locus-tag class description GO498_00005 PF11638 DnaA N-terminal domain GO498_00005 PF08299 Bacterial dnaA protein helix-turn-helix GO498_00005 PF00308 Bacterial dnaA protein GO498_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain GO498_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain GO498_00010 PF02767 DNA polymerase III beta subunit, central domain GO498_00015 PF02463 RecF/RecN/SMC N terminal domain GO498_00020 PF01751 Toprim domain GO498_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GO498_00020 PF18053 DNA gyrase B subunit insert domain GO498_00020 PF00204 DNA gyrase B GO498_00020 PF00986 DNA gyrase B subunit, carboxyl terminus GO498_00025 PF01118 Semialdehyde dehydrogenase, NAD binding domain GO498_00025 PF02774 Semialdehyde dehydrogenase, dimerisation domain GO498_00030 PF13649 Methyltransferase domain GO498_00035 PF13580 SIS domain GO498_00055 PF08340 Domain of unknown function (DUF1732) GO498_00055 PF03755 YicC-like family, N-terminal region GO498_00060 PF03725 3' exoribonuclease family, domain 2 GO498_00060 PF01138 3' exoribonuclease family, domain 1 GO498_00065 PF00156 Phosphoribosyl transferase domain GO498_00070 PF00440 Bacterial regulatory proteins, tetR family GO498_00075 PF00692 dUTPase GO498_00080 PF04127 DNA / pantothenate metabolism flavoprotein GO498_00080 PF02441 Flavoprotein GO498_00085 PF04002 RadC-like JAB domain GO498_00090 PF00830 Ribosomal L28 family GO498_00095 PF00471 Ribosomal protein L33 GO498_00100 PF00534 Glycosyl transferases group 1 GO498_00110 PF13439 Glycosyltransferase Family 4 GO498_00110 PF00534 Glycosyl transferases group 1 GO498_00120 PF04932 O-Antigen ligase GO498_00125 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain GO498_00125 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain GO498_00125 PF06827 Zinc finger found in FPG and IleRS GO498_00130 PF01467 Cytidylyltransferase-like GO498_00135 PF00535 Glycosyl transferase family 2 GO498_00140 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) GO498_00145 PF01075 Glycosyltransferase family 9 (heptosyltransferase) GO498_00150 PF13439 Glycosyltransferase Family 4 GO498_00150 PF00534 Glycosyl transferases group 1 GO498_00155 PF13439 Glycosyltransferase Family 4 GO498_00155 PF00534 Glycosyl transferases group 1 GO498_00165 PF01075 Glycosyltransferase family 9 (heptosyltransferase) GO498_00170 PF01501 Glycosyl transferase family 8 GO498_00170 PF00535 Glycosyl transferase family 2 GO498_00175 PF01075 Glycosyltransferase family 9 (heptosyltransferase) GO498_00180 PF01075 Glycosyltransferase family 9 (heptosyltransferase) GO498_00185 PF01370 NAD dependent epimerase/dehydratase family GO498_00190 PF00155 Aminotransferase class I and II GO498_00195 PF00107 Zinc-binding dehydrogenase GO498_00195 PF08240 Alcohol dehydrogenase GroES-like domain GO498_00200 PF04748 Divergent polysaccharide deacetylase GO498_00205 PF01551 Peptidase family M23 GO498_00210 PF18693 TRAM domain GO498_00210 PF04055 Radical SAM superfamily GO498_00210 PF00919 Uncharacterized protein family UPF0004 GO498_00220 PF00581 Rhodanese-like domain GO498_00225 PF02556 Preprotein translocase subunit SecB GO498_00230 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus GO498_00230 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus GO498_00235 PF06426 Serine acetyltransferase, N-terminal GO498_00235 PF00132 Bacterial transferase hexapeptide (six repeats) GO498_00240 PF00132 Bacterial transferase hexapeptide (six repeats) GO498_00240 PF06426 Serine acetyltransferase, N-terminal GO498_00245 PF00535 Glycosyl transferase family 2 GO498_00250 PF00588 SpoU rRNA Methylase family GO498_00255 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain GO498_00255 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain GO498_00255 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain GO498_00270 PF00535 Glycosyl transferase family 2 GO498_00280 PF12464 Maltose acetyltransferase GO498_00280 PF00132 Bacterial transferase hexapeptide (six repeats) GO498_00280 PF14602 Hexapeptide repeat of succinyl-transferase GO498_00285 PF14667 Polysaccharide biosynthesis C-terminal domain GO498_00290 PF00535 Glycosyl transferase family 2 GO498_00295 PF00672 HAMP domain GO498_00295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GO498_00295 PF00512 His Kinase A (phospho-acceptor) domain GO498_00295 PF16527 Two-component sensor protein CpxA, periplasmic domain GO498_00300 PF00072 Response regulator receiver domain GO498_00300 PF00486 Transcriptional regulatory protein, C terminal GO498_00305 PF07813 LTXXQ motif family protein GO498_00310 PF00589 Phage integrase family GO498_00310 PF02899 Phage integrase, N-terminal SAM-like domain GO498_00355 PF02086 D12 class N6 adenine-specific DNA methyltransferase GO498_00365 PF05840 Bacteriophage replication gene A protein (GPA) GO498_00465 PF02413 Caudovirales tail fibre assembly protein, lambda gpK GO498_00505 PF04606 Ogr/Delta-like zinc finger GO498_00520 PF00884 Sulfatase GO498_00530 PF00365 Phosphofructokinase GO498_00540 PF00121 Triosephosphate isomerase GO498_00545 PF07305 Protein of unknown function (DUF1454) GO498_00550 PF05656 Protein of unknown function (DUF805) GO498_00555 PF00970 Oxidoreductase FAD-binding domain GO498_00555 PF00175 Oxidoreductase NAD-binding domain GO498_00560 PF07690 Major Facilitator Superfamily GO498_00565 PF02782 FGGY family of carbohydrate kinases, C-terminal domain GO498_00565 PF00370 FGGY family of carbohydrate kinases, N-terminal domain GO498_00570 PF00230 Major intrinsic protein GO498_00575 PF06005 Cell division protein ZapB GO498_00580 PF03737 Aldolase/RraA GO498_00585 PF01040 UbiA prenyltransferase family GO498_00590 PF10431 C-terminal, D2-small domain, of ClpB protein GO498_00590 PF07724 AAA domain (Cdc48 subfamily) GO498_00590 PF00004 ATPase family associated with various cellular activities (AAA) GO498_00595 PF00227 Proteasome subunit GO498_00600 PF05036 Sporulation related domain GO498_00605 PF00356 Bacterial regulatory proteins, lacI family GO498_00610 PF17764 3′ DNA-binding domain (3′BD) GO498_00610 PF00271 Helicase conserved C-terminal domain GO498_00610 PF18074 Primosomal protein N C-terminal domain GO498_00610 PF00270 DEAD/DEAH box helicase GO498_00610 PF18319 PriA DNA helicase Cys-rich region (CRR) domain GO498_00615 PF01197 Ribosomal protein L31 GO498_00620 PF07804 HipA-like C-terminal domain GO498_00625 PF01340 Met Apo-repressor, MetJ GO498_00630 PF01053 Cys/Met metabolism PLP-dependent enzyme GO498_00635 PF03447 Homoserine dehydrogenase, NAD binding domain GO498_00635 PF00696 Amino acid kinase family GO498_00635 PF00742 Homoserine dehydrogenase GO498_00640 PF03350 Uncharacterized protein family, UPF0114 GO498_00650 PF00311 Phosphoenolpyruvate carboxylase GO498_00655 PF00535 Glycosyl transferase family 2 GO498_00660 PF00875 DNA photolyase GO498_00660 PF03441 FAD binding domain of DNA photolyase GO498_00665 PF08946 Osmosensory transporter coiled coil GO498_00665 PF00083 Sugar (and other) transporter GO498_00670 PF03466 LysR substrate binding domain GO498_00670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GO498_00675 PF01546 Peptidase family M20/M25/M40 GO498_00675 PF07687 Peptidase dimerisation domain GO498_00690 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain GO498_00690 PF00205 Thiamine pyrophosphate enzyme, central domain GO498_00690 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain GO498_00695 PF07687 Peptidase dimerisation domain GO498_00695 PF01546 Peptidase family M20/M25/M40 GO498_00700 PF01118 Semialdehyde dehydrogenase, NAD binding domain GO498_00700 PF02774 Semialdehyde dehydrogenase, dimerisation domain GO498_00705 PF00696 Amino acid kinase family GO498_00710 PF00764 Arginosuccinate synthase GO498_00715 PF14698 Argininosuccinate lyase C-terminal GO498_00715 PF00206 Lyase GO498_00720 PF03466 LysR substrate binding domain GO498_00720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GO498_00725 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO498_00725 PF07992 Pyridine nucleotide-disulphide oxidoreductase GO498_00730 PF00440 Bacterial regulatory proteins, tetR family GO498_00735 PF07226 Protein of unknown function (DUF1422) GO498_00740 PF05958 tRNA (Uracil-5-)-methyltransferase GO498_00745 PF07715 TonB-dependent Receptor Plug Domain GO498_00745 PF00593 TonB dependent receptor GO498_00750 PF01177 Asp/Glu/Hydantoin racemase GO498_00785 PF01565 FAD binding domain GO498_00785 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain GO498_00790 PF03099 Biotin/lipoate A/B protein ligase family GO498_00790 PF02237 Biotin protein ligase C terminal domain GO498_00790 PF08279 HTH domain GO498_00795 PF00485 Phosphoribulokinase / Uridine kinase family GO498_00825 PF03143 Elongation factor Tu C-terminal domain GO498_00825 PF03144 Elongation factor Tu domain 2 GO498_00825 PF00009 Elongation factor Tu GTP binding domain GO498_00830 PF04324 BFD-like [2Fe-2S] binding domain GO498_00835 PF00210 Ferritin-like domain GO498_00840 PF00338 Ribosomal protein S10p/S20e GO498_00845 PF00297 Ribosomal protein L3 GO498_00850 PF00573 Ribosomal protein L4/L1 family GO498_00855 PF00276 Ribosomal protein L23 GO498_00860 PF00181 Ribosomal Proteins L2, RNA binding domain GO498_00860 PF03947 Ribosomal Proteins L2, C-terminal domain GO498_00865 PF00203 Ribosomal protein S19 GO498_00870 PF00237 Ribosomal protein L22p/L17e GO498_00875 PF00189 Ribosomal protein S3, C-terminal domain GO498_00875 PF07650 KH domain GO498_00880 PF00252 Ribosomal protein L16p/L10e GO498_00885 PF00831 Ribosomal L29 protein GO498_00890 PF00366 Ribosomal protein S17 GO498_00895 PF00238 Ribosomal protein L14p/L23e GO498_00900 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 GO498_00905 PF00673 ribosomal L5P family C-terminus GO498_00905 PF00281 Ribosomal protein L5 GO498_00910 PF00253 Ribosomal protein S14p/S29e GO498_00915 PF00410 Ribosomal protein S8 GO498_00920 PF00347 Ribosomal protein L6 GO498_00925 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast GO498_00930 PF00333 Ribosomal protein S5, N-terminal domain GO498_00930 PF03719 Ribosomal protein S5, C-terminal domain GO498_00935 PF00327 Ribosomal protein L30p/L7e GO498_00940 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A GO498_00945 PF00344 SecY translocase GO498_00950 PF00444 Ribosomal protein L36 GO498_00955 PF00416 Ribosomal protein S13/S18 GO498_00960 PF00411 Ribosomal protein S11 GO498_00965 PF00163 Ribosomal protein S4/S9 N-terminal domain GO498_00965 PF01479 S4 domain GO498_00970 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain GO498_00970 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain GO498_00970 PF01000 RNA polymerase Rpb3/RpoA insert domain GO498_00975 PF01196 Ribosomal protein L17 GO498_00980 PF13411 MerR HTH family regulatory protein GO498_00985 PF03889 Alternative ribosome-rescue factor A GO498_00990 PF01741 Large-conductance mechanosensitive channel, MscL GO498_00995 PF02254 TrkA-N domain GO498_00995 PF02080 TrkA-C domain GO498_01000 PF01189 16S rRNA methyltransferase RsmB/F GO498_01000 PF01029 NusB family GO498_01005 PF02911 Formyl transferase, C-terminal domain GO498_01005 PF00551 Formyl transferase GO498_01010 PF01327 Polypeptide deformylase GO498_01015 PF02481 DNA recombination-mediator protein A GO498_01015 PF17782 DprA winged helix domain GO498_01020 PF01396 Topoisomerase DNA binding C4 zinc finger GO498_01025 PF01300 Telomere recombination GO498_01030 PF18317 Shikimate 5'-dehydrogenase C-terminal domain GO498_01030 PF08501 Shikimate dehydrogenase substrate binding domain GO498_01030 PF01488 Shikimate / quinate 5-dehydrogenase GO498_01035 PF07369 Protein of unknown function (DUF1488) GO498_01040 PF00132 Bacterial transferase hexapeptide (six repeats) GO498_01080 PF03466 LysR substrate binding domain GO498_01080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GO498_01085 PF04219 Protein of unknown function, DUF GO498_01090 PF01078 Magnesium chelatase, subunit ChlI GO498_01090 PF13335 Magnesium chelatase, subunit ChlI C-terminal GO498_01095 PF08046 IlvGEDA operon leader peptide GO498_01100 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain GO498_01100 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain GO498_01100 PF00205 Thiamine pyrophosphate enzyme, central domain GO498_01110 PF01063 Amino-transferase class IV GO498_01115 PF00920 Dehydratase family GO498_01120 PF00585 C-terminal regulatory domain of Threonine dehydratase GO498_01120 PF00291 Pyridoxal-phosphate dependent enzyme GO498_01125 PF03466 LysR substrate binding domain GO498_01125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GO498_01130 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain GO498_01130 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain GO498_01135 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ GO498_01145 PF00580 UvrD/REP helicase N-terminal domain GO498_01145 PF13361 UvrD-like helicase C-terminal domain GO498_01150 PF02541 Ppx/GppA phosphatase family GO498_01155 PF00271 Helicase conserved C-terminal domain GO498_01155 PF00270 DEAD/DEAH box helicase GO498_01160 PF00085 Thioredoxin GO498_01165 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GO498_01165 PF07498 Rho termination factor, N-terminal domain GO498_01165 PF07497 Rho termination factor, RNA-binding domain GO498_01170 PF00953 Glycosyl transferase family 4 GO498_01175 PF02706 Chain length determinant protein GO498_01180 PF02350 UDP-N-acetylglucosamine 2-epimerase GO498_01185 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain GO498_01185 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain GO498_01185 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain GO498_01190 PF16363 GDP-mannose 4,6 dehydratase GO498_01195 PF00483 Nucleotidyl transferase GO498_01205 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family GO498_01210 PF01943 Polysaccharide biosynthesis protein GO498_01215 PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 GO498_01220 PF06899 WzyE protein, O-antigen assembly polymerase GO498_01225 PF03808 Glycosyl transferase WecB/TagA/CpsF family GO498_01255 PF07719 Tetratricopeptide repeat GO498_01255 PF07219 HemY protein N-terminus GO498_01260 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase GO498_01265 PF02602 Uroporphyrinogen-III synthase HemD GO498_01270 PF03900 Porphobilinogen deaminase, C-terminal domain GO498_01270 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain GO498_01275 PF01295 Adenylate cyclase, class-I GO498_01275 PF12633 Adenylate cyclase NT domain GO498_01280 PF01491 Frataxin-like domain GO498_01285 PF13627 Prokaryotic lipoprotein-attachment site GO498_01290 PF01678 Diaminopimelate epimerase GO498_01295 PF04340 Protein of unknown function, DUF484 GO498_01300 PF02899 Phage integrase, N-terminal SAM-like domain GO498_01300 PF00589 Phage integrase family GO498_01305 PF13419 Haloacid dehalogenase-like hydrolase GO498_01310 PF00580 UvrD/REP helicase N-terminal domain GO498_01310 PF13361 UvrD-like helicase C-terminal domain GO498_01320 PF00892 EamA-like transporter family GO498_01325 PF03061 Thioesterase superfamily GO498_01330 PF02253 Phospholipase A1 GO498_01335 PF16124 RecQ zinc-binding GO498_01335 PF00270 DEAD/DEAH box helicase GO498_01335 PF00271 Helicase conserved C-terminal domain GO498_01335 PF00570 HRDC domain GO498_01335 PF09382 RQC domain GO498_01340 PF12146 Serine aminopeptidase, S33 GO498_01355 PF00577 Outer membrane usher protein GO498_01355 PF13953 PapC C-terminal domain GO498_01355 PF13954 PapC N-terminal domain GO498_01360 PF02753 Pili assembly chaperone PapD, C-terminal domain GO498_01360 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain GO498_01365 PF00419 Fimbrial protein GO498_01375 PF12795 Mechanosensitive ion channel porin domain GO498_01375 PF12794 Mechanosensitive ion channel inner membrane domain 1 GO498_01375 PF00924 Mechanosensitive ion channel GO498_01380 PF02666 Phosphatidylserine decarboxylase GO498_01385 PF03193 RsgA GTPase GO498_01390 PF00929 Exonuclease GO498_01420 PF08331 Domain of unknown function (DUF1730) GO498_01425 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE GO498_01430 PF01520 N-acetylmuramoyl-L-alanine amidase GO498_01435 PF01119 DNA mismatch repair protein, C-terminal domain GO498_01435 PF08676 MutL C terminal dimerisation domain GO498_01445 PF17209 Hfq protein GO498_01450 PF13167 GTP-binding GTPase N-terminal GO498_01450 PF01926 50S ribosome-binding GTPase GO498_01450 PF16360 GTP-binding GTPase Middle Region GO498_01455 PF01145 SPFH domain / Band 7 family GO498_01455 PF12221 Bacterial membrane protein N terminal GO498_01460 PF01145 SPFH domain / Band 7 family GO498_01465 PF00709 Adenylosuccinate synthetase GO498_01470 PF02082 Transcriptional regulator GO498_01475 PF08461 Ribonuclease R winged-helix domain GO498_01475 PF08206 Ribonuclease B OB domain GO498_01475 PF00773 RNB domain GO498_01475 PF00575 S1 RNA binding domain GO498_01475 PF17876 Cold shock domain GO498_01480 PF00588 SpoU rRNA Methylase family GO498_01480 PF08032 RNA 2'-O ribose methyltransferase substrate binding GO498_01485 PF01250 Ribosomal protein S6 GO498_01490 PF00436 Single-strand binding protein family GO498_01495 PF01084 Ribosomal protein S18 GO498_01500 PF01281 Ribosomal protein L9, N-terminal domain GO498_01500 PF03948 Ribosomal protein L9, C-terminal domain GO498_01505 PF08525 Opacity-associated protein A N-terminal motif GO498_01505 PF04225 Opacity-associated protein A LysM-like domain GO498_01510 PF01197 Ribosomal protein L31 GO498_01515 PF00444 Ribosomal protein L36 GO498_01520 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment GO498_01530 PF12323 Helix-turn-helix domain GO498_01530 PF01385 Probable transposase GO498_01530 PF07282 Putative transposase DNA-binding domain GO498_01535 PF00171 Aldehyde dehydrogenase family GO498_01540 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase GO498_01540 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase GO498_01545 PF00459 Inositol monophosphatase family GO498_01550 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) GO498_01555 PF06526 Protein of unknown function (DUF1107) GO498_01560 PF01595 Cyclin M transmembrane N-terminal domain GO498_01560 PF03471 Transporter associated domain GO498_01560 PF00571 CBS domain GO498_01565 PF01625 Peptide methionine sulfoxide reductase GO498_01570 PF01103 Surface antigen GO498_01570 PF07244 Surface antigen variable number repeat GO498_01570 PF17243 POTRA domain TamA domain 1 GO498_01575 PF04357 TamB, inner membrane protein subunit of TAM complex GO498_01580 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like GO498_01600 PF00719 Inorganic pyrophosphatase GO498_01605 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain GO498_01610 PF08245 Mur ligase middle domain GO498_01610 PF01225 Mur ligase family, catalytic domain GO498_01610 PF02875 Mur ligase family, glutamate ligase domain GO498_01615 PF01316 Arginine repressor, DNA binding domain GO498_01615 PF02863 Arginine repressor, C-terminal domain GO498_01620 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain GO498_01620 PF00056 lactate/malate dehydrogenase, NAD binding domain GO498_01625 PF13693 Winged helix-turn-helix DNA-binding GO498_01640 PF00348 Polyprenyl synthetase GO498_01645 PF00829 Ribosomal prokaryotic L21 protein GO498_01650 PF01016 Ribosomal L27 protein GO498_01655 PF01926 50S ribosome-binding GTPase GO498_01655 PF01018 GTP1/OBG GO498_01660 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family GO498_01665 PF01272 Transcription elongation factor, GreA/GreB, C-term GO498_01665 PF03449 Transcription elongation factor, N-terminal GO498_01670 PF01985 CRS1 / YhbY (CRM) domain GO498_01675 PF01728 FtsJ-like methyltransferase GO498_01680 PF00004 ATPase family associated with various cellular activities (AAA) GO498_01680 PF17862 AAA+ lid domain GO498_01680 PF06480 FtsH Extracellular GO498_01680 PF01434 Peptidase family M41 GO498_01685 PF00809 Pterin binding enzyme GO498_01690 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain GO498_01690 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III GO498_01690 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II GO498_01690 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I GO498_01695 PF03840 Preprotein translocase SecG subunit GO498_01710 PF02576 RimP N-terminal domain GO498_01710 PF17384 RimP C-terminal SH3 domain GO498_01715 PF00575 S1 RNA binding domain GO498_01715 PF08529 NusA N-terminal domain GO498_01715 PF13184 NusA-like KH domain GO498_01720 PF08364 Bacterial translation initiation factor IF-2 associated region GO498_01720 PF11987 Translation-initiation factor 2 GO498_01720 PF03144 Elongation factor Tu domain 2 GO498_01720 PF04760 Translation initiation factor IF-2, N-terminal region GO498_01720 PF00009 Elongation factor Tu GTP binding domain GO498_01725 PF02033 Ribosome-binding factor A GO498_01730 PF01509 TruB family pseudouridylate synthase (N terminal domain) GO498_01730 PF16198 tRNA pseudouridylate synthase B C-terminal domain GO498_01730 PF09157 Pseudouridine synthase II TruB, C-terminal GO498_01735 PF00312 Ribosomal protein S15 GO498_01740 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain GO498_01740 PF00575 S1 RNA binding domain GO498_01740 PF03725 3' exoribonuclease family, domain 2 GO498_01740 PF01138 3' exoribonuclease family, domain 1 GO498_01740 PF00013 KH domain GO498_01745 PF13181 Tetratricopeptide repeat GO498_01745 PF07719 Tetratricopeptide repeat GO498_01750 PF00270 DEAD/DEAH box helicase GO498_01750 PF00271 Helicase conserved C-terminal domain GO498_01750 PF12343 Cold shock protein DEAD box A GO498_01750 PF03880 DbpA RNA binding domain GO498_01755 PF08348 YheO-like PAS domain GO498_01755 PF13309 HTH domain GO498_01765 PF01042 Endoribonuclease L-PSP GO498_01770 PF07690 Major Facilitator Superfamily GO498_01790 PF00072 Response regulator receiver domain GO498_01790 PF04397 LytTr DNA-binding domain GO498_01795 PF06580 Histidine kinase GO498_01795 PF07694 5TMR of 5TMR-LYT GO498_01800 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GO498_01800 PF00529 HlyD membrane-fusion protein of T1SS GO498_01815 PF00419 Fimbrial protein GO498_01820 PF02753 Pili assembly chaperone PapD, C-terminal domain GO498_01820 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain GO498_01825 PF13954 PapC N-terminal domain GO498_01825 PF00577 Outer membrane usher protein GO498_01825 PF13953 PapC C-terminal domain GO498_01830 PF00419 Fimbrial protein GO498_01840 PF09160 FimH, mannose binding GO498_01860 PF13508 Acetyltransferase (GNAT) domain GO498_01865 PF01541 GIY-YIG catalytic domain GO498_01870 PF07338 Protein of unknown function (DUF1471) GO498_01895 PF13597 Anaerobic ribonucleoside-triphosphate reductase GO498_01895 PF03477 ATP cone domain GO498_01905 PF01042 Endoribonuclease L-PSP GO498_01910 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain GO498_01910 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain GO498_01915 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain GO498_01915 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain GO498_01925 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain GO498_01925 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain GO498_01935 PF06877 Regulator of ribonuclease activity B GO498_01940 PF02678 Pirin GO498_01940 PF05726 Pirin C-terminal cupin domain GO498_01945 PF13978 Protein of unknown function (DUF4223) GO498_01950 PF00583 Acetyltransferase (GNAT) family GO498_01955 PF00133 tRNA synthetases class I (I, L, M and V) GO498_01955 PF08264 Anticodon-binding domain of tRNA GO498_01955 PF10458 Valyl tRNA synthetase tRNA binding arm GO498_01960 PF04364 DNA polymerase III chi subunit, HolC GO498_01965 PF02789 Cytosol aminopeptidase family, N-terminal domain GO498_01965 PF00883 Cytosol aminopeptidase family, catalytic domain GO498_01970 PF03739 Lipopolysaccharide export system permease LptF/LptG GO498_01975 PF03739 Lipopolysaccharide export system permease LptF/LptG GO498_01980 PF00144 Beta-lactamase GO498_01990 PF13356 Arm DNA-binding domain GO498_01990 PF00589 Phage integrase family GO498_01995 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) GO498_02035 PF12323 Helix-turn-helix domain GO498_02035 PF07282 Putative transposase DNA-binding domain GO498_02035 PF01385 Probable transposase GO498_02050 PF00472 RF-1 domain GO498_02060 PF00455 DeoR C terminal sensor domain GO498_02060 PF08220 DeoR-like helix-turn-helix domain GO498_02065 PF01791 DeoC/LacD family aldolase GO498_02070 PF00294 pfkB family carbohydrate kinase GO498_02075 PF13580 SIS domain GO498_02080 PF00367 phosphotransferase system, EIIB GO498_02080 PF02378 Phosphotransferase system, EIIC GO498_02085 PF01380 SIS domain GO498_02085 PF01418 Helix-turn-helix domain, rpiR family GO498_02100 PF00205 Thiamine pyrophosphate enzyme, central domain GO498_02100 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain GO498_02100 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain GO498_02105 PF01842 ACT domain GO498_02110 PF01545 Cation efflux family GO498_02125 PF00860 Permease family GO498_02130 PF13302 Acetyltransferase (GNAT) domain GO498_02135 PF00999 Sodium/hydrogen exchanger family GO498_02140 PF00892 EamA-like transporter family GO498_02145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GO498_02145 PF03466 LysR substrate binding domain GO498_02150 PF08267 Cobalamin-independent synthase, N-terminal domain GO498_02150 PF01717 Cobalamin-independent synthase, Catalytic domain GO498_02160 PF06078 Bacterial protein of unknown function (DUF937) GO498_02165 PF01048 Phosphorylase superfamily GO498_02175 PF09335 SNARE associated Golgi protein GO498_02180 PF02646 RmuC family GO498_02185 PF01209 ubiE/COQ5 methyltransferase family GO498_02190 PF02036 SCP-2 sterol transfer family GO498_02195 PF03109 ABC1 family GO498_02200 PF02416 mttA/Hcf106 family GO498_02210 PF00902 Sec-independent protein translocase protein (TatC) GO498_02215 PF02357 Transcription termination factor nusG GO498_02220 PF03575 Peptidase family S51 GO498_02225 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase GO498_02230 PF00970 Oxidoreductase FAD-binding domain GO498_02230 PF00175 Oxidoreductase NAD-binding domain GO498_02235 PF02803 Thiolase, C-terminal domain GO498_02235 PF00108 Thiolase, N-terminal domain GO498_02240 PF00378 Enoyl-CoA hydratase/isomerase GO498_02240 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain GO498_02240 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain GO498_02245 PF00557 Metallopeptidase family M24 GO498_02250 PF09186 Domain of unknown function (DUF1949) GO498_02250 PF01205 Uncharacterized protein family UPF0029 GO498_02255 PF02386 Cation transport protein GO498_02260 PF12724 Flavodoxin domain GO498_02290 PF01566 Natural resistance-associated macrophage protein GO498_02295 PF03746 LamB/YcsF family GO498_02300 PF02682 Carboxyltransferase domain, subdomain C and D GO498_02305 PF02785 Biotin carboxylase C-terminal domain GO498_02305 PF00364 Biotin-requiring enzyme GO498_02305 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain GO498_02305 PF00289 Biotin carboxylase, N-terminal domain GO498_02310 PF01925 Sulfite exporter TauE/SafE GO498_02325 PF03466 LysR substrate binding domain GO498_02325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GO498_02330 PF00196 Bacterial regulatory proteins, luxR family GO498_02330 PF00072 Response regulator receiver domain GO498_02335 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term GO498_02335 PF07730 Histidine kinase GO498_02335 PF00672 HAMP domain GO498_02335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GO498_02340 PF07690 Major Facilitator Superfamily GO498_02345 PF14710 Respiratory nitrate reductase alpha N-terminal GO498_02345 PF00384 Molybdopterin oxidoreductase GO498_02345 PF01568 Molydopterin dinucleotide binding domain GO498_02350 PF14711 Respiratory nitrate reductase beta C-terminal GO498_02350 PF13247 4Fe-4S dicluster domain GO498_02355 PF02613 Nitrate reductase delta subunit GO498_02360 PF02665 Nitrate reductase gamma subunit GO498_02365 PF01070 FMN-dependent dehydrogenase GO498_02370 PF08019 Phosphoethanolamine transferase EptA/EptB GO498_02370 PF00884 Sulfatase GO498_02385 PF01590 GAF domain GO498_02385 PF00158 Sigma-54 interaction domain GO498_02390 PF12798 4Fe-4S binding domain GO498_02390 PF00037 4Fe-4S binding domain GO498_02395 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA GO498_02400 PF01455 HupF/HypC family GO498_02405 PF00893 Small Multidrug Resistance protein GO498_02410 PF02313 Fumarate reductase subunit D GO498_02415 PF02300 Fumarate reductase subunit C GO498_02420 PF13085 2Fe-2S iron-sulfur cluster binding domain GO498_02420 PF13183 4Fe-4S dicluster domain GO498_02425 PF00890 FAD binding domain GO498_02425 PF02910 Fumarate reductase flavoprotein C-term GO498_02430 PF00152 tRNA synthetases class II (D, K and N) GO498_02435 PF03009 Glycerophosphoryl diester phosphodiesterase family GO498_02440 PF07690 Major Facilitator Superfamily GO498_02445 PF01266 FAD dependent oxidoreductase GO498_02445 PF04324 BFD-like [2Fe-2S] binding domain GO498_02450 PF00890 FAD binding domain GO498_02455 PF02754 Cysteine-rich domain GO498_02455 PF13183 4Fe-4S dicluster domain GO498_02460 PF00465 Iron-containing alcohol dehydrogenase GO498_02465 PF02592 Putative vitamin uptake transporter GO498_02475 PF01206 Sulfurtransferase TusA GO498_02485 PF07282 Putative transposase DNA-binding domain GO498_02485 PF01385 Probable transposase GO498_02485 PF12323 Helix-turn-helix domain GO498_02490 PF00529 HlyD membrane-fusion protein of T1SS GO498_02490 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GO498_02495 PF00873 AcrB/AcrD/AcrF family GO498_02500 PF00403 Heavy-metal-associated domain GO498_02505 PF07947 YhhN family GO498_02515 PF06611 Protein of unknown function (DUF1145) GO498_02525 PF02881 SRP54-type protein, helical bundle domain GO498_02525 PF00448 SRP54-type protein, GTPase domain GO498_02530 PF00005 ABC transporter GO498_02535 PF18075 FtsX extracellular domain GO498_02535 PF02687 FtsX-like permease family GO498_02540 PF04542 Sigma-70 region 2 GO498_02540 PF00140 Sigma-70 factor, region 1.2 GO498_02540 PF04545 Sigma-70, region 4 GO498_02545 PF02595 Glycerate kinase family GO498_02550 PF12568 Acetyltransferase (GNAT) domain, PanZ GO498_02555 PF07690 Major Facilitator Superfamily GO498_02560 PF01047 MarR family GO498_02565 PF01435 Peptidase family M48 GO498_02570 PF17912 MalK OB fold domain GO498_02570 PF00005 ABC transporter GO498_02575 PF00528 Binding-protein-dependent transport system inner membrane component GO498_02580 PF00528 Binding-protein-dependent transport system inner membrane component GO498_02585 PF13416 Bacterial extracellular solute-binding protein GO498_02590 PF03009 Glycerophosphoryl diester phosphodiesterase family GO498_02595 PF07690 Major Facilitator Superfamily GO498_02620 PF02954 Bacterial regulatory protein, Fis family GO498_02625 PF01207 Dihydrouridine synthase (Dus) GO498_02635 PF00474 Sodium:solute symporter family GO498_02640 PF06196 Protein of unknown function (DUF997) GO498_02645 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain GO498_02645 PF00289 Biotin carboxylase, N-terminal domain GO498_02645 PF02785 Biotin carboxylase C-terminal domain GO498_02650 PF00364 Biotin-requiring enzyme GO498_02655 PF01220 Dehydroquinase class II GO498_02660 PF08240 Alcohol dehydrogenase GroES-like domain GO498_02660 PF00107 Zinc-binding dehydrogenase GO498_02670 PF04085 rod shape-determining protein MreC GO498_02675 PF04093 rod shape-determining protein MreD GO498_02680 PF02545 Maf-like protein GO498_02685 PF10150 Ribonuclease E/G family GO498_02685 PF00575 S1 RNA binding domain GO498_02690 PF13502 AsmA-like C-terminal region GO498_02690 PF13116 Protein of unknown function GO498_02695 PF00795 Carbon-nitrogen hydrolase GO498_02700 PF01523 Putative modulator of DNA gyrase GO498_02710 PF01337 Barstar (barnase inhibitor) GO498_02715 PF04751 Protein of unknown function (DUF615) GO498_02720 PF01523 Putative modulator of DNA gyrase GO498_02725 PF01272 Transcription elongation factor, GreA/GreB, C-term GO498_02725 PF14760 Rnk N-terminus GO498_02730 PF00381 PTS HPr component phosphorylation site GO498_02735 PF03668 P-loop ATPase protein family GO498_02740 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 GO498_02745 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein GO498_02750 PF00309 Sigma-54 factor, Activator interacting domain (AID) GO498_02750 PF04963 Sigma-54 factor, core binding domain GO498_02750 PF04552 Sigma-54, DNA binding domain GO498_02755 PF00005 ABC transporter GO498_02755 PF12399 Branched-chain amino acid ATP-binding cassette transporter GO498_02760 PF03968 OstA-like protein GO498_02765 PF06835 Lipopolysaccharide-assembly, LptC-related GO498_02775 PF01380 SIS domain GO498_02775 PF00571 CBS domain GO498_02780 PF01699 Sodium/calcium exchanger protein GO498_02785 PF00005 ABC transporter GO498_02790 PF02405 Permease MlaE GO498_02795 PF02470 MlaD protein GO498_02800 PF05494 MlaC protein GO498_02810 PF01722 BolA-like protein GO498_02815 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) GO498_02825 PF13180 PDZ domain GO498_02830 PF00595 PDZ domain GO498_02830 PF13180 PDZ domain GO498_02835 PF06295 Protein of unknown function (DUF1043) GO498_02840 PF03969 AFG1-like ATPase GO498_02845 PF00572 Ribosomal protein L13 GO498_02850 PF00380 Ribosomal protein S9/S16 GO498_02855 PF02798 Glutathione S-transferase, N-terminal domain GO498_02855 PF00043 Glutathione S-transferase, C-terminal domain GO498_02860 PF04386 Stringent starvation protein B GO498_02865 PF13411 MerR HTH family regulatory protein GO498_02870 PF01546 Peptidase family M20/M25/M40 GO498_02870 PF07687 Peptidase dimerisation domain GO498_02875 PF03606 C4-dicarboxylate anaerobic carrier GO498_02880 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster GO498_02880 PF07992 Pyridine nucleotide-disulphide oxidoreductase GO498_02885 PF00310 Glutamine amidotransferases class-II GO498_02885 PF04898 Glutamate synthase central domain GO498_02885 PF01645 Conserved region in glutamate synthase GO498_02885 PF01493 GXGXG motif GO498_02890 PF00072 Response regulator receiver domain GO498_02890 PF00989 PAS fold GO498_02890 PF00512 His Kinase A (phospho-acceptor) domain GO498_02890 PF01627 Hpt domain GO498_02890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GO498_02890 PF18415 Histidine kinase receptor ArcB trans-membrane domain GO498_02900 PF00912 Transglycosylase GO498_02905 PF12833 Helix-turn-helix domain GO498_02910 PF01774 UreD urease accessory protein GO498_02915 PF00547 Urease, gamma subunit GO498_02920 PF00699 Urease beta subunit GO498_02925 PF00449 Urease alpha-subunit, N-terminal domain GO498_02925 PF01979 Amidohydrolase family GO498_02930 PF05194 UreE urease accessory protein, C-terminal domain GO498_02930 PF02814 UreE urease accessory protein, N-terminal domain GO498_02935 PF01730 UreF GO498_02940 PF02492 CobW/HypB/UreG, nucleotide-binding domain GO498_02945 PF04972 BON domain GO498_02950 PF13580 SIS domain GO498_02955 PF02021 Uncharacterised protein family UPF0102 GO498_02960 PF04348 LppC putative lipoprotein GO498_02965 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases GO498_02975 PF17954 Quercetinase C-terminal cupin domain GO498_02975 PF02678 Pirin GO498_02980 PF03466 LysR substrate binding domain GO498_02980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GO498_02985 PF07681 DoxX GO498_02995 PF07332 Putative Actinobacterial Holin-X, holin superfamily III GO498_03000 PF05957 Bacterial protein of unknown function (DUF883) GO498_03005 PF09335 SNARE associated Golgi protein GO498_03010 PF00375 Sodium:dicarboxylate symporter family GO498_03015 PF07992 Pyridine nucleotide-disulphide oxidoreductase GO498_03015 PF00724 NADH:flavin oxidoreductase / NADH oxidase family GO498_03025 PF05193 Peptidase M16 inactive domain GO498_03025 PF00675 Insulinase (Peptidase family M16) GO498_03030 PF06472 ABC transporter transmembrane region 2 GO498_03030 PF00005 ABC transporter GO498_03035 PF07715 TonB-dependent Receptor Plug Domain GO498_03045 PF04542 Sigma-70 region 2 GO498_03045 PF08281 Sigma-70, region 4 GO498_03055 PF12848 ABC transporter GO498_03055 PF00005 ABC transporter GO498_03060 PF01464 Transglycosylase SLT domain GO498_03060 PF14718 Soluble lytic murein transglycosylase L domain GO498_03065 PF01371 Trp repressor protein GO498_03070 PF01931 Protein of unknown function DUF84 GO498_03075 PF00300 Histidine phosphatase superfamily (branch 1) GO498_03080 PF12833 Helix-turn-helix domain GO498_03080 PF06445 GyrI-like small molecule binding domain GO498_03085 PF05981 CreA protein GO498_03090 PF00486 Transcriptional regulatory protein, C terminal GO498_03090 PF00072 Response regulator receiver domain GO498_03095 PF00742 Homoserine dehydrogenase GO498_03095 PF01842 ACT domain GO498_03095 PF03447 Homoserine dehydrogenase, NAD binding domain GO498_03095 PF13840 ACT domain GO498_03095 PF00696 Amino acid kinase family GO498_03100 PF00288 GHMP kinases N terminal domain GO498_03100 PF08544 GHMP kinases C terminal GO498_03105 PF00291 Pyridoxal-phosphate dependent enzyme GO498_03105 PF14821 Threonine synthase N terminus GO498_03115 PF03883 Peroxide stress protein YaaA GO498_03120 PF00923 Transaldolase/Fructose-6-phosphate aldolase GO498_03130 PF00994 Probable molybdopterin binding domain GO498_03135 PF00012 Hsp70 protein GO498_03140 PF00684 DnaJ central domain GO498_03140 PF01556 DnaJ C terminal domain GO498_03140 PF00226 DnaJ domain GO498_03145 PF06965 Na+/H+ antiporter 1 GO498_03150 PF03466 LysR substrate binding domain GO498_03150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GO498_03155 PF01649 Ribosomal protein S20 GO498_03165 PF01687 Riboflavin kinase GO498_03165 PF06574 FAD synthetase GO498_03170 PF08264 Anticodon-binding domain of tRNA GO498_03170 PF00133 tRNA synthetases class I (I, L, M and V) GO498_03170 PF06827 Zinc finger found in FPG and IleRS GO498_03175 PF01252 Signal peptidase (SPase) II GO498_03180 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase GO498_03185 PF02401 LytB protein GO498_03190 PF05173 Dihydrodipicolinate reductase, C-terminus GO498_03190 PF01113 Dihydrodipicolinate reductase, N-terminus GO498_03195 PF00117 Glutamine amidotransferase class-I GO498_03195 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain GO498_03200 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain GO498_03200 PF02142 MGS-like domain GO498_03200 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain GO498_03215 PF00248 Aldo/keto reductase family GO498_03220 PF00465 Iron-containing alcohol dehydrogenase GO498_03225 PF08241 Methyltransferase domain GO498_03230 PF09335 SNARE associated Golgi protein GO498_03235 PF01053 Cys/Met metabolism PLP-dependent enzyme GO498_03240 PF01618 MotA/TolQ/ExbB proton channel family GO498_03245 PF02472 Biopolymer transport protein ExbD/TolR GO498_03250 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit GO498_03250 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal GO498_03255 PF13247 4Fe-4S dicluster domain GO498_03260 PF03916 Polysulphide reductase, NrfD GO498_03265 PF00374 Nickel-dependent hydrogenase GO498_03270 PF01750 Hydrogenase maturation protease GO498_03275 PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE GO498_03280 PF02492 CobW/HypB/UreG, nucleotide-binding domain GO498_03285 PF01455 HupF/HypC family GO498_03290 PF01924 Hydrogenase formation hypA family GO498_03295 PF02769 AIR synthase related protein, C-terminal domain GO498_03295 PF00586 AIR synthase related protein, N-terminal domain GO498_03300 PF04143 Sulphur transport GO498_03305 PF01206 Sulfurtransferase TusA GO498_03310 PF04381 Putative exonuclease, RdgC GO498_03315 PF13609 Gram-negative porin GO498_03320 PF02872 5'-nucleotidase, C-terminal domain GO498_03320 PF00149 Calcineurin-like phosphoesterase GO498_03325 PF00445 Ribonuclease T2 family GO498_03330 PF17936 Bacterial Ig domain GO498_03330 PF00149 Calcineurin-like phosphoesterase GO498_03330 PF02872 5'-nucleotidase, C-terminal domain GO498_03345 PF13476 AAA domain GO498_03350 PF12320 Type 5 capsule protein repressor C-terminal domain GO498_03350 PF00149 Calcineurin-like phosphoesterase GO498_03355 PF00486 Transcriptional regulatory protein, C terminal GO498_03355 PF00072 Response regulator receiver domain GO498_03360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GO498_03360 PF11808 Phosphate regulon sensor protein PhoR GO498_03360 PF00989 PAS fold GO498_03360 PF00512 His Kinase A (phospho-acceptor) domain GO498_03365 PF05525 Branched-chain amino acid transport protein GO498_03410 PF01292 Prokaryotic cytochrome b561 GO498_03415 PF13247 4Fe-4S dicluster domain GO498_03425 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain GO498_03425 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 GO498_03430 PF12800 4Fe-4S binding domain GO498_03430 PF13247 4Fe-4S dicluster domain GO498_03440 PF10417 C-terminal domain of 1-Cys peroxiredoxin GO498_03440 PF00578 AhpC/TSA family GO498_03445 PF04336 Acyl carrier protein phosphodiesterase GO498_03450 PF02547 Queuosine biosynthesis protein GO498_03455 PF01702 Queuine tRNA-ribosyltransferase GO498_03460 PF02699 Preprotein translocase subunit GO498_03465 PF13721 SecD export protein N-terminal TM region GO498_03465 PF02355 Protein export membrane protein GO498_03465 PF07549 SecD/SecF GG Motif GO498_03470 PF07549 SecD/SecF GG Motif GO498_03470 PF02355 Protein export membrane protein GO498_03475 PF03477 ATP cone domain GO498_03480 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region GO498_03480 PF01872 RibD C-terminal domain GO498_03485 PF00885 6,7-dimethyl-8-ribityllumazine synthase GO498_03490 PF01029 NusB family GO498_03495 PF02769 AIR synthase related protein, C-terminal domain GO498_03495 PF00586 AIR synthase related protein, N-terminal domain GO498_03500 PF03831 PhnA domain GO498_03500 PF08274 PhnA Zinc-Ribbon GO498_03510 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin GO498_03515 PF00356 Bacterial regulatory proteins, lacI family GO498_03520 PF00294 pfkB family carbohydrate kinase GO498_03525 PF13407 Periplasmic binding protein domain GO498_03530 PF02653 Branched-chain amino acid transport system / permease component GO498_03535 PF00005 ABC transporter GO498_03540 PF05025 RbsD / FucU transport protein family GO498_03545 PF13292 1-deoxy-D-xylulose-5-phosphate synthase GO498_03545 PF02779 Transketolase, pyrimidine binding domain GO498_03545 PF02780 Transketolase, C-terminal domain GO498_03550 PF00348 Polyprenyl synthetase GO498_03555 PF02609 Exonuclease VII small subunit GO498_03560 PF02568 Thiamine biosynthesis protein (ThiI) GO498_03560 PF02926 THUMP domain GO498_03570 PF01965 DJ-1/PfpI family GO498_03575 PF08546 Ketopantoate reductase PanE/ApbA C terminal GO498_03575 PF02558 Ketopantoate reductase PanE/ApbA GO498_03580 PF04461 Protein of unknown function (DUF520) GO498_03585 PF07690 Major Facilitator Superfamily GO498_03590 PF01040 UbiA prenyltransferase family GO498_03595 PF03626 Prokaryotic Cytochrome C oxidase subunit IV GO498_03600 PF00510 Cytochrome c oxidase subunit III GO498_03605 PF00115 Cytochrome C and Quinol oxidase polypeptide I GO498_03610 PF00116 Cytochrome C oxidase subunit II, periplasmic domain GO498_03610 PF06481 COX Aromatic Rich Motif GO498_03615 PF03502 Nucleoside-specific channel-forming protein, Tsx GO498_03620 PF00271 Helicase conserved C-terminal domain GO498_03620 PF00270 DEAD/DEAH box helicase GO498_03620 PF03880 DbpA RNA binding domain GO498_03625 PF07690 Major Facilitator Superfamily GO498_03630 PF08139 Prokaryotic membrane lipoprotein lipid attachment site GO498_03630 PF03923 Uncharacterized lipoprotein GO498_03635 PF01722 BolA-like protein GO498_03640 PF05698 Bacterial trigger factor protein (TF) C-terminus GO498_03640 PF05697 Bacterial trigger factor protein (TF) GO498_03640 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase GO498_03645 PF00574 Clp protease GO498_03650 PF06689 ClpX C4-type zinc finger GO498_03650 PF10431 C-terminal, D2-small domain, of ClpB protein GO498_03650 PF07724 AAA domain (Cdc48 subfamily) GO498_03655 PF05362 Lon protease (S16) C-terminal proteolytic domain GO498_03655 PF00004 ATPase family associated with various cellular activities (AAA) GO498_03655 PF02190 ATP-dependent protease La (LON) substrate-binding domain GO498_03660 PF00216 Bacterial DNA-binding protein GO498_03665 PF13145 PPIC-type PPIASE domain GO498_03670 PF10531 SLBB domain GO498_03680 PF06508 Queuosine biosynthesis protein QueC GO498_03685 PF01037 Lrp/AsnC ligand binding domain GO498_03685 PF13404 AsnC-type helix-turn-helix domain GO498_03690 PF00005 ABC transporter GO498_03690 PF00664 ABC transporter transmembrane region GO498_03695 PF00664 ABC transporter transmembrane region GO498_03695 PF00005 ABC transporter GO498_03700 PF00543 Nitrogen regulatory protein P-II GO498_03705 PF00909 Ammonium Transporter Family GO498_03720 PF05321 Haemolysin expression modulating protein GO498_03730 PF00873 AcrB/AcrD/AcrF family GO498_03735 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GO498_03735 PF00529 HlyD membrane-fusion protein of T1SS GO498_03740 PF00440 Bacterial regulatory proteins, tetR family GO498_03740 PF08361 MAATS-type transcriptional repressor, C-terminal region GO498_03745 PF02635 DsrE/DsrF-like family GO498_03750 PF12794 Mechanosensitive ion channel inner membrane domain 1 GO498_03750 PF12795 Mechanosensitive ion channel porin domain GO498_03750 PF00924 Mechanosensitive ion channel GO498_03765 PF00156 Phosphoribosyl transferase domain GO498_03770 PF12170 DNA polymerase III tau subunit V interacting with alpha GO498_03770 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding GO498_03770 PF12169 DNA polymerase III subunits gamma and tau domain III GO498_03775 PF02575 YbaB/EbfC DNA-binding family GO498_03780 PF13662 Toprim domain GO498_03780 PF02132 RecR protein GO498_03785 PF13722 5TM C-terminal transporter carbon starvation CstA GO498_03785 PF02554 Carbon starvation protein CstA GO498_03790 PF04328 Selenoprotein, putative GO498_03795 PF07683 Cobalamin synthesis protein cobW C-terminal domain GO498_03795 PF02492 CobW/HypB/UreG, nucleotide-binding domain GO498_03800 PF03313 Serine dehydratase alpha chain GO498_03805 PF03606 C4-dicarboxylate anaerobic carrier GO498_03810 PF01546 Peptidase family M20/M25/M40 GO498_03810 PF07687 Peptidase dimerisation domain GO498_03820 PF01554 MatE GO498_03825 PF01118 Semialdehyde dehydrogenase, NAD binding domain GO498_03825 PF16654 Diaminopimelic acid dehydrogenase C-terminal domain GO498_03830 PF09370 Phosphoenolpyruvate hydrolase-like GO498_03865 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) GO498_03870 PF07732 Multicopper oxidase GO498_03870 PF07731 Multicopper oxidase GO498_03870 PF00394 Multicopper oxidase GO498_03870 PF10518 TAT (twin-arginine translocation) pathway signal sequence GO498_03875 PF00156 Phosphoribosyl transferase domain GO498_03880 PF00484 Carbonic anhydrase GO498_03885 PF00005 ABC transporter GO498_03890 PF01061 ABC-2 type transporter GO498_03895 PF07690 Major Facilitator Superfamily GO498_03900 PF10735 Protein of unknown function (DUF2526) GO498_03905 PF01435 Peptidase family M48 GO498_03920 PF12800 4Fe-4S binding domain GO498_03920 PF13247 4Fe-4S dicluster domain GO498_03925 PF01568 Molydopterin dinucleotide binding domain GO498_03925 PF04879 Molybdopterin oxidoreductase Fe4S4 domain GO498_03925 PF00384 Molybdopterin oxidoreductase GO498_03935 PF04261 Dyp-type peroxidase family GO498_03950 PF13473 Cupredoxin-like domain GO498_03955 PF10634 Fe2+ transport protein GO498_03960 PF01527 Transposase GO498_03965 PF05638 Type VI secretion system effector, Hcp GO498_03980 PF03738 Glutathionylspermidine synthase preATP-grasp GO498_03980 PF05257 CHAP domain GO498_03985 PF03466 LysR substrate binding domain GO498_03985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GO498_03990 PF02447 GntP family permease GO498_03995 PF00291 Pyridoxal-phosphate dependent enzyme GO498_04000 PF00005 ABC transporter GO498_04000 PF08402 TOBE domain GO498_04005 PF00528 Binding-protein-dependent transport system inner membrane component GO498_04015 PF07690 Major Facilitator Superfamily GO498_04020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GO498_04020 PF07730 Histidine kinase GO498_04020 PF05231 MASE1 GO498_04025 PF00196 Bacterial regulatory proteins, luxR family GO498_04025 PF00072 Response regulator receiver domain GO498_04030 PF02261 Aspartate decarboxylase GO498_04035 PF02569 Pantoate-beta-alanine ligase GO498_04040 PF02548 Ketopantoate hydroxymethyltransferase GO498_04045 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) GO498_04050 PF12627 Probable RNA and SrmB- binding site of polymerase A GO498_04050 PF12626 Polymerase A arginine-rich C-terminus GO498_04050 PF01743 Poly A polymerase head domain GO498_04060 PF01258 Prokaryotic dksA/traR C4-type zinc finger GO498_04065 PF17746 SfsA N-terminal OB domain GO498_04065 PF03749 Sugar fermentation stimulation protein RE domain GO498_04070 PF00270 DEAD/DEAH box helicase GO498_04070 PF04408 Helicase associated domain (HA2) GO498_04070 PF00271 Helicase conserved C-terminal domain GO498_04070 PF08482 ATP-dependent helicase C-terminal GO498_04075 PF14814 Bifunctional transglycosylase second domain GO498_04075 PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal GO498_04075 PF00912 Transglycosylase GO498_04075 PF00905 Penicillin binding protein transpeptidase domain GO498_04080 PF00202 Aminotransferase class-III GO498_04085 PF01521 Iron-sulphur cluster biosynthesis GO498_04090 PF01497 Periplasmic binding protein GO498_04095 PF01048 Phosphorylase superfamily GO498_04100 PF01966 HD domain GO498_04100 PF13286 Phosphohydrolase-associated domain GO498_04105 PF05958 tRNA (Uracil-5-)-methyltransferase GO498_04105 PF01938 TRAM domain GO498_04110 PF02824 TGS domain GO498_04110 PF04607 Region found in RelA / SpoT proteins GO498_04110 PF13291 ACT domain GO498_04115 PF03819 MazG nucleotide pyrophosphohydrolase domain GO498_04125 PF00117 Glutamine amidotransferase class-I GO498_04125 PF06418 CTP synthase N-terminus GO498_04130 PF00113 Enolase, C-terminal TIM barrel domain GO498_04130 PF03952 Enolase, N-terminal domain GO498_04135 PF00939 Sodium:sulfate symporter transmembrane region GO498_04145 PF01476 LysM domain GO498_04145 PF01464 Transglycosylase SLT domain GO498_04150 PF00753 Metallo-beta-lactamase superfamily GO498_04150 PF16123 Hydroxyacylglutathione hydrolase C-terminus GO498_04155 PF08241 Methyltransferase domain GO498_04160 PF00075 RNase H GO498_04165 PF00929 Exonuclease GO498_04200 PF01032 FecCD transport family GO498_04205 PF00005 ABC transporter GO498_04215 PF04183 IucA / IucC family GO498_04215 PF06276 Ferric iron reductase FhuF-like transporter GO498_04220 PF07715 TonB-dependent Receptor Plug Domain GO498_04220 PF00593 TonB dependent receptor GO498_04225 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain GO498_04230 PF00291 Pyridoxal-phosphate dependent enzyme GO498_04235 PF02317 NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain GO498_04240 PF07690 Major Facilitator Superfamily GO498_04255 PF02779 Transketolase, pyrimidine binding domain GO498_04255 PF00456 Transketolase, thiamine diphosphate binding domain GO498_04255 PF02780 Transketolase, C-terminal domain GO498_04260 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain GO498_04260 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain GO498_04265 PF00162 Phosphoglycerate kinase GO498_04270 PF01116 Fructose-bisphosphate aldolase class-II GO498_04275 PF05154 TM2 domain GO498_04280 PF00854 POT family GO498_04285 PF01613 Flavin reductase like domain GO498_04295 PF01047 MarR family GO498_04300 PF02028 BCCT, betaine/carnitine/choline family transporter GO498_04315 PF00753 Metallo-beta-lactamase superfamily GO498_04315 PF12706 Beta-lactamase superfamily domain GO498_04320 PF00419 Fimbrial protein GO498_04325 PF00577 Outer membrane usher protein GO498_04325 PF13954 PapC N-terminal domain GO498_04325 PF13953 PapC C-terminal domain GO498_04330 PF02753 Pili assembly chaperone PapD, C-terminal domain GO498_04330 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain GO498_04335 PF00419 Fimbrial protein GO498_04340 PF00419 Fimbrial protein GO498_04360 PF00589 Phage integrase family GO498_04365 PF00419 Fimbrial protein GO498_04375 PF00577 Outer membrane usher protein GO498_04375 PF13953 PapC C-terminal domain GO498_04375 PF13954 PapC N-terminal domain GO498_04380 PF02753 Pili assembly chaperone PapD, C-terminal domain GO498_04380 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain GO498_04385 PF00419 Fimbrial protein GO498_04395 PF00419 Fimbrial protein GO498_04410 PF03806 AbgT putative transporter family GO498_04415 PF09350 Domain of unknown function (DUF1992) GO498_04420 PF02627 Carboxymuconolactone decarboxylase family GO498_04425 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase GO498_04430 PF02321 Outer membrane efflux protein GO498_04435 PF00529 HlyD membrane-fusion protein of T1SS GO498_04440 PF00664 ABC transporter transmembrane region GO498_04440 PF00005 ABC transporter GO498_04445 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) GO498_04445 PF00413 Matrixin GO498_04445 PF08548 Peptidase M10 serralysin C terminal GO498_04450 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) GO498_04450 PF00413 Matrixin GO498_04450 PF08548 Peptidase M10 serralysin C terminal GO498_04455 PF00413 Matrixin GO498_04455 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) GO498_04455 PF08548 Peptidase M10 serralysin C terminal GO498_04460 PF08548 Peptidase M10 serralysin C terminal GO498_04460 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) GO498_04460 PF00413 Matrixin GO498_04470 PF07687 Peptidase dimerisation domain GO498_04470 PF01546 Peptidase family M20/M25/M40 GO498_04480 PF13419 Haloacid dehalogenase-like hydrolase GO498_04485 PF03633 Glycosyl hydrolase family 65, C-terminal domain GO498_04485 PF03632 Glycosyl hydrolase family 65 central catalytic domain GO498_04485 PF03636 Glycosyl hydrolase family 65, N-terminal domain GO498_04490 PF02378 Phosphotransferase system, EIIC GO498_04490 PF00367 phosphotransferase system, EIIB GO498_04495 PF00356 Bacterial regulatory proteins, lacI family GO498_04510 PF01381 Helix-turn-helix GO498_04515 PF00419 Fimbrial protein GO498_04525 PF00577 Outer membrane usher protein GO498_04525 PF13953 PapC C-terminal domain GO498_04525 PF13954 PapC N-terminal domain GO498_04530 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain GO498_04530 PF02753 Pili assembly chaperone PapD, C-terminal domain GO498_04555 PF12833 Helix-turn-helix domain GO498_04560 PF12833 Helix-turn-helix domain GO498_04585 PF00664 ABC transporter transmembrane region GO498_04585 PF00005 ABC transporter GO498_04585 PF03412 Peptidase C39 family GO498_04595 PF16925 Tetracyclin repressor-like, C-terminal domain GO498_04595 PF00440 Bacterial regulatory proteins, tetR family GO498_04600 PF13520 Amino acid permease GO498_04605 PF01276 Orn/Lys/Arg decarboxylase, major domain GO498_04605 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain GO498_04605 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain GO498_04630 PF13614 AAA domain GO498_04645 PF03796 DnaB-like helicase C terminal domain GO498_04645 PF00772 DnaB-like helicase N terminal domain GO498_04685 PF01751 Toprim domain GO498_04685 PF01131 DNA topoisomerase GO498_04695 PF04754 Putative transposase, YhgA-like GO498_04825 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB GO498_04825 PF08479 POTRA domain, ShlB-type GO498_04825 PF17287 POTRA domain GO498_04830 PF05860 haemagglutination activity domain GO498_04830 PF13018 Extended Signal Peptide of Type V secretion system GO498_04830 PF13332 Hemagglutinin repeat GO498_04830 PF04829 Pre-toxin domain with VENN motif GO498_04840 PF04829 Pre-toxin domain with VENN motif GO498_04840 PF05860 haemagglutination activity domain GO498_04840 PF13332 Hemagglutinin repeat GO498_04935 PF00589 Phage integrase family GO498_04945 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain GO498_04945 PF01464 Transglycosylase SLT domain GO498_04950 PF04362 Bacterial Fe(2+) trafficking GO498_04955 PF00730 HhH-GPD superfamily base excision DNA repair protein GO498_04955 PF10576 Iron-sulfur binding domain of endonuclease III GO498_04955 PF00633 Helix-hairpin-helix motif GO498_04955 PF14815 NUDIX domain GO498_04960 PF02390 Putative methyltransferase GO498_04965 PF04320 Protein with unknown function (DUF469) GO498_04970 PF04960 Glutaminase GO498_04975 PF11101 Protein of unknown function (DUF2884) GO498_04980 PF01497 Periplasmic binding protein GO498_04985 PF06969 HemN C-terminal domain GO498_04985 PF04055 Radical SAM superfamily GO498_04990 PF01725 Ham1 family GO498_04995 PF02325 YGGT family GO498_05000 PF03807 NADP oxidoreductase coenzyme F420-dependent GO498_05000 PF14748 Pyrroline-5-carboxylate reductase dimerisation GO498_05005 PF01168 Alanine racemase, N-terminal domain GO498_05010 PF00437 Type II/IV secretion system protein GO498_05015 PF03652 Holliday junction resolvase GO498_05020 PF02622 Uncharacterized ACR, COG1678 GO498_05025 PF02951 Prokaryotic glutathione synthetase, N-terminal domain GO498_05025 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain GO498_05030 PF04452 RNA methyltransferase GO498_05050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GO498_05050 PF03466 LysR substrate binding domain GO498_05055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GO498_05055 PF03466 LysR substrate binding domain GO498_05060 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain GO498_05060 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain GO498_05065 PF09317 Domain of unknown function (DUF1974) GO498_05065 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GO498_05065 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GO498_05070 PF13580 SIS domain GO498_05075 PF13230 Glutamine amidotransferases class-II GO498_05080 PF03734 L,D-transpeptidase catalytic domain GO498_05085 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) GO498_05085 PF11973 NQRA C-terminal domain GO498_05090 PF03116 NQR2, RnfD, RnfE family GO498_05095 PF04205 FMN-binding domain GO498_05100 PF02508 Rnf-Nqr subunit, membrane protein GO498_05105 PF02508 Rnf-Nqr subunit, membrane protein GO498_05110 PF00111 2Fe-2S iron-sulfur cluster binding domain GO498_05110 PF00970 Oxidoreductase FAD-binding domain GO498_05110 PF00175 Oxidoreductase NAD-binding domain GO498_05115 PF02424 ApbE family GO498_05120 PF04400 (Na+)-NQR maturation NqrM GO498_05125 PF05532 CsbD-like GO498_05130 PF03009 Glycerophosphoryl diester phosphodiesterase family GO498_05135 PF11798 IMS family HHH motif GO498_05135 PF11799 impB/mucB/samB family C-terminal domain GO498_05135 PF00817 impB/mucB/samB family GO498_05140 PF07715 TonB-dependent Receptor Plug Domain GO498_05140 PF00593 TonB dependent receptor GO498_05145 PF07687 Peptidase dimerisation domain GO498_05145 PF01546 Peptidase family M20/M25/M40 GO498_05150 PF00156 Phosphoribosyl transferase domain GO498_05160 PF07417 Sigma factor-binding transcriptional regulator Crl GO498_05165 PF00696 Amino acid kinase family GO498_05165 PF01472 PUA domain GO498_05170 PF00171 Aldehyde dehydrogenase family GO498_05175 PF01202 Shikimate kinase GO498_05180 PF13193 AMP-binding enzyme C-terminal domain GO498_05180 PF00501 AMP-binding enzyme GO498_05180 PF01553 Acyltransferase GO498_05185 PF07690 Major Facilitator Superfamily GO498_05190 PF02464 Competence-damaged protein GO498_05195 PF00154 recA bacterial DNA recombination protein GO498_05200 PF01411 tRNA synthetases class II (A) GO498_05200 PF02272 DHHA1 domain GO498_05200 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain GO498_05205 PF02599 Global regulator protein family GO498_05235 PF04262 Glutamate-cysteine ligase GO498_05240 PF02664 S-Ribosylhomocysteinase (LuxS) GO498_05245 PF00571 CBS domain GO498_05245 PF03471 Transporter associated domain GO498_05245 PF01595 Cyclin M transmembrane N-terminal domain GO498_05250 PF01578 Cytochrome C assembly protein GO498_05255 PF00448 SRP54-type protein, GTPase domain GO498_05255 PF02978 Signal peptide binding domain GO498_05255 PF02881 SRP54-type protein, helical bundle domain GO498_05260 PF00886 Ribosomal protein S16 GO498_05265 PF05239 PRC-barrel domain GO498_05265 PF01782 RimM N-terminal domain GO498_05270 PF01746 tRNA (Guanine-1)-methyltransferase GO498_05275 PF01245 Ribosomal protein L19 GO498_05280 PF00793 DAHP synthetase I family GO498_05285 PF01817 Chorismate mutase type II GO498_05285 PF02153 Prephenate dehydrogenase GO498_05290 PF03605 Anaerobic c4-dicarboxylate membrane transporter GO498_05295 PF00800 Prephenate dehydratase GO498_05295 PF01817 Chorismate mutase type II GO498_05300 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein GO498_05305 PF13525 Outer membrane lipoprotein GO498_05310 PF00849 RNA pseudouridylate synthase GO498_05310 PF01479 S4 domain GO498_05320 PF00004 ATPase family associated with various cellular activities (AAA) GO498_05320 PF17871 AAA lid domain GO498_05320 PF02861 Clp amino terminal domain, pathogenicity island component GO498_05320 PF10431 C-terminal, D2-small domain, of ClpB protein GO498_05320 PF07724 AAA domain (Cdc48 subfamily) GO498_05350 PF10043 Predicted periplasmic lipoprotein (DUF2279) GO498_05355 PF13091 PLD-like domain GO498_05360 PF13607 Succinyl-CoA ligase like flavodoxin domain GO498_05360 PF13380 CoA binding domain GO498_05360 PF00583 Acetyltransferase (GNAT) family GO498_05375 PF08032 RNA 2'-O ribose methyltransferase substrate binding GO498_05375 PF00588 SpoU rRNA Methylase family GO498_05380 PF07690 Major Facilitator Superfamily GO498_05385 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GO498_05385 PF00529 HlyD membrane-fusion protein of T1SS GO498_05390 PF00392 Bacterial regulatory proteins, gntR family GO498_05390 PF07729 FCD domain GO498_05395 PF07690 Major Facilitator Superfamily GO498_05400 PF00857 Isochorismatase family GO498_05405 PF01047 MarR family GO498_05410 PF07690 Major Facilitator Superfamily GO498_05415 PF07715 TonB-dependent Receptor Plug Domain GO498_05415 PF00593 TonB dependent receptor GO498_05420 PF04069 Substrate binding domain of ABC-type glycine betaine transport system GO498_05425 PF00528 Binding-protein-dependent transport system inner membrane component GO498_05430 PF00571 CBS domain GO498_05430 PF00005 ABC transporter GO498_05435 PF00268 Ribonucleotide reductase, small chain GO498_05440 PF08343 Ribonucleotide reductase N-terminal GO498_05440 PF00317 Ribonucleotide reductase, all-alpha domain GO498_05440 PF02867 Ribonucleotide reductase, barrel domain GO498_05445 PF07972 NrdI Flavodoxin like GO498_05455 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain GO498_05455 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain GO498_05460 PF00313 'Cold-shock' DNA-binding domain GO498_05470 PF02537 CrcB-like protein, Camphor Resistance (CrcB) GO498_05475 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family GO498_05475 PF04055 Radical SAM superfamily GO498_05485 PF04359 Protein of unknown function (DUF493) GO498_05490 PF07943 Penicillin-binding protein 5, C-terminal domain GO498_05490 PF00768 D-alanyl-D-alanine carboxypeptidase GO498_05495 PF05036 Sporulation related domain GO498_05495 PF03330 Lytic transglycolase GO498_05500 PF01098 Cell cycle protein GO498_05505 PF03717 Penicillin-binding Protein dimerisation domain GO498_05505 PF00905 Penicillin binding protein transpeptidase domain GO498_05510 PF02590 Predicted SPOUT methyltransferase GO498_05525 PF01467 Cytidylyltransferase-like GO498_05530 PF06144 DNA polymerase III, delta subunit GO498_05530 PF14840 Processivity clamp loader gamma complex DNA pol III C-term GO498_05535 PF04390 Lipopolysaccharide-assembly GO498_05540 PF08264 Anticodon-binding domain of tRNA GO498_05540 PF13603 Leucyl-tRNA synthetase, Domain 2 GO498_05540 PF00133 tRNA synthetases class I (I, L, M and V) GO498_05545 PF00005 ABC transporter GO498_05550 PF00528 Binding-protein-dependent transport system inner membrane component GO498_05555 PF00528 Binding-protein-dependent transport system inner membrane component GO498_05560 PF00497 Bacterial extracellular solute-binding proteins, family 3 GO498_05580 PF00578 AhpC/TSA family GO498_05590 PF00795 Carbon-nitrogen hydrolase GO498_05595 PF00571 CBS domain GO498_05595 PF03471 Transporter associated domain GO498_05600 PF02130 Uncharacterized protein family UPF0054 GO498_05605 PF02562 PhoH-like protein GO498_05610 PF04055 Radical SAM superfamily GO498_05610 PF01938 TRAM domain GO498_05610 PF00919 Uncharacterized protein family UPF0004 GO498_05615 PF01494 FAD binding domain GO498_05620 PF00756 Putative esterase GO498_05625 PF08240 Alcohol dehydrogenase GroES-like domain GO498_05625 PF00107 Zinc-binding dehydrogenase GO498_05630 PF02583 Metal-sensitive transcriptional repressor GO498_05670 PF01047 MarR family GO498_05670 PF00480 ROK family GO498_05675 PF01979 Amidohydrolase family GO498_05680 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase GO498_05685 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 GO498_05685 PF00367 phosphotransferase system, EIIB GO498_05685 PF02378 Phosphotransferase system, EIIC GO498_05690 PF09003 Bacteriophage lambda integrase, Arm DNA-binding domain GO498_05690 PF00589 Phage integrase family GO498_05715 PF00436 Single-strand binding protein family GO498_05780 PF00772 DnaB-like helicase N terminal domain GO498_05780 PF03796 DnaB-like helicase C terminal domain GO498_05795 PF07102 Protein of unknown function (DUF1364) GO498_05810 PF07274 Protein of unknown function (DUF1440) GO498_05825 PF00959 Phage lysozyme GO498_06005 PF13953 PapC C-terminal domain GO498_06005 PF13954 PapC N-terminal domain GO498_06005 PF00577 Outer membrane usher protein GO498_06010 PF02753 Pili assembly chaperone PapD, C-terminal domain GO498_06010 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain GO498_06015 PF16970 Type-1 fimbrial protein, A GO498_06020 PF06440 DNA polymerase III, theta subunit GO498_06025 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain GO498_06025 PF00749 tRNA synthetases class I (E and Q), catalytic domain GO498_06030 PF03573 outer membrane porin, OprD family GO498_06040 PF01475 Ferric uptake regulator family GO498_06045 PF00258 Flavodoxin GO498_06050 PF01402 Ribbon-helix-helix protein, copG family GO498_06055 PF12697 Alpha/beta hydrolase family GO498_06060 PF03925 SeqA protein C-terminal domain GO498_06060 PF17206 SeqA protein N-terminal domain GO498_06065 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III GO498_06065 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II GO498_06065 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I GO498_06065 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain GO498_06070 PF07308 Protein of unknown function (DUF1456) GO498_06075 PF06296 RelE toxin of RelE / RelB toxin-antitoxin system GO498_06085 PF10725 Protein of unknown function (DUF2517) GO498_06090 PF01784 NIF3 (NGG1p interacting factor 3) GO498_06100 PF05762 VWA domain containing CoxE-like protein GO498_06110 PF07728 AAA domain (dynein-related subfamily) GO498_06120 PF07690 Major Facilitator Superfamily GO498_06130 PF00285 Citrate synthase, C-terminal domain GO498_06135 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit GO498_06140 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit GO498_06145 PF02910 Fumarate reductase flavoprotein C-term GO498_06145 PF00890 FAD binding domain GO498_06150 PF13085 2Fe-2S iron-sulfur cluster binding domain GO498_06155 PF00676 Dehydrogenase E1 component GO498_06155 PF16078 2-oxoglutarate dehydrogenase N-terminus GO498_06155 PF02779 Transketolase, pyrimidine binding domain GO498_06155 PF16870 2-oxoglutarate dehydrogenase C-terminal GO498_06160 PF02817 e3 binding domain GO498_06160 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) GO498_06160 PF00364 Biotin-requiring enzyme GO498_06165 PF00549 CoA-ligase GO498_06165 PF08442 ATP-grasp domain GO498_06170 PF02629 CoA binding domain GO498_06170 PF00549 CoA-ligase GO498_06175 PF01654 Cytochrome bd terminal oxidase subunit I GO498_06180 PF02322 Cytochrome bd terminal oxidase subunit II GO498_06185 PF08173 Membrane bound YbgT-like protein GO498_06190 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) GO498_06195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GO498_06195 PF03466 LysR substrate binding domain GO498_06200 PF07690 Major Facilitator Superfamily GO498_06210 PF03061 Thioesterase superfamily GO498_06215 PF01618 MotA/TolQ/ExbB proton channel family GO498_06220 PF02472 Biopolymer transport protein ExbD/TolR GO498_06225 PF06519 TolA C-terminal GO498_06230 PF07676 WD40-like Beta Propeller Repeat GO498_06230 PF04052 TolB amino-terminal domain GO498_06235 PF00691 OmpA family GO498_06240 PF13174 Tetratricopeptide repeat GO498_06240 PF16331 TolA binding protein trimerisation GO498_06260 PF04973 Nicotinamide mononucleotide transporter GO498_06265 PF00793 DAHP synthetase I family GO498_06270 PF00300 Histidine phosphatase superfamily (branch 1) GO498_06275 PF00005 ABC transporter GO498_06280 PF17287 POTRA domain GO498_06280 PF08479 POTRA domain, ShlB-type GO498_06280 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB GO498_06310 PF03459 TOBE domain GO498_06310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GO498_06315 PF10766 Multidrug efflux pump-associated protein AcrZ GO498_06325 PF00528 Binding-protein-dependent transport system inner membrane component GO498_06330 PF03459 TOBE domain GO498_06330 PF00005 ABC transporter GO498_06340 PF10282 Lactonase, 7-bladed beta-propeller GO498_06345 PF00202 Aminotransferase class-III GO498_06350 PF04055 Radical SAM superfamily GO498_06350 PF06968 Biotin and Thiamin Synthesis associated domain GO498_06355 PF00155 Aminotransferase class I and II GO498_06360 PF08241 Methyltransferase domain GO498_06370 PF12344 Ultra-violet resistance protein B GO498_06370 PF00271 Helicase conserved C-terminal domain GO498_06370 PF04851 Type III restriction enzyme, res subunit GO498_06370 PF02151 UvrB/uvrC motif GO498_06370 PF17757 UvrB interaction domain GO498_06385 PF04055 Radical SAM superfamily GO498_06385 PF06463 Molybdenum Cofactor Synthesis C GO498_06390 PF01967 MoaC family GO498_06395 PF02597 ThiS family GO498_06400 PF02391 MoaE protein GO498_06405 PF01027 Inhibitor of apoptosis-promoting Bax1 GO498_06420 PF00005 ABC transporter GO498_06425 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GO498_06430 PF09209 Tetracyclin repressor-like, C-terminal domain GO498_06430 PF00440 Bacterial regulatory proteins, tetR family GO498_06435 PF00271 Helicase conserved C-terminal domain GO498_06435 PF00270 DEAD/DEAH box helicase GO498_06440 PF01207 Dihydrouridine synthase (Dus) GO498_06445 PF04226 Transglycosylase associated protein GO498_06450 PF00581 Rhodanese-like domain GO498_06460 PF03606 C4-dicarboxylate anaerobic carrier GO498_06465 PF01053 Cys/Met metabolism PLP-dependent enzyme GO498_06470 PF10397 Adenylosuccinate lyase C-terminus GO498_06470 PF00206 Lyase GO498_06475 PF03972 MmgE/PrpD family GO498_06480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GO498_06480 PF03466 LysR substrate binding domain GO498_06485 PF13307 Helicase C-terminal domain GO498_06485 PF06733 DEAD_2 GO498_06490 PF00210 Ferritin-like domain GO498_06495 PF00892 EamA-like transporter family GO498_06500 PF03641 Possible lysine decarboxylase GO498_06510 PF07969 Amidohydrolase family GO498_06515 PF00899 ThiF family GO498_06520 PF03454 MoeA C-terminal region (domain IV) GO498_06520 PF00994 Probable molybdopterin binding domain GO498_06520 PF03453 MoeA N-terminal region (domain I and II) GO498_06525 PF06779 Uncharacterised MFS-type transporter YbfB GO498_06530 PF01227 GTP cyclohydrolase I GO498_06535 PF04235 Protein of unknown function (DUF418) GO498_06540 PF02698 DUF218 domain GO498_06545 PF03949 Malic enzyme, NAD binding domain GO498_06545 PF00390 Malic enzyme, N-terminal domain GO498_06550 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region GO498_06550 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region GO498_06555 PF04172 LrgB-like family GO498_06560 PF03788 LrgA family GO498_06565 PF09334 tRNA synthetases class I (M) GO498_06565 PF01588 Putative tRNA binding domain GO498_06570 PF10609 NUBPL iron-transfer P-loop NTPase GO498_06575 PF00485 Phosphoribulokinase / Uridine kinase family GO498_06580 PF00692 dUTPase GO498_06585 PF05170 AsmA family GO498_06590 PF03606 C4-dicarboxylate anaerobic carrier GO498_06595 PF03741 Integral membrane protein TerC family GO498_06595 PF03471 Transporter associated domain GO498_06595 PF00571 CBS domain GO498_06600 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain GO498_06600 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase GO498_06605 PF04073 Aminoacyl-tRNA editing domain GO498_06610 PF00465 Iron-containing alcohol dehydrogenase GO498_06615 PF01502 Phosphoribosyl-AMP cyclohydrolase GO498_06615 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase GO498_06620 PF00977 Histidine biosynthesis protein GO498_06625 PF00977 Histidine biosynthesis protein GO498_06630 PF00117 Glutamine amidotransferase class-I GO498_06635 PF00475 Imidazoleglycerol-phosphate dehydratase GO498_06640 PF00155 Aminotransferase class I and II GO498_06645 PF00815 Histidinol dehydrogenase GO498_06650 PF08029 HisG, C-terminal domain GO498_06650 PF01634 ATP phosphoribosyltransferase GO498_06655 PF01370 NAD dependent epimerase/dehydratase family GO498_06660 PF13417 Glutathione S-transferase, N-terminal domain GO498_06660 PF00043 Glutathione S-transferase, C-terminal domain GO498_06665 PF07943 Penicillin-binding protein 5, C-terminal domain GO498_06665 PF00768 D-alanyl-D-alanine carboxypeptidase GO498_06670 PF01268 Formate--tetrahydrofolate ligase GO498_06675 PF03313 Serine dehydratase alpha chain GO498_06675 PF03315 Serine dehydratase beta chain GO498_06685 PF01569 PAP2 superfamily GO498_06690 PF01894 Uncharacterised protein family UPF0047 GO498_06695 PF00462 Glutaredoxin GO498_06700 PF07214 Protein of unknown function (DUF1418) GO498_06705 PF10722 Putative bacterial sensory transduction regulator GO498_06710 PF05958 tRNA (Uracil-5-)-methyltransferase GO498_06715 PF00528 Binding-protein-dependent transport system inner membrane component GO498_06720 PF00528 Binding-protein-dependent transport system inner membrane component GO498_06725 PF00497 Bacterial extracellular solute-binding proteins, family 3 GO498_06730 PF00005 ABC transporter GO498_06735 PF11066 Protein of unknown function (DUF2867) GO498_06735 PF13460 NAD(P)H-binding GO498_06740 PF03956 Lysine exporter LysO GO498_06745 PF11398 Protein of unknown function (DUF2813) GO498_06750 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GO498_06755 PF02687 FtsX-like permease family GO498_06755 PF00005 ABC transporter GO498_06755 PF12704 MacB-like periplasmic core domain GO498_06760 PF00313 'Cold-shock' DNA-binding domain GO498_06765 PF02617 ATP-dependent Clp protease adaptor protein ClpS GO498_06770 PF07724 AAA domain (Cdc48 subfamily) GO498_06770 PF17871 AAA lid domain GO498_06770 PF02861 Clp amino terminal domain, pathogenicity island component GO498_06770 PF00004 ATPase family associated with various cellular activities (AAA) GO498_06770 PF10431 C-terminal, D2-small domain, of ClpB protein GO498_06775 PF01176 Translation initiation factor 1A / IF-1 GO498_06780 PF03588 Leucyl/phenylalanyl-tRNA protein transferase GO498_06785 PF00005 ABC transporter GO498_06785 PF00664 ABC transporter transmembrane region GO498_06790 PF00664 ABC transporter transmembrane region GO498_06790 PF00005 ABC transporter GO498_06795 PF07992 Pyridine nucleotide-disulphide oxidoreductase GO498_06800 PF01037 Lrp/AsnC ligand binding domain GO498_06805 PF13491 4TM region of DNA translocase FtsK/SpoIIIE GO498_06805 PF17854 FtsK alpha domain GO498_06805 PF09397 Ftsk gamma domain GO498_06805 PF01580 FtsK/SpoIIIE family GO498_06810 PF03548 Outer membrane lipoprotein carrier protein LolA GO498_06815 PF00004 ATPase family associated with various cellular activities (AAA) GO498_06815 PF16193 AAA C-terminal domain GO498_06815 PF12002 MgsA AAA+ ATPase C terminal GO498_06820 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) GO498_06820 PF02403 Seryl-tRNA synthetase N-terminal domain GO498_06830 PF02615 Malate/L-lactate dehydrogenase GO498_06840 PF04055 Radical SAM superfamily GO498_06845 PF01228 Glycine radical GO498_06845 PF02901 Pyruvate formate lyase-like GO498_06850 PF01226 Formate/nitrite transporter GO498_06855 PF18381 YcaO cyclodehydratase C-terminal domain GO498_06855 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding GO498_06860 PF00710 Asparaginase, N-terminal GO498_06860 PF17763 Glutaminase/Asparaginase C-terminal domain GO498_06865 PF13332 Hemagglutinin repeat GO498_06865 PF05594 Haemagluttinin repeat GO498_06865 PF15526 Novel toxin 21 GO498_06865 PF04829 Pre-toxin domain with VENN motif GO498_06865 PF05860 haemagglutination activity domain GO498_06870 PF07690 Major Facilitator Superfamily GO498_06875 PF00266 Aminotransferase class-V GO498_06880 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) GO498_06885 PF02224 Cytidylate kinase GO498_06890 PF00575 S1 RNA binding domain GO498_06895 PF00216 Bacterial DNA-binding protein GO498_06900 PF03772 Competence protein GO498_06900 PF00753 Metallo-beta-lactamase superfamily GO498_06905 PF00005 ABC transporter GO498_06905 PF00664 ABC transporter transmembrane region GO498_06910 PF02606 Tetraacyldisaccharide-1-P 4'-kinase GO498_06915 PF00313 'Cold-shock' DNA-binding domain GO498_06920 PF03966 Trm112p-like protein GO498_06925 PF02348 Cytidylyltransferase GO498_06930 PF02698 DUF218 domain GO498_06940 PF17192 MukF middle domain GO498_06940 PF17193 MukF C-terminal domain GO498_06940 PF03882 MukF winged-helix domain GO498_06945 PF04288 MukE-like family GO498_06950 PF04310 MukB N-terminal GO498_06950 PF16330 MukB hinge domain GO498_06955 PF00302 Chloramphenicol acetyltransferase GO498_06960 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) GO498_06965 PF03734 L,D-transpeptidase catalytic domain GO498_06965 PF01471 Putative peptidoglycan binding domain GO498_06970 PF05951 Bacterial protein of unknown function (DUF882) GO498_06975 PF00753 Metallo-beta-lactamase superfamily GO498_06980 PF05638 Type VI secretion system effector, Hcp GO498_07015 PF10431 C-terminal, D2-small domain, of ClpB protein GO498_07015 PF17871 AAA lid domain GO498_07015 PF07724 AAA domain (Cdc48 subfamily) GO498_07015 PF00004 ATPase family associated with various cellular activities (AAA) GO498_07065 PF05638 Type VI secretion system effector, Hcp GO498_07070 PF04717 Type VI secretion system, phage-baseplate injector GO498_07170 PF00155 Aminotransferase class I and II GO498_07175 PF00267 Gram-negative porin GO498_07180 PF00152 tRNA synthetases class II (D, K and N) GO498_07180 PF01336 OB-fold nucleic acid binding domain GO498_07190 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain GO498_07190 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family GO498_07195 PF01433 Peptidase family M1 domain GO498_07195 PF17432 Domain of unknown function (DUF3458_C) ARM repeats GO498_07195 PF11940 Domain of unknown function (DUF3458) Ig-like fold GO498_07205 PF01180 Dihydroorotate dehydrogenase GO498_07210 PF07126 Cell-division protein ZapC GO498_07215 PF03476 MOSC N-terminal beta barrel domain GO498_07215 PF03473 MOSC domain GO498_07215 PF00111 2Fe-2S iron-sulfur cluster binding domain GO498_07220 PF02926 THUMP domain GO498_07220 PF10672 S-adenosylmethionine-dependent methyltransferase GO498_07220 PF01170 Putative RNA methylase family UPF0020 GO498_07225 PF00005 ABC transporter GO498_07225 PF16326 ABC transporter C-terminal domain GO498_07225 PF12848 ABC transporter GO498_07230 PF04403 Paraquat-inducible protein A GO498_07235 PF02470 MlaD protein GO498_07240 PF03886 ABC-type transport auxiliary lipoprotein component GO498_07250 PF04957 Ribosome modulation factor GO498_07255 PF07977 FabA-like domain GO498_07260 PF13654 AAA domain GO498_07260 PF05362 Lon protease (S16) C-terminal proteolytic domain GO498_07265 PF06303 MatP N-terminal domain GO498_07265 PF17414 MatP C-terminal ribbon-helix-helix domain GO498_07270 PF01389 OmpA-like transmembrane domain GO498_07270 PF00691 OmpA family GO498_07275 PF03846 Cell division inhibitor SulA GO498_07280 PF04993 TfoX N-terminal domain GO498_07280 PF04994 TfoX C-terminal domain GO498_07285 PF12805 FUSC-like inner membrane protein yccS GO498_07290 PF12462 DNA helicase IV / RNA helicase N terminal GO498_07290 PF13361 UvrD-like helicase C-terminal domain GO498_07290 PF00580 UvrD/REP helicase N-terminal domain GO498_07295 PF02142 MGS-like domain GO498_07300 PF13380 CoA binding domain GO498_07305 PF08755 Hemimethylated DNA-binding protein YccV like GO498_07310 PF00708 Acylphosphatase GO498_07315 PF04358 DsrC like protein GO498_07335 PF09313 Domain of unknown function (DUF1971) GO498_07340 PF00226 DnaJ domain GO498_07340 PF01556 DnaJ C terminal domain GO498_07350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GO498_07350 PF03466 LysR substrate binding domain GO498_07355 PF00248 Aldo/keto reductase family GO498_07360 PF03577 Peptidase family C69 GO498_07365 PF06445 GyrI-like small molecule binding domain GO498_07365 PF12833 Helix-turn-helix domain GO498_07380 PF00313 'Cold-shock' DNA-binding domain GO498_07385 PF03279 Bacterial lipid A biosynthesis acyltransferase GO498_07400 PF13847 Methyltransferase domain GO498_07415 PF01810 LysE type translocator GO498_07490 PF13439 Glycosyltransferase Family 4 GO498_07490 PF00534 Glycosyl transferases group 1 GO498_07505 PF11893 Domain of unknown function (DUF3413) GO498_07505 PF00884 Sulfatase GO498_07510 PF07208 Protein of unknown function (DUF1414) GO498_07515 PF04245 37-kD nucleoid-associated bacterial protein GO498_07520 PF01386 Ribosomal L25p family GO498_07525 PF00271 Helicase conserved C-terminal domain GO498_07525 PF04851 Type III restriction enzyme, res subunit GO498_07530 PF01479 S4 domain GO498_07530 PF00849 RNA pseudouridylate synthase GO498_07535 PF07690 Major Facilitator Superfamily GO498_07545 PF00877 NlpC/P60 family GO498_07550 PF01569 PAP2 superfamily GO498_07565 PF09285 Elongation factor P, C-terminal GO498_07565 PF01132 Elongation factor P (EF-P) OB domain GO498_07565 PF08207 Elongation factor P (EF-P) KOW-like domain GO498_07570 PF03222 Tryptophan/tyrosine permease family GO498_07575 PF00293 NUDIX domain GO498_07580 PF01261 Xylose isomerase-like TIM barrel GO498_07585 PF03601 Conserved hypothetical protein 698 GO498_07590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GO498_07590 PF03466 LysR substrate binding domain GO498_07595 PF00324 Amino acid permease GO498_07600 PF07715 TonB-dependent Receptor Plug Domain GO498_07600 PF00593 TonB dependent receptor GO498_07610 PF13520 Amino acid permease GO498_07615 PF12951 Passenger-associated-transport-repeat GO498_07615 PF03797 Autotransporter beta-domain GO498_07615 PF00082 Subtilase family GO498_07620 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain GO498_07620 PF00205 Thiamine pyrophosphate enzyme, central domain GO498_07620 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain GO498_07625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GO498_07625 PF03466 LysR substrate binding domain GO498_07630 PF09330 D-lactate dehydrogenase, membrane binding GO498_07630 PF01565 FAD binding domain GO498_07640 PF00929 Exonuclease GO498_07640 PF08411 Exonuclease C-terminal GO498_07645 PF01306 LacY proton/sugar symporter GO498_07650 PF04363 Protein of unknown function (DUF496) GO498_07655 PF00575 S1 RNA binding domain GO498_07655 PF10150 Ribonuclease E/G family GO498_07655 PF12111 Polyribonucleotide phosphorylase C terminal GO498_07660 PF01479 S4 domain GO498_07660 PF00849 RNA pseudouridylate synthase GO498_07670 PF02545 Maf-like protein GO498_07675 PF02620 Large ribosomal RNA subunit accumulation protein YceD GO498_07680 PF01783 Ribosomal L32p protein family GO498_07685 PF02504 Fatty acid synthesis protein GO498_07690 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal GO498_07690 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO498_07695 PF00698 Acyl transferase domain GO498_07705 PF00550 Phosphopantetheine attachment site GO498_07710 PF00109 Beta-ketoacyl synthase, N-terminal domain GO498_07710 PF02801 Beta-ketoacyl synthase, C-terminal domain GO498_07715 PF01063 Amino-transferase class IV GO498_07720 PF02618 YceG-like family GO498_07725 PF02223 Thymidylate kinase GO498_07730 PF09115 DNA polymerase III, delta subunit, C terminal GO498_07735 PF01026 TatD related DNase GO498_07740 PF01230 HIT domain GO498_07745 PF07233 Protein of unknown function (DUF1425) GO498_07750 PF13036 Peptidoglycan-synthase activator LpoB GO498_07760 PF00933 Glycosyl hydrolase family 3 N terminal domain GO498_07765 PF05728 Uncharacterised protein family (UPF0227) GO498_07770 PF07992 Pyridine nucleotide-disulphide oxidoreductase GO498_07775 PF05433 Glycine zipper 2TM domain GO498_07780 PF03461 TRCF domain GO498_07780 PF00270 DEAD/DEAH box helicase GO498_07780 PF00271 Helicase conserved C-terminal domain GO498_07780 PF02559 CarD-like/TRCF domain GO498_07780 PF17757 UvrB interaction domain GO498_07785 PF02687 FtsX-like permease family GO498_07785 PF12704 MacB-like periplasmic core domain GO498_07790 PF00005 ABC transporter GO498_07795 PF02687 FtsX-like permease family GO498_07795 PF12704 MacB-like periplasmic core domain GO498_07800 PF02146 Sir2 family GO498_07805 PF07687 Peptidase dimerisation domain GO498_07805 PF01546 Peptidase family M20/M25/M40 GO498_07815 PF08007 Cupin superfamily protein GO498_07820 PF08918 PhoQ Sensor GO498_07820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GO498_07825 PF00072 Response regulator receiver domain GO498_07825 PF00486 Transcriptional regulatory protein, C terminal GO498_07830 PF08328 Adenylosuccinate lyase C-terminal GO498_07830 PF00206 Lyase GO498_07835 PF04356 Protein of unknown function (DUF489) GO498_07845 PF00293 NUDIX domain GO498_07850 PF00849 RNA pseudouridylate synthase GO498_07855 PF00180 Isocitrate/isopropylmalate dehydrogenase GO498_07895 PF00180 Isocitrate/isopropylmalate dehydrogenase GO498_07905 PF01966 HD domain GO498_07910 PF00180 Isocitrate/isopropylmalate dehydrogenase GO498_07925 PF00313 'Cold-shock' DNA-binding domain GO498_07930 PF00011 Hsp20/alpha crystallin family GO498_07940 PF01638 HxlR-like helix-turn-helix GO498_07945 PF05368 NmrA-like family GO498_07955 PF00485 Phosphoribulokinase / Uridine kinase family GO498_07970 PF02195 ParB-like nuclease domain GO498_07975 PF01507 Phosphoadenosine phosphosulfate reductase family GO498_07975 PF11922 Domain of unknown function (DUF3440) GO498_07980 PF08242 Methyltransferase domain GO498_07990 PF08349 Protein of unknown function (DUF1722) GO498_07995 PF04325 Protein of unknown function (DUF465) GO498_08025 PF00557 Metallopeptidase family M24 GO498_08030 PF06530 Phage antitermination protein Q GO498_08035 PF00561 alpha/beta hydrolase fold GO498_08040 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system GO498_08045 PF01797 Transposase IS200 like GO498_08050 PF01385 Probable transposase GO498_08050 PF12323 Helix-turn-helix domain GO498_08050 PF07282 Putative transposase DNA-binding domain GO498_08055 PF02811 PHP domain GO498_08070 PF00582 Universal stress protein family GO498_08075 PF00210 Ferritin-like domain GO498_08080 PF04234 CopC domain GO498_08085 PF05425 Copper resistance protein D GO498_08090 PF10709 Protein of unknown function (DUF2511) GO498_08100 PF02470 MlaD protein GO498_08105 PF04403 Paraquat-inducible protein A GO498_08110 PF13185 GAF domain GO498_08115 PF17516 ProQ C-terminal domain GO498_08115 PF04352 ProQ/FINO family GO498_08120 PF03572 Peptidase family S41 GO498_08120 PF17804 Tail specific protease N-terminal domain GO498_08120 PF00595 PDZ domain GO498_08120 PF11818 C-terminal domain of tail specific protease (DUF3340) GO498_08130 PF01435 Peptidase family M48 GO498_08140 PF04307 LexA-binding, inner membrane-associated putative hydrolase GO498_08145 PF13419 Haloacid dehalogenase-like hydrolase GO498_08150 PF14002 YniB-like protein GO498_08160 PF00950 ABC 3 transport family GO498_08165 PF00950 ABC 3 transport family GO498_08170 PF00005 ABC transporter GO498_08175 PF01297 Zinc-uptake complex component A periplasmic GO498_08180 PF01464 Transglycosylase SLT domain GO498_08185 PF01914 MarC family integral membrane protein GO498_08195 PF01588 Putative tRNA binding domain GO498_08205 PF09160 FimH, mannose binding GO498_08210 PF03129 Anticodon binding domain GO498_08210 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain GO498_08210 PF02824 TGS domain GO498_08210 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) GO498_08215 PF00707 Translation initiation factor IF-3, C-terminal domain GO498_08215 PF05198 Translation initiation factor IF-3, N-terminal domain GO498_08220 PF01632 Ribosomal protein L35 GO498_08225 PF00453 Ribosomal protein L20 GO498_08235 PF01409 tRNA synthetases class II core domain (F) GO498_08235 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain GO498_08240 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain GO498_08240 PF03147 Ferredoxin-fold anticodon binding domain GO498_08240 PF03483 B3/4 domain GO498_08240 PF03484 tRNA synthetase B5 domain GO498_08240 PF01588 Putative tRNA binding domain GO498_08245 PF00216 Bacterial DNA-binding protein GO498_08250 PF01032 FecCD transport family GO498_08255 PF00005 ABC transporter GO498_08260 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family GO498_08265 PF00535 Glycosyl transferase family 2 GO498_08270 PF02911 Formyl transferase, C-terminal domain GO498_08270 PF00551 Formyl transferase GO498_08270 PF01370 NAD dependent epimerase/dehydratase family GO498_08275 PF01522 Polysaccharide deacetylase GO498_08280 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase GO498_08285 PF00892 EamA-like transporter family GO498_08290 PF00892 EamA-like transporter family GO498_08295 PF00877 NlpC/P60 family GO498_08300 PF03099 Biotin/lipoate A/B protein ligase family GO498_08300 PF10437 Bacterial lipoate protein ligase C-terminus GO498_08305 PF12833 Helix-turn-helix domain GO498_08310 PF01266 FAD dependent oxidoreductase GO498_08315 PF00392 Bacterial regulatory proteins, gntR family GO498_08315 PF07729 FCD domain GO498_08330 PF09335 SNARE associated Golgi protein GO498_08335 PF00205 Thiamine pyrophosphate enzyme, central domain GO498_08335 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain GO498_08335 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain GO498_08340 PF03306 Alpha-acetolactate decarboxylase GO498_08355 PF13954 PapC N-terminal domain GO498_08355 PF00577 Outer membrane usher protein GO498_08360 PF02753 Pili assembly chaperone PapD, C-terminal domain GO498_08360 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain GO498_08390 PF01926 50S ribosome-binding GTPase GO498_08390 PF06071 Protein of unknown function (DUF933) GO498_08395 PF01195 Peptidyl-tRNA hydrolase GO498_08400 PF10762 Protein of unknown function (DUF2583) GO498_08405 PF14572 Phosphoribosyl synthetase-associated domain GO498_08405 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase GO498_08410 PF08544 GHMP kinases C terminal GO498_08410 PF00288 GHMP kinases N terminal domain GO498_08415 PF03550 Outer membrane lipoprotein LolB GO498_08420 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain GO498_08420 PF01488 Shikimate / quinate 5-dehydrogenase GO498_08420 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain GO498_08425 PF03462 PCRF domain GO498_08425 PF00472 RF-1 domain GO498_08430 PF13847 Methyltransferase domain GO498_08430 PF17827 PrmC N-terminal domain GO498_08435 PF13369 Transglutaminase-like superfamily GO498_08440 PF00793 DAHP synthetase I family GO498_08445 PF04055 Radical SAM superfamily GO498_08445 PF16199 Radical_SAM C-terminal domain GO498_08455 PF01740 STAS domain GO498_08455 PF00916 Sulfate permease family GO498_08465 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GO498_08480 PF02613 Nitrate reductase delta subunit GO498_08490 PF07690 Major Facilitator Superfamily GO498_08495 PF13302 Acetyltransferase (GNAT) domain GO498_08500 PF03023 Lipid II flippase MurJ GO498_08510 PF03485 Arginyl tRNA synthetase N terminal domain GO498_08510 PF00750 tRNA synthetases class I (R) GO498_08510 PF05746 DALR anticodon binding domain GO498_08515 PF06185 YecM protein GO498_08520 PF03932 CutC family GO498_08530 PF12848 ABC transporter GO498_08530 PF00005 ABC transporter GO498_08530 PF16326 ABC transporter C-terminal domain GO498_08535 PF08003 Protein of unknown function (DUF1698) GO498_08540 PF13649 Methyltransferase domain GO498_08545 PF01124 MAPEG family GO498_08550 PF01336 OB-fold nucleic acid binding domain GO498_08550 PF02938 GAD domain GO498_08550 PF00152 tRNA synthetases class II (D, K and N) GO498_08555 PF00293 NUDIX domain GO498_08560 PF01709 Transcriptional regulator GO498_08565 PF02075 Crossover junction endodeoxyribonuclease RuvC GO498_08570 PF01330 RuvA N terminal domain GO498_08570 PF07499 RuvA, C-terminal domain GO498_08575 PF05496 Holliday junction DNA helicase RuvB P-loop domain GO498_08575 PF05491 RuvB C-terminal winged helix domain GO498_08575 PF17864 RuvB AAA lid domain GO498_08580 PF05638 Type VI secretion system effector, Hcp GO498_08585 PF04717 Type VI secretion system, phage-baseplate injector GO498_08595 PF03527 RHS protein GO498_08595 PF05593 RHS Repeat GO498_08620 PF03527 RHS protein GO498_08620 PF05593 RHS Repeat GO498_08645 PF00950 ABC 3 transport family GO498_08650 PF00005 ABC transporter GO498_08655 PF01297 Zinc-uptake complex component A periplasmic GO498_08660 PF01476 LysM domain GO498_08660 PF08525 Opacity-associated protein A N-terminal motif GO498_08660 PF01551 Peptidase family M23 GO498_08665 PF03279 Bacterial lipid A biosynthesis acyltransferase GO498_08670 PF00224 Pyruvate kinase, barrel domain GO498_08670 PF02887 Pyruvate kinase, alpha/beta domain GO498_08675 PF01380 SIS domain GO498_08675 PF01418 Helix-turn-helix domain, rpiR family GO498_08680 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain GO498_08680 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain GO498_08685 PF00893 Small Multidrug Resistance protein GO498_08690 PF00893 Small Multidrug Resistance protein GO498_08695 PF11066 Protein of unknown function (DUF2867) GO498_08695 PF13460 NAD(P)H-binding GO498_08700 PF01042 Endoribonuclease L-PSP GO498_08705 PF04851 Type III restriction enzyme, res subunit GO498_08705 PF13307 Helicase C-terminal domain GO498_08710 PF00814 Glycoprotease family GO498_08715 PF03843 Outer membrane lipoprotein Slp family GO498_08720 PF00501 AMP-binding enzyme GO498_08720 PF13193 AMP-binding enzyme C-terminal domain GO498_08725 PF01612 3'-5' exonuclease GO498_08725 PF00570 HRDC domain GO498_08730 PF03776 Septum formation topological specificity factor MinE GO498_08735 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain GO498_08740 PF03775 Septum formation inhibitor MinC, C-terminal domain GO498_08740 PF05209 Septum formation inhibitor MinC, N-terminal domain GO498_08745 PF05166 YcgL domain GO498_08750 PF13406 Transglycosylase SLT domain GO498_08755 PF01557 Fumarylacetoacetate (FAA) hydrolase family GO498_08760 PF03692 Putative zinc- or iron-chelating domain GO498_08765 PF03649 Uncharacterised protein family (UPF0014) GO498_08770 PF00005 ABC transporter GO498_08780 PF06445 GyrI-like small molecule binding domain GO498_08780 PF12833 Helix-turn-helix domain GO498_08785 PF00440 Bacterial regulatory proteins, tetR family GO498_08790 PF00672 HAMP domain GO498_08790 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GO498_08790 PF02203 Tar ligand binding domain homologue GO498_08795 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO498_08795 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GO498_08800 PF11739 Dicarboxylate transport GO498_08805 PF13617 YnbE-like lipoprotein GO498_08810 PF07027 Protein of unknown function (DUF1318) GO498_08820 PF00577 Outer membrane usher protein GO498_08820 PF13954 PapC N-terminal domain GO498_08820 PF13953 PapC C-terminal domain GO498_08835 PF02525 Flavodoxin-like fold GO498_08840 PF00270 DEAD/DEAH box helicase GO498_08840 PF00271 Helicase conserved C-terminal domain GO498_08840 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold GO498_08840 PF11898 Domain of unknown function (DUF3418) GO498_08840 PF04408 Helicase associated domain (HA2) GO498_08855 PF13953 PapC C-terminal domain GO498_08855 PF13954 PapC N-terminal domain GO498_08855 PF00577 Outer membrane usher protein GO498_08860 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain GO498_08860 PF02753 Pili assembly chaperone PapD, C-terminal domain GO498_08870 PF13520 Amino acid permease GO498_08875 PF07338 Protein of unknown function (DUF1471) GO498_08880 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch GO498_08880 PF01262 Alanine dehydrogenase/PNT, C-terminal domain GO498_08880 PF05222 Alanine dehydrogenase/PNT, N-terminal domain GO498_08885 PF02233 NAD(P) transhydrogenase beta subunit GO498_08890 PF00582 Universal stress protein family GO498_08895 PF00325 Bacterial regulatory proteins, crp family GO498_08895 PF00027 Cyclic nucleotide-binding domain GO498_08900 PF04879 Molybdopterin oxidoreductase Fe4S4 domain GO498_08900 PF01568 Molydopterin dinucleotide binding domain GO498_08900 PF00384 Molybdopterin oxidoreductase GO498_08905 PF12800 4Fe-4S binding domain GO498_08905 PF13247 4Fe-4S dicluster domain GO498_08920 PF00698 Acyl transferase domain GO498_08920 PF16197 Ketoacyl-synthetase C-terminal extension GO498_08920 PF08240 Alcohol dehydrogenase GroES-like domain GO498_08920 PF00550 Phosphopantetheine attachment site GO498_08920 PF08659 KR domain GO498_08920 PF02801 Beta-ketoacyl synthase, C-terminal domain GO498_08920 PF00109 Beta-ketoacyl synthase, N-terminal domain GO498_08920 PF14765 Polyketide synthase dehydratase GO498_08930 PF03551 Transcriptional regulator PadR-like family GO498_08940 PF10417 C-terminal domain of 1-Cys peroxiredoxin GO498_08940 PF00578 AhpC/TSA family GO498_08945 PF13192 Thioredoxin domain GO498_08945 PF07992 Pyridine nucleotide-disulphide oxidoreductase GO498_09045 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus GO498_09045 PF01048 Phosphorylase superfamily GO498_09050 PF00589 Phage integrase family GO498_09050 PF02899 Phage integrase, N-terminal SAM-like domain GO498_09055 PF01112 Asparaginase GO498_09060 PF13533 Biotin-lipoyl like GO498_09065 PF00005 ABC transporter GO498_09075 PF00486 Transcriptional regulatory protein, C terminal GO498_09075 PF00072 Response regulator receiver domain GO498_09080 PF13492 GAF domain GO498_09080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GO498_09080 PF13493 Domain of unknown function (DUF4118) GO498_09080 PF02702 Osmosensitive K+ channel His kinase sensor domain GO498_09080 PF00512 His Kinase A (phospho-acceptor) domain GO498_09085 PF02669 K+-transporting ATPase, c chain GO498_09095 PF04976 DMSO reductase anchor subunit (DmsC) GO498_09100 PF12800 4Fe-4S binding domain GO498_09100 PF13247 4Fe-4S dicluster domain GO498_09105 PF01568 Molydopterin dinucleotide binding domain GO498_09105 PF00384 Molybdopterin oxidoreductase GO498_09105 PF04879 Molybdopterin oxidoreductase Fe4S4 domain GO498_09110 PF00455 DeoR C terminal sensor domain GO498_09110 PF08220 DeoR-like helix-turn-helix domain GO498_09115 PF03401 Tripartite tricarboxylate transporter family receptor GO498_09125 PF01970 Tripartite tricarboxylate transporter TctA family GO498_09130 PF02733 Dak1 domain GO498_09135 PF02734 DAK2 domain GO498_09140 PF00701 Dihydrodipicolinate synthetase family GO498_09145 PF00291 Pyridoxal-phosphate dependent enzyme GO498_09150 PF01042 Endoribonuclease L-PSP GO498_09160 PF01810 LysE type translocator GO498_09170 PF00730 HhH-GPD superfamily base excision DNA repair protein GO498_09175 PF02805 Metal binding domain of Ada GO498_09175 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain GO498_09175 PF12833 Helix-turn-helix domain GO498_09175 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain GO498_09190 PF07478 D-ala D-ala ligase C-terminus GO498_09190 PF01820 D-ala D-ala ligase N-terminus GO498_09195 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GO498_09210 PF03180 NLPA lipoprotein GO498_09215 PF01053 Cys/Met metabolism PLP-dependent enzyme GO498_09230 PF07690 Major Facilitator Superfamily GO498_09235 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit GO498_09240 PF03466 LysR substrate binding domain GO498_09240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GO498_09245 PF07690 Major Facilitator Superfamily GO498_09250 PF00440 Bacterial regulatory proteins, tetR family GO498_09250 PF17934 Tetracyclin repressor-like, C-terminal domain GO498_09260 PF12848 ABC transporter GO498_09260 PF00005 ABC transporter GO498_09265 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 GO498_09270 PF01979 Amidohydrolase family GO498_09275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GO498_09275 PF03466 LysR substrate binding domain GO498_09280 PF07690 Major Facilitator Superfamily GO498_09290 PF07690 Major Facilitator Superfamily GO498_09305 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GO498_09305 PF00529 HlyD membrane-fusion protein of T1SS GO498_09310 PF04632 Fusaric acid resistance protein family GO498_09315 PF02321 Outer membrane efflux protein GO498_09325 PF00012 Hsp70 protein GO498_09330 PF01212 Beta-eliminating lyase GO498_09340 PF01810 LysE type translocator GO498_09345 PF00370 FGGY family of carbohydrate kinases, N-terminal domain GO498_09345 PF02782 FGGY family of carbohydrate kinases, C-terminal domain GO498_09355 PF03553 Na+/H+ antiporter family GO498_09365 PF12833 Helix-turn-helix domain GO498_09370 PF09905 DNA-binding protein VF530 GO498_09430 PF05433 Glycine zipper 2TM domain GO498_09440 PF00106 short chain dehydrogenase GO498_09445 PF06932 Protein of unknown function (DUF1283) GO498_09460 PF00480 ROK family GO498_09465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GO498_09465 PF03466 LysR substrate binding domain GO498_09470 PF07690 Major Facilitator Superfamily GO498_09475 PF05472 DNA replication terminus site-binding protein (Ter protein) GO498_09480 PF10415 Fumarase C C-terminus GO498_09480 PF00206 Lyase GO498_09485 PF06097 Bacterial protein of unknown function (DUF945) GO498_09495 PF00962 Adenosine/AMP deaminase GO498_09500 PF13593 SBF-like CPA transporter family (DUF4137) GO498_09505 PF01408 Oxidoreductase family, NAD-binding Rossmann fold GO498_09505 PF02894 Oxidoreductase family, C-terminal alpha/beta domain GO498_09510 PF10754 Protein of unknown function (DUF2569) GO498_09515 PF02508 Rnf-Nqr subunit, membrane protein GO498_09520 PF04060 Putative Fe-S cluster GO498_09525 PF10531 SLBB domain GO498_09525 PF13375 RnfC Barrel sandwich hybrid domain GO498_09525 PF13237 4Fe-4S dicluster domain GO498_09525 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit GO498_09530 PF03116 NQR2, RnfD, RnfE family GO498_09535 PF04205 FMN-binding domain GO498_09540 PF02508 Rnf-Nqr subunit, membrane protein GO498_09545 PF00633 Helix-hairpin-helix motif GO498_09545 PF10576 Iron-sulfur binding domain of endonuclease III GO498_09545 PF00730 HhH-GPD superfamily base excision DNA repair protein GO498_09550 PF08206 Ribonuclease B OB domain GO498_09550 PF00575 S1 RNA binding domain GO498_09550 PF00773 RNB domain GO498_09555 PF01253 Translation initiation factor SUI1 GO498_09560 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family GO498_09565 PF18073 Rubredoxin metal binding domain GO498_09570 PF06305 Lipopolysaccharide assembly protein A domain GO498_09575 PF01569 PAP2 superfamily GO498_09580 PF00925 GTP cyclohydrolase II GO498_09585 PF03180 NLPA lipoprotein GO498_09595 PF00330 Aconitase family (aconitate hydratase) GO498_09595 PF00694 Aconitase C-terminal domain GO498_09605 PF03466 LysR substrate binding domain GO498_09605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GO498_09615 PF00080 Copper/zinc superoxide dismutase (SODC) GO498_09620 PF01131 DNA topoisomerase GO498_09620 PF08272 Topoisomerase I zinc-ribbon-like GO498_09620 PF01396 Topoisomerase DNA binding C4 zinc finger GO498_09620 PF01751 Toprim domain GO498_09625 PF10692 Protein of unknown function (DUF2498) GO498_09630 PF01343 Peptidase family S49 GO498_09630 PF08496 Peptidase family S49 N-terminal GO498_09635 PF00106 short chain dehydrogenase GO498_09640 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP GO498_09650 PF00849 RNA pseudouridylate synthase GO498_09650 PF01479 S4 domain GO498_09655 PF01300 Telomere recombination GO498_09660 PF02811 PHP domain GO498_09665 PF04715 Anthranilate synthase component I, N terminal region GO498_09665 PF00425 chorismate binding enzyme GO498_09670 PF00117 Glutamine amidotransferase class-I GO498_09675 PF00591 Glycosyl transferase family, a/b domain GO498_09675 PF02885 Glycosyl transferase family, helical bundle domain GO498_09680 PF00218 Indole-3-glycerol phosphate synthase GO498_09680 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase GO498_09685 PF00291 Pyridoxal-phosphate dependent enzyme GO498_09690 PF00290 Tryptophan synthase alpha chain GO498_09700 PF03922 OmpW family GO498_09710 PF01740 STAS domain GO498_09710 PF00916 Sulfate permease family GO498_09715 PF04279 Intracellular septation protein A GO498_09720 PF03061 Thioesterase superfamily GO498_09725 PF03544 Gram-negative bacterial TonB protein C-terminal GO498_09735 PF13091 PLD-like domain GO498_09735 PF13396 Phospholipase_D-nuclease N-terminal GO498_09740 PF04269 Protein of unknown function, DUF440 GO498_09745 PF13505 Outer membrane protein beta-barrel domain GO498_09750 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GO498_09760 PF01810 LysE type translocator GO498_09765 PF01171 PP-loop family GO498_09770 PF01544 CorA-like Mg2+ transporter protein GO498_09785 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GO498_09790 PF08534 Redoxin GO498_09795 PF00158 Sigma-54 interaction domain GO498_09795 PF18024 Helix-turn-helix domain GO498_09805 PF05128 Domain of unknown function (DUF697) GO498_09810 PF04317 YcjX-like family, DUF463 GO498_09820 PF04024 PspC domain GO498_09825 PF06667 Phage shock protein B GO498_09830 PF04012 PspA/IM30 family GO498_09835 PF02954 Bacterial regulatory protein, Fis family GO498_09835 PF00158 Sigma-54 interaction domain GO498_09840 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GO498_09845 PF00528 Binding-protein-dependent transport system inner membrane component GO498_09850 PF12911 N-terminal TM domain of oligopeptide transport permease C GO498_09850 PF00528 Binding-protein-dependent transport system inner membrane component GO498_09855 PF00005 ABC transporter GO498_09855 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GO498_09860 PF00005 ABC transporter GO498_09870 PF00043 Glutathione S-transferase, C-terminal domain GO498_09870 PF02798 Glutathione S-transferase, N-terminal domain GO498_09875 PF08543 Phosphomethylpyrimidine kinase GO498_09880 PF01479 S4 domain GO498_09880 PF00579 tRNA synthetases class I (W and Y) GO498_09885 PF01243 Pyridoxamine 5'-phosphate oxidase GO498_09885 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region GO498_09890 PF03702 Anhydro-N-acetylmuramic acid kinase GO498_09895 PF05433 Glycine zipper 2TM domain GO498_09900 PF01047 MarR family GO498_09905 PF06945 Protein of unknown function (DUF1289) GO498_09910 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GO498_09915 PF00929 Exonuclease GO498_09920 PF07282 Putative transposase DNA-binding domain GO498_09920 PF12323 Helix-turn-helix domain GO498_09920 PF01385 Probable transposase GO498_09925 PF01797 Transposase IS200 like GO498_09930 PF00462 Glutaredoxin GO498_09935 PF06440 DNA polymerase III, theta subunit GO498_09940 PF03526 Colicin E1 (microcin) immunity protein GO498_09945 PF03513 Cloacin immunity protein GO498_09955 PF01320 Colicin immunity protein / pyocin immunity protein GO498_09960 PF03515 Colicin-like bacteriocin tRNase domain GO498_09960 PF11570 Coiled-coil receptor-binding R-domain of colicin E2 GO498_10025 PF13614 AAA domain GO498_10140 PF03895 YadA-like membrane anchor domain GO498_10140 PF05658 Head domain of trimeric autotransporter adhesin GO498_10140 PF05662 Coiled stalk of trimeric autotransporter adhesin GO498_10150 PF06530 Phage antitermination protein Q GO498_10165 PF03796 DnaB-like helicase C terminal domain GO498_10165 PF00772 DnaB-like helicase N terminal domain GO498_10245 PF03837 RecT family GO498_10255 PF00436 Single-strand binding protein family GO498_10305 PF00589 Phage integrase family GO498_10305 PF09003 Bacteriophage lambda integrase, Arm DNA-binding domain GO498_10310 PF01872 RibD C-terminal domain GO498_10325 PF01925 Sulfite exporter TauE/SafE GO498_10330 PF02777 Iron/manganese superoxide dismutases, C-terminal domain GO498_10330 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain GO498_10340 PF00356 Bacterial regulatory proteins, lacI family GO498_10345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GO498_10345 PF03466 LysR substrate binding domain GO498_10350 PF07690 Major Facilitator Superfamily GO498_10360 PF00677 Lumazine binding domain GO498_10365 PF01554 MatE GO498_10380 PF00224 Pyruvate kinase, barrel domain GO498_10380 PF02887 Pyruvate kinase, alpha/beta domain GO498_10385 PF13520 Amino acid permease GO498_10390 PF00282 Pyridoxal-dependent decarboxylase conserved domain GO498_10400 PF04728 Lipoprotein leucine-zipper GO498_10405 PF03734 L,D-transpeptidase catalytic domain GO498_10405 PF01476 LysM domain GO498_10405 PF17969 L,D-transpeptidase C-terminal domain GO498_10410 PF02657 Fe-S metabolism associated domain GO498_10415 PF00266 Aminotransferase class-V GO498_10420 PF01458 Uncharacterized protein family (UPF0051) GO498_10425 PF00005 ABC transporter GO498_10430 PF01458 Uncharacterized protein family (UPF0051) GO498_10435 PF01521 Iron-sulphur cluster biosynthesis GO498_10445 PF03061 Thioesterase superfamily GO498_10450 PF02913 FAD linked oxidases, C-terminal domain GO498_10450 PF01565 FAD binding domain GO498_10450 PF13183 4Fe-4S dicluster domain GO498_10455 PF01594 AI-2E family transporter GO498_10460 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain GO498_10460 PF00391 PEP-utilising enzyme, mobile domain GO498_10460 PF02896 PEP-utilising enzyme, TIM barrel domain GO498_10465 PF03618 Kinase/pyrophosphorylase GO498_10470 PF00793 DAHP synthetase I family GO498_10475 PF10636 Hemin uptake protein hemP GO498_10480 PF00593 TonB dependent receptor GO498_10480 PF07715 TonB-dependent Receptor Plug Domain GO498_10485 PF07715 TonB-dependent Receptor Plug Domain GO498_10485 PF00593 TonB dependent receptor GO498_10490 PF05171 Haemin-degrading HemS.ChuX domain GO498_10495 PF01497 Periplasmic binding protein GO498_10500 PF01032 FecCD transport family GO498_10505 PF00005 ABC transporter GO498_10510 PF01037 Lrp/AsnC ligand binding domain GO498_10515 PF01810 LysE type translocator GO498_10520 PF00155 Aminotransferase class I and II GO498_10520 PF00392 Bacterial regulatory proteins, gntR family GO498_10525 PF01654 Cytochrome bd terminal oxidase subunit I GO498_10530 PF02322 Cytochrome bd terminal oxidase subunit II GO498_10545 PF05656 Protein of unknown function (DUF805) GO498_10550 PF02562 PhoH-like protein GO498_10560 PF04231 Endonuclease I GO498_10570 PF12821 Threonine/Serine exporter, ThrE GO498_10575 PF06738 Putative threonine/serine exporter GO498_10600 PF00582 Universal stress protein family GO498_10610 PF00582 Universal stress protein family GO498_10615 PF01256 Carbohydrate kinase GO498_10620 PF10769 Protein of unknown function (DUF2594) GO498_10630 PF00490 Delta-aminolevulinic acid dehydratase GO498_10640 PF07969 Amidohydrolase family GO498_10645 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin GO498_10650 PF05199 GMC oxidoreductase GO498_10650 PF00732 GMC oxidoreductase GO498_10655 PF00171 Aldehyde dehydrogenase family GO498_10660 PF13977 BetI-type transcriptional repressor, C-terminal GO498_10660 PF00440 Bacterial regulatory proteins, tetR family GO498_10665 PF02028 BCCT, betaine/carnitine/choline family transporter GO498_10670 PF00155 Aminotransferase class I and II GO498_10680 PF00419 Fimbrial protein GO498_10685 PF00577 Outer membrane usher protein GO498_10685 PF13953 PapC C-terminal domain GO498_10685 PF13954 PapC N-terminal domain GO498_10690 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain GO498_10690 PF02753 Pili assembly chaperone PapD, C-terminal domain GO498_10695 PF00419 Fimbrial protein GO498_10700 PF00419 Fimbrial protein GO498_10705 PF01381 Helix-turn-helix GO498_10710 PF00005 ABC transporter GO498_10710 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GO498_10715 PF00005 ABC transporter GO498_10715 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GO498_10720 PF12911 N-terminal TM domain of oligopeptide transport permease C GO498_10720 PF00528 Binding-protein-dependent transport system inner membrane component GO498_10725 PF00528 Binding-protein-dependent transport system inner membrane component GO498_10730 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GO498_10735 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GO498_10740 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases GO498_10740 PF14824 Sirohaem biosynthesis protein central GO498_10740 PF10414 Sirohaem synthase dimerisation region GO498_10745 PF13806 Rieske-like [2Fe-2S] domain GO498_10750 PF04324 BFD-like [2Fe-2S] binding domain GO498_10750 PF01077 Nitrite and sulphite reductase 4Fe-4S domain GO498_10750 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain GO498_10750 PF18267 Rubredoxin NAD+ reductase C-terminal domain GO498_10750 PF07992 Pyridine nucleotide-disulphide oxidoreductase GO498_10755 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GO498_10760 PF00528 Binding-protein-dependent transport system inner membrane component GO498_10770 PF00005 ABC transporter GO498_10770 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GO498_10775 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GO498_10775 PF00005 ABC transporter GO498_10780 PF01914 MarC family integral membrane protein GO498_10785 PF00465 Iron-containing alcohol dehydrogenase GO498_10785 PF00171 Aldehyde dehydrogenase family GO498_10790 PF00265 Thymidine kinase GO498_10795 PF00816 H-NS histone family GO498_10800 PF01370 NAD dependent epimerase/dehydratase family GO498_10805 PF00483 Nucleotidyl transferase GO498_10810 PF00072 Response regulator receiver domain GO498_10815 PF02810 SEC-C motif GO498_10820 PF00551 Formyl transferase GO498_10820 PF01842 ACT domain GO498_10830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GO498_10830 PF03466 LysR substrate binding domain GO498_10835 PF03372 Endonuclease/Exonuclease/phosphatase family GO498_10840 PF01131 DNA topoisomerase GO498_10840 PF01751 Toprim domain GO498_10845 PF02769 AIR synthase related protein, C-terminal domain GO498_10845 PF00586 AIR synthase related protein, N-terminal domain GO498_10850 PF00881 Nitroreductase family GO498_10855 PF01343 Peptidase family S49 GO498_10860 PF00710 Asparaginase, N-terminal GO498_10860 PF17763 Glutaminase/Asparaginase C-terminal domain GO498_10865 PF00857 Isochorismatase family GO498_10870 PF07023 Protein of unknown function (DUF1315) GO498_10875 PF01641 SelR domain GO498_10880 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain GO498_10880 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain GO498_10885 PF01263 Aldose 1-epimerase GO498_10890 PF06629 MltA-interacting protein MipA GO498_10895 PF00708 Acylphosphatase GO498_10895 PF17788 HypF Kae1-like domain GO498_10895 PF01300 Telomere recombination GO498_10895 PF07503 HypF finger GO498_10900 PF00842 Alanine racemase, C-terminal domain GO498_10900 PF01168 Alanine racemase, N-terminal domain GO498_10905 PF01266 FAD dependent oxidoreductase GO498_10910 PF07840 FadR C-terminal domain GO498_10910 PF00392 Bacterial regulatory proteins, gntR family GO498_10915 PF06450 Bacterial Na+/H+ antiporter B (NhaB) GO498_10920 PF02600 Disulfide bond formation protein DsbB GO498_10930 PF00893 Small Multidrug Resistance protein GO498_10935 PF07690 Major Facilitator Superfamily GO498_10950 PF03824 High-affinity nickel-transport protein GO498_10955 PF06226 Protein of unknown function (DUF1007) GO498_10985 PF01066 CDP-alcohol phosphatidyltransferase GO498_10990 PF08459 UvrC Helix-hairpin-helix N-terminal GO498_10990 PF02151 UvrB/uvrC motif GO498_10990 PF01541 GIY-YIG catalytic domain GO498_10995 PF00196 Bacterial regulatory proteins, luxR family GO498_10995 PF00072 Response regulator receiver domain GO498_11000 PF00881 Nitroreductase family GO498_11005 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded GO498_11010 PF02126 Phosphotriesterase family GO498_11025 PF00294 pfkB family carbohydrate kinase GO498_11065 PF01381 Helix-turn-helix GO498_11065 PF00717 Peptidase S24-like GO498_11070 PF00005 ABC transporter GO498_11085 PF04198 Putative sugar-binding domain GO498_11090 PF03091 CutA1 divalent ion tolerance protein GO498_11105 PF10127 RNA repair pathway DNA polymerase beta family GO498_11130 PF10134 Replication initiator protein A GO498_11150 PF00589 Phage integrase family GO498_11150 PF13356 Arm DNA-binding domain GO498_11155 PF02540 NAD synthase GO498_11155 PF00958 GMP synthase C terminal domain GO498_11155 PF00117 Glutamine amidotransferase class-I GO498_11160 PF00571 CBS domain GO498_11160 PF00478 IMP dehydrogenase / GMP reductase domain GO498_11165 PF13742 OB-fold nucleic acid binding domain GO498_11165 PF02601 Exonuclease VII, large subunit GO498_11175 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain GO498_11175 PF00326 Prolyl oligopeptidase family GO498_11190 PF00390 Malic enzyme, N-terminal domain GO498_11190 PF01515 Phosphate acetyl/butaryl transferase GO498_11190 PF03949 Malic enzyme, NAD binding domain GO498_11195 PF00196 Bacterial regulatory proteins, luxR family GO498_11195 PF00072 Response regulator receiver domain GO498_11205 PF03960 ArsC family GO498_11210 PF07687 Peptidase dimerisation domain GO498_11210 PF01546 Peptidase family M20/M25/M40 GO498_11215 PF02557 D-alanyl-D-alanine carboxypeptidase GO498_11225 PF07282 Putative transposase DNA-binding domain GO498_11225 PF01385 Probable transposase GO498_11225 PF12323 Helix-turn-helix domain GO498_11230 PF04304 Protein of unknown function (DUF454) GO498_11235 PF13980 Uncharacterised protein family (UPF0370) GO498_11240 PF13718 GNAT acetyltransferase 2 GO498_11240 PF05127 Helicase GO498_11240 PF17176 tRNA-binding domain GO498_11240 PF08351 Domain of unknown function (DUF1726) GO498_11245 PF04284 Protein of unknown function (DUF441) GO498_11250 PF04228 Putative neutral zinc metallopeptidase GO498_11255 PF01259 SAICAR synthetase GO498_11260 PF06804 NlpB/DapX lipoprotein GO498_11265 PF00701 Dihydrodipicolinate synthetase family GO498_11270 PF01842 ACT domain GO498_11275 PF00578 AhpC/TSA family GO498_11280 PF01594 AI-2E family transporter GO498_11285 PF01435 Peptidase family M48 GO498_11285 PF07720 Tetratricopeptide repeat GO498_11290 PF03960 ArsC family GO498_11295 PF03825 Nucleoside H+ symporter GO498_11300 PF00308 Bacterial dnaA protein GO498_11305 PF00924 Mechanosensitive ion channel GO498_11310 PF00860 Permease family GO498_11320 PF00586 AIR synthase related protein, N-terminal domain GO498_11320 PF02769 AIR synthase related protein, C-terminal domain GO498_11325 PF00551 Formyl transferase GO498_11330 PF13302 Acetyltransferase (GNAT) domain GO498_11335 PF17941 Polyphosphate kinase C-terminal domain 1 GO498_11335 PF13090 Polyphosphate kinase C-terminal domain 2 GO498_11335 PF02503 Polyphosphate kinase middle domain GO498_11335 PF13089 Polyphosphate kinase N-terminal domain GO498_11340 PF02541 Ppx/GppA phosphatase family GO498_11345 PF03448 MgtE intracellular N domain GO498_11345 PF01769 Divalent cation transporter GO498_11345 PF00571 CBS domain GO498_11355 PF07690 Major Facilitator Superfamily GO498_11370 PF00854 POT family GO498_11375 PF01385 Probable transposase GO498_11375 PF12323 Helix-turn-helix domain GO498_11375 PF07282 Putative transposase DNA-binding domain GO498_11385 PF13533 Biotin-lipoyl like GO498_11390 PF00873 AcrB/AcrD/AcrF family GO498_11395 PF00873 AcrB/AcrD/AcrF family GO498_11400 PF00672 HAMP domain GO498_11400 PF00512 His Kinase A (phospho-acceptor) domain GO498_11400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GO498_11405 PF00486 Transcriptional regulatory protein, C terminal GO498_11405 PF00072 Response regulator receiver domain GO498_11415 PF00781 Diacylglycerol kinase catalytic domain GO498_11420 PF01791 DeoC/LacD family aldolase GO498_11425 PF08543 Phosphomethylpyrimidine kinase GO498_11430 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP GO498_11435 PF00324 Amino acid permease GO498_11445 PF12833 Helix-turn-helix domain GO498_11455 PF05525 Branched-chain amino acid transport protein GO498_11460 PF01510 N-acetylmuramoyl-L-alanine amidase GO498_11465 PF01235 Sodium:alanine symporter family GO498_11470 PF06440 DNA polymerase III, theta subunit GO498_11475 PF13995 YebF-like protein GO498_11480 PF03701 Uncharacterised protein family (UPF0181) GO498_11485 PF00425 chorismate binding enzyme GO498_11485 PF04715 Anthranilate synthase component I, N terminal region GO498_11490 PF00293 NUDIX domain GO498_11495 PF03313 Serine dehydratase alpha chain GO498_11495 PF03315 Serine dehydratase beta chain GO498_11500 PF02659 Putative manganese efflux pump GO498_11505 PF13847 Methyltransferase domain GO498_11510 PF06146 Phosphate-starvation-inducible E GO498_11515 PF00582 Universal stress protein family GO498_11525 PF00582 Universal stress protein family GO498_11530 PF00324 Amino acid permease GO498_11540 PF00474 Sodium:solute symporter family GO498_11545 PF00171 Aldehyde dehydrogenase family GO498_11545 PF01619 Proline dehydrogenase GO498_11545 PF14850 DNA-binding domain of Proline dehydrogenase GO498_11545 PF18327 Proline utilization A proline dehydrogenase N-terminal domain GO498_11550 PF02899 Phage integrase, N-terminal SAM-like domain GO498_11555 PF04542 Sigma-70 region 2 GO498_11555 PF04539 Sigma-70 region 3 GO498_11555 PF04545 Sigma-70, region 4 GO498_11560 PF00700 Bacterial flagellin C-terminal helical region GO498_11560 PF00669 Bacterial flagellin N-terminal helical region GO498_11565 PF00700 Bacterial flagellin C-terminal helical region GO498_11565 PF00669 Bacterial flagellin N-terminal helical region GO498_11570 PF07195 Flagellar hook-associated protein 2 C-terminus GO498_11570 PF07196 Flagellin hook IN motif GO498_11570 PF02465 Flagellar hook-associated protein 2 N-terminus GO498_11575 PF02561 Flagellar protein FliS GO498_11580 PF05400 Flagellar protein FliT GO498_11605 PF02049 Flagellar hook-basal body complex protein FliE GO498_11610 PF01514 Secretory protein of YscJ/FliF family GO498_11610 PF08345 Flagellar M-ring protein C-terminal GO498_11615 PF14841 FliG middle domain GO498_11615 PF01706 FliG C-terminal domain GO498_11615 PF14842 FliG N-terminal domain GO498_11620 PF02108 Flagellar assembly protein FliH GO498_11625 PF18269 T3SS EscN ATPase C-terminal domain GO498_11625 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GO498_11630 PF02050 Flagellar FliJ protein GO498_11635 PF02120 Flagellar hook-length control protein FliK GO498_11640 PF03748 Flagellar basal body-associated protein FliL GO498_11645 PF02154 Flagellar motor switch protein FliM GO498_11645 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term GO498_11650 PF16973 Flagellar motor switch protein FliN N-terminal GO498_11650 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term GO498_11655 PF04347 Flagellar biosynthesis protein, FliO GO498_11660 PF00813 FliP family GO498_11665 PF01313 Bacterial export proteins, family 3 GO498_11670 PF01311 Bacterial export proteins, family 1 GO498_11675 PF00669 Bacterial flagellin N-terminal helical region GO498_11680 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GO498_11680 PF00460 Flagella basal body rod protein GO498_11685 PF10135 Rod binding protein GO498_11685 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase GO498_11690 PF02119 Flagellar P-ring protein GO498_11695 PF02107 Flagellar L-ring protein GO498_11700 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GO498_11700 PF00460 Flagella basal body rod protein GO498_11705 PF00460 Flagella basal body rod protein GO498_11705 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GO498_11710 PF00460 Flagella basal body rod protein GO498_11710 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GO498_11710 PF07559 Flagellar basal body protein FlaE GO498_11715 PF13860 FlgD Ig-like domain GO498_11715 PF03963 Flagellar hook capping protein - N-terminal region GO498_11715 PF13861 FlgD Tudor-like domain GO498_11720 PF00460 Flagella basal body rod protein GO498_11720 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GO498_11725 PF00460 Flagella basal body rod protein GO498_11730 PF17656 FlgA N-terminal domain GO498_11730 PF13144 Chaperone for flagella basal body P-ring formation GO498_11735 PF04316 Anti-sigma-28 factor, FlgM GO498_11740 PF05130 FlgN protein GO498_11745 PF13018 Extended Signal Peptide of Type V secretion system GO498_11745 PF13332 Hemagglutinin repeat GO498_11745 PF05860 haemagglutination activity domain GO498_11745 PF04829 Pre-toxin domain with VENN motif GO498_11755 PF00771 FHIPEP family GO498_11760 PF01312 FlhB HrpN YscU SpaS Family GO498_11770 PF04344 Chemotaxis phosphatase, CheZ GO498_11775 PF00072 Response regulator receiver domain GO498_11780 PF01339 CheB methylesterase GO498_11780 PF00072 Response regulator receiver domain GO498_11785 PF03705 CheR methyltransferase, all-alpha domain GO498_11785 PF01739 CheR methyltransferase, SAM binding domain GO498_11790 PF02203 Tar ligand binding domain homologue GO498_11790 PF00672 HAMP domain GO498_11790 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GO498_11795 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GO498_11795 PF00672 HAMP domain GO498_11795 PF02203 Tar ligand binding domain homologue GO498_11800 PF01584 CheW-like domain GO498_11805 PF02895 Signal transducing histidine kinase, homodimeric domain GO498_11805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GO498_11805 PF01584 CheW-like domain GO498_11805 PF09078 CheY binding GO498_11805 PF01627 Hpt domain GO498_11810 PF00691 OmpA family GO498_11810 PF13677 Membrane MotB of proton-channel complex MotA/MotB GO498_11815 PF01618 MotA/TolQ/ExbB proton channel family GO498_11820 PF05280 Flagellar transcriptional activator (FlhC) GO498_11825 PF05247 Flagellar transcriptional activator (FlhD) GO498_11830 PF02308 MgtC family GO498_11835 PF10781 Dextransucrase DSRB GO498_11840 PF00313 'Cold-shock' DNA-binding domain GO498_11845 PF10777 Inner membrane protein YlaC GO498_11870 PF01979 Amidohydrolase family GO498_11875 PF13991 BssS protein family GO498_11885 PF01568 Molydopterin dinucleotide binding domain GO498_11885 PF04879 Molybdopterin oxidoreductase Fe4S4 domain GO498_11885 PF00384 Molybdopterin oxidoreductase GO498_11890 PF03916 Polysulphide reductase, NrfD GO498_11895 PF13247 4Fe-4S dicluster domain GO498_11900 PF00512 His Kinase A (phospho-acceptor) domain GO498_11900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GO498_11905 PF00196 Bacterial regulatory proteins, luxR family GO498_11905 PF00072 Response regulator receiver domain GO498_11910 PF03279 Bacterial lipid A biosynthesis acyltransferase GO498_11915 PF07690 Major Facilitator Superfamily GO498_11920 PF00854 POT family GO498_11925 PF02567 Phenazine biosynthesis-like protein GO498_11930 PF03061 Thioesterase superfamily GO498_11940 PF00132 Bacterial transferase hexapeptide (six repeats) GO498_11945 PF00724 NADH:flavin oxidoreductase / NADH oxidase family GO498_11955 PF00486 Transcriptional regulatory protein, C terminal GO498_11955 PF00072 Response regulator receiver domain GO498_11960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GO498_11960 PF00512 His Kinase A (phospho-acceptor) domain GO498_11970 PF03591 AzlC protein GO498_11980 PF01063 Amino-transferase class IV GO498_11985 PF03729 Short repeat of unknown function (DUF308) GO498_11990 PF00924 Mechanosensitive ion channel GO498_11995 PF04879 Molybdopterin oxidoreductase Fe4S4 domain GO498_11995 PF00384 Molybdopterin oxidoreductase GO498_11995 PF01568 Molydopterin dinucleotide binding domain GO498_12000 PF13247 4Fe-4S dicluster domain GO498_12000 PF12800 4Fe-4S binding domain GO498_12005 PF04976 DMSO reductase anchor subunit (DmsC) GO498_12015 PF10753 Toxin GhoT_OrtT GO498_12110 PF00579 tRNA synthetases class I (W and Y) GO498_12125 PF06440 DNA polymerase III, theta subunit GO498_12300 PF00149 Calcineurin-like phosphoesterase GO498_12385 PF00717 Peptidase S24-like GO498_12385 PF01381 Helix-turn-helix GO498_12450 PF00436 Single-strand binding protein family GO498_12500 PF00589 Phage integrase family GO498_12510 PF01627 Hpt domain GO498_12510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GO498_12510 PF16359 RcsD-ABL domain GO498_12515 PF00196 Bacterial regulatory proteins, luxR family GO498_12515 PF00072 Response regulator receiver domain GO498_12520 PF00072 Response regulator receiver domain GO498_12520 PF09456 RcsC Alpha-Beta-Loop (ABL) GO498_12520 PF00512 His Kinase A (phospho-acceptor) domain GO498_12520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GO498_12525 PF00521 DNA gyrase/topoisomerase IV, subunit A GO498_12525 PF03989 DNA gyrase C-terminal domain, beta-propeller GO498_12535 PF02867 Ribonucleotide reductase, barrel domain GO498_12535 PF00317 Ribonucleotide reductase, all-alpha domain GO498_12535 PF03477 ATP cone domain GO498_12540 PF00268 Ribonucleotide reductase, small chain GO498_12545 PF00111 2Fe-2S iron-sulfur cluster binding domain GO498_12550 PF06004 Bacterial protein of unknown function (DUF903) GO498_12555 PF03222 Tryptophan/tyrosine permease family GO498_12560 PF07437 YfaZ precursor GO498_12565 PF00199 Catalase GO498_12565 PF06628 Catalase-related immune-responsive GO498_12570 PF13193 AMP-binding enzyme C-terminal domain GO498_12570 PF00501 AMP-binding enzyme GO498_12575 PF13378 Enolase C-terminal domain-like GO498_12580 PF00378 Enoyl-CoA hydratase/isomerase GO498_12585 PF12697 Alpha/beta hydrolase family GO498_12590 PF16582 Middle domain of thiamine pyrophosphate GO498_12590 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain GO498_12595 PF00425 chorismate binding enzyme GO498_12610 PF00361 Proton-conducting membrane transporter GO498_12615 PF00361 Proton-conducting membrane transporter GO498_12620 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus GO498_12620 PF00361 Proton-conducting membrane transporter GO498_12625 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L GO498_12630 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 GO498_12635 PF12838 4Fe-4S dicluster domain GO498_12640 PF00146 NADH dehydrogenase GO498_12645 PF04879 Molybdopterin oxidoreductase Fe4S4 domain GO498_12645 PF01568 Molydopterin dinucleotide binding domain GO498_12645 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region GO498_12645 PF00384 Molybdopterin oxidoreductase GO498_12650 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit GO498_12650 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region GO498_12650 PF10531 SLBB domain GO498_12660 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit GO498_12660 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit GO498_12665 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit GO498_12670 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 GO498_12680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GO498_12680 PF03466 LysR substrate binding domain GO498_12685 PF00155 Aminotransferase class I and II GO498_12695 PF02080 TrkA-C domain GO498_12695 PF03600 Citrate transporter GO498_12700 PF13419 Haloacid dehalogenase-like hydrolase GO498_12705 PF03887 YfbU domain GO498_12710 PF04217 Protein of unknown function, DUF412 GO498_12715 PF00871 Acetokinase family GO498_12720 PF01515 Phosphate acetyl/butaryl transferase GO498_12720 PF07085 DRTGG domain GO498_12725 PF01848 Hok/gef family GO498_12730 PF01848 Hok/gef family GO498_12735 PF01848 Hok/gef family GO498_12740 PF01011 PQQ enzyme repeat GO498_12745 PF01168 Alanine racemase, N-terminal domain GO498_12745 PF00842 Alanine racemase, C-terminal domain GO498_12750 PF03611 PTS system sugar-specific permease component GO498_12760 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 GO498_12765 PF00356 Bacterial regulatory proteins, lacI family GO498_12765 PF13407 Periplasmic binding protein domain GO498_12770 PF00293 NUDIX domain GO498_12775 PF00043 Glutathione S-transferase, C-terminal domain GO498_12775 PF02798 Glutathione S-transferase, N-terminal domain GO498_12780 PF08338 Domain of unknown function (DUF1731) GO498_12780 PF01370 NAD dependent epimerase/dehydratase family GO498_12785 PF02441 Flavoprotein GO498_12790 PF00156 Phosphoribosyl transferase domain GO498_12795 PF02674 Colicin V production protein GO498_12800 PF05036 Sporulation related domain GO498_12805 PF02875 Mur ligase family, glutamate ligase domain GO498_12805 PF08245 Mur ligase middle domain GO498_12810 PF01039 Carboxyl transferase domain GO498_12810 PF17848 Acetyl-coA carboxylase zinc finger domain GO498_12815 PF09335 SNARE associated Golgi protein GO498_12820 PF01416 tRNA pseudouridine synthase GO498_12825 PF02774 Semialdehyde dehydrogenase, dimerisation domain GO498_12825 PF01118 Semialdehyde dehydrogenase, NAD binding domain GO498_12830 PF11890 Domain of unknown function (DUF3410) GO498_12830 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GO498_12830 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO498_12835 PF12833 Helix-turn-helix domain GO498_12840 PF00892 EamA-like transporter family GO498_12845 PF00109 Beta-ketoacyl synthase, N-terminal domain GO498_12845 PF02801 Beta-ketoacyl synthase, C-terminal domain GO498_12850 PF01266 FAD dependent oxidoreductase GO498_12850 PF05430 S-adenosyl-L-methionine-dependent methyltransferase GO498_12855 PF00583 Acetyltransferase (GNAT) family GO498_12865 PF08891 YfcL protein GO498_12870 PF04315 Elongation factor P hydroxylase GO498_12875 PF01925 Sulfite exporter TauE/SafE GO498_12880 PF01264 Chorismate synthase GO498_12885 PF05175 Methyltransferase small domain GO498_12890 PF00210 Ferritin-like domain GO498_12895 PF01713 Smr domain GO498_12900 PF00300 Histidine phosphatase superfamily (branch 1) GO498_12905 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain GO498_12905 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain GO498_12905 PF00378 Enoyl-CoA hydratase/isomerase GO498_12910 PF02803 Thiolase, C-terminal domain GO498_12910 PF00108 Thiolase, N-terminal domain GO498_12915 PF04175 Protein of unknown function (DUF406) GO498_12920 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) GO498_12925 PF04333 MlaA lipoprotein GO498_12945 PF04879 Molybdopterin oxidoreductase Fe4S4 domain GO498_12945 PF00384 Molybdopterin oxidoreductase GO498_12945 PF01568 Molydopterin dinucleotide binding domain GO498_12950 PF12800 4Fe-4S binding domain GO498_12950 PF13247 4Fe-4S dicluster domain GO498_12955 PF01292 Prokaryotic cytochrome b561 GO498_12960 PF01381 Helix-turn-helix GO498_13005 PF00749 tRNA synthetases class I (E and Q), catalytic domain GO498_13030 PF12843 Putative quorum-sensing-regulated virulence factor GO498_13035 PF01773 Na+ dependent nucleoside transporter N-terminus GO498_13035 PF07662 Na+ dependent nucleoside transporter C-terminus GO498_13035 PF07670 Nucleoside recognition GO498_13040 PF03120 NAD-dependent DNA ligase OB-fold domain GO498_13040 PF03119 NAD-dependent DNA ligase C4 zinc finger domain GO498_13040 PF12826 Helix-hairpin-helix motif GO498_13040 PF00533 BRCA1 C Terminus (BRCT) domain GO498_13040 PF01653 NAD-dependent DNA ligase adenylation domain GO498_13050 PF04354 ZipA, C-terminal FtsZ-binding domain GO498_13060 PF00291 Pyridoxal-phosphate dependent enzyme GO498_13065 PF00381 PTS HPr component phosphorylation site GO498_13070 PF00391 PEP-utilising enzyme, mobile domain GO498_13070 PF02896 PEP-utilising enzyme, TIM barrel domain GO498_13070 PF05524 PEP-utilising enzyme, N-terminal GO498_13075 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 GO498_13080 PF00291 Pyridoxal-phosphate dependent enzyme GO498_13085 PF00005 ABC transporter GO498_13090 PF00528 Binding-protein-dependent transport system inner membrane component GO498_13095 PF00528 Binding-protein-dependent transport system inner membrane component GO498_13105 PF04261 Dyp-type peroxidase family GO498_13110 PF06572 Protein of unknown function (DUF1131) GO498_13115 PF00583 Acetyltransferase (GNAT) family GO498_13120 PF01218 Coproporphyrinogen III oxidase GO498_13130 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal GO498_13130 PF01926 50S ribosome-binding GTPase GO498_13135 PF13360 PQQ-like domain GO498_13140 PF09976 Tetratricopeptide repeat-like domain GO498_13145 PF03129 Anticodon binding domain GO498_13145 PF13393 Histidyl-tRNA synthetase GO498_13150 PF04551 GcpE protein GO498_13155 PF13464 Domain of unknown function (DUF4115) GO498_13165 PF04055 Radical SAM superfamily GO498_13170 PF00334 Nucleoside diphosphate kinase GO498_13175 PF00912 Transglycosylase GO498_13175 PF00905 Penicillin binding protein transpeptidase domain GO498_13175 PF06832 Penicillin-Binding Protein C-terminus Family GO498_13180 PF07678 A-macroglobulin TED domain GO498_13180 PF01835 MG2 domain GO498_13180 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain GO498_13180 PF07703 Alpha-2-macroglobulin bait region domain GO498_13180 PF17962 Bacterial macroglobulin domain 6 GO498_13180 PF00207 Alpha-2-macroglobulin family GO498_13180 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain GO498_13180 PF11974 Bacterial alpha-2-macroglobulin MG3 domain GO498_13180 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain GO498_13185 PF07179 SseB protein N-terminal domain GO498_13185 PF14581 SseB protein C-terminal domain GO498_13190 PF12404 Peptidase GO498_13190 PF00883 Cytosol aminopeptidase family, catalytic domain GO498_13195 PF04384 Iron-sulphur cluster assembly GO498_13200 PF00111 2Fe-2S iron-sulfur cluster binding domain GO498_13205 PF00012 Hsp70 protein GO498_13210 PF00226 DnaJ domain GO498_13210 PF07743 HSCB C-terminal oligomerisation domain GO498_13215 PF01521 Iron-sulphur cluster biosynthesis GO498_13220 PF01592 NifU-like N terminal domain GO498_13225 PF00266 Aminotransferase class-V GO498_13230 PF02082 Transcriptional regulator GO498_13235 PF00588 SpoU rRNA Methylase family GO498_13240 PF00459 Inositol monophosphatase family GO498_13255 PF12832 MFS_1 like family GO498_13260 PF00464 Serine hydroxymethyltransferase GO498_13265 PF00970 Oxidoreductase FAD-binding domain GO498_13265 PF00042 Globin GO498_13265 PF00175 Oxidoreductase NAD-binding domain GO498_13275 PF00543 Nitrogen regulatory protein P-II GO498_13280 PF00795 Carbon-nitrogen hydrolase GO498_13280 PF02540 NAD synthase GO498_13285 PF00072 Response regulator receiver domain GO498_13285 PF00158 Sigma-54 interaction domain GO498_13290 PF13942 YfhG lipoprotein GO498_13295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GO498_13295 PF00512 His Kinase A (phospho-acceptor) domain GO498_13300 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal GO498_13300 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain GO498_13300 PF02769 AIR synthase related protein, C-terminal domain GO498_13305 PF00497 Bacterial extracellular solute-binding proteins, family 3 GO498_13305 PF01464 Transglycosylase SLT domain GO498_13310 PF00419 Fimbrial protein GO498_13315 PF13953 PapC C-terminal domain GO498_13315 PF13954 PapC N-terminal domain GO498_13315 PF00577 Outer membrane usher protein GO498_13320 PF02753 Pili assembly chaperone PapD, C-terminal domain GO498_13320 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain GO498_13325 PF00419 Fimbrial protein GO498_13330 PF00419 Fimbrial protein GO498_13335 PF14437 MafB19-like deaminase GO498_13340 PF12838 4Fe-4S dicluster domain GO498_13345 PF01648 4'-phosphopantetheinyl transferase superfamily GO498_13350 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ GO498_13355 PF11967 Recombination protein O N terminal GO498_13355 PF02565 Recombination protein O C terminal GO498_13360 PF07650 KH domain GO498_13360 PF01926 50S ribosome-binding GTPase GO498_13365 PF14622 Ribonuclease-III-like GO498_13365 PF00035 Double-stranded RNA binding motif GO498_13370 PF10502 Signal peptidase, peptidase S26 GO498_13375 PF00009 Elongation factor Tu GTP binding domain GO498_13375 PF03144 Elongation factor Tu domain 2 GO498_13375 PF06421 GTP-binding protein LepA C-terminus GO498_13375 PF00679 Elongation factor G C-terminus GO498_13385 PF03888 MucB/RseB N-terminal domain GO498_13385 PF17188 MucB/RseB C-terminal domain GO498_13390 PF03873 Anti sigma-E protein RseA, C-terminal domain GO498_13390 PF03872 Anti sigma-E protein RseA, N-terminal domain GO498_13395 PF04542 Sigma-70 region 2 GO498_13395 PF08281 Sigma-70, region 4 GO498_13400 PF05175 Methyltransferase small domain GO498_13405 PF00270 DEAD/DEAH box helicase GO498_13405 PF00271 Helicase conserved C-terminal domain GO498_13410 PF01228 Glycine radical GO498_13420 PF03167 Uracil DNA glycosylase superfamily GO498_13425 PF01025 GrpE GO498_13430 PF01513 ATP-NAD kinase GO498_13435 PF02463 RecF/RecN/SMC N terminal domain GO498_13440 PF04355 SmpA / OmlA family GO498_13445 PF03658 RnfH family Ubiquitin GO498_13450 PF03364 Polyketide cyclase / dehydrase and lipid transport GO498_13455 PF01668 SmpB protein GO498_13470 PF00293 NUDIX domain GO498_13500 PF07510 Protein of unknown function (DUF1524) GO498_13505 PF18766 SWI2/SNF2 ATPase GO498_13505 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) GO498_13505 PF11867 Domain of unknown function (DUF3387) GO498_13525 PF00892 EamA-like transporter family GO498_13530 PF00155 Aminotransferase class I and II GO498_13530 PF00392 Bacterial regulatory proteins, gntR family GO498_13565 PF17287 POTRA domain GO498_13565 PF08479 POTRA domain, ShlB-type GO498_13565 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB GO498_13570 PF13332 Hemagglutinin repeat GO498_13570 PF05860 haemagglutination activity domain GO498_13570 PF04829 Pre-toxin domain with VENN motif GO498_13570 PF05860 haemagglutination activity domain GO498_13570 PF04829 Pre-toxin domain with VENN motif GO498_13570 PF13332 Hemagglutinin repeat GO498_13590 PF06039 Malate:quinone oxidoreductase (Mqo) GO498_13605 PF02525 Flavodoxin-like fold GO498_13610 PF07690 Major Facilitator Superfamily GO498_13615 PF02652 L-lactate permease GO498_13620 PF02754 Cysteine-rich domain GO498_13625 PF11870 Domain of unknown function (DUF3390) GO498_13625 PF13183 4Fe-4S dicluster domain GO498_13625 PF02589 LUD domain GO498_13630 PF02589 LUD domain GO498_13645 PF03692 Putative zinc- or iron-chelating domain GO498_13650 PF06940 Domain of unknown function (DUF1287) GO498_13655 PF07690 Major Facilitator Superfamily GO498_13660 PF00756 Putative esterase GO498_13665 PF07715 TonB-dependent Receptor Plug Domain GO498_13665 PF00593 TonB dependent receptor GO498_13670 PF00474 Sodium:solute symporter family GO498_13675 PF00356 Bacterial regulatory proteins, lacI family GO498_13680 PF01263 Aldose 1-epimerase GO498_13685 PF08544 GHMP kinases C terminal GO498_13685 PF00288 GHMP kinases N terminal domain GO498_13685 PF10509 Galactokinase galactose-binding signature GO498_13690 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain GO498_13690 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain GO498_13695 PF16363 GDP-mannose 4,6 dehydratase GO498_13700 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GO498_13700 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO498_13705 PF16916 Dimerisation domain of Zinc Transporter GO498_13705 PF01545 Cation efflux family GO498_13710 PF00582 Universal stress protein family GO498_13715 PF03974 Ecotin GO498_13720 PF04325 Protein of unknown function (DUF465) GO498_13725 PF10678 Protein of unknown function (DUF2492) GO498_13735 PF11756 Nitrous oxide-stimulated promoter GO498_13740 PF13302 Acetyltransferase (GNAT) domain GO498_13750 PF12833 Helix-turn-helix domain GO498_13770 PF03358 NADPH-dependent FMN reductase GO498_13785 PF02753 Pili assembly chaperone PapD, C-terminal domain GO498_13785 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain GO498_13795 PF00577 Outer membrane usher protein GO498_13795 PF13954 PapC N-terminal domain GO498_13795 PF13953 PapC C-terminal domain GO498_13800 PF02753 Pili assembly chaperone PapD, C-terminal domain GO498_13800 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain GO498_13805 PF16970 Type-1 fimbrial protein, A GO498_13830 PF13505 Outer membrane protein beta-barrel domain GO498_13845 PF00152 tRNA synthetases class II (D, K and N) GO498_13845 PF01336 OB-fold nucleic acid binding domain GO498_13855 PF01368 DHH family GO498_13855 PF02272 DHHA1 domain GO498_13855 PF17768 RecJ OB domain GO498_13860 PF10411 Disulfide bond isomerase protein N-terminus GO498_13860 PF13098 Thioredoxin-like domain GO498_13865 PF02899 Phage integrase, N-terminal SAM-like domain GO498_13865 PF00589 Phage integrase family GO498_13870 PF00258 Flavodoxin GO498_13875 PF07254 Membrane-bound toxin component of toxin-antitoxin system GO498_13885 PF03937 Flavinator of succinate dehydrogenase GO498_13890 PF01571 Aminomethyltransferase folate-binding domain GO498_13900 PF02347 Glycine cleavage system P-protein GO498_13905 PF01597 Glycine cleavage H-protein GO498_13910 PF01571 Aminomethyltransferase folate-binding domain GO498_13910 PF08669 Glycine cleavage T-protein C-terminal barrel domain GO498_13915 PF01494 FAD binding domain GO498_13920 PF01494 FAD binding domain GO498_13925 PF05195 Aminopeptidase P, N-terminal domain GO498_13925 PF00557 Metallopeptidase family M24 GO498_13930 PF03695 Uncharacterised protein family (UPF0149) GO498_13935 PF05164 Cell division protein ZapA GO498_13945 PF01812 5-formyltetrahydrofolate cyclo-ligase family GO498_13950 PF00664 ABC transporter transmembrane region GO498_13950 PF00005 ABC transporter GO498_13950 PF03412 Peptidase C39 family GO498_13960 PF00664 ABC transporter transmembrane region GO498_13960 PF00005 ABC transporter GO498_13960 PF03412 Peptidase C39 family GO498_13965 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GO498_13965 PF01842 ACT domain GO498_13965 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO498_13970 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) GO498_13975 PF03466 LysR substrate binding domain GO498_13975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GO498_13990 PF04402 Protein of unknown function (DUF541) GO498_13995 PF01810 LysE type translocator GO498_14000 PF05552 Conserved TM helix GO498_14000 PF00924 Mechanosensitive ion channel GO498_14005 PF06062 Uncharacterised protein family (UPF0231) GO498_14010 PF00330 Aconitase family (aconitate hydratase) GO498_14010 PF06434 Aconitate hydratase 2 N-terminus GO498_14010 PF11791 Aconitate B N-terminal domain GO498_14025 PF07992 Pyridine nucleotide-disulphide oxidoreductase GO498_14025 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO498_14030 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) GO498_14030 PF00364 Biotin-requiring enzyme GO498_14030 PF02817 e3 binding domain GO498_14035 PF00456 Transketolase, thiamine diphosphate binding domain GO498_14035 PF17831 Pyruvate dehydrogenase E1 component middle domain GO498_14040 PF00392 Bacterial regulatory proteins, gntR family GO498_14040 PF07729 FCD domain GO498_14045 PF01510 N-acetylmuramoyl-L-alanine amidase GO498_14050 PF07963 Prokaryotic N-terminal methylation motif GO498_14055 PF00437 Type II/IV secretion system protein GO498_14055 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain GO498_14060 PF00482 Type II secretion system (T2SS), protein F GO498_14065 PF01121 Dephospho-CoA kinase GO498_14070 PF07072 Cell division protein GO498_14075 PF03884 DNA gyrase inhibitor YacG GO498_14080 PF00293 NUDIX domain GO498_14085 PF08479 POTRA domain, ShlB-type GO498_14085 PF17287 POTRA domain GO498_14085 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB GO498_14090 PF13332 Hemagglutinin repeat GO498_14090 PF05860 haemagglutination activity domain GO498_14095 PF00403 Heavy-metal-associated domain GO498_14100 PF00376 MerR family regulatory protein GO498_14100 PF09278 MerR, DNA binding GO498_14105 PF02810 SEC-C motif GO498_14105 PF07517 SecA DEAD-like domain GO498_14105 PF07516 SecA Wing and Scaffold domain GO498_14105 PF01043 SecA preprotein cross-linking domain GO498_14110 PF06558 Secretion monitor precursor protein (SecM) GO498_14120 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase GO498_14125 PF12327 FtsZ family, C-terminal domain GO498_14125 PF00091 Tubulin/FtsZ family, GTPase domain GO498_14130 PF02491 SHS2 domain inserted in FTSA GO498_14135 PF08478 POTRA domain, FtsQ-type GO498_14135 PF03799 Cell division protein FtsQ GO498_14145 PF01225 Mur ligase family, catalytic domain GO498_14145 PF08245 Mur ligase middle domain GO498_14145 PF02875 Mur ligase family, glutamate ligase domain GO498_14150 PF04101 Glycosyltransferase family 28 C-terminal domain GO498_14150 PF03033 Glycosyltransferase family 28 N-terminal domain GO498_14155 PF01098 Cell cycle protein GO498_14160 PF08245 Mur ligase middle domain GO498_14160 PF02875 Mur ligase family, glutamate ligase domain GO498_14165 PF00953 Glycosyl transferase family 4 GO498_14165 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 GO498_14170 PF08245 Mur ligase middle domain GO498_14170 PF01225 Mur ligase family, catalytic domain GO498_14170 PF02875 Mur ligase family, glutamate ligase domain GO498_14175 PF08245 Mur ligase middle domain GO498_14175 PF01225 Mur ligase family, catalytic domain GO498_14175 PF02875 Mur ligase family, glutamate ligase domain GO498_14180 PF00905 Penicillin binding protein transpeptidase domain GO498_14180 PF03717 Penicillin-binding Protein dimerisation domain GO498_14185 PF04999 Cell division protein FtsL GO498_14190 PF01795 MraW methylase family GO498_14195 PF02381 MraZ protein, putative antitoxin-like GO498_14200 PF00356 Bacterial regulatory proteins, lacI family GO498_14200 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family GO498_14205 PF00501 AMP-binding enzyme GO498_14210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GO498_14210 PF03466 LysR substrate binding domain GO498_14220 PF00682 HMGL-like GO498_14220 PF08502 LeuA allosteric (dimerisation) domain GO498_14225 PF00180 Isocitrate/isopropylmalate dehydrogenase GO498_14230 PF00330 Aconitase family (aconitate hydratase) GO498_14235 PF00694 Aconitase C-terminal domain GO498_14240 PF12793 Sugar transport-related sRNA regulator N-term GO498_14240 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GO498_14245 PF02976 DNA mismatch repair enzyme MutH GO498_14255 PF05973 Phage derived protein Gp49-like (DUF891) GO498_14260 PF00106 short chain dehydrogenase GO498_14265 PF00491 Arginase family GO498_14270 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain GO498_14270 PF17810 Arginine decarboxylase helical bundle domain GO498_14270 PF17944 Arginine decarboxylase C-terminal helical extension GO498_14275 PF02772 S-adenosylmethionine synthetase, central domain GO498_14275 PF00438 S-adenosylmethionine synthetase, N-terminal domain GO498_14275 PF02773 S-adenosylmethionine synthetase, C-terminal domain GO498_14280 PF11658 Cellulose biosynthesis protein BcsG GO498_14290 PF06564 Cellulose biosynthesis protein BcsQ GO498_14295 PF00535 Glycosyl transferase family 2 GO498_14295 PF07238 PilZ domain GO498_14300 PF03170 Bacterial cellulose synthase subunit GO498_14315 PF04143 Sulphur transport GO498_14325 PF17283 SprT-like zinc ribbon domain GO498_14325 PF10263 SprT-like family GO498_14330 PF01769 Divalent cation transporter GO498_14330 PF03448 MgtE intracellular N domain GO498_14330 PF00571 CBS domain GO498_14340 PF00970 Oxidoreductase FAD-binding domain GO498_14340 PF00175 Oxidoreductase NAD-binding domain GO498_14340 PF00111 2Fe-2S iron-sulfur cluster binding domain GO498_14345 PF03063 Prismane/CO dehydrogenase family GO498_14350 PF00171 Aldehyde dehydrogenase family GO498_14355 PF01235 Sodium:alanine symporter family GO498_14360 PF00654 Voltage gated chloride channel GO498_14365 PF03848 Tellurite resistance protein TehB GO498_14365 PF09313 Domain of unknown function (DUF1971) GO498_14370 PF07885 Ion channel GO498_14370 PF02254 TrkA-N domain GO498_14375 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family GO498_14380 PF04264 YceI-like domain GO498_14385 PF01292 Prokaryotic cytochrome b561 GO498_14400 PF05658 Head domain of trimeric autotransporter adhesin GO498_14400 PF05662 Coiled stalk of trimeric autotransporter adhesin GO498_14400 PF13018 Extended Signal Peptide of Type V secretion system GO498_14400 PF03895 YadA-like membrane anchor domain GO498_14410 PF00884 Sulfatase GO498_14425 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain GO498_14425 PF02278 Polysaccharide lyase family 8, super-sandwich domain GO498_14425 PF09093 Lyase, catalytic GO498_14425 PF09092 Lyase, N terminal GO498_14430 PF09092 Lyase, N terminal GO498_14430 PF09093 Lyase, catalytic GO498_14430 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain GO498_14430 PF02278 Polysaccharide lyase family 8, super-sandwich domain GO498_14445 PF04962 KduI/IolB family GO498_14450 PF01979 Amidohydrolase family GO498_14455 PF03610 PTS system fructose IIA component GO498_14455 PF03830 PTS system sorbose subfamily IIB component GO498_14460 PF03613 PTS system mannose/fructose/sorbose family IID component GO498_14465 PF03609 PTS system sorbose-specific iic component GO498_14470 PF03830 PTS system sorbose subfamily IIB component GO498_14475 PF01380 SIS domain GO498_14480 PF08013 Tagatose 6 phosphate kinase GO498_14485 PF08220 DeoR-like helix-turn-helix domain GO498_14485 PF00455 DeoR C terminal sensor domain GO498_14490 PF13186 Iron-sulfur cluster-binding domain GO498_14490 PF04055 Radical SAM superfamily GO498_14495 PF00884 Sulfatase GO498_14505 PF01116 Fructose-bisphosphate aldolase class-II GO498_14510 PF00294 pfkB family carbohydrate kinase GO498_14515 PF01081 KDPG and KHG aldolase GO498_14525 PF01266 FAD dependent oxidoreductase GO498_14530 PF02567 Phenazine biosynthesis-like protein GO498_14535 PF02040 Arsenical pump membrane protein GO498_14540 PF01022 Bacterial regulatory protein, arsR family GO498_14550 PF04229 GrpB protein GO498_14560 PF06440 DNA polymerase III, theta subunit GO498_14645 PF00717 Peptidase S24-like GO498_14645 PF01381 Helix-turn-helix GO498_14700 PF11924 Inverse autotransporter, beta-domain GO498_14700 PF02368 Bacterial Ig-like domain (group 2) GO498_14700 PF01476 LysM domain GO498_14700 PF07979 Intimin C-type lectin domain GO498_14700 PF02369 Bacterial Ig-like domain (group 1) GO498_14815 PF00772 DnaB-like helicase N terminal domain GO498_14815 PF03796 DnaB-like helicase C terminal domain GO498_14895 PF03837 RecT family GO498_14905 PF00436 Single-strand binding protein family GO498_14945 PF05063 MT-A70 GO498_14955 PF00589 Phage integrase family GO498_14965 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO498_14965 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO498_14975 PF00294 pfkB family carbohydrate kinase GO498_14980 PF01406 tRNA synthetases class I (C) catalytic domain GO498_14980 PF09190 DALR domain GO498_14985 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD GO498_14990 PF00149 Calcineurin-like phosphoesterase GO498_14995 PF00731 AIR carboxylase GO498_15000 PF02222 ATP-grasp domain GO498_15000 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain GO498_15010 PF00924 Mechanosensitive ion channel GO498_15020 PF00005 ABC transporter GO498_15025 PF13472 GDSL-like Lipase/Acylhydrolase family GO498_15030 PF00106 short chain dehydrogenase GO498_15035 PF00085 Thioredoxin GO498_15040 PF01145 SPFH domain / Band 7 family GO498_15040 PF16200 C-terminal region of band_7 GO498_15050 PF13411 MerR HTH family regulatory protein GO498_15055 PF00403 Heavy-metal-associated domain GO498_15065 PF01963 TraB family GO498_15070 PF04073 Aminoacyl-tRNA editing domain GO498_15075 PF00149 Calcineurin-like phosphoesterase GO498_15075 PF02872 5'-nucleotidase, C-terminal domain GO498_15080 PF02254 TrkA-N domain GO498_15080 PF00999 Sodium/hydrogen exchanger family GO498_15085 PF00294 pfkB family carbohydrate kinase GO498_15090 PF02706 Chain length determinant protein GO498_15095 PF00762 Ferrochelatase GO498_15100 PF05191 Adenylate kinase, active site lid GO498_15105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GO498_15105 PF00183 Hsp90 protein GO498_15110 PF02222 ATP-grasp domain GO498_15115 PF00892 EamA-like transporter family GO498_15120 PF00294 pfkB family carbohydrate kinase GO498_15125 PF08244 Glycosyl hydrolases family 32 C terminal GO498_15125 PF00251 Glycosyl hydrolases family 32 N-terminal domain GO498_15130 PF00356 Bacterial regulatory proteins, lacI family GO498_15130 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family GO498_15135 PF00196 Bacterial regulatory proteins, luxR family GO498_15135 PF00072 Response regulator receiver domain GO498_15160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GO498_15160 PF03466 LysR substrate binding domain GO498_15170 PF00696 Amino acid kinase family GO498_15175 PF11392 Protein of unknown function (DUF2877) GO498_15180 PF06545 Protein of unknown function (DUF1116) GO498_15185 PF00549 CoA-ligase GO498_15185 PF02629 CoA binding domain GO498_15190 PF00857 Isochorismatase family GO498_15195 PF02678 Pirin GO498_15195 PF05726 Pirin C-terminal cupin domain GO498_15200 PF03466 LysR substrate binding domain GO498_15200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GO498_15205 PF00939 Sodium:sulfate symporter transmembrane region GO498_15235 PF13954 PapC N-terminal domain GO498_15235 PF00577 Outer membrane usher protein GO498_15235 PF13953 PapC C-terminal domain GO498_15240 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain GO498_15240 PF02753 Pili assembly chaperone PapD, C-terminal domain GO498_15245 PF00419 Fimbrial protein GO498_15265 PF00419 Fimbrial protein GO498_15275 PF02753 Pili assembly chaperone PapD, C-terminal domain GO498_15275 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain GO498_15280 PF13954 PapC N-terminal domain GO498_15280 PF00577 Outer membrane usher protein GO498_15280 PF13953 PapC C-terminal domain GO498_15290 PF00419 Fimbrial protein GO498_15295 PF01381 Helix-turn-helix GO498_15300 PF02811 PHP domain GO498_15305 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 GO498_15305 PF00367 phosphotransferase system, EIIB GO498_15305 PF02378 Phosphotransferase system, EIIC GO498_15310 PF00874 PRD domain GO498_15310 PF03123 CAT RNA binding domain GO498_15315 PF13673 Acetyltransferase (GNAT) domain GO498_15320 PF05188 MutS domain II GO498_15320 PF05192 MutS domain III GO498_15320 PF05190 MutS family domain IV GO498_15320 PF00488 MutS domain V GO498_15320 PF01624 MutS domain I GO498_15325 PF04542 Sigma-70 region 2 GO498_15325 PF04539 Sigma-70 region 3 GO498_15325 PF04545 Sigma-70, region 4 GO498_15325 PF00140 Sigma-70 factor, region 1.2 GO498_15330 PF01551 Peptidase family M23 GO498_15330 PF01476 LysM domain GO498_15340 PF01975 Survival protein SurE GO498_15345 PF01142 tRNA pseudouridine synthase D (TruD) GO498_15350 PF02542 YgbB family GO498_15355 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO498_15360 PF04977 Septum formation initiator GO498_15370 PF00009 Elongation factor Tu GTP binding domain GO498_15375 PF01507 Phosphoadenosine phosphosulfate reductase family GO498_15380 PF14824 Sirohaem biosynthesis protein central GO498_15380 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases GO498_15380 PF10414 Sirohaem synthase dimerisation region GO498_15385 PF01507 Phosphoadenosine phosphosulfate reductase family GO498_15390 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain GO498_15390 PF01077 Nitrite and sulphite reductase 4Fe-4S domain GO498_15395 PF00258 Flavodoxin GO498_15395 PF00667 FAD binding domain GO498_15395 PF00175 Oxidoreductase NAD-binding domain GO498_15400 PF01242 6-pyruvoyl tetrahydropterin synthase GO498_15405 PF04055 Radical SAM superfamily GO498_15410 PF00324 Amino acid permease GO498_15415 PF01053 Cys/Met metabolism PLP-dependent enzyme GO498_15430 PF03372 Endonuclease/Exonuclease/phosphatase family GO498_15465 PF00005 ABC transporter GO498_15465 PF09383 NIL domain GO498_15470 PF00528 Binding-protein-dependent transport system inner membrane component GO498_15475 PF03180 NLPA lipoprotein GO498_15485 PF18389 TrmO C-terminal domain GO498_15485 PF01980 tRNA-methyltransferase O GO498_15490 PF04073 Aminoacyl-tRNA editing domain GO498_15490 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) GO498_15490 PF03129 Anticodon binding domain GO498_15495 PF17185 NlpE C-terminal OB domain GO498_15495 PF04170 NlpE N-terminal domain GO498_15500 PF07073 Modulator of Rho-dependent transcription termination (ROF) GO498_15505 PF01171 PP-loop family GO498_15505 PF11734 TilS substrate C-terminal domain GO498_15505 PF09179 TilS substrate binding domain GO498_15515 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit GO498_15520 PF01336 OB-fold nucleic acid binding domain GO498_15520 PF02811 PHP domain GO498_15520 PF14579 Helix-hairpin-helix motif GO498_15520 PF17657 Bacterial DNA polymerase III alpha subunit finger domain GO498_15520 PF07733 Bacterial DNA polymerase III alpha NTPase domain GO498_15525 PF01351 Ribonuclease HII GO498_15530 PF02684 Lipid-A-disaccharide synthetase GO498_15535 PF00132 Bacterial transferase hexapeptide (six repeats) GO498_15535 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 GO498_15540 PF07977 FabA-like domain GO498_15545 PF00132 Bacterial transferase hexapeptide (six repeats) GO498_15545 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD GO498_15550 PF03938 Outer membrane protein (OmpH-like) GO498_15555 PF01103 Surface antigen GO498_15555 PF07244 Surface antigen variable number repeat GO498_15560 PF17820 PDZ domain GO498_15560 PF02163 Peptidase family M50 GO498_15570 PF01255 Putative undecaprenyl diphosphate synthase GO498_15575 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain GO498_15575 PF13288 DXP reductoisomerase C-terminal domain GO498_15575 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO498_15580 PF01765 Ribosome recycling factor GO498_15585 PF00696 Amino acid kinase family GO498_15590 PF00889 Elongation factor TS GO498_15595 PF00318 Ribosomal protein S2 GO498_15600 PF00557 Metallopeptidase family M24 GO498_15605 PF01966 HD domain GO498_15605 PF01842 ACT domain GO498_15605 PF08335 GlnD PII-uridylyltransferase GO498_15610 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal GO498_15610 PF14602 Hexapeptide repeat of succinyl-transferase GO498_15615 PF11944 Protein of unknown function (DUF3461) GO498_15620 PF00258 Flavodoxin GO498_15630 PF00367 phosphotransferase system, EIIB GO498_15630 PF02378 Phosphotransferase system, EIIC GO498_15635 PF00849 RNA pseudouridylate synthase GO498_15635 PF04287 tRNA pseudouridine synthase C GO498_15640 PF04287 tRNA pseudouridine synthase C GO498_15645 PF07348 Syd protein (SUKH-2) GO498_15650 PF14489 QueF-like protein GO498_15650 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term GO498_15655 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases GO498_15655 PF11892 Domain of unknown function (DUF3412) GO498_15655 PF03641 Possible lysine decarboxylase GO498_15660 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain GO498_15660 PF01367 5'-3' exonuclease, C-terminal SAM fold GO498_15665 PF01728 FtsJ-like methyltransferase GO498_15665 PF18125 RlmM ferredoxin-like domain GO498_15670 PF04241 Protein of unknown function (DUF423) GO498_15675 PF03466 LysR substrate binding domain GO498_15675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GO498_15680 PF00266 Aminotransferase class-V GO498_15685 PF02657 Fe-S metabolism associated domain GO498_15690 PF00899 ThiF family GO498_15695 PF03562 MltA specific insert domain GO498_15695 PF06725 3D domain GO498_15715 PF01520 N-acetylmuramoyl-L-alanine amidase GO498_15715 PF11741 AMIN domain GO498_15720 PF00583 Acetyltransferase (GNAT) family GO498_15720 PF00696 Amino acid kinase family GO498_15725 PF13538 UvrD-like helicase C-terminal domain GO498_15730 PF12705 PD-(D/E)XK nuclease superfamily GO498_15730 PF00580 UvrD/REP helicase N-terminal domain GO498_15730 PF13361 UvrD-like helicase C-terminal domain GO498_15735 PF05193 Peptidase M16 inactive domain GO498_15735 PF00675 Insulinase (Peptidase family M16) GO498_15735 PF16187 Middle or third domain of peptidase_M16 GO498_15740 PF17946 RecC C-terminal domain GO498_15780 PF01790 Prolipoprotein diacylglyceryl transferase GO498_15785 PF00391 PEP-utilising enzyme, mobile domain GO498_15785 PF05524 PEP-utilising enzyme, N-terminal GO498_15785 PF02896 PEP-utilising enzyme, TIM barrel domain GO498_15785 PF01590 GAF domain GO498_15790 PF00293 NUDIX domain GO498_15800 PF00528 Binding-protein-dependent transport system inner membrane component GO498_15805 PF00005 ABC transporter GO498_15810 PF12728 Helix-turn-helix domain GO498_15820 PF00136 DNA polymerase family B GO498_15820 PF03104 DNA polymerase family B, exonuclease domain GO498_15825 PF18337 RapA N-terminal Tudor like domain GO498_15825 PF18339 RapA N-terminal Tudor like domain 1 GO498_15825 PF00176 SNF2 family N-terminal domain GO498_15825 PF12137 RNA polymerase recycling family C-terminal GO498_15825 PF00271 Helicase conserved C-terminal domain GO498_15830 PF00849 RNA pseudouridylate synthase GO498_15835 PF05099 Tellurite resistance protein TerB GO498_15835 PF00226 DnaJ domain GO498_15840 PF03968 OstA-like protein GO498_15840 PF04453 LPS transport system D GO498_15845 PF09312 SurA N-terminal domain GO498_15850 PF04166 Pyridoxal phosphate biosynthetic protein PdxA GO498_15855 PF00398 Ribosomal RNA adenine dimethylase GO498_15860 PF04379 ApaG domain GO498_15865 PF00149 Calcineurin-like phosphoesterase GO498_15870 PF00186 Dihydrofolate reductase GO498_15880 PF00082 Subtilase family GO498_15880 PF03797 Autotransporter beta-domain GO498_15880 PF12951 Passenger-associated-transport-repeat GO498_15885 PF07731 Multicopper oxidase GO498_15885 PF07732 Multicopper oxidase GO498_15890 PF01553 Acyltransferase GO498_15895 PF03989 DNA gyrase C-terminal domain, beta-propeller GO498_15895 PF00521 DNA gyrase/topoisomerase IV, subunit A GO498_15900 PF00204 DNA gyrase B GO498_15900 PF00986 DNA gyrase B subunit, carboxyl terminus GO498_15900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GO498_15900 PF01751 Toprim domain GO498_15905 PF05728 Uncharacterised protein family (UPF0227) GO498_15910 PF00149 Calcineurin-like phosphoesterase GO498_15915 PF00293 NUDIX domain GO498_15920 PF02321 Outer membrane efflux protein GO498_15925 PF06693 Protein of unknown function (DUF1190) GO498_15930 PF03738 Glutathionylspermidine synthase preATP-grasp GO498_15935 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase GO498_15940 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase GO498_15945 PF04380 Membrane fusogenic activity GO498_15950 PF01467 Cytidylyltransferase-like GO498_15950 PF00294 pfkB family carbohydrate kinase GO498_15955 PF03710 Glutamate-ammonia ligase adenylyltransferase GO498_15955 PF08335 GlnD PII-uridylyltransferase GO498_15960 PF01928 CYTH domain GO498_15965 PF08239 Bacterial SH3 domain GO498_15970 PF12627 Probable RNA and SrmB- binding site of polymerase A GO498_15970 PF01743 Poly A polymerase head domain GO498_15970 PF01966 HD domain GO498_15975 PF02152 Dihydroneopterin aldolase GO498_15980 PF02660 Glycerol-3-phosphate acyltransferase GO498_16000 PF01474 Class-II DAHP synthetase family GO498_16005 PF00814 Glycoprotease family GO498_16010 PF01165 Ribosomal protein S21 GO498_16015 PF10410 DnaB-helicase binding domain of primase GO498_16015 PF08278 DNA primase DnaG DnaB-binding GO498_16015 PF08275 DNA primase catalytic core, N-terminal domain GO498_16015 PF01807 CHC2 zinc finger GO498_16020 PF04545 Sigma-70, region 4 GO498_16020 PF00140 Sigma-70 factor, region 1.2 GO498_16020 PF03979 Sigma-70 factor, region 1.1 GO498_16020 PF04546 Sigma-70, non-essential region GO498_16020 PF04539 Sigma-70 region 3 GO498_16020 PF04542 Sigma-70 region 2 GO498_16035 PF01062 Bestrophin, RFP-TM, chloride channel GO498_16045 PF02322 Cytochrome bd terminal oxidase subunit II GO498_16050 PF01654 Cytochrome bd terminal oxidase subunit I GO498_16055 PF00384 Molybdopterin oxidoreductase GO498_16060 PF03466 LysR substrate binding domain GO498_16060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GO498_16065 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GO498_16065 PF02203 Tar ligand binding domain homologue GO498_16065 PF00672 HAMP domain GO498_16070 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GO498_16070 PF00672 HAMP domain GO498_16070 PF02203 Tar ligand binding domain homologue GO498_16080 PF02342 TerD domain GO498_16085 PF02342 TerD domain GO498_16090 PF03741 Integral membrane protein TerC family GO498_16095 PF05099 Tellurite resistance protein TerB GO498_16100 PF02342 TerD domain GO498_16105 PF02342 TerD domain GO498_16120 PF11202 Phosphoribosyl transferase (PRTase) GO498_16120 PF15608 PELOTA RNA binding domain GO498_16155 PF02909 Tetracyclin repressor-like, C-terminal domain GO498_16155 PF00440 Bacterial regulatory proteins, tetR family GO498_16160 PF07690 Major Facilitator Superfamily GO498_16175 PF02733 Dak1 domain GO498_16180 PF02734 DAK2 domain GO498_16185 PF05524 PEP-utilising enzyme, N-terminal GO498_16185 PF03610 PTS system fructose IIA component GO498_16185 PF00381 PTS HPr component phosphorylation site GO498_16185 PF00391 PEP-utilising enzyme, mobile domain GO498_16190 PF00072 Response regulator receiver domain GO498_16190 PF02954 Bacterial regulatory protein, Fis family GO498_16190 PF14532 Sigma-54 interaction domain GO498_16195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GO498_16195 PF00512 His Kinase A (phospho-acceptor) domain GO498_16195 PF02743 Cache domain GO498_16205 PF07690 Major Facilitator Superfamily GO498_16210 PF02887 Pyruvate kinase, alpha/beta domain GO498_16210 PF00224 Pyruvate kinase, barrel domain GO498_16215 PF01258 Prokaryotic dksA/traR C4-type zinc finger GO498_16225 PF03600 Citrate transporter GO498_16230 PF01048 Phosphorylase superfamily GO498_16235 PF01676 Metalloenzyme superfamily GO498_16240 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain GO498_16240 PF02885 Glycosyl transferase family, helical bundle domain GO498_16240 PF00591 Glycosyl transferase family, a/b domain GO498_16245 PF01791 DeoC/LacD family aldolase GO498_16250 PF07662 Na+ dependent nucleoside transporter C-terminus GO498_16250 PF07670 Nucleoside recognition GO498_16250 PF01773 Na+ dependent nucleoside transporter N-terminus GO498_16255 PF01026 TatD related DNase GO498_16260 PF01734 Patatin-like phospholipase GO498_16270 PF16658 Class II release factor RF3, C-terminal domain GO498_16270 PF03144 Elongation factor Tu domain 2 GO498_16270 PF00009 Elongation factor Tu GTP binding domain GO498_16285 PF00583 Acetyltransferase (GNAT) family GO498_16295 PF08468 Methyltransferase small domain N-terminal GO498_16295 PF05175 Methyltransferase small domain GO498_16310 PF02690 Na+/Pi-cotransporter GO498_16315 PF00245 Alkaline phosphatase GO498_16320 PF00756 Putative esterase GO498_16320 PF11806 Domain of unknown function (DUF3327) GO498_16330 PF13521 AAA domain GO498_16330 PF01381 Helix-turn-helix GO498_16335 PF18073 Rubredoxin metal binding domain GO498_16340 PF18429 Domain of unknown function (DUF5609) GO498_16345 PF10144 Bacterial virulence factor haemolysin GO498_16350 PF11230 Protein of unknown function (DUF3029) GO498_16355 PF04055 Radical SAM superfamily GO498_16365 PF00005 ABC transporter GO498_16370 PF00005 ABC transporter GO498_16375 PF12911 N-terminal TM domain of oligopeptide transport permease C GO498_16375 PF00528 Binding-protein-dependent transport system inner membrane component GO498_16380 PF00528 Binding-protein-dependent transport system inner membrane component GO498_16385 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GO498_16390 PF00535 Glycosyl transferase family 2 GO498_16395 PF01750 Hydrogenase maturation protease GO498_16400 PF07450 Formate hydrogenlyase maturation protein HycH GO498_16405 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit GO498_16410 PF12838 4Fe-4S dicluster domain GO498_16415 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit GO498_16415 PF00374 Nickel-dependent hydrogenase GO498_16415 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit GO498_16420 PF00361 Proton-conducting membrane transporter GO498_16420 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus GO498_16425 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L GO498_16430 PF00361 Proton-conducting membrane transporter GO498_16430 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus GO498_16435 PF00146 NADH dehydrogenase GO498_16440 PF00361 Proton-conducting membrane transporter GO498_16445 PF00037 4Fe-4S binding domain GO498_16445 PF12798 4Fe-4S binding domain GO498_16450 PF02502 Ribose/Galactose Isomerase GO498_16455 PF08207 Elongation factor P (EF-P) KOW-like domain GO498_16455 PF09285 Elongation factor P, C-terminal GO498_16455 PF01132 Elongation factor P (EF-P) OB domain GO498_16460 PF04055 Radical SAM superfamily GO498_16470 PF13954 PapC N-terminal domain GO498_16470 PF13953 PapC C-terminal domain GO498_16470 PF00577 Outer membrane usher protein GO498_16475 PF02753 Pili assembly chaperone PapD, C-terminal domain GO498_16475 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain GO498_16480 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain GO498_16480 PF02753 Pili assembly chaperone PapD, C-terminal domain GO498_16495 PF02753 Pili assembly chaperone PapD, C-terminal domain GO498_16495 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain GO498_16505 PF13460 NAD(P)H-binding GO498_16510 PF13698 Domain of unknown function (DUF4156) GO498_16515 PF12323 Helix-turn-helix domain GO498_16515 PF01385 Probable transposase GO498_16515 PF07282 Putative transposase DNA-binding domain GO498_16520 PF01797 Transposase IS200 like GO498_16525 PF00118 TCP-1/cpn60 chaperonin family GO498_16530 PF00166 Chaperonin 10 Kd subunit GO498_16535 PF04186 FxsA cytoplasmic membrane protein GO498_16540 PF10415 Fumarase C C-terminus GO498_16540 PF00206 Lyase GO498_16545 PF03605 Anaerobic c4-dicarboxylate membrane transporter GO498_16560 PF02899 Phage integrase, N-terminal SAM-like domain GO498_16560 PF00589 Phage integrase family GO498_16785 PF00593 TonB dependent receptor GO498_16785 PF07715 TonB-dependent Receptor Plug Domain GO498_16790 PF07690 Major Facilitator Superfamily GO498_16800 PF00668 Condensation domain GO498_16800 PF08242 Methyltransferase domain GO498_16800 PF00550 Phosphopantetheine attachment site GO498_16800 PF00501 AMP-binding enzyme GO498_16805 PF00550 Phosphopantetheine attachment site GO498_16805 PF00109 Beta-ketoacyl synthase, N-terminal domain GO498_16805 PF02801 Beta-ketoacyl synthase, C-terminal domain GO498_16805 PF00668 Condensation domain GO498_16805 PF16197 Ketoacyl-synthetase C-terminal extension GO498_16805 PF00698 Acyl transferase domain GO498_16815 PF00975 Thioesterase domain GO498_16820 PF00005 ABC transporter GO498_16820 PF00664 ABC transporter transmembrane region GO498_16825 PF00005 ABC transporter GO498_16825 PF00664 ABC transporter transmembrane region GO498_16830 PF01648 4'-phosphopantetheinyl transferase superfamily GO498_16875 PF00593 TonB dependent receptor GO498_16875 PF07715 TonB-dependent Receptor Plug Domain GO498_16890 PF04224 Protein of unknown function, DUF417 GO498_16905 PF16970 Type-1 fimbrial protein, A GO498_16915 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain GO498_16915 PF01276 Orn/Lys/Arg decarboxylase, major domain GO498_16915 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain GO498_16930 PF04754 Putative transposase, YhgA-like GO498_16950 PF01751 Toprim domain GO498_16950 PF01131 DNA topoisomerase GO498_16995 PF03796 DnaB-like helicase C terminal domain GO498_16995 PF00772 DnaB-like helicase N terminal domain GO498_17010 PF13614 AAA domain GO498_17020 PF04536 TPM domain GO498_17025 PF04011 LemA family GO498_17040 PF17864 RuvB AAA lid domain GO498_17040 PF05496 Holliday junction DNA helicase RuvB P-loop domain GO498_17040 PF05491 RuvB C-terminal winged helix domain GO498_17045 PF00083 Sugar (and other) transporter GO498_17055 PF01494 FAD binding domain GO498_17060 PF00766 Electron transfer flavoprotein FAD-binding domain GO498_17060 PF01012 Electron transfer flavoprotein domain GO498_17065 PF01012 Electron transfer flavoprotein domain GO498_17070 PF02028 BCCT, betaine/carnitine/choline family transporter GO498_17075 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GO498_17075 PF02770 Acyl-CoA dehydrogenase, middle domain GO498_17075 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GO498_17080 PF02515 CoA-transferase family III GO498_17085 PF13193 AMP-binding enzyme C-terminal domain GO498_17085 PF00501 AMP-binding enzyme GO498_17090 PF00378 Enoyl-CoA hydratase/isomerase GO498_17095 PF00132 Bacterial transferase hexapeptide (six repeats) GO498_17100 PF07180 CaiF/GrlA transcriptional regulator GO498_17105 PF00923 Transaldolase/Fructose-6-phosphate aldolase GO498_17110 PF18416 N-acetylglucosamine binding protein domain 2 GO498_17110 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading GO498_17115 PF02631 RecX family GO498_17135 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase GO498_17140 PF03062 MBOAT, membrane-bound O-acyltransferase family GO498_17160 PF02447 GntP family permease GO498_17165 PF01202 Shikimate kinase GO498_17170 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family GO498_17170 PF00356 Bacterial regulatory proteins, lacI family GO498_17185 PF00005 ABC transporter GO498_17190 PF13649 Methyltransferase domain GO498_17195 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain GO498_17195 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain GO498_17220 PF07720 Tetratricopeptide repeat GO498_17225 PF01312 FlhB HrpN YscU SpaS Family GO498_17230 PF01311 Bacterial export proteins, family 1 GO498_17235 PF01313 Bacterial export proteins, family 3 GO498_17240 PF00813 FliP family GO498_17260 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GO498_17260 PF18269 T3SS EscN ATPase C-terminal domain GO498_17260 PF02874 ATP synthase alpha/beta family, beta-barrel domain GO498_17270 PF00771 FHIPEP family GO498_17275 PF07201 HrpJ-like domain GO498_17285 PF12833 Helix-turn-helix domain GO498_17295 PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF GO498_17305 PF01514 Secretory protein of YscJ/FliF family GO498_17325 PF09278 MerR, DNA binding GO498_17325 PF00376 MerR family regulatory protein GO498_17340 PF00873 AcrB/AcrD/AcrF family GO498_17350 PF00893 Small Multidrug Resistance protein GO498_17355 PF00893 Small Multidrug Resistance protein GO498_17365 PF06130 Phosphate propanoyltransferase GO498_17370 PF00936 BMC domain GO498_17375 PF04055 Radical SAM superfamily GO498_17375 PF13187 4Fe-4S dicluster domain GO498_17380 PF01228 Glycine radical GO498_17380 PF02901 Pyruvate formate lyase-like GO498_17385 PF00465 Iron-containing alcohol dehydrogenase GO498_17390 PF03319 Ethanolamine utilisation protein EutN/carboxysome GO498_17395 PF00465 Iron-containing alcohol dehydrogenase GO498_17395 PF00171 Aldehyde dehydrogenase family GO498_17400 PF00936 BMC domain GO498_17405 PF00936 BMC domain GO498_17410 PF00936 BMC domain GO498_17430 PF01053 Cys/Met metabolism PLP-dependent enzyme GO498_17435 PF00892 EamA-like transporter family GO498_17440 PF00419 Fimbrial protein GO498_17445 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain GO498_17445 PF02753 Pili assembly chaperone PapD, C-terminal domain GO498_17450 PF13953 PapC C-terminal domain GO498_17450 PF13954 PapC N-terminal domain GO498_17450 PF00577 Outer membrane usher protein GO498_17455 PF00419 Fimbrial protein GO498_17460 PF00419 Fimbrial protein GO498_17460 PF09222 Fimbrial adhesin F17-AG, lectin domain GO498_17465 PF01381 Helix-turn-helix GO498_17470 PF13416 Bacterial extracellular solute-binding protein GO498_17475 PF00528 Binding-protein-dependent transport system inner membrane component GO498_17480 PF00528 Binding-protein-dependent transport system inner membrane component GO498_17485 PF00005 ABC transporter GO498_17485 PF08402 TOBE domain GO498_17500 PF01207 Dihydrouridine synthase (Dus) GO498_17505 PF00107 Zinc-binding dehydrogenase GO498_17505 PF08240 Alcohol dehydrogenase GroES-like domain GO498_17510 PF00772 DnaB-like helicase N terminal domain GO498_17510 PF03796 DnaB-like helicase C terminal domain GO498_17515 PF00842 Alanine racemase, C-terminal domain GO498_17515 PF01168 Alanine racemase, N-terminal domain GO498_17520 PF00155 Aminotransferase class I and II GO498_17525 PF03313 Serine dehydratase alpha chain GO498_17535 PF17760 UvrA interaction domain GO498_17535 PF17755 UvrA DNA-binding domain GO498_17535 PF00005 ABC transporter GO498_17540 PF00436 Single-strand binding protein family GO498_17545 PF01475 Ferric uptake regulator family GO498_17550 PF00717 Peptidase S24-like GO498_17550 PF01726 LexA DNA binding domain GO498_17555 PF01219 Prokaryotic diacylglycerol kinase GO498_17560 PF01553 Acyltransferase GO498_17565 PF01040 UbiA prenyltransferase family GO498_17570 PF04345 Chorismate lyase GO498_17575 PF00342 Phosphoglucose isomerase GO498_17580 PF00696 Amino acid kinase family GO498_17580 PF01842 ACT domain GO498_17595 PF02574 Homocysteine S-methyltransferase GO498_17595 PF02310 B12 binding domain GO498_17595 PF02607 B12 binding domain GO498_17595 PF02965 Vitamin B12 dependent methionine synthase, activation domain GO498_17595 PF00809 Pterin binding enzyme GO498_17600 PF01614 Bacterial transcriptional regulator GO498_17600 PF09339 IclR helix-turn-helix domain GO498_17605 PF00920 Dehydratase family GO498_17610 PF01081 KDPG and KHG aldolase GO498_17615 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) GO498_17620 PF00463 Isocitrate lyase family GO498_17625 PF01274 Malate synthase GO498_17630 PF04204 Homoserine O-succinyltransferase GO498_17635 PF00465 Iron-containing alcohol dehydrogenase GO498_17640 PF00293 NUDIX domain GO498_17670 PF02142 MGS-like domain GO498_17670 PF01808 AICARFT/IMPCHase bienzyme GO498_17675 PF02844 Phosphoribosylglycinamide synthetase, N domain GO498_17675 PF02843 Phosphoribosylglycinamide synthetase, C domain GO498_17675 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain GO498_17680 PF07356 Protein of unknown function (DUF1481) GO498_17685 PF00216 Bacterial DNA-binding protein GO498_17690 PF04222 Protein of unknown function (DUF416) GO498_17695 PF04493 Endonuclease V GO498_17700 PF01208 Uroporphyrinogen decarboxylase (URO-D) GO498_17705 PF09297 NADH pyrophosphatase zinc ribbon domain GO498_17705 PF00293 NUDIX domain GO498_17715 PF01964 Radical SAM ThiC family GO498_17715 PF13667 ThiC-associated domain GO498_17720 PF02581 Thiamine monophosphate synthase GO498_17725 PF00899 ThiF family GO498_17730 PF02597 ThiS family GO498_17735 PF05690 Thiazole biosynthesis protein ThiG GO498_17740 PF04055 Radical SAM superfamily GO498_17740 PF06968 Biotin and Thiamin Synthesis associated domain GO498_17745 PF04754 Putative transposase, YhgA-like GO498_17750 PF04997 RNA polymerase Rpb1, domain 1 GO498_17750 PF00623 RNA polymerase Rpb1, domain 2 GO498_17750 PF04983 RNA polymerase Rpb1, domain 3 GO498_17750 PF04998 RNA polymerase Rpb1, domain 5 GO498_17750 PF05000 RNA polymerase Rpb1, domain 4 GO498_17755 PF00562 RNA polymerase Rpb2, domain 6 GO498_17755 PF04561 RNA polymerase Rpb2, domain 2 GO498_17755 PF04563 RNA polymerase beta subunit GO498_17755 PF10385 RNA polymerase beta subunit external 1 domain GO498_17755 PF04565 RNA polymerase Rpb2, domain 3 GO498_17755 PF04560 RNA polymerase Rpb2, domain 7 GO498_17760 PF00542 Ribosomal protein L7/L12 C-terminal domain GO498_17760 PF16320 Ribosomal protein L7/L12 dimerisation domain GO498_17765 PF00466 Ribosomal protein L10 GO498_17770 PF00687 Ribosomal protein L1p/L10e family GO498_17775 PF03946 Ribosomal protein L11, N-terminal domain GO498_17775 PF00298 Ribosomal protein L11, RNA binding domain GO498_17780 PF00467 KOW motif GO498_17780 PF02357 Transcription termination factor nusG GO498_17785 PF00584 SecE/Sec61-gamma subunits of protein translocation complex GO498_17790 PF00009 Elongation factor Tu GTP binding domain GO498_17790 PF03143 Elongation factor Tu C-terminal domain GO498_17790 PF03144 Elongation factor Tu domain 2 GO498_17795 PF00679 Elongation factor G C-terminus GO498_17795 PF00009 Elongation factor Tu GTP binding domain GO498_17795 PF03144 Elongation factor Tu domain 2 GO498_17795 PF14492 Elongation Factor G, domain II GO498_17795 PF03764 Elongation factor G, domain IV GO498_17800 PF00177 Ribosomal protein S7p/S5e GO498_17805 PF00164 Ribosomal protein S12/S23 GO498_17810 PF04077 DsrH like protein GO498_17815 PF02635 DsrE/DsrF-like family GO498_17820 PF02635 DsrE/DsrF-like family GO498_17825 PF08348 YheO-like PAS domain GO498_17825 PF13309 HTH domain GO498_17835 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase GO498_17835 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase GO498_17840 PF04102 SlyX GO498_17845 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase GO498_17850 PF09526 Probable metal-binding protein (DUF2387) GO498_17855 PF00999 Sodium/hydrogen exchanger family GO498_17855 PF02254 TrkA-N domain GO498_17860 PF02525 Flavodoxin-like fold GO498_17865 PF00005 ABC transporter GO498_17865 PF12848 ABC transporter GO498_17870 PF00672 HAMP domain GO498_17870 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GO498_17870 PF02203 Tar ligand binding domain homologue GO498_17875 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GO498_17875 PF02203 Tar ligand binding domain homologue GO498_17875 PF00672 HAMP domain GO498_17880 PF08447 PAS fold GO498_17880 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GO498_17885 PF01380 SIS domain GO498_17885 PF01418 Helix-turn-helix domain, rpiR family GO498_17895 PF00561 alpha/beta hydrolase fold GO498_17900 PF06794 Uncharacterised protein family (UPF0270) GO498_17905 PF00485 Phosphoribulokinase / Uridine kinase family GO498_17910 PF02566 OsmC-like protein GO498_17915 PF00027 Cyclic nucleotide-binding domain GO498_17915 PF13545 Crp-like helix-turn-helix domain GO498_17920 PF00202 Aminotransferase class-III GO498_17925 PF00117 Glutamine amidotransferase class-I GO498_17930 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD GO498_17935 PF01926 50S ribosome-binding GTPase GO498_17940 PF01327 Polypeptide deformylase GO498_17945 PF01612 3'-5' exonuclease GO498_17945 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain GO498_17945 PF01367 5'-3' exonuclease, C-terminal SAM fold GO498_17945 PF00476 DNA polymerase family A GO498_17955 PF01323 DSBA-like thioredoxin domain GO498_17960 PF01636 Phosphotransferase enzyme family GO498_17965 PF06288 Protein of unknown function (DUF1040) GO498_17970 PF12804 MobA-like NTP transferase domain GO498_17975 PF03205 Molybdopterin guanine dinucleotide synthesis protein B GO498_17985 PF01266 FAD dependent oxidoreductase GO498_17990 PF07992 Pyridine nucleotide-disulphide oxidoreductase GO498_17990 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO498_17995 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ GO498_18005 PF03631 Virulence factor BrkB GO498_18010 PF01361 Tautomerase enzyme GO498_18015 PF00675 Insulinase (Peptidase family M16) GO498_18015 PF05193 Peptidase M16 inactive domain GO498_18020 PF17154 Gammaproteobacterial periplasmic sensor domain GO498_18020 PF00672 HAMP domain GO498_18020 PF00990 Diguanylate cyclase, GGDEF domain GO498_18020 PF00563 EAL domain GO498_18025 PF05594 Haemagluttinin repeat GO498_18025 PF04829 Pre-toxin domain with VENN motif GO498_18025 PF13332 Hemagglutinin repeat GO498_18025 PF15526 Novel toxin 21 GO498_18025 PF05860 haemagglutination activity domain GO498_18030 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GO498_18030 PF00005 ABC transporter GO498_18035 PF00005 ABC transporter GO498_18035 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GO498_18040 PF12911 N-terminal TM domain of oligopeptide transport permease C GO498_18040 PF00528 Binding-protein-dependent transport system inner membrane component GO498_18045 PF00528 Binding-protein-dependent transport system inner membrane component GO498_18050 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GO498_18055 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB GO498_18055 PF08479 POTRA domain, ShlB-type GO498_18055 PF17287 POTRA domain GO498_18070 PF07119 Protein of unknown function (DUF1375) GO498_18075 PF02080 TrkA-C domain GO498_18075 PF06826 Predicted Permease Membrane Region GO498_18080 PF00155 Aminotransferase class I and II GO498_18085 PF03352 Methyladenine glycosylase GO498_18090 PF02091 Glycyl-tRNA synthetase alpha subunit GO498_18095 PF05746 DALR anticodon binding domain GO498_18095 PF02092 Glycyl-tRNA synthetase beta subunit GO498_18120 PF12566 Protein of unknown function (DUF3748) GO498_18120 PF07676 WD40-like Beta Propeller Repeat GO498_18125 PF03458 UPF0126 domain GO498_18130 PF00625 Guanylate kinase GO498_18135 PF01192 RNA polymerase Rpb6 GO498_18140 PF04607 Region found in RelA / SpoT proteins GO498_18140 PF13291 ACT domain GO498_18140 PF02824 TGS domain GO498_18145 PF00588 SpoU rRNA Methylase family GO498_18145 PF12105 SpoU, rRNA methylase, C-terminal GO498_18150 PF17191 RecG wedge domain GO498_18150 PF00271 Helicase conserved C-terminal domain GO498_18150 PF00270 DEAD/DEAH box helicase GO498_18155 PF03616 Sodium/glutamate symporter GO498_18160 PF00860 Permease family GO498_18165 PF05170 AsmA family GO498_18175 PF00849 RNA pseudouridylate synthase GO498_18175 PF01479 S4 domain GO498_18180 PF09500 Putative thioesterase (yiiD_Cterm) GO498_18180 PF00583 Acetyltransferase (GNAT) family GO498_18185 PF02580 D-Tyr-tRNA(Tyr) deacylase GO498_18190 PF13419 Haloacid dehalogenase-like hydrolase GO498_18215 PF03951 Glutamine synthetase, beta-Grasp domain GO498_18215 PF00120 Glutamine synthetase, catalytic domain GO498_18220 PF00512 His Kinase A (phospho-acceptor) domain GO498_18220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GO498_18225 PF02954 Bacterial regulatory protein, Fis family GO498_18225 PF00072 Response regulator receiver domain GO498_18225 PF00158 Sigma-54 interaction domain GO498_18230 PF04055 Radical SAM superfamily GO498_18230 PF06969 HemN C-terminal domain GO498_18235 PF05643 Putative bacterial lipoprotein (DUF799) GO498_18245 PF03783 Curli production assembly/transport component CsgG GO498_18250 PF00575 S1 RNA binding domain GO498_18250 PF09371 Tex-like protein N-terminal domain GO498_18250 PF16921 Tex protein YqgF-like domain GO498_18250 PF17674 HHH domain GO498_18255 PF03449 Transcription elongation factor, N-terminal GO498_18255 PF01272 Transcription elongation factor, GreA/GreB, C-term GO498_18260 PF00486 Transcriptional regulatory protein, C terminal GO498_18260 PF00072 Response regulator receiver domain GO498_18265 PF00672 HAMP domain GO498_18265 PF00512 His Kinase A (phospho-acceptor) domain GO498_18265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GO498_18270 PF12849 PBP superfamily domain GO498_18275 PF00528 Binding-protein-dependent transport system inner membrane component GO498_18280 PF00528 Binding-protein-dependent transport system inner membrane component GO498_18285 PF00005 ABC transporter GO498_18290 PF01895 PhoU domain GO498_18295 PF00497 Bacterial extracellular solute-binding proteins, family 3 GO498_18305 PF00528 Binding-protein-dependent transport system inner membrane component GO498_18330 PF00005 ABC transporter GO498_18345 PF00109 Beta-ketoacyl synthase, N-terminal domain GO498_18345 PF02801 Beta-ketoacyl synthase, C-terminal domain GO498_18350 PF08669 Glycine cleavage T-protein C-terminal barrel domain GO498_18350 PF01571 Aminomethyltransferase folate-binding domain GO498_18355 PF00550 Phosphopantetheine attachment site GO498_18360 PF07977 FabA-like domain GO498_18365 PF00106 short chain dehydrogenase GO498_18370 PF01648 4'-phosphopantetheinyl transferase superfamily GO498_18375 PF14436 Bacterial EndoU nuclease GO498_18375 PF13332 Hemagglutinin repeat GO498_18375 PF04829 Pre-toxin domain with VENN motif GO498_18375 PF05860 haemagglutination activity domain GO498_18375 PF05594 Haemagluttinin repeat GO498_18380 PF00860 Permease family GO498_18395 PF04220 Der GTPase activator (YihI) GO498_18405 PF04023 FeoA domain GO498_18410 PF17910 FeoB cytosolic helical domain GO498_18410 PF07664 Ferrous iron transport protein B C terminus GO498_18410 PF07670 Nucleoside recognition GO498_18410 PF02421 Ferrous iron transport protein B GO498_18415 PF09012 FeoC like transcriptional regulator GO498_18425 PF00561 alpha/beta hydrolase fold GO498_18430 PF00156 Phosphoribosyl transferase domain GO498_18435 PF01521 Iron-sulphur cluster biosynthesis GO498_18435 PF01106 NifU-like domain GO498_18440 PF00581 Rhodanese-like domain GO498_18445 PF01694 Rhomboid family GO498_18445 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease GO498_18450 PF08220 DeoR-like helix-turn-helix domain GO498_18450 PF00455 DeoR C terminal sensor domain GO498_18455 PF01266 FAD dependent oxidoreductase GO498_18455 PF16901 C-terminal domain of alpha-glycerophosphate oxidase GO498_18460 PF04343 Protein of unknown function, DUF488 GO498_18465 PF02219 Methylenetetrahydrofolate reductase GO498_18475 PF00356 Bacterial regulatory proteins, lacI family GO498_18480 PF01970 Tripartite tricarboxylate transporter TctA family GO498_18490 PF03401 Tripartite tricarboxylate transporter family receptor GO498_18500 PF00701 Dihydrodipicolinate synthetase family GO498_18510 PF02782 FGGY family of carbohydrate kinases, C-terminal domain GO498_18510 PF00370 FGGY family of carbohydrate kinases, N-terminal domain GO498_18520 PF00005 ABC transporter GO498_18525 PF00005 ABC transporter GO498_18530 PF00528 Binding-protein-dependent transport system inner membrane component GO498_18530 PF12911 N-terminal TM domain of oligopeptide transport permease C GO498_18535 PF00528 Binding-protein-dependent transport system inner membrane component GO498_18540 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GO498_18545 PF12697 Alpha/beta hydrolase family GO498_18545 PF08241 Methyltransferase domain GO498_18555 PF13505 Outer membrane protein beta-barrel domain GO498_18560 PF04794 YdjC-like protein GO498_18565 PF02056 Family 4 glycosyl hydrolase GO498_18565 PF11975 Family 4 glycosyl hydrolase C-terminal domain GO498_18570 PF12833 Helix-turn-helix domain GO498_18570 PF07883 Cupin domain GO498_18575 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit GO498_18580 PF02378 Phosphotransferase system, EIIC GO498_18585 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit GO498_18590 PF01497 Periplasmic binding protein GO498_18595 PF01032 FecCD transport family GO498_18600 PF01032 FecCD transport family GO498_18605 PF00005 ABC transporter GO498_18615 PF07690 Major Facilitator Superfamily GO498_18620 PF13378 Enolase C-terminal domain-like GO498_18620 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain GO498_18625 PF00392 Bacterial regulatory proteins, gntR family GO498_18625 PF07729 FCD domain GO498_18635 PF00294 pfkB family carbohydrate kinase GO498_18640 PF01081 KDPG and KHG aldolase GO498_18650 PF07690 Major Facilitator Superfamily GO498_18660 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain GO498_18660 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain GO498_18660 PF01276 Orn/Lys/Arg decarboxylase, major domain GO498_18665 PF13520 Amino acid permease GO498_18675 PF04879 Molybdopterin oxidoreductase Fe4S4 domain GO498_18675 PF01568 Molydopterin dinucleotide binding domain GO498_18675 PF00384 Molybdopterin oxidoreductase GO498_18680 PF13247 4Fe-4S dicluster domain GO498_18680 PF12800 4Fe-4S binding domain GO498_18685 PF04976 DMSO reductase anchor subunit (DmsC) GO498_18690 PF00356 Bacterial regulatory proteins, lacI family GO498_18690 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family GO498_18700 PF03825 Nucleoside H+ symporter GO498_18705 PF02308 MgtC family GO498_18720 PF00701 Dihydrodipicolinate synthetase family GO498_18725 PF01418 Helix-turn-helix domain, rpiR family GO498_18725 PF01380 SIS domain GO498_18730 PF04074 YhcH/YjgK/YiaL GO498_18735 PF00474 Sodium:solute symporter family GO498_18740 PF00480 ROK family GO498_18745 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase GO498_18750 PF04879 Molybdopterin oxidoreductase Fe4S4 domain GO498_18750 PF00384 Molybdopterin oxidoreductase GO498_18750 PF01568 Molydopterin dinucleotide binding domain GO498_18755 PF00209 Sodium:neurotransmitter symporter family GO498_18760 PF10397 Adenylosuccinate lyase C-terminus GO498_18760 PF00206 Lyase GO498_18765 PF00367 phosphotransferase system, EIIB GO498_18765 PF02378 Phosphotransferase system, EIIC GO498_18770 PF01380 SIS domain GO498_18770 PF01418 Helix-turn-helix domain, rpiR family GO498_18775 PF00313 'Cold-shock' DNA-binding domain GO498_18780 PF00849 RNA pseudouridylate synthase GO498_18785 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) GO498_18790 PF01844 HNH endonuclease GO498_18795 PF05638 Type VI secretion system effector, Hcp GO498_18800 PF04717 Type VI secretion system, phage-baseplate injector GO498_18840 PF15976 CS1-pili formation C-terminal GO498_18840 PF16967 E-set like domain GO498_18845 PF18649 EcpB C-terminal domain GO498_18850 PF16449 Fimbrillin MatB GO498_18870 PF01432 Peptidase family M3 GO498_18875 PF04445 Putative SAM-dependent methyltransferase GO498_18885 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase GO498_18885 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain GO498_18890 PF00582 Universal stress protein family GO498_18895 PF10625 Universal stress protein B (UspB) GO498_18900 PF01384 Phosphate transporter family GO498_18910 PF02678 Pirin GO498_18910 PF17954 Quercetinase C-terminal cupin domain GO498_18915 PF01293 Phosphoenolpyruvate carboxykinase GO498_18920 PF01430 Hsp33 protein GO498_18925 PF01479 S4 domain GO498_18930 PF07095 Intracellular growth attenuator protein IgaA GO498_18935 PF00293 NUDIX domain GO498_18940 PF03180 NLPA lipoprotein GO498_18945 PF17092 Penicillin-binding protein OB-like domain GO498_18945 PF00912 Transglycosylase GO498_18945 PF00905 Penicillin binding protein transpeptidase domain GO498_18965 PF00263 Bacterial type II and III secretion system protein GO498_18965 PF03958 Bacterial type II/III secretion system short domain GO498_18970 PF01202 Shikimate kinase GO498_18975 PF01761 3-dehydroquinate synthase GO498_18980 PF05036 Sporulation related domain GO498_18985 PF02086 D12 class N6 adenine-specific DNA methyltransferase GO498_18990 PF00834 Ribulose-phosphate 3 epimerase family GO498_18995 PF13419 Haloacid dehalogenase-like hydrolase GO498_19000 PF00579 tRNA synthetases class I (W and Y) GO498_19005 PF12323 Helix-turn-helix domain GO498_19005 PF01385 Probable transposase GO498_19005 PF07282 Putative transposase DNA-binding domain GO498_19010 PF01797 Transposase IS200 like GO498_19015 PF03473 MOSC domain GO498_19015 PF03475 3-alpha domain GO498_19020 PF02777 Iron/manganese superoxide dismutases, C-terminal domain GO498_19020 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain GO498_19025 PF16177 Acetyl-coenzyme A synthetase N-terminus GO498_19025 PF13193 AMP-binding enzyme C-terminal domain GO498_19025 PF00501 AMP-binding enzyme GO498_19030 PF04341 Protein of unknown function, DUF485 GO498_19035 PF00474 Sodium:solute symporter family GO498_19040 PF00884 Sulfatase GO498_19045 PF02589 LUD domain GO498_19050 PF11870 Domain of unknown function (DUF3390) GO498_19050 PF13183 4Fe-4S dicluster domain GO498_19050 PF02589 LUD domain GO498_19055 PF02754 Cysteine-rich domain GO498_19080 PF00392 Bacterial regulatory proteins, gntR family GO498_19080 PF07729 FCD domain GO498_19090 PF00294 pfkB family carbohydrate kinase GO498_19095 PF17868 AAA lid domain GO498_19095 PF07728 AAA domain (dynein-related subfamily) GO498_19095 PF12592 Protein of unknown function (DUF3763) GO498_19100 PF05762 VWA domain containing CoxE-like protein GO498_19105 PF03590 Aspartate-ammonia ligase GO498_19110 PF01037 Lrp/AsnC ligand binding domain GO498_19115 PF00258 Flavodoxin GO498_19120 PF01134 Glucose inhibited division protein A GO498_19120 PF13932 GidA associated domain GO498_19125 PF02527 rRNA small subunit methyltransferase G GO498_19130 PF03899 ATP synthase I chain GO498_19135 PF00119 ATP synthase A chain GO498_19140 PF00137 ATP synthase subunit C GO498_19145 PF00430 ATP synthase B/B' CF(0) GO498_19150 PF00213 ATP synthase delta (OSCP) subunit GO498_19155 PF02874 ATP synthase alpha/beta family, beta-barrel domain GO498_19155 PF00306 ATP synthase alpha/beta chain, C terminal domain GO498_19155 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GO498_19160 PF00231 ATP synthase GO498_19165 PF02874 ATP synthase alpha/beta family, beta-barrel domain GO498_19165 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GO498_19170 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain GO498_19170 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain GO498_19175 PF00132 Bacterial transferase hexapeptide (six repeats) GO498_19175 PF12804 MobA-like NTP transferase domain GO498_19180 PF01380 SIS domain GO498_19185 PF00005 ABC transporter GO498_19185 PF08402 TOBE domain GO498_19190 PF00528 Binding-protein-dependent transport system inner membrane component GO498_19200 PF01266 FAD dependent oxidoreductase GO498_19225 PF03606 C4-dicarboxylate anaerobic carrier GO498_19230 PF00440 Bacterial regulatory proteins, tetR family GO498_19230 PF02909 Tetracyclin repressor-like, C-terminal domain GO498_19235 PF13533 Biotin-lipoyl like GO498_19255 PF00577 Outer membrane usher protein GO498_19255 PF13954 PapC N-terminal domain GO498_19255 PF13953 PapC C-terminal domain GO498_19260 PF00577 Outer membrane usher protein GO498_19260 PF13954 PapC N-terminal domain GO498_19260 PF13953 PapC C-terminal domain GO498_19285 PF04076 Bacterial OB fold (BOF) protein GO498_19295 PF00480 ROK family GO498_19305 PF07238 PilZ domain GO498_19305 PF00535 Glycosyl transferase family 2 GO498_19305 PF03552 Cellulose synthase GO498_19310 PF03170 Bacterial cellulose synthase subunit GO498_19315 PF13181 Tetratricopeptide repeat GO498_19315 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) GO498_19325 PF08448 PAS fold GO498_19325 PF00990 Diguanylate cyclase, GGDEF domain GO498_19330 PF00483 Nucleotidyl transferase GO498_19335 PF01270 Glycosyl hydrolases family 8 GO498_19340 PF00884 Sulfatase GO498_19345 PF09106 Elongation factor SelB, winged helix GO498_19345 PF09107 Elongation factor SelB, winged helix GO498_19345 PF00009 Elongation factor Tu GTP binding domain GO498_19345 PF03144 Elongation factor Tu domain 2 GO498_19350 PF12390 Selenocysteine synthase N terminal GO498_19350 PF03841 L-seryl-tRNA selenium transferase GO498_19355 PF04216 Protein involved in formate dehydrogenase formation GO498_19360 PF01292 Prokaryotic cytochrome b561 GO498_19365 PF13247 4Fe-4S dicluster domain GO498_19365 PF09163 Formate dehydrogenase N, transmembrane GO498_19375 PF02634 FdhD/NarQ family GO498_19390 PF00795 Carbon-nitrogen hydrolase GO498_19395 PF03466 LysR substrate binding domain GO498_19395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GO498_19415 PF03544 Gram-negative bacterial TonB protein C-terminal GO498_19430 PF06496 Protein of unknown function (DUF1097) GO498_19435 PF13657 HipA N-terminal domain GO498_19435 PF07804 HipA-like C-terminal domain GO498_19450 PF13610 DDE domain GO498_19465 PF00809 Pterin binding enzyme GO498_19470 PF00893 Small Multidrug Resistance protein GO498_19475 PF01909 Nucleotidyltransferase domain GO498_19475 PF13427 Domain of unknown function (DUF4111) GO498_19480 PF13495 Phage integrase, N-terminal SAM-like domain GO498_19480 PF00589 Phage integrase family GO498_19485 PF02796 Helix-turn-helix domain of resolvase GO498_19485 PF00239 Resolvase, N terminal domain GO498_19490 PF00004 ATPase family associated with various cellular activities (AAA) GO498_19505 PF00580 UvrD/REP helicase N-terminal domain GO498_19505 PF13361 UvrD-like helicase C-terminal domain GO498_19535 PF06122 Conjugative relaxosome accessory transposon protein GO498_19590 PF02899 Phage integrase, N-terminal SAM-like domain GO498_19590 PF00589 Phage integrase family GO498_19595 PF10396 GTP-binding protein TrmE N-terminus GO498_19595 PF12631 MnmE helical domain GO498_19595 PF01926 50S ribosome-binding GTPase GO498_19600 PF02096 60Kd inner membrane protein GO498_19600 PF14849 YidC periplasmic domain GO498_19605 PF01809 Putative membrane protein insertion efficiency factor GO498_19610 PF00825 Ribonuclease P GO498_19615 PF00468 Ribosomal protein L34 GO498_19620 PF00239 Resolvase, N terminal domain GO498_19620 PF02796 Helix-turn-helix domain of resolvase GO498_19635 PF01076 Plasmid recombination enzyme GO498_19640 PF13610 DDE domain GO498_19670 PF13610 DDE domain GO498_19690 PF04055 Radical SAM superfamily GO498_19735 PF07728 AAA domain (dynein-related subfamily) GO498_19735 PF08406 CbbQ/NirQ/NorQ C-terminal GO498_19735 PF12556 Cobaltochelatase CobS subunit N terminal GO498_19785 PF10502 Signal peptidase, peptidase S26 GO498_19810 PF03743 Bacterial conjugation TrbI-like protein GO498_19915 PF10502 Signal peptidase, peptidase S26 GO498_19945 PF00186 Dihydrofolate reductase GO498_19950 PF13427 Domain of unknown function (DUF4111) GO498_19950 PF01909 Nucleotidyltransferase domain GO498_19955 PF00893 Small Multidrug Resistance protein GO498_19960 PF00809 Pterin binding enzyme GO498_19975 PF13610 DDE domain GO498_19980 PF02522 Aminoglycoside 3-N-acetyltransferase GO498_19985 PF01636 Phosphotransferase enzyme family GO498_19995 PF13610 DDE domain GO498_20010 PF02332 Methane/Phenol/Toluene Hydroxylase GO498_20025 PF00809 Pterin binding enzyme GO498_20030 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I GO498_20030 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II GO498_20030 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain GO498_20030 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III GO498_20045 PF03466 LysR substrate binding domain GO498_20045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GO498_20050 PF07690 Major Facilitator Superfamily GO498_20065 PF13610 DDE domain GO498_20075 PF01526 Tn3 transposase DDE domain GO498_20075 PF13700 Domain of unknown function (DUF4158) GO498_20080 PF02796 Helix-turn-helix domain of resolvase GO498_20080 PF00239 Resolvase, N terminal domain GO498_20085 PF11809 Domain of unknown function (DUF3330) GO498_20085 PF00563 EAL domain GO498_20090 PF13495 Phage integrase, N-terminal SAM-like domain GO498_20090 PF00589 Phage integrase family GO498_20095 PF00186 Dihydrofolate reductase GO498_20105 PF01909 Nucleotidyltransferase domain GO498_20105 PF13427 Domain of unknown function (DUF4111) GO498_20110 PF00893 Small Multidrug Resistance protein GO498_20115 PF00809 Pterin binding enzyme GO498_20125 PF13599 Pentapeptide repeats (9 copies) GO498_20130 PF13610 DDE domain GO498_20140 PF01636 Phosphotransferase enzyme family GO498_20150 PF13610 DDE domain GO498_20155 PF01636 Phosphotransferase enzyme family GO498_20160 PF13610 DDE domain GO498_20180 PF00665 Integrase core domain GO498_20185 PF01695 IstB-like ATP binding protein GO498_20200 PF00809 Pterin binding enzyme GO498_20205 PF00893 Small Multidrug Resistance protein GO498_20210 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA GO498_20215 PF03466 LysR substrate binding domain GO498_20215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GO498_20220 PF00144 Beta-lactamase GO498_20235 PF00809 Pterin binding enzyme GO498_20240 PF00893 Small Multidrug Resistance protein GO498_20255 PF13495 Phage integrase, N-terminal SAM-like domain GO498_20255 PF00589 Phage integrase family GO498_20260 PF13610 DDE domain GO498_20265 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GO498_20265 PF00672 HAMP domain GO498_20265 PF12729 Four helix bundle sensory module for signal transduction GO498_20275 PF13401 AAA domain GO498_20275 PF11426 Tn7 transposition regulator TnsC GO498_20280 PF00665 Integrase core domain GO498_20285 PF08721 TnsA endonuclease C terminal GO498_20285 PF08722 TnsA endonuclease N terminal GO498_20290 PF02899 Phage integrase, N-terminal SAM-like domain GO498_20290 PF00589 Phage integrase family GO498_20310 PF01848 Hok/gef family GO498_20320 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system GO498_20325 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin GO498_20330 PF13614 AAA domain GO498_20350 PF05638 Type VI secretion system effector, Hcp GO498_20365 PF00436 Single-strand binding protein family GO498_20375 PF00817 impB/mucB/samB family GO498_20375 PF11798 IMS family HHH motif GO498_20375 PF13438 Domain of unknown function (DUF4113) GO498_20375 PF11799 impB/mucB/samB family C-terminal domain GO498_20380 PF00717 Peptidase S24-like GO498_20415 PF01051 Initiator Replication protein GO498_20430 PF06406 StbA protein