subunits gamma and tau domain III CS374_09135 PF05683 Fumarase C-terminus CS374_09135 PF05681 Fumarate hydratase (Fumerase) CS374_09145 PF03060 Nitronate monooxygenase CS374_09160 PF06826 Predicted Permease Membrane Region CS374_09160 PF02080 TrkA-C domain CS374_09170 PF01545 Cation efflux family CS374_09205 PF01212 Beta-eliminating lyase CS374_09235 PF01808 AICARFT/IMPCHase bienzyme CS374_09235 PF02142 MGS-like domain CS374_09255 PF03717 Penicillin-binding Protein dimerisation domain CS374_09255 PF00905 Penicillin binding protein transpeptidase domain CS374_09260 PF01098 Cell cycle protein CS374_09285 PF00521 DNA gyrase/topoisomerase IV, subunit A CS374_09285 PF03989 DNA gyrase C-terminal domain, beta-propeller CS374_09295 PF01810 LysE type translocator CS374_09310 PF00005 ABC transporter CS374_09315 PF00005 ABC transporter CS374_09320 PF00633 Helix-hairpin-helix motif CS374_09320 PF00730 HhH-GPD superfamily base excision DNA repair protein CS374_09320 PF14815 NUDIX domain CS374_09330 PF00528 Binding-protein-dependent transport system inner membrane component CS374_09335 PF00005 ABC transporter CS374_09370 PF01048 Phosphorylase superfamily CS374_09375 PF01336 OB-fold nucleic acid binding domain CS374_09375 PF00152 tRNA synthetases class II (D, K and N) CS374_09380 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus CS374_09380 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus CS374_09385 PF00342 Phosphoglucose isomerase CS374_09395 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CS374_09400 PF01782 RimM N-terminal domain CS374_09405 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain CS374_09405 PF13288 DXP reductoisomerase C-terminal domain CS374_09405 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase CS374_09415 PF01170 Putative RNA methylase family UPF0020 CS374_09415 PF02926 THUMP domain CS374_09420 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region CS374_09420 PF00326 Prolyl oligopeptidase family CS374_09425 PF02844 Phosphoribosylglycinamide synthetase, N domain CS374_09425 PF02843 Phosphoribosylglycinamide synthetase, C domain CS374_09425 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CS374_09435 PF13302 Acetyltransferase (GNAT) domain CS374_09455 PF00795 Carbon-nitrogen hydrolase CS374_09460 PF00156 Phosphoribosyl transferase domain CS374_09475 PF00781 Diacylglycerol kinase catalytic domain CS374_09480 PF14489 QueF-like protein CS374_09485 PF00534 Glycosyl transferases group 1 CS374_09485 PF13439 Glycosyltransferase Family 4 CS374_09500 PF03099 Biotin/lipoate A/B protein ligase family CS374_09500 PF12706 Beta-lactamase superfamily domain CS374_09505 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain CS374_09505 PF01565 FAD binding domain CS374_09515 PF02652 L-lactate permease CS374_09520 PF00817 impB/mucB/samB family CS374_09520 PF11798 IMS family HHH motif CS374_09520 PF11799 impB/mucB/samB family C-terminal domain CS374_09520 PF13438 Domain of unknown function (DUF4113) CS374_09525 PF00717 Peptidase S24-like CS374_09540 PF01145 SPFH domain / Band 7 family CS374_09550 PF02233 NAD(P) transhydrogenase beta subunit CS374_09555 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CS374_09555 PF05222 Alanine dehydrogenase/PNT, N-terminal domain CS374_09555 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch CS374_09560 PF05222 Alanine dehydrogenase/PNT, N-terminal domain CS374_09560 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CS374_09565 PF01741 Large-conductance mechanosensitive channel, MscL CS374_09575 PF13607 Succinyl-CoA ligase like flavodoxin domain CS374_09575 PF13380 CoA binding domain CS374_09575 PF00583 Acetyltransferase (GNAT) family CS374_09580 PF00155 Aminotransferase class I and II CS374_09585 PF10365 Domain of unknown function (DUF2436) CS374_09585 PF07675 Cleaved Adhesin Domain CS374_09585 PF07675 Cleaved Adhesin Domain CS374_09585 PF10365 Domain of unknown function (DUF2436) CS374_09585 PF01364 Peptidase family C25 CS374_09585 PF03785 Peptidase family C25, C terminal ig-like domain CS374_09585 PF08126 Propeptide_C25 CS374_09585 PF01364 Peptidase family C25 CS374_09585 PF03785 Peptidase family C25, C terminal ig-like domain CS374_09585 PF08126 Propeptide_C25 CS374_09595 PF02075 Crossover junction endodeoxyribonuclease RuvC CS374_09600 PF02562 PhoH-like protein CS374_09600 PF13638 PIN domain CS374_09605 PF01268 Formate--tetrahydrofolate ligase CS374_09625 PF08281 Sigma-70, region 4 CS374_09625 PF04542 Sigma-70 region 2 CS374_09640 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CS374_09645 PF01264 Chorismate synthase CS374_09655 PF03577 Peptidase family C69 CS374_09675 PF06508 Queuosine biosynthesis protein QueC CS374_09685 PF02527 rRNA small subunit methyltransferase G CS374_09690 PF00753 Metallo-beta-lactamase superfamily CS374_09695 PF02347 Glycine cleavage system P-protein CS374_09725 PF00575 S1 RNA binding domain CS374_09740 PF07670 Nucleoside recognition CS374_09740 PF02421 Ferrous iron transport protein B CS374_09740 PF17910 FeoB cytosolic helical domain CS374_09740 PF04023 FeoA domain CS374_09740 PF07664 Ferrous iron transport protein B C terminus CS374_09755 PF01063 Amino-transferase class IV CS374_09760 PF01370 NAD dependent epimerase/dehydratase family CS374_09765 PF16363 GDP-mannose 4,6 dehydratase CS374_09770 PF00210 Ferritin-like domain CS374_09775 PF02585 GlcNAc-PI de-N-acetylase CS374_09775 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase CS374_09780 PF10459 Peptidase S46 CS374_09790 PF01713 Smr domain CS374_09790 PF00488 MutS domain V CS374_09800 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CS374_09800 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CS374_09800 PF01842 ACT domain CS374_09805 PF00266 Aminotransferase class-V CS374_09810 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CS374_09810 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CS374_09810 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CS374_09825 PF01132 Elongation factor P (EF-P) OB domain CS374_09825 PF08207 Elongation factor P (EF-P) KOW-like domain CS374_09825 PF09285 Elongation factor P, C-terminal CS374_09835 PF00202 Aminotransferase class-III CS374_09845 PF00171 Aldehyde dehydrogenase family CS374_09890 PF01609 Transposase DDE domain CS374_09895 PF03477 ATP cone domain CS374_09895 PF13597 Anaerobic ribonucleoside-triphosphate reductase CS374_09905 PF00216 Bacterial DNA-binding protein CS374_09910 PF00575 S1 RNA binding domain CS374_09910 PF10150 Ribonuclease E/G family CS374_09915 PF02132 RecR protein CS374_09915 PF13662 Toprim domain CS374_09925 PF01653 NAD-dependent DNA ligase adenylation domain CS374_09925 PF00533 BRCA1 C Terminus (BRCT) domain CS374_09925 PF12826 Helix-hairpin-helix motif CS374_09925 PF03120 NAD-dependent DNA ligase OB-fold domain CS374_09925 PF03119 NAD-dependent DNA ligase C4 zinc finger domain CS374_09930 PF12704 MacB-like periplasmic core domain CS374_09930 PF02687 FtsX-like permease family CS374_09945 PF01553 Acyltransferase CS374_09960 PF01761 3-dehydroquinate synthase CS374_09965 PF02272 DHHA1 domain CS374_09965 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CS374_09965 PF01411 tRNA synthetases class II (A) CS374_09975 PF03796 DnaB-like helicase C terminal domain CS374_09975 PF00772 DnaB-like helicase N terminal domain CS374_09980 PF00009 Elongation factor Tu GTP binding domain CS374_09980 PF00679 Elongation factor G C-terminus CS374_09980 PF03144 Elongation factor Tu domain 2 CS374_09980 PF06421 GTP-binding protein LepA C-terminus CS374_09990 PF00440 Bacterial regulatory proteins, tetR family CS374_09990 PF08361 MAATS-type transcriptional repressor, C-terminal region CS374_10000 PF00849 RNA pseudouridylate synthase CS374_10005 PF00196 Bacterial regulatory proteins, luxR family CS374_10005 PF00072 Response regulator receiver domain CS374_10015 PF01370 NAD dependent epimerase/dehydratase family CS374_10020 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CS374_10020 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CS374_10035 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CS374_10040 PF16326 ABC transporter C-terminal domain CS374_10040 PF00005 ABC transporter CS374_10040 PF12848 ABC transporter CS374_10045 PF01464 Transglycosylase SLT domain CS374_10045 PF00497 Bacterial extracellular solute-binding proteins, family 3 CS374_10055 PF00106 short chain dehydrogenase CS374_10060 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CS374_10060 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CS374_10090 PF01693 Caulimovirus viroplasmin CS374_10100 PF00132 Bacterial transferase hexapeptide (six repeats) CS374_10105 PF01321 Creatinase/Prolidase N-terminal domain CS374_10105 PF00557 Metallopeptidase family M24 CS374_10120 PF00012 Hsp70 protein CS374_10130 PF00589 Phage integrase family CS374_10130 PF02899 Phage integrase, N-terminal SAM-like domain CS374_10175 PF02661 Fic/DOC family CS374_10185 PF00589 Phage integrase family CS374_10185 PF14659 Phage integrase, N-terminal SAM-like domain CS374_10225 PF01131 DNA topoisomerase CS374_10225 PF01751 Toprim domain CS374_10235 PF00155 Aminotransferase class I and II CS374_10245 PF06463 Molybdenum Cofactor Synthesis C CS374_10245 PF04055 Radical SAM superfamily CS374_10255 PF00005 ABC transporter CS374_10255 PF00664 ABC transporter transmembrane region CS374_10255 PF03412 Peptidase C39 family CS374_10380 PF01807 CHC2 zinc finger CS374_10380 PF08275 DNA primase catalytic core, N-terminal domain CS374_10480 PF00155 Aminotransferase class I and II CS374_10490 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CS374_10490 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CS374_10515 PF03062 MBOAT, membrane-bound O-acyltransferase family CS374_10540 PF00005 ABC transporter CS374_10540 PF04954 Siderophore-interacting protein CS374_10540 PF00664 ABC transporter transmembrane region CS374_10540 PF08021 Siderophore-interacting FAD-binding domain CS374_10545 PF00005 ABC transporter CS374_10545 PF00664 ABC transporter transmembrane region CS374_10570 PF03572 Peptidase family S41 CS374_10570 PF13180 PDZ domain CS374_10575 PF13808 DDE_Tnp_1-associated CS374_10575 PF01609 Transposase DDE domain CS374_10585 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B CS374_10590 PF01180 Dihydroorotate dehydrogenase CS374_10595 PF01144 Coenzyme A transferase CS374_10600 PF03061 Thioesterase superfamily CS374_10605 PF05853 beta-keto acid cleavage enzyme CS374_10615 PF04055 Radical SAM superfamily CS374_10615 PF12544 Lysine-2,3-aminomutase CS374_10625 PF00488 MutS domain V CS374_10625 PF05190 MutS family domain IV CS374_10625 PF05192 MutS domain III CS374_10625 PF05188 MutS domain II CS374_10625 PF01624 MutS domain I CS374_10630 PF09043 D-Lysine 5,6-aminomutase TIM-barrel domain of alpha subunit CS374_10635 PF16554 Dimerisation domain of d-ornithine 4,5-aminomutase CS374_10635 PF02310 B12 binding domain CS374_10640 PF01144 Coenzyme A transferase CS374_10645 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CS374_10645 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CS374_10645 PF02770 Acyl-CoA dehydrogenase, middle domain CS374_10650 PF01012 Electron transfer flavoprotein domain CS374_10655 PF00766 Electron transfer flavoprotein FAD-binding domain CS374_10655 PF01012 Electron transfer flavoprotein domain CS374_10660 PF00378 Enoyl-CoA hydratase/isomerase CS374_10665 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CS374_10665 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CS374_10670 PF00871 Acetokinase family CS374_10675 PF01515 Phosphate acetyl/butaryl transferase CS374_10685 PF00578 AhpC/TSA family CS374_10695 PF04055 Radical SAM superfamily CS374_10695 PF16199 Radical_SAM C-terminal domain CS374_10705 PF00072 Response regulator receiver domain CS374_10705 PF00486 Transcriptional regulatory protein, C terminal CS374_10725 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CS374_10725 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CS374_10725 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CS374_10725 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CS374_10730 PF01938 TRAM domain CS374_10730 PF05958 tRNA (Uracil-5-)-methyltransferase CS374_10745 PF01168 Alanine racemase, N-terminal domain CS374_10745 PF00842 Alanine racemase, C-terminal domain CS374_10765 PF01380 SIS domain CS374_10775 PF00474 Sodium:solute symporter family CS374_10785 PF16193 AAA C-terminal domain CS374_10785 PF00004 ATPase family associated with various cellular activities (AAA) CS374_10785 PF12002 MgsA AAA+ ATPase C terminal CS374_10790 PF05175 Methyltransferase small domain CS374_10795 PF04552 Sigma-54, DNA binding domain CS374_10795 PF04963 Sigma-54 factor, core binding domain CS374_10795 PF00309 Sigma-54 factor, Activator interacting domain (AID) CS374_10800 PF08245 Mur ligase middle domain CS374_10800 PF02875 Mur ligase family, glutamate ligase domain CS374_10800 PF01225 Mur ligase family, catalytic domain CS374_10805 PF02261 Aspartate decarboxylase CS374_10810 PF02881 SRP54-type protein, helical bundle domain CS374_10810 PF02978 Signal peptide binding domain CS374_10810 PF00448 SRP54-type protein, GTPase domain CS374_10815 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CS374_10815 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CS374_10820 PF01554 MatE CS374_10830 PF17871 AAA lid domain CS374_10830 PF07724 AAA domain (Cdc48 subfamily) CS374_10830 PF10431 C-terminal, D2-small domain, of ClpB protein CS374_10830 PF00004 ATPase family associated with various cellular activities (AAA) CS374_10830 PF02861 Clp amino terminal domain, pathogenicity island component CS374_10840 PF00152 tRNA synthetases class II (D, K and N) CS374_10840 PF01336 OB-fold nucleic acid binding domain CS374_10845 PF01479 S4 domain CS374_10845 PF00849 RNA pseudouridylate synthase CS374_10850 PF08328 Adenylosuccinate lyase C-terminal CS374_10850 PF00206 Lyase CS374_10855 PF01923 Cobalamin adenosyltransferase CS374_10865 PF00860 Permease family CS374_10870 PF13404 AsnC-type helix-turn-helix domain CS374_10870 PF01037 Lrp/AsnC ligand binding domain CS374_10875 PF02601 Exonuclease VII, large subunit CS374_10875 PF13742 OB-fold nucleic acid binding domain CS374_10880 PF00317 Ribonucleotide reductase, all-alpha domain CS374_10880 PF03477 ATP cone domain CS374_10880 PF02867 Ribonucleotide reductase, barrel domain